BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB
[Candidatus Liberibacter asiaticus str. psy62]
         (343 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040206|gb|ACT57002.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 343

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD
Sbjct: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ
Sbjct: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK
Sbjct: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS
Sbjct: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM
Sbjct: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG
Sbjct: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343


>gi|23500858|ref|NP_700298.1| flagellar motor protein MotB [Brucella suis 1330]
 gi|163845462|ref|YP_001623117.1| flagellar motor protein MotB [Brucella suis ATCC 23445]
 gi|225628433|ref|ZP_03786467.1| Protein mbhA [Brucella ceti str. Cudo]
 gi|254711223|ref|ZP_05173034.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
 gi|254711824|ref|ZP_05173635.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
 gi|254714893|ref|ZP_05176704.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
 gi|256015903|ref|YP_003105912.1| flagellar motor protein [Brucella microti CCM 4915]
 gi|256030148|ref|ZP_05443762.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
 gi|256059799|ref|ZP_05449994.1| flagellar motor protein MotB [Brucella neotomae 5K33]
 gi|256158327|ref|ZP_05456231.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
 gi|256252739|ref|ZP_05458275.1| flagellar motor protein MotB [Brucella ceti B1/94]
 gi|260166800|ref|ZP_05753611.1| flagellar motor protein MotB [Brucella sp. F5/99]
 gi|261216582|ref|ZP_05930863.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
 gi|261219818|ref|ZP_05934099.1| flagellar motor protein MotB [Brucella ceti B1/94]
 gi|261318815|ref|ZP_05958012.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
 gi|261319452|ref|ZP_05958649.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
 gi|261323779|ref|ZP_05962976.1| flagellar motor protein MotB [Brucella neotomae 5K33]
 gi|261756178|ref|ZP_05999887.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
 gi|265987178|ref|ZP_06099735.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
 gi|265996841|ref|ZP_06109398.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
 gi|23464523|gb|AAN34303.1| chemotaxis motB protein [Brucella suis 1330]
 gi|163676185|gb|ABY40295.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225616279|gb|EEH13327.1| Protein mbhA [Brucella ceti str. Cudo]
 gi|255998563|gb|ACU50250.1| flagellar motor protein [Brucella microti CCM 4915]
 gi|260918402|gb|EEX85055.1| flagellar motor protein MotB [Brucella ceti B1/94]
 gi|260921671|gb|EEX88239.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
 gi|261292142|gb|EEX95638.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
 gi|261298038|gb|EEY01535.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
 gi|261299759|gb|EEY03256.1| flagellar motor protein MotB [Brucella neotomae 5K33]
 gi|261736162|gb|EEY24158.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
 gi|262551138|gb|EEZ07299.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
 gi|264659375|gb|EEZ29636.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
          Length = 366

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|294852974|ref|ZP_06793646.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
 gi|294818629|gb|EFG35629.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
          Length = 366

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEKRQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|306841271|ref|ZP_07473982.1| flagellar motor protein MotB [Brucella sp. BO2]
 gi|306845424|ref|ZP_07477998.1| flagellar motor protein MotB [Brucella sp. BO1]
 gi|306274167|gb|EFM55983.1| flagellar motor protein MotB [Brucella sp. BO1]
 gi|306288673|gb|EFM60004.1| flagellar motor protein MotB [Brucella sp. BO2]
          Length = 366

 Score =  225 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E+ TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|306840141|ref|ZP_07472926.1| flagellar motor protein MotB [Brucella sp. NF 2653]
 gi|306404786|gb|EFM61080.1| flagellar motor protein MotB [Brucella sp. NF 2653]
          Length = 366

 Score =  225 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E+ TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQLGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|254720768|ref|ZP_05182579.1| flagellar motor protein MotB [Brucella sp. 83/13]
 gi|265985826|ref|ZP_06098561.1| flagellar motor protein MotB [Brucella sp. 83/13]
 gi|264664418|gb|EEZ34679.1| flagellar motor protein MotB [Brucella sp. 83/13]
          Length = 366

 Score =  225 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E+ TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSVKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQLGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|161621187|ref|YP_001595073.1| flagellar motor protein MotB [Brucella canis ATCC 23365]
 gi|254702390|ref|ZP_05164218.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
 gi|260568709|ref|ZP_05839178.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|261752951|ref|ZP_05996660.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
 gi|161337998|gb|ABX64302.1| Protein mbhA [Brucella canis ATCC 23365]
 gi|260155374|gb|EEW90455.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|261742704|gb|EEY30630.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
          Length = 366

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S    +  +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++I + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSTRAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|17988498|ref|NP_541131.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. 16M]
 gi|256042871|ref|ZP_05445817.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564108|ref|ZP_05834593.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265989306|ref|ZP_06101863.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984289|gb|AAL53395.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
 gi|260151751|gb|EEW86844.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           16M]
 gi|262999975|gb|EEZ12665.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
          Length = 366

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S       +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLIDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++  + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|254695098|ref|ZP_05156926.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
 gi|261215449|ref|ZP_05929730.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
 gi|260917056|gb|EEX83917.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
          Length = 366

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLV+W+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVLWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S       +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++  + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A    K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|225686890|ref|YP_002734862.1| flagellar motor protein MotB [Brucella melitensis ATCC 23457]
 gi|256261973|ref|ZP_05464505.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642995|gb|ACO02908.1| Protein mbhA [Brucella melitensis ATCC 23457]
 gi|263091457|gb|EEZ15993.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326411308|gb|ADZ68372.1| flagellar motor protein MotB [Brucella melitensis M28]
 gi|326554597|gb|ADZ89236.1| flagellar motor protein MotB [Brucella melitensis M5-90]
          Length = 366

 Score =  222 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVV 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S       +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +     G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAAIGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++  + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|256112172|ref|ZP_05453093.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
 gi|265993598|ref|ZP_06106155.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
 gi|262764468|gb|EEZ10500.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
          Length = 366

 Score =  222 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S       +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S+          + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSSSGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++  + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI +
Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|239834431|ref|ZP_04682759.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
 gi|239822494|gb|EEQ94063.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
          Length = 379

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 159/373 (42%), Gaps = 42/373 (11%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+  Y
Sbjct: 6   ETKREIIIVRRGGHDDHDSHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVASY 65

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FNP       +S     +    +   + + D  I E+ TK   D  +   +++++ Q   
Sbjct: 66  FNPVKLMDRHSSPKGVQDVEEKDGKVRYESDQKI-ENSTKVINDTTVAPPSEQEERQLFR 124

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI----- 183
                LS          + +   + G                 + F P     K      
Sbjct: 125 EPYAVLSELAHETGVLQNQSAKGDGGTSKSGPATGADGGEAYRDPFSPDYWSSKAVEDLT 184

Query: 184 --------------------------------LAMKRKKRLQDLAKKIS----STLSGLV 207
                                            A K+++ + DL K          +   
Sbjct: 185 PPDAAPATPPRPEAAQPKPEEAAKPAEAPADTPAEKQEQLIADLKKAAEGETAKEGTAAK 244

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
               +  V       G++I + D+ +  MF   S+ P    + +L++I +V++     + 
Sbjct: 245 KAEPMPDVTVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQVISRQPGEVI 304

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GHTDA PF++   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K A+DP 
Sbjct: 305 ISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNANDPN 364

Query: 328 NSANRRIDILVED 340
            + NRRIDI ++ 
Sbjct: 365 AAENRRIDIFLKS 377


>gi|153011513|ref|YP_001372727.1| flagellar motor protein MotB [Ochrobactrum anthropi ATCC 49188]
 gi|151563401|gb|ABS16898.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 371

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 34/365 (9%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +   + II+++    D   ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+  Y
Sbjct: 6   ETKREIIIVRRGGHDDHDSHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVASY 65

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FNP       +S     +    +   + + D  I E+ TK   D  +   + +++ Q   
Sbjct: 66  FNPVKLMDRHSSSKGVQDVEEKDGKVRYESDQKI-ENSTKVINDTTVAPPSDQEERQLFR 124

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE------------------ 170
                LS          + +   + G          +                       
Sbjct: 125 EPYAVLSELAHETGVLQNQSAKGDGGTSQSGPATGAEGGEAYRDPFSPDYWSSKAVDDLT 184

Query: 171 -----------ENYFLPPLSKEKILAMKRKKRLQDLAKKIS----STLSGLVADNIVKGV 215
                           P   +    A  +++ + DL K          +       +  V
Sbjct: 185 PPDAAPAAPPKPETAQPKPEETAKPAETQEQLIADLKKAAEGEAAKEGAEAKKAEPMPDV 244

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
                  G++I + D+ +  MF   S+ P    + +L++I +V++     + I GHTDA 
Sbjct: 245 TVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQVISRQPGEVIISGHTDAR 304

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
           PF++   DNWRLS  RA  AY +L++ G+ E R+ ++ G+A  + K ASDP  + NRRID
Sbjct: 305 PFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNASDPNAAENRRID 364

Query: 336 ILVED 340
           I ++ 
Sbjct: 365 IFLKS 369


>gi|83593178|ref|YP_426930.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83576092|gb|ABC22643.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 360

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 17/332 (5%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
           DQ IIIK+        ++ G+WK+ YADF+T +MAFFL++W++N+  ++    I  YF P
Sbjct: 3   DQPIIIKRIKKGGHA-HHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAP 61

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
              +   +  G           +      S    +T     +  G  +     + ++ + 
Sbjct: 62  TAVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASD 121

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                 +      ++   +   GK   + TD + +            ++EK    +  K 
Sbjct: 122 SDDDAGKGEGKGASAGDLEG-LGKLGVEPTDKQLA-----------AAEEKRQQEEFNKT 169

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             +L + I +         +   +L + T  G+ I +ID+    MF   SS  LP T  +
Sbjct: 170 ATELRQAIQAV---PSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDL 226

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  + + +A     ISI GHTDA P+ +     NW LS DRA ++ +VL+ +G+ EDR+ 
Sbjct: 227 LALVAKAVADVPNKISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVD 286

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ G A     +A DP   +NRRI I +   +
Sbjct: 287 RVVGKAETEPLLADDPKAPSNRRIAITLLRDR 318


>gi|62317962|ref|YP_223815.1| flagellar motor protein MotB [Brucella abortus bv. 1 str. 9-941]
 gi|83269939|ref|YP_419230.1| flagellar motor protein MotB [Brucella melitensis biovar Abortus
           2308]
 gi|189023213|ref|YP_001932954.1| flagellar motor protein MotB [Brucella abortus S19]
 gi|237817509|ref|ZP_04596499.1| Protein mbhA [Brucella abortus str. 2308 A]
 gi|254691605|ref|ZP_05154859.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
 gi|254698194|ref|ZP_05160022.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731639|ref|ZP_05190217.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
 gi|256256793|ref|ZP_05462329.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
 gi|260544147|ref|ZP_05819968.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
 gi|260757237|ref|ZP_05869585.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
 gi|260759398|ref|ZP_05871746.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
 gi|260762641|ref|ZP_05874973.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883041|ref|ZP_05894655.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
 gi|297250146|ref|ZP_06933847.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
 gi|62198155|gb|AAX76454.1| MotB, chemotaxis protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940213|emb|CAJ13269.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
 gi|189021787|gb|ACD74508.1| OmpA/MotB domain protein [Brucella abortus S19]
 gi|237787264|gb|EEP61482.1| Protein mbhA [Brucella abortus str. 2308 A]
 gi|260097418|gb|EEW81292.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
 gi|260669716|gb|EEX56656.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
 gi|260673062|gb|EEX59883.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677345|gb|EEX64166.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
 gi|260872569|gb|EEX79638.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
 gi|297174015|gb|EFH33379.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
          Length = 366

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 156/364 (42%), Gaps = 29/364 (7%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT +MAFFLV+W+INA +++TK A+ 
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVLWLINAANEETKAAVA 63

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +S       +  +   + + D  + E  TK   D  +   + +++ Q 
Sbjct: 64  SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183
                  L+          + +   + G     S           + F P     K    
Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182

Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218
                               K+ +  ++L   +    +G  A N            V   
Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G++  + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF+
Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +   DN RLS  RA  AY +L++ G+ E R+ ++ G+A    K  +DP  + NRRIDI +
Sbjct: 303 SATYDNRRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFI 362

Query: 339 EDRQ 342
           + + 
Sbjct: 363 KSKP 366


>gi|89068739|ref|ZP_01156125.1| MotB [Oceanicola granulosus HTCC2516]
 gi|89045702|gb|EAR51764.1| MotB [Oceanicola granulosus HTCC2516]
          Length = 345

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 5/335 (1%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
              Q III++        ++ G WK+ YADFMT +MAFFL+MWII A+D++  + I  YF
Sbjct: 3   SEKQPIIIRRMTEDAHDGHHGGGWKVAYADFMTAMMAFFLLMWIIAASDEEKLRGIADYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI-TKNSVDLKIGSTNQKKQYQRLE 128
            P       A  G+ D +    + ++    +        +N +++    T +        
Sbjct: 63  TPSLVTADGAGSGLLDGEAVEGQGTRGGGVVPELPSFGQENPLEISANRTPEAPSVIVEY 122

Query: 129 NNIFYLSNSQQSE-HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
             +  L +   +  H       D E        +  E S  +              LA +
Sbjct: 123 VPVEDLGDDPFARLHAAAGEVVDGETTPLDGAGSAPEASEGEAGTAASEAALAAAELAEQ 182

Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           R   L+ L  ++   ++         + +L + T  G+   I+D     MF   S+    
Sbjct: 183 RAAALEVLRGEVEERIAEDPELATFAENLLVDATDLGLRFQIVDHEGVAMFRSGSAEIEE 242

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304
            T  ++  +GE +      ++I GHTD+ PF        NW LS DRA +A + L+ +GV
Sbjct: 243 STRELIGVVGETIRGLPYPVAITGHTDSVPFSGARDGYSNWELSADRANAARRTLIAAGV 302

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              RI +ISG A   L++   P    NRRI++L++
Sbjct: 303 DAARIVEISGLAATELRVPDIPDAPENRRIEVLMQ 337


>gi|323139665|ref|ZP_08074707.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
 gi|322395097|gb|EFX97656.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
          Length = 351

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 153/345 (44%), Gaps = 13/345 (3%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N   III+KK    D  ++ G WK+ +ADFMT +MAFFLVMW+IN+T  +TK  I QYF
Sbjct: 5   HNGSPIIIRKKRGDGDEDHHGGVWKLAFADFMTAMMAFFLVMWLINSTSKETKAVIVQYF 64

Query: 70  NPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           NP    +   A KG+ D +   +  S  K D        ++         +  K    + 
Sbjct: 65  NPVQLIDSNPAHKGMRDPKQTGQGKSLQKADDVKTTQEAESKDKDSALHKDPIKTLDEIA 124

Query: 129 NNIFYLSNSQQSEHCK-----------NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                 + +  +E              + + + +   +   KS   E  +   +     P
Sbjct: 125 KREPPPTTADGAESSPKVGAMTPRDPFDRVAKSASPPQGAAKSAQEENKVESPKKDSHAP 184

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPM 236
                    K K     L  ++   ++      +       +    G+LI++ D  N  M
Sbjct: 185 SVTPAEQGEKAKASAAALQAELEKIVNQEARGAHAAPKTEVKQADEGVLITLTDDANFSM 244

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  S  P P+ + ++ +IG+VLA  T  I +RGHTD   + + + DNWRLS DRA    
Sbjct: 245 FEVGSIEPKPQLVRIIGQIGKVLAKKTGEIEVRGHTDGRSYTSKSYDNWRLSSDRATVVN 304

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +L++ G+   R+ KI G A   LK   DP+   NRRI+IL+   
Sbjct: 305 YMLIRGGLPPARVGKIVGMADRHLKTPKDPLAPVNRRIEILLRGD 349


>gi|304392497|ref|ZP_07374437.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
 gi|303295127|gb|EFL89487.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
          Length = 364

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 32/363 (8%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
              +N+Q III ++  I +  ++ G+WKI +ADFMT +MA FLV+W+INA +++TKK++ 
Sbjct: 2   NTADNEQPIIIVRRNRIAEDGHHGGAWKIAFADFMTAMMALFLVLWLINAANEETKKSVA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPP-----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            YFNP        SK    +   P     E +         D+  T        G+   K
Sbjct: 62  SYFNPVKLVDRNRSKKGIWKSAGPSIETGEETEAGTDTQPEDKDSTSGPASSGAGADGSK 121

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLT-------------------------RDSEKGKD 156
           ++ + + +    L     +E    +                            + E   D
Sbjct: 122 REAEFIADPFSELEEIASAERENMAAKTAAVGMAGDEESDAIRDPFSPVYWKPEPETPTD 181

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                  E+   + E         E            D+ K++ + ++  V D     + 
Sbjct: 182 EITPIRAEEEKPQPEITSEVSADDEAAREETDDAGASDVLKELKAAVAKAVDDG--PRLD 239

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              T  G+LISI D  +  MF+  SS+P    ++ +  + +VL+     + I GHTDA P
Sbjct: 240 VTPTPDGLLISITDDFDFAMFETGSSVPSGRLVLAMDAVAQVLSERPGKLHIHGHTDARP 299

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           FR   RDNW LS  RA+SA  +L++ G  E RI +ISGFA  RLK+  +P  ++NRRI++
Sbjct: 300 FRGGERDNWTLSSARAHSARYMLLRGGFGEKRIVEISGFADRRLKLVDEPDAASNRRIEL 359

Query: 337 LVE 339
           L+E
Sbjct: 360 LLE 362


>gi|319409174|emb|CBI82818.1| putative flagellar motor protein MotB [Bartonella schoenbuchensis
           R1]
          Length = 396

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             +  Q + + II+++    D   ++ G+WKI YADF+T +MAFFLVMW++NA D++T++
Sbjct: 2   KSEDEQSHSEIIIVRRGGHDDHDEHHGGAWKIAYADFVTAMMAFFLVMWLVNAKDEETRE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI------------TKNSV 111
           AI  YFNP        S     ++N  E      +  +                 T+   
Sbjct: 62  AIANYFNPIKLTDSQTSSRSIQKKNDVEDDKICPVGQTCGGDSKSENVQLVSLEETELMR 121

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           D   G     +  Q ++N      +  + E    +   DS++   +    D       +E
Sbjct: 122 DPYSGLDKIVQSQQNVQNMQSLPDSDGKHETLMGNSKGDSKENLPVTDYRDPFSPHYWKE 181

Query: 172 NYFLP--------------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
           N                     ++        +  +D AK+++  +  +  +N +     
Sbjct: 182 NVASHNNTLNAQGIEWKEGQAQQQLAQEDAPSQESRDFAKELADLIKEITDENHLS-ASV 240

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
              R G++I ++DQ    MF   SS+P  +T+  + +I +V+A     + + GHTDA P+
Sbjct: 241 LPIREGVMIELMDQPEYEMFKVGSSVPTAQTVEFIDRIAKVIAKHPGNVVVGGHTDARPY 300

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           R+  RDNW+LS  RA   Y +L++ G+ E RI ++ G+A   LK   DP  S NRR  I 
Sbjct: 301 RSTTRDNWQLSTSRAQMVYYMLVRGGLDEKRILRVEGYADRNLKNKQDPYASENRRTSIF 360

Query: 338 VEDRQ 342
           V D  
Sbjct: 361 VRDPN 365


>gi|254497974|ref|ZP_05110737.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
 gi|254352751|gb|EET11523.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
          Length = 293

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 64/345 (18%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+ + +  +E  Q IIIKK        ++ GSWKI YADF+T +MAFFL+MW+I + +  
Sbjct: 1   MSENENSAKEKSQPIIIKKVKKHGHA-HHGGSWKIAYADFVTAMMAFFLLMWLIASLNKA 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            ++ I +YF    K      K +                   ++ I      L+I  TN 
Sbjct: 60  QREGIAEYFKQPIKVTFFGGKDV------------------GNQQIRVKGGGLQIEDTNG 101

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +    ++ ++                                             P   +
Sbjct: 102 QVSTTKMNDSKD-----------------------------------------AKPQDIE 120

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
               +  + ++L++L  +I+ ++    + + +   +L E    G+ I +ID +  PMFD 
Sbjct: 121 VIQSSQTQTQKLEELKSEINLSIQNDPSLNGLKDRMLMEVVHDGLRIQLIDNQKNPMFDV 180

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAY 296
            S    P+   +  KI ++L      ++I+G+TDA P+ N       NW LS  RA +A 
Sbjct: 181 GSEKLNPQFEPIFTKISKLLNGVPNKVTIQGYTDAHPYHNPDELEYTNWELSTQRANAAR 240

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + L+K+G+ E+++ K+SGF+        DP N+ NRRI I+V   
Sbjct: 241 RALIKAGLDENKVMKVSGFSSTMPLDKKDPFNAINRRISIIVMKP 285


>gi|114765236|ref|ZP_01444368.1| OmpA/MotB [Pelagibaca bermudensis HTCC2601]
 gi|114542371|gb|EAU45399.1| OmpA/MotB [Roseovarius sp. HTCC2601]
          Length = 329

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 18/331 (5%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N+Q I+IK+    D   ++ G+WK+ YADFMT +MAFFL++WI+ A+D++  + +  YF
Sbjct: 4   NNEQPIVIKRIEEDDGHGHHGGAWKVAYADFMTAMMAFFLLLWILAASDEEKLRGLADYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P          G+ D     +    +  D                G     +     + 
Sbjct: 64  TPSLSQSGGRGDGLLDGTVLADDGVMSGTD----------------GPATPVQLPSFGQE 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N   + +S+  +   N       + +   +S  + +  +  E       ++         
Sbjct: 108 NPLAVFDSRLRDTNPNIQVEYDTRPEGRQESATINEGSDPMETARAQVAAERAQQEWDEA 167

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +   +  + +   +     ++    + F+ T  G+ I I+D+    MF   S+     T 
Sbjct: 168 QERLE-QQIMQEVVGSPELESYSDNLRFDRTENGLEIQIVDKSGESMFATGSARIQDRTR 226

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L+ I + +      ++I GHTD+ P+ R     NW LS DRA +  +VLM +GVS +R
Sbjct: 227 DLLRIIADAVVELPNELTISGHTDSVPYTRAATYSNWELSADRANATRRVLMANGVSPER 286

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           I++ISG A         P    NRRI + V+
Sbjct: 287 ITRISGLADTEPLNPGSPDAPENRRISVTVQ 317


>gi|15964427|ref|NP_384780.1| flagellar motor protein MotB [Sinorhizobium meliloti 1021]
 gi|307311569|ref|ZP_07591210.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
 gi|15073604|emb|CAC45246.1| Chemotaxis (motility protein B) transmembrane [Sinorhizobium
           meliloti 1021]
 gi|306899586|gb|EFN30215.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
          Length = 394

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 111/397 (27%), Positives = 176/397 (44%), Gaps = 57/397 (14%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN   + N +N+  III ++ A     ++ G WKI YADFMT +MAFFLVMW+INA +++
Sbjct: 1   MNDESNHNGKNE--IIIVRRSADSHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58

Query: 61  TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           TK AI  YFNP        +        K    EQ         +   S     T + + 
Sbjct: 59  TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158
              G   +       EN    LS   +    + +++   + G                  
Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178

Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186
                                           ++       +K E        + +  A 
Sbjct: 179 PFDPDFWTKQVEVKDAGNTAESDVASAANSAREAASGPGVPDKAEGAKAADAPENQAPAE 238

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             +K  + L  +I   L G     +++G+       G+L++I +Q + PMF   S++P  
Sbjct: 239 NPQKEAEALKAEIEKELGGGA-GRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E ++ ++KIG +LA     +++RGHTD  PF++   DNWRLS  RA SAY +L++ G+ E
Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           +R+ +ISGFA  RL++ +D    ANRRI+IL++  QG
Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394


>gi|2275156|gb|AAB81408.1| MotB [Sinorhizobium meliloti]
          Length = 394

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 112/397 (28%), Positives = 178/397 (44%), Gaps = 57/397 (14%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN   + N +N+  III ++ A     ++ G WKI YADFMT +MAFFLVMW+INA +++
Sbjct: 1   MNDESNHNGKNE--IIIVRRSADSHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58

Query: 61  TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           TK AI  YFNP        +        K    EQ         +   S     T + + 
Sbjct: 59  TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158
              G   +       EN    LS   +    + +++   + G                  
Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178

Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186
                                           ++    +  +K E        + +  A 
Sbjct: 179 PFDPDFWTKQVEVKDAGNTAESEVASAANSAREAASAPEVPDKAEGAKAADAPENQAPAE 238

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             +K  + L  +I   L G  A  +++G+       G+L++I +Q + PMF   S++P  
Sbjct: 239 NPQKEAEALKAEIEKEL-GGEAGRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E ++ ++KIG +LA     +++RGHTD  PF++   DNWRLS  RA SAY +L++ G+ E
Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           +R+ +ISGFA  RL++ +D    ANRRI+IL++  QG
Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394


>gi|307318924|ref|ZP_07598355.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306895338|gb|EFN26093.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
          Length = 394

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 111/397 (27%), Positives = 178/397 (44%), Gaps = 57/397 (14%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN   + N +N+  III ++ A +   ++ G WKI YADFMT +MAFFLVMW+INA +++
Sbjct: 1   MNDESNHNGKNE--IIIVRRSADNHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58

Query: 61  TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           TK AI  YFNP        +        K    EQ         +   S     T + + 
Sbjct: 59  TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158
              G   +       EN    LS   +    + +++   + G                  
Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178

Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186
                                           ++    +  +  E        + +  A 
Sbjct: 179 PFDPDFWTKQVEVKDAGNTAERDVASAANSAREAASAPEVPDNAEGAKAADAPENQAPAE 238

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             +K  + L  +I   L G  A  +++G+       G+L++I +Q + PMF   S++P  
Sbjct: 239 NPQKEAEALKAEIEKEL-GGEAGRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E ++ ++KIG +LA     +++RGHTD  PF++   DNWRLS  RA SAY +L++ G+ E
Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           +R+ +ISGFA  RL++ +D    ANRRI+IL++  QG
Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394


>gi|288962674|ref|YP_003452968.1| chemotaxis protein [Azospirillum sp. B510]
 gi|288914940|dbj|BAI76424.1| chemotaxis protein [Azospirillum sp. B510]
          Length = 347

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 147/340 (43%), Gaps = 11/340 (3%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
             II+K+ +   D   + G+WK+ YADF+T +M FFLVMW++N T  + +K I  YFNP 
Sbjct: 8   PPIIVKRHLGSHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYFNPV 67

Query: 73  GKNL-MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             +   + + G+   ++  +  S    + + D+     S  +     +  +Q    ++ +
Sbjct: 68  AVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRKDPM 127

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK- 190
            +                +S  G    +    + +         P  ++ ++ A+  ++ 
Sbjct: 128 PHPPGGTVPPVDLLRPASESAPGAPATEPPAPQMAPQMAPQASAPQATRAELEALLERQS 187

Query: 191 -------RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                   L+ L + +   ++     + +   ++ +    G+ + + DQ    MF   S+
Sbjct: 188 SELGEKVALESLERDLRQRIAASPDLNALQGSLVIQQVPEGLRVQLTDQARFSMFKVGSA 247

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMK 301
               +   +++ +   LA     I I GHTD   +   A+  NW LS DRA +A + L+ 
Sbjct: 248 QMNDQGRRLMRMVASALAAVPNPIGITGHTDGLGYAADAKYGNWELSSDRANAARRELIA 307

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           SG+   RI ++ G A      A  P++ +NRRI I +  R
Sbjct: 308 SGIPNTRIVRVEGRADLDHFGAGGPLDPSNRRISITLLRR 347


>gi|209964663|ref|YP_002297578.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
 gi|209958129|gb|ACI98765.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
          Length = 364

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/314 (22%), Positives = 143/314 (45%), Gaps = 3/314 (0%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG-KNLMTASKGIFDEQNPP 90
           +WK+ YADF+T +MAFFL++W++N T  + K+ I  YF+P       + + G+   Q   
Sbjct: 28  AWKVAYADFVTAMMAFFLLLWLLNVTTSEQKQGIADYFSPASPSKQESGAGGVLGGQTIT 87

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
              ++          +   S+     S  Q + +          +  +  +         
Sbjct: 88  VPGAKINQSSPPQLTVPVPSMPASANSEEQVEDFDSSTKGRPDGTQDKVGQGEAGDSGGP 147

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVAD 209
            +   D  +     +  +K  +  +     ++ LA   +++ Q  A+++   +       
Sbjct: 148 GDSRLDALEKAGEIRQADKNRDGKIDEKELKEALAKLEQEQFQRTAQELRQAIQQVPELR 207

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
            + + ++ + T  G+ I ++DQ    MF   S+  LP+T  ++  + + +      +S+ 
Sbjct: 208 ELSQNLVIDNTPEGLRIQLVDQEGYSMFPSGSANMLPQTAQLMALVAQAVGKLPNHLSVS 267

Query: 270 GHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHTD++PF    +R NW LS +RA ++ + L+ +GV E+RI +++G A        DP +
Sbjct: 268 GHTDSTPFAAGSSRSNWDLSTERANASVRALLAAGVPENRIDQVTGRADRDHLFPDDPRS 327

Query: 329 SANRRIDILVEDRQ 342
             NRR+ I++   Q
Sbjct: 328 PRNRRVSIVLLREQ 341


>gi|23013133|ref|ZP_00053071.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 344

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 20/336 (5%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E  Q IIIK+   +     + G+WK+ YADF+T +MAFFL++W++NA  ++    +  YF
Sbjct: 3   EGGQQIIIKRVKKVA-GGAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSNYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P   +  ++  G           +Q     S           +  G  +     +   +
Sbjct: 62  APTMASKSSSGAGGLLGGKVIGEGAQTSNTSSPSLVQHLPPASIGPGGEDLTGSKEFESD 121

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N    +        + +     +       S                    ++  A + +
Sbjct: 122 NPSESNQGPGQGAGQGAGQGPGQGKDRSGMSEQEF----------------KEAQAQREQ 165

Query: 190 KRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++     + +   + G          +L + T  G+ I I DQ    MF   SS P   T
Sbjct: 166 QKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPFGHT 225

Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L  +  V+       I+I GHTDA PFR+     NW LS DRA +  + L+ SGV E
Sbjct: 226 RAMLDLVSRVVRQLPDNRIAISGHTDAVPFRDPSGYTNWELSADRALATRRALIASGVPE 285

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            RI +I G A       +DP    NRRI I++    
Sbjct: 286 GRIDRIVGRADQEPLDKADPKGLRNRRISIILLREN 321


>gi|148260894|ref|YP_001235021.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146402575|gb|ABQ31102.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
          Length = 371

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 14/340 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FG 73
           +I ++  I +  ++ G+WK+ YADF+T +MAFFL+MW+INAT +  +  +  YF+     
Sbjct: 18  LIIRREEIVEGGHHGGAWKVAYADFVTAMMAFFLLMWLINATTEAQRVGLADYFSQANVL 77

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
               +     F    P ++ + +    ++   +  N V  ++  T Q +Q +        
Sbjct: 78  NRAASGEGKPFGGSTPFDKGALSSDRGAVRVTVGHNPVSYQVPHTPQGQQIRPDHPTGND 137

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR----- 188
           + N+      K   +  +        + +L+K  +        P  ++            
Sbjct: 138 MVNTSPGAGHKPRASGATASNAAPKPAPELQKPASPAAGARSAPSGEKAAAGTGGAIGGL 197

Query: 189 ------KKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                 + R +    +I   ++      ++ K V    T  G+ I I+D    PMF   S
Sbjct: 198 APGNLGEARFRTAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGS 257

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           + P P T+ +L KI  +L+   + I I G+TDA P+    +DNW LS++RA +   VL+K
Sbjct: 258 ARPNPMTLELLTKIAPILSRLGDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVK 317

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +G  +  I+++SG+A  +L I S+P+ +ANRR+ ILV   
Sbjct: 318 AGFPKRLIARVSGYADRKLLIPSNPLAAANRRVGILVVRP 357


>gi|296447981|ref|ZP_06889887.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
 gi|296254491|gb|EFH01612.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
          Length = 381

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 156/377 (41%), Gaps = 43/377 (11%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             ++  + I I+K     +  ++ G+WKI +ADFMT +MAFFLVMWIIN+T  +TK AI 
Sbjct: 2   SEEKEAEIIFIRKNHGDHEEGHHGGAWKIAFADFMTAMMAFFLVMWIINSTSKETKAAIV 61

Query: 67  QYFNPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           QYFNP    +   A KG+ D ++  +  S+     +  EH        K     +     
Sbjct: 62  QYFNPVQLVDSNPAHKGLRDPKDGGQGKSEKPTAATQKEHSGAAPESDKDAPQREAALLF 121

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
                +  ++    ++  +                  +       E    P  + E   A
Sbjct: 122 DPITTLDEIAGPGNTKEGQTEQAPPIFGDPFDRSGRGVGYVEPHVEESGSPDKASETERA 181

Query: 186 MKRKKRLQDLAKKISSTL------------------------------------------ 203
            +R K         + T+                                          
Sbjct: 182 EERAKPASSTPPTSAKTMTRQQRQAAATAAADEKAKAEEKAKAEAAQLAATRAAVDRIAK 241

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +          V    T  G+LIS+ D  N  MF   S  P P+ + ++ +I  VLA   
Sbjct: 242 AESANAQPGPHVEVTETAEGLLISLTDDANFSMFAIGSVKPKPQLVRIVGQIAGVLAKQP 301

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             + +RGHTDA  +++   DNWRLS DRA  AY +L++ G++E R+ KI+G+A   LK  
Sbjct: 302 GEVELRGHTDARSYKSKVYDNWRLSADRANMAYYMLLRGGLAEKRVVKIAGYADRNLKAQ 361

Query: 324 SDPMNSANRRIDILVED 340
            +P+ + NRRI+ILV  
Sbjct: 362 KEPLAAVNRRIEILVRK 378


>gi|121602153|ref|YP_989388.1| putative flagellar motor protein MotB [Bartonella bacilliformis
           KC583]
 gi|120614330|gb|ABM44931.1| putative flagellar motor protein MotB [Bartonella bacilliformis
           KC583]
          Length = 357

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 19/357 (5%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             +    + + II+++    D   ++ G WKI YADFMT +MA FLVMW++NA D++ K 
Sbjct: 2   KSEDQHTHSEIIIVRRGGHDDHDDHHGGVWKIAYADFMTAMMALFLVMWLVNAKDEEEKA 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ--- 120
            I  YFNP        +     +QN  E ++   +D +  E     +  L +    +   
Sbjct: 62  VIANYFNPIKLVDHETTIRGV-KQNDAEDNNTPSVDPTRREEAQSENGQLNLTEEAELMR 120

Query: 121 --------------KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                           Q Q  +N     S  Q++   + +     +       +   + +
Sbjct: 121 DPYTGLEKIVDAKRTMQDQSDKNAENSTSMEQENGDSRENSKVGIDYYDPFSLNYWKQAA 180

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            +       P   ++        +   D AK+++  +   V D+    V  E  + G++I
Sbjct: 181 SDALVKAETPLAFQKLAQENFPSQESIDFAKELTEFMKETVNDH-HVSVYVEPIKEGVII 239

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            ++DQ    MF   SS+P  ET+ V+ ++ +++A     + I GHTD+ P+R+  RDNW+
Sbjct: 240 ELMDQPQREMFRVGSSLPTAETVEVIGEMAKIIAKHQGDVIISGHTDSRPYRSANRDNWQ 299

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           LS  RA  AY +L++ G+ E RI ++ G+A   LK  +DP  + NRRI I + +  G
Sbjct: 300 LSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKADPYAAENRRISIFIRNPNG 356


>gi|326404291|ref|YP_004284373.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
 gi|325051153|dbj|BAJ81491.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
          Length = 371

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 14/340 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FG 73
           +I ++  I +  ++ G+WK+ YADF+T +MAFFL+MW+INAT +  +  +  YF+     
Sbjct: 18  LIIRREEIVEGGHHGGAWKVAYADFVTAMMAFFLLMWLINATTEAQRVGLADYFSQANVL 77

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
               +     F    P ++ + +    ++   +  N V  ++  T Q +Q +        
Sbjct: 78  NRAASGEGKPFGGSTPFDKGALSSDRGAVRVTVGHNPVSYEVPHTPQGQQIRPDHPTGND 137

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR----- 188
           + N+      K   +  +        + +L+K  +        P  ++            
Sbjct: 138 MVNTSPGAGHKPRASGATASNAAPKPAPELQKPASPAAGARSAPSGEKAAAGTGGAIGGL 197

Query: 189 ------KKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                 + R +    +I   ++      ++ K V    T  G+ I I+D    PMF   S
Sbjct: 198 APGNLGEARFRTAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGS 257

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           + P P T+ +L KI  +L+   + I I G+TDA P+    +DNW LS++RA +   VL+K
Sbjct: 258 ARPNPMTLELLTKIAPILSRLGDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVK 317

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +G  +  I+++SG+A  +L I S+P+ +ANRR+ ILV   
Sbjct: 318 AGFPKRLIARVSGYADRKLLIPSNPLAAANRRVGILVVRP 357


>gi|83311678|ref|YP_421942.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
 gi|82946519|dbj|BAE51383.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
          Length = 344

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 130/336 (38%), Gaps = 20/336 (5%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E  Q IIIK+   +     + G+WK+ YADF+T +MAFFL++W++NA  ++    +  YF
Sbjct: 3   EGGQQIIIKRVKKVA-GGAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSNYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P   +  ++  G           +Q     S           +  G  +     +    
Sbjct: 62  APTMASKSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEFAPE 121

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N    S        +       +       S                    ++  A + +
Sbjct: 122 NEGDSSLGPGKGAGQGEGQGAGQGKDRSGMSEQEF----------------KEAQAQREQ 165

Query: 190 KRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++     + +   + G          +L + T  G+ I I DQ    MF   SS P   T
Sbjct: 166 QKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHT 225

Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L  +  V+       I+I GHTDA PFR+     NW LS DRA +  + L+ SGV E
Sbjct: 226 RAMLDLVSRVVRQLPDNRIAISGHTDAIPFRDPSGYTNWELSADRALATRRALIASGVPE 285

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            RI +I G A       +DP    NRRI I++    
Sbjct: 286 GRIDRIVGRADQEPLDKADPKGLRNRRISIILLREN 321


>gi|170727809|ref|YP_001761835.1| flagellar motor protein MotB [Shewanella woodyi ATCC 51908]
 gi|169813156|gb|ACA87740.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 322

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 121/327 (37%), Gaps = 22/327 (6%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   D  P     W   +AD M++LM FF+++   +  D    K I              
Sbjct: 3   KQKCDCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K  F  QN  E     K    I         +     T  ++  +  E  I Y +    
Sbjct: 53  -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIETITQQTSEITEPVIEYQAGEDD 111

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           S             G+    + +   + +  ++       +E       ++ + +  KK+
Sbjct: 112 SSGGSQKQQGQQRGGESSATAQEQSVAQSSSDSESEAKAKEESDAQAAAQENINEQVKKM 171

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+  + D     +  E+    I+I I ++     F   S    P    V++++GE+L
Sbjct: 172 AQELNTEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVVRRVGELL 225

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
                ++++ GHTD     N     NW LS  RA +    L+K  G    R+  + G A+
Sbjct: 226 KDVPGIVTVSGHTDDMNISNELYSSNWDLSSKRAVAVAHELIKVKGFDPQRMK-VVGMAN 284

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
               +A+D     + NRR++I +E  +
Sbjct: 285 SDPLVANDTSSHRARNRRVEIAIEQGK 311


>gi|167571659|ref|ZP_02364533.1| flagellar motor protein MotB [Burkholderia oklahomensis C6786]
          Length = 340

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   ++ G+T +      L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSIEAGATRRTDGSTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + I   S  +     + SL R                                     + 
Sbjct: 110 DRIVKKSEDEALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QARLHDLQVKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|209963560|ref|YP_002296475.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
 gi|7025363|gb|AAF35851.1|AF220005_2 lateral flagellar motor protein MotB [Rhodospirillum centenum]
 gi|209957026|gb|ACI97662.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
          Length = 325

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/333 (23%), Positives = 134/333 (40%), Gaps = 26/333 (7%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q +I ++     D     G+WKI YADF+T +MAFF+++W++N T  + +  I  YFN
Sbjct: 7   KPQIVIKRRAQEESDELEGNGTWKIAYADFVTAMMAFFMLLWLVNVTTPEQRHGIADYFN 66

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +   +            R      + +        +    +      ++       
Sbjct: 67  PIAVSDANSGANGQLAGQSVAREGALTSNAASAWETIPTARVPTLSPPGPDRELD----- 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                              D E G    +        +         L ++       ++
Sbjct: 122 -------------------DGEGGGASAQENAESAPADGNGTPMTAALEQQLQQVAAEEQ 162

Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
               + + +   L   V   ++ + ++FE T  G+ I I D+ +  MFD  ++      +
Sbjct: 163 SFDRIEQSVRDALMSAVDLADLSQNLVFERTADGLRIQITDRPHFSMFDSGATDLNGRAV 222

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + E L+     I+I GHTD  PF   AR  NW LS DRA +A +VL++ G+   R
Sbjct: 223 TLLGIVAEALSGVPNRIAISGHTDGRPFAANARYGNWELSADRANAARRVLLQKGIQPGR 282

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++++ G A     +  DP +  NRRI I+V  R
Sbjct: 283 VARVEGLADTLHLLPEDPGDPRNRRISIIVMRR 315


>gi|114797285|ref|YP_758982.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
 gi|114737459|gb|ABI75584.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
          Length = 287

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 52/335 (15%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           +       IIK+K       ++ G+WK+ YADF+T +MAFFL+MW++NAT ++ +K I  
Sbjct: 4   DSSVQGPTIIKRKKVYKADGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEEQRKGIAD 63

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YFNP       +  G          S      +    +  +   +               
Sbjct: 64  YFNPTIPISRISGGGSDGLNGSSIFSEDTYAKMGTGANRKETVENP-------------- 109

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                                    K ++        + +    
Sbjct: 110 ------------------------------------AYGDGKTKDAQDQTEDVDTLAKQA 133

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            +K++ D  + +  +LS      + + ++ + +  GI++ I D  +TP+F    S P   
Sbjct: 134 EEKQIADELQGLKESLSAESRQ-LSEHLMIKMSPEGIVLEITDSESTPLFPLGRSEPSET 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306
            + ++  + E  A     I I GHTD+  +RN A  DNW LS DRA +A ++L ++ +  
Sbjct: 193 MVQLIDVVAESFAEFDNDIKIVGHTDSHRYRNGAIYDNWNLSADRANAARRLLSRADIPS 252

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           DRI ++SG A     +  DP  + NRRI I +   
Sbjct: 253 DRIREVSGKADTDPLVKDDPQAAQNRRISITILTD 287


>gi|150395498|ref|YP_001325965.1| flagellar motor protein MotB [Sinorhizobium medicae WSM419]
 gi|150027013|gb|ABR59130.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
          Length = 397

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 106/400 (26%), Positives = 173/400 (43%), Gaps = 60/400 (15%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+     +      III ++ A     ++ G WKI YADFMT +MAFFLVMW+INA +++
Sbjct: 1   MSDES--HHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           TK AI  YFNP        ++    +     +  + +    +D   TK+    K G    
Sbjct: 59  TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLT 118

Query: 121 KKQYQRLEN------------------------NIFYLSNSQQSEHCKNSLTRDSEKGKD 156
               +  +                         NI    +   +E   ++     E  +D
Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAESGPSTGAAGGEAYRD 178

Query: 157 LCKS---------------------------------TDLEKSINKEENYFLPPLSKEKI 183
                                                 +   +   +        ++ + 
Sbjct: 179 PFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEA 238

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A  R++  + L  +I   L G     +   V       G+L++I +Q + PMF   S++
Sbjct: 239 AAEDRQQEAEALKAEIERELGGEAGRLLEGLV-VAPAEGGLLVTISEQTDAPMFAVGSAV 297

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P  E ++ ++KIG +LA     +++RGHTD  PF++   DNWRLS  RA SAY +L++ G
Sbjct: 298 PQKELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGG 357

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           + E+R+ +ISGFA  RL++ +DP   ANRRI+IL++  QG
Sbjct: 358 LKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG 397


>gi|83721243|ref|YP_443678.1| flagellar motor protein MotB [Burkholderia thailandensis E264]
 gi|167582718|ref|ZP_02375592.1| flagellar motor protein MotB [Burkholderia thailandensis TXDOH]
 gi|83655068|gb|ABC39131.1| chemotaxis protein MotB [Burkholderia thailandensis E264]
          Length = 344

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   +  G+T        L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDSSIIKGGGRDISSVDAGTTRLTDGSTHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   S        + SL R                                     + 
Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QIRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|312115287|ref|YP_004012883.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311220416|gb|ADP71784.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 358

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 91/358 (25%), Positives = 155/358 (43%), Gaps = 17/358 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M  H  KN+     I+++KK+   D  N+ G WKI YADFMT +M FFLVMW++N++  +
Sbjct: 1   MARH-KKNERAHADIVVRKKLYRSDGDNHGGVWKIAYADFMTAMMTFFLVMWLVNSSSKE 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL-------------SIDEHIT 107
               I  YFNP   N             P  +                       +E +T
Sbjct: 60  RLSQIANYFNPVKLNEHAPPAKDVAATAPKAQDKSPAAGRPNSAVVDPKDRHVFSEEELT 119

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
           +N   +      Q ++  R+ +     S +         +            ++   ++ 
Sbjct: 120 RNPFGVLTQLATQAEEALRIASKEQDSSAAAGQLSRDPFVAEPRLVRTAKVSTSSGSQTA 179

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV---ADNIVKGVLFETTRTGI 224
             E +          +   +RK+    LA++I   +         +    V       G 
Sbjct: 180 PGEWSDAPKSHKSANVAETERKEPAASLAEQILKDIESFQSNLPQSFRVQVSVAGVAEGT 239

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           LIS++D     MFD  S++P P+T++V+ +IG++++     I IRG+TD  PF      N
Sbjct: 240 LISLMDDTKRSMFDVGSAMPKPDTVLVMTRIGDIISKYPGKIIIRGYTDGRPFAGDRYGN 299

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           W LS  RA  A+ +L +  + + R+  I G+A  + + A DP+   NRRI++L++D +
Sbjct: 300 WVLSSQRARMAFLMLARGKIGDGRVLSIEGYADRQPRNADDPLAPENRRIEVLLKDSE 357


>gi|167620832|ref|ZP_02389463.1| flagellar motor protein MotB [Burkholderia thailandensis Bt4]
          Length = 348

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   +  G+T        L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDSSIIKGGGRDISSVDAGTTRLTDGSTHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   S        + SL R                                     + 
Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QIRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|167564510|ref|ZP_02357426.1| flagellar motor protein MotB [Burkholderia oklahomensis EO147]
          Length = 340

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   ++ G+T +      L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSIEAGATRRTDGSTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + I   S  +     + SL R                                     + 
Sbjct: 110 DRIVKKSEDEALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|53720918|ref|YP_109904.1| flagellar motor protein MotB [Burkholderia pseudomallei K96243]
 gi|167817882|ref|ZP_02449562.1| flagellar motor protein MotB [Burkholderia pseudomallei 91]
 gi|52211332|emb|CAH37321.1| chemotaxis protein MotB [Burkholderia pseudomallei K96243]
          Length = 340

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   L  G+T +      L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   S        + SL R                                     + 
Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|76809964|ref|YP_331496.1| flagellar motor protein MotB [Burkholderia pseudomallei 1710b]
 gi|126438376|ref|YP_001060851.1| flagellar motor protein MotB [Burkholderia pseudomallei 668]
 gi|126452767|ref|YP_001068158.1| flagellar motor protein MotB [Burkholderia pseudomallei 1106a]
 gi|134281430|ref|ZP_01768138.1| chemotaxis protein MotB [Burkholderia pseudomallei 305]
 gi|167721693|ref|ZP_02404929.1| flagellar motor protein MotB [Burkholderia pseudomallei DM98]
 gi|167740671|ref|ZP_02413445.1| flagellar motor protein MotB [Burkholderia pseudomallei 14]
 gi|167826260|ref|ZP_02457731.1| flagellar motor protein MotB [Burkholderia pseudomallei 9]
 gi|167847768|ref|ZP_02473276.1| flagellar motor protein MotB [Burkholderia pseudomallei B7210]
 gi|167896356|ref|ZP_02483758.1| flagellar motor protein MotB [Burkholderia pseudomallei 7894]
 gi|167904730|ref|ZP_02491935.1| flagellar motor protein MotB [Burkholderia pseudomallei NCTC 13177]
 gi|167913010|ref|ZP_02500101.1| flagellar motor protein MotB [Burkholderia pseudomallei 112]
 gi|167920947|ref|ZP_02508038.1| flagellar motor protein MotB [Burkholderia pseudomallei BCC215]
 gi|217423951|ref|ZP_03455451.1| chemotaxis protein MotB [Burkholderia pseudomallei 576]
 gi|226193238|ref|ZP_03788848.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9]
 gi|237814248|ref|YP_002898699.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346]
 gi|242314580|ref|ZP_04813596.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b]
 gi|254183890|ref|ZP_04890481.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655]
 gi|254186366|ref|ZP_04892883.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237]
 gi|254261280|ref|ZP_04952334.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a]
 gi|254298791|ref|ZP_04966242.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e]
 gi|42766714|gb|AAS45440.1| MotB [Burkholderia pseudomallei]
 gi|76579417|gb|ABA48892.1| MotB [Burkholderia pseudomallei 1710b]
 gi|126217869|gb|ABN81375.1| chemotaxis protein MotB [Burkholderia pseudomallei 668]
 gi|126226409|gb|ABN89949.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106a]
 gi|134247097|gb|EBA47183.1| chemotaxis protein MotB [Burkholderia pseudomallei 305]
 gi|157808693|gb|EDO85863.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e]
 gi|157934051|gb|EDO89721.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237]
 gi|184214422|gb|EDU11465.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655]
 gi|217393014|gb|EEC33036.1| chemotaxis protein MotB [Burkholderia pseudomallei 576]
 gi|225934838|gb|EEH30815.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9]
 gi|237506677|gb|ACQ98995.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346]
 gi|242137819|gb|EES24221.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b]
 gi|254219969|gb|EET09353.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a]
          Length = 340

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   L  G+T +      L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   S        + SL R                                     + 
Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|254194681|ref|ZP_04901112.1| chemotaxis protein MotB [Burkholderia pseudomallei S13]
 gi|169651431|gb|EDS84124.1| chemotaxis protein MotB [Burkholderia pseudomallei S13]
          Length = 340

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   L  G+T +      L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSAHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   S        + SL R                                     + 
Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|254293721|ref|YP_003059744.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
 gi|254042252|gb|ACT59047.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
          Length = 303

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 132/330 (40%), Gaps = 40/330 (12%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +++ I+IKK   +    ++ G+WK+ YADF+T +MAFFL+MW+IN T  D K+ I  YF 
Sbjct: 3   DNRPIVIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTSPDQKRGIADYFA 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +               +         +     +K +   +  ST          N 
Sbjct: 63  PASVSKSRQGSDGMLGGTSFQDDGARSGGTNRPMPESKQTASKRRTSTKNAGTPSNETNK 122

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +S S  S+                        +I   E        +    AM+   
Sbjct: 123 SKEVSQSAMSK------------------------AIAMREQAEFERAEQSLRQAMQDMP 158

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L  L+K +                + + T  G+ I I+DQ    MF  +S+ PLP    
Sbjct: 159 DLAALSKHL----------------VIDQTPEGMRIQIVDQEGRAMFAAASAKPLPRAEK 202

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  + +V+      +SI GHT   P       NW+LS DRA SA  +L  SG+  DRI 
Sbjct: 203 ILAAVSQVIMKLPNRVSISGHTGDLPTGVEGYSNWQLSSDRANSARSILESSGLDADRIY 262

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVED 340
           ++SG A        DP    NRRI I++  
Sbjct: 263 QVSGKAGSEPLYPDDPDLPGNRRISIVLLR 292


>gi|227820870|ref|YP_002824840.1| flagellar motor protein MotB [Sinorhizobium fredii NGR234]
 gi|227339869|gb|ACP24087.1| chemotaxis protein motility protein B [Sinorhizobium fredii NGR234]
          Length = 392

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 106/394 (26%), Positives = 173/394 (43%), Gaps = 53/394 (13%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+     +      III K+       ++ G WKI YADFMT +MAFFLVMW+INA +++
Sbjct: 1   MSEES--HHNGKNEIIIVKRSGDGHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG---- 116
           TK AI  YFNP        ++          +  + +     D   TK+    K G    
Sbjct: 59  TKAAIASYFNPVQLTDQKPAEKGLKNPAKDAQGEETQQRSKSDGEQTKSGGSAKTGDQLT 118

Query: 117 ----STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158
                  +       EN    LS   +    + +++   E G                  
Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAKEAGQQANISAKGEGGAAQSGPATGAEGGEAYRD 178

Query: 159 --------KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA-------------- 196
                   K  +++ + N  E       +     A +  K  +                 
Sbjct: 179 PFDPDFWTKQVEVKDAGNATEGDVADADAGNNPAAGEALKTAEARKGEVPLEQEAEAQQQ 238

Query: 197 ----KKISSTLSGLVADNIVKGVL---FETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
               + + + +   V     + +       +  G+L++I +Q + PMF   S++P  + +
Sbjct: 239 QKEAEALKAEIEKAVGGEAGRLLEGLVVTPSEGGLLVTISEQTDAPMFAVGSAVPAKDLV 298

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           + ++KIG +LA     ++IRGHTD  PF++   DNWRLS  RA SAY +L++ G+ E R+
Sbjct: 299 LAMEKIGTLLAERQGAVAIRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEQRV 358

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           ++ISGFA  RL++ +DP  +ANRRI+IL++  QG
Sbjct: 359 NQISGFADRRLQVPNDPYAAANRRIEILLQSGQG 392


>gi|157376457|ref|YP_001475057.1| flagellar motor protein MotB [Shewanella sediminis HAW-EB3]
 gi|157318831|gb|ABV37929.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 325

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/330 (21%), Positives = 124/330 (37%), Gaps = 24/330 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   D  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKEKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  + Y +   
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPVLEYQAGDD 111

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLE--KSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            S         +   G+    + +    KS +K E        +E       + ++ D  
Sbjct: 112 DSSGGVQQQRGEQRGGEASATAQEEAESKSESKSEAEAKAKSEEESKAQAAAQDQINDEV 171

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK++  L+  + D     +  E+    I+I I ++     F   S    P    V++++G
Sbjct: 172 KKMAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVG 225

Query: 257 EVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
           E+L     ++++ GHTD     N     NW LS  RA +    L++  G  + R+  + G
Sbjct: 226 ELLKDVPGIVTVSGHTDDMRISNELYSSNWDLSSKRAVAVAHELIRVKGFDQRRMK-VVG 284

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            A+    +A+D     + NRR++I +E  +
Sbjct: 285 MANSDPLVANDSPGNRARNRRVEIAIEQGK 314


>gi|254250906|ref|ZP_04944224.1| Flagellar motor protein [Burkholderia dolosa AUO158]
 gi|124893515|gb|EAY67395.1| Flagellar motor protein [Burkholderia dolosa AUO158]
          Length = 339

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   +  G+  +      L 
Sbjct: 62  FNTPLKAALFGS------------GDRSSQDSSIIDGGGRDLSSVDAGTLRRTDGTTNLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + +                                      ++N        +  L  + 
Sbjct: 110 DRVA-------------------------------------KKNDEDAQAQAQGALERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|167587857|ref|ZP_02380245.1| flagellar motor protein MotB [Burkholderia ubonensis Bu]
          Length = 340

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   +  +  S              ++  D SI     ++   +  GST +      L 
Sbjct: 62  FNTPLQAALFGS------------GDRSSQDSSIINGGGRDISSVDAGSTRRTDGSTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + +   ++ +     + SL R                                     + 
Sbjct: 110 DRVAKKNDDEAQAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 ESKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|170748097|ref|YP_001754357.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654619|gb|ACB23674.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 401

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 96/399 (24%), Positives = 162/399 (40%), Gaps = 65/399 (16%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N   II+ ++ + +D  ++ G WKI +ADFMT LMA FLV+W+I AT+D+TK +I  YF
Sbjct: 3   NNPPEIIVVRRASDEDDGHHGGVWKIAFADFMTTLMALFLVLWLIKATNDETKTSIANYF 62

Query: 70  NPFGKNLM-TASKGIFDEQ------NPPERSSQNKIDLSIDEHITKNSVDLKI------- 115
           NP   +      KG+ D Q      N   ++ +      + +  T               
Sbjct: 63  NPISLSEPLPLRKGVNDPQPASNDPNAGSKAGEPGGTADMRDKGTPLPPGSVPRERELFQ 122

Query: 116 --------------------------------GSTNQKKQYQRLENNIFYLSNSQQSEHC 143
                                           G    +  +  L   +  L+ ++     
Sbjct: 123 DPYSVLAKLAAEVEPGKPQSAAIGDLGAAGRRGGDAARDPFDPLYWEVDVLAPARAERTA 182

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENY-------------------FLPPLSKEKIL 184
            + +T    + +   +  +      + +                       PP++     
Sbjct: 183 PDGITPPPRQARPDARGAEAAGREGEAKPAGPTPVDARPPADRDGEVRAEGPPVNGPSQA 242

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           + +       L  +I+              V  + T  G+LI++ D  N  MF   S+ P
Sbjct: 243 SGQGVASAAALKAEIAKIFPPPAPGTSGPRVEVQGTPEGLLINVTDDLNFSMFAVGSAEP 302

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            PET+  ++++ + LA     I +RGHTD+ PFR+   DNWRLS  RA+ A  +L ++G+
Sbjct: 303 RPETVRAMERLAKALAARPGRIVVRGHTDSRPFRSEVYDNWRLSTARAHMASYMLTRAGI 362

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
            E RI ++ G A    + A+DP    NRRI+IL++   G
Sbjct: 363 DEARIWRVEGAADRMPRNAADPKAPENRRIEILLQGSPG 401


>gi|283851000|ref|ZP_06368285.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283573646|gb|EFC21621.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 344

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 132/336 (39%), Gaps = 41/336 (12%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           +     + IIIK+   +     + GSWK+ YAD +T +MAFFL+MW++N    D K+ + 
Sbjct: 3   EQDHKAKNIIIKRVKKVA-AGAHGGSWKVAYADLVTAMMAFFLLMWLLNMVPQDKKEQLA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFN F             +                            +G        Q 
Sbjct: 62  SYFNDFSIFQNPGPSAQLLDSGG-------------------------LGPPGAVVGSQD 96

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++    + +     K   T D + G+ L      E     +        +       
Sbjct: 97  ERPDVAIDRDGKAPSGGKGQGTGDLDGGRQLDAKAAAEAQAAAKAEAAAEAQAVA----- 151

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                   L +++   L   V + +   V     +  + I I+D+ + P+FD      LP
Sbjct: 152 --------LEQQVEKALQESVPE-LAGQVSVTQEKDKVRIEIMDKSDRPLFDLGGVALLP 202

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +   +L  +  V+      ++I GHTDA  +      NW LS  RA SA +++++ G+  
Sbjct: 203 DAQRILAAVTGVIRKDGIKVAIEGHTDAYRYSGT-YSNWDLSAGRALSARRLMLQQGLPP 261

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           D+++ +SGFA  R  +   P+++ NRRI +L+    
Sbjct: 262 DQVAAVSGFADTRPYVPGKPLDARNRRISLLLYREP 297


>gi|167624989|ref|YP_001675283.1| flagellar motor protein MotB [Shewanella halifaxensis HAW-EB4]
 gi|167355011|gb|ABZ77624.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 322

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 23/328 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   D  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKAKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  + + +   
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPMLEFQAGED 111

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            S         +   G+    + +  ++  K E+         K  A   + ++ +  KK
Sbjct: 112 DSAGGIQQQRGEQRGGQASATAVEQSEAEAKAESAAQSETESTKTQASA-QDKINEQVKK 170

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++  L+  + D     +  E+    I+I I ++     F   S    P    V++++GE+
Sbjct: 171 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRRVGEL 224

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
           L     ++++ GHTD     N     NW LS  RA +    L++  G  + R+  + G A
Sbjct: 225 LKDVPGIVTVSGHTDDWKISNELYSSNWDLSSKRAVAVAHELIRVKGFDQQRMK-VVGMA 283

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
                + ++     + NRR++I +E  +
Sbjct: 284 SSAPLVENNSSANRARNRRVEIAIEQGK 311


>gi|288958120|ref|YP_003448461.1| chemotaxis protein [Azospirillum sp. B510]
 gi|288910428|dbj|BAI71917.1| chemotaxis protein [Azospirillum sp. B510]
          Length = 386

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 19/328 (5%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL++W++N T  D +K I  YF+P   +   +  G         
Sbjct: 28  AWKVAYADFVTAMMAFFLLLWLLNVTTSDQRKGIADYFSPVSVSREQSGSGGMLGGKTIT 87

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                    S        S      S          E        +   +  K +   D 
Sbjct: 88  VPGAQVSPSSPMSADVPVSGPPGYSSQQSDDADDPTEATSGPGQGTGPGKPAKAAPDADI 147

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSK-----------------EKILAMKRKKRLQD 194
              K      + +K + +       P  K                     A K  ++ Q 
Sbjct: 148 ADQKPNETRAEFQKRMEEMAKQLGIPGQKPGEKLSDFGERVKEAMNSLQGAAKEARQFQQ 207

Query: 195 LAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            A +I   +      + + + ++ + T  G+ I I+DQ    MF   S    P+T  ++Q
Sbjct: 208 AATEIRQAIQSVPELEPLAQNLMIDQTPEGLRIQIVDQDRVSMFPAGSGQMYPQTRQLVQ 267

Query: 254 KIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++ + L      +SI GHTD+SPF     RDNW LS +RA +  + L+  G++  RI  +
Sbjct: 268 QVAKALTKLPNKLSISGHTDSSPFPAGSGRDNWDLSTERANATRRALLAGGINPSRIQNV 327

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVED 340
            G A     +A  P +  NRRI +++  
Sbjct: 328 VGKADTDPLVADQPNSPRNRRITMVLLR 355


>gi|303248925|ref|ZP_07335172.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489648|gb|EFL49584.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 355

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 123/334 (36%), Gaps = 47/334 (14%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             Q     IIIK+   +     + GSWK+ YAD +T +MAFFL+MW++N    + K+ + 
Sbjct: 2   AEQGQKANIIIKRVKKVA-GGAHGGSWKVAYADLVTAMMAFFLLMWLLNMVPQEKKEQLA 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFN F             +       +           +  +    +      +     
Sbjct: 61  SYFNDFSLFQNPGPSSQLLDSGGLGPPAVVVGSQDERPDVAIDRGGKEPSGGAGQDTGDL 120

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                       ++    ++  +                                     
Sbjct: 121 DGGKRLEAKRRAEAAAKADAAAKA------------------------------------ 144

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                   L  ++   L   V + +   V    +   + I I+D+ + P+FD      LP
Sbjct: 145 --------LEGQLEQALQKDVPE-LAGQVSVTQSNDKVRIEIMDKADRPLFDLGGVTLLP 195

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +   +L  + +V+      ++I GHTDA  +      NW LS  RA +A +++++ G+S 
Sbjct: 196 DAKRILAAVTDVIKKEGVKVAIEGHTDAYRYSGT-YTNWDLSAGRALAARRMMIQQGLSP 254

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           D+++ ++G+A  R  +  +  +  NRRI +L+  
Sbjct: 255 DQVAAVTGYADTRPYVPGNLYDPKNRRISLLLYR 288


>gi|319898651|ref|YP_004158744.1| flagellar motor protein MotB [Bartonella clarridgeiae 73]
 gi|319402615|emb|CBI76160.1| putative flagellar motor protein MotB [Bartonella clarridgeiae 73]
          Length = 384

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 13/352 (3%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             D  Q + + II+++    D   ++ G WKI YADFMT +MA FLV+W++N  DD TK+
Sbjct: 2   KSDDQQSSSEIIIVRRGGHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDATKE 61

Query: 64  AIEQYFNPFGKNLMTAS-------------KGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           AI  YFNP        S             K   D++   +  S+    +   E +    
Sbjct: 62  AIANYFNPIKLVDPQTSNRGIQHNDIEQDKKSSLDQECKDDAQSEKSNAMEEAELMRDPY 121

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           + LK    +++      E      +   Q         +   +  D        +++   
Sbjct: 122 LGLKKIVQSERNAQNPAEQQFEQGNLVGQGAGDSQKNLQLGTEYHDPFSPYYWSENVASS 181

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +   +         + +     ++    +      +  +        +  + G++I ++D
Sbjct: 182 QKRKIQKQKMMAKESEQENNSSENSHALLKELTDLIEGETNNILAHVKPIKEGVMIELMD 241

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           Q    MF    SIP  +TI ++  +  ++A     + I GHTDA P+R+   DNW+LS  
Sbjct: 242 QPKYEMFKVGLSIPTAQTIDLISSMAGIIAKHQGDVVISGHTDARPYRSNVYDNWQLSTA 301

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RA  AY +L++ G+ E RI ++ G+A   LK   DP  + NRRI I + D +
Sbjct: 302 RAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353


>gi|167838309|ref|ZP_02465168.1| flagellar motor protein MotB [Burkholderia thailandensis MSMB43]
          Length = 488

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  DQ II+K+        ++ G+WK+ YADFMT +MAFFL+MW+++A      K I  Y
Sbjct: 3   KGKDQAIIVKRVS-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI +   ++   ++ G+T        L 
Sbjct: 62  FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSVEAGATRLTDGSTHLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + +   S        + SL R                                     + 
Sbjct: 110 DRVAKKSEDDALAQAQGSLER-------------------------------------RE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS+   P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSNAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289


>gi|144899852|emb|CAM76716.1| Flagellar motor protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 323

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 47/334 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q IIIK+   +    ++ G+WK+ YADF+T +MAFFL++W++NA  ++    I  YF 
Sbjct: 3   EGQQIIIKRVKKVA-AGHHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGISNYFA 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +   +  G         + +Q     S           +  G  +           
Sbjct: 62  PSMASKSASGAGGLLGGQVIGQGAQVSQTSSPSLVQHLPPSSIGPGGEDMT--------- 112

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                              S N E    +      + +A + ++
Sbjct: 113 -----------------------------------SENTEPMEGMSEEDFREKMAEREQQ 137

Query: 191 RLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +     + + + L G          ++ + T  G+ I I DQ    MF   SS     T 
Sbjct: 138 KFDKAKEVLDNALKGIPELKQFEGSMMVDNTPEGLRIQITDQEGLAMFPSGSSAMFGHTR 197

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  +  ++      ISI GHTDA PFR+     NW LS DRA ++ + L+ SGV E+R
Sbjct: 198 ALLDLVSRIVNQMPNKISITGHTDAIPFRDPSGYTNWELSADRALASRRALLGSGVPEER 257

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I +I G A     +  DP    NRRI I++    
Sbjct: 258 IDRIVGRASSEPLVVDDPKAPRNRRISIILLREN 291


>gi|238025855|ref|YP_002910086.1| flagellar motor protein MotB [Burkholderia glumae BGR1]
 gi|124695899|gb|ABN14293.1| MotB [Burkholderia glumae BGR1]
 gi|124695929|gb|ABN14297.1| MotB [Burkholderia glumae BGR1]
 gi|237875049|gb|ACR27382.1| MotB [Burkholderia glumae BGR1]
          Length = 349

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW+++A      K I  Y
Sbjct: 3   KGKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  +       +   +   + I  S      +      + S   +K    L 
Sbjct: 62  FNTPLKAALFGNGDRSSHDSSIIQGGGSDITRSDAGTTRRTDGTTMLASRLAQKGRDDLH 121

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +                                                 +         
Sbjct: 122 D-------------------------------------------------TDPGSQDRAE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T +G+ I I+D +  PMF  +S++  P 
Sbjct: 133 QARLHDLQIKLMAAIEANPVLRQFKQQIRIDSTLSGLRIEIVDTQKRPMFATASNMVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNEVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELISGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ +++G A  +    +DP +  NRRI ILV + +
Sbjct: 253 DAKVLRVTGLASTQNLNKADPFDPENRRISILVLNHK 289


>gi|157962805|ref|YP_001502839.1| flagellar motor protein MotB [Shewanella pealeana ATCC 700345]
 gi|157847805|gb|ABV88304.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 322

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 121/328 (36%), Gaps = 23/328 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   D  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKAKCDCPPAGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  + +     
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPMLEFQEGED 111

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            S         +   G+    + +  ++  K EN         K  A   + ++ +  KK
Sbjct: 112 DSAGGIQQQRGEQRGGQASATAVEQSEAEAKAENAAQSDTQSTKTQASA-QDKINEQVKK 170

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++  L+  + D     +  E+    I+I I ++     F   S    P    V++++GE+
Sbjct: 171 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPVVRRVGEL 224

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
           L     ++++ GHTD     N     NW LS  RA +    L+K  G   +R+  + G A
Sbjct: 225 LKDVPGIVTVSGHTDDWNISNELYSSNWDLSSKRAVAVGHELIKVKGFEPNRMK-VVGMA 283

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
                + ++     + NRR++I +E  +
Sbjct: 284 SSDPLVENNSSANRARNRRVEIAIEQGK 311


>gi|77361278|ref|YP_340853.1| flagellar motor protein MotB [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876189|emb|CAI87411.1| sodium-driven polar flagellar protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 306

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 37/326 (11%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 4   QECKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM----------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I    T    +     T Q++  +  +  + + +  + S
Sbjct: 53  KFAFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESS 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +     D   G+    S +                + E+ ++   +++  DL KKI+
Sbjct: 113 AGGRQEQRGDKRGGESRSTSKE---------------QASEQAISAADQQQTNDLVKKIA 157

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   + D     +  E+    I+I I +      F   S+   P+   ++Q+IG +L 
Sbjct: 158 QQLEKQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQEIGVLLK 211

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I++ GHTD     N    +NW LS  RA +    L K  G  ++R+  + G A  
Sbjct: 212 DVPGEITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQKVVGFDKNRMM-VVGRAET 270

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
           R  + +D       NRR++I +   +
Sbjct: 271 RPLVPNDSNEDRRRNRRVEISILQGK 296


>gi|134294329|ref|YP_001118064.1| flagellar motor protein MotB [Burkholderia vietnamiensis G4]
 gi|134137486|gb|ABO53229.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 338

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSATPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   +  +  S              ++  D SI     ++   +  G+T +      L 
Sbjct: 62  FNTPLQAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTTRRTDGSTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + +                                                 +  +  + 
Sbjct: 110 DRVAKKGED-------------------------------------TAQAQAQGAIERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS+   P 
Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDSQKRPMFAMSSNNVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|217976235|ref|YP_002360382.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
 gi|217501611|gb|ACK49020.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
          Length = 402

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/397 (26%), Positives = 168/397 (42%), Gaps = 65/397 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q I+I K+ + DD   + G+WKI +ADFMT +MA FLV+W+I++T D TK ++ QY
Sbjct: 3   EKEHQEIVIVKRYSRDDEARHGGAWKIAFADFMTAMMALFLVLWLISSTSDKTKHSVAQY 62

Query: 69  FNPF-----------GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT---------- 107
           FNP             ++      G   +    E  + +  DL+  + +           
Sbjct: 63  FNPVKLVDMTTLKKGFRDPKKTEMGAGPKTTESEIDADSNKDLAETQEVAEHPGAKVRLI 122

Query: 108 --------------------------KNSVDLKIGSTNQKKQYQRLENNIFYLSN----- 136
                                      +S + + G T    +   +  + F  +      
Sbjct: 123 SESKLFRDPYAALAEIAANAIEAAPHPSSGEPQSGPTEFSVESSDVFVDPFTTAPRLADT 182

Query: 137 -------------SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                         ++ +   +S  + +E      +         K              
Sbjct: 183 TVDGPASHAKPAIPERDKQAPSSPKQRAEPLPHAEEQLSPPAGAGKGTKTGDAATEAAMA 242

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A         L   +++             +  E T  G+LIS+ D R   MF   S+ 
Sbjct: 243 SAQPMDTETASLKAGLTALAPQKGRFGDGPRIEVENTDEGLLISLTDDRKFSMFAIGSAA 302

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           PLP+TI  + KIG++L   + ++ +RGHTDA PF++   DNWRLS  RA+ A  +L + G
Sbjct: 303 PLPQTIEAMAKIGDLLKTRSGMVVVRGHTDARPFKSATYDNWRLSTARAHMAQYMLTRGG 362

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + E RI KI GFA HRLK+A++P  +ANRRI+IL+  
Sbjct: 363 LDEKRIEKIEGFADHRLKVAAEPTAAANRRIEILLRK 399


>gi|58038613|ref|YP_190577.1| chemotaxis MotB protein [Gluconobacter oxydans 621H]
 gi|58001027|gb|AAW59921.1| Chemotaxis MotB protein [Gluconobacter oxydans 621H]
          Length = 311

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 30/337 (8%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
            ++N +  + IIIK+   + +  ++ G+WKI YADF+T +MAFFLVMW+INAT +D +K 
Sbjct: 2   SNQNGKEARKIIIKRF-DVVEGGHHGGAWKIAYADFVTAMMAFFLVMWLINATTEDQRKG 60

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           I  +FNP                           D+         +    +    +    
Sbjct: 61  IANFFNPMAVWK----------------------DMPPPVDNVLPAAPEPVSLETKPVAL 98

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +  ++                  T  S     +    D +            P       
Sbjct: 99  KPGKDQYGKAPQGAAGSQQGKDQTAPSVHTAQIVVLHDSQI-------QPGEPPVTPSAQ 151

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             +++ R +   K  +   +     ++   V       G+ + I D  + PMF    S P
Sbjct: 152 KAEQEARAEAAQKIQALISNTPELADVRSQVSVTVGDDGLHVQIADSDHQPMFAMGQSSP 211

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            P  + +++ I   L      +SI G+TDA+P+R     NW LS  RA +   ++++SG 
Sbjct: 212 NPHAVQLIKAIVPYLEKLHGKLSIAGYTDAAPYRPGQLSNWSLSSARAVAVRDLVVQSGF 271

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            + R+  +SG+A   L   + P+N  NRRI +++   
Sbjct: 272 PDRRLKSVSGYADRNLFDPTQPLNPRNRRIVLVLSPD 308


>gi|294139895|ref|YP_003555873.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
           DSS12]
 gi|293326364|dbj|BAJ01095.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
           DSS12]
          Length = 325

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 24/330 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   +  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKAKCECPPPGAPLWLATFADLMSLLMCFFILLLSFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  + Y +   
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPILEYQAGDD 111

Query: 139 QSEHC--KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            S     +    +   +     +  D  K+ +K E+       +E       ++ + D  
Sbjct: 112 DSAGGVQQQRGEQRGGEASATAQEQDEAKAESKAESESKAKAEEESKAQAAAQENINDQV 171

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK++  L+  + D     +  E+    I+I I ++     F   S    P    V++++G
Sbjct: 172 KKMAMELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVVRRVG 225

Query: 257 EVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
           E+L     ++++ GHTD     N     NW LS  RA +    L+K  G  ++R+  + G
Sbjct: 226 ELLRDIPGIVTVSGHTDDMHISNELYSSNWDLSSKRAVAVAHELIKVKGFEQNRMK-VVG 284

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            A+    + +D     S NRR++I +E  +
Sbjct: 285 MANSAPLVDNDSASNRSRNRRVEIAIEQGK 314


>gi|332534966|ref|ZP_08410784.1| flagellar motor rotation protein MotB [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035584|gb|EGI72076.1| flagellar motor rotation protein MotB [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 306

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/326 (21%), Positives = 120/326 (36%), Gaps = 37/326 (11%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 4   QECKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM----------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I    T    +     T Q++  +  +  + + +  + S
Sbjct: 53  KFAFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESS 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +     D   G+    S +                S E+  +   +++  +L KKI+
Sbjct: 113 AGGRQEQRGDKRGGESRSTSQE---------------QSSEQATSAADQEQTNELVKKIA 157

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   + D     +  E+    I+I I +      F   S+   P+   ++Q IG +L 
Sbjct: 158 QQLEKQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQDIGVLLK 211

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I++ GHTD     N    +NW LS  RA +    L    G  ++R+  + G A  
Sbjct: 212 DVPGEITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQTVQGFDKNRMM-VVGRADT 270

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
           R  + +D       NRR++I +   +
Sbjct: 271 RPLVPNDSNEDRRRNRRVEISILQGK 296


>gi|330815146|ref|YP_004358851.1| MotB [Burkholderia gladioli BSR3]
 gi|327367539|gb|AEA58895.1| MotB [Burkholderia gladioli BSR3]
          Length = 361

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW+++A      K I  Y
Sbjct: 3   KGKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  +              ++  D SI      +      G+T +      L 
Sbjct: 62  FNTPLKAALFGN------------GDRSSHDSSIINGGGSDITRSDSGTTRRTDGSTMLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           N +       + +  + S                                        + 
Sbjct: 110 NRLTQAGRDDEHDVDRGS-------------------------------------QDRQE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQIKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDTQKRPMFALSSDAVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIVMQGHTDAVPYSGGEKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ +++G A  +    +DP++  NRRI ILV +R+
Sbjct: 253 EAKVLRVTGLASTQNLNKADPLDPENRRISILVLNRK 289


>gi|119472095|ref|ZP_01614326.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
 gi|119445115|gb|EAW26408.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
          Length = 306

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 37/324 (11%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
               P  L +W   +AD M++LM FF+++   +  D    K I               K 
Sbjct: 6   CKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KF 54

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  QN  E     K    I    T    +     T Q++  +  +  + + +  + S  
Sbjct: 55  AFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESSAG 114

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            +     D   G+    S +                S E+ ++   +++  +L KKI+  
Sbjct: 115 GRQEQRGDKRGGESRSTSQE---------------QSSEQAISAADQEQTNELVKKIAQQ 159

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   + D     +  E+    I+I I +      F   S+   P+   ++Q IGE+L   
Sbjct: 160 LERQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQDIGELLKDV 213

Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
              I++ GHTD     N    +NW LS  RA +    L    G  + R+  + G A  R 
Sbjct: 214 PGEITVSGHTDDFQVSNELYVNNWDLSSKRAVAVASELQTVQGFDKTRMM-VVGRAETRP 272

Query: 321 KIASDPM--NSANRRIDILVEDRQ 342
            + ++       NRR++I +   +
Sbjct: 273 LVPNETNEDRRRNRRVEISILQGK 296


>gi|78064833|ref|YP_367602.1| flagellar motor protein MotB [Burkholderia sp. 383]
 gi|77965578|gb|ABB06958.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 338

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APSKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQMKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI     ++   +  G+  +     +L 
Sbjct: 62  FNTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +  + +                                           ++       
Sbjct: 110 ERLAKVGDEHSRSQ-------------------------------------EQGAQDRLE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDNVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYSGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|332527142|ref|ZP_08403219.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332111570|gb|EGJ11552.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 322

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 64/339 (18%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T +  +K I  
Sbjct: 4   DAKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDRKGIAD 62

Query: 68  YFN-PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           YF  P    L +   G  D  +  +            + +T+ +  +K G     +    
Sbjct: 63  YFTSPLKVALNSGGSGAGDASHVLKGG---------GQDLTRTTGQVKRGDIEAPR---- 109

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                           +   + ++    
Sbjct: 110 ----------------------------------------------ATVNLQALKQEQVR 123

Query: 187 KRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               RLQDL ++I   ++       +   +  + TR G+ I I+D++N PMF   S++  
Sbjct: 124 AEIVRLQDLKRRIEEKIAANKRLSAMRSQLRLDMTRDGLRIQIVDEQNRPMFASGSAVVQ 183

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303
           P    +LQ+IG VLA     +++ GHTDA  +        NW LS DRA ++ +VL + G
Sbjct: 184 PYMRELLQEIGSVLAEVPNRLTLEGHTDAMAYAGGERGYSNWELSSDRANASRRVLAEGG 243

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + EDR+ ++ G A  +     DP+   NRRI I+V +R+
Sbjct: 244 LPEDRMLRVQGLASSQPFDRQDPLAPTNRRISIIVMNRE 282


>gi|221214225|ref|ZP_03587197.1| flagellar motor protein [Burkholderia multivorans CGD1]
 gi|221165880|gb|EED98354.1| flagellar motor protein [Burkholderia multivorans CGD1]
          Length = 338

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  ++ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   +  +  S              ++  D SI     ++   +  G+  +     +L 
Sbjct: 62  FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   ++                                            +  L  + 
Sbjct: 110 ERVAKPADD-------------------------------------TAQARMQGALERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|254246760|ref|ZP_04940081.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
 gi|124871536|gb|EAY63252.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
          Length = 339

 Score =  194 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI     ++   +  G+  +      L 
Sbjct: 62  FNMPLKAAILGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +    +       + +  R                                       
Sbjct: 110 ERLAKAGDDNSRSQAQGAQDRL-------------------------------------E 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|319406989|emb|CBI80626.1| putative flagellar motor protein MotB [Bartonella sp. 1-1C]
          Length = 384

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 150/352 (42%), Gaps = 13/352 (3%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             +  Q + + II+++    D   ++ G WKI YADFMT +MA FLV+W++N  DD+ K+
Sbjct: 2   KSEDQQSSSEIIIVRRGQHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDEAKE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           AI  YFNP        S      ++  +    +      D+  ++ S  ++         
Sbjct: 62  AIANYFNPIKLVDPQTSNRGIQHKDIEQDKKSSLDQERRDDDQSEKSNPMEEAELMHNPY 121

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
               +           SE          +   D  ++  L    +   +      + +  
Sbjct: 122 LGLEKIVQSEHHAKNPSEQQFEKGDLLGQGVGDSQENLQLGIEYHDPFSPDYWRENIDSF 181

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------------FETTRTGILISIID 230
              K +K+   + + I    S   +  + K +               +  + G++I ++D
Sbjct: 182 QKRKDQKQKTLVKESIQENNSSENSRVLAKELTDLIEAKNSDILAHVKPIKEGVMIELMD 241

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           Q    MF    S+P   T+ ++  +  ++A     + I GHTDA P+R+   DNW+LS  
Sbjct: 242 QPKYEMFKVGLSVPTARTVDLISSMAGIIAKYQGDVVISGHTDARPYRSTVYDNWQLSTA 301

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RA  AY +L++ G  E RI ++ G+A   LK   +P  + NRRI I + D +
Sbjct: 302 RAQMAYYMLVRGGFDEKRILRVEGYADRDLKNKKNPYAAENRRISIFIRDPK 353


>gi|83955101|ref|ZP_00963757.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
 gi|83840430|gb|EAP79603.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
          Length = 394

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 14/328 (4%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           Q  + KK   I+   ++ G WK+ YADFMT +MAFFL+MWI+++ D+   + I +YF   
Sbjct: 6   QPRVFKKVEVIEGGGHHGGGWKVAYADFMTAMMAFFLLMWILSSADEQKLRGIAEYFTNA 65

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
                    G+ D        +    + +I    ++                        
Sbjct: 66  TL---PGGSGVLDGATLGPPGTLTASNGAIVARGSE--------LGKIDDPASAKWEIRD 114

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             + S   E    S     E       ++  + + +  ++     +     L  ++ K+L
Sbjct: 115 ETATSVPDETQIGSEDGAHENPAAANVASASQTASDGSKSAGDATIDNVHALDNEKFKKL 174

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +     + +       D + K ++F+ T  G+ I IIDQ   PMF    +     T  +L
Sbjct: 175 E--QDILQAMQENPDLDPLKKNLIFQQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLL 232

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +G+ LA     I++ GHTDA  F N    DNW LS DRA +  +V   SGV+ DRI +
Sbjct: 233 ANLGKSLARLPNKITLSGHTDAVRFANSQKYDNWDLSSDRANATRRVFEASGVARDRIIR 292

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVE 339
           +SG A     +  +P +++NRRI + V+
Sbjct: 293 VSGLADTAPLVPENPTDASNRRITVSVQ 320


>gi|221202105|ref|ZP_03575140.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221209087|ref|ZP_03582082.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221171082|gb|EEE03534.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221177899|gb|EEE10311.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 338

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  ++ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   +  +  S              ++  D SI     ++   +  G+  +     +L 
Sbjct: 62  FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   ++                                            +  L  + 
Sbjct: 110 ERVAKPTDD-------------------------------------TAQARMQGALERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|115350223|ref|YP_772062.1| flagellar motor protein MotB [Burkholderia ambifaria AMMD]
 gi|115280211|gb|ABI85728.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 339

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +YF
Sbjct: 4   GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   K  +  S              ++  D SI     ++      G+  +      L +
Sbjct: 63  NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +    +       + +  R                                       +
Sbjct: 111 RVAKAGDQNSRAQAQGAQDRL-------------------------------------EQ 133

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P  
Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ E
Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 254 SKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|172059245|ref|YP_001806897.1| flagellar motor protein MotB [Burkholderia ambifaria MC40-6]
 gi|171991762|gb|ACB62681.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 339

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 53/336 (15%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +YF
Sbjct: 4   GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   K  +  S              ++  D SI     ++      G+  +      L +
Sbjct: 63  NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +    +       + +  R                                       +
Sbjct: 111 RVAKAGDQNSRAQAQGAQDRL-------------------------------------EQ 133

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P  
Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPYM 193

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ E
Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A  +    +DP++S NRRI ++V +R+
Sbjct: 254 AKVLRVLGLASTQNLNKADPLDSENRRISVIVLNRK 289


>gi|161523343|ref|YP_001578355.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616]
 gi|189351884|ref|YP_001947512.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616]
 gi|160340772|gb|ABX13858.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189335906|dbj|BAG44976.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
          Length = 338

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  ++ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   +  +  S              ++  D SI     ++      G+  +     +L 
Sbjct: 62  FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTQLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +   ++                                            +  L  + 
Sbjct: 110 ERVAKPADD-------------------------------------TAQARMQGALERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|206558533|ref|YP_002229293.1| flagellar motor protein MotB [Burkholderia cenocepacia J2315]
 gi|198034570|emb|CAR50435.1| chemotaxis protein MotB [Burkholderia cenocepacia J2315]
          Length = 339

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI     ++   +  G+  +      L 
Sbjct: 62  FNMPLKAAILGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +    +       + +  R                                       
Sbjct: 110 ERLAKAGDENSRSQAQGAQDRL-------------------------------------E 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDRVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|83944198|ref|ZP_00956654.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
 gi|83845065|gb|EAP82946.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
          Length = 394

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 14/328 (4%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           Q  + KK   I+   ++ G WK+ YADFMT +MAFFL+MWI+++ D+   + I +YF   
Sbjct: 6   QPRVFKKVEVIEGGGHHGGGWKVAYADFMTAMMAFFLLMWILSSADEQKLRGIAEYFTNA 65

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
                    G+ D        +    + +I    ++                        
Sbjct: 66  TL---PGGSGVLDGATLGPPGTLTASNGAIVARGSE--------LGKIDDPASAKWEIRD 114

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             + S   E    S     E       ++  + + +  ++     +     L  ++ K+L
Sbjct: 115 ETATSVPDETQIGSEDGAHENPAAANVASASQAASDGSKSAGDATIDNVHALDNEKFKKL 174

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +     + +       D + K ++F+ T  G+ I IIDQ   PMF    +     T  +L
Sbjct: 175 E--QDILQAMQENPDLDPLKKNLIFQQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLL 232

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +G+ LA     I++ GHTDA  F N    DNW LS DRA +  +V   SGV+ DRI +
Sbjct: 233 ANLGKSLARLPNKITLSGHTDAVRFANSQKYDNWDLSSDRANATRRVFEASGVARDRIIR 292

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVE 339
           +SG A     +  +P +++NRRI + V+
Sbjct: 293 VSGLADTAPLVPENPTDASNRRITVSVQ 320


>gi|261855636|ref|YP_003262919.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261836105|gb|ACX95872.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 358

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 141/336 (41%), Gaps = 56/336 (16%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           +  +  + IIIKK        +  G+WKI YADF+T +MAFFL+MW++ +  +   K I 
Sbjct: 3   EQPDQSKPIIIKKVSKGHGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSVGEVKLKGIA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFN   K  +            P       +  +  E +T+    ++ GS    K    
Sbjct: 62  DYFNNPVKVTLEGG---------PSAGMSVSLIDAGGEDLTRKEGQVRNGSEPPAKIETD 112

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                           +      K +  
Sbjct: 113 ---------------------------------------------QKKMTEEEARKKIEE 127

Query: 187 KRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           + KKR+++L K++ S ++           +  + TR G+ I IIDQ N PMF  SSS   
Sbjct: 128 EDKKRIENLKKELESLINVDPALKAYKDQIKLDMTRDGLRIQIIDQANRPMFKISSSRLE 187

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P    +L+K+  V+      +SI GHTD+ P+  + R NW LS DRA +A + L++ G  
Sbjct: 188 PYAAEILKKLAPVINKLPNRLSITGHTDSLPYNGVDRTNWELSADRANAARRELVQDGYD 247

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           E ++ ++ G A     I SDP +  NRRI I+V + 
Sbjct: 248 ESKLLRVVGMAAALPFIPSDPADPRNRRISIIVMND 283


>gi|257094100|ref|YP_003167741.1| flagellar motor protein MotB [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046624|gb|ACV35812.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 319

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 58/336 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E+ + I+IK+   +    ++ G+WKI YADF+T +MAFFL+MW++ +T     K I  +F
Sbjct: 2   EDVRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTASGDLKGIADFF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K   T   G  D  +  +            + +T+ S  +K G  + K +   L+ 
Sbjct: 61  QNPLKIASTGGSGTGDSSSVLKGG---------GKDLTRRSGQVKSGDIDSKSKTVNLKE 111

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                               K    + K
Sbjct: 112 TNA---------------------------------------------EQARKEFEEREK 126

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             L +L + I   +            +L + T  G+ I I+D++N PMFD SS+   P T
Sbjct: 127 ALLGELKESIEKLIESNPALKQFKSQLLIDITSEGLRIQIVDEQNRPMFDTSSAELKPHT 186

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
            V+L++IG+ L      +S+ GHTDA+ +        NW LS +RA ++ + L+  G+ E
Sbjct: 187 RVILREIGKALNAVHNKLSLSGHTDAAQYGGGDKGFSNWELSANRANASRRELIAGGMDE 246

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A   L   +DP++S NRRI I+V +++
Sbjct: 247 HKVLRVVGLASTVLFDKNDPLSSINRRISIVVLNKR 282


>gi|107024396|ref|YP_622723.1| flagellar motor protein MotB [Burkholderia cenocepacia AU 1054]
 gi|116688278|ref|YP_833901.1| flagellar motor protein MotB [Burkholderia cenocepacia HI2424]
 gi|170731591|ref|YP_001763538.1| flagellar motor protein MotB [Burkholderia cenocepacia MC0-3]
 gi|105894585|gb|ABF77750.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116646367|gb|ABK07008.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|169814833|gb|ACA89416.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 339

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  + SI     ++   +  G+  +      L 
Sbjct: 62  FNMPLKAAILGS------------GDRSSQESSIINGGGRDLSSVDAGTLRRTDGTTSLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +    +       + +  R                                       
Sbjct: 110 ERLAKAGDDNSRSQAQGAQDRL-------------------------------------E 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|170703865|ref|ZP_02894555.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170131226|gb|EDS99863.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 339

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +YF
Sbjct: 4   GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   K  +  S              ++  D SI     ++      G+  +      L +
Sbjct: 63  NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +    +       + +  R                                       +
Sbjct: 111 RVAKAGDQNSRSQAQGAQDRL-------------------------------------EQ 133

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P  
Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ E
Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 254 AKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|253998520|ref|YP_003050583.1| flagellar motor protein MotB [Methylovorus sp. SIP3-4]
 gi|313200598|ref|YP_004039256.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|253985199|gb|ACT50056.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
 gi|312439914|gb|ADQ84020.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 316

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 62/336 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E+ + II+K+   +    ++ G+WKI YADF+T +MAFFL+MW++ +T   T + I +YF
Sbjct: 3   EDTKPIIVKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKATLEGISEYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  +            P  ++ + +     + +TK    +K     + KQ +    
Sbjct: 62  KMPLKVALQGG---------PSVAASDSVLKGGGKDLTKKQAQVKPVDGPKGKQKEVDIK 112

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +                                                  +  L    +
Sbjct: 113 D-------------------------------------------------AKTALEKAEQ 123

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++L +L  KI   + +        K +L + T  G+ I I+D++N PMF  S +   P  
Sbjct: 124 EKLAELKLKIEEAIDASATLSKFKKQLLIDITSEGLRIQIVDEQNRPMFASSKAELQPYA 183

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L +IG +L      IS+ GHTDA P+        NW LS DRA ++ + L+  G+ E
Sbjct: 184 KQILHEIGSMLNDVPNKISLSGHTDAVPYPTGDKGYSNWELSSDRANASRRELVAGGMDE 243

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G +   L    +P+N  NRRI I++ +++
Sbjct: 244 SKLLRVVGLSSASLFDKENPLNPVNRRISIIIMNKK 279


>gi|325981670|ref|YP_004294072.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325531189|gb|ADZ25910.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 312

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 64/339 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +  + + I+IK+   +    ++ G+WKI YADF+T +MAFFL+MW++ ++     + I 
Sbjct: 2   ADDLSQRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSSTQSQLEGIS 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           +YF    K        I +  +  +              +T+    +K G      +   
Sbjct: 61  EYFKTPLKIAFMGGSSIGESNSLIKGG---------GTDLTRQHGQVKNGEIITNDK--- 108

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                               + + I   
Sbjct: 109 ------------------------------------------------ANKQAIKVIKER 120

Query: 187 KRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              ++L+ L KKI   +            +L + T  G+ I I+D++N PMF    +   
Sbjct: 121 IELEKLEGLKKKIEEAIQANPQLQRFANQLLLDITTDGLRIQIVDEQNRPMFALGRAELQ 180

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303
           P T  +L++IG++L   T  IS+ GHTDA PF +      NW LS DRA ++ + L+  G
Sbjct: 181 PYTRTILREIGKMLNEVTNKISLSGHTDAKPFPSGDKGYSNWELSADRANASRRELIVGG 240

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  +++ ++ G +   L    DP+N  NRRI I+V + +
Sbjct: 241 MDANKMLQVVGLSSAVLFDKDDPLNPINRRISIVVMNEK 279


>gi|319403973|emb|CBI77561.1| putative flagellar motor protein MotB [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 384

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 13/352 (3%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             +  Q + + II+++    D   ++ G WKI YADFMT +MA FLV+W++N  DD+TK+
Sbjct: 2   KSEDQQSSSEIIIVRRGQHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDETKE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           AI  YFNP        S      ++  +    +      D+  ++ S  ++         
Sbjct: 62  AIANYFNPIKLVDPQTSNRGIQHKDIEQDKKSSLDQERRDDDQSEKSNAMEEAELMHNPY 121

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
               +           SE          +   D  ++  L    +   +      + +  
Sbjct: 122 PGLEKIVQSEHHAKNPSEQQFEKGDLVGQGVGDSQENLQLGTEHHDPFSPHYWRENIDFS 181

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------------FETTRTGILISIID 230
              K +K+   + + I    S   +  + + +               +  + G++I ++D
Sbjct: 182 QKRKDQKQKTLVKESIQENNSSENSRALAQELTDFIEGENSNILAHVKPIKEGVMIELMD 241

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           Q    MF    S+P   TI ++  +  ++A     + I GHTDA  +R+   DNW+LS  
Sbjct: 242 QPKYEMFKVGLSVPTARTIDLISSMAGIIAKYQGDVVISGHTDARAYRSAVYDNWQLSTA 301

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RA  AY +L++ G  E RI ++ G+A   LK   DP  + NRRI I + D +
Sbjct: 302 RAQMAYYMLVRGGFDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353


>gi|171322726|ref|ZP_02911473.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171091928|gb|EDT37395.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 339

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +YF
Sbjct: 4   GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   K  +  S              ++  D SI     ++      G+  +      L +
Sbjct: 63  NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +    +       + +  R                                       +
Sbjct: 111 RVAKAGDQNSRSQAQGAQDRL-------------------------------------EQ 133

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P  
Sbjct: 134 TRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG+ L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ E
Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDE 253

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 254 AKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289


>gi|186477722|ref|YP_001859192.1| flagellar motor protein MotB [Burkholderia phymatum STM815]
 gi|184194181|gb|ACC72146.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 369

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I  Y
Sbjct: 3   KDKDRAIVVKR-AAPKKGGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +                                                   
Sbjct: 62  FNQPLKITLWGG------------------------------------------------ 73

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +     S+         S  +D    +    +   E +  + ++  L  L     +  + 
Sbjct: 74  DRSAVDSSQIPGGGRDISTDKDGITHQTDGSTNRAEHTAARADDQALQQLQG--AVERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T  G+ I I+D +  PMF  + +I  P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLQGLRIEIVDTQKRPMFATAQAIVQPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +LQ IG  L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MHDILQAIGNTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +++
Sbjct: 252 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNKR 288


>gi|154253326|ref|YP_001414150.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154157276|gb|ABS64493.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 298

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 51/332 (15%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N Q II+KK   +    ++ G+WKI YADF+T +MAFFL+MW+I+ T  + K+ +  YF 
Sbjct: 5   NQQPIILKKVKKVVH-GHHGGAWKIAYADFVTAMMAFFLLMWLISMTTPEQKQGLADYFA 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +  T+  G                                                
Sbjct: 64  PSNVSRSTSGAGGIMGGTAF---------------------------------------- 83

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                     E  +   T+          +        +E+          K  + + ++
Sbjct: 84  --------DEEGARMPGTKPQVVMTISTPAQPKSPETAEEKAAAAQVDKLLKEKSARDER 135

Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             +  A+ I   +        + + V+ + T  G+ I I+DQ    MF   ++ P   T 
Sbjct: 136 NFRSAAESIRQAMRENPDLAELSRNVIIDETPEGLRIQIVDQDGRSMFPSGNAEPYERTR 195

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +++++  +L      +SI GHTDA+P        NW L+ DRA +  ++L  +G+S DR
Sbjct: 196 QLIEEVSNILIKLPNRVSISGHTDANPVEGRPGYSNWELTADRANATRRILAGAGLSNDR 255

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           I ++ G A        DP  +ANRR+ I++  
Sbjct: 256 IYQVIGKADSEPLFPEDPYMAANRRLSIVLLR 287


>gi|84502387|ref|ZP_01000523.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597]
 gi|84389199|gb|EAQ01996.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597]
          Length = 339

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 11/308 (3%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           WK+ YADFMT +MAFFL++WI+ A+D++  + +  YF P         +G+ D       
Sbjct: 26  WKVAYADFMTAMMAFFLLLWILAASDEEALRGLADYFTPSLSQAGGKGQGMLDGTIIAPN 85

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
             Q   +         +           ++    + ++      +      +       E
Sbjct: 86  GDQGGSNTPDGNTRLPSFG---------QENPLAVFDSRLRDEATDVIVEYETKEDGTME 136

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNI 211
                    + + S  ++         + +    +R+  ++ L ++I   +   V  +++
Sbjct: 137 PKSMGEGEDEEDGSAAEQAAERQALEEQYQAEVKEREANMERLEEEIRRHIQERVDLEDL 196

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + + F+ T  G+L+ I+D+    MF + S+     T  +++ IGE +      I I GH
Sbjct: 197 GENLRFDRTSEGLLVQIMDKEGRSMFARGSARVDSRTRDLIRIIGESIVDMQNAIVITGH 256

Query: 272 TDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           TDA PF N     NW LS DRA +  +VL+ +GVS  RI +ISG A      A DP  + 
Sbjct: 257 TDAVPFVNNLGYSNWELSADRANATRRVLIDTGVSPARIKRISGLASTDPLNADDPEAAE 316

Query: 331 NRRIDILV 338
           NRRI +L+
Sbjct: 317 NRRIGVLL 324


>gi|329890064|ref|ZP_08268407.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
 gi|328845365|gb|EGF94929.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
          Length = 300

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 133/332 (40%), Gaps = 48/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           ND+ I+IKK   +    ++ G+WK+ YADF+T +MAFFL+MW+IN TD + K+ I +YF 
Sbjct: 4   NDRPILIKKVKKVAGHGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKRGIAEYFA 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +  T+  G          S   K   S                             
Sbjct: 64  PANVSASTSGSGGILGGTSLGDSEGAKGAGS----------------------------- 94

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +      E                     L   I + E       ++    AM+   
Sbjct: 95  -NAVIEQLAPEAPDAPQEAGQNSNLASASEAALRAEIARREAADFASAAESLRQAMQSMP 153

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +L+K++                + + T  G+ I ++DQ    MF+  SS P P   +
Sbjct: 154 ELAELSKQL----------------IIDQTPEGLRIQLVDQEGRSMFENGSSRPNPRAQL 197

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ + +V+      I+I GHT A    + A    +W LS  RA ++   L  +GVS DR
Sbjct: 198 LLRAVAKVINQLPNRITITGHTSAVAGSSRASSPGDWPLSSARADASRLTLQSAGVSSDR 257

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +  ++G A        DP  + NRRI I++  
Sbjct: 258 VYSVAGKAGSDPLYPDDPSLAGNRRIAIVLLR 289


>gi|295678083|ref|YP_003606607.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295437926|gb|ADG17096.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 336

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+        ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 4   KDKDRAIVVKRSAPRKH-GHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN                          KI L   +   ++S  LK G  +         
Sbjct: 63  FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 90

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            S             S   E++ ++     +  L  E     + 
Sbjct: 91  ----------------ISTDAQGVTRSTDGSSNRAERTASRNNEDSVKQLQGEL--ERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +  +  P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGHTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELVAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +++
Sbjct: 253 EAKVMRVLGLASTQNLNKADPLDPENRRISIIVLNKK 289


>gi|209515722|ref|ZP_03264585.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209503749|gb|EEA03742.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 336

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  +     ++ G+WK+ YADFMT +MAFFL+MW++++      K I  Y
Sbjct: 4   KDKDRAIVVKR-ASPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN                          KI L   +   ++S  LK G  +         
Sbjct: 63  FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 90

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            S             S+  E + +   +  +  L     L  + 
Sbjct: 91  ----------------ISTDAQGVTRSTDGSSSRAEHTASHNNDDSVKQLQG--ALERQE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +  +  P 
Sbjct: 133 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPY 192

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA P+        NW LS DRA ++ + L+  G+ 
Sbjct: 193 MRDILREIGHTLNDVPNRIIVQGHTDAVPYAGGDKGYSNWELSADRANASRRELIAGGMD 252

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 253 EAKVMRVLGLASAQNLNKADPLDPENRRISIIVLNRK 289


>gi|212636367|ref|YP_002312892.1| flagellar motor protein MotB [Shewanella piezotolerans WP3]
 gi|212557851|gb|ACJ30305.1| MotB protein [Shewanella piezotolerans WP3]
          Length = 322

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 117/328 (35%), Gaps = 23/328 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KKV  D  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKVKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  + +     
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPESTPIEIINQQTNEMTEPMLEFQEGED 111

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            S         +   G+    + + E +    +         +   +       +++ ++
Sbjct: 112 DSAGGVQQQRGEQRGGESSSTAQEQEDA----QALAKSTSESKSEASKAEAAAQEEINQQ 167

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +      L  + +   +  E+    I+I I ++     F   S    P    +++++GE+
Sbjct: 168 VKKMAQELNKEIVDGAIEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPIVRRVGEL 224

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
           L     ++++ GHTD     N     NW LS  RA +    +++  G  + R+  + G A
Sbjct: 225 LKDVPGIVTVSGHTDDWNISNELYSSNWDLSSKRAVAVAHEMIRVKGFDQQRLK-VVGMA 283

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
                + ++     + NRR++I +E  +
Sbjct: 284 SSAPLVENNSQANRARNRRVEIAIEQGK 311


>gi|127513695|ref|YP_001094892.1| flagellar motor protein MotB [Shewanella loihica PV-4]
 gi|126638990|gb|ABO24633.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 314

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 119/328 (36%), Gaps = 31/328 (9%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KKV  D  P     W   +AD M++LM FF+++   +  D    K I             
Sbjct: 3   KKVKCDCPPAGAPMWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             K  F  QN  E     K    I         +        ++  +  E  I   +   
Sbjct: 54  --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPTIEVQAGED 111

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            S                  +    E S   +E       +K++      + ++ D  KK
Sbjct: 112 DSAGGVQQQRG---------EQRGGEASSTAQEEADSEAQAKQQQQEAASQDQINDRVKK 162

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++  L+  + D     +  E+    I+I I ++     F   S    P    V++++GE+
Sbjct: 163 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVGEL 216

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
           L     +I++ GHTD     N     NW LS  RA +    L++  G  + R+  + G A
Sbjct: 217 LKDVPGIITVSGHTDDMNISNELYSSNWDLSSKRAVAVAHELVRVPGFDQQRMK-VVGMA 275

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                + +D     + NRR++I +E  +
Sbjct: 276 STAPLVPNDSAANRARNRRVEIAIEQGK 303


>gi|319405416|emb|CBI79035.1| putative flagellar motor protein MotB [Bartonella sp. AR 15-3]
          Length = 384

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 93/356 (26%), Positives = 156/356 (43%), Gaps = 21/356 (5%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
             D  Q + + II+++    D   ++ G WKI YADFMT +MA FLV+W++N  DD+ K+
Sbjct: 2   KSDDQQSSSEIIIVRRGRHDDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDEAKE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST----- 118
           AI  YFNP        +     +QN  E+  ++ +D    +      ++    +      
Sbjct: 62  AIANYFNPIKLVD-PQTSNRGIQQNDIEQDKKSSLDQEHRDDAQSEKLNTTEEAELMLNP 120

Query: 119 ------------NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                       + +   ++       +            L  +           +   S
Sbjct: 121 YPGLEKIVQSEYSAQNSAEQQFKQGDLVGQGAGDTQENLQLGTEHHDPFSPYYWKENIDS 180

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             K +N     L KE        +  + LAK ++  +    +D +   V  +  + G++I
Sbjct: 181 SQKRKNQKQKTLVKETTQENNFSENSRALAKDLTDLIEETNSDIL---VHVKPIKEGVMI 237

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            ++DQ    MF    S+P   TI ++  +  ++A     I I GHTDA P+R+   DNW+
Sbjct: 238 ELMDQPKYEMFKVGLSVPTARTIDLIASMAGIIAKHQGDIVISGHTDARPYRSTVYDNWQ 297

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           LS  RA  AY +L++ G+ E RI ++ G+A   LK   DP  + NRRI I + D +
Sbjct: 298 LSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353


>gi|157373190|ref|YP_001471790.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
 gi|157315564|gb|ABV34662.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
          Length = 336

 Score =  189 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 137/329 (41%), Gaps = 44/329 (13%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            ++ +IIK++     +  + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY N
Sbjct: 4   KNEPLIIKRRKRQKRSATHGGAWKVAFADFTLAMMALFMVLWILQIADQQERTMIVQYLN 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                              P   SQ+   + +   I      +    T  +K    + N+
Sbjct: 64  ---------GDMFASGSINPFDLSQSPSMIDLQGSIALQQAIIPATGTGVEKAGPAIHNH 114

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I    ++ ++                                   P L+       + + 
Sbjct: 115 IPVGEDNAKAGRG--------------------------------PELNSLVPGKFETQA 142

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ LA+++ S ++ +   N+   V  +    G+ I I D  +  MF + SS   P    
Sbjct: 143 QLEFLAREVDSVITEV---NLSANVEIKVVPQGVRILIHDNVHQFMFTRGSSNMKPYFED 199

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +G +L      ISI GHTD++P+      NW LS  RA  A +VL   GV   +I 
Sbjct: 200 LLMALGPLLGGVENKISISGHTDSTPYAGKTFTNWELSSKRALLARRVLEYGGVKRHQII 259

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++G A     I +DP  +ANRRI++LV 
Sbjct: 260 QVTGMADQSPYIQNDPAAAANRRIEMLVL 288


>gi|323529505|ref|YP_004231657.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323386507|gb|ADX58597.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 328

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 136/343 (39%), Gaps = 63/343 (18%)

Query: 2   NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
                + QE    II+++ K A D   ++ G+WKI YADF+T +MAFFL+MW++ +T   
Sbjct: 4   RRSRGEEQEVPPPIIVRRSKKADDHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKF 63

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            K+ IE YFN    +L+  ++G    +    +     I  +      K  ++        
Sbjct: 64  DKQGIEDYFNTPLSSLLGGNEGAAAARPSVVQGGGRDISDTRPGDGKKTQIE-------- 115

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                                                    ++  ++   +   L  L +
Sbjct: 116 ------------------------------------AATPVNVVPTVAPADAARLQQLKE 139

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           + I  +++   L+    +I                    T  G+ I I+D +N PMF   
Sbjct: 140 KLISLIEQSPALKAFKDQIR----------------ISITNEGLRIEIVDSQNRPMFASG 183

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           S       + +L +IG  L      ISI GHTDA P+        NW LS +RA +A + 
Sbjct: 184 SPRLQTYAVAILTQIGAALNDVDNRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 243

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+  +++ ++ G A      ++      NRRI ILV ++
Sbjct: 244 LVSGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 286


>gi|295690006|ref|YP_003593699.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295431909|gb|ADG11081.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 299

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 44/333 (13%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            ++Q I+IKK   +    ++ G+WK+ YADF+T +MAFFL+MW++N T  + K+ I  YF
Sbjct: 4   SSEQPILIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P   +  T+  G                            V   +    Q      L  
Sbjct: 64  APASISSTTSGSGGILGGTSLGDDGAKSDGKMSAIQQMAPEVPDNVEKDGQSTDTANLS- 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                            L  ++ K+E       ++    +++  
Sbjct: 123 ---------------------------SASEQALRDALAKKEQDSFASAAQSLRQSLQDM 155

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L +L+K+I                L + T  G+ I ++DQ    MF ++S +P     
Sbjct: 156 PELAELSKQI----------------LIDQTPEGLRIQLVDQEGRSMFQENSKVPNDRAR 199

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           ++L+ + +V+      ++I GHT AS +      +W LS  RA ++ Q+L  +GV +DRI
Sbjct: 200 ILLRAVAKVITQLPNRVTISGHTSASAYGKKQDGDWSLSASRADASRQILRAAGVDDDRI 259

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++SG A+     A DP  + NRRI I++   +
Sbjct: 260 YQVSGKANSEPLYADDPTLAGNRRISIVLLREK 292


>gi|327482425|gb|AEA85735.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
          Length = 337

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 88/334 (26%), Positives = 130/334 (38%), Gaps = 64/334 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N Q II+K+   +    ++ G+WKI +ADF T +MAFFLVMW++++   + KK I  YF
Sbjct: 2   DNTQPIIVKRVKKVA-GGHHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   +AS  + D    P  S    ++    E  +K+                    
Sbjct: 61  QDPIGFTESASPHVIDLGGTPTPSPDRTLNQVEQEPASKD-------------------- 100

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                           D E++    E      L         + 
Sbjct: 101 -----------------------------AQFDSEQAETLAEQLERERLDLVLQELQNKV 131

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
               +L K     L  +  D              + I I+D  N PMF   S+   P   
Sbjct: 132 DENPELQKFKDQILFEITQDG-------------LRIQIMDAENRPMFALGSAQLQPYFE 178

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + E +A     ISI GHTDA PF       NW LS  RA +A + L+  G  E++
Sbjct: 179 DILLALVETIAAVPNKISISGHTDAKPFSGRGDFGNWELSASRANAARRTLVYGGYPEEQ 238

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I+++ G+A   L    DP N  NRRIDILV  ++
Sbjct: 239 IARVVGYASSALFDRKDPFNPVNRRIDILVLTKK 272


>gi|89902463|ref|YP_524934.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89347200|gb|ABD71403.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 314

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 60/337 (17%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q II+KK         + G+WKI YADF+T +MAFFL+MW++ +T +  KK +  
Sbjct: 4   DGKKLQPIIVKKIKKGGH-VVHGGAWKIAYADFVTAMMAFFLLMWLLGSTSEGDKKGLSD 62

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF+   K  M    G             N I       +T+ S   + G  +   Q +  
Sbjct: 63  YFSAPLKVSMQGGSGA---------GGSNTILPGGGADLTQKSGQNRRGDGSDPMQKRMA 113

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N +      Q ++       + S       K T+                         
Sbjct: 114 ANAVKAEVAKQDAKKLAGISAKISALISGNTKLTE------------------------- 148

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
                                    + +  ETT  G+ I I+D +  PMFD  S++  P 
Sbjct: 149 -----------------------FSRQIRLETTADGLQIQIVDDQKRPMFDSGSAVVKPY 185

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTD+SP+ +      NW LS DRA ++ + L+ +G+ 
Sbjct: 186 MRDILREIGGALNGVENKISLDGHTDSSPYSSAQRGYSNWELSSDRANASRRELVAAGMP 245

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +D+++++ G A   L    +P  + NRRI I V  R+
Sbjct: 246 DDKLARVVGLASSILLDPENPTGAVNRRISITVMTRE 282


>gi|323527738|ref|YP_004229891.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323384740|gb|ADX56831.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 335

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A   + ++ G+WK+ YADFMT +MAFFL+MW++++      K I  Y
Sbjct: 3   KDKDRAIVVKR-SAPKKSGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASSAQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +       ++ +  +                                     
Sbjct: 62  FNQPLKITLWGGDRSAEDSSILKGG----------------------------------- 86

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                    +        +TR S+   +    T    S +  +            L  + 
Sbjct: 87  --------GRDISTDSQGVTRTSDGSINRSDRTVAHGSEDAMKQLQGE-------LERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA  +        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DPM+  NRRI I+V +R+
Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRK 288


>gi|71906362|ref|YP_283949.1| flagellar motor protein MotB [Dechloromonas aromatica RCB]
 gi|71845983|gb|AAZ45479.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 316

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 63/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            ++ + I+IK+K  +     + G+WKI YADF+T +MAFFL+MW++ +T     + I  +
Sbjct: 3   DDSTRPIVIKRKKVVA-GGAHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLQGIADF 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K       G               I     + +T+ S  +K G    KK      
Sbjct: 62  FQNPLKVSQQGGAG---------SGDATSILQGGGKDLTRQSGQVKRGDVEAKKSTSF-- 110

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                               +     K 
Sbjct: 111 ------------------------------------------------SKEAQAEFRRKE 122

Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L   I   +          K +L + T  G+ I I+D++N PMFD SS+   P 
Sbjct: 123 QERLESLKASIEKMIEQSPQLAQFKKQMLLDITSEGLRIQIVDEQNRPMFDSSSADLKPY 182

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
           T  +L++IG+ L   +  IS+ GHTDA+ F        NW LS +RA ++ + L+  G+ 
Sbjct: 183 TRDILRQIGKALNGVSNRISLAGHTDAAQFAGGEKGFSNWELSANRANASRRELVVGGMD 242

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ ++ G A   L   +DP+NS NRRI I+V +++
Sbjct: 243 DSKVLRVVGLASTVLFDKNDPLNSVNRRISIVVLNQK 279


>gi|113971062|ref|YP_734855.1| flagellar motor protein MotB [Shewanella sp. MR-4]
 gi|114048292|ref|YP_738842.1| flagellar motor protein MotB [Shewanella sp. MR-7]
 gi|117921338|ref|YP_870530.1| flagellar motor protein MotB [Shewanella sp. ANA-3]
 gi|113885746|gb|ABI39798.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
 gi|113889734|gb|ABI43785.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
 gi|117613670|gb|ABK49124.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 306

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/325 (19%), Positives = 114/325 (35%), Gaps = 36/325 (11%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +  P     W   +AD M++LM FF+++   +  D    K I               K
Sbjct: 3   KCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------K 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I         D        ++  +  E  + Y +    S 
Sbjct: 52  YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSA 111

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                       G+    + +   ++  E                  + ++    KK++ 
Sbjct: 112 GGVQQQNGSQRGGEASATAQETADAVKAEAAAA--------------QDKINQQVKKMAQ 157

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L+  + D     +  E+    I+I I ++     F   S    P    V++ +GE+L  
Sbjct: 158 ELNNEITDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              +I++ G+TD     +     NW LS  RA +   VL++  G    R+  + G A + 
Sbjct: 212 VPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMK-VVGMASNN 270

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
             + +D     + NRR++I +E  +
Sbjct: 271 PIVPNDSPENRARNRRVEIAIEQGK 295


>gi|291613013|ref|YP_003523170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291583125|gb|ADE10783.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 341

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E+ + I+IK+   +    ++ G+WKI YADF+T +MAFFL+MW++ +T     + I +YF
Sbjct: 4   EDKRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLQGISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  +    G  D  +  +            + +T+ +  +K G    +K+   L+ 
Sbjct: 63  KTPLKVALMGGTGSGDSSSIIKGG---------GQDLTRATGQVKSGELLPEKKVINLK- 112

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                              E++   K  
Sbjct: 113 ---------------------------------------------ATQEEFERLERKKEL 127

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++L+DL   I   +   +        +L + T  G+ + I+D++N PMF   SS   P T
Sbjct: 128 EKLKDLKANIEKAIDTDVKLKKYKNQILLDLTTEGLRVQIVDEKNRPMFQSGSSELEPYT 187

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L +IG++L      IS+ GHTDA P+        NW LS DRA ++ + L+  G++E
Sbjct: 188 KDILHEIGQMLNTMPNKISLSGHTDAQPYVTADRHYSNWELSADRANASRRELINGGLAE 247

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           D+I ++ G +   L   + P+N  NRRI I+V +++
Sbjct: 248 DKIVRVVGLSSAVLFDKAQPLNPINRRISIIVMNKR 283


>gi|187925787|ref|YP_001897429.1| flagellar motor protein MotB [Burkholderia phytofirmans PsJN]
 gi|187716981|gb|ACD18205.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 335

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I  Y
Sbjct: 3   KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN                          KI L   +   ++S  LK G  +         
Sbjct: 62  FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            S             +   E S        +  L  E     + 
Sbjct: 90  ----------------ISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQLQGEL--ERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA+ +        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DPM+  NRRI I+V +R+
Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRK 288


>gi|212637803|ref|YP_002314328.1| MotB protein [Shewanella piezotolerans WP3]
 gi|212559287|gb|ACJ31741.1| MotB protein [Shewanella piezotolerans WP3]
          Length = 330

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 44/331 (13%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + I+I++K      P + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY  
Sbjct: 4   RPEPIVIRRKKRTKAKPGHGGAWKVAFADFTLAMMALFMVLWIMQIADQQERTMIVQYLK 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
             G    T S   FD    P       ID   +  I +  +       ++          
Sbjct: 64  --GDLYSTGSINPFDLSRSPSL-----IDFQGNIAIQQAVLPATSTGVDRSGPAMHNHIP 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +                                    +  +    P L+       + + 
Sbjct: 117 LGK----------------------------------DNVKAGIGPELNSLVPGKFETQA 142

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ LA++I   ++ +  +     V  +    G+ I + D  N  MF + SS   P    
Sbjct: 143 QLEFLAREIEQVITDVSMNA---NVELQVVPQGVRILMHDNINQFMFTRGSSNMKPYFED 199

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +G +L      +SI GHTD+SP+      NW LS  RA  A +VL  SGV  D++ 
Sbjct: 200 LLMALGPILGKVENKMSISGHTDSSPYAGKTFTNWELSSKRALLARRVLEYSGVQRDQVI 259

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +++G A     IA DP  +ANRRI++LV   
Sbjct: 260 QVTGMADQAPYIADDPAAAANRRIEMLVMTS 290


>gi|296157481|ref|ZP_06840316.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295892253|gb|EFG72036.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 335

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 140/337 (41%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I  Y
Sbjct: 3   KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +       ++ +  +                                     
Sbjct: 62  FNQPLKVTLWGGDRSAEDSSILKGG----------------------------------- 86

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            S             +   E+S++      +  L  E     + 
Sbjct: 87  -------------GRDISTDAQGVTRSTDGSNNRSERSVSHNNEDSMKQLQGEL--ERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA+ +        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DPM+  NRRI I+V +++
Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNKK 288


>gi|114705809|ref|ZP_01438712.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
 gi|114538655|gb|EAU41776.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
          Length = 407

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 94/396 (23%), Positives = 153/396 (38%), Gaps = 60/396 (15%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
            +    + Q II+ ++       ++ G WKI +ADFMT +MAFFLVMW+ N+TD+ T+  
Sbjct: 12  SEAGHRDHQEIIVVRRRGGGHDEHHGGVWKIAFADFMTAMMAFFLVMWLTNSTDEATRTQ 71

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ- 123
           + QYFNP      T +     E+            L  +E + K+      G     ++ 
Sbjct: 72  VAQYFNPIQLTDSTPASKGLKERQAQSEVEDENQGLVEEEIVGKSGGQPLAGDETGGEEQ 131

Query: 124 ------------------------------------------YQRLENNIFYLSNSQQSE 141
                                                     Y+   +   +  +    E
Sbjct: 132 ALFRDPYAVLAEIAANSVSTGSGDNEGEPDGTGLTGLNGGDAYRDPFDPQSWQLSPNMRE 191

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK----------- 190
                      + K      +  ++   E +      +     A    +           
Sbjct: 192 SGGELDDLPPAEFKTAVLPPEGTEASETESSAEETGETTVAAKAATGAETDLETEAETAE 251

Query: 191 -----RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                R  DL   I + L+ +  + +   V       G++IS+ D  ++ MF   S+ P 
Sbjct: 252 AAATSRTADLKSDIEAELADM-GEGVPSQVEVSEGEGGLMISLADDFDSGMFSVGSAKPN 310

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
              + +++KI  VL      I IRGHTDA PF +   DNWRLS  RA+ AY +L + G+ 
Sbjct: 311 GAAVQMMEKIANVLKTRNGRIIIRGHTDARPFTSENYDNWRLSTARAHMAYYMLTRGGLG 370

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +R+  I GFA  + K A +P    NRRI+IL+ + 
Sbjct: 371 AERVESIEGFADRQPKDAENPEADINRRIEILLVED 406


>gi|307731388|ref|YP_003908612.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307585923|gb|ADN59321.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 335

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A   + ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KDKDRAIVVKR-SAPKKSGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN                          KI L   +   ++S  LK G  +         
Sbjct: 62  FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            S             S   E++++      +  L  E     + 
Sbjct: 90  ----------------ISTDAQGVTRSTDGSSNRAERTVSHSNEDSMKQLQGEL--ERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA  +        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DP++  NRRI I+V +R+
Sbjct: 252 EAKVMRVLGLASTQNLNKADPLDPENRRISIIVLNRK 288


>gi|74317262|ref|YP_315002.1| flagellar motor protein MotB [Thiobacillus denitrificans ATCC
           25259]
 gi|74056757|gb|AAZ97197.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 319

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 63/336 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    II+K+        ++ G+WKI YADF+T +MAFFL+MW++ +T     + I +YF
Sbjct: 3   EQKAPIIVKRIKKTS-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTRGDLEGIAEYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  M    G  D  +  +              +T+ +  +K G  +  ++   L  
Sbjct: 62  KTPLKVAMQGGTGSGDSSSVIKGG---------GADLTRKNGQIKKGEVDADRKSYNL-- 110

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                            + +  L     
Sbjct: 111 ------------------------------------------------KAAQAELERLET 122

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +L+ L +++ + +          + +L + T  G+ I I+D++N PMF+ +S+   P T
Sbjct: 123 AKLKQLKQRLEAAIDRNPTLKQFKRQLLIDITSEGLRIQIVDEQNRPMFNLASAELQPYT 182

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
            V+L +I +VL      IS+ GHTDA P+ N      NW LS DRA ++ + L+  G+SE
Sbjct: 183 KVILHEIAQVLNDVENRISLSGHTDARPYANGERGYSNWELSADRANASRRELIVGGMSE 242

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A       + P +  NRRI I+V +++
Sbjct: 243 AKMLRVVGLASSVPFTQAKPFDPVNRRISIIVLNKR 278


>gi|254419004|ref|ZP_05032728.1| OmpA family protein [Brevundimonas sp. BAL3]
 gi|196185181|gb|EDX80157.1| OmpA family protein [Brevundimonas sp. BAL3]
          Length = 297

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 49/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +D+ I+IKK   +    ++ G+WK+ YADF+T +MAFFL+MW+IN TD + KK I +YF 
Sbjct: 2   SDRPILIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKKGIAEYFA 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +  T+  G                                                
Sbjct: 62  PASVSETTSGSGGILGGTALGDDGPKSSGSQS---------------------------- 93

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +      E   ++ T  S           L+  I K E       ++    AM+   
Sbjct: 94  ---VLEQLAPEAPADATTAGSSTNLASASEAALQAEIQKREAAEFASAAESLRQAMQSMP 150

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +L+K++                + + T  G+ I ++DQ    MFD +S+ P     V
Sbjct: 151 ELAELSKQL----------------IVDQTPEGLRIQLVDQEGRSMFDNNSARPNARAQV 194

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ + +V+      ISI GHT A+P  N A    +W LS +RA  +  VL  +GV  DR
Sbjct: 195 LLRAVAKVINQLPNRISITGHTSATPGSNRASGPADWTLSSERANGSRLVLQSAGVDADR 254

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +  ++G A        DP  + NRRI I++  
Sbjct: 255 VYSVAGKAGSDPLYPDDPTLAGNRRIAIVLLR 286


>gi|304412488|ref|ZP_07394094.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307307147|ref|ZP_07586885.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|304349130|gb|EFM13542.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306910386|gb|EFN40817.1| OmpA/MotB domain protein [Shewanella baltica BA175]
          Length = 306

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 61/332 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             ++ IIIK++        + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY 
Sbjct: 3   HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                       G  +   P      ++    ID     +     I S++  +  +    
Sbjct: 63  R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSITPPIIPSSSMPRGGESEGL 111

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               L   Q                                                  +
Sbjct: 112 EEGTLIPGQ-----------------------------------------------FDTQ 124

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L  LA++++  +       + + +       GI I I D  N  MF + S+   P   
Sbjct: 125 AQLTVLARELNRVVQNSS---MAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  +G +L + T  + I GHTD++P+      NW LS +RA  A +VL + GV  D++
Sbjct: 182 ELLLSLGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQV 241

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +++G A     IA+D   +ANRRI+ L+   
Sbjct: 242 IQVTGMADQIPYIATDTAAAANRRIEALILTS 273


>gi|24373103|ref|NP_717146.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
 gi|24347292|gb|AAN54590.1|AE015599_2 sodium-driven polar flagellar protein PomB [Shewanella oneidensis
           MR-1]
          Length = 308

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 114/325 (35%), Gaps = 36/325 (11%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +  P     W   +AD M++LM FF+++   +  D    K I               K
Sbjct: 3   KCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKYKQIAGSM-----------K 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I         D        ++  +  E  +   +    S 
Sbjct: 52  YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDLQAGEDDSS 111

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                       G+    + + E                 K  A   + ++    KK++ 
Sbjct: 112 GGTQQQNGSQRGGEASATAQETE--------------DAVKAEAAAAQDKINQQVKKMAQ 157

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L+  +AD     +  E+    I+I I ++     F   S    P    V++ +GE+L  
Sbjct: 158 ELNQEIADGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              +I++ G+TD     +     NW LS  RA +   VL++  G    R+  + G A + 
Sbjct: 212 VPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMK-VVGMASNN 270

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
             + +D     + NRR++I +E  +
Sbjct: 271 PIVPNDSPDNRARNRRVEIAIEQGK 295


>gi|114563951|ref|YP_751465.1| flagellar motor protein MotB [Shewanella frigidimarina NCIMB 400]
 gi|114335244|gb|ABI72626.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 308

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 123/327 (37%), Gaps = 36/327 (11%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   D  P     W   +AD M++LM FF+++   +  D    K I              
Sbjct: 3   KAKCDCPPAGAPMWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K  F  QN  E     K    I         D        ++  +  +  I Y +  + 
Sbjct: 53  -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTQPTIEYQAGEED 111

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           S       + +   G     +    +++              K  A   ++ + D  KK+
Sbjct: 112 SAGGTQKQSGEQRGGNAAATAQQEAEAV--------------KKDAASSQENINDQVKKM 157

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+  + D     +  E+    I+I I ++     F   S    P+   +++ IGE+L
Sbjct: 158 AEKLNEEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPKFKPIVRSIGELL 211

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
                +I++ GHTD +   N     NW LS  RA +    L + SG  E R+  + G A 
Sbjct: 212 KDVPGIITVSGHTDGADINNELYSSNWELSSQRAVAVAHELRRVSGFDESRMK-VVGEAS 270

Query: 318 HRLKIASDPMN--SANRRIDILVEDRQ 342
           +R  +A+D     + NRR++I +E  +
Sbjct: 271 NRPLVANDSNENQARNRRVEISIEQGK 297


>gi|302878239|ref|YP_003846803.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302581028|gb|ADL55039.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 328

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 59/339 (17%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
              +N + I+IK+   +    ++ G+WKI YADF+T +MAFFL+MW++ +T       I 
Sbjct: 2   AEDKNKRPIVIKRIKKVA-AGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLAGIS 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           QYF    K  +    G  D  +  +            + +T+ +  +K G     K+   
Sbjct: 61  QYFKTPLKVALAGGSGSGDSSSIIKGG---------GKDLTRTTGQVKAGDVASDKRIIN 111

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           ++                                                     +    
Sbjct: 112 VKE----------------------------------------------SQQEYLRAERE 125

Query: 187 KRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           K   +L++L + I   + +          +L + T  G+ I I+D++N PMF    +   
Sbjct: 126 KEMTKLKELKESIEKAIDNSEKLKQFKSQILLDITSEGLRIQIVDEKNRPMFQSGRAQLE 185

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303
           P T  +L  IG+ L      +SI GHTDAS +        NW LS DRA ++ + L+  G
Sbjct: 186 PYTREILHAIGQTLNDVPNKVSISGHTDASVYGGGGIGYSNWELSADRANASRRELIAGG 245

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++I ++ G +   L    DP++  NRRI +++ +++
Sbjct: 246 MADEKIVRVVGLSSAVLFKKEDPLSPTNRRISLIIMNKK 284


>gi|319944147|ref|ZP_08018425.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
 gi|319742641|gb|EFV95050.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
          Length = 309

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 76/334 (22%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q I++K+        ++ G+WKI YADF+T +MAFFL+MW++++  ++T K I +YF 
Sbjct: 8   KAQPIVVKRIKKAAH-GHHGGAWKIAYADFVTAMMAFFLLMWLLSSASENTLKGISEYFQ 66

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +    G+ D   P                +T+    +  G T  K         
Sbjct: 67  QPLKLSLIGGSGVGDATAPVPGG---------GTDLTRKDGQVNKGITKGKDS------- 110

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                  +++  L  L +    ++ +  
Sbjct: 111 ---------------------------------------KKDVKLQKLKERLEASIMQVP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETI 249
            L+ L  +I                  E T  G+ I I+D    P+F    S++  P   
Sbjct: 132 ALEALRDQIR----------------LEMTVDGLSIQIVDASKKPLFASGKSTVLSPNMR 175

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSE 306
            +++ IG++L      +S+ GHTDA+P+   +     NW LS +RA S+ + L++ G+  
Sbjct: 176 ELMRTIGKLLNEVENPVSLSGHTDATPYAGGSTGGYSNWELSTERANSSRRELVQGGMDP 235

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           ++I ++ G         ++P +  NRRI I+V +
Sbjct: 236 NKILRVQGLGAVVPLDKTNPNDPMNRRIAIVVLN 269


>gi|91785660|ref|YP_560866.1| flagellar motor protein MotB [Burkholderia xenovorans LB400]
 gi|91689614|gb|ABE32814.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 335

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 54/338 (15%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           N++ D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I  
Sbjct: 2   NKDKDRAIVVKR-AAPKKASHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAD 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YFN                          KI L   +   ++S  LK G  +        
Sbjct: 61  YFNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD-------- 89

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                             S             +   E+S++      +  L  E     +
Sbjct: 90  -----------------ISTDAQGVTRSTDGSNNRSERSVSHNNEDSVKQLQGEL--ERR 130

Query: 188 RKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P
Sbjct: 131 EQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEP 190

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304
               +L++IG  L      I ++GHTDA+ +        NW LS DRA ++ + L+  G+
Sbjct: 191 YMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGM 250

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            E ++ ++ G A  +    +DPM+  NRRI I+V +++
Sbjct: 251 DEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNKK 288


>gi|260222452|emb|CBA32030.1| Chemotaxis protein motB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 313

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 60/337 (17%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T +  KK I  
Sbjct: 4   DAKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDKKGISD 62

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K            Q      + N +       +T+++   K G           
Sbjct: 63  YFQSPLKVA---------LQGGAGAGASNSVITGGGNDLTQSAGQSKRGEG--------- 104

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                  +EK          +    K++   L  L+ +    + 
Sbjct: 105 -----------------------TEKSAKKNAGEQRKIERAKKDAQTLAALAAKIASTIS 141

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              ++ + + +I   +                T  G+ I I+D +  PMFD  SS   P 
Sbjct: 142 NNPKMAEFSSQIKLEI----------------TPDGLQIQIVDDQRRPMFDIGSSSVKPY 185

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  LA     IS+ GHTD +P+ N A    NW LS DRA ++ + L+ +G+ 
Sbjct: 186 MRDILKEIGVTLADVDNKISLDGHTDQTPYGNAARGYSNWELSADRANASRRELIAAGMP 245

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E++++++ G A   L    +P++ ANRRI ILV  ++
Sbjct: 246 ENKLARVVGMASSLLADPQNPLSPANRRISILVMTKE 282


>gi|121596103|ref|YP_987999.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
 gi|120608183|gb|ABM43923.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
          Length = 313

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+       P + G+WKI YADFMT +MAFFL+MW++ +T     + I  Y
Sbjct: 3   EKKLQPIIIKRAKKRPHAP-HGGAWKIAYADFMTAMMAFFLLMWLLGSTAKGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+   K  M    G  +  +                 ++K    ++  +++         
Sbjct: 62  FSSPLKVAMQGGDGAGNSSSVIPGG---------GNDLSKVHGQVRRSNSDSPTN----- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   +++   +  L  +    +  
Sbjct: 108 ---------------------------MRSSVEASRAERARQDAQRIKALQTKIEAMITE 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I   L                T  G+ I I+D +N PMFD  S++  P  
Sbjct: 141 SPRLNEYRSQIRLDL----------------TPDGLQIQIVDDQNRPMFDSGSALVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L +IG  L      IS+ GHTDA P+ N      NW LS DRA ++ + L+ +G+ +
Sbjct: 185 RDILHQIGAALGGVENRISLSGHTDAVPYGNGDRGYSNWELSADRANASRRELVAAGMPD 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A   L    +P  + NRRI I V   +
Sbjct: 245 AKLGRVVGMAASDLLEPQNPRAAVNRRITITVLTHE 280


>gi|126176136|ref|YP_001052285.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|125999341|gb|ABN63416.1| OmpA/MotB domain protein [Shewanella baltica OS155]
          Length = 306

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 61/332 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             ++ IIIK++        + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY 
Sbjct: 3   HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                       G  +   P      ++    ID     +     I S++  +  +    
Sbjct: 63  R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPPIIPSSSMPRGGESEGL 111

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               L   Q                                                  +
Sbjct: 112 EEGTLIPGQ-----------------------------------------------FDTQ 124

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L  LA++++  +       + + +       GI I I D  N  MF + S+   P   
Sbjct: 125 AQLTVLARELNRVVQNSS---MAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  +G +L + T  + I GHTD++P+      NW LS +RA  A +VL + GV  D++
Sbjct: 182 ELLLSLGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQV 241

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +++G A     IA+D   +ANRRI+ L+   
Sbjct: 242 IQVTGMADQIPYIATDTAAAANRRIEALILTS 273


>gi|120599624|ref|YP_964198.1| flagellar motor protein MotB [Shewanella sp. W3-18-1]
 gi|146292382|ref|YP_001182806.1| flagellar motor protein MotB [Shewanella putrefaciens CN-32]
 gi|120559717|gb|ABM25644.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
 gi|145564072|gb|ABP75007.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
 gi|319425682|gb|ADV53756.1| stator-force generator of Na+ coupled flagellar motor, PomB
           [Shewanella putrefaciens 200]
          Length = 308

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 114/325 (35%), Gaps = 36/325 (11%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P     W   +AD M++LM FF+++   +  D    K I               K
Sbjct: 3   KCKCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I         D        ++  +  E  + + +    S 
Sbjct: 52  FAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDFQAGEDDSA 111

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                   +   G+    + +  +++  +                  + ++    KK++ 
Sbjct: 112 GGVQQQRGEQRGGEASSTAQETAEAVKADAAAA--------------QDKINQQVKKMAQ 157

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L+  + D     +  E+    I+I I ++     F   S    P    V++ +GE+L  
Sbjct: 158 ELNKEIIDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              VI++ G+TD     +     NW LS  RA +    L++  G    R+  + G A + 
Sbjct: 212 VPGVITVAGYTDDMQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMK-VVGMASNN 270

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
             + +D     + NRR++I +E  +
Sbjct: 271 PIVPNDSPENRARNRRVEIAIEQGK 295


>gi|315180895|gb|ADT87809.1| sodium-driven polar flagellar protein [Vibrio furnissii NCTC 11218]
          Length = 320

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 111/326 (34%), Gaps = 29/326 (8%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 4   QKCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 53  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGDADR 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G+    +T                 ++ +    + +   +++   + 
Sbjct: 113 AGGTQRDAGQLTGGQSPETAT----------QDNQNTETEMQQQQAQSQSMSEEMETVLE 162

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S    L  +     +  E     I+I I ++     F + S+   P+   ++++I +++ 
Sbjct: 163 SIKKALQREIEQGAIEVENLGQQIVIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD     +   R NW LS  RA S  Q + K  G +  R+ ++ G A  
Sbjct: 220 DVPGIVRVSGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRL-QVRGMADT 278

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
                +D     S NRR++I +   +
Sbjct: 279 DPLGPNDTEAQRSRNRRVEISIMQGE 304


>gi|126173599|ref|YP_001049748.1| flagellar motor protein MotB [Shewanella baltica OS155]
 gi|152999879|ref|YP_001365560.1| flagellar motor protein MotB [Shewanella baltica OS185]
 gi|160874504|ref|YP_001553820.1| flagellar motor protein MotB [Shewanella baltica OS195]
 gi|217974157|ref|YP_002358908.1| flagellar motor protein MotB [Shewanella baltica OS223]
 gi|304409470|ref|ZP_07391090.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307303828|ref|ZP_07583581.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|125996804|gb|ABN60879.1| OmpA/MotB domain protein [Shewanella baltica OS155]
 gi|151364497|gb|ABS07497.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|160860026|gb|ABX48560.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|217499292|gb|ACK47485.1| OmpA/MotB domain protein [Shewanella baltica OS223]
 gi|304351988|gb|EFM16386.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306912726|gb|EFN43149.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|315266742|gb|ADT93595.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 310

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 116/327 (35%), Gaps = 36/327 (11%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   +  P     W   +AD M++LM FF+++   +  D    K I              
Sbjct: 3   KAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K  F  QN  E     K    I         D        ++  +  E  + Y +    
Sbjct: 53  -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDD 111

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           S       +     G+    + ++  ++  E                  + ++    KK+
Sbjct: 112 SAGGVQQQSGSQRGGEATATAQEVADAVKAEAAAA--------------QDKINQEVKKM 157

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+  + D     +  E+    I+I I ++     F   S    P    V++ +GE+L
Sbjct: 158 AQELNKEITDGA---IEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPVVRSVGELL 211

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
                +I++ G+TD     +     NW LS  RA +    L++  G    R+  + G A 
Sbjct: 212 KDVPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMK-VVGMAS 270

Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342
           +   + +D     + NRR++I +E  +
Sbjct: 271 NNPIVPNDSPENRARNRRVEIAIEQGK 297


>gi|285019703|ref|YP_003377414.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
 gi|283474921|emb|CBA17420.1| probable flagellar motor protein [Xanthomonas albilineans]
          Length = 383

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 58/334 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ YADF+T +MAFFLV+W++ AT  + + AI +Y 
Sbjct: 3   ETKSTVIIRRVKKVQGGGHHGGAWKVAYADFVTAMMAFFLVLWLVAATTKEQRAAIAEY- 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                         F   +P    S               S+    GS   ++       
Sbjct: 62  --------------FRNPSPLAGKSPAPSPGMAGPGGASTSMIKLGGSGELQRG------ 101

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                               + +   +  L     +     K K
Sbjct: 102 -----------------------------------NNKDPFGSKSLKGDDSKISQREKEK 126

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++   +      +     +L + T  G+ I I+D+ N PMFD  S++  P T
Sbjct: 127 QRLESLMQEMKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKENRPMFDLGSAVLKPYT 186

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L ++   +      ISI GHTD + +       NW LS DRA +A + L+  G+SED
Sbjct: 187 RGILHELSGFINQVPNHISITGHTDVTQYSGKNGYSNWELSADRANAARRELVAGGMSED 246

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++S++ G +   L     P N  NRRI I+V  +
Sbjct: 247 KVSRVVGLSSSVLFDKQVPNNPINRRISIVVMTK 280


>gi|120597323|ref|YP_961897.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|120557416|gb|ABM23343.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
          Length = 305

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 62/332 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             ++ IIIK++        + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY 
Sbjct: 3   HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                       G  +   P      ++    ID     +     I S    +       
Sbjct: 63  R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPTIIPSHPSPRAGAEGIE 111

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               +                                                      +
Sbjct: 112 EGALIPG------------------------------------------------QFDTQ 123

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++L  LA++++  +       + + +       GI I I D  N  MF + S+   P   
Sbjct: 124 EQLTVLARQLNRVVQSSS---MAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  +G +L + T  + I GHTD++P+      NW LS +RA  A +VL + GV  D++
Sbjct: 181 ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV 240

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +++G A     I SD   +ANRRI+ L+   
Sbjct: 241 IQVTGMADQVPYITSDTAAAANRRIEALILTS 272


>gi|170694367|ref|ZP_02885521.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170140790|gb|EDT08964.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 335

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 54/337 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++ D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW++++      K I +Y
Sbjct: 3   KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN                          KI L   +   ++S  LK G  +         
Sbjct: 62  FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                             ++ D++        ++        ++        +  L  + 
Sbjct: 90  ------------------ISTDAQGVTRSTDGSNNRAERTVSKSSEDSMKQLQGELERRE 131

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +    V     + +  ++T TG+ I I+D +  PMF  +     P 
Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPY 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      I ++GHTDA+ +        NW LS DRA ++ + L+  G+ 
Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMD 251

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A  +    +DPM+  NRRI ++V +R+
Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISVIVLNRK 288


>gi|146294532|ref|YP_001184956.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|145566222|gb|ABP77157.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 305

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 62/332 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             ++ IIIK++        + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY 
Sbjct: 3   HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                       G  +   P      ++    ID     +     I S    +       
Sbjct: 63  R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPAIIPSHPSPRAGAEGIE 111

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               +                                                      +
Sbjct: 112 EGALIPG------------------------------------------------QFDTQ 123

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++L  LA++++  +       + + +       GI I I D  N  MF + S+   P   
Sbjct: 124 EQLTVLARQLNRVVQSSS---MAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  +G +L + T  + I GHTD++P+      NW LS +RA  A +VL + GV  D++
Sbjct: 181 ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV 240

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +++G A     I SD   +ANRRI+ L+   
Sbjct: 241 IQVTGMADQVPYITSDTAAAANRRIEALILTS 272


>gi|260767264|ref|ZP_05876205.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
 gi|260617772|gb|EEX42950.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
          Length = 320

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 111/326 (34%), Gaps = 29/326 (8%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 4   QKCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 53  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGDADR 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G+    +T                 ++ +    + +   +++   + 
Sbjct: 113 AGGTQRDAGQLTGGQSPETAT----------QDNQNTETEMQQQQAQSQSMSEEMETVLE 162

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S    L  +     +  E     I+I I ++     F + S+   P+   ++++I +++ 
Sbjct: 163 SIKKALQREIEQGAIEVENLGQQIVIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD     +   R NW LS  RA S  Q + K  G +  R+ ++ G A  
Sbjct: 220 DVPGIVRVSGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRL-QVRGMADT 278

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
                +D     S NRR++I +   +
Sbjct: 279 DPLGPNDTEAQRSRNRRVEISIMQGE 304


>gi|119775566|ref|YP_928306.1| flagellar motor protein MotB [Shewanella amazonensis SB2B]
 gi|119768066|gb|ABM00637.1| sodium-driven polar flagellar protein PomB [Shewanella amazonensis
           SB2B]
          Length = 312

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 112/327 (34%), Gaps = 36/327 (11%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   +  P     W   +AD M++LM FF+++   +  D    K I              
Sbjct: 3   KAKCNCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K  F  QN  E     K    I         +        ++  +  E  + +     +
Sbjct: 53  -KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPILDFQEGESE 111

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           S             G+    + +                   +  +   ++ +    KK+
Sbjct: 112 SAGGVQQQQGSQRGGEASSTAQE--------------TAESTQSDSSSSQELINQQVKKM 157

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+  + D     +  E+    I+I I ++     F   S    P    V++ +GE+L
Sbjct: 158 AEQLNEEIVDGA---IEIESLGQQIIIRIREK---GAFGSGSGFLQPRFRPVIRAVGELL 211

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
                +I++ G+TD     N     NW LS  RA S    L+K  G    R+  + G   
Sbjct: 212 KDVPGIITVSGYTDDMQISNELYSSNWDLSSKRAVSVAHELVKVKGFDSSRMK-VVGMGS 270

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
           +   + ++     + NRR++I +E  +
Sbjct: 271 NNPLVPNESAENRARNRRVEIAIEQGK 297


>gi|59711322|ref|YP_204098.1| flagellar motor protein MotB [Vibrio fischeri ES114]
 gi|197335182|ref|YP_002155478.1| flagellar motor protein [Vibrio fischeri MJ11]
 gi|59479423|gb|AAW85210.1| flagellar motor protein MotB1 [Vibrio fischeri ES114]
 gi|197316672|gb|ACH66119.1| flagellar motor protein [Vibrio fischeri MJ11]
          Length = 309

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 109/322 (33%), Gaps = 36/322 (11%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
             P     W   +AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 8   KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 56

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E     K    I +       +        ++     +  + +           
Sbjct: 57  GVQNVLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDIPQKTLDFHDGESDRAGGT 116

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                    G+    ST                 ++    +  + +  Q+L   I   L 
Sbjct: 117 KREAGKQTGGESPSNSTQ--------------TSAQSNSESESQTQSQQELEDTIKKALE 162

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             +++     +  E     ++I I ++     F   S+   P+   ++++I E++     
Sbjct: 163 REISEGA---IEVENLGQQLVIRIREK---GAFPAGSAFLQPKFRPLIRQIAELVKDVPG 216

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           +I + GHTD  P  +   R NW LS  RA S    + +  G   DR+ ++ G A     +
Sbjct: 217 IIRVSGHTDNQPLDSELYRSNWDLSAQRAVSVALEMERVKGFESDRL-RVRGMASTEPLV 275

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
           ++      + NRR++I +   +
Sbjct: 276 SNKTAEGRARNRRVEISIMQGK 297


>gi|254699266|ref|ZP_05161094.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
 gi|261749708|ref|ZP_05993417.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
 gi|261739461|gb|EEY27387.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
          Length = 345

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/351 (21%), Positives = 139/351 (39%), Gaps = 24/351 (6%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           + +   + II+++    D   ++ G WKI YADFMT + ++F         +        
Sbjct: 4   EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMASYF---------NPVKLMDRH 54

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-----------VDLKI 115
                         K  F+     E S++   D ++     +              +L  
Sbjct: 55  SSPKGVENVDQRDGKVRFESDQQVESSTKVVNDTTVRPASDQEERQLFREPYAMLAELAH 114

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            +   + Q  + +       ++  ++  +      S          DL     +      
Sbjct: 115 ETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQTVPQTA 174

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILISIIDQ 231
           P    +   A  +++ + DL K  +   +              V       G++I + D+
Sbjct: 175 PLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMIQLTDK 234

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +  MF   S+ P    + +L++I +V+A     + I GHTDA PF++   DNWRLS  R
Sbjct: 235 VDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNWRLSSAR 294

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           A  AY +L++ G+ E R+ ++ G+A  + K  +DP  + NRRIDI ++ + 
Sbjct: 295 AQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFIKSKP 345


>gi|2130949|dbj|BAA20285.1| PomB [Vibrio alginolyticus]
          Length = 315

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                             K T  +      +N        ++  + +  + ++ L + I 
Sbjct: 115 AGGTKRDEG---------KLTGGQSPATSTQNNESAEADMQQQQSKEMSQEMETLMESIK 165

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 279 EPLLPNDSDDNRALNRRVEISIMQGE 304


>gi|269965067|ref|ZP_06179232.1| flagellar motor protein [Vibrio alginolyticus 40B]
 gi|269830370|gb|EEZ84595.1| flagellar motor protein [Vibrio alginolyticus 40B]
          Length = 315

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                             K T  +      +N        ++  + +  + ++ L + I 
Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQNNESAEADMQQQQSKEMSQEMETLMESIK 165

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 279 EPLLPNDSDDNRALNRRVEISIMQGE 304


>gi|308048595|ref|YP_003912161.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307630785|gb|ADN75087.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 314

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/329 (20%), Positives = 118/329 (35%), Gaps = 36/329 (10%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K A         +W   +AD  T+LM FF+++   +  D    K I            
Sbjct: 7   KRKQA-----AGAPAWMATFADLATLLMCFFVLLLAFSEMDVLKFKQIAGSM-------- 53

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
              K  F  QN  E     +    I +       D       Q++  +   + + Y    
Sbjct: 54  ---KYAFGVQNKVEVKDIPRGTSVIAQEFRPGRPDPTPIEVIQQQTVEFTRDMLNYQPGE 110

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                 + + + +S  G     +          +         +   +      + +L K
Sbjct: 111 SDQAGGQQNQSGNSRGGTSSQTA---------NQPRAEQSNQSQTRTSASDADNVNELTK 161

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI+  L   + D     +  E+    I+I I ++     F   S+   P    V+  +G 
Sbjct: 162 KIAQQLEDQILDGA---IEVESLGQQIIIRIREK---GAFPAGSAFLQPRFRPVIHAVGN 215

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315
           +L     +IS+ GHTD +   N   R NW LS  RA S    L+K  G    R+ ++ G 
Sbjct: 216 LLKDVPGIISVTGHTDNTTIDNELYRSNWELSTQRAVSVAHELVKVEGFDPGRM-ELRGV 274

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A +   +++D       NRR++I +   +
Sbjct: 275 AENEPLVSNDTWEGRVRNRRVEITINQGK 303


>gi|222112258|ref|YP_002554522.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
 gi|221731702|gb|ACM34522.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
          Length = 313

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+       P + G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   EKKLQPIIIKRAKKRPHAP-HGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+   K  M    G  +  +                 ++K    ++  +++         
Sbjct: 62  FSSPLKVAMQGGDGAGNSSSVIPGG---------GNDLSKVHGQVRRSNSDSSTN----- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   +++   +  L  +    +  
Sbjct: 108 ---------------------------MRSSVEASRAERARQDAQRIKALQTKIEAMITE 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I   L                T  G+ I I+D +N PMFD  S++  P  
Sbjct: 141 NPRLNEYRSQIRLDL----------------TPDGLQIQIVDDQNRPMFDSGSALVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L +IG  L      IS+ GHTDA P+ N      NW LS DRA ++ + L+ +G+ +
Sbjct: 185 RDILHQIGAALGGVENRISLSGHTDAVPYGNGDRGYSNWELSADRANASRRELVAAGMPD 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A   L    +P  + NRRI I V   +
Sbjct: 245 AKLGRVVGMAASDLLEPQNPRAAVNRRITITVLTHE 280


>gi|91776291|ref|YP_546047.1| flagellar motor protein MotB [Methylobacillus flagellatus KT]
 gi|91710278|gb|ABE50206.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 308

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 62/335 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +   I+ K++      ++ G+WKI YADF+T +MAFFL+MW++ +T     + I +YF 
Sbjct: 3   KENVRIVVKRINKHAGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTKADLQGISEYFK 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  M    G           + + +       +TK    ++       ++   L+  
Sbjct: 63  TPLKVAMQGGSGA---------GASDSVLKGGGNDMTKKQGQIRRAEDIDARKKPDLKTA 113

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              ++                                                      +
Sbjct: 114 QEEVA--------------------------------------------------KAELE 123

Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +L++L ++I   + +        K +L + T  G+ I I+D++N PMF  S +   P   
Sbjct: 124 KLKELKRRIEEAIDASETLRQFKKQLLLDITTEGLRIQIVDEQNRPMFASSKAELQPYAR 183

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L +IG++L      IS+ GHTDA+P+ +      NW LS DRA ++ + L+  G+ E+
Sbjct: 184 QILHEIGQLLNDVPNKISLSGHTDAAPYPSGERYYSNWELSSDRANASRRELVSGGMKEE 243

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G +   L    +P+N  NRRI I++ +++
Sbjct: 244 KLLRVVGLSSAVLFDKDNPLNPINRRISIIIMNKK 278


>gi|237731926|ref|ZP_04562407.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
 gi|226907465|gb|EEH93383.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
          Length = 309

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/333 (24%), Positives = 126/333 (37%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              I++K++   +      GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIIVVKRRKHKNHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + Q+P      +      + +   N  DL+                 
Sbjct: 66  PLATAVTGGNRISNSQSPIPGGGDDYTQQQGEVNKQPNIDDLR----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLSKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L                   G+ I IID +N PMF   S+   P    +
Sbjct: 133 LRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+ + ++
Sbjct: 177 LRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPEDAINRRISLLVLNKQ 269


>gi|4322001|gb|AAD15905.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
          Length = 315

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 115/326 (35%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G+    ST   +S            ++  +   + K+  Q++   + 
Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQS------------AESDMQQQQSKEMSQEMETLME 162

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S    L  +     +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 163 SIKKALEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 279 EPLVPNDSDENRALNRRVEISIMQGE 304


>gi|258621630|ref|ZP_05716662.1| flagellar motor protein [Vibrio mimicus VM573]
 gi|262165143|ref|ZP_06032880.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
 gi|258586102|gb|EEW10819.1| flagellar motor protein [Vibrio mimicus VM573]
 gi|262024859|gb|EEY43527.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
          Length = 319

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 114/324 (35%), Gaps = 31/324 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLDFQEGDSDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                  +          K T  + + +  ++        ++  A    ++++ +A+ I 
Sbjct: 114 AGGNQRDSG---------KLTGGQSAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS  +       +  E     I I I ++     F + S+   P+   ++++I +++ 
Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + + GHTD     +   R NW LS  RA S  Q + K  G    R+ ++ G A  
Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADT 277

Query: 319 RLKIASDPM--NSANRRIDILVED 340
           +    +D     + NRR++I +  
Sbjct: 278 QPIGPNDTEAQRALNRRVEISILQ 301


>gi|157145319|ref|YP_001452639.1| flagellar motor protein MotB [Citrobacter koseri ATCC BAA-895]
 gi|157082524|gb|ABV12202.1| hypothetical protein CKO_01059 [Citrobacter koseri ATCC BAA-895]
          Length = 308

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 79/336 (23%), Positives = 126/336 (37%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQPHPIIVVKRRKHKGHGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P     ++      + +   N  +LK              
Sbjct: 62  FRTPLATAITGGHRIANSESPIPGGGEDYTQQQGEVNKQPNIDELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLSKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L                   G+ I IID +N PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + L+  G+ +
Sbjct: 173 RDILRGIAPVLNGIPNRISLSGHTDDFPYASGERGYSNWELSADRANASRRELVVGGLDD 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 268


>gi|160896052|ref|YP_001561634.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|160361636|gb|ABX33249.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 345

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+       P + G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   EKKLQPIIIKRVKKTAHAP-HGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+   K  M    G  +  +                                        
Sbjct: 62  FSSPLKVAMAGGDGAGNSSSVIPGGG---------------------------------- 87

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  N     H +   +  ++                + ++  +  L  +    +  
Sbjct: 88  -------NDLAKVHGQVRRSEAADSSNRRTSVDAGRADQAQVDSNRIKALKAKVDAMITS 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I + +                T  G+ I I+D++N PMFD  S++  P  
Sbjct: 141 NARLNEFRSQIRTDV----------------TPDGLQIQIVDEQNRPMFDSGSAMVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+++G  LA +   IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+  
Sbjct: 185 RDILREVGAALAGAENRISLSGHTDAAPYGNADRGYSNWELSSDRANASRRELVAAGMPL 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++I+G A   L +  DP    NRRI I V  ++
Sbjct: 245 NQLARITGLASSDLLLPDDPRAPQNRRITITVLTQE 280


>gi|120613045|ref|YP_972723.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120591509|gb|ABM34949.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 312

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 62/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  M         Q      + + I       ++K    ++   ++     +   
Sbjct: 62  FASPLKVAM---------QGGDGSGNSSSIIPGGGNDLSKVHGQVRRSDSDTATSRRTNI 112

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            N                                                      A + 
Sbjct: 113 EN-------------------------------------------------ARAEQARQD 123

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + R++ L  KI + +            +  + T  G+ I I+D +N PMFD  S++  P 
Sbjct: 124 QMRIKALQAKIDALISENPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 183

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+ 
Sbjct: 184 MRDILREIGSALGGVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 243

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ ++ G A   L    +P    NRRI I +  ++
Sbjct: 244 DAKLGRVVGLAASDLLEPDNPRAPVNRRITITILTKE 280


>gi|258624381|ref|ZP_05719329.1| flagellar motor protein [Vibrio mimicus VM603]
 gi|258583343|gb|EEW08144.1| flagellar motor protein [Vibrio mimicus VM603]
          Length = 319

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 114/324 (35%), Gaps = 31/324 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLDFQEGDSDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                  +          K T  + + +  ++        ++  A    ++++ +A+ I 
Sbjct: 114 AGGNQRDSG---------KLTGGQSAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS  +       +  E     I I I ++     F + S+   P+   ++++I +++ 
Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + + GHTD     +   R NW LS  RA S  Q + K  G    R+ ++ G A  
Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADT 277

Query: 319 RLKIASDPM--NSANRRIDILVED 340
           +    +D     + NRR++I +  
Sbjct: 278 QPLGPNDTEAQRALNRRVEISILQ 301


>gi|323495111|ref|ZP_08100198.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
 gi|323310662|gb|EGA63839.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
          Length = 314

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 112/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   NDCKCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G+    ST   ++              E+  + +  + L+ L + I 
Sbjct: 114 AGGTQRDKGSLTGGQSPDTSTQNNQNSES---------DNEQQQSAEMSQELETLMESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I I I ++     F + S+   P+   ++++I +++ 
Sbjct: 165 KALEREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               V+ + GHTD     +   R NW LS  RA S  Q + K  G + +R+ ++ G A  
Sbjct: 219 DIPGVVRVSGHTDNQRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERL-RVRGMADT 277

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
                +D     S NRR++I +   +
Sbjct: 278 EPLGPNDTEAQRSRNRRVEISIMQGE 303


>gi|156973487|ref|YP_001444394.1| flagellar motor protein MotB [Vibrio harveyi ATCC BAA-1116]
 gi|156525081|gb|ABU70167.1| hypothetical protein VIBHAR_01177 [Vibrio harveyi ATCC BAA-1116]
          Length = 314

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                         +D  K T  +       N        ++  + +  + ++ L + I 
Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTHNNQSAESDMQQQQSEQTSQEMETLMESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
                +D     + NRR++I +   +
Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303


>gi|37679056|ref|NP_933665.1| flagellar motor protein MotB [Vibrio vulnificus YJ016]
 gi|326423687|ref|NP_759314.2| flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
 gi|37197798|dbj|BAC93636.1| flagellar motor protein [Vibrio vulnificus YJ016]
 gi|319999044|gb|AAO08841.2| Flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
          Length = 318

 Score =  182 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 114/325 (35%), Gaps = 31/325 (9%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             D  P  L  W   +AD M++LM FF+++   +  D    K I               K
Sbjct: 7   KCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 55

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I +       +        ++     +  + +        
Sbjct: 56  FAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRA 115

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                        +D  K T  +      +        +++  +    K ++ L + I  
Sbjct: 116 GG---------TQRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKK 166

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L   +       +  E     I+I + ++     F + S+   P+   ++++I E++  
Sbjct: 167 ALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVKD 220

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A   
Sbjct: 221 VPGIVRISGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRL-RVRGMADTD 279

Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342
             + +D     + NRR++I +   +
Sbjct: 280 PLVDNDTEENRARNRRVEISIMQGE 304


>gi|153835783|ref|ZP_01988450.1| PomB [Vibrio harveyi HY01]
 gi|148867501|gb|EDL66863.1| PomB [Vibrio harveyi HY01]
          Length = 314

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGVSDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                         +D  K T  +       N        ++  + +  + ++ L + I 
Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTHNNQSAESDMQQQQSEQTSQEMETLMESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
                +D     + NRR++I +   +
Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303


>gi|269962340|ref|ZP_06176690.1| flagellar motor protein [Vibrio harveyi 1DA3]
 gi|269832836|gb|EEZ86945.1| flagellar motor protein [Vibrio harveyi 1DA3]
          Length = 314

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   NKCDCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                         +D  K T  +      +N        ++  + +  + +  L + I 
Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTQNNQSAESDMQQQQSEQTSQEMDTLMESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
                +D     + NRR++I +   +
Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303


>gi|209694505|ref|YP_002262433.1| flagellar motor protein MotB [Aliivibrio salmonicida LFI1238]
 gi|208008456|emb|CAQ78622.1| sodium-driven polar flagellar protein MotB [Aliivibrio salmonicida
           LFI1238]
          Length = 309

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 114/322 (35%), Gaps = 36/322 (11%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
             P     W  ++AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 8   KCPPGSPIWMAIFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 56

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E     K    I +       +        ++     +  + +           
Sbjct: 57  GVQNVLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDIPQKTLDFHDGESDRAGGS 116

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                +   G+    ST                 ++    +  + +  Q+L + I   L 
Sbjct: 117 KREAGNLTGGESSSTSTQTN--------------AQSDAESQSQNQSQQELEETIKKALE 162

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             +A+     V  E     ++I I ++     F   S+   P+   ++++IGE++     
Sbjct: 163 REIAEGA---VEVENLGQQLVIRIREK---GAFPAGSAFLQPKFRPLIRQIGELVKDVPG 216

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSA-YQVLMKSGVSEDRISKISGFAHHRLKI 322
           +I + GHTD  P  +   R NW LS  RA S  +++L   G + DR+ ++ G A      
Sbjct: 217 IIRVSGHTDNQPLESELYRSNWDLSAQRAVSVGHEMLRVKGFNSDRL-RVRGMASTEPLG 275

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            +      + NRR++I +   +
Sbjct: 276 PNKTAAQRARNRRVEISIMQGK 297


>gi|237653884|ref|YP_002890198.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|237625131|gb|ACR01821.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 330

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 135/336 (40%), Gaps = 52/336 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q I++K+        +  G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DDTQQPIVVKRIKKGGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTAQGDLEGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  M   +G  D  +  +            E +++    ++ G T   +      
Sbjct: 62  FQNPLKLAMQGGEGTGDSSSIIKGG---------GEDLSRKVGQVRRGDTPSTRAINLDA 112

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                 S                                           + + I   + 
Sbjct: 113 APARVKSE---------------------------------------AEATAQAIAERRE 133

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +            +L +    G+ I ++D +N PMF  +S+   P 
Sbjct: 134 RARLIDLKGKLEAVIEANPSLRQFKNQLLIDIVSEGLRIQLVDAQNRPMFTSASAELRPY 193

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
           T  +L++I   L      +S+ GHTD++ +        NW LS +RA +A + L+  G+ 
Sbjct: 194 TRELLREIAAALNDVDNRVSMSGHTDSAQYAGGERGFSNWELSSNRANAARRELVAGGLE 253

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
             ++ ++ G A        DP++ ANRRI I+V +R
Sbjct: 254 AGKMLRVVGLADTAHLNPGDPLDPANRRISIVVLNR 289


>gi|326319083|ref|YP_004236755.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375919|gb|ADX48188.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 312

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 133/337 (39%), Gaps = 62/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  M         Q      + + I       ++K    ++   ++     +   
Sbjct: 62  FASPLKVAM---------QGGDGSGNSSSIIPGGGNDLSKVHGQVRRSDSDTATSRRTNI 112

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            N                                                      A + 
Sbjct: 113 EN-------------------------------------------------ARAEQARQD 123

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + R++ L  KI + +            +  + T  G+ I I+D +N PMFD  S++  P 
Sbjct: 124 QMRIKALQAKIDALISENPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 183

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+ 
Sbjct: 184 MRDILREIGAALGGVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 243

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ ++ G A   L    +P    NRRI I V  ++
Sbjct: 244 DAKLGRVVGLAASDLLEPENPRAPVNRRITITVLTKE 280


>gi|152985187|ref|YP_001351001.1| flagellar motor protein MotB [Pseudomonas aeruginosa PA7]
 gi|150960345|gb|ABR82370.1| chemotaxis protein MotB [Pseudomonas aeruginosa PA7]
          Length = 342

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 55/334 (16%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N+Q II+K+        ++ GSWKI +ADF T +MAFFLV+W++++   + KKAI  YF
Sbjct: 2   DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   +AS  + D                     T      K  +   + Q    E+
Sbjct: 61  QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I    + Q                                        ++     ++R+
Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAESLAEQVERE 127

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L +  +      +  +    + FE TR G+ I I+D  N PMFD  S+   P   
Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + E +      ISI GHTDA P+       NW LS +RA +A + L+  G  E +
Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPETQ 247

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           IS++ G+A  RL    DP+N  NRRIDI+V  R+
Sbjct: 248 ISQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281


>gi|312884943|ref|ZP_07744633.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367420|gb|EFP94982.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 328

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 109/321 (33%), Gaps = 19/321 (5%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L  W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 10  PPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         +        ++     +  + +            
Sbjct: 59  VQNRLEVKDIPKGTSVIAMEFRPGRPEPTPIDVIMQQTIDITQQTVEFHEGESDRAGGMQ 118

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                   G+    ST+  +  + +         +E     ++ +  + L     +    
Sbjct: 119 RDQGKETGGQSTETSTETSQEADSQSQEEQQQQQQESQEQQQQSESSEQLETVAENIKQA 178

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  E     I I I   R    F + S+   P+   ++++I E++     V
Sbjct: 179 LEREIEQGAMEVENLGQQIDIRI---RERGAFPEGSAFLQPKFRPLVRQIAELVKDIPGV 235

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           + + GHTD  P  +   R NW LS  RA S  Q + K  G   DR+ ++ G A       
Sbjct: 236 VRVSGHTDNQPIDSELYRSNWDLSAQRAVSVAQEMEKVRGFKHDRL-RVRGMADTEPLGP 294

Query: 324 SDPM--NSANRRIDILVEDRQ 342
           +      + NRR++I +   +
Sbjct: 295 NKTEAQRALNRRVEISIMQGK 315


>gi|269103244|ref|ZP_06155941.1| Flagellar motor rotation protein MotB [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163142|gb|EEZ41638.1| Flagellar motor rotation protein MotB [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 314

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 107/318 (33%), Gaps = 39/318 (12%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
              +W   +AD  T+LM FF+++   +  D    K I               K  F  QN
Sbjct: 11  GAPAWMATFADLATLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------KNAFGVQN 59

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
             + +   K    I +       +        ++     +  + +               
Sbjct: 60  LLDINDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHEGESDKAGGTERSA 119

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                G                        ++++         L+ L K ++  +   + 
Sbjct: 120 GTLTGG-----------------QADKKNKTQQQDQDQNASDSLKQLEKVLNKAIEREIE 162

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
           +     V  E     ++I I +Q     F + S+   P+   +++++  ++      + I
Sbjct: 163 EG---NVEIENFGQQLVIRIKEQ---GAFPEGSAFLQPKFRPLVRQVASLVKDVPGTVRI 216

Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326
            GHTD  P  +   R NW +S  RA S  Q + K +G  + R+ ++ G A      ++D 
Sbjct: 217 SGHTDDRPVESELYRSNWDISAQRAVSVAQEMAKVTGFDQHRM-QVVGLADTAPIASNDT 275

Query: 327 MNS--ANRRIDILVEDRQ 342
                 NRR++I +   +
Sbjct: 276 AEGRKRNRRVEISIMQGK 293


>gi|54307286|ref|YP_128306.1| chemotaxis LafU protein [Photobacterium profundum SS9]
 gi|46911706|emb|CAG18504.1| Hypothetical chemotaxis LafU protein [Photobacterium profundum SS9]
          Length = 330

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 121/332 (36%), Gaps = 47/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
               II+KK+       ++ G+WK+ +ADF   +MAFF+V+W++  T  + +  IEQ   
Sbjct: 4   EPHIIIVKKRARRHHDEHHGGAWKVAFADFAIAMMAFFMVLWLMGITTQEERIEIEQRLQ 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                       IF+  N P     +      +  I  ++   +   T+  +Q  + ++ 
Sbjct: 64  TASIFD-----NIFEITNSPHPIDFDGNASPFENPINSSTNSKRKRDTSVAQQTPQGDDK 118

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P L+           
Sbjct: 119 AS---------------------------------------AGRGPKLNSMLAGKHLSTA 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK +      L A N    ++ E    G+ I I D  +  MF +      P    
Sbjct: 140 QLTILAKGLKEMAEALSASN---NIVLEIVPQGLRILIQDDDDHFMFQRGGIEMTPFFED 196

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +  VL      + I GHTD+ PF      NW LS  RA  A QVL+ SG+    I 
Sbjct: 197 MLYNLAPVLGQIKNRMVISGHTDSIPFHRRDYSNWDLSGSRALKARQVLVDSGLPVANIL 256

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++  A         P +  NRRI+++V  + 
Sbjct: 257 QVAAMAARMPVNKQYPKSGKNRRIEMMVLTKN 288


>gi|78063638|ref|YP_373546.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77971523|gb|ABB12902.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 318

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 127/328 (38%), Gaps = 64/328 (19%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           +++++K   D   ++ G+WKI YADF+T +MAFFL+MW++ +     K+ IE YFN    
Sbjct: 18  VVVRRKKGEDHDAHHGGAWKIAYADFVTAMMAFFLLMWLLGSVSKYDKQGIEDYFNTPLS 77

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L++                         +        ++ G  +       ++     +
Sbjct: 78  TLLSGG----------------------QDAQAPRPSVVQGGGRDMSDPTPAIDTKAQPV 115

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             S  +       T+                         L  L  +   A+ +   L+ 
Sbjct: 116 PASSPAALAGIVDTQ------------------------KLERLKAKLTAAIAQSPSLRA 151

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +I   ++                  G+ I I+D    PMF   SS P      +L +
Sbjct: 152 YQDQIRIAITNE----------------GLRIEIVDSLKRPMFASGSSQPESYATAILSQ 195

Query: 255 IGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           IG  L      +SI GHTD++P+   +    NW LS DRA +A + L+  G+ ED++ ++
Sbjct: 196 IGTALDDVENRVSIAGHTDSTPYPDGSTGYSNWELSSDRANAARRALVAGGLREDKLLQV 255

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVED 340
            G A       +      NRRI ILV +
Sbjct: 256 RGLADVLPLDKNVADEPTNRRISILVMN 283


>gi|295699068|ref|YP_003606961.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295438281|gb|ADG17450.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 344

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/346 (22%), Positives = 132/346 (38%), Gaps = 65/346 (18%)

Query: 1   MNSHGDK--NQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
           M     +    E    +I+++ +   +   ++ G+WKI YADF+T +MAFFL+MW++ +T
Sbjct: 1   MRERRSRAAQVEAPAPVIVRRSRKGDEHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGST 60

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
               K+ IE YFN    +L+  ++G    +    +     I  +     TK+  +     
Sbjct: 61  SKYDKQGIEDYFNTPLSSLLGGNEGTAAARPSVVQGGGRDISDTRPGVGTKSQTEPTP-- 118

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                                                           ++   +   L  
Sbjct: 119 ------------------------------------------PRAAMPAVTPMDAKRLQQ 136

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L  +    +++   L     +I                    T  G+ I I+D +N PMF
Sbjct: 137 LKAKLSALIEQSSVLNAFKDQIR----------------ISITNEGLRIEIVDSQNRPMF 180

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSA 295
              SS   P  + +L +IG  L      ISI GHTDA P+        NW LS +RA +A
Sbjct: 181 ASGSSKLQPYAVTILTQIGAALNDVDNRISIAGHTDAVPYTAGPEGYSNWELSSERANAA 240

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            + L+  G+  D++ ++ G A      +       NRRI ILV ++
Sbjct: 241 RRALVAGGMHGDKLLQMRGLADVLPLNSHVADEPTNRRISILVLNK 286


>gi|171057687|ref|YP_001790036.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170775132|gb|ACB33271.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 320

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 63/337 (18%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T +  K     
Sbjct: 4   DAKKLQPIIIKRVKKGGH-SAHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDK----- 57

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
                        KGI D    P + + +    + D           +  T+ + +   +
Sbjct: 58  -------------KGIQDFFQSPLKVAMSGGAGAGDATSVIKGGGTDLSQTSGQVKRGEV 104

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +   Y +                                           + +      
Sbjct: 105 PSKKTYNAE------------------------------------------AIKTSQRKA 122

Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            ++RL+ L +++   ++           +  + TR G+ I I+D++N PMFD  +S   P
Sbjct: 123 EQERLETLRQRVQDVMANSPKLAEFKNQIRLDMTRDGLRIQIVDEQNRPMFDSGASEVKP 182

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVS 305
               +L+ IG VL      +++ GHTDA P        NW LS DRA ++ + L+  G+ 
Sbjct: 183 YMREILRAIGSVLTEVPNRLTLEGHTDAKPMGSGAGYSNWELSSDRANASRRELLAGGLD 242

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + R+ ++ G A        DP+N  NRRI I+V  R+
Sbjct: 243 DARVLRVQGLAASVPFDQQDPLNPINRRISIIVMTRE 279


>gi|254228602|ref|ZP_04922026.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262395023|ref|YP_003286877.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
 gi|151938781|gb|EDN57615.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262338617|gb|ACY52412.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
          Length = 315

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                             K T  +      +N        ++  + +  + ++ L + I 
Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQNNQSAEADMQQQQSEEMSQEMETLMESIK 165

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 279 EPLLPNDSDENRALNRRVEISIMQGE 304


>gi|124268058|ref|YP_001022062.1| chemotaxis signal transduction protein CheY [Methylibium
           petroleiphilum PM1]
 gi|124260833|gb|ABM95827.1| Chemotaxis signal transduction protein CheY [Methylibium
           petroleiphilum PM1]
          Length = 320

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 60/338 (17%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q II+KK         + G+WKI YADF+T +MAFFL+MW++ +T +  +K I+ 
Sbjct: 4   DAKKLQPIIVKKIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDRKGIQD 62

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YFN   K  M    G  D  +  +            + +T+++  +K G    +++   L
Sbjct: 63  YFNNPIKVSMMGGSGSGDSSSVVKGG---------GQDLTRSTGQVKRGDVEAERKSYTL 113

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
           +                                                  +     A  
Sbjct: 114 Q-----------------------------------------------ALKATRAQQASA 126

Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             + L+ L  ++ S L+     + +   + F+ T  G+ I I+D++N PMF   S++  P
Sbjct: 127 EAESLKMLKGRVESKLANDPRFNELKAQIRFDMTADGLRIQIVDEQNRPMFATGSAVVQP 186

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304
               +L+ IG VLA     +++ GHTD + F   A    NW LS DRA ++ + L+  G+
Sbjct: 187 YMRELLRTIGGVLAEVPNKLTLEGHTDTAAFSAGAGGYSNWELSADRANASRRELIAGGL 246

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ ++ G A   L     P+N  NRRI I+V +R+
Sbjct: 247 ADEKVLRVQGLAASSLFDREQPLNPVNRRISIIVMNRE 284


>gi|85710173|ref|ZP_01041238.1| flagellar motor component [Erythrobacter sp. NAP1]
 gi|85688883|gb|EAQ28887.1| flagellar motor component [Erythrobacter sp. NAP1]
          Length = 319

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 58/332 (17%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              II+KK        ++ G+WK+ YADF+T +MAFFL++W++ AT+++ ++ I  YF P
Sbjct: 10  PAPIIVKKVTIAQGDGHHGGAWKVAYADFVTAMMAFFLLLWLLGATEENQRRGIADYFAP 69

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   S G          +  +    +  +  T +    +                 
Sbjct: 70  TLVKTRQQSAGADGMLGGSSLTDVDNYPNAQGQTGTLSITVPRG---------------- 113

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                  E   L  L ++   A+ ++++
Sbjct: 114 -------------------------AEGGPMEGGGDGDIETERLDRLREQIDEALAQRRQ 148

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +  LA                + V       GI I ++D  +  MF   ++I   +   +
Sbjct: 149 ISHLA----------------RQVKVMRAPDGIRIDLVDDADFSMFALGTTILTQDARGL 192

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L+ IGEVL      + +RGHTD+ P+R  I  +NW LS  RA +  Q L+ SG+  +R +
Sbjct: 193 LEVIGEVLEAQRTPLILRGHTDSLPWRDGITANNWSLSAGRAEATRQALIASGLEANRFA 252

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +I G A     IA +P +  NRRI +L+ ++Q
Sbjct: 253 RIEGVADTEPLIADNPADPRNRRISLLLLEQQ 284


>gi|300312289|ref|YP_003776381.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
 gi|300075074|gb|ADJ64473.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
          Length = 312

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 138/337 (40%), Gaps = 63/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            E  + II+K+        +  G+WKI YADF+T +MAFFL+MW++ +T       I +Y
Sbjct: 3   DEGLRPIIVKRIKKGGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLNGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  M    G  D                  + +T+    L+ G T+   + Q L 
Sbjct: 62  FKTPLKVAMAGGSGSGDANTVLPGG---------GKDLTRQDGQLRKGETDVTARKQNL- 111

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                               ++ L    
Sbjct: 112 -------------------------------------------------KQAQQELEKME 122

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL++L  ++   + S          +L + T  G+ I I+D++N PMF  +S+   P 
Sbjct: 123 RTRLEELKSRLEKAIDSNPTLKQFKNQLLIDITSEGLRIQIVDEKNRPMFALASAQLQPY 182

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
           T  +L +IG  L      IS+ GHTDA+P+        NW LS DRA ++ + L+  G+ 
Sbjct: 183 TKEILHEIGRTLNDVPNKISLSGHTDATPYSKGEKGYSNWELSADRANASRRELIIGGMD 242

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G +   L    DP N  NRRI I+V +++
Sbjct: 243 ESKVLRVVGLSSAVLLDKEDPFNPINRRISIIVMNKK 279


>gi|162147455|ref|YP_001601916.1| chemotaxis protein motB (motility protein B) [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545564|ref|YP_002277793.1| OmpA/MotB domain-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786032|emb|CAP55614.1| putative chemotaxis protein motB (Motility protein B)
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533241|gb|ACI53178.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 368

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 15/340 (4%)

Query: 7   KNQENDQFIIIKKK--VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
           KN    Q I+I++      ++  ++ G+WKI YADFMT +M+FFLVMW++NAT D+ ++ 
Sbjct: 3   KNDNKQQPILIRRSDGEDSEEGGHSGGAWKIAYADFMTAMMSFFLVMWLLNATTDEQRRG 62

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           I Q+FNP       A          P           I    T + V           + 
Sbjct: 63  IAQFFNPMADRDTHAQPTDSMLDVQPSPLWGGSAIRRIKNGDTLDPVQDGAPGARNAPRT 122

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            R + +   ++   ++    +        G     +  +               +  + +
Sbjct: 123 VRQDRSSDDITLGLRTRLNPSPPAIVPIGGPQTGAARSVGYIGAGSPAEASAEEAAVEQM 182

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A   ++ +QD               +    V  +  R  I I + D  NTPMFD  S+ P
Sbjct: 183 ASGLRQAIQD----------NPEIRDAASDVSIQIGRDDIRIELRDSNNTPMFDSGSATP 232

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMK 301
                 +L +I   LA   E ISI G+TD +P+    +    NW LS+ RA  A + L++
Sbjct: 233 NRLGKQMLAQIAAWLAPMPEPISIVGYTDGAPYHVGRQWGMSNWTLSVMRADHARETLVQ 292

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +G  +  I  +SG +   L + SDP  + NRR+ +++  R
Sbjct: 293 AGYPDRNILDVSGRSDRDLALPSDPSGAGNRRVVLIMHRR 332


>gi|85711188|ref|ZP_01042248.1| flagellar motor protein [Idiomarina baltica OS145]
 gi|85695101|gb|EAQ33039.1| flagellar motor protein [Idiomarina baltica OS145]
          Length = 309

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 104/321 (32%), Gaps = 39/321 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L  W   +AD MT+LM FF+++   +  D    K I               K    
Sbjct: 13  PPPGLPMWMATFADLMTLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KYALG 61

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I +       +     T Q++  +  +  + +          K 
Sbjct: 62  VQNKIEVKDIPKGTSIIAQEFRPGRPEPTPIETIQQQTVEMTQQTLEFQDGESDFAGGKQ 121

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                                    +        K    +       Q + + +      
Sbjct: 122 VERGG--------------------QQADSEEDKKAVDGSESDPAVEQQVKELMERIREQ 161

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  E     I+I I +      F + S+   P+   V++++ + L      
Sbjct: 162 LSDNIKAGSLELEQLGQQIIIRIKEN---GSFPEGSAFLQPQFKPVIREVAQALKDIPGE 218

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           I+I GHTD  P  +      W LS  RA +  + +    G  + R+  + G+A  +  + 
Sbjct: 219 ITISGHTDNQPLVSEMYTSKWDLSAKRAVAVAEEMTSVDGFDQSRLVTM-GYADTKPIVP 277

Query: 324 SD--PMNSANRRIDILVEDRQ 342
           ++     + NRR+DI +   +
Sbjct: 278 NNSTSNRALNRRVDIAIMQGK 298


>gi|326386939|ref|ZP_08208553.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208619|gb|EGD59422.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
          Length = 277

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 76/326 (23%), Positives = 129/326 (39%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           II KK+ +    ++ G+WK+ YADF+T +MAFFL+MW++ AT +  +K I  YF P    
Sbjct: 13  IIVKKITVVAAGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTERQRKGIADYFTPTLVK 72

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
               S G +        +  +       +  TK     +  +   K              
Sbjct: 73  TRQGSAGSYGLLGGSSLTDADTYQFRAGQTGTKTLTIPRDATGGAKDGGS---------- 122

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                              +      L +     ++  ++L+ L
Sbjct: 123 -----------------------------------KAKRTAALQERLKQKLQASEQLRQL 147

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           AK                 V    T  GI + ++D  N  MF   ++I  P+ + +++ I
Sbjct: 148 AK----------------QVHLTMTPDGIRLDLLDDANFSMFRLGTTILTPQAVELIRAI 191

Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + +A     +++RGHTD+  ++     +NW LS  RA +  Q L++ GV E R  +I G
Sbjct: 192 AQSIAPDQNGLTVRGHTDSLQWKPGDPANNWSLSAGRAEATRQALLRFGVPEKRFRRIEG 251

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            A     I  +P +  NRR+ IL+ D
Sbjct: 252 VADQEPLITDNPADPRNRRMSILLMD 277


>gi|167626173|ref|YP_001676467.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167356195|gb|ABZ78808.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 336

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 126/331 (38%), Gaps = 44/331 (13%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++I++K        + G+WK+ +ADF   +MA F+V+WI+   D   +  I QY N
Sbjct: 4   RPEPVVIRRKKRSKAKAGHGGAWKVAFADFTLAMMALFMVLWIMQIADQQERTMIVQYLN 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
             G      S   F+    P                                        
Sbjct: 64  --GDLHDDGSINPFNLGGAPS--------------------------------------- 82

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +F    +   +           +         + +     +    P L+       + + 
Sbjct: 83  MFDFQGNIAIQQAVLPAAATGVERSGPAMHNRIPQGTENAKAGRGPELNSLVPGKFETQA 142

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ LAK+I   +  +    +   V  +    G+ I + D  N  MF + S+   P    
Sbjct: 143 QLEFLAKEIDKVIENVS---MSANVELQVVPQGVRILMHDNVNQFMFTRGSADMKPYFED 199

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +G +L+     I+I GHTD+SP+      NW LS  RA  A +VL   G+   ++ 
Sbjct: 200 LLMALGPLLSQVENKITISGHTDSSPYAGKKFTNWELSSKRALLARRVLEYGGLRRHQVI 259

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +++G A     +  DP  +ANRRI++LV   
Sbjct: 260 QVTGMADQAPYVIKDPAAAANRRIEVLVMTS 290


>gi|15600146|ref|NP_253640.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAO1]
 gi|107104052|ref|ZP_01367970.1| hypothetical protein PaerPA_01005125 [Pseudomonas aeruginosa PACS2]
 gi|116053102|ref|YP_793421.1| flagellar motor protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894048|ref|YP_002442917.1| flagellar motor protein MotB [Pseudomonas aeruginosa LESB58]
 gi|254238332|ref|ZP_04931655.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
 gi|254244159|ref|ZP_04937481.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
 gi|313109955|ref|ZP_07795882.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
 gi|9951234|gb|AAG08338.1|AE004908_4 chemotaxis protein MotB [Pseudomonas aeruginosa PAO1]
 gi|115588323|gb|ABJ14338.1| chemotaxis protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170263|gb|EAZ55774.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
 gi|126197537|gb|EAZ61600.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
 gi|218774276|emb|CAW30093.1| chemotaxis protein MotB [Pseudomonas aeruginosa LESB58]
 gi|310882384|gb|EFQ40978.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
          Length = 347

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 55/334 (16%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N+Q II+K+        ++ GSWKI +ADF T +MAFFLV+W++++   + KKAI  YF
Sbjct: 2   DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   +AS  + D                     T      K  +   + Q    E+
Sbjct: 61  QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I    + Q                                        ++     ++R+
Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAENLAEQVERE 127

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L +  +      +  +    + FE TR G+ I I+D  N PMFD  S+   P   
Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + E +      ISI GHTDA P+       NW LS +RA +A + L+  G  E +
Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQ 247

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I+++ G+A  RL    DP+N  NRRIDI+V  R+
Sbjct: 248 IAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281


>gi|163749515|ref|ZP_02156763.1| flagellar motor protein [Shewanella benthica KT99]
 gi|161330924|gb|EDQ01851.1| flagellar motor protein [Shewanella benthica KT99]
          Length = 304

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 117/313 (37%), Gaps = 24/313 (7%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I               K  F  QN  E  
Sbjct: 1   MATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------KYAFGVQNKVEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I         +        ++  +  E  + Y +    S         +   
Sbjct: 50  DIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPTLEYQAGDDDSSGGVQQQRGEQRG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G+    + +   +  K E+       +E       ++ + D  KK++  L+  + D    
Sbjct: 110 GEASATAQEQ--AEAKAESVSQARAEEESKAQAAAQENINDQVKKMAQELNKEIVDGA-- 165

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E+    I+I I ++     F   S    P    V++++GE+L     ++++ G TD
Sbjct: 166 -IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVGELLRDIPGIVTVSGFTD 221

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329
                N     NW LS  RA +    L+K  G  ++R+  + G A+    + +D     +
Sbjct: 222 DMNISNELYSSNWDLSSKRAVAVAHELIKVRGFDQNRMK-VVGMANTNPLVDNDSASNRA 280

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +E  +
Sbjct: 281 RNRRVEIAIEQGK 293


>gi|84394351|ref|ZP_00993072.1| flagellar motor protein [Vibrio splendidus 12B01]
 gi|84375010|gb|EAP91936.1| flagellar motor protein [Vibrio splendidus 12B01]
          Length = 315

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 111/321 (34%), Gaps = 31/321 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L  W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 10  PPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I +       +        ++     +  + +     +      
Sbjct: 59  VQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAGGTM 118

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                   GK    ST          +       +++  A  + + ++ L + I   L  
Sbjct: 119 RDQGKMTGGKSPEVSTH---------DNQNSESDQQQQQAEAQSQEMETLMESIKKALER 169

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            +       +  E     I+I I ++     F   S+   P+   +++++ E++     +
Sbjct: 170 EIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDVPGI 223

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           + I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A       
Sbjct: 224 VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEPVEP 282

Query: 324 SDPMNSA--NRRIDILVEDRQ 342
           +D       NRR++I +   +
Sbjct: 283 NDTEWQRSLNRRVEISIMQGE 303


>gi|91794978|ref|YP_564629.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91716980|gb|ABE56906.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 330

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 44/332 (13%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             ++ IIIK+      + ++ G+WK+ +ADF   +MA F+V+WI+   D D +  I QY 
Sbjct: 3   HKNEPIIIKRGRRSKRSASHGGAWKVAFADFTLAMMALFMVLWIMQIADQDERSQIVQYL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             NP + +  + I         + ++    GS  ++       N
Sbjct: 63  R--------GEMYASGAMNPFDVAQSSSIIDFEGSPAIQQAIITSAGSGPERAGPAMHNN 114

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                      +  + +     +                                    +
Sbjct: 115 IPAGEEEPNAGQGPEFNAMVPGQY---------------------------------DTQ 141

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L  LA++++  +       +   +       GI I I D  +  MF + S+       
Sbjct: 142 AQLVMLARQLNHVVQQSS---MADNIAVTLVPQGIRILIHDNIDRFMFTRGSAQMQVYFE 198

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  +G VL   T  + I GHTD++P+      NW LS  RA  A +VL   GV  +++
Sbjct: 199 DLLLALGPVLGQVTNAMVISGHTDSTPYVGTEFTNWELSSKRALLARRVLEFGGVKRNQV 258

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +++G A     I  +P  +ANRRI++L+   
Sbjct: 259 IQVTGMADQVAYIPQEPAAAANRRIEVLILTS 290


>gi|83648502|ref|YP_436937.1| flagellar motor protein MotB [Hahella chejuensis KCTC 2396]
 gi|83636545|gb|ABC32512.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
          Length = 326

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 69/321 (21%), Positives = 114/321 (35%), Gaps = 45/321 (14%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           + P  L +W   +AD M++LM FF+++   +  D    K +                  F
Sbjct: 10  ECPPGLPAWMATFADLMSLLMCFFVLLLSFSEMDALKFKRLAGSMREA-----------F 58

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             Q      S  K    I +  +    D     T  ++    L N              +
Sbjct: 59  GVQAIVNVDSIPKGTSIIAQEFSPGKPDPTPLQTIMQQTEMDLPNLEQLCEQQVADALQE 118

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                  E+  D+                    L K K+L  + +     LA  + S + 
Sbjct: 119 ECPKVQGEELSDIV-------------------LEKIKMLVEETENDAITLASALESEVR 159

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                     V  ET    I+I + ++     F   S+   PE   V+ K+ E+L     
Sbjct: 160 N-------NQVEVETRGRKIVIRVQEK---GSFSSGSADLNPEFYPVIDKLVELLKSMEG 209

Query: 265 VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            IS+ GH+D+ P R    R NW LS  RA      L +SG +   R   I+G+A  +   
Sbjct: 210 SISVEGHSDSIPIRTARFRSNWDLSAARALEVAHALFESGELEPSRF-SIAGYADTKPLA 268

Query: 323 ASDPM--NSANRRIDILVEDR 341
            +D     + NRR++I+++  
Sbjct: 269 PNDSAENRARNRRVEIILQQP 289


>gi|28897464|ref|NP_797069.1| flagellar motor protein MotB [Vibrio parahaemolyticus RIMD 2210633]
 gi|153840267|ref|ZP_01992934.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
 gi|260876424|ref|ZP_05888779.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
 gi|28805676|dbj|BAC58953.1| sodium-driven polar flagellar protein MotB [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149746069|gb|EDM57199.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
 gi|308092849|gb|EFO42544.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
 gi|328472526|gb|EGF43389.1| flagellar motor protein MotB [Vibrio parahaemolyticus 10329]
          Length = 315

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G+    ST   +S              ++  + +  + ++ L + I 
Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQS---------AESDMQQQQSEEMSQEMETLMESIK 165

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 279 EPLVPNDSDENRALNRRVEISIMQGE 304


>gi|148976605|ref|ZP_01813292.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
 gi|145963956|gb|EDK29214.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
          Length = 315

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 111/324 (34%), Gaps = 31/324 (9%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
               P  L  W   +AD M++LM FF+++   +  D    K I               K 
Sbjct: 7   CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  QN  E     K    I +       +        ++     +  + +     +   
Sbjct: 56  AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                      GK    ST          +       +++  A  + + ++ L + I   
Sbjct: 116 GTMRDQGKMTGGKSPEVSTH---------DNQNSESDQQQQQAEAQSQEMETLMESIKKA 166

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   +       +  E     I+I I ++     F   S+   P+   +++++ E++   
Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220

Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
             ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A    
Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279

Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342
              +D       NRR++I +   +
Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303


>gi|86147426|ref|ZP_01065738.1| flagellar motor protein [Vibrio sp. MED222]
 gi|85834719|gb|EAQ52865.1| flagellar motor protein [Vibrio sp. MED222]
          Length = 315

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 109/324 (33%), Gaps = 31/324 (9%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
               P  L  W   +AD M++LM FF+++   +  D    K I               K 
Sbjct: 7   CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  QN  E     K    I +       +        ++     +  + +     +   
Sbjct: 56  AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                      GK    S    ++   ++         ++         ++ L + I   
Sbjct: 116 GTMRDQGKMTGGKSAEVSAHNNQNSESDQQQQQAQEQSQE---------METLMESIKKA 166

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   +       +  E     I+I I ++     F   S+   P+   +++++ E++   
Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220

Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
             ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A    
Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279

Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342
              +D       NRR++I +   +
Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303


>gi|261252277|ref|ZP_05944850.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
           102891]
 gi|260935668|gb|EEX91657.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
           102891]
          Length = 313

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 112/321 (34%), Gaps = 31/321 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L  W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 9   PPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I +       +        ++     +  + +            
Sbjct: 58  VQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG-- 115

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                    +D  K T  +      +N        ++  + +  + L+ L + I   L  
Sbjct: 116 -------TQRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALER 168

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            +       +  E     I I I ++     F + S+   P+   ++++I +++      
Sbjct: 169 EIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDVPGR 222

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           I + GHTD     +   R NW LS  RA S  Q + K  G + +R+ ++ G A       
Sbjct: 223 IRVSGHTDNQRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERL-RVRGMADTEPLGP 281

Query: 324 SDPM--NSANRRIDILVEDRQ 342
           +D     S NRR++I +   +
Sbjct: 282 NDTEAQRSRNRRVEISIMQGE 302


>gi|152995178|ref|YP_001340013.1| flagellar motor protein MotB [Marinomonas sp. MWYL1]
 gi|150836102|gb|ABR70078.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 330

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 122/323 (37%), Gaps = 41/323 (12%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
              +    L ++   +AD M++LM FF+++      D    K +               K
Sbjct: 8   DCPECVEGLPAYMGTFADLMSLLMCFFVLLLSFAEMDVLKFKQLAGSL-----------K 56

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  Q   E  S       I +  +    +    +  ++K     EN +  +     +E
Sbjct: 57  VAFGVQREVEADSIPMGTSVIAQEFSPGRPEPTPINEVKQKADSTPENTLEVICKPGDAE 116

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             + S +        + K                   SK  +   K+ +  +  A+ I+S
Sbjct: 117 LKEQSNSGSPAPVTFVDK-------------------SKADLDKEKKIQETESNAQMIAS 157

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +   V+      V  ET    I I I DQ     F+  S+    + I V+  I +VL  
Sbjct: 158 VMREEVSKG---TVEIETQEQTITIRIKDQ---GSFESGSAELNYDFIPVIDLIRDVLVG 211

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHR 319
               IS+ GHTD  P  +     NW+LS  RA S  + L  +G + + R   ++G+A  R
Sbjct: 212 IQGTISVEGHTDNVPIASSRFRSNWQLSSARAISVAEELFSTGQLDQGRF-AVTGYADTR 270

Query: 320 LKIASDPM--NSANRRIDILVED 340
             + +D     + NRR++I+++ 
Sbjct: 271 PLVPNDTPAHRATNRRVEIIIKQ 293


>gi|197105150|ref|YP_002130527.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
 gi|196478570|gb|ACG78098.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
          Length = 301

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 45/330 (13%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
           DQ I+IKK        ++ G+WK+ YADF+T +MAFFL+MW+IN T  + K+ I  YF P
Sbjct: 5   DQPIVIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLLMWLINTTSPEQKQGIADYFAP 64

Query: 72  FGKNLMTASKG-IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              +  ++  G I          S++     I E +  +S +   G      +   LE  
Sbjct: 65  ASVSQTSSGAGGILGGTALGTDGSKSAGASPIIEELAPDSRNPNDGKNRDASKSDSLE-- 122

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                        +  L  ++ K E       ++    +++   
Sbjct: 123 --------------------------AASTQALRDALQKREEAAFASAAQSLRQSLQDMP 156

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +L+K I                + + T  G+ I ++DQ    MF+  SS P     +
Sbjct: 157 ELAELSKNI----------------IIDQTPEGLRIQLVDQEGRSMFNAGSSQPNDRAKL 200

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L+ + +V+      +SI GHT A+   + A  +W LS  RA ++ ++L  SGV  DR+ 
Sbjct: 201 LLRAVSKVINQLPNRVSIYGHTSANANGSRAESDWPLSAARADASRRILQGSGVDPDRVY 260

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVED 340
           ++SG A        DP  + NRRI I++  
Sbjct: 261 QVSGKAASEPLYPDDPTLAGNRRIAIVLLR 290


>gi|218710365|ref|YP_002417986.1| flagellar motor protein MotB [Vibrio splendidus LGP32]
 gi|218323384|emb|CAV19561.1| Flagellar motor protein [Vibrio splendidus LGP32]
          Length = 315

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 109/324 (33%), Gaps = 31/324 (9%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
               P  L  W   +AD M++LM FF+++   +  D    K I               K 
Sbjct: 7   CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  QN  E     K    I +       +        ++     +  + +     +   
Sbjct: 56  AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                      GK    S    ++   ++         ++         ++ L + I   
Sbjct: 116 GTMRDQGKMTGGKSAEVSAHNNQNSESDQQQQQAQEQSQE---------METLMESIKKA 166

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   +       +  E     I+I I ++     F   S+   P+   +++++ E++   
Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220

Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
             ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A    
Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279

Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342
              +D       NRR++I +   +
Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303


>gi|264676590|ref|YP_003276496.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|262207102|gb|ACY31200.1| OmpA/MotB [Comamonas testosteroni CNB-2]
          Length = 355

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q IIIK+        ++ G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  M+   G  +  +                                        
Sbjct: 62  FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  N     H +   +   +               +  +   L  L  +    +  
Sbjct: 88  -------NDLSKVHGQVRRSESEDNANRRSSQAMGRADESARDAQRLHALKAKVDSMIAN 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I + +                T  G++I I+D +N PMFD  S++  P  
Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG  + ++   IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+  
Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPL 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           D+++++ G A   L +  +P  + NRRI I V  ++
Sbjct: 245 DKLARVVGMASSDLLLPEEPRAAQNRRITITVLTKE 280


>gi|296391793|ref|ZP_06881268.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAb1]
          Length = 347

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 55/334 (16%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N+Q II+K+        ++ GSWKI +ADF T +MAFFLV+W++++   + KKAI  YF
Sbjct: 2   DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   +AS  + D                     T      K  +   + Q    E+
Sbjct: 61  QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I    + Q                                        ++     ++R+
Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAENLAEQVERE 127

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L +  +      +  +    + FE TR G+ I I+D  N PMFD  S+   P   
Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + E +      ISI GHTDA P+       NW LS +RA +A + L+  G  E +
Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQ 247

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I+++ G+A  RL    DP+N  NRRIDI+V  R+
Sbjct: 248 IAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281


>gi|323498631|ref|ZP_08103623.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
 gi|323316329|gb|EGA69348.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
          Length = 314

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/318 (19%), Positives = 111/318 (34%), Gaps = 31/318 (9%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
            L  W   +AD M++LM FF+++   +  D    K I               K  F  QN
Sbjct: 12  GLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQN 60

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
             E     K    I +       +        ++     +  + +               
Sbjct: 61  RLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG----- 115

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                 +D  K T  +      +N        ++  + +  + L+ L + I   L   + 
Sbjct: 116 ----TQRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIE 171

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 +  E     I I I ++     F + S+   P+   ++++I E++     +I +
Sbjct: 172 QGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGIIRV 225

Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326
            GHTD     +   R NW LS  RA S  Q + K  G +  R+ ++ G A       +D 
Sbjct: 226 SGHTDNQRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTPQRL-RVRGMADTEPLGPNDT 284

Query: 327 M--NSANRRIDILVEDRQ 342
               S NRR++I +   +
Sbjct: 285 EAQRSRNRRVEISIMQGE 302


>gi|238026965|ref|YP_002911196.1| OmpA/MotB [Burkholderia glumae BGR1]
 gi|237876159|gb|ACR28492.1| OmpA/MotB [Burkholderia glumae BGR1]
          Length = 312

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/330 (24%), Positives = 123/330 (37%), Gaps = 64/330 (19%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           II+++        ++ G+WKI YADF+T +MAFFL+MW++ +T    ++ IE YFN    
Sbjct: 19  IIVRRVKRDAHEGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKYERQGIESYFNTPLS 78

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L+                       S+      +  D   G+ N  +Q           
Sbjct: 79  ALLGG-----------SADGSGTARSSVINGGGHDLSDTHGGNGNATQQAAP-------- 119

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                                                   +PP S         K++L  
Sbjct: 120 -------------------------------------ARSVPPDSANDARLALLKQQLTA 142

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L                   +   TTR G+ I I+D R+ PMF   SS        +L +
Sbjct: 143 LVD------ENPKLKAFKNQIRLSTTREGLRIEIVDSRSRPMFATGSSRLEDYAYDILFQ 196

Query: 255 IGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           IG VL      +S+ GHTDA P+        NW LS +RA +A + L+   + ED++ ++
Sbjct: 197 IGGVLNQVDNRVSLAGHTDAVPYSGGIAGYSNWELSSERANAARRALVAGHLREDKLLQV 256

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            G A              NRRI ILV +++
Sbjct: 257 RGLADVLPFDRGVADAEVNRRISILVLNKE 286


>gi|299531265|ref|ZP_07044675.1| OmpA/MotB [Comamonas testosteroni S44]
 gi|298720672|gb|EFI61619.1| OmpA/MotB [Comamonas testosteroni S44]
          Length = 355

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q IIIK+        ++ G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  M+   G  +  +                                        
Sbjct: 62  FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  N     H +   +   +               +  +   L  L  +    +  
Sbjct: 88  -------NDLSKVHGQVRRSESEDNANRRSSQAMGRADESARDAQRLHALKAKVDSMIAN 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I + +                T  G++I I+D +N PMFD  S++  P  
Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG  + ++   IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+  
Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPL 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           D+++++ G A   L +  +P  + NRRI I V  ++
Sbjct: 245 DKLARVVGMASSDLLLPEEPRAAQNRRITITVLTKE 280


>gi|326794296|ref|YP_004312116.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326545060|gb|ADZ90280.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 334

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 116/323 (35%), Gaps = 39/323 (12%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +    L ++   +AD M++LM FF+++      D    K +               
Sbjct: 7   QDCPECIEGLPAYMGTFADLMSLLMCFFVLLLSFAEMDVLKFKQLAGSMREA-------- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
              F  Q   E  S       I +  +    +    +  ++K   R EN +  L     +
Sbjct: 59  ---FGVQKQIEAQSIPMGTSIIAQEFSPGRPEPTPINEVRQKADDRPENTLEVLCKPDTA 115

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E  +            + KS                         ++R+K++Q   +   
Sbjct: 116 ELNEQEGAGQPSPSTFVDKSK----------------------ADLEREKQIQQTEEDAQ 153

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              S +  +     V  ET    I I + D+     F+  S+    + I V+  + EVL 
Sbjct: 154 QISSVMKEEISKGTVEVETQEQTITIRLKDK---GSFESGSAELNFDFIPVIDMVREVLI 210

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                IS+ GHTD  P  +     NW+LS  R+ +  + L  +G  +     ++GFA  R
Sbjct: 211 GVKGNISVEGHTDNIPIESRRFQSNWQLSSARSIAVAEELFATGALDQNRFSVTGFADTR 270

Query: 320 LKIASDP--MNSANRRIDILVED 340
             + +D     + NRR++I+++ 
Sbjct: 271 PLVPNDTSANRATNRRVEIVIKQ 293


>gi|163744356|ref|ZP_02151716.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381174|gb|EDQ05583.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
           indolifex HEL-45]
          Length = 309

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 32/332 (9%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            + ++ IIIK+  A     ++ G WK+ YADFMT +MAFFL++WI+ A+D++  + +  Y
Sbjct: 3   DKKNELIIIKRYDAEGGHAHHGGGWKVAYADFMTAMMAFFLLLWILAASDEEKLRGLANY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F P   +            +    +    +  +       ++       T  +     + 
Sbjct: 63  FTPTISD---------GGSSSDAAADLRPLMAAGVMTGAVDNTGNVKKPTFGRDNPMMVF 113

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                DS       +         +      P        A +R
Sbjct: 114 ---------------------DSRLRDKPSEVVVEYADAPEPAAAADPATVAAVEEAERR 152

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K  +  +A+ I+  + S     ++ + V  E +   + + ++DQ    +F + S+   P+
Sbjct: 153 KSEIDRMAEDIAERITSDGELSDLARNVRLEKSNGALTVQVLDQDERSLFTRGSAEVTPK 212

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           T  +L  IG+V+A   + + I GHTDA+ F  N    NW LS DRA +  + LM +G++ 
Sbjct: 213 TRELLLAIGDVIAEQNQPVEIIGHTDAATFGANNGYTNWELSADRANATRRTLMAAGING 272

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            R  ++SG A  +     DP+ + NRRI I +
Sbjct: 273 ARFMRVSGVADTQPINTIDPLAAENRRISIRL 304


>gi|221069302|ref|ZP_03545407.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
 gi|220714325|gb|EED69693.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
          Length = 353

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +  Q IIIK+        ++ G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  M+   G  +  +                                        
Sbjct: 62  FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  N     H +   +   +        T      +  +   L  L  +    +  
Sbjct: 88  -------NDLSKVHGQVRRSESEDNANRRSSQTMGRADESARDAQRLHALKAKVDTMIAN 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I + +                T  G++I I+D +N PMFD  S++  P  
Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L++IG  + ++   IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+  
Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVSAGMPL 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           D+++++ G +   L +  +P  + NRRI I V  ++
Sbjct: 245 DKLARVVGMSSSDLLLPEEPRAAQNRRITITVLTKE 280


>gi|288942642|ref|YP_003444882.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288898014|gb|ADC63850.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 305

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 57/317 (17%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ G+WKI +ADF T +MAFF+++WI+ +T +D K AI  YFN      M  +     
Sbjct: 19  GGHHGGAWKIAFADFATAMMAFFMLLWIMGSTTEDQKAAISDYFNNPSV-FMGIATSPSQ 77

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            Q     S  + ID      +   + + ++                              
Sbjct: 78  AQGEGTGSKPSLIDFEGAIDMGPPTPEPEL------------------------------ 107

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                         + D E+            L+  K L  ++  + + LA      L  
Sbjct: 108 -------------TALDPERLDELAREQDAARLAALKELLERKLDQSETLAPYKDQLLID 154

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +V +              + + I+D+ +  MFD  S+     T  +L+++G ++      
Sbjct: 155 IVPEG-------------LRVQIVDKEHRSMFDLGSAKLKDYTSDILRELGGLINQVPNR 201

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           IS+ GHTDA P   ++  NW LS +RA +A + L+  G+  D++ ++ GFA       SD
Sbjct: 202 ISLTGHTDARPLGGLSYSNWELSTERANAARRALVAGGMRADKVGRVVGFASTVPFDTSD 261

Query: 326 PMNSANRRIDILVEDRQ 342
           P N  NRRI ++V  R+
Sbjct: 262 PNNPINRRISLIVMTRE 278


>gi|260773298|ref|ZP_05882214.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
           69.14]
 gi|260612437|gb|EEX37640.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
           69.14]
          Length = 314

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 112/325 (34%), Gaps = 30/325 (9%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P  L ++   +AD M +LM FF+++   +  D    K I               K
Sbjct: 5   KRKCPPPGLPAYMGTFADLMALLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 53

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I +       +        ++     +  + +        
Sbjct: 54  FAFGVQNRLEVKDIPKGTSVIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGDSDRA 113

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                       G+    ST+        ++       +E+  +    + ++ + + I  
Sbjct: 114 GGNQRDDGQLTGGESPETSTE--------DSQDNEDAEQEQEQSEALSEEMEIVLENIKK 165

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L   +       V  E     ILI I   R    F + S+   P+   ++++I E++  
Sbjct: 166 ALDREIEQGA---VEVENLGQQILIRI---RERGAFPEGSAFLQPQFRPLVRQIAELVKD 219

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              ++ + GHTD     +   R NW LS  RA S  Q + + +G    R+ ++ G A   
Sbjct: 220 VPGIVQVTGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMERVTGFDHRRL-EVRGLADTA 278

Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342
               +D     S NRR++I +   +
Sbjct: 279 PVGPNDTEAQRSRNRRVEIGIMQGK 303


>gi|239908607|ref|YP_002955349.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
 gi|239798474|dbj|BAH77463.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
          Length = 346

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 117/312 (37%), Gaps = 36/312 (11%)

Query: 27  PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86
             + GSWK+ YAD +T +MAFFL+MW+++    + K+ I  YFN F             +
Sbjct: 21  GAHGGSWKVAYADLVTAMMAFFLLMWLLSNAPQEKKEEIANYFNEFSLFNNPGPSATLLD 80

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
                  +           +  +    +      +                         
Sbjct: 81  VGGVGPPAAVVGTGEERPDVAIDRGGKEPTGGQGQNVGDM-------------------- 120

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                            +    K +         +         + Q L ++I   L   
Sbjct: 121 --------------AGGKHEAPKTKAEADALAKAQAKAEAAAAAQAQALEQQIEQALEKA 166

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           V + +   V     +  + + I+D+   P++D      LP+   +L  + +V+      +
Sbjct: 167 VPE-LAGQVSVTQDKDKVRVEIMDKAERPLYDLGGVALLPDAQRILAAVTDVIRKEGVKV 225

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           +I GHTDA  +   A  NW LS  RA +A + ++ +G++ D +++++G++  R  +   P
Sbjct: 226 AIEGHTDAYRYSG-AYSNWDLSAGRALAARRFMVGAGLNPDAVAEVTGYSDTRPYVPGKP 284

Query: 327 MNSANRRIDILV 338
            +  NRRI +L+
Sbjct: 285 YDPKNRRISLLL 296


>gi|239996641|ref|ZP_04717165.1| flagellar motor protein MotB [Alteromonas macleodii ATCC 27126]
          Length = 309

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 117/322 (36%), Gaps = 39/322 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 10  PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         D     + Q++  +  +  + + + ++ S   + 
Sbjct: 59  VQNKIEVKDIPKGTSVIAMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQ 118

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               +   G+    +T+                S         + ++ +L KK++  L  
Sbjct: 119 KQRGEQRGGQSQQTATE----------------SSSSAEQSTDQSQMAELMKKVAQQLEK 162

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            + D     V  E+    + I I +      F   S+   P+   VL+KIG +LA     
Sbjct: 163 QILDG---SVEMESLGQQLTIRIREN---GSFSAGSAFLQPQFQPVLRKIGTLLADVPGE 216

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323
           I I GH+D     N   R NW LS  RA +  + +    G  E R+  + G A     + 
Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSAQRAVAVAEAMRTAPGFDESRM-SVVGKADTDPIVE 275

Query: 324 SDP---MNSANRRIDILVEDRQ 342
           +       + NRR++I +   +
Sbjct: 276 NATSPSDRAQNRRVEININQGK 297


>gi|332307428|ref|YP_004435279.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174757|gb|AEE24011.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 305

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/321 (21%), Positives = 120/321 (37%), Gaps = 39/321 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 9   PPAGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         D     T Q++  +  +  + + + ++ S   + 
Sbjct: 58  VQNKIEVKDIPKGTSVIAMEFRPGRPDPTPIETIQQQTIEMTQQMLEFQAGNEDSAGGRQ 117

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               + + G                        +  +  + K     +++AK++      
Sbjct: 118 KQRGEQKGG--------------------AAQQTASEQSSAKTTASQEEVAKQMKKVAQQ 157

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  + +   +  E+    ++I I +      F   S+   P+   +L+KIG +LA     
Sbjct: 158 LEKEILDGAIEMESLGQQLIIRIREN---GSFSAGSAFLQPQFKPILRKIGTLLADMPGD 214

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA 323
           I I GH+D+    N   R NW LS  RA +  + L K+ G  E R+  + G A     + 
Sbjct: 215 IEISGHSDSLVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRM-AVIGKADTAPLLG 273

Query: 324 SDP--MNSANRRIDILVEDRQ 342
            D     S NRR++I V+  +
Sbjct: 274 EDDAQARSRNRRVEIAVKQGK 294


>gi|149928472|ref|ZP_01916707.1| flagellar motor protein [Limnobacter sp. MED105]
 gi|149822806|gb|EDM82057.1| flagellar motor protein [Limnobacter sp. MED105]
          Length = 322

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 144/339 (42%), Gaps = 62/339 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
              + ++ II+ KK+      ++ G+WKI YADF+T +MAFFL+MW++ +T +   K I 
Sbjct: 2   AKSDEERPIIVVKKIKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSEGDLKGIS 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFN   K  +    G           +   +  +    ++++   +K GST++      
Sbjct: 62  DYFNSPLKVALVGGPG---------SGTATSVIDAGGTDLSRSVGQIKSGSTDKATNSSN 112

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                               +  + L  
Sbjct: 113 --------------------------------------------------ADATAEALER 122

Query: 187 KRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              KRL +L  +I   + +  +       ++ + T  G+ I I+D+RN PMFD  S++  
Sbjct: 123 AESKRLLELKGEIEGLIDASDLMKQFKNQIMLDITPEGLRIQIVDERNRPMFDSGSAVLK 182

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSG 303
                +L+ + ++L      +++ GHTDA+P+   N    NW LS DRA ++ + +  +G
Sbjct: 183 DYMKDILRNLTKLLNQVPNKLTLSGHTDATPYAAGNKGYSNWELSADRANASRREMTLAG 242

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + + ++ ++ G A        DP  + NRRI I+V +++
Sbjct: 243 MPDSKMLRVVGLASSVSLDEKDPYAAVNRRIAIVVMNKR 281


>gi|56461234|ref|YP_156515.1| flagellar motor protein MotB [Idiomarina loihiensis L2TR]
 gi|56180244|gb|AAV82966.1| Flagellar motor protein [Idiomarina loihiensis L2TR]
          Length = 312

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 117/346 (33%), Gaps = 49/346 (14%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M S   +++E +           +  P  L  W   +AD MT+LM FF+++   +  D  
Sbjct: 1   MASEKVRDEEQED---------CNCPPPGLPMWMATFADLMTLLMCFFVLLLAFSEMDVL 51

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             K I               K     QN  E     K    I +       +     T Q
Sbjct: 52  KFKQIAGSM-----------KYALGVQNKIEVKDIPKGTSVIAQEFRPGRPEPTPIETIQ 100

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           ++  +  +  + +          + +     E                           +
Sbjct: 101 QQTVEMTQQMLEFQEGESDFAGGQQTERGGQES---------------------DSADDQ 139

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           ++  A   +   Q   + +      L  +     +  E     I+I I +Q     F + 
Sbjct: 140 KEAEAENTEAMTQVSKELMRRIERQLENEIKAGTIELEQHGQQIIIRIREQ---GSFPEG 196

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL 299
           S+   P+   ++Q++   L      ++I GH+D     +     +W LS  RA +  + +
Sbjct: 197 SAFLQPQFRPIIQQVAGALKDIPGEVTISGHSDNEKLVSEIYSSDWDLSSKRAVAVAEEM 256

Query: 300 MK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           +K    SEDR+  + G++  +  + ++       NRR++I +   +
Sbjct: 257 LKVDDFSEDRLV-VMGYSDTKPLVPNNSEENRKRNRRVEISIMQGK 301


>gi|241763663|ref|ZP_04761713.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
 gi|241367138|gb|EER61504.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
          Length = 310

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 62/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T           
Sbjct: 3   EKKLQPIIIKRIKKSGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGEL------ 55

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                       +GI    N P + +    D + +           +   + + +    +
Sbjct: 56  ------------QGIAAYFNSPLKVAMVGGDGAGNSSSVIPGGGNDLSKVHGQVRRSDSD 103

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            +    ++   +                                            A + 
Sbjct: 104 QDKERRASIDTT----------------------------------------RAERAKQD 123

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             R++ L  KI + +      +     +  + T  G+ I I+D +N PMFD  S++  P 
Sbjct: 124 AARIKALQAKIDAMITENPRLNEYKSQIRIDVTPDGLQIQIVDNQNRPMFDSGSALVKPY 183

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+ 
Sbjct: 184 MRDILREIGAALGGVENRISLAGHTDAAPYGNSDRGYSNWELSADRANASRRELVSAGMP 243

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ ++ G A   L    +P   ANRRI I V  R+
Sbjct: 244 DAKLGRVVGLAASDLLEPDNPRAPANRRITITVLTRE 280


>gi|109897648|ref|YP_660903.1| flagellar motor protein MotB [Pseudoalteromonas atlantica T6c]
 gi|109699929|gb|ABG39849.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 305

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/321 (20%), Positives = 118/321 (36%), Gaps = 39/321 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 9   PPAGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         D     T Q++  +  +  + + + ++ S   + 
Sbjct: 58  VQNKIEVKDIPKGTSVIAMEFRPGRPDPTPIETIQQQTIEMTQQMLEFQAGNEDSAGGRQ 117

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               + + G                        +  +  + K     ++  K++      
Sbjct: 118 KQRGEQKGG--------------------AAQQTASEQSSAKTTASQEEANKQMKKVAQQ 157

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  + +   +  E+    ++I I +      F   S+   P+   +L+KIG +LA     
Sbjct: 158 LEKEILDGAIEMESLGQQLIIRIREN---GSFSAGSAFLQPQFKPILRKIGTLLADMPGD 214

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA 323
           I I GH+D+    N   R NW LS  RA +  + L K+ G  E R+  + G A     + 
Sbjct: 215 IEISGHSDSLVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRM-AVIGKADTAPLLG 273

Query: 324 SDP--MNSANRRIDILVEDRQ 342
            D     S NRR++I ++  +
Sbjct: 274 EDDAQARSRNRRVEIAIKQGK 294


>gi|88799579|ref|ZP_01115155.1| Flagellar motor protein [Reinekea sp. MED297]
 gi|88777664|gb|EAR08863.1| Flagellar motor protein [Reinekea sp. MED297]
          Length = 319

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 123/325 (37%), Gaps = 49/325 (15%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
              +    L +W   ++D M +LM FF+++   +  D    K +                
Sbjct: 7   DCPECEPGLPAWMATFSDLMALLMCFFVLLLSFSEMDALKFKRLAGSLR----------- 55

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  Q     +   K    I +  +    +    +  ++     L++++  L     + 
Sbjct: 56  NAFGVQAEINANDVPKGTSIIAKEFSPGRPEPTPLNVVRQDTVADLKDSLEILCQDTFTM 115

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             +    +                            ++++ I++ +  + L+D A +I+ 
Sbjct: 116 QEEAQGDQG--------------------------QMTRQVIISDEAMQELEDEAARIAQ 149

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            LS  +A+ +   +  ET    I+I + +Q     F   S     E + VL K+ E+L  
Sbjct: 150 ALSDEIAEGM---LQIETVNETIIIRVKEQ----SFTGGSDYVADEFLPVLDKVRELLVT 202

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319
           +   I + GHTD  P      R+NW LS  RA S  + L +   ++E+R   I G    +
Sbjct: 203 TPGDIWVEGHTDNVPIATSQFRNNWLLSAARALSVAEYLFIAPEMAEERF-TIVGHGSTK 261

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
              +++     + NRR++I+++   
Sbjct: 262 PIASNETPEGRAQNRRVEIIIKKPN 286


>gi|332141875|ref|YP_004427613.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551897|gb|AEA98615.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 309

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 115/322 (35%), Gaps = 39/322 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 10  PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         D     + Q++  +  +  + + + ++ S   + 
Sbjct: 59  VQNKIEVKDIPKGTSVIAMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQ 118

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               +   G                ++      S         + ++ +L KK++  L  
Sbjct: 119 KQRGEQRGG----------------QSQQTATQSSSSAEQSTDQSQMAELMKKVAQQLEK 162

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            + D     V  E+    + I I +      F   S+   P+   VL+KIG +LA     
Sbjct: 163 QILDG---SVEMESLGQQLTIRIREN---GSFSAGSAFLQPQFQPVLRKIGTLLADVPGE 216

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323
           I I GH+D     N   R NW LS  RA +  + +    G  E R+  + G A     + 
Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRM-SVVGKADTAPIVE 275

Query: 324 SDP---MNSANRRIDILVEDRQ 342
           +       + NRR++I +   +
Sbjct: 276 NATTSADRAKNRRVEININQGK 297


>gi|119897740|ref|YP_932953.1| flagellar motor protein MotB [Azoarcus sp. BH72]
 gi|119670153|emb|CAL94066.1| flagellar motor protein MotB [Azoarcus sp. BH72]
          Length = 357

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 51/337 (15%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            ++ Q I++K+        +  G+WKI YADF+T ++AFFL+MW++ +T     + I  Y
Sbjct: 3   DDSQQPIVVKRIKKGGGGHH-GGAWKIAYADFVTAMIAFFLLMWLLGSTAQGDLEGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  M   +G  D  +  +            E +T++   +K G     ++     
Sbjct: 62  FQNPLKLAMDGGEGSGDSSSIIKGG---------GEDLTRSVGQVKRGDVEGDRRINLD- 111

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                +    +        +++  + + 
Sbjct: 112 -------------------------------------AAKGRQAPSADGKGRDEAESNRE 134

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  +I + +            +L +    G+ I ++D++N PMF+ +S+   P 
Sbjct: 135 RSRLIDLKGRIEAIVEANPDLRQFKNQILMDIVNEGLRIQLVDEQNRPMFNSASADLRPY 194

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
           T  +L+ IG  L      +S+ GHTD++ +        NW LS +RA ++ + L+  G+ 
Sbjct: 195 TRDLLRAIGRALNDVGNSVSVSGHTDSAQYAGGERGFSNWELSSNRANASRRELVSGGLL 254

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             ++ ++ G A       ++PM++ NRRI I+V ++Q
Sbjct: 255 AGKVVRVVGLADTIPLNRANPMDAVNRRISIIVLNKQ 291


>gi|254787123|ref|YP_003074552.1| flagellar motor protein MotB [Teredinibacter turnerae T7901]
 gi|237687385|gb|ACR14649.1| putative chemotaxis protein MotB [Teredinibacter turnerae T7901]
          Length = 329

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 111/322 (34%), Gaps = 47/322 (14%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           + P  L +W   +AD M++LM FF+++   +  D    K +                  F
Sbjct: 10  ECPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------F 58

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN    +   K    I +  +    +    +   +      E ++      +      
Sbjct: 59  GVQNKLNVTDIPKGTSIIAQEFSPARPEPTPLNVIYQNTQDITEMSLEQDCAQEYDIEQG 118

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                   K +   K  D                     L  K ++   +LA+ ++  + 
Sbjct: 119 EEGVDGGIKVRVKQKLED---------------------LLQKTEQDAYELAEALNEQIE 157

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               +   +G L               R    F   S+   PE   V+ ++  VL     
Sbjct: 158 AGQVEVETRGRLIIIRI----------REKGSFVSGSAELAPEYRDVMGEVRSVLTLKPG 207

Query: 265 VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            I ++GH+D  P R    R NW LS  RA S  Q LM  G       ++SGFA  R  +A
Sbjct: 208 RIEVQGHSDNIPVRRGRYRSNWELSAARAVSVAQELMSGGALPPNRFEVSGFADTRPLVA 267

Query: 324 SDP--MNSANRRIDILVEDRQG 343
           +      + NRR++IL+  +QG
Sbjct: 268 NTTPENRARNRRVEILI--KQG 287


>gi|54308004|ref|YP_129024.1| flagellar motor protein MotB [Photobacterium profundum SS9]
 gi|46912430|emb|CAG19222.1| putative sodium-driven polar flagellar protein MotB [Photobacterium
           profundum SS9]
          Length = 310

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 105/322 (32%), Gaps = 39/322 (12%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
             P     W   +AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 7   KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 55

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E     K    I +       +        ++     +  + +           
Sbjct: 56  GVQNMLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHDGESDRAGGT 115

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                    GK    +T + ++                    +  +  + L + +   L 
Sbjct: 116 KRDAGKLTGGKSADVATQMNQNNQS-----------------EMSESQEQLLEVMQKALD 158

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             + D     +  E     ++I I ++     F   S+   P+   ++++I +++     
Sbjct: 159 REIQDGA---IEVENFGQQVVIRIKEK---GAFPAGSAFLQPKFRPLVRQIADLVKDVPG 212

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           +I I GHTD     +   R NW LS  RA S  Q + +  G    R+ ++ G A      
Sbjct: 213 IIRISGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRL-RVVGLADTAPLN 271

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           ++        NRR++I +   +
Sbjct: 272 SNKTAEERKVNRRVEISIMQGK 293


>gi|90410908|ref|ZP_01218922.1| flagellar motor protein [Photobacterium profundum 3TCK]
 gi|90328121|gb|EAS44432.1| flagellar motor protein [Photobacterium profundum 3TCK]
          Length = 310

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 105/322 (32%), Gaps = 39/322 (12%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
             P     W   +AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 7   KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 55

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E     K    I +       +        ++     +  + +           
Sbjct: 56  GVQNMLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHDGESDRAGGT 115

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                    G+    +T + ++                    +  +  + L + +   L 
Sbjct: 116 KRDAGKLTGGQSADVATQMNQNNQS-----------------EMSESQEQLLEVMQKALD 158

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             + D     +  E     ++I I ++     F   S+   P+   ++++I +++     
Sbjct: 159 REIQDGA---IEVENFGQQVVIRIKEK---GAFPAGSAFLQPKFRPLVRQIADLVKDVPG 212

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           +I I GHTD     +   R NW LS  RA S  Q + +  G    R+ ++ G A      
Sbjct: 213 IIRISGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRL-RVVGLADTAPLN 271

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           ++        NRR++I +   +
Sbjct: 272 SNKTAEERKVNRRVEISIMQGK 293


>gi|291617784|ref|YP_003520526.1| MotB [Pantoea ananatis LMG 20103]
 gi|291152814|gb|ADD77398.1| MotB [Pantoea ananatis LMG 20103]
 gi|327394202|dbj|BAK11624.1| chemotaxis protein MotB [Pantoea ananatis AJ13355]
          Length = 424

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/334 (23%), Positives = 124/334 (37%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  ++ I++ +K          GSWKI YADFMT +MAFF+VMW+++         I +Y
Sbjct: 2   KHGNRPIVLIRKRKHKKHEGGHGSWKIAYADFMTAMMAFFMVMWLLSIASPQQLIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T  +   D  +P              +  TK   ++K              
Sbjct: 62  FQTPLKVALTGGQRSSDSSSPIPGG---------GDDPTKKEGEVK-------------- 98

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                         K  D++    K +   L  L ++    ++ 
Sbjct: 99  ------------------------------KVVDMDAQKRKLDEIRLNRLREKLDQLIEA 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL+ L   +                +      G+ I IID +N PMF   S+   P  
Sbjct: 129 DPRLKALRPHL----------------IINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      ISI GHTD   +        NW LS DRA ++ + L+  G+  
Sbjct: 173 RDILRAIAPVLNDIPNRISIAGHTDDIQYAGGDKGYSNWELSADRANASRRELVIGGLDG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            +I +I G A           ++ NRRI +LV +
Sbjct: 233 GKILRIVGMADTMKLKNRGGDDAVNRRISLLVLN 266


>gi|262402758|ref|ZP_06079319.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
 gi|262351540|gb|EEZ00673.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
          Length = 304

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 110/312 (35%), Gaps = 31/312 (9%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W   +AD M++LM FF+++   +  D    K I               K  F  QN  E 
Sbjct: 2   WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEV 50

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
               K    I +       +        ++     +  + +              +    
Sbjct: 51  KDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGDSDRAGGNQRDSG--- 107

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                 K T  + + +  +         ++  A    ++++ +A+ I   LS  +     
Sbjct: 108 ------KLTGGQSAESSTQENQNTQSDMQQQQAKAMSEQMETVAESIKKALSREIEQGA- 160

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             +  E     I I I ++     F + S+   P+   ++++I +++      + + GHT
Sbjct: 161 --IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHT 215

Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--N 328
           D     +   R NW LS  RA S  Q + K  G    R+ ++ G A  +    +D     
Sbjct: 216 DNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADTQPLGPNDTEAQR 274

Query: 329 SANRRIDILVED 340
           + NRR++I +  
Sbjct: 275 ALNRRVEISILQ 286


>gi|163793054|ref|ZP_02187030.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159181700|gb|EDP66212.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 373

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/332 (23%), Positives = 148/332 (44%), Gaps = 31/332 (9%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N   I+IKK        ++ G+WK+ YADF+T +MAFFL++W++NAT ++ K  I  YF
Sbjct: 2   DNHATIVIKKVKKGGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLNATTEEQKMGISNYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +P   +                               T++     +G T+          
Sbjct: 62  DPTAISR-----------------------------STRSGSGGLLGGTSITVPGALKTP 92

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +     ++ Q    +   T   +   D  ++ +      ++E   +     E+++  + +
Sbjct: 93  SSPPQISTPQVARPQAERTESLDPDSDDPENIESRLGSREDEEGTVNQEVVEQLMREREQ 152

Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++ +D    I   +       ++ + +  ++T  G+ I +IDQ    +F   S+    +T
Sbjct: 153 QQFEDAEAAIKEAIEKSPELSDVAESIKVDSTPEGLRIQLIDQERIALFPNGSASMYEQT 212

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L K+ EV+A     I I GHTD+  F       NW LS DRA ++ +V++ +G+ E 
Sbjct: 213 RKLLIKVAEVVAALPNKIEITGHTDSKQFHPGSTYTNWDLSSDRANASRRVMVANGIDEK 272

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           RI ++ G A     +  DP +  NRRI I+++
Sbjct: 273 RIDEVVGKADRDPLVVEDPSDPTNRRISIILK 304


>gi|315125812|ref|YP_004067815.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
 gi|315014326|gb|ADT67664.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
          Length = 306

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 111/303 (36%), Gaps = 35/303 (11%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 9   PPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KFAFG 57

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I    T    +     T Q++  +  +  + + +  + S   + 
Sbjct: 58  VQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESSAGGRQ 117

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               +   G+    S ++  +                      ++++ DL KKI+  L  
Sbjct: 118 EQRGEKRGGESSSTSEEVAAATAVSAA---------------DQEQINDLVKKIAQQLEK 162

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            + D     +  E+    I+I I +      F   S+   P+   ++Q IG +L      
Sbjct: 163 QIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPQFKPIIQDIGRLLKDVPGE 216

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           I++ GHTD     N    +NW LS  RA +    L K  G  + R+  + G A  R  + 
Sbjct: 217 ITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQKVPGFDKTRMM-VVGRAETRPLVP 275

Query: 324 SDP 326
           +D 
Sbjct: 276 NDS 278


>gi|323492326|ref|ZP_08097479.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
 gi|323313373|gb|EGA66484.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
          Length = 330

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+    D  P++ G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   RQEQVVFKRSKKHDHEPHHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +          ++            
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLASDSSVPSRHDSTHTVNSFFDGDGD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P            ++
Sbjct: 112 --------------------------------------------GPETDSLIPGTFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           RL  LAK I   +    A      V    T  G+ + + D     MF +  +   P    
Sbjct: 128 RLAALAKVIEEAVRQSSAQG---NVNVTVTPQGLRVVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       I I GHTD++ F++      NW LS  RA  A   L+  G+ ++R
Sbjct: 185 LLLALAPVFKRVVNPIIISGHTDSTQFKHRFKQASNWELSASRANVARVTLVSGGMPDER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    DP +S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNNDDPESSENRRIELFVL 275


>gi|311279213|ref|YP_003941444.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
 gi|308748408|gb|ADO48160.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
          Length = 309

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   ++++++   +      GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 5   SHPIVVVRRRKHKNHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +T    + +  +P      +      +     N  +LK                
Sbjct: 65  TPLATAITGGPRVSNSSSPIPGGGDDFTQQQGEVKKEPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E   L  +  E    ++   
Sbjct: 109 -------------------------------------KRMEQNRLKKIRGELDQLIEADP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L                   G+ I IID +N PMF   S+   P    
Sbjct: 132 KLKALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      IS+ GHTD   + N      NW LS +RA ++ + L+  G+ + +
Sbjct: 176 ILRAIAPVLNEIPNKISLSGHTDDYQYANGDRGYSNWELSAERANASRRELVAGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A+          ++ NRRI +LV + Q
Sbjct: 236 VLRVVGMANTMKLQEHGGDDAINRRISLLVLNNQ 269


>gi|330501121|ref|YP_004377990.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328915407|gb|AEB56238.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 313

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 126/344 (36%), Gaps = 63/344 (18%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G    E    IIIK++        + G+WK+ +ADF   +MA F+V+WII     D
Sbjct: 1   MKPRGGDGHE----IIIKRRGKKGGHDEHGGAWKVAFADFTMAMMALFMVLWIIQPQTQD 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             +A     N    +      GIFD  +                                
Sbjct: 57  ASRANADMLNNPLVD---GGAGIFDGTSTTPL---------------------------- 85

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                                  + +  RD E      +                 P   
Sbjct: 86  ----------------DLDGVPVQVAPRRDPENRARTPQEDPGAALGEGLPGEPRRPHFA 129

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           E +   +  K +++LA ++ +  +          +  +    G+ I I D     MF++ 
Sbjct: 130 EPLQMQELAKLMKELALQLDAEAN----------IEVQVVPQGLRILIKDDAQRFMFNRG 179

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298
           SS   P    +L+++  +L      + I GHTD+ P+R      +NW LS DRA  A  V
Sbjct: 180 SSHLNPHFETLLRRLAGILGRVENHLIISGHTDSMPYRGVVGGYNNWNLSGDRALRARNV 239

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L+++G+    + +++  A     + +DP N ANRRI++L+   Q
Sbjct: 240 LVEAGLPTGNVLQVAAQADGMPLLPNDPENGANRRIELLLLTSQ 283


>gi|319764525|ref|YP_004128462.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|317119086|gb|ADV01575.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
          Length = 312

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 131/337 (38%), Gaps = 63/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T     +     
Sbjct: 3   EKKLQPIIIKRIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQ----- 56

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
               G     AS      Q      + + +       ++K                    
Sbjct: 57  ----GIAAYFASPLKVAMQGGDGAGNSSSVIPGGGNDLSKVHGQ---------------- 96

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                             + +S ++         +     A   
Sbjct: 97  ----------------------------------VRRSDSESNTSTRSIDTVRAERARLD 122

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            +R++ L  KI + +      +     +  + T  G+ I I+D +N PMFD  S++  P 
Sbjct: 123 AQRIKALQSKIDAMITENPRLNEYRSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 182

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+ 
Sbjct: 183 MRDILREIGAALGSVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 242

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + R+ ++ G A   L    +P    NRRI I V   +
Sbjct: 243 DARLGRVVGLAASDLLEPDNPRAPVNRRITITVLTHE 279


>gi|149908742|ref|ZP_01897403.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
 gi|149808284|gb|EDM68223.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
          Length = 334

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/327 (23%), Positives = 121/327 (37%), Gaps = 41/327 (12%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           + IIIK+K          G+WK+ +ADFM  LMAFF+V+WI+  +D D +K   +     
Sbjct: 3   ESIIIKRKRRSRGKSKGGGAWKVAFADFMLALMAFFMVLWILAVSDADERKEFSENIRN- 61

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +L  +    FD    P  +S       +D                             
Sbjct: 62  -YSLFESESNPFDFSGNPLPTSIGADLSVLDSKHQP------------------------ 96

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                  ++H  +  T  S   +      D         N  L               +L
Sbjct: 97  -----DLTKHSVSKKTARSLNQRTADDEGDSGYGDKPMMNSLLKGQLTSPDQLALLASKL 151

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + +   I             + +  E    G+ I + D     MF + S+   P    VL
Sbjct: 152 EAITDSI----------GAAENIDIEVVPQGLRILLHDNAKHKMFRRGSAQMTPFFQDVL 201

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           + +  V       + I GHTD S F N A  NW LS  RA  A Q+L   G+  +R++++
Sbjct: 202 RSLAPVFIPIENKLMISGHTDRSKFHNAAFTNWELSSQRALQARQMLQIGGMPRERVAQV 261

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVE 339
              +      A++P +S NRRI++L+ 
Sbjct: 262 VAMSDTMPIDAANPKSSVNRRIELLLL 288


>gi|323224726|gb|EGA08995.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
          Length = 309

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 121/333 (36%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T   G+   ++P      +      +     N  +LK                 
Sbjct: 66  PLATAVTGGTGLPIAESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R             PMF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|330826741|ref|YP_004390044.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329312113|gb|AEB86528.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 311

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 131/337 (38%), Gaps = 63/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q IIIK+         + G+WKI YADF+T +MAFFL+MW++ +T     +     
Sbjct: 3   EKKLQPIIIKRIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQ----- 56

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
               G     AS      Q      + + +       ++K                    
Sbjct: 57  ----GIAAYFASPLKVAMQGGDGAGNSSSVIPGGGNDLSKVHGQ---------------- 96

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                             + +S ++         +     A   
Sbjct: 97  ----------------------------------VRRSDSESNTSTRSIDTVRAERARLD 122

Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            +R++ L  KI + +      +     +  + T  G+ I I+D +N PMFD  S++  P 
Sbjct: 123 AQRIKALQSKIDAMITENPRLNEYRSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 182

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+ +G+ 
Sbjct: 183 MRDILREIGAALGSVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 242

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + R+ ++ G A   L    +P    NRRI I V   +
Sbjct: 243 DARLGRVVGLAASDLLEPDNPRAPVNRRITITVLTHE 279


>gi|149191103|ref|ZP_01869362.1| flagellar motor protein MotB [Vibrio shilonii AK1]
 gi|148835031|gb|EDL52009.1| flagellar motor protein MotB [Vibrio shilonii AK1]
          Length = 294

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 105/313 (33%), Gaps = 35/313 (11%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I               K  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +        ++     +  + +                    
Sbjct: 50  DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDRAGGNQRDDGKMTG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G+   ++   +                    + +  + L  L + I   L   +      
Sbjct: 110 GQTADRTQKNQIGT-------------ASAQSEQENEDLDKLEEIIKKALQQEIKQGA-- 154

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V  +     ++I I ++     F + S+   P+   +++++ +++      + + GHTD
Sbjct: 155 -VEVDNLGQQLVIRIQEK---GAFPEGSAFLQPKFRPLVRQVADLVKDIPGQVRVSGHTD 210

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329
             P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A       +D     +
Sbjct: 211 NLPLDSELYRSNWDLSSQRAVSVAQEMEKVKGFSHQRL-RVLGVADTEPLGPNDTERQRA 269

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 270 RNRRVEISIMQGE 282


>gi|226944522|ref|YP_002799595.1| flagellar motor protein [Azotobacter vinelandii DJ]
 gi|226719449|gb|ACO78620.1| Flagellar motor protein [Azotobacter vinelandii DJ]
          Length = 306

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/334 (20%), Positives = 129/334 (38%), Gaps = 69/334 (20%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +++ +II ++       ++ G+WKI +ADFMT LMA FLV+W++  + +  K A+ +YF 
Sbjct: 2   SERPVIIIRRKKRGGEGHHGGAWKIAFADFMTALMALFLVLWMLANSGEAQKAAVAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +         +N       +                                  
Sbjct: 62  TPLVVALMGGDREGASENVIPGGGPDPT-------------------------------- 89

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                               +E  +         + ++++E   L  L +    A+    
Sbjct: 90  -------------------FAEGERFRIDPQLASRLVDEQERARLRQLERRIREALSINP 130

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L++L  +I                L + T  G+ I ++D    PMF+  S+   P    
Sbjct: 131 ILKELKDQI----------------LIDLTPEGLRIQLVDTEQRPMFEIGSARVAPYMRT 174

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ +  +L      I I GHTD+ P+        NW LS DRA ++ + L+  G++ ++
Sbjct: 175 LLRTLAPMLNELPNRIQISGHTDSLPYAGGEAGYSNWELSADRANASRRELIAGGLALEK 234

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + + SG +         P ++ANRRI ++V D +
Sbjct: 235 LLRTSGMSDRIPFEGVAPNDAANRRIAVIVLDSR 268


>gi|90579839|ref|ZP_01235647.1| flagellar motor protein [Vibrio angustum S14]
 gi|90438724|gb|EAS63907.1| flagellar motor protein [Vibrio angustum S14]
          Length = 307

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 108/322 (33%), Gaps = 39/322 (12%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
                   W   +AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 7   KCKKGAPPWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAF 55

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E +   K    I +       +        ++     + ++ +           
Sbjct: 56  GVQNMLEVNDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRSLDFHEGESDRAGGT 115

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                    G+    +T                    +    + ++  + L + ++  L 
Sbjct: 116 QRDAGKLTGGQSKKTATQNN-----------------ENDESEAEQMQEKLKEVLTKALE 158

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             ++D     +  E     ++I I ++     F + S+   P+   +++++  ++     
Sbjct: 159 REISDK---IIEIENLGQQLVIRIREK---GSFPEGSAFLQPKFKPLVRQVAMLVKDVPG 212

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           +I + GHT +    +   R NW LS  RA S  Q + K  G    ++ ++ G A  +   
Sbjct: 213 IIRVTGHTASDKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKM-RVVGLADTQPIA 271

Query: 323 ASDPMN--SANRRIDILVEDRQ 342
            +      + NRR++I +   +
Sbjct: 272 DNKTQEGKAKNRRVEISIMQGK 293


>gi|213054486|gb|ACJ39422.1| PomB2 [Aeromonas hydrophila]
          Length = 297

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 108/325 (33%), Gaps = 47/325 (14%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P  L  +   +AD M++LM FF+++      D    K I                
Sbjct: 3   KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I         +     T  ++     +  + +        
Sbjct: 52  KAFGVQNILEVKDIPKGTSVIALEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADQA 111

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
              +        G                           +  A K++++  DLAK+++ 
Sbjct: 112 GGHDKSEDKLVGGDT-------------------------RQEAQKKQEQSNDLAKELAE 146

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +   + D     +  E     I+I I ++     F   S+   P+   V++K+  +L  
Sbjct: 147 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVATLLKD 200

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
               I+I GHTD     +   + NW LS  RA +    ++K  G    R+  + G A  +
Sbjct: 201 VPGEITISGHTDDVATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 259

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
             + +    +   NRR++I +   +
Sbjct: 260 PLVPNTTPENRRMNRRVEISIMQGK 284


>gi|15640909|ref|NP_230540.1| flagellar motor protein MotB [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588125|ref|ZP_01677872.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
 gi|121728326|ref|ZP_01681356.1| chemotaxis protein PomB [Vibrio cholerae V52]
 gi|147674334|ref|YP_001216371.1| flagellar motor protein MotB [Vibrio cholerae O395]
 gi|153216012|ref|ZP_01950234.1| flagellar motor protein [Vibrio cholerae 1587]
 gi|153802297|ref|ZP_01956883.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
 gi|153817212|ref|ZP_01969879.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
 gi|153823690|ref|ZP_01976357.1| chemotaxis protein PomB [Vibrio cholerae B33]
 gi|153827046|ref|ZP_01979713.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
 gi|153830558|ref|ZP_01983225.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
 gi|227081069|ref|YP_002809620.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
 gi|229505502|ref|ZP_04395012.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
 gi|229510828|ref|ZP_04400307.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
 gi|229513008|ref|ZP_04402474.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
 gi|229517949|ref|ZP_04407393.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
 gi|229523310|ref|ZP_04412717.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
 gi|229525508|ref|ZP_04414913.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
           VL426]
 gi|229530005|ref|ZP_04419395.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
 gi|229608521|ref|YP_002879169.1| flagellar motor protein MotB [Vibrio cholerae MJ-1236]
 gi|254285566|ref|ZP_04960530.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
 gi|254848028|ref|ZP_05237378.1| flagellar motor protein PomB [Vibrio cholerae MO10]
 gi|262191489|ref|ZP_06049674.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
 gi|297581278|ref|ZP_06943202.1| chemotaxis protein PomB [Vibrio cholerae RC385]
 gi|298498985|ref|ZP_07008792.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
 gi|9655348|gb|AAF94055.1| chemotaxis protein PomB [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|51241597|emb|CAH17908.1| flagellar motor protein PomB [Vibrio cholerae]
 gi|121547616|gb|EAX57715.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
 gi|121629381|gb|EAX61811.1| chemotaxis protein PomB [Vibrio cholerae V52]
 gi|124114525|gb|EAY33345.1| flagellar motor protein [Vibrio cholerae 1587]
 gi|124122179|gb|EAY40922.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
 gi|126512246|gb|EAZ74840.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
 gi|126518793|gb|EAZ76016.1| chemotaxis protein PomB [Vibrio cholerae B33]
 gi|146316217|gb|ABQ20756.1| chemotaxis protein PomB [Vibrio cholerae O395]
 gi|148873956|gb|EDL72091.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
 gi|149739087|gb|EDM53383.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
 gi|150424428|gb|EDN16365.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
 gi|227008957|gb|ACP05169.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
 gi|227012713|gb|ACP08923.1| chemotaxis protein PomB [Vibrio cholerae O395]
 gi|229333779|gb|EEN99265.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
 gi|229339089|gb|EEO04106.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
           VL426]
 gi|229339673|gb|EEO04688.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
 gi|229344664|gb|EEO09638.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
 gi|229349901|gb|EEO14855.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
 gi|229350793|gb|EEO15734.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
 gi|229357725|gb|EEO22642.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
 gi|229371176|gb|ACQ61599.1| Flagellar motor rotation protein MotB [Vibrio cholerae MJ-1236]
 gi|254843733|gb|EET22147.1| flagellar motor protein PomB [Vibrio cholerae MO10]
 gi|262032637|gb|EEY51190.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
 gi|297534594|gb|EFH73431.1| chemotaxis protein PomB [Vibrio cholerae RC385]
 gi|297543318|gb|EFH79368.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
          Length = 318

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 110/324 (33%), Gaps = 31/324 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                  +     G         + +    ++        ++  A    ++++ +A+ I 
Sbjct: 114 AGGNQRDSGQLTGG---------QSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS  +       +  E     I I I ++     F + S+   P+   ++++I E++ 
Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + + GHTD     +   R NW LS  RA S  Q + K       R+ ++ G A  
Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADT 277

Query: 319 RLKIASDPMNSA--NRRIDILVED 340
           +    +D       NRR++I +  
Sbjct: 278 QPLGPNDTEAQRATNRRVEISILQ 301


>gi|262274767|ref|ZP_06052578.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
 gi|262221330|gb|EEY72644.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
          Length = 309

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 111/321 (34%), Gaps = 42/321 (13%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 8   PPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 56

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I +       +        ++     +  + +            
Sbjct: 57  VQNLLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFQEGESDRAGGAQ 116

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             + + E G                        +  +    + ++  + ++      +  
Sbjct: 117 RDSAELEGGS-----------------------AASEASMQEMEQDTEQMSSVAQMVVQA 153

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  E     ++I I +      F   S+   P+   ++++I +++     +
Sbjct: 154 LEREVEEGAVEVENLGQQLIIRIREN---GAFPAGSAFLQPKFRPLVRQIADLVKDVPGI 210

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           + + GHTD SP  +   R NW LS  RA S  Q + K  G    R+ ++ G A    ++ 
Sbjct: 211 VRVSGHTDDSPLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDPMRM-RVEGLAGSSPRVP 269

Query: 324 SDP--MNSANRRIDILVEDRQ 342
           +D     + NRR++I +   +
Sbjct: 270 NDTPENRAQNRRVEIAIMQGK 290


>gi|332187888|ref|ZP_08389621.1| ompA family protein [Sphingomonas sp. S17]
 gi|332012049|gb|EGI54121.1| ompA family protein [Sphingomonas sp. S17]
          Length = 297

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 126/344 (36%), Gaps = 52/344 (15%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M        E  + +I+KK +A     ++ G+WK+ YADF+T +MAFFL++W++ AT + 
Sbjct: 1   MARAPHGKNEPPKIVIVKKIIADGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLGATTEK 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +K I  YF P   +  +   G              K   +         V+ + G    
Sbjct: 61  QRKGIADYFAPTLLDTKSVGVGGGVLNGGAGVGRMQKDSSTAIVQTLVTRVNGQGGDKPG 120

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                 L N      + +  +  K  L                                 
Sbjct: 121 TGNKGSLRNPDALARDQKTFDAVKREL--------------------------------- 147

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                             +           + + V F  T +G+ I ++D  +  MF   
Sbjct: 148 ------------------LRKMEVTPELKKLAQQVRFIPTDSGLRIDLVDNADYSMFSMG 189

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299
           ++   P    ++  I + +A     I IRGHTD+ P+ +    +NW LS  RA +  + L
Sbjct: 190 TTSLEPAASQLIGTIAKTVADVPNTIMIRGHTDSVPYGDPRAMNNWMLSSGRAEATRRRL 249

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
              G+ E R  +I G A     I  +P +  NRR+ I +  R+G
Sbjct: 250 AAGGLPESRFERIEGVADREPMITGNPSDPRNRRVAITLLYRKG 293


>gi|254225118|ref|ZP_04918732.1| chemotaxis protein PomB [Vibrio cholerae V51]
 gi|125622505|gb|EAZ50825.1| chemotaxis protein PomB [Vibrio cholerae V51]
          Length = 318

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 110/324 (33%), Gaps = 31/324 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 5   QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 54  KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDR 113

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                  +     G         + +    ++        ++  A    ++++ +A+ I 
Sbjct: 114 AGGNQRDSGQLTGG---------QSAETSVQDSQNTQSEMQQQQAQAMSEQMETVAESIK 164

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS  +       +  E     I I I ++     F + S+   P+   ++++I E++ 
Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + + GHTD     +   R NW LS  RA S  Q + K       R+ ++ G A  
Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADT 277

Query: 319 RLKIASDPMNSA--NRRIDILVED 340
           +    +D       NRR++I +  
Sbjct: 278 QPLGPNDTEAQRATNRRVEISILQ 301


>gi|192361715|ref|YP_001982600.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
 gi|190687880|gb|ACE85558.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
          Length = 294

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 120/326 (36%), Gaps = 62/326 (19%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   +D   N   W + YADF+T+L AFF+VM+ I+   +   + + Q F    K     
Sbjct: 3   RRRREDIHVNHERWLVSYADFITLLFAFFVVMYSISQVSESKYRVLSQTFVQAFK----- 57

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                        ++  + +      +T ++  +      +    Q   +    + + Q 
Sbjct: 58  ------------PTTDIQSNQEPAAQLTPSNDVITPVDLGKTAVEQVTNDEQVPIISDQA 105

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +     L +                                    +K    L  ++  +
Sbjct: 106 PKDTTPQLEKP-----------------------------------VKTSDELAQISDLV 130

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   S L+ + +   +   +    + I + D     +F   ++ P  + +V+  +I  +L
Sbjct: 131 TEKFSQLIDEQL---IQVSSNELWLQIELKDS---ILFASGNADPSAQAMVIFDEISRIL 184

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            + +  I + G TD  P  +     NW LS  RA +  ++L   G++ +R++ + G+   
Sbjct: 185 KNYSNPIQVEGFTDNVPINSARYPTNWELSSARASAIVKILASKGIAPERLAAV-GYGEF 243

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
           +   ++      + NRR+ I+V  R+
Sbjct: 244 QPVASNATPEGRAQNRRVAIMVAKRK 269


>gi|313902670|ref|ZP_07836069.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
 gi|313467108|gb|EFR62623.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
          Length = 364

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 113/314 (35%), Gaps = 46/314 (14%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + YAD +T+L+AFF+VM+ ++  +    +A+            TA + + D +    
Sbjct: 75  RWLLTYADLITLLLAFFVVMYAMSEVNAARYQALAASLRAAFA---TAGETLIDTEGISP 131

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            + +    L+ D            GS     +                            
Sbjct: 132 DARKVLDGLNRDTGQPYPPALPPAGSPEAPGEGS-------------------------- 165

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                  + +     +    +      +    ++ + ++R++ L ++++  L       +
Sbjct: 166 ------GEPSGEWPGLPGLPSPGQGAGTAVPPMSAEERERMEGLVERVNEALREA---GL 216

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                   T  G+ I   DQ     FD   +   PE   +L+++  +LA     I + GH
Sbjct: 217 GGRASARLTERGVAIIFDDQ---VFFDLGRAELRPEGRDLLRRLAPILAQVPGTILVEGH 273

Query: 272 TDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM-- 327
           TD  P R      NW LS  RA +  + L +  G+   R+   +G+   R +  +     
Sbjct: 274 TDNLPIRSGRYPSNWELSTARATTVVRYLAEQAGLDPRRL-AAAGYGEWRPRYPNTSAAN 332

Query: 328 NSANRRIDILVEDR 341
            + NRR++I++   
Sbjct: 333 RARNRRVEIVLLRP 346


>gi|170748396|ref|YP_001754656.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654918|gb|ACB23973.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 286

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 56/327 (17%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           IIIKK        ++ G+WKI YADF+T +MAFFL+MW+I+ T  + K  + +YF+P   
Sbjct: 4   IIIKKVKKAGHA-HHGGAWKIAYADFVTAMMAFFLLMWLISMTTQEQKIGLAEYFSPAAL 62

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +  T+  G               +D + ++  T    +                      
Sbjct: 63  SPATSGAGGILYG--------TALDTAGNKPSTPRDAE---------------------- 92

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                         R S + +   + T    +   + +  +  +          ++ LQ 
Sbjct: 93  --------------RGSAEREVTARPTSPGLTSELDASRPVANVQANWSAIASLRQALQT 138

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +               + K ++ E T+ G+ +S++DQ    MF + S  P   T  VL+ 
Sbjct: 139 MPDIAE----------LSKNIVIEPTKEGVNVSLVDQDGRSMFREGSVEPYERTRRVLEA 188

Query: 255 IGEVLAHSTEVISIRGHTD-ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +   L      +SI G+T  A P    A + W LS  RA +  ++L  +GV  D  S +S
Sbjct: 189 LAPALRRMPNRLSITGYTAVARPGSARAGEPWSLSAGRALAVREILSGAGVPNDNFSAVS 248

Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340
           G          +P  + NRR+ I + +
Sbjct: 249 GRGDTEPVFPDNPYLAPNRRVTITLLN 275


>gi|134094523|ref|YP_001099598.1| flagellar motor protein MotB [Herminiimonas arsenicoxydans]
 gi|133738426|emb|CAL61471.1| Chemotaxis protein MotB (Motility protein B) [Herminiimonas
           arsenicoxydans]
          Length = 327

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 61/336 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            E  + II+K+        +  G+WKI YADF+T +MAFFL+MW++ +T     + I  Y
Sbjct: 3   DEGLRPIIVKRIKKSGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTTKGNLQGIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+   K  M    G  D  +  +   ++   +   +   +N    K              
Sbjct: 62  FSTPLKVAMAGGSGSGDATSVIKGGGKDMTRIDGQQKKGENLTPTK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                            D E  + ++E   L  L +    A+  
Sbjct: 108 ----------------------------SLNLKDAEAELERQEMNRLKSLKERIEEAIDS 139

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L+    ++                L + T  G+ I I+D++N PMF  S +   P T
Sbjct: 140 IPSLRQYKNQL----------------LLDITSEGLRIQIVDEKNRPMFALSKADLQPYT 183

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
            ++L +I + L      IS+ GHTDA+P+ +      NW LS DRA ++ + L+  G+ E
Sbjct: 184 KLILHEIAKTLNDIPNRISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMEE 243

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G +   L    DP+N  NRRI I+V +++
Sbjct: 244 AKMLRVVGLSSAVLFDQKDPLNPINRRISIIVMNKK 279


>gi|300024596|ref|YP_003757207.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526417|gb|ADJ24886.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 424

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 92/421 (21%), Positives = 155/421 (36%), Gaps = 84/421 (19%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
           S+G ++  +   +I++++    D  ++ G WKI YADFMT +MAFFLVMW+INA D  T 
Sbjct: 2   SNGQEDVSSQPLVIVRRR-RSHDEEHHGGVWKIAYADFMTAMMAFFLVMWLINAADKKTI 60

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQN-------------------------PPERSSQNK 97
             +  YFNP        +    ++ N                            ++S+  
Sbjct: 61  VQVAAYFNPMRLTDRFEAPKGLEDLNEIDAKQNEEKSEKGLSQHPDQAQKLSAPKASKAN 120

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
           I  ++DE   K S      S   +K+    +N    L           S+T  S     +
Sbjct: 121 IGEAMDEEAQKRSASAGGKSAEAQKEEALFDNPGQLLDKLADEAKASQSMTAASPLDSSI 180

Query: 158 CKSTDLEKSINKEENYF---------------------------LPPLSKEKILAMKRKK 190
               D     + + +                             +      K       +
Sbjct: 181 SDPFDRADRRSGKSSAAQRSASQPNPAPAAPPAATAKASPPPSGVEGKDAAKNARALEAQ 240

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------------- 236
             +  A  +++      A+        +         + D  ++ +              
Sbjct: 241 DTKQAATALNAKDQNHAANAPKPSDAADVADEAKAKKLQDDISSALAKGSRAAPEIEVKA 300

Query: 237 -----------------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
                            F+  S+ P P  ++ + K+G+VL      I +RGHTD+  ++N
Sbjct: 301 TSEGLLVSLLDGADFGMFEVGSAKPRPALVLAMSKVGDVLKSLPGSIVVRGHTDSRAYKN 360

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              DNWRLS  RA  AY +L++ G++E R + I G A    KI S+     NRRIDIL++
Sbjct: 361 GNYDNWRLSAARAQMAYYMLVRGGIAETRFAAIEGRADRDPKIPSNREAPENRRIDILIK 420

Query: 340 D 340
           +
Sbjct: 421 E 421


>gi|304311521|ref|YP_003811119.1| Chemotaxis protein MotB [gamma proteobacterium HdN1]
 gi|301797254|emb|CBL45474.1| Chemotaxis protein MotB [gamma proteobacterium HdN1]
          Length = 459

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 75/333 (22%), Positives = 136/333 (40%), Gaps = 35/333 (10%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
              + ++ I+IK+         + G+WK+ +ADF+T +MA FLV+W+I +T    K AI 
Sbjct: 2   ATADANKPIVIKRVKKYA-AGAHGGAWKVAFADFVTAMMALFLVLWLIESTTQAEKLAIS 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YF+         S  + +             D    E ++  +   +       +  Q 
Sbjct: 61  MYFSNPTGYTEGGSPFVVNLGG-------GMRDTDTIERVSSPAPPTQEPDVMPDRNIQP 113

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           L+N                              S +      ++    +     +++   
Sbjct: 114 LDNI-------------------------QTNPSQEKSDLEKQQAEKQMQEQQLQEMHEQ 148

Query: 187 KRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           +  +  ++L + +   +            ++ + T  G+LI ++D+   PMFD   +   
Sbjct: 149 RETQEFEELKRALEEKIEADPTIGAFRDQIIIKITEDGLLIEVVDKDKRPMFDLGKTSVK 208

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGV 304
           P    +L+ I + L  +   +SI GHTDA PF       NW LS DRA +A + L+K+G+
Sbjct: 209 PYFNSILKAIAKTLEGTHNPLSISGHTDAVPFTESENYTNWELSSDRANAARRALLKAGM 268

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            +++I+++ G A   L     P    NRRI IL
Sbjct: 269 KKEQIARVVGLADSILFDEKHPDAPINRRISIL 301


>gi|319787078|ref|YP_004146553.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465590|gb|ADV27322.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 323

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 116/328 (35%), Gaps = 54/328 (16%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   ++  N+  +W I YAD MT+L+AFF+VM+ I+  ++   + +             
Sbjct: 3   RRKKHEEHGNH-EAWAIPYADLMTLLLAFFVVMYAISTLNEGKYRVLADALTAAF----- 56

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                        +    +++G+   +                 
Sbjct: 57  -------------------------GGAPRTINPVQVGNHQLQG-------------ADF 78

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  S  R          +  L  ++       +P    ++    + +++L  +A +
Sbjct: 79  DRPSPIQSGARSGPSAPSPAPNPTLLPALASHMRTGVPVDVSDRATVQRAQRQLGTIAAR 138

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS LV   +   +        + + I       +FD  S+        VL ++ +V
Sbjct: 139 LEEALSPLVDARL---ITVRRAELWLEVEINSD---ILFDTGSASLDASARQVLSRLADV 192

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +   +GV+ +R++ + G+  
Sbjct: 193 LRDTPNPVRVEGYTDDRPINTVQFPSNWELSAARAASVVHLFSANGVAPERLAMV-GYGE 251

Query: 318 HRLKIASDPMNS--ANRRIDILVEDRQG 343
           HR +  +        NRR+ ++V    G
Sbjct: 252 HRPRADNLTEEGRNRNRRVVLIVLAAPG 279


>gi|283133065|dbj|BAI63831.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci]
          Length = 341

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 83/335 (24%), Positives = 132/335 (39%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     +  S   IDL     ++ N        T           
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTPNPEVKTTPSPDT----- 101

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                        L   + E       +
Sbjct: 102 -------------------------------------------VPLEAETSETKAEEVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|114570105|ref|YP_756785.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114340567|gb|ABI65847.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 307

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 41/311 (13%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD-EQNPP 90
           +WK+ YADF+T +MAFFL+MW+IN T  + K+ I  YF P   +   +  G      +P 
Sbjct: 25  AWKVAYADFVTAMMAFFLLMWLINTTTPEQKRGIADYFAPASVSPSNSGSGAPLAGTSPG 84

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           +   Q   D S  + +   +  L                         +        + +
Sbjct: 85  DDGVQGSGDSSQRQRLAPTAPQLN-----------------------DRDRQQTPEGSPE 121

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           + +      ++ + ++  + +   L   S     AM+    L +L+              
Sbjct: 122 AVESVTEITASAMAEAQQRRDAAELHSASMSLRQAMQEMPELAELSN------------- 168

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               VL + T  G+ I +IDQ   PMFD  ++ P    + +L+ +  +       +S+ G
Sbjct: 169 ---HVLIDETPEGLRIQLIDQEGRPMFDPGATRPNERAVTLLRAVARIAERLPNRLSVAG 225

Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           HTD++P        NW LS DRA +A  VL ++G+S+DRI ++ G A        DP   
Sbjct: 226 HTDSAPAAPGADYTNWELSADRANAARSVLQRAGISDDRIYEVRGKAGSEPLYPDDPYMP 285

Query: 330 ANRRIDILVED 340
            NRRI +++  
Sbjct: 286 GNRRISVVLLR 296


>gi|283785634|ref|YP_003365499.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
           ICC168]
 gi|282949088|emb|CBG88694.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
           ICC168]
          Length = 309

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 80/334 (23%), Positives = 127/334 (38%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +++K++ A        GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 5   SHPIVVVKRRKAKGHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +T      D ++P      +      + H   N  +LK                
Sbjct: 65  TPLATAVTGGHRFSDSESPIPGGGDDFTQQKGEVHKQPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E   L  L  +    ++   
Sbjct: 109 -------------------------------------KRMEQSRLSKLRGDLDQLIESDP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L                   G+ I IID +N PMF   S+   P    
Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + L++ G+ + +
Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELVQGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A         P ++ NRRI +LV +RQ
Sbjct: 236 VLRVVGMAATMRLSDRGPEDAVNRRISLLVLNRQ 269


>gi|302189799|ref|ZP_07266472.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
           642]
          Length = 349

 Score =  172 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         +   + E       
Sbjct: 103 ---------------------------------------------PIETETAETKAEAVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  R+
Sbjct: 238 SQVARVVGYASSALYDHQNPTNPINRRIDIVVLTRK 273


>gi|253996630|ref|YP_003048694.1| flagellar motor protein MotB [Methylotenera mobilis JLW8]
 gi|253983309|gb|ACT48167.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
          Length = 312

 Score =  172 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 61/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +E  + II+K K+      ++ G+WKI YADF+T +MAFFL+MW++ +T    K+ I +Y
Sbjct: 3   EELRKPIIVK-KIKKGGGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKAQKEGISEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +     +         +S   I     + +TK    +K              
Sbjct: 62  FKTPLKVALMGGDSV--------GASDTLIKGGGGKDMTKKQGQVKPVDG---------- 103

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                     +   +     +  L    
Sbjct: 104 ---------------------------------------PPGKQKAVDIKDAKAALEKAE 124

Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++L+ L +KI  ++          K +L + T  G+ I I+D++N PMF+ + +   P 
Sbjct: 125 EQKLELLKEKIEKSIEDSPTLSKFKKQLLIDITTEGLRIQIVDEQNRPMFESAKAEMQPY 184

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG++L   T  IS+ GHTDA+P+ +      NW LS DRA ++ + L+  G+ 
Sbjct: 185 AKQILKEIGQMLNGVTNKISLSGHTDAAPYSSGEKGYSNWELSSDRANASRRELIAGGMD 244

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G +   L    DP+N  NRRI I+V ++Q
Sbjct: 245 EAKLLRVVGLSSVSLFDKDDPLNPINRRISIIVMNKQ 281


>gi|88859188|ref|ZP_01133829.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
 gi|88819414|gb|EAR29228.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
          Length = 290

 Score =  172 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 117/313 (37%), Gaps = 38/313 (12%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++  ++  D    K I               K  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLAMSEMDVLKFKQIAGSM-----------KFAFGVQNKLEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I         D     T Q++  +  +  + + +  ++S   +     +   
Sbjct: 50  DIPKGTSVIAMEFRPGKPDPSPIETIQQQTSEMTQQMLEFQAGDEESAGGRQEQRGNKRG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G                E+                ++++ +L KKI+  L   + D    
Sbjct: 110 G----------------ESQSTAKSEAAASEKTADQEQVNELVKKIAQQLEEQIQDGA-- 151

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E+    I+I I +      F   S+   P+   ++QKI ++L      I++ GHTD
Sbjct: 152 -IELESLGQQIIIRIREN---GSFPSGSAFLQPQFKPIIQKIADLLKDVPGEITVSGHTD 207

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS-- 329
                N    +NW LS  R+ +    + K SG  ++R+  + G A  R  + ++   S  
Sbjct: 208 DYQVSNELYFNNWDLSAKRSVAVASEMQKVSGFDKNRMV-VIGHADTRPLVPNEDSESRK 266

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 267 RNRRVEISIMQGK 279


>gi|153836044|ref|ZP_01988711.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
 gi|149750798|gb|EDM61543.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
          Length = 330

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E N
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                                     ++
Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  +    T  + I GHTDA PF+     + NW LS  RA  A + L++ G+ +DR
Sbjct: 185 LLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275


>gi|91793918|ref|YP_563569.1| flagellar motor protein MotB [Shewanella denitrificans OS217]
 gi|91715920|gb|ABE55846.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 318

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 115/325 (35%), Gaps = 36/325 (11%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P     W   +AD M++LM FF+++      D    K I               K
Sbjct: 5   KCVCPPVGAPLWLATFADLMSLLMCFFVLLLSFAEMDVMKFKQIAGSM-----------K 53

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I         D        ++  +  +  I Y +    S 
Sbjct: 54  YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTQQTIEYQAGEDDSA 113

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                   +   G+    + +  ++   E +                ++ + +  KK++ 
Sbjct: 114 GGVQKQQGEQRGGEASATAQETAEAKKSESSSS--------------QENINEQVKKMAE 159

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L+  + D     +  E+    I+I I ++     F   S    P+   V++ IG +L  
Sbjct: 160 QLNEEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPKFKPVIRSIGSLLKD 213

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              +I++ GHTD     N     NW LS  RA +     M+  G  E R+  + G A + 
Sbjct: 214 VPGIITVAGHTDGMHISNELYSSNWDLSSARAVAVAHEFMRVPGFDETRMK-VVGMASND 272

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
             ++++     S NRR++I +E  +
Sbjct: 273 QLVSNESSENRSQNRRVEITIEQGK 297


>gi|146305234|ref|YP_001185699.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145573435|gb|ABP82967.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 313

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 122/344 (35%), Gaps = 63/344 (18%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G +  E    II+K++        + G+WK+ +ADF   +MA F+V+WII   +  
Sbjct: 1   MRKRGGEEHE----IIVKRRSKKGGHDEHGGAWKVAFADFTMAMMALFMVLWIIQPQNQQ 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             +A                 GIFD  +                      V +       
Sbjct: 57  QSRADADQLTNPLV---EGGAGIFDGSSRTPLDLDG------------VPVQVSPRKDRD 101

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
            +     E+    L   Q  E  +       +  +       L   ++ E N        
Sbjct: 102 NQARTPQEDPGATLGEGQPGEPRRPHYAEPGQMQELAELLEQLALQLDAEAN-------- 153

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                                             +  +    G+ I I D     MF + 
Sbjct: 154 ----------------------------------IEVQVVPQGLRILIKDDAQRFMFSRG 179

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298
           S+   P    +LQ++  +LA     + I GHTD++P+R      +NW LS DRA  A  V
Sbjct: 180 SARLDPHFEKLLQRLAGILAKVDNHLIISGHTDSTPYRGVVGGYNNWNLSGDRALRARNV 239

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L+++G+    + +++  A     + SDP N ANRRI++L+   Q
Sbjct: 240 LVEAGLPTSAVLQVTAQADGMPLLPSDPQNGANRRIELLLLTSQ 283


>gi|28901412|ref|NP_801067.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362966|ref|ZP_05775835.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
 gi|260880253|ref|ZP_05892608.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
 gi|260895370|ref|ZP_05903866.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
 gi|1346409|sp|Q03478|LAFU_VIBPA RecName: Full=Chemotaxis protein LafU
 gi|677910|gb|AAA62355.1| LafU [Vibrio parahaemolyticus]
 gi|1518954|gb|AAB07358.1| lateral flagellar MotB [Vibrio parahaemolyticus]
 gi|28809959|dbj|BAC62900.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085707|gb|EFO35402.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
 gi|308092138|gb|EFO41833.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
 gi|308111945|gb|EFO49485.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
          Length = 330

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E N
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                                     ++
Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  +    T  + I GHTDA PF+     + NW LS  RA  A + L++ G+ +DR
Sbjct: 185 LLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275


>gi|148359858|ref|YP_001251065.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
 gi|296107908|ref|YP_003619609.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
 gi|148281631|gb|ABQ55719.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
 gi|295649810|gb|ADG25657.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
          Length = 312

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 63/331 (19%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II  +K+  +D  ++ GSWKI YADF+T +MAFFL+MW++ + +   K  I +YF    
Sbjct: 32  PII--RKIKKNDHKHHGGSWKIAYADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKQPM 89

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           K  +   + + + +   +    N  D       T   +  +  + ++             
Sbjct: 90  KMALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                                                E   L  L  E  L+M++   L 
Sbjct: 137 -----------------------------EIVESQANEIKKLEELKSEINLSMEKDPSLA 167

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L K++                L +    G+ I +ID +  PMFD  S    PE   +L 
Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            I ++L      I+I+GHTDA+P+ N       NW LS  RA +A + L+K+G+ E+++ 
Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++G++   L    +P N  NRRI I+V  +
Sbjct: 272 TVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302


>gi|83858208|ref|ZP_00951730.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853031|gb|EAP90883.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633]
          Length = 303

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 86/332 (25%), Positives = 139/332 (41%), Gaps = 42/332 (12%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            +DQ I+IKK        ++ G+WK+ YADF+T +MAFFL+MW+IN T+ + ++ I  YF
Sbjct: 2   SSDQPIVIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLMMWLINNTEPEQRQGIADYF 61

Query: 70  NPFGKNLMT-ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
            P   +  T  S G+    +  +  ++     SI E +   S           +      
Sbjct: 62  APASVSRTTSGSGGVLGGTSFGDDGARGSGSSSIVERLAPRSEQDVSREQEADQ------ 115

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                 +  G+    S  L  ++ + E        +    A++ 
Sbjct: 116 -------------------ASGAAGGQPEASSDALASAVARREAAQFASAEQSLRQALQD 156

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L +L                 + VL E T  G+ I +IDQ   PMF+  +  P    
Sbjct: 157 MPELAEL----------------SRHVLIEETPEGLRIQLIDQEGRPMFEPGAIEPNSRA 200

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            V+L+ I E++      I+I GHTDASP       NW LS  RA +A  ++ ++G+ + R
Sbjct: 201 RVLLRTISEIVLRLPNRITISGHTDASPAPVGGVSNWELSSARANAALNIMTEAGIPDHR 260

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           I+++ G A        DP    NRR+ I +  
Sbjct: 261 IAEVRGKAGAEPLFPDDPYLPGNRRLSITLLR 292


>gi|320321894|gb|EFW77990.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331001|gb|EFW86975.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330872240|gb|EGH06389.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 341

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDYENPTNPVNRRIDIVVLTKK 273


>gi|257482421|ref|ZP_05636462.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331009754|gb|EGH89810.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 341

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|330984570|gb|EGH82673.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 344

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|298484924|ref|ZP_07003023.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160611|gb|EFI01633.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 341

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|289648637|ref|ZP_06479980.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 350

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|289623746|ref|ZP_06456700.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330865884|gb|EGH00593.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 344

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|121611336|ref|YP_999143.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121555976|gb|ABM60125.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 327

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 131/340 (38%), Gaps = 67/340 (19%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q II+++         ++G+WKI YADF+T +MAFFL++W++ +T     + I  Y
Sbjct: 10  EKKLQPIIVRRVHRAAPAG-HMGTWKIAYADFVTAMMAFFLLLWLLGSTAKGDLQEIAAY 68

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       M  + G             + +  +  E +TK     +        Q +   
Sbjct: 69  FAAPLGASMVGTDGA---------GRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGL 119

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +                                       +++   +  L  +    M  
Sbjct: 120 D-----------------------------------AEYARQDRQRIEALRAKFDALMAS 144

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL +   +I                    T  G+ I IID++N PMFD  S+  LP  
Sbjct: 145 NPRLNEYRSQIR----------------IRITPDGLQIQIIDEQNRPMFDSGSARVLPHM 188

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFR------NIARDNWRLSLDRAYSAYQVLMKS 302
             +L  IG  L      IS+ GHTDA P+            NW LS DRA ++ + L+ +
Sbjct: 189 RDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANASRRELVSA 248

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           G+ +D++ ++ G A        DP+  ANRRI I V   +
Sbjct: 249 GMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHE 288


>gi|330886588|gb|EGH20249.1| flagellar motor protein MotB [Pseudomonas syringae pv. mori str.
           301020]
          Length = 341

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|54298209|ref|YP_124578.1| flagellar motor protein MotB [Legionella pneumophila str. Paris]
 gi|53751994|emb|CAH13420.1| hypothetical protein lpp2267 [Legionella pneumophila str. Paris]
          Length = 312

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 82/334 (24%), Positives = 138/334 (41%), Gaps = 63/334 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
               II  +K+  +D  ++ GSWKI +ADF+T +MAFFL+MW++ + +   K  I +YF 
Sbjct: 29  QYTPII--RKIKKNDHKHHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFK 86

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +   + + + +   +    N  D       T   +  +  + ++          
Sbjct: 87  QPMKVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK---------- 136

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                   E   L  L  E  L+M++  
Sbjct: 137 --------------------------------EIIESQANEIKKLEELKSEINLSMEKDP 164

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L  L K++                L +    G+ I +ID +  PMFD  S    PE   
Sbjct: 165 SLAGLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEP 208

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +L  I ++L      I+I+GHTDA+P+ N       NW LS  RA +A + L+K+G+ E+
Sbjct: 209 ILANIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDEN 268

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  ++G++   L    +P N  NRRI I+V  +
Sbjct: 269 KVMTVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302


>gi|157959885|ref|YP_001499919.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157844885|gb|ABV85384.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 336

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 44/329 (13%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + IIIK+K        + G+WK+ +ADF   +MAFF+V+WII   D   +  I ++  
Sbjct: 4   RPEPIIIKRKRRGKPRKGHAGAWKVAFADFTLAMMAFFMVLWIIQIADQQERTVIAKHIQ 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
             G      S   FD  + P         L  +  +T     L   S+    +   L N 
Sbjct: 64  --GDLFEAGSINPFDLSSSPS-------MLDFEGQMTIQEPVLPTSSSGAGTRGPALHNR 114

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I    N+ ++                                   P L+       + + 
Sbjct: 115 IPEGENNAKAGKG--------------------------------PELNAMLPGKFETQA 142

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ LA++I   +  +    +   V  +    G+ I + D  N  MF + SS   P    
Sbjct: 143 QLEVLAREIDRVIEDVS---MSANVKLQVVPQGVRILMHDNINKFMFTRGSSEMKPYFED 199

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +G VL+     +SI GHTD++PF      NW LS  RA  A +VL  +GV  +++ 
Sbjct: 200 LLMALGPVLSKVENKMSISGHTDSTPFIGKTFTNWELSSKRALLARRVLGYAGVKNNQVL 259

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++G A     I+ DP  +ANRRI++++ 
Sbjct: 260 QVTGMADQAPYISHDPAAAANRRIEMIIM 288


>gi|90408165|ref|ZP_01216333.1| flagellar motor protein [Psychromonas sp. CNPT3]
 gi|90310695|gb|EAS38812.1| flagellar motor protein [Psychromonas sp. CNPT3]
          Length = 299

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 114/323 (35%), Gaps = 43/323 (13%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
               P  L +W   +AD M++LM FF+++   +  D    K I               K 
Sbjct: 6   CKCPPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 54

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q+  E     K    I +  T    D        +K  +  E  + +         
Sbjct: 55  AFGVQSMLEVKDIPKGTSVIAQEFTPGRPDPTPIEVIMQKTIEMTEAKLDFSEGD----- 109

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              S   D E+        +  +   +            K +A + +  +Q+ A +I S 
Sbjct: 110 ---SSRADGEEDSKEDIPEEGNQGNEQSSEASEAQHQLAKAVAQELQDEIQEGAIEIESL 166

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                                ++I I ++     F   S+   P    V++K+ ++LA  
Sbjct: 167 GQQ------------------LIIRIREK---GAFPSGSAFLQPRFRPVIRKVAKILADI 205

Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
             VI+I GHTD     +   R NW LS  RA S    ++K     ++   ++G+A+ +  
Sbjct: 206 PGVITISGHTDNEQVHSELYRSNWDLSAQRAVSVAHEMLKIKKIRNKHLVVAGYANSKPL 265

Query: 322 IASD--PMNSANRRIDILVEDRQ 342
             S        NRR++I++   +
Sbjct: 266 TDSKILSERKRNRRVEIMIMQGE 288


>gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143]
 gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143]
          Length = 366

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 122/342 (35%), Gaps = 71/342 (20%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
            +    +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +     
Sbjct: 54  DNRGSMKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKEL 113

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
             I +YF       +T    I + ++P      +      + +   N  +LK        
Sbjct: 114 IQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------- 165

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                                                         + E   L  L  + 
Sbjct: 166 ---------------------------------------------KRMEQSRLRKLRGDL 180

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              ++   +L+ L   +   L   V + +   ++                  PMF   S+
Sbjct: 181 DQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN-------------RPMFRTGSA 224

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300
              P    +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM
Sbjct: 225 DVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELM 284

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             G+   ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 285 VGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 326


>gi|71737470|ref|YP_272857.1| flagellar motor protein MotB [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71558023|gb|AAZ37234.1| motility protein, MotA family [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 341

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|190572619|ref|YP_001970464.1| flagellar motor protein MotB [Stenotrophomonas maltophilia K279a]
 gi|190010541|emb|CAQ44150.1| putative chemotaxis protein [Stenotrophomonas maltophilia K279a]
          Length = 312

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 59/334 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN   +I+++        ++ GSWK+ YADF+T +MAFFLV+W++  T+ + + AI +YF
Sbjct: 3   ENKPTVIVRRVKKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMATTNKNDRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                             ++ T        G  +          
Sbjct: 63  RNP--------------------------SPLSGQNATPAPGMAGPGGASTSMIKLGGAT 96

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +I   +++   ++ K ++ +  +                                  + K
Sbjct: 97  DISRGNSNDPFQNQKEAVPQPVD-------------------------------QQQRDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++L+ L K++   +      +     +L + T  G+ I I+D++N PMFD  S+   P T
Sbjct: 126 QQLEALMKELQEAISRSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L ++ E L H    IS+ GHTD + +       NW LS DRA +A + L+  G+ + 
Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALVDGGLEDS 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +I+++ G +   L   +DP N  NRRI I+V  +
Sbjct: 246 KITRVVGLSSSVLFDKTDPQNPINRRISIVVMTK 279


>gi|328469346|gb|EGF40292.1| chemotaxis LafU protein [Vibrio parahaemolyticus 10329]
          Length = 330

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E N
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                                     ++
Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  +    T  + I GHTDA PF+     + NW LS  RA  A + L++ G+ +DR
Sbjct: 185 LLLALAPLFERVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275


>gi|74311761|ref|YP_310180.1| flagellar motor protein MotB [Shigella sonnei Ss046]
 gi|73855238|gb|AAZ87945.1| MotB [Shigella sonnei Ss046]
          Length = 308

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/336 (23%), Positives = 124/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  DLK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEDLK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   +             ID +N PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQI-------------IDSQNRPMFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRVIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|114330218|ref|YP_746440.1| flagellar motor protein MotB [Nitrosomonas eutropha C91]
 gi|114307232|gb|ABI58475.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
          Length = 314

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 60/319 (18%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ G+WKI YADF+T +MAFFL+MW++ +T    K+ I +YF    K  +    G  D
Sbjct: 20  GQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGISEYFKMPLKVALLGGDGSGD 79

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  +    +                                                 
Sbjct: 80  STSVIKGGGDDLSRRIGQ------------------------------------------ 97

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                           D  K     +         E+    K K R++D      +  S 
Sbjct: 98  ----------MRRSDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIED------AINSN 141

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            V +     +L + T  G+ I I+D++N PMF    +   P T ++L +IG++L      
Sbjct: 142 PVLNKFKSQLLLDITSEGLRIQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNK 201

Query: 266 ISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           IS+ GHTDA+P+ +      NW LS DRA ++ + L+  G++ +++ ++ G +   +   
Sbjct: 202 ISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAGGMNPEKMLRVVGLSSAVMFDK 261

Query: 324 SDPMNSANRRIDILVEDRQ 342
            D  +  NRRI I+V +++
Sbjct: 262 EDSFSPFNRRISIIVMNKK 280


>gi|294339857|emb|CAZ88220.1| putative outer membrane OmpA/MotB protein [Thiomonas sp. 3As]
          Length = 293

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 107/325 (32%), Gaps = 76/325 (23%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q            
Sbjct: 3   RKKAHEEHENHERWLVSYADFITLLFAFFVVMYSISSLNEGKYKVLSQ------------ 50

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                             I     +  T N V +     +                   +
Sbjct: 51  ----------------TMIAAFTGQPTTPNPVQVGQPFNSMPSAIDLPPIPKQQKPEIIE 94

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                                        A + +K LQ +A+KI
Sbjct: 95  PGRGGPG--------------------------------------AKEVQKTLQGVAEKI 116

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            + L+  +       V    T  G++I I D     +F    +   P+   +L +I  VL
Sbjct: 117 QTLLASAIRKG---DVRVRMTPLGVVIDIHDT---VLFASGQAALTPQAQDLLNQIAGVL 170

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + G TD  P        NW LS  RA S  ++ ++ GV  +++    G+  +
Sbjct: 171 QGVAYPIQVNGFTDDRPINTPQFGSNWALSSARAVSVVEMFIEQGVKPEQLVAA-GYGQY 229

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
               ++D     +ANRR+ +++   
Sbjct: 230 HPVESNDTAKGRAANRRVSVVIVSP 254


>gi|260779337|ref|ZP_05888229.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605501|gb|EEX31796.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 330

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 123/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+   +DD   + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  +  
Sbjct: 3   RQEQVVFKRTKTVDDDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLQ 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        I S+  +   +     
Sbjct: 63  SASVFDKSYGNPFDTSQ------SISPIDLAADSSVPSRHDSTHIVSSFFQGDGE----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P            ++
Sbjct: 112 --------------------------------------------GPETDSLIPGTFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           RL  LAK I   +  + A      V    T  G+ I + D     MF +  S   P    
Sbjct: 128 RLAALAKVIKEAVRQISAQG---NVNVTVTPQGLRIVLQDDYKQHMFGRGGSELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTD++ F+     R NW LS  RA +A   L+  G+ ++R
Sbjct: 185 LLLALAPVFKRVENPLIISGHTDSTRFKGHVERRSNWELSASRANAARHTLVAGGMPDER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VLQVTGMSDRALLNGDEPESSENRRIELFIL 275


>gi|16760871|ref|NP_456488.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141437|ref|NP_804779.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213163277|ref|ZP_03348987.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213622329|ref|ZP_03375112.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|25298889|pir||AF0746 motility protein B [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16503168|emb|CAD05673.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137064|gb|AAO68628.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 309

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK                 
Sbjct: 66  PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R              MF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|16765264|ref|NP_460879.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56413159|ref|YP_150234.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62180499|ref|YP_216916.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613518|ref|YP_001587483.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167552438|ref|ZP_02346191.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994228|ref|ZP_02575320.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168238556|ref|ZP_02663614.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168241555|ref|ZP_02666487.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168259799|ref|ZP_02681772.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168462543|ref|ZP_02696474.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820750|ref|ZP_02832750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194444100|ref|YP_002041189.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450845|ref|YP_002045977.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194472145|ref|ZP_03078129.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737421|ref|YP_002114959.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248088|ref|YP_002146098.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264977|ref|ZP_03165051.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362085|ref|YP_002141722.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243979|ref|YP_002215160.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200390054|ref|ZP_03216665.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204931026|ref|ZP_03221852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352375|ref|YP_002226176.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856557|ref|YP_002243208.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224583574|ref|YP_002637372.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238912501|ref|ZP_04656338.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|2494511|sp|P55892|MOTB_SALTY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|1764128|gb|AAC45266.1| MotB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420459|gb|AAL20838.1| enables flagellar motor rotation [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56127416|gb|AAV76922.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62128132|gb|AAX65835.1| enables flagellar motor rotation, linking torque machinery to cell
           wall [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161362882|gb|ABX66650.1| hypothetical protein SPAB_01238 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402763|gb|ACF62985.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409149|gb|ACF69368.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458509|gb|EDX47348.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712923|gb|ACF92144.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195634203|gb|EDX52555.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197093562|emb|CAR59024.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211791|gb|ACH49188.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243232|gb|EDY25852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197288646|gb|EDY28021.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197938495|gb|ACH75828.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602499|gb|EDZ01045.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204320070|gb|EDZ05275.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272156|emb|CAR37011.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322895|gb|EDZ10734.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205327891|gb|EDZ14655.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205339183|gb|EDZ25947.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342679|gb|EDZ29443.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205350979|gb|EDZ37610.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708360|emb|CAR32664.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468101|gb|ACN45931.1| flagellar motor protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247092|emb|CBG24913.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267993909|gb|ACY88794.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158442|emb|CBW17951.1| motility protein B [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912916|dbj|BAJ36890.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320085458|emb|CBY95239.1| Chemotaxis protein motB Motility protein B [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224566|gb|EFX49629.1| Flagellar motor rotation protein MotB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616922|gb|EFY13830.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618161|gb|EFY15053.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625831|gb|EFY22650.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626283|gb|EFY23093.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632697|gb|EFY29442.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639041|gb|EFY35734.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640481|gb|EFY37134.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646010|gb|EFY42527.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322655476|gb|EFY51784.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660255|gb|EFY56493.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322668121|gb|EFY64280.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674119|gb|EFY70213.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675527|gb|EFY71601.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683059|gb|EFY79075.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686753|gb|EFY82731.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322714975|gb|EFZ06546.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323130206|gb|ADX17636.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195356|gb|EFZ80536.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199248|gb|EFZ84343.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204163|gb|EFZ89175.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323211878|gb|EFZ96707.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217488|gb|EGA02207.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221977|gb|EGA06366.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323231510|gb|EGA15623.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235952|gb|EGA20031.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240522|gb|EGA24565.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245414|gb|EGA29414.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250185|gb|EGA34077.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253633|gb|EGA37461.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258567|gb|EGA42233.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259386|gb|EGA43023.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266189|gb|EGA49679.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|326622909|gb|EGE29254.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627426|gb|EGE33769.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332988815|gb|AEF07798.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 309

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK                 
Sbjct: 66  PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R              MF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|254228819|ref|ZP_04922242.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262396462|ref|YP_003288315.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
 gi|151938766|gb|EDN57601.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262340056|gb|ACY53850.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
          Length = 330

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 122/331 (36%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHSHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +         
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFRGDGD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P +          ++
Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLAALAKVIERMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTDA PF+     + NW LS  RA  A   L++ G+ +DR
Sbjct: 185 LLLALAPVFQRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ V 
Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFVL 275


>gi|90022860|ref|YP_528687.1| flagellar motor protein MotB [Saccharophagus degradans 2-40]
 gi|89952460|gb|ABD82475.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 329

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 113/322 (35%), Gaps = 47/322 (14%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           D P  L  W   +AD M++LM FF+++   +  D    K +                  F
Sbjct: 10  DCPAGLPPWMGTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------F 58

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN    +   K    I +  +    +    +   +K     E ++      +      
Sbjct: 59  GVQNKLNVTDIPKGTSIIAQEFSPGRPEPTPINEIWQKTDDLTEMSLEVQCAEEY----- 113

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                D E+G +   +    K   K E            LA    +++ +   +I +   
Sbjct: 114 -----DIEQGTEGYDAGAALKVKQKLEELLEDTQDDAYELAAAMHEQITEGQIEIETRGR 168

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            ++                        R    F   S+    E   VL+++  VLA    
Sbjct: 169 MIIIR---------------------IREKGSFVSGSADLSVELKDVLKEVKSVLALRQG 207

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            I ++GHTD  P R+     NW LS  R+ S    LM  G   +R  +++G+A     + 
Sbjct: 208 KIEVQGHTDNVPIRSARFGSNWALSSARSVSVAHELMAGGDIAERRFEVAGYADTMPIVP 267

Query: 324 SDPM--NSANRRIDILVEDRQG 343
           +D     + NRR++IL+  +QG
Sbjct: 268 NDSAENRAINRRVEILI--KQG 287


>gi|52842529|ref|YP_096328.1| flagellar motor protein MotB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629640|gb|AAU28381.1| chemotaxis (motility protein B) transmembrane [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 312

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 63/331 (19%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II  +K+  +D  ++ GSWKI +ADF+T +MAFFL+MW++ + +   K  I +YF    
Sbjct: 32  PII--RKIKKNDHKHHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKQPM 89

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           K  +   + + + +   +    N  D       T   +  +  + ++             
Sbjct: 90  KVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                                                E   L  L  E  L+M++   L 
Sbjct: 137 -----------------------------EIVESQANEIKKLEELKSEINLSMEKDPSLA 167

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L K++                L +    G+ I +ID +  PMFD  S    PE   +L 
Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            I ++L      I+I+GHTDA+P+ N       NW LS  RA +A + L+K+G+ E+++ 
Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++G++   L    +P N  NRRI I+V  +
Sbjct: 272 TVTGYSSTILLDKKNPYNPENRRISIIVMKK 302


>gi|300717114|ref|YP_003741917.1| flagellar motor protein [Erwinia billingiae Eb661]
 gi|299062950|emb|CAX60070.1| Flagellar motor protein [Erwinia billingiae Eb661]
          Length = 346

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/334 (22%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N+  II+ KK          GSWKI YADFMT +MAFF+VMW+++  +      I  Y
Sbjct: 2   KHNNHPIILVKKKKHKRHEGGHGSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T      +  +      ++    S + H                       
Sbjct: 62  FKTPLKVALTGGSKSSESISVIPGGGEDPTQKSGEVH----------------------- 98

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                         K  D++    K +   L  L ++    ++ 
Sbjct: 99  ------------------------------KVVDMDAQKRKLDEIRLNRLREKLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL+ L   +   +  +V + +              I IID  N PMF    +   P  
Sbjct: 129 DPRLKALRPHL---IINMVEEGLR-------------IQIIDSENRPMFKTGRAEVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  +L      IS+ GHTD   + N      NW LS DRA ++ + L+  G+  
Sbjct: 173 RDILRAIAPILNDIPNKISLAGHTDDFQYANGDRGYSNWELSADRANASRRELVTGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            ++ ++ G A           ++ NRRI +LV +
Sbjct: 233 GKMLRVVGMADTMSLKNRGADDAVNRRISLLVLN 266


>gi|89073143|ref|ZP_01159682.1| flagellar motor protein [Photobacterium sp. SKA34]
 gi|89051096|gb|EAR56553.1| flagellar motor protein [Photobacterium sp. SKA34]
          Length = 307

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 39/322 (12%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
                   W   +AD  T+LM FF+++   +  D    K I               K  F
Sbjct: 7   KCKKGAPPWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAF 55

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             QN  E +   K    I +       +        ++     + ++ +           
Sbjct: 56  GVQNMLEVNDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRSLDFHEGESDRAGGT 115

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                    G+    +T                    +    +  +  + L + ++  L 
Sbjct: 116 QRDAGKLTGGQSKKTATQNN-----------------ENDESEADQMQEKLKEVLTKALE 158

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             ++D     +  E     ++I I ++     F + S+   P+   +++++  ++     
Sbjct: 159 REISDK---IIEIENLGQQLVIRIREK---GSFPEGSAFLQPKFKPLVRQVAMLVKDVPG 212

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           +I + GHT +    +   R NW LS  RA S  Q + K  G    ++ ++ G A  +   
Sbjct: 213 IIRVTGHTASDKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKM-RVIGLADTQPIA 271

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      + NRR++I +   +
Sbjct: 272 DNKTQDGKAKNRRVEISIIQGK 293


>gi|89072298|ref|ZP_01158877.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
 gi|89051830|gb|EAR57282.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
          Length = 331

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/331 (22%), Positives = 126/331 (38%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N + I+ K+ V       + G+WK+ +ADFM  LMA FLV+W++   D+  + AI  YFN
Sbjct: 3   NTEQIVFKRAVKRHSHQQHGGAWKVAFADFMIALMALFLVLWLLQVVDEKERTAIVAYFN 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                            +  +  S N  D                               
Sbjct: 63  ---------------NSSVFDEGSGNPFDT------------------------------ 77

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                     ++  + +    +      ++  +        N   P        + + ++
Sbjct: 78  ----------DNSPSPIDFGGDAADMSAQNAAMTMKSIYNGNGNGPESDALIPGSFETQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LA  +  T   + A      +  + T  G+ +++ D     MF + ++   P    
Sbjct: 128 QLSILASVVEETAKQVSAQG---NIAIDITPQGLRVTLQDDFKQNMFHRGNANLTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           VL  I  +    +  I I GHTDA+ F+N    + NW LS  RA  A Q L+  G+  DR
Sbjct: 185 VLLTIAPIFKQISNSIIISGHTDATQFKNRFSRQTNWELSSSRANVARQTLISGGMPSDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G A   L    DP  S NRRI++ V 
Sbjct: 245 VLQVAGMAERALLNKQDPSASENRRIELFVL 275


>gi|260776526|ref|ZP_05885421.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607749|gb|EEX34014.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 300

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 106/312 (33%), Gaps = 29/312 (9%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I               K  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +        ++     +  + +                    
Sbjct: 50  DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQRDKGKQTG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           GK    ST         ++        E+  + +  + L+ L + I   L   +      
Sbjct: 110 GKSPDTST---------QDSQNSESDSEQQQSAELSQELETLMESIKKALEREIEQGA-- 158

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E     I I I ++     F + S+   P+   ++++I E++     ++ + GHTD
Sbjct: 159 -IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGIVRVSGHTD 214

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
                +   R NW LS  RA S  Q + K      +  ++ G A  +    +D     S 
Sbjct: 215 NQRIDSELYRSNWDLSAQRAVSVAQEMEKVRDFSHQRLQVRGMADTQPLGPNDTEAQRSR 274

Query: 331 NRRIDILVEDRQ 342
           NRR++I +   +
Sbjct: 275 NRRVEISIMQGE 286


>gi|187920655|ref|YP_001889687.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187719093|gb|ACD20316.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 329

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 63/343 (18%)

Query: 2   NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
            S   + ++    +I+++ +   D   ++ G+WKI YADF+T +MAFFL+MW++ +T   
Sbjct: 5   RSRASREEQAPAPVIVRRSRKGGDHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKF 64

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            K+ IE YFN    +L+  ++G    +    +     I  +      K+  +        
Sbjct: 65  DKQGIEDYFNTPLSSLLGGNEGTTAARPSVVQGGGRDISDTRPAVGKKSQSEPTP----- 119

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                                                        S+   +   L  L  
Sbjct: 120 ---------------------------------------PAVTTPSVAPSDATRLEQLKA 140

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +    +++   L+    +I                    T  G+ I I+D +N PMF   
Sbjct: 141 KLTALIEQSPILKAFKDQIR----------------ISITNEGLRIEIVDSQNRPMFPSG 184

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           SS   P  + +L +IG  L      +SI GHTDA P+        NW LS +RA +A + 
Sbjct: 185 SSKLQPYAVTILTQIGAALNDVDNRVSIAGHTDAVPYTAGPEGYSNWELSSERANAARRS 244

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+  +++ ++ G A      +       NRRI ILV ++
Sbjct: 245 LVAGGMHGEKLLQVRGLADVLPLNSQVADEPTNRRISILVLNK 287


>gi|161502956|ref|YP_001570068.1| flagellar motor protein MotB [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864303|gb|ABX20926.1| hypothetical protein SARI_01018 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 309

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       + +YF  
Sbjct: 6   HPIVVVKRRKHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQLAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK                 
Sbjct: 66  PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R              MF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|261212057|ref|ZP_05926343.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
 gi|260838665|gb|EEX65316.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
          Length = 304

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 106/312 (33%), Gaps = 31/312 (9%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W   +AD M++LM FF+++   +  D    K I               K  F  QN  E 
Sbjct: 2   WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEV 50

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
               K    I +       +        ++     +  + +              +    
Sbjct: 51  KDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLT 110

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
            G+    S    ++   E          E         +++ +A+ I   LS  +     
Sbjct: 111 GGQSAETSVQENQNTQSEMQQQQAQAMSE---------QMETVAESIKKALSREIEQGA- 160

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             +  E     I I I ++     F + S+   P+   ++++I +++      + + GHT
Sbjct: 161 --IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHT 215

Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330
           D     +   R NW LS  RA S  Q + K  G    R+ ++ G A  +    +D     
Sbjct: 216 DNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADTQPLGPNDTEAQR 274

Query: 331 --NRRIDILVED 340
             NRR++I +  
Sbjct: 275 TINRRVEISILQ 286


>gi|104783884|ref|YP_610382.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
 gi|95112871|emb|CAK17599.1| putative flagellar motor MotB protein [Pseudomonas entomophila L48]
          Length = 341

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/334 (23%), Positives = 127/334 (38%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIVKRVKRFG-DGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   + +  I D                        S  L    T   +       
Sbjct: 61  KDPIGFSESGTPYIIDLG---------------------GSPQLAPEKTINPETKSEPTP 99

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +     +  Q E     + R+  +                                    
Sbjct: 100 DTSIQLDKDQVETMAEQVERERLELLLQELQ----------------------------- 130

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                     +              +LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 131 ----------NKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRENPFNPVNRRIDIIVLTKK 274


>gi|330821029|ref|YP_004349891.1| OmpA/MotB [Burkholderia gladioli BSR3]
 gi|327373024|gb|AEA64379.1| OmpA/MotB [Burkholderia gladioli BSR3]
          Length = 307

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 67/330 (20%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
            ++++        ++ G+WKI YADF+T +MAFFL+MW++ +T    +K IE YFN    
Sbjct: 19  TVVRRVRKNAHEGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKYDRKGIEDYFNTPLS 78

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L+                         D + T  S  L+ G  +   +           
Sbjct: 79  TLLGTHA---------------------DSNGTARSSVLQAGGQDLSDRRD--------- 108

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                              G     S     +++ E+   L  L ++    ++   +L+ 
Sbjct: 109 -------------------GNGHAASAPAAPAVDAEDAARLSRLRQQLSTLVEENPQLRA 149

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +I                   TTR G+ I I+D R+ PMF   S+        +L +
Sbjct: 150 FKDQIR----------------LSTTREGLRIEIVDSRSRPMFATGSARLEDYASDILFR 193

Query: 255 IGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           IG +L      +SI GHTDA P+        NW LS DRA +A + L+   + ED++ +I
Sbjct: 194 IGTLLNQVDNRVSIAGHTDAVPYSGGIAGYSNWELSSDRANAARRALVAGHLREDKLLQI 253

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            G A              NRRI ILV ++Q
Sbjct: 254 RGLADVLPLDQGAADAEVNRRISILVLNKQ 283


>gi|327398736|ref|YP_004339605.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
 gi|327181365|gb|AEA33546.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
          Length = 287

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 79/332 (23%), Positives = 117/332 (35%), Gaps = 48/332 (14%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +EN +  I+KK            +W++ Y DFMT +MAFFLVMW+I AT+   +K +  Y
Sbjct: 3   EENQEGGIVKKCKKCKCEEGGGSAWEVAYGDFMTSMMAFFLVMWLIAATNVKQRKVLSTY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F   G   +T    +   +   +  S++         +   SV                 
Sbjct: 63  FTQPGATSLTEGSSMLPSKGVFDIGSRSLTVSQRIPEMPLPSV----------------- 105

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L         + + 
Sbjct: 106 -------------------------------QPQKTLKGRGLIPKVLRKSGGGIGQSKQT 134

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                 + K      S          +  E T  G+ I I D+   PMF   S    P  
Sbjct: 135 MNLYNIMKKIQQVIASKKELLQYRNQIKMEITEEGLRIVIFDKNKRPMFYPGSDKLEPWA 194

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             VL  + + LA  +  I+I GHTDA+P+      NW LS  RA +A + +  +GVS  R
Sbjct: 195 KEVLDIVAKQLADISNKITIEGHTDANPYVIGGLSNWDLSTMRANAARREIQTNGVSVSR 254

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
              I G+   R    +DP +  NRRI ILV+ 
Sbjct: 255 FDSIVGYGDTRPVPGTDPKDPINRRIVILVKK 286


>gi|296531741|ref|ZP_06894566.1| chemotaxis MotB protein [Roseomonas cervicalis ATCC 49957]
 gi|296267924|gb|EFH13726.1| chemotaxis MotB protein [Roseomonas cervicalis ATCC 49957]
          Length = 309

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 127/335 (37%), Gaps = 49/335 (14%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +    + +IIKK    +    + G WKI YADF+T +MAFFLVMW++++T +  ++ I 
Sbjct: 4   ADDHLKRPVIIKKH-HGEHDDEHGGQWKIAYADFVTAMMAFFLVMWLLSSTTESQREGIA 62

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           Q+F       + +  G  D       +  N+ D            D + G +       +
Sbjct: 63  QFFTASSILDLPSGSGTLDGGRSVLLAGDNRQDALTQVDDGGARQDSQGGESANDGAAAQ 122

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                                       
Sbjct: 123 AAPQQQDAVRDPI----------------------------------------------- 135

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             ++R   L  ++   +         + +  E T  G+ + I D+   PMF  +++ P P
Sbjct: 136 -ERQRFDALKAELERQMQTDALREFSQNIQLEMTPEGLRLQIFDRDGQPMFAPAATEPTP 194

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
               +L+ +G VLA     + + GHTDA PF+     NW LS DRA +A + L +SGV  
Sbjct: 195 RLARILEVVGSVLASVPNEVVVSGHTDAQPFQRGNYSNWELSADRANAARRALERSGVRP 254

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            R+ ++   A     +A +P +  NRRI + V   
Sbjct: 255 ARMFRVEAKAAVEPLLAEEPNDPRNRRIAVTVLRS 289


>gi|21231338|ref|NP_637255.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768610|ref|YP_243372.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21112997|gb|AAM41179.1| MotB protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573942|gb|AAY49352.1| MotB protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 324

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                       +K +  +++G+T                  S 
Sbjct: 58  -------------------------GGSSKAASPVQLGNT-----------------QSL 75

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  +A++
Sbjct: 76  GADYDRPSVIKAGAPMAASNGPTDPTILPSMAAQMRMPVSLRNQAQLARAQRQMDAVAQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++ TLS L+   +   +        I + I       +F   S++        L  +  V
Sbjct: 136 LNKTLSPLIDKQL---ITIRRRDLWIEVEINSD---ILFVTGSALLAGSARGTLSTLAAV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADEGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|188991572|ref|YP_001903582.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733332|emb|CAP51531.1| motB1 [Xanthomonas campestris pv. campestris]
          Length = 324

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEDHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                       +K +  +++G+T                  S 
Sbjct: 58  -------------------------GGSSKAASPVQLGNT-----------------QSL 75

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  +A++
Sbjct: 76  GADYDRPSVIKAGAPMAASNGPTDPTILPSMAAQMRMPVSLRNQAQLARAQRQMDAVAQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++ TLS L+   +   +        I + I       +F   S++        L  +  V
Sbjct: 136 LNKTLSPLIDKQL---ITIRRRDLWIEVEINSD---ILFVTGSALLAGSARGTLSTLAAV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADEGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|332992377|gb|AEF02432.1| flagellar motor protein MotB [Alteromonas sp. SN2]
          Length = 309

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/322 (19%), Positives = 109/322 (33%), Gaps = 39/322 (12%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P  L +W   +AD M++LM FF+++   +  D    K I               K  F 
Sbjct: 10  PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QN  E     K    I         D     T Q++  +  +  + + +  + S   + 
Sbjct: 59  VQNKIEVKDIPKGTSVIAMEFRPGRPDPSPIDTIQQQTIEMTQQMLEFQAGDEDSSGGRQ 118

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               +   G+                       + ++  +  +       A+ +      
Sbjct: 119 KQRGEQRGGQ-------------------SQQTATDQSSSESQSSDQTQTAELMKKVAQQ 159

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L    +   V  E+    + I I +      F   S+   P+   +L+KIG +LA     
Sbjct: 160 LQKQILDGAVELESLGQQLTIRIREN---GSFSAGSAFLQPQFQPILRKIGVLLADVPGE 216

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323
           I I GH+D     N   R NW LS  RA +  + +    G  E R+  + G A     + 
Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRM-SVVGKADTDPMVE 275

Query: 324 SDP---MNSANRRIDILVEDRQ 342
                   + NRR++I +   +
Sbjct: 276 DATTPADRARNRRVEININQGK 297


>gi|255021445|ref|ZP_05293492.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969150|gb|EET26665.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
           ATCC 51756]
          Length = 307

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 75/334 (22%), Positives = 120/334 (35%), Gaps = 64/334 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E  Q I+IK+         + G+WKI YADF+T LMAFFL+MW++ +T   T + I Q+F
Sbjct: 5   EKSQPIVIKRIKKT--AGGHGGAWKIAYADFVTALMAFFLLMWLLGSTTKATLQGIAQWF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               +  +    G     +       N      +    +    +        +     + 
Sbjct: 63  KNPEQVSLMGGPGSGSSNSVLNGGGSNINKTVGEVQRGQKKQSMPTNEAPADRSQTVDQR 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N+  L                                               K   M + 
Sbjct: 123 NLREL-----------------------------------------------KNKLMAQI 135

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K   +LA      L  +  + +   V+             D    PMF   S++  P   
Sbjct: 136 KSNPELAAFRHQLLISITPEGLRIQVV-------------DSSKRPMFANGSTVLEPYAR 182

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            +   I   L      ISI GHTDA  +        N+ LS  RA S  Q+L++SG++E+
Sbjct: 183 TIFSAIAPTLDELPNRISITGHTDALRYLNEGRGYSNFNLSAGRANSVRQILVQSGLAEN 242

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++ ++ G     L +  DP +  NRR+ I+V  R
Sbjct: 243 KVLRVVGMGSAVLFVPKDPDSPLNRRVSIVVLSR 276


>gi|254525153|ref|ZP_05137208.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
 gi|219722744|gb|EED41269.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
          Length = 320

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 133/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +I+++        ++ GSWK+ YADF+T +MAFFLV+W++ +T    + AI +YF
Sbjct: 3   ETKPTVIVRRVKKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMASTSKPERAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             +P    S               S+    G+T+  +       
Sbjct: 63  RNP---------------SPLSGKSATPAPGMAGPGGASTSMIKLGGATDVSRGNSNDPF 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                           + +      + K
Sbjct: 108 ------------------------------------------QNQKEAVPQPLDQQQRDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++L+ L K++   +      +     +L + T  G+ I I+D++N PMFD  S+   P T
Sbjct: 126 QQLEQLMKELQEAISKSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L ++ E L H    IS+ GHTD + +       NW LS DRA +A + L+  G+ + 
Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALIDGGLEDS 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +I+++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KITRVVGLSSSVLFDKADPQNPINRRISIVVM 277


>gi|194364216|ref|YP_002026826.1| flagellar motor protein MotB [Stenotrophomonas maltophilia R551-3]
 gi|194347020|gb|ACF50143.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 318

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +I+++        ++ GSWK+ YADF+T +MAFFLV+W++ +T    + AI +YF
Sbjct: 3   ETKPTVIVRRVRKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMASTSKPERAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             +P   SS               S+    G+T+  +       
Sbjct: 63  RNP---------------SPLVGSSATPAPGMAGPGGASTSMIKLGGATDISRGSSNDPF 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                           + +      + K
Sbjct: 108 ------------------------------------------QNQKEAVPQPVDQQQRDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++L+ L K++   +      +     +L + T  G+ I I+D++N PMFD  S+   P T
Sbjct: 126 QQLEALMKELQEAISRSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L ++ E L H    IS+ GHTD + +       NW LS DRA +A + L+  G+ + 
Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALIDGGLEDS 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +I+++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KITRVVGLSSSVLFDKADPQNPINRRISIVVM 277


>gi|254463728|ref|ZP_05077139.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206684636|gb|EDZ45118.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 282

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 130/332 (39%), Gaps = 58/332 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   IIIK+K       ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K +  Y
Sbjct: 8   QSNVAPIIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 67

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P                 P  R S         + +    +  + G+           
Sbjct: 68  FSP---------------SIPLSRVSGGGNGAFQGDSMFTEDIQPQSGT----------- 101

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                        +  ++     + G +  +  + + S  +     L     E ++++  
Sbjct: 102 --------GATDINPMDAQKAQGDTGVESTEKREEDDSKFRAIEEQLSGRGGESMVSVA- 152

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                                 + + ++   T  G++I +    + P+F++  + P P  
Sbjct: 153 ----------------------MARHIVTRVTDEGLIIELFATEDMPLFEEDQAEPKPLF 190

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++ I  V    T  ++I GH  + P        W LS  RA     +L   G+   R
Sbjct: 191 RDLVRMIARVSDGVTSNVAIGGHIRSHPVVLAKNPVWELSHARADITRTLLESGGLDAGR 250

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + +++G A  +L + + PM + N RI+I+   
Sbjct: 251 VHRVTGHADRKLAVGN-PMAARNDRIEIIFLR 281


>gi|295095518|emb|CBK84608.1| Flagellar motor protein [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 309

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 79/334 (23%), Positives = 124/334 (37%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +I+KK+        + GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 5   SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +T    I +  +P      +      +     N  +LK                
Sbjct: 65  TPLATAVTGGPRISNSDSPIPGGGDDYTQQQGEVKKQPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E   L  L  +    ++   
Sbjct: 109 -------------------------------------KRMEQARLKKLRGDLDQLIEADP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L                   G+ I IID +N PMF   S+   P    
Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSADVEPYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      IS+ GHTD  P+        NW LS DRA ++ + L+  G+ + +
Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A         P ++ NRRI +LV ++Q
Sbjct: 236 VLRVVGMAATMRLTDRGPDDAINRRISLLVLNQQ 269


>gi|213426377|ref|ZP_03359127.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 309

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 118/333 (35%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +L+                 
Sbjct: 66  PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELE----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                  E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KTVEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R               F   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|325923841|ref|ZP_08185450.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
 gi|325545675|gb|EGD16920.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
          Length = 329

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 52/326 (15%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEDHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                                G ++      ++       ++  
Sbjct: 58  -------------------------------------GGSSNAASPVQIGKTQTLGADYD 80

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           +    K  + +           TD     +      +P   + +    + ++++  +A +
Sbjct: 81  RPSVIKAGVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVAAQ 140

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 141 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGTARDTLSTLASV 194

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 195 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 253

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 254 FRARADNSTEAGRNANRRVVLIILAD 279


>gi|186473029|ref|YP_001860371.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184195361|gb|ACC73325.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 327

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/344 (23%), Positives = 129/344 (37%), Gaps = 65/344 (18%)

Query: 2   NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
              G++       +I+++ K       ++ G+WKI YADF+T +MAFFL+MW++ +T   
Sbjct: 5   RPRGEEASAKAAPVIVRRSKKGDGHGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKY 64

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQ-NPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
            K+ IE YFN    +L+  ++G    + N  +   ++  D    +  T      K   T 
Sbjct: 65  DKQGIEDYFNTPLSSLLGGNEGTAAARPNVIQGGGRDISDTRPGDGKTMQQEPAKPTLTQ 124

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                                                                  L  L 
Sbjct: 125 ITTVPNDT---------------------------------------------ARLEQLK 139

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    ++    L+    +I                    T  G+ I I+D    PMF  
Sbjct: 140 SKLSALIEDTPALKAFKDQIR----------------ISITNEGLRIEIVDTLKRPMFAT 183

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297
            SS      + +L +IG  L      ISI GHTDA  + N      NW LS +RA +A +
Sbjct: 184 GSSKLQSYAVEILTRIGAALNDVDNRISIAGHTDAVTYANGPAGYSNWELSSERANAARR 243

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            L+  G+ ED++ ++ G A      A+      NRRI +LV ++
Sbjct: 244 ALVAGGMREDKLLQVRGLADVLPLNANVADEPTNRRISVLVLNK 287


>gi|254509011|ref|ZP_05121116.1| flagellar motor protein [Vibrio parahaemolyticus 16]
 gi|219548046|gb|EED25066.1| flagellar motor protein [Vibrio parahaemolyticus 16]
          Length = 298

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 109/313 (34%), Gaps = 31/313 (9%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I               K  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +        ++     +  + +                    
Sbjct: 50  DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG---------T 100

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            +D  K T  +      +N        ++  + +  + L+ L + I   L   +      
Sbjct: 101 QRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIEQGA-- 158

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E     I I I ++     F + S+   P+   ++++I +++     ++ + GHTD
Sbjct: 159 -IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGIVRVSGHTD 214

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329
                +   R NW LS  RA S  Q + K  G +  R+ ++ G A       +D     S
Sbjct: 215 NQRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTSQRL-RVRGMADTEPLGPNDTEAQRS 273

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 274 RNRRVEISIMQGE 286


>gi|153831776|ref|ZP_01984443.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
 gi|148872286|gb|EDL71103.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
          Length = 330

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A +    + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +         
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P +          ++
Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I   +  + A      V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V    +  + I GHTD++PF+     + NW LS  RA  A   L++ G+ +DR
Sbjct: 185 LLLALAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275


>gi|87121902|ref|ZP_01077787.1| flagellar motor protein [Marinomonas sp. MED121]
 gi|86162700|gb|EAQ63980.1| flagellar motor protein [Marinomonas sp. MED121]
          Length = 304

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 125/327 (38%), Gaps = 60/327 (18%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
            II++   +    ++ G+WKI  ADF   +MAFFLVMWIIN        AI+ YFN    
Sbjct: 7   TIIRRVKKVKKGGHHGGAWKIALADFALAMMAFFLVMWIINVASPQELAAIQGYFNDPKG 66

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                                                 + +G +  K   ++L+ N+   
Sbjct: 67  MSTAGYSN----------------------------NPIDLGGSPAKSTERKLDINLPDP 98

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            + Q+ +  K                                  +      +  +++   
Sbjct: 99  GSVQRPDSVK--------------------------------EDANSHRDQVAEQEQADL 126

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
            A          V + + + +  E T  GI ++++D++N PMF + S   +P+  + +  
Sbjct: 127 AAALGKKFEGEKVFEAVKENLQIEITPDGIRVTLLDKQNKPMFAQGSGRLMPDFELAMVN 186

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           IG+VL+     + + GHTD+S +      NW LS  RA  A ++L + G  + R  ++ G
Sbjct: 187 IGQVLSGLNNKLVVSGHTDSSAYSFAGLGNWELSAMRANEARRLLREGGAGDTRFVQVMG 246

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341
            +       +DP    NRR+ +L+   
Sbjct: 247 LSDTAPYDRTDPAAGINRRVSVLLLTD 273


>gi|296101766|ref|YP_003611912.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056225|gb|ADF60963.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 309

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/334 (23%), Positives = 123/334 (36%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +I+KK+          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 5   SHPIVIVKKRKHKGHGHGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 ++    I +  +P      +      +     N  +LK                
Sbjct: 65  TPLATAVSGGPRISNSDSPIPGGGDDYTQKQGEVKKEPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 K E   L  L  +    ++   
Sbjct: 109 -------------------------------------RKMEQARLKKLRGDLDQLIEADP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L                   G+ I IID +N PMF   S+   P    
Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      IS+ GHTD  P+        NW LS DRA ++ + L+  G+ + +
Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A         P ++ NRRI +LV ++Q
Sbjct: 236 VLRVVGMAATMRVSDRGPDDAINRRISLLVLNQQ 269


>gi|293415204|ref|ZP_06657847.1| chemotaxis protein MotB [Escherichia coli B185]
 gi|291432852|gb|EFF05831.1| chemotaxis protein MotB [Escherichia coli B185]
          Length = 308

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGNRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R             PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|170769416|ref|ZP_02903869.1| chemotaxis protein MotB [Escherichia albertii TW07627]
 gi|170121740|gb|EDS90671.1| chemotaxis protein MotB [Escherichia albertii TW07627]
          Length = 308

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQTHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGNRISNSESPIPGGGDDYTQRRGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   + + +   ++                  PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---LQEGLRIQIIDSQN-------------RPMFKIGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ N      NW LS +RA ++ + L   G+ +
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYANGEKGYSNWELSTERANASRRELAAGGLDD 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 268


>gi|126738556|ref|ZP_01754261.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6]
 gi|126720355|gb|EBA17061.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6]
          Length = 278

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 130/334 (38%), Gaps = 59/334 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   IIIKKK       ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K +  Y
Sbjct: 4   QSNMAPIIIKKKKVSGGDGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+                  P  R S         + +    +  + G+           
Sbjct: 64  FS---------------PSIPLSRVSGGGNGAFQGDSMFTEDIQPQSGT----------- 97

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                      +   +   +      ++      SK + +  + 
Sbjct: 98  ----------------------GATDMNPMDAQQAQGETGVSDSQKAEEDSKLRAIEEQL 135

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R  +    I           + + ++   +  G++I + +     +F+  ++ P P  
Sbjct: 136 QGRGGESMVSIE----------MARHIITRISDEGLIIELFETETAKLFEDGTAEPTPLF 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++ +  V A     +++ GH  + P        W +S  RA +A  +L   G+  +R
Sbjct: 186 RDLVRMVSRVSATVANEVAVSGHIQSQPVVIAQNPVWGVSHQRADAARTLLESGGMKANR 245

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I +++G+A  +L   + PM+  N R++I++   Q
Sbjct: 246 IQRVTGYADRKLAAQN-PMSPRNNRVEIILLREQ 278


>gi|209919315|ref|YP_002293399.1| flagellar motor protein MotB [Escherichia coli SE11]
 gi|218554477|ref|YP_002387390.1| flagellar motor protein MotB [Escherichia coli IAI1]
 gi|209912574|dbj|BAG77648.1| chemotaxis protein MotB [Escherichia coli SE11]
 gi|218361245|emb|CAQ98829.1| protein that enables flagellar motor rotation [Escherichia coli
           IAI1]
 gi|324017971|gb|EGB87190.1| chemotaxis protein MotB [Escherichia coli MS 117-3]
          Length = 308

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R             PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|30248076|ref|NP_840146.1| flagellar motor protein MotB [Nitrosomonas europaea ATCC 19718]
 gi|30179961|emb|CAD83956.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 307

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 127/319 (39%), Gaps = 60/319 (18%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ G+WKI YADF+T +MAFFL+MW++ +T    K+ I +YF    K  +    G  D
Sbjct: 20  GQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGIAEYFKTPLKVALLGGDGSGD 79

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  +    +                                                 
Sbjct: 80  STSVVKGGGDDISKKIGQ------------------------------------------ 97

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                           D  K     +         E     K K R++D      +  S 
Sbjct: 98  ----------MKRSDFDDLKRSIDMDALQALQDRFELEQLEKLKARIED------TINSN 141

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
              +     +L + T  G+ I I+D++N PMF    +     T ++L +IG++L      
Sbjct: 142 PALNKFKSQLLLDITSEGLRIQIVDEKNRPMFSMGRAELQSYTKMILHEIGKMLNDVGNK 201

Query: 266 ISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           IS+ GHTDA+P+        NW LS DRA ++ + L+  G+S +++ ++ G +   +   
Sbjct: 202 ISLSGHTDATPYPTGEKSYSNWELSADRANASRRELIAGGMSPEKMLRVVGLSSAVMFDK 261

Query: 324 SDPMNSANRRIDILVEDRQ 342
           +DP +  NRRI I+V +++
Sbjct: 262 ADPFSPFNRRISIIVMNKK 280


>gi|256022446|ref|ZP_05436311.1| flagellar motor protein MotB [Escherichia sp. 4_1_40B]
 gi|300917528|ref|ZP_07134185.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
 gi|300415233|gb|EFJ98543.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
          Length = 308

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLWKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++                  PMF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQN-------------RPMFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|308187234|ref|YP_003931365.1| Chemotaxis protein motB (Motility protein B) [Pantoea vagans C9-1]
 gi|308057744|gb|ADO09916.1| Chemotaxis protein motB (Motility protein B) [Pantoea vagans C9-1]
          Length = 313

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 72/335 (21%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
              N   ++IKK+       ++ GSWKI YADFMT +MAFF+VMW+++  +      I  
Sbjct: 2   KHGNRPIVLIKKRKHKGHEGSH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIAD 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K  +T      D  +P      +      +                        
Sbjct: 61  YFKTPLKVAITGGARSSDSDSPIPGGGDDPTKKIGE------------------------ 96

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                        + K  D++    K +   L  L ++    ++
Sbjct: 97  -----------------------------VNKVVDMDAQKRKLDEIRLNRLREKLDQMIE 127

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              RL+ L   +   +  +V + +              I IID +N PMF    +   P 
Sbjct: 128 ADPRLKALRPHL---IINMVEEGLR-------------IQIIDSQNRPMFKTGRAEVEPY 171

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L+ I  +L      IS+ GHTD   +        NW LS DRA ++ + L+  G+ 
Sbjct: 172 MRDILRAIAPILNDIPNRISLAGHTDDFQYAGGDKGYSNWELSTDRANASRRELVMGGLD 231

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             ++ ++ G A           ++ NRRI +LV +
Sbjct: 232 SGKVLRVLGMADTMRLKNRGGNDAVNRRISLLVLN 266


>gi|320157195|ref|YP_004189574.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
 gi|319932507|gb|ADV87371.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
          Length = 300

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 110/313 (35%), Gaps = 31/313 (9%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I               K  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +        ++     +  + +                    
Sbjct: 50  DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG---------T 100

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            +D  K T  +      +        +++  +    K ++ L + I   L   +      
Sbjct: 101 QRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKKALEREIEQGA-- 158

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E     I+I + ++     F + S+   P+   ++++I E++     ++ I GHTD
Sbjct: 159 -IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTD 214

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329
                +   R NW LS  RA S  Q + K  G S  R+ ++ G A     + +D     +
Sbjct: 215 NQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRL-RVRGMADTDPLVDNDTEENRA 273

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 274 RNRRVEISIMQGE 286


>gi|269960142|ref|ZP_06174518.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
 gi|269835113|gb|EEZ89196.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
          Length = 330

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A +    + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +         
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P +          ++
Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I   +  + A      V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V    +  + I GHTD++PF+     + NW LS  RA  A   L++ G+ +DR
Sbjct: 185 LLLALAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275


>gi|78047517|ref|YP_363692.1| flagellar motor protein MotD [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035947|emb|CAJ23638.1| flagellar motor protein MotB [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 324

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                    N        K      ++                                 
Sbjct: 58  -----GGSSNKASPVQLGKTQTLGADYDRP------------------------------ 82

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 83  -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGGARGTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    G++  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|312884825|ref|ZP_07744517.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367477|gb|EFP95037.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 331

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 117/331 (35%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  + D    + G+WK+ +ADFM  LMA FLV+WI+   D + +KAI  + +
Sbjct: 3   RQESVVFKRSKSEDHDVVHGGAWKVAFADFMIALMALFLVLWIMQVVDREERKAIMAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +     FD                                ++   ++      
Sbjct: 63  SASVFEKSYG-NPFDTSQSISPIDLAS-------------------ESSVPSRHDLTHTV 102

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
             +           + +  + +                                    ++
Sbjct: 103 NSFFDGDGDGPETDSLIPGNFDT-----------------------------------QE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           RL  LAK I         +     V    T  G+ + + D     MF +  S   P    
Sbjct: 128 RLAALAKVIEEATKQ---NGAQGNVNITVTPQGLRVVLQDDEKQTMFSRGGSKLTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  I  +       I I GHTD+  +++    + NW LS  RA +A   L+++G+  +R
Sbjct: 185 LLVAIAPIFEKVANPIIISGHTDSIRYKSRFNIKSNWELSTSRANAARYTLVQAGMPSER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L     P +S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNPQAPKSSENRRIELFVL 275


>gi|283784104|ref|YP_003363969.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
 gi|282947558|emb|CBG87111.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
          Length = 331

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 52/341 (15%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M    ++     +  II++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKAANRRDRGAKTTIIRRQIKKNHGGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKT 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            ++ I    +                Q+         ++    + I   +    +     
Sbjct: 61  ERENIVAALH---------------GQSIFNGGGLAPLNKIGKQTIVPGASSKSV----- 100

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                                                 K++  ++ +   E         
Sbjct: 101 --------------------------------TRSRPDKASPAKEEVKVSEEVAKKAKDV 128

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            +  A+ +KK   +L +  +S  S     ++   +  E    G+ + I D +N  MF++ 
Sbjct: 129 NEKTALLKKKSATELGELATSIQSIARKAHMETNLEMEIVPQGLRVLIKDDKNRNMFERG 188

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S+  +P    +L ++  V       I I GHTDA  +++   +NW LS DRA SA +VL 
Sbjct: 189 SARIMPFFQSLLTELAPVFDSLDNKIIITGHTDAMAYKSDIYNNWNLSGDRALSARRVLE 248

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 249 QAGMPEDKVMQVSAMADQMLLDAKNPESAGNRRIEIMVLTK 289


>gi|296161288|ref|ZP_06844096.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295888446|gb|EFG68256.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 329

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/343 (22%), Positives = 130/343 (37%), Gaps = 63/343 (18%)

Query: 2   NSHGDKNQENDQFIIIKKKVAIDDTPNNLG-SWKIVYADFMTVLMAFFLVMWIINATDDD 60
           NS   + ++    +I+++    +D   + G +WKI YADF+T +MAFFL+MW++ +T   
Sbjct: 5   NSRASQGEQALAPVIVRRSKKGEDHGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKY 64

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            K                  +GI D  N P  S                           
Sbjct: 65  DK------------------QGIEDYFNTPLSSLIG------------------------ 82

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                           ++ +   + S+ +   +     +  D +KS  +         + 
Sbjct: 83  ---------------GNEGTAAARPSVVQGGGRDISDTRPGDGKKSQTQPTPPATAAPTV 127

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
               A + ++    L   I               +    T  G+ I I+D +N PMF   
Sbjct: 128 APSDAARLEQLKAKLTALIEQ---SPALKAFKDQIRISITNEGLRIEIVDSQNRPMFPSG 184

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           SS   P    +L +IG  L      ISI GHTDA P+        NW LS +RA +A + 
Sbjct: 185 SSKLQPYAETILTQIGAALNDVDNRISIAGHTDAVPYTAGPEGYSNWELSSERANAARRA 244

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+  +++ ++ G A      ++      NRRI ILV ++
Sbjct: 245 LVAGGMHGEKLLQVRGLADVLPLNSNIADEPTNRRISILVLNK 287


>gi|320177401|gb|EFW52402.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
           74-1112]
          Length = 308

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQTHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|330501613|ref|YP_004378482.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
 gi|328915900|gb|AEB56731.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
          Length = 334

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/334 (23%), Positives = 129/334 (38%), Gaps = 61/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI +ADF T +MAFFLVMW+                
Sbjct: 2   ENNQPIIVKRVKKTA-GGHHGGAWKIAFADFATAMMAFFLVMWL---------------- 44

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                      + I      P   +++    +ID   T      +  + +  +  +    
Sbjct: 45  --MSSATPEQKRAISGYFQDPIGFTESASPYAIDLGGTPTPAPERTLNPDVSETPE---- 98

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                   +E        +     M+++
Sbjct: 99  -------------------------------------SQPDETGVSTDQIETLAEKMEQE 121

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L +  +              +LFE T+ G+ I I+D  N PMF   S+   P   
Sbjct: 122 RLELLLQELQNKVEENPELQRFKDQILFEITQDGLRIQIMDAENRPMFALGSAELQPYFE 181

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA PF       NW LS +RA +A + L+  G  +++
Sbjct: 182 DILLAMADTIRAVPNKISISGHTDAKPFAGRGDFGNWELSSNRANAARRTLVAGGYPDEQ 241

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L   +DP N  NRRIDI+V  ++
Sbjct: 242 VARVVGYASSALFDRADPFNPVNRRIDIVVLTKK 275


>gi|310767897|gb|ADP12847.1| Chemotaxis protein [Erwinia sp. Ejp617]
          Length = 343

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N + I++ K+        + GSWKI YADFMT +MAFFLVMW+I+ +       I  Y
Sbjct: 2   KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T  +   D  +P     ++  +   + H                       
Sbjct: 62  FKTPLKVALTGGQRSSDSSSPIPGGGRDPTEKIGEVH----------------------- 98

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                         K  DL+K  +K +   L  L +     ++ 
Sbjct: 99  ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL+ L   +   +  +V + +              I IID +N PMF   S+      
Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  +L      IS+ GHTD  P+        NW LS DRA ++ + L+  G++ 
Sbjct: 173 RDILRAIAPILNQIPNRISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            ++ ++ G +           ++ NRRI +LV +
Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266


>gi|325916150|ref|ZP_08178436.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325537641|gb|EGD09351.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 324

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 116/326 (35%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                       + N+  +++G T                  S 
Sbjct: 58  -------------------------GGSSTNASPVQLGKT-----------------QSL 75

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 76  GADYDRPSVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TLS L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLSPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGGARGTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    G++  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATVQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNTTEAGRNANRRVVLIILAD 274


>gi|292488570|ref|YP_003531454.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430]
 gi|292899741|ref|YP_003539110.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
 gi|291199589|emb|CBJ46706.1| chemotaxis protein [Erwinia amylovora ATCC 49946]
 gi|291554001|emb|CBA21046.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora
           CFBP1430]
 gi|312172716|emb|CBX80972.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora
           ATCC BAA-2158]
          Length = 343

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/334 (22%), Positives = 127/334 (38%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N + I++ K+        + GSWKI YADFMT +MAFFLVMW+I+ +       I  Y
Sbjct: 2   KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T  +   D  +P      +  +   + H                       
Sbjct: 62  FKTPLKVALTGGQRSSDSSSPIPGGGLDPTEKIGEVH----------------------- 98

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                         K  DL+K  +K +   L  L +     ++ 
Sbjct: 99  ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL+ L   +   +  +V + +              I IID +N PMF   S+      
Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  +L      +S+ GHTD  P+        NW LS +RA ++ + L+  G++ 
Sbjct: 173 RDILRAIAPILNQIPNRLSLAGHTDDFPYAGGERGYSNWELSANRANASRRELVAGGLNS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            ++ ++ G +           ++ NRRI +LV +
Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266


>gi|331006559|ref|ZP_08329851.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
 gi|330419628|gb|EGG94002.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
          Length = 325

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 106/318 (33%), Gaps = 46/318 (14%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
            L +W   +AD M++LM FF+++   +  D    K +                  F  Q 
Sbjct: 13  GLPAWMATFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------FGVQT 61

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
             + +   K    I    +    +    +   +K     + ++      +      +   
Sbjct: 62  QLKVTDVPKGTSIIAREFSPAIPEPTPINEIWQKTADITQMSLEVRQVEEYDVEAGDIDK 121

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
               K K                               + +  +++         + L  
Sbjct: 122 EAGVKLKI----------------------------KQQLEDLIRETQNDARELANDLRE 153

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
             +   +  ET    I++ I ++     F   S I   +   V+  I E +      I +
Sbjct: 154 QIVAGEIEIETDGRKIIVRIREK---GSFQSGSHIMNDDYYDVMDDIREAVLTKPGKIQV 210

Query: 269 RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           +GHTD  P R+     NW LS  RA S  Q LM   V   R  ++SGFA  +  + ++  
Sbjct: 211 QGHTDNIPIRSARYRSNWELSTARAVSVAQALMDGDVDPRRF-EVSGFADTQSLVDNNSE 269

Query: 328 --NSANRRIDILVEDRQG 343
              S NRR++I++    G
Sbjct: 270 ENRSRNRRVEIVIRQGLG 287


>gi|152980289|ref|YP_001353788.1| flagellar motor protein MotB [Janthinobacterium sp. Marseille]
 gi|151280366|gb|ABR88776.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
          Length = 328

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 61/336 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            E  + IIIK+        +  G+WKI YADF+T +MAFFL+MW++ +T     + I  +
Sbjct: 3   DEGLRPIIIKRIKKSGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTTKGDLQGIADF 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+   K  M    G  D  +  +   ++   +   +   ++    K              
Sbjct: 62  FSTPLKVAMAGGSGSGDSSSVIKGGGKDMTRIDGQQKKGEDLTPAK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                ++   E               +R
Sbjct: 108 -----------------------------------NFNLKAAEAELERQEVNRLKALKER 132

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            ++  D    +               +L + T  G+ I I+D++N PMF  + +   P T
Sbjct: 133 IEKAIDTIPGLQQ---------FKNQLLIDITTEGLRIQIVDEKNRPMFALARAELQPYT 183

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
            V+L +I ++L      IS+ GHTDA+P+ +      NW LS DRA ++ + L+  G++E
Sbjct: 184 KVILHEIAKILNDIPNRISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMAE 243

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++ ++ G +   L  +SDP+N  NRRI I+V +++
Sbjct: 244 NKVLRVVGLSSAVLFDSSDPLNPVNRRISIIVLNKK 279


>gi|325928224|ref|ZP_08189430.1| flagellar motor protein [Xanthomonas perforans 91-118]
 gi|325541413|gb|EGD12949.1| flagellar motor protein [Xanthomonas perforans 91-118]
          Length = 324

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                    N        K      ++                                 
Sbjct: 58  -----GGSSNKASPVQLGKTQTLGADYDRP------------------------------ 82

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 83  -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    G++  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|315126001|ref|YP_004068004.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
 gi|315014515|gb|ADT67853.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
          Length = 331

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 125/333 (37%), Gaps = 43/333 (12%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  +Q I+IK+         + G+WK+ +ADF   +MAFF+VMWI+  T++  ++ I  Y
Sbjct: 2   ENKNQEIVIKRSRRRATEKPHGGAWKVAFADFTLAMMAFFMVMWIMAITNESEREEIAHY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                 ++      IFD QN P                        +    +        
Sbjct: 62  MRT--HSIFDGGPAIFDPQNSPFPVDLG--------------GSPSVIKHLESGITPPDS 105

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                    Q  +          EK      S     S        +  LSKE       
Sbjct: 106 PKPGMSEVLQVPDGTVEPKAGQGEKLNSAIDSQFEASSELSLLLESIDELSKE------- 158

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                               + +   +L E    G+ + I D ++  MF++S S   P  
Sbjct: 159 --------------------ELLKNNLLVEEVPLGLRVIIRDDKHHQMFERSKSQMTPFF 198

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +   +G ++      I I GH+DAS F + +  NW +S DRA  A +V+   G+   +
Sbjct: 199 EDLFLYLGGLVKDINNKIIISGHSDASLFIDGSSRNWDISGDRAQQARKVMTMGGMPSSQ 258

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + +++ F+ +R     +   S NRR+++L+  +
Sbjct: 259 VLQVNAFSSNRPLNKENQKASENRRVELLILTK 291


>gi|260868487|ref|YP_003234889.1| MotB protein [Escherichia coli O111:H- str. 11128]
 gi|257764843|dbj|BAI36338.1| MotB protein [Escherichia coli O111:H- str. 11128]
 gi|323180688|gb|EFZ66233.1| chemotaxis protein motB [Escherichia coli 1180]
          Length = 308

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDLISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|54295159|ref|YP_127574.1| flagellar motor protein MotB [Legionella pneumophila str. Lens]
 gi|53754991|emb|CAH16479.1| hypothetical protein lpl2239 [Legionella pneumophila str. Lens]
          Length = 312

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 63/331 (19%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II  +K+  +D   + GSWKI +ADF+T +MAFFL+MW++ + +   K  I +YF    
Sbjct: 32  PII--RKIKKNDHKYHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKRPM 89

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           K  +   + + + +   +    N  D       T   +  +  + ++             
Sbjct: 90  KVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                                                E   L  L  E  L+M++   L 
Sbjct: 137 -----------------------------EIIESQANEIKKLEELKSEINLSMEKDPSLA 167

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L K++                L +    G+ I +ID +  PMFD  S    PE   +L 
Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            I ++L      I+I+GHTDA+P+ N       NW LS  RA +A + L+K+G+ E+++ 
Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++G++   L    +P N  NRRI I+V  +
Sbjct: 272 TVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302


>gi|21242652|ref|NP_642234.1| flagellar motor protein MotD [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108121|gb|AAM36770.1| MotB protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 324

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                    N        K      ++                                 
Sbjct: 58  -----GGSSNKASPVQLGKTQSLGADYDRP------------------------------ 82

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 83  -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLAAV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    G++  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|157147077|ref|YP_001454396.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
 gi|157084282|gb|ABV13960.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
          Length = 315

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/334 (22%), Positives = 130/334 (38%), Gaps = 52/334 (15%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           +N+  +   IIK+         + G+WK+ +ADF   +MA F+V+WI+ A  ++ +K I 
Sbjct: 2   RNRSKEHTTIIKRSSRKSHDEFHGGAWKVAFADFTLAMMALFMVLWIMGAVTEEERKEIV 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              N                ++  E +S   I     +    + +D +   T +  +   
Sbjct: 62  SMLN---------------GESVFEGNSLTPITQKEGQGGQLSLIDSRHPKTPKPSKTAE 106

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
               +                                     K+             +  
Sbjct: 107 SSKPLTD---------------------------------AEKQVAQQAKQTESLDDVNA 133

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  ++DLA+ I    S     +    +  E    G+ I + D +   MF +SS+I  P
Sbjct: 134 RSRNEIEDLARIIMKITSTY---DAQANLKMEIVPQGLRILVSDDQKREMFQRSSAILTP 190

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVS 305
               +L +    L      I I GHTDA+ FR+    +NW LS +RA  A  VL   G+ 
Sbjct: 191 FFKRLLTEFAPELNKIDNKIIITGHTDATRFRDQVLYNNWNLSGERAMQARAVLTTGGLD 250

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +I ++SG A   L     P++SANRRI+I+V 
Sbjct: 251 QSKILQVSGMADQMLLDPQHPLSSANRRIEIMVL 284


>gi|259908189|ref|YP_002648545.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
 gi|224963811|emb|CAX55313.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96]
 gi|283478118|emb|CAY74034.1| Chemotaxis protein MotB (Motility protein B) [Erwinia pyrifoliae
           DSM 12163]
          Length = 343

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N + I++ K+        + GSWKI YADFMT +MAFFLVMW+I+ +       I  Y
Sbjct: 2   KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T  +   D  +P     ++  +   + H                       
Sbjct: 62  FKTPLKVALTGGQRSSDSSSPIPGGGRDPTEKIGEVH----------------------- 98

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                         K  DL+K  +K +   L  L +     ++ 
Sbjct: 99  ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             RL+ L   +   +  +V + +              I IID +N PMF   S+      
Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  +L      IS+ GHTD  P+        NW LS DRA ++ + L+  G++ 
Sbjct: 173 RDILRAIAPILNQIPNRISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            ++ ++ G +           ++ NRRI +LV +
Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266


>gi|145297473|ref|YP_001140314.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
 gi|22758827|gb|AAN04225.1| LafU [Aeromonas salmonicida]
 gi|142850245|gb|ABO88566.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 315

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 48/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N + IIIK++      P   G+WK+ +ADF   +MAFF+V+WI+  +  + ++A+     
Sbjct: 3   NHEQIIIKRQQRRSSAPKGGGAWKVAFADFTLAMMAFFMVLWILAVSSQEEREAVASRLR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               ++M +    FD  N P        + S+ E ++   V+                  
Sbjct: 63  D--YSIMDSEANPFDISNSPYPVDLG-GNPSVLEELSPKFVE------------------ 101

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                   +       +E++ +   +          +  ++ + 
Sbjct: 102 ------------------------EGQRMPKHMERNRSIFSDGVSGGYENLLVGKIEGEA 137

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +++ LA  I S    +        +  +    G+ I I D     M+ + S+   P    
Sbjct: 138 QMKQLAGFIGSLADQM---QAKNNLELQLVPQGLRILIRDDDEREMYSRGSARISPFFRH 194

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +  +       + I GHTD++PF      NW LS DRA  A +VL+  G+  +R+ 
Sbjct: 195 MLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRAMMARRVLLAGGMPPERVG 254

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++   +   L+  +DP  S NRRI++LV   Q
Sbjct: 255 QVVAMSDTMLENTADPRGSENRRIELLVMTSQ 286


>gi|296282270|ref|ZP_06860268.1| OmpA/MotB domain-containing protein [Citromicrobium bathyomarinum
           JL354]
          Length = 273

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/330 (22%), Positives = 128/330 (38%), Gaps = 66/330 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N   II+KK   + +  ++ G+WK+ YADF+T +MAFFL+MW++ AT +D ++ +  YF
Sbjct: 7   DNLPPIIVKKV-TVVEGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEDQRRGLADYF 65

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P    +  +  G                                               
Sbjct: 66  TPTLVKVKDSGAGANG-------------------------------------------- 81

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               L +        +   R  + G              +E    +  ++      +++ 
Sbjct: 82  ----LLSGASLTDVDDYPNRQGQTGNKGLTVPRDAMGGPREAARMIERITSRTKDRLEKD 137

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            RL  L  +I                    T  G+ I ++D  +  MF+  +++   +  
Sbjct: 138 PRLAKLMSQIK----------------MVDTTEGVRIDLVDDADFSMFNLGTTVLTRDAA 181

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  I + +      I +RGHTD+  ++N  R +NW LS  RA +  Q LM  G+ +D 
Sbjct: 182 ELLAAIAQAIEPEKREIIVRGHTDSLKWKNPGRINNWSLSAGRAEATRQTLMNEGIPDDS 241

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILV 338
             +I G A   L +  DP +  NRRI I++
Sbjct: 242 FRRIEGVADTELLVKDDPADPRNRRISIVL 271


>gi|163800113|ref|ZP_02194014.1| chemotaxis LafU protein [Vibrio sp. AND4]
 gi|159175556|gb|EDP60350.1| chemotaxis LafU protein [Vibrio sp. AND4]
          Length = 330

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 126/331 (38%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A D   ++ G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHDHDESHGGAWKVAFADFMIALMALFLVLWVMQVVDKEDRKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E +
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSQHNSNHVVSSFFQGDGDGPEMD 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                N                                                    ++
Sbjct: 117 SLIPGN-------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I   +  +        V    T  G+ I + D     MF++  +   P    
Sbjct: 128 QLALLAKVIDKVVGQIS---AQDNVNVTITPQGLRIVLQDDYMQHMFNRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTD++PF+     + NW LS  RA  A   L++ G+ +DR
Sbjct: 185 LLLALAPVFERINNPLIISGHTDSTPFKQRVGRKSNWALSASRADVARNTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNREEPDSSENRRIELFIL 275


>gi|294624200|ref|ZP_06702921.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294665070|ref|ZP_06730375.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292601500|gb|EFF45516.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605151|gb|EFF48497.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 324

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                    N        K      ++                                 
Sbjct: 58  -----GGSSNKASPVQLGKTQSLGADYDRP------------------------------ 82

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 83  -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    G++  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|289667244|ref|ZP_06488319.1| flagellar motor protein MotD [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 324

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                    N        K      +H   +                             
Sbjct: 58  -----GGSSNKASPVQLGKTQSLGADHDRPS----------------------------- 83

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                   + +           TD     +      +P   + +    + ++++  + ++
Sbjct: 84  --------VIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALASNARTTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|168234012|ref|ZP_02659070.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205331986|gb|EDZ18750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 309

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 119/333 (35%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK                 
Sbjct: 66  PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R              MF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+  HTD  P+ N      NW LS DRA ++ + L+  G+   ++
Sbjct: 177 LRAIAPVLNGIPNRISLARHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269


>gi|218548503|ref|YP_002382294.1| flagellar motor protein MotB [Escherichia fergusonii ATCC 35469]
 gi|218356044|emb|CAQ88660.1| protein that enables flagellar motor rotation [Escherichia
           fergusonii ATCC 35469]
 gi|324113675|gb|EGC07650.1| OmpA family protein [Escherichia fergusonii B253]
 gi|325496923|gb|EGC94782.1| flagellar motor protein MotB [Escherichia fergusonii ECD227]
          Length = 304

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 124/337 (36%), Gaps = 72/337 (21%)

Query: 9   QENDQFIII-KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           +  DQ II+ K++   +      GSWKI YADFMT +MAFFLVMW+I+ +       I +
Sbjct: 2   KNRDQPIIVVKRRKPKNHGGAGHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF       +T    I + Q+P      +      + +   +  +LK             
Sbjct: 62  YFRTPLATAITGGDRISNSQSPIPGGGDDYTQQQGEVNRQPSIEELK------------- 108

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                                      E   L  L  +    ++
Sbjct: 109 ----------------------------------------KHMEQSRLNRLRGDLDQLIE 128

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              +L+ L   +   +   V + +   ++                  PMF   S+   P 
Sbjct: 129 SDPKLRALRPHLKIDM---VQEGLRIQIIDSQN-------------RPMFKTGSADVEPY 172

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + LM  G+ 
Sbjct: 173 MRDILRAIAPVLNGIPNRISLAGHTDDYPYANGERGYSNWELSADRANASRRELMVGGLE 232

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A           ++ NRRI +LV ++Q
Sbjct: 233 EGKLLRVVGMAATMRLSDRGGNDAINRRISLLVLNKQ 269


>gi|156976178|ref|YP_001447084.1| flagellar motor protein [Vibrio harveyi ATCC BAA-1116]
 gi|156527772|gb|ABU72857.1| hypothetical protein VIBHAR_04949 [Vibrio harveyi ATCC BAA-1116]
          Length = 330

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A +    + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E +
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGDGPEID 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                N    E                                                 
Sbjct: 117 SLIPGNFDTQE------------------------------------------------- 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I   +  + A      V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V    +  + I GHTD++PF+     + NW LS  RA  A   L++ G+ +DR
Sbjct: 185 LLLALAPVFERISNPLFISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P +S NRRI++ + 
Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275


>gi|300904777|ref|ZP_07122605.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
 gi|301305233|ref|ZP_07211330.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
 gi|300403291|gb|EFJ86829.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
 gi|300839439|gb|EFK67199.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
 gi|315257277|gb|EFU37245.1| chemotaxis protein MotB [Escherichia coli MS 85-1]
          Length = 308

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMCLSDRGPDDAVNRRISLLVLNKQ 268


>gi|311992352|gb|ADQ26749.1| MotB-1 [Aeromonas hydrophila]
          Length = 298

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 112/325 (34%), Gaps = 45/325 (13%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P  L  +   +AD M++LM FF+++      D    K I                
Sbjct: 2   KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 50

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I +       +     T  ++     +  + +        
Sbjct: 51  KAFGVQNILEVKDIPKGTSVIAQEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADLA 110

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                                     +K E   +   ++++    +++++   LAK ++ 
Sbjct: 111 GGH-----------------------DKSEEKLVGGDTQQEAQKQQQQEQSNALAKALAD 147

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +   + D     +  E     I+I I ++     F   S+   P+   V++K+  +L  
Sbjct: 148 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVAALLKD 201

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
               I++ GHTD +   +   + NW LS  RA +    ++K  G    R+  + G A  +
Sbjct: 202 VPGEITVSGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 260

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
             + +    +   NRR++I +   +
Sbjct: 261 PLVPNTSPENRRMNRRVEISIMQGK 285


>gi|297538877|ref|YP_003674646.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297258224|gb|ADI30069.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 311

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 61/337 (18%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +E  + II+K K+      ++ G+WKI YADF+T +MAFFL+MW++ +T  + K  I  Y
Sbjct: 3   EERVRPIIVK-KIKKGGGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKEQKAGISDY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN      +T    +       +            +  TK S  +K       K+     
Sbjct: 62  FNTPLMVALTGGTAVGASDTLIKGG--------GGKDFTKKSGQVKKIDGADGKKTS--- 110

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         +     +K L    
Sbjct: 111 ----------------------------------------------IDAEEAKKALEQAE 124

Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K +L++L KKI   +            +L + T  G+ + I+D++N  MF+ S +   P 
Sbjct: 125 KVKLEELKKKIEKAIDDSPTLSKFKNQLLLDITSDGLRVQIVDEQNRAMFNSSKAEMQPY 184

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +LQ++G+ L      IS+ GHTDA+P+ N      NW LS DRA ++ + L+  G+ 
Sbjct: 185 AKQILQELGKTLNDVPNKISLSGHTDATPYPNGEKSYSNWELSSDRANASRRELVAGGMD 244

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G +   L    +P ++ NRRI I++ ++Q
Sbjct: 245 ETKLLRVVGLSSASLFNKENPFDATNRRISIIIMNKQ 281


>gi|71280941|ref|YP_267837.1| flagellar motor protein MotB [Colwellia psychrerythraea 34H]
 gi|71146681|gb|AAZ27154.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
           34H]
          Length = 314

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 107/306 (34%), Gaps = 29/306 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P  L +W   +AD M++LM FF+++   +  D    K I               
Sbjct: 4   QQCKCPPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +       Q++  +  +  + + +  + S
Sbjct: 53  KFAFGVQNKIEVKDIPKGTSIIAQEFRPGKPEPTPIEVIQQQTMEMTQQMLEFQAGDETS 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +         G+       L +               ++ +    ++++ +L KKI+
Sbjct: 113 AGGRQEQRGTERGGQSQNTEDALSQQ---------ALDQAKQDMEEAAQEQVNELVKKIA 163

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   + D     +  E+    ++I I +      F   S+   P+   V+++IGE+L 
Sbjct: 164 EQLEQQIQDGA---IELESLGQQVIIRIREN---GSFPSGSAFLQPKFWPVIREIGELLN 217

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I I GHTD     +     NW LS  RA +    L+K       R+    G A  
Sbjct: 218 TVPGEIMISGHTDNRGVDSELFSSNWDLSSKRAVAIAHQLIKVPDFDATRLVAA-GHADT 276

Query: 319 RLKIAS 324
           R  + +
Sbjct: 277 RPLVPN 282


>gi|117621021|ref|YP_857806.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562428|gb|ABK39376.1| sodium-driven polar flagellar protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 299

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 112/325 (34%), Gaps = 45/325 (13%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P  L  +   +AD M++LM FF+++      D    K I                
Sbjct: 3   KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  QN  E     K    I +       +     T  ++     +  + +        
Sbjct: 52  KAFGVQNILEVKDIPKGTSVIAQEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADQA 111

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                                     +K E   +   ++++    +++++   LAK ++ 
Sbjct: 112 GGH-----------------------DKSEEKLVGGDTQQEAQKQQQQEQSNALAKALAD 148

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +   + D     +  E     I+I I ++     F   S+   P+   V++K+  +L  
Sbjct: 149 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVAALLKD 202

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
               I+I GHTD +   +   + NW LS  RA +    ++K  G    R+  + G A  +
Sbjct: 203 VPGEITISGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 261

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
             + +    +   NRR++I +   +
Sbjct: 262 PLVPNTSPENRRMNRRVEISIMQGK 286


>gi|218699541|ref|YP_002407170.1| flagellar motor protein MotB [Escherichia coli IAI39]
 gi|218369527|emb|CAR17296.1| protein that enables flagellar motor rotation [Escherichia coli
           IAI39]
          Length = 308

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNCISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++ ++ G A         P ++ NRRI +LV ++
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267


>gi|166711987|ref|ZP_02243194.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 324

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q          T
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +   +                                                   
Sbjct: 63  AANPVQLGKTQTLG---------------------------------------------- 76

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 77  -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|329298550|ref|ZP_08255886.1| OmpA/MotB domain-containing protein [Plautia stali symbiont]
          Length = 319

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 72/335 (21%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
              N   +++K++       ++ GSWKI YADFMT ++AFF+VMW+I+  +      I +
Sbjct: 2   KHGNRPIVLVKRRKHKKHEGSH-GSWKIAYADFMTAMVAFFMVMWLISIANPQELVQIAE 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K  +T  +   D ++P      +      +                        
Sbjct: 61  YFKTPLKVALTGGQRSSDSESPIPGGGDDPTQKKGEVQKQ-------------------- 100

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                             D++    + ++  L  L ++    ++
Sbjct: 101 ---------------------------------VDMDAQKRQLDDIRLNRLREKLDQLIE 127

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              RL+ L   +   +  +V + +   +             ID +N PMF   S+   P 
Sbjct: 128 ADPRLKALRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGSAEVEPY 171

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L+ I  +L      IS+ GHTD   + +      NW LS DRA ++ + L+  G+ 
Sbjct: 172 MRDILRVIAPLLNDIPNKISLSGHTDDFQYASGDRGYSNWELSADRANASRRELVAGGLD 231

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             ++ ++ G A           ++ NRRI +LV +
Sbjct: 232 GGKMLRVVGMADTMKLKNRGANDAVNRRISLLVLN 266


>gi|323948225|gb|EGB44213.1| OmpA family protein [Escherichia coli H120]
          Length = 308

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV +++
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKE 268


>gi|325923665|ref|ZP_08185290.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
 gi|325545864|gb|EGD17093.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
          Length = 404

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    ++I++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EGKSTVVIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                               P           ++     ++  +K+G T    + Q+ E 
Sbjct: 63  RNP----------------SPLSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEM 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                + +  +E  +                                          K K
Sbjct: 107 GRKRDNAADTTEDSR-----------------------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+++ 
Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   ++P N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277


>gi|84624345|ref|YP_451717.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368285|dbj|BAE69443.1| MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 324

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q          T
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +   +                                                   
Sbjct: 63  AASPVQLGKTQTLG---------------------------------------------- 76

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 77  -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|330901956|gb|EGH33293.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 302

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/335 (22%), Positives = 129/335 (38%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A     
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLA----- 55

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                        +      P   S +     ID   +      +  +   +        
Sbjct: 56  -------------VAGYFKDPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTV 102

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I                                               + E       +
Sbjct: 103 PI--------------------------------------------EAENAETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDRQNPTNPINRRIDIVVLTKK 273


>gi|194434087|ref|ZP_03066356.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
 gi|300951513|ref|ZP_07165348.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
 gi|194417631|gb|EDX33731.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
 gi|300449263|gb|EFK12883.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
 gi|332095082|gb|EGJ00116.1| chemotaxis protein motB [Shigella dysenteriae 155-74]
          Length = 308

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  GV  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGVDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|304396266|ref|ZP_07378148.1| OmpA/MotB domain protein [Pantoea sp. aB]
 gi|304356635|gb|EFM21000.1| OmpA/MotB domain protein [Pantoea sp. aB]
          Length = 313

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 123/335 (36%), Gaps = 72/335 (21%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
              N   ++IKK+       ++ GSWKI YADFMT +MAFF+VMW+++  +      I  
Sbjct: 2   KHGNRPIVLIKKRKHKGHEGSH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIAD 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K  +T  +   D  +P      +      +                        
Sbjct: 61  YFKTPLKIAITGGQRSSDSTSPIPGGGDDPTKKIGE------------------------ 96

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                                        + K  D++    K +   L  L ++    ++
Sbjct: 97  -----------------------------VNKVVDMDAQKRKLDEIRLNRLREKLDQLIE 127

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              RL+ L   +   +  +V + +   +             ID +N PMF    +   P 
Sbjct: 128 ADPRLKTLRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGRAEVEPY 171

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L+ I  +L      IS+ GHTD   + +      NW LS DRA ++ + L+  G+ 
Sbjct: 172 MRDILRAIAPILNDIPNRISLAGHTDDFQYASGDKGYSNWELSADRANASRRELVIGGLD 231

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             +I ++ G A           ++ NRRI +LV +
Sbjct: 232 SGKILRVLGMADTMSLKNRGGNDAVNRRISLLVLN 266


>gi|58580310|ref|YP_199326.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188578754|ref|YP_001915683.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58424904|gb|AAW73941.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188523206|gb|ACD61151.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 377

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             +P    S               S+    G+ +  K  +    
Sbjct: 63  RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +     +                                             K K
Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L +++   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L ++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|84622281|ref|YP_449653.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366221|dbj|BAE67379.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 385

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             +P    S               S+    G+ +  K  +    
Sbjct: 63  RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +     +                                             K K
Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L +++   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L ++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VEILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|323968311|gb|EGB63718.1| OmpA family protein [Escherichia coli M863]
 gi|327253019|gb|EGE64673.1| chemotaxis protein motB [Escherichia coli STEC_7v]
          Length = 308

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGTAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|239906259|ref|YP_002952999.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
 gi|239796124|dbj|BAH75113.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
          Length = 341

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 116/340 (34%), Gaps = 28/340 (8%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   +D       W I  AD MT+L+ FFL++  ++  D +  + +             
Sbjct: 8   RKRRHEDED----LWPISLADMMTLLLCFFLLIVAVSHVDLNRYERVADSMQQAMVQEKP 63

Query: 79  ASKG-------IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
           A K        + D+  PP    +     S   H T +     +     +       + +
Sbjct: 64  APKKKTAETAPVTDKTAPPPLPFEKPQVRSKVSHTTLSREPAPLYEQPAQGPQAADASKL 123

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--K 189
                 Q  E  K +      +     ++    +     E       +        +  +
Sbjct: 124 GEPHPGQPQEPAKAAEPTKPGEPAKTPEAAKPGEQPKGTEPAKADATADATAEKAPKPGE 183

Query: 190 KRLQDLAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +R     K +      L    D     V       G+ +++   R    FD +S+   P 
Sbjct: 184 ERTGPTRKSLDDIRKELSGKLDVTAGAVEVRPRDNGVELNL---RGAAFFDLASAEVKPG 240

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306
            I +L+ I   LA +   +++ GHTD  P  +     NW LS  RA    + L+  GV+ 
Sbjct: 241 GIPLLRDIAATLAGTPYKVTVEGHTDNLPMESWLYPSNWELSSARASRVARFLIDHGVAR 300

Query: 307 DRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
           D + ++ G A  +    +            + NRR+ ILV
Sbjct: 301 DHL-RVEGLADTQPVAPNTDPAGRSIPENQARNRRVVILV 339


>gi|68164502|gb|AAY87231.1| predicted flagellar motor protein [uncultured bacterium BAC17H8]
          Length = 385

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 113/367 (30%), Gaps = 58/367 (15%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD  T+LMAFF+++      +    K I                    
Sbjct: 21  PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLKNAFGVQKIVPIVEQP 80

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  +    +P    S  +        +TK  +++K    +Q          I      
Sbjct: 81  KGTTVLSLNFSPSPSPSVTQDMTQQTTDVTKPDLEVKQRDKDQDGGESDGAEEIVKALED 140

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL----- 192
             +               +   +   ++ +       L  + K K  A K ++ +     
Sbjct: 141 AIARGDIEVEVLGENVVVNFTPTEAKDEELPNLLQETLEAIDKAKKAAGKAEQEVLFGGL 200

Query: 193 -----------------------------------QDLAKKISSTLS-GLVADNIVKGVL 216
                                               + A+     L   L  +     V 
Sbjct: 201 EQKLAQLAAAADAAIQSGKAASAEAKAEAEQQKASNEKAEIAEDDLKVALRQEIGQGLVA 260

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
            +     ++I++        F   S+        ++++I  V    +  I++ GHTD  P
Sbjct: 261 VDRQEDKVIITVG---AGGAFPSGSAELTEAARKIMEEIAGVNEAGSGEITVSGHTDDVP 317

Query: 277 --FRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--N 331
             F +  RDNW L+  RA S  Q L  +G V   R+  +S F   +   ++D       N
Sbjct: 318 LIFGSQFRDNWDLAAARAASVVQALEDTGKVPAGRMQAVS-FGESQPVESNDTARGRATN 376

Query: 332 RRIDILV 338
           RRI+I +
Sbjct: 377 RRIEIEI 383


>gi|146312113|ref|YP_001177187.1| flagellar motor protein MotB [Enterobacter sp. 638]
 gi|145318989|gb|ABP61136.1| OmpA/MotB domain protein [Enterobacter sp. 638]
          Length = 309

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 76/334 (22%), Positives = 124/334 (37%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +I+KK+        + GSWKI YADFMT +MAFFLVMW+++ +       I +YF 
Sbjct: 5   SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLVSISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +T    I + ++P      +      +     N  +LK                
Sbjct: 65  TPLATAITGGPRISNSESPIPGGGDDFTQQKGEVKKEPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E   L  L  +    ++   
Sbjct: 109 -------------------------------------KRMEQARLKKLRGDLDQLIEADP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L                   G+ I IID +N PMF   S+        
Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEYYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      IS+ GHTD   + N      NW LS DRA ++ + L+  G+ + +
Sbjct: 176 ILRGIAPVLNGIPNHISLSGHTDDFQYANGEKGYSNWELSADRANASRRELVAGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G +         P ++ NRRI +LV ++Q
Sbjct: 236 VLRVVGMSSSMRVTDRGPEDAVNRRISLLVLNQQ 269


>gi|209767218|gb|ACI81921.1| chemotaxis protein MotB [Escherichia coli]
 gi|320647103|gb|EFX15936.1| flagellar motor protein MotB [Escherichia coli O157:H- str. 493-89]
 gi|320652386|gb|EFX20684.1| flagellar motor protein MotB [Escherichia coli O157:H- str. H 2687]
          Length = 308

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGCGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|117928060|ref|YP_872611.1| OmpA/MotB domain-containing protein [Acidothermus cellulolyticus
           11B]
 gi|117648523|gb|ABK52625.1| OmpA/MotB domain protein [Acidothermus cellulolyticus 11B]
          Length = 290

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 108/325 (33%), Gaps = 67/325 (20%)

Query: 23  IDDTPNNLG---SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
                 +      W + Y D +T+LM  F+V++ I+  D      +              
Sbjct: 15  QHAEGGHGPSHERWLLTYTDMVTLLMVLFIVLFAISVVDKKKFAELAD------------ 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G+  +     +             +   +  +  G T    Q Q   N    ++    
Sbjct: 63  --GLAHQFGSTPKV------------LPAGTGVMDGGKTANHDQGQLTNNPDQPIAPISD 108

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +E      +  +                                     ++   D  ++I
Sbjct: 109 AEQSHAQPSAQASASAAANA----------------------------ERETFLDAERRI 140

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            + L       +   V F     G+++SI+   +  +FD   +   P    VL  I  VL
Sbjct: 141 EAALQA---KGLADSVKFRVETRGLIVSIV--TDQVLFDTGKADLRPIGRQVLDAIAPVL 195

Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                 IS+ GHTD  P        NW LS  RA +  + L+ + G+ E+R+S  +G+A 
Sbjct: 196 RGLPNDISVEGHTDNVPITGGPFASNWELSAIRATTVLRYLVSNDGLPEERMSA-TGYAD 254

Query: 318 HRLKIASDPM--NSANRRIDILVED 340
            R  + +D       NRR+DI+V  
Sbjct: 255 TRPLVPNDTPEHRQQNRRVDIVVLS 279


>gi|166713570|ref|ZP_02244777.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 385

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                             +P    S               S+    G+ +  K  +    
Sbjct: 63  RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +     +                                             K K
Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L +++   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L ++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|220934517|ref|YP_002513416.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995827|gb|ACL72429.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 305

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/328 (16%), Positives = 117/328 (35%), Gaps = 59/328 (17%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++     +   N  +W I Y D +T+L+AFF+VM+ I++ ++   + +        +   
Sbjct: 3   RRSRKHHEEHVNHEAWAIPYGDLITLLLAFFVVMYAISSVNEGKYRVLSDSLVAAFRAPP 62

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            +++       P +     +    +++  T++   L +G+   +                
Sbjct: 63  KSTE-------PIQIGEVGRPAPEMEQQQTRSLAPLDLGAAPAQPGV------------- 102

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                                        I++  +  L     +        + +  LA 
Sbjct: 103 -----------------------------IDRGMDDLLRDAELDADELQAAAEGMSRLAD 133

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           +I   +  L+  ++   +     R  I + I     + +F   S+    E + VLQ++  
Sbjct: 134 EIERAMLPLMDADL---IRMRRDRFWIEVEIN---TSLLFASGSAQLSSEAVPVLQRLAT 187

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L      I + G TD  P        NW LS  RA S   +  ++ +   R++ I G+ 
Sbjct: 188 ILRDFPARIQVEGFTDTVPINTPIFPSNWELSAARAASVVNLFSRNQLDPTRMAAI-GYG 246

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +R    +D       NRR+ I+V   +
Sbjct: 247 EYRPIADNDTAEGRRQNRRVSIVVLAER 274


>gi|82702437|ref|YP_412003.1| flagellar motor protein MotB [Nitrosospira multiformis ATCC 25196]
 gi|82410502|gb|ABB74611.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 308

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 62/333 (18%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              I+IKK         + G WKI YADF+T +MAFFL+MW++ +      + I  YF  
Sbjct: 5   QHRIVIKKVRRQSQG--HGGQWKIAYADFVTAMMAFFLLMWLLGSATRAQLQGISDYFMK 62

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             +++     G  D  +  +   ++ +        T                        
Sbjct: 63  PLESVPERDIGSGDRTSLIQGGGKDLMRRDGQVQKT------------------------ 98

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                             D +  +        +  + + +   L  L +     ++    
Sbjct: 99  ------------------DVDSSEKPLSLRAAQLELERRDARRLEDLKRRLERLIESNPT 140

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + +  K++                L + T  G+ I IID +N PMF  + +   P T  +
Sbjct: 141 MHEFRKQL----------------LLDITTEGLRIQIIDDKNRPMFALARAELEPHTREI 184

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           LQK+G VL      +S+ GHTD++P+ +      NW LS DRA ++ + L+  G++E +I
Sbjct: 185 LQKLGSVLNEMPNKLSLSGHTDSTPYASGEKNYSNWELSADRANASRRELILGGMNEQKI 244

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G +   L   +DP N  NRRI I+V   +
Sbjct: 245 MRVVGLSSAVLFDRNDPTNPVNRRISIIVMSNR 277


>gi|58582454|ref|YP_201470.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58427048|gb|AAW76085.1| MotB protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 286

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q          T
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +   +                                                   
Sbjct: 63  AASPVQLGKTQTLG---------------------------------------------- 76

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 77  -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|294013095|ref|YP_003546555.1| chemotaxis MotB protein [Sphingobium japonicum UT26S]
 gi|292676425|dbj|BAI97943.1| chemotaxis MotB protein [Sphingobium japonicum UT26S]
          Length = 351

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 58/337 (17%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
                N+   + II+KK V      ++ G+WK+ YADF+T +MAFFL+MW++ AT +  +
Sbjct: 4   KKRGANEPEPRPIIVKKIVVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K +  YF P    L   S G          +++     +  +     ++      T  + 
Sbjct: 64  KGLADYFTPTLVQLKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDASGTKDQG 123

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                                                     K+    +      + KE 
Sbjct: 124 G-----------------------------------------KATKAADRAKFESIRKEL 142

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              M R++ ++ L K I                 F  T  G+ I +ID+ +  MF   + 
Sbjct: 143 EARMARRQGIRKLLKNIR----------------FTETHEGLRIDLIDEADFAMFAMGTD 186

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301
             LP+   ++ ++   +      + +RGHTD  P+      +NW LS  RA +  + L  
Sbjct: 187 RLLPQARELVNEVAATIRTMPNPLIVRGHTDGLPYSAGQTMNNWMLSSARAEATRKALAA 246

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           SG+  DR ++I G A        D  +  NRR+ I++
Sbjct: 247 SGIGNDRFARIEGVADREPFAKGDVYDPRNRRMSIIL 283


>gi|301018263|ref|ZP_07182776.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
 gi|306814281|ref|ZP_07448447.1| flagellar motor protein MotB [Escherichia coli NC101]
 gi|300399773|gb|EFJ83311.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
 gi|305852440|gb|EFM52891.1| flagellar motor protein MotB [Escherichia coli NC101]
          Length = 308

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|311696900|gb|ADP99773.1| flagellar motor protein MotB [marine bacterium HP15]
          Length = 307

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 107/321 (33%), Gaps = 65/321 (20%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            ++    + +W + +AD M++LM FF+++   +  D    K I                 
Sbjct: 5   PEEEKPGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q         K    I +  +    +  + +  ++             S +     
Sbjct: 54  AFGVQRDVPALEIPKGTSPIFDKFSPAPPEPTVVNEVKQTTTDEAPELQTLKSPTDM--- 110

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                                               + E  +  + ++ + D+ K +   
Sbjct: 111 ------------------------------------AVEAAMEEQMQETMDDILKVLEPA 134

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++          +     +  I+I + ++     F   S+    E   +L  + EV+   
Sbjct: 135 IAD-------GRINVSEDQRRIVIRVEEK---GSFPSGSAQLTWEFEGLLLDMAEVIEGI 184

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320
              ++I GHTD  P R      NW LS  R+ +   VL+    V   R+  ++G A  + 
Sbjct: 185 PGDLTIEGHTDNVPIRTDRFYSNWDLSAARSAAVANVLVARDQVEPTRL-SVTGLADTKP 243

Query: 321 KIASDPM--NSANRRIDILVE 339
           ++ +      + NRR++I+++
Sbjct: 244 RVPNTSAENRAKNRRVEIIID 264


>gi|289662354|ref|ZP_06483935.1| flagellar motor protein MotD [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 324

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 111/326 (34%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q           
Sbjct: 3   RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSSN 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +   +                                                   
Sbjct: 63  AASPVQLGKTQTLG---------------------------------------------- 76

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 77  -ADYDRPSVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARATLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|188993235|ref|YP_001905245.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167734995|emb|CAP53207.1| motB2 [Xanthomonas campestris pv. campestris]
          Length = 392

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+++ 
Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   ++P N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277


>gi|15802301|ref|NP_288326.1| flagellar motor protein MotB [Escherichia coli O157:H7 EDL933]
 gi|15831853|ref|NP_310626.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. Sakai]
 gi|16129841|ref|NP_416403.1| protein that enables flagellar motor rotation [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89108729|ref|AP_002509.1| protein that enables flagellar motor rotation [Escherichia coli
           str. K-12 substr. W3110]
 gi|157158423|ref|YP_001463195.1| flagellar motor protein MotB [Escherichia coli E24377A]
 gi|157161361|ref|YP_001458679.1| flagellar motor protein MotB [Escherichia coli HS]
 gi|168757929|ref|ZP_02782936.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
 gi|168762313|ref|ZP_02787320.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
 gi|168770876|ref|ZP_02795883.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
 gi|168776560|ref|ZP_02801567.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
 gi|168783193|ref|ZP_02808200.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
 gi|168789758|ref|ZP_02814765.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
 gi|168801871|ref|ZP_02826878.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
 gi|170019766|ref|YP_001724720.1| flagellar motor protein MotB [Escherichia coli ATCC 8739]
 gi|170081544|ref|YP_001730864.1| hypothetical protein ECDH10B_2030 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170684155|ref|YP_001743353.1| flagellar motor protein MotB [Escherichia coli SMS-3-5]
 gi|188492393|ref|ZP_02999663.1| chemotaxis protein MotB [Escherichia coli 53638]
 gi|191168098|ref|ZP_03029897.1| chemotaxis protein MotB [Escherichia coli B7A]
 gi|193065441|ref|ZP_03046510.1| chemotaxis protein MotB [Escherichia coli E22]
 gi|193069870|ref|ZP_03050819.1| chemotaxis protein MotB [Escherichia coli E110019]
 gi|194429327|ref|ZP_03061853.1| chemotaxis protein MotB [Escherichia coli B171]
 gi|194439077|ref|ZP_03071160.1| chemotaxis protein MotB [Escherichia coli 101-1]
 gi|195939593|ref|ZP_03084975.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. EC4024]
 gi|208810604|ref|ZP_03252480.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
 gi|208816679|ref|ZP_03257799.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
 gi|208819881|ref|ZP_03260201.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
 gi|209397424|ref|YP_002270973.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
 gi|217329015|ref|ZP_03445096.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
 gi|218695455|ref|YP_002403122.1| flagellar motor protein MotB [Escherichia coli 55989]
 gi|218705389|ref|YP_002412908.1| flagellar motor protein MotB [Escherichia coli UMN026]
 gi|238901104|ref|YP_002926900.1| protein that enables flagellar motor rotation [Escherichia coli
           BW2952]
 gi|253773154|ref|YP_003035985.1| flagellar motor protein MotB [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161949|ref|YP_003045057.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
 gi|254793513|ref|YP_003078350.1| flagellar motor protein MotB [Escherichia coli O157:H7 str.
           TW14359]
 gi|256017907|ref|ZP_05431772.1| flagellar motor protein MotB [Shigella sp. D9]
 gi|260844299|ref|YP_003222077.1| MotB protein [Escherichia coli O103:H2 str. 12009]
 gi|260855829|ref|YP_003229720.1| MotB protein [Escherichia coli O26:H11 str. 11368]
 gi|261227610|ref|ZP_05941891.1| protein that enables flagellar motor rotation [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258224|ref|ZP_05950757.1| MotB protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291283071|ref|YP_003499889.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
 gi|293405381|ref|ZP_06649373.1| motB [Escherichia coli FVEC1412]
 gi|293446276|ref|ZP_06662698.1| chemotaxis protein MotB [Escherichia coli B088]
 gi|297517349|ref|ZP_06935735.1| flagellar motor protein MotB [Escherichia coli OP50]
 gi|298381025|ref|ZP_06990624.1| chemotaxis protein motB [Escherichia coli FVEC1302]
 gi|300819874|ref|ZP_07100059.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
 gi|300822336|ref|ZP_07102477.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
 gi|300899142|ref|ZP_07117423.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
 gi|300924982|ref|ZP_07140907.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
 gi|300928923|ref|ZP_07144427.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
 gi|300956597|ref|ZP_07168876.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
 gi|301029341|ref|ZP_07192438.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
 gi|301327680|ref|ZP_07220887.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
 gi|301645593|ref|ZP_07245522.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
 gi|307138554|ref|ZP_07497910.1| flagellar motor protein MotB [Escherichia coli H736]
 gi|307314199|ref|ZP_07593809.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|309796000|ref|ZP_07690413.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
 gi|312969933|ref|ZP_07784116.1| chemotaxis protein motB [Escherichia coli 1827-70]
 gi|331642507|ref|ZP_08343642.1| chemotaxis protein MotB [Escherichia coli H736]
 gi|331653299|ref|ZP_08354304.1| chemotaxis protein MotB [Escherichia coli M718]
 gi|331668586|ref|ZP_08369434.1| chemotaxis protein MotB [Escherichia coli TA271]
 gi|331677774|ref|ZP_08378449.1| chemotaxis protein MotB [Escherichia coli H591]
 gi|332278938|ref|ZP_08391351.1| flagellar motor rotation protein [Shigella sp. D9]
 gi|84028148|sp|P0AF07|MOTB_ECO57 RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|84028149|sp|P0AF06|MOTB_ECOLI RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|12515953|gb|AAG56879.1|AE005411_3 enables flagellar motor rotation, linking torque machinery to cell
           wall [Escherichia coli O157:H7 str. EDL933]
 gi|146883|gb|AAA24178.1| chemotaxis protein MotB [Escherichia coli]
 gi|1736548|dbj|BAA15710.1| protein that enables flagellar motor rotation [Escherichia coli
           str. K12 substr. W3110]
 gi|1788198|gb|AAC74959.1| protein that enables flagellar motor rotation [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13362067|dbj|BAB36022.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. Sakai]
 gi|157067041|gb|ABV06296.1| chemotaxis protein MotB [Escherichia coli HS]
 gi|157080453|gb|ABV20161.1| chemotaxis protein MotB [Escherichia coli E24377A]
 gi|169754694|gb|ACA77393.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
 gi|169889379|gb|ACB03086.1| MotB [Escherichia coli str. K-12 substr. DH10B]
 gi|170521873|gb|ACB20051.1| chemotaxis protein MotB [Escherichia coli SMS-3-5]
 gi|187768100|gb|EDU31944.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
 gi|188487592|gb|EDU62695.1| chemotaxis protein MotB [Escherichia coli 53638]
 gi|188999462|gb|EDU68448.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
 gi|189355159|gb|EDU73578.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
 gi|189360307|gb|EDU78726.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
 gi|189367322|gb|EDU85738.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
 gi|189370705|gb|EDU89121.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
 gi|189376024|gb|EDU94440.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
 gi|190901896|gb|EDV61646.1| chemotaxis protein MotB [Escherichia coli B7A]
 gi|192926846|gb|EDV81471.1| chemotaxis protein MotB [Escherichia coli E22]
 gi|192956770|gb|EDV87224.1| chemotaxis protein MotB [Escherichia coli E110019]
 gi|194412634|gb|EDX28930.1| chemotaxis protein MotB [Escherichia coli B171]
 gi|194422036|gb|EDX38040.1| chemotaxis protein MotB [Escherichia coli 101-1]
 gi|208725120|gb|EDZ74827.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
 gi|208731022|gb|EDZ79711.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
 gi|208740004|gb|EDZ87686.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
 gi|209158824|gb|ACI36257.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
 gi|209767220|gb|ACI81922.1| chemotaxis protein MotB [Escherichia coli]
 gi|209767222|gb|ACI81923.1| chemotaxis protein MotB [Escherichia coli]
 gi|209767224|gb|ACI81924.1| chemotaxis protein MotB [Escherichia coli]
 gi|209767226|gb|ACI81925.1| chemotaxis protein MotB [Escherichia coli]
 gi|217318362|gb|EEC26789.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
 gi|218352187|emb|CAU97928.1| protein that enables flagellar motor rotation [Escherichia coli
           55989]
 gi|218432486|emb|CAR13379.1| protein that enables flagellar motor rotation [Escherichia coli
           UMN026]
 gi|238863319|gb|ACR65317.1| protein that enables flagellar motor rotation [Escherichia coli
           BW2952]
 gi|242377610|emb|CAQ32366.1| MotB protein, enables flagellar motor rotation, linking torque
           machinery to cell wall, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324198|gb|ACT28800.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973850|gb|ACT39521.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
 gi|253978044|gb|ACT43714.1| flagellar motor protein MotB [Escherichia coli BL21(DE3)]
 gi|254592913|gb|ACT72274.1| protein that enables flagellar motor rotation [Escherichia coli
           O157:H7 str. TW14359]
 gi|257754478|dbj|BAI25980.1| MotB protein [Escherichia coli O26:H11 str. 11368]
 gi|257759446|dbj|BAI30943.1| MotB protein [Escherichia coli O103:H2 str. 12009]
 gi|260448988|gb|ACX39410.1| OmpA/MotB domain protein [Escherichia coli DH1]
 gi|290762944|gb|ADD56905.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
 gi|291323106|gb|EFE62534.1| chemotaxis protein MotB [Escherichia coli B088]
 gi|291427589|gb|EFF00616.1| motB [Escherichia coli FVEC1412]
 gi|298278467|gb|EFI19981.1| chemotaxis protein motB [Escherichia coli FVEC1302]
 gi|299877767|gb|EFI85978.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
 gi|300316579|gb|EFJ66363.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
 gi|300357232|gb|EFJ73102.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
 gi|300418857|gb|EFK02168.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
 gi|300463077|gb|EFK26570.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
 gi|300525219|gb|EFK46288.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
 gi|300527571|gb|EFK48633.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
 gi|300845775|gb|EFK73535.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
 gi|301076125|gb|EFK90931.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
 gi|306906168|gb|EFN36686.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|308120450|gb|EFO57712.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
 gi|309702112|emb|CBJ01427.1| chemotaxis protein MotB (motility protein B) [Escherichia coli ETEC
           H10407]
 gi|310338218|gb|EFQ03307.1| chemotaxis protein motB [Escherichia coli 1827-70]
 gi|315061195|gb|ADT75522.1| protein that enables flagellar motor rotation [Escherichia coli W]
 gi|315136532|dbj|BAJ43691.1| chemotaxis protein motB [Escherichia coli DH1]
 gi|320188589|gb|EFW63251.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. EC1212]
 gi|320198585|gb|EFW73185.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
 gi|320641743|gb|EFX11131.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. G5101]
 gi|320657987|gb|EFX25749.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320658560|gb|EFX26254.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320668458|gb|EFX35285.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. LSU-61]
 gi|323152620|gb|EFZ38896.1| chemotaxis protein motB [Escherichia coli EPECa14]
 gi|323174594|gb|EFZ60215.1| chemotaxis protein motB [Escherichia coli LT-68]
 gi|323186334|gb|EFZ71684.1| chemotaxis protein motB [Escherichia coli 1357]
 gi|323378228|gb|ADX50496.1| OmpA/MotB domain protein [Escherichia coli KO11]
 gi|323937148|gb|EGB33428.1| OmpA family protein [Escherichia coli E1520]
 gi|323940442|gb|EGB36633.1| OmpA family protein [Escherichia coli E482]
 gi|323961944|gb|EGB57543.1| OmpA family protein [Escherichia coli H489]
 gi|323972601|gb|EGB67804.1| OmpA family protein [Escherichia coli TA007]
 gi|324118949|gb|EGC12838.1| OmpA family protein [Escherichia coli E1167]
 gi|326342267|gb|EGD66048.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. 1044]
 gi|326343818|gb|EGD67580.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. 1125]
 gi|331039305|gb|EGI11525.1| chemotaxis protein MotB [Escherichia coli H736]
 gi|331049397|gb|EGI21469.1| chemotaxis protein MotB [Escherichia coli M718]
 gi|331063780|gb|EGI35691.1| chemotaxis protein MotB [Escherichia coli TA271]
 gi|331074234|gb|EGI45554.1| chemotaxis protein MotB [Escherichia coli H591]
 gi|332089624|gb|EGI94726.1| chemotaxis protein motB [Shigella boydii 5216-82]
 gi|332101290|gb|EGJ04636.1| flagellar motor rotation protein [Shigella sp. D9]
 gi|332343616|gb|AEE56950.1| chemotaxis protein MotB [Escherichia coli UMNK88]
          Length = 308

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|331673414|ref|ZP_08374182.1| chemotaxis protein MotB [Escherichia coli TA280]
 gi|331069612|gb|EGI40999.1| chemotaxis protein MotB [Escherichia coli TA280]
          Length = 308

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|307726280|ref|YP_003909493.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307586805|gb|ADN60202.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 330

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 125/343 (36%), Gaps = 63/343 (18%)

Query: 2   NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           +    + +     II+++ K   D   ++ G+WKI YADF+T +MAFFL+MW++      
Sbjct: 6   SRGSQEQEAPPPPIIVRRSKKGDDHGGHHGGAWKIAYADFVTAMMAFFLLMWLL------ 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                                            S +K D    E      +   +G +  
Sbjct: 60  --------------------------------GSTSKFDKQGIEDYFNTPLSSLLGGSQG 87

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                           S +    +      S+      K T +E +        + P   
Sbjct: 88  T--------------ASARPNVIEGGGRDISDTRPGDGKKTQIEPATPVNVVPTVAPADA 133

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            ++  +K         K +S              +    T  G+ I I+D +N PMF   
Sbjct: 134 ARLQQLKE--------KLVSLIEQSPALKAFKDQIRISITNEGLRIEIVDSQNRPMFASG 185

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           S       + +L +IG  L      ISI GHTDA P+        NW LS +RA +A + 
Sbjct: 186 SPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 245

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+  +++ ++ G A      ++      NRRI ILV ++
Sbjct: 246 LVAGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 288


>gi|91223190|ref|ZP_01258456.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
 gi|269967120|ref|ZP_06181187.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
 gi|91192003|gb|EAS78266.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
 gi|269828257|gb|EEZ82524.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
          Length = 331

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/332 (21%), Positives = 123/332 (37%), Gaps = 61/332 (18%)

Query: 11  NDQFIIIKKKVA-IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             + ++ K+      D  ++ G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + 
Sbjct: 3   KQEHVVFKRAKVYSHDESSHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +       +        Q      S + IDL+ D  +        + S+  K        
Sbjct: 63  HSSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFKGDGD---- 112

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                                         P +          +
Sbjct: 113 ---------------------------------------------GPEIDSLIPGNFDTQ 127

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P   
Sbjct: 128 EQLAALAKVIEQMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFE 184

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L  +  V       + I GHTDA PF+     + NW LS  RA  A   L++ G+ +D
Sbjct: 185 DLLLALAPVFHRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDD 244

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           R+ +++G +   L    +P +S NRRI++ V 
Sbjct: 245 RVMQVTGMSDRALLNPDEPDSSENRRIELFVL 276


>gi|24113274|ref|NP_707784.1| flagellar motor protein MotB [Shigella flexneri 2a str. 301]
 gi|30063341|ref|NP_837512.1| flagellar motor protein MotB [Shigella flexneri 2a str. 2457T]
 gi|110805869|ref|YP_689389.1| flagellar motor protein MotB [Shigella flexneri 5 str. 8401]
 gi|24052278|gb|AAN43491.1| chemotaxis protein MotB [Shigella flexneri 2a str. 301]
 gi|30041593|gb|AAP17321.1| chemotaxis protein MotB [Shigella flexneri 2a str. 2457T]
 gi|110615417|gb|ABF04084.1| flagellar motor protein [Shigella flexneri 5 str. 8401]
 gi|281601336|gb|ADA74320.1| Chemotaxis protein MotB [Shigella flexneri 2002017]
 gi|332757207|gb|EGJ87544.1| chemotaxis protein motB [Shigella flexneri 2747-71]
 gi|332757449|gb|EGJ87784.1| chemotaxis protein motB [Shigella flexneri K-671]
 gi|332766620|gb|EGJ96824.1| motB protein, enables flagellar motor rotation, linking torque
           machinery to cell wall [Shigella flexneri 2930-71]
 gi|333004150|gb|EGK23682.1| chemotaxis protein motB [Shigella flexneri K-272]
 gi|333017634|gb|EGK36946.1| chemotaxis protein motB [Shigella flexneri K-304]
          Length = 308

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRLHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|289665512|ref|ZP_06487093.1| flagellar motor protein MotB [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668313|ref|ZP_06489388.1| flagellar motor protein MotB [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 385

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                               P           ++     ++  +K+G T    + Q+ E 
Sbjct: 63  RNP----------------SPLSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEM 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                + +  +E  ++                                         K K
Sbjct: 107 GRKRDNAADTTEDSRS-----------------------------------------KDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L    DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKIDPQNPINRRISIVVM 277


>gi|21233083|ref|NP_639000.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770023|ref|YP_244785.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114936|gb|AAM42924.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575355|gb|AAY50765.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 393

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+++ 
Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   ++P N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277


>gi|323977926|gb|EGB73012.1| OmpA family protein [Escherichia coli TW10509]
          Length = 308

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|34497482|ref|NP_901697.1| flagellar motor protein MotB [Chromobacterium violaceum ATCC 12472]
 gi|34103337|gb|AAQ59699.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
          Length = 306

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 70/335 (20%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            E+ + I++K K+      ++ G+WKI YADF+T +MAFFL+MW++ +    T   I +Y
Sbjct: 3   DESQRPIVVK-KIKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLGSASQGTLNGISEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  ++   G  D  +  +    +    +                           
Sbjct: 62  FKTPLKVALSGGAGAGDATSVIKGGGNDITKQAGQ------------------------- 96

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                      +   +   E    ++E   L  L ++    + +
Sbjct: 97  --------------------------VNKAGAKQEEVMQKQKEQARLNQLQQKIQQTIDQ 130

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +  +    ++   ++                  G+ I I+D++N PMFD  SS  LP T
Sbjct: 131 SELFKQYKNQLKLEMTPE----------------GLKIQIVDEQNRPMFDSGSSRMLPHT 174

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
            V+LQ++   L      ISI GHTDA PF        NW LS DRA +A + L+  G++E
Sbjct: 175 RVLLQQLAPELNQLPNRISISGHTDAKPFGGGQGGYSNWELSADRANTARRELVAGGLTE 234

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++I ++ G A     I SD  +  NRRI I+V ++
Sbjct: 235 NKILRVVGLASANPLIKSDVFSPENRRITIVVLNK 269


>gi|325915929|ref|ZP_08178225.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325537896|gb|EGD09596.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 396

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 RRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+ + 
Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMEDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   ++P N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277


>gi|254523338|ref|ZP_05135393.1| MotB protein [Stenotrophomonas sp. SKA14]
 gi|219720929|gb|EED39454.1| MotB protein [Stenotrophomonas sp. SKA14]
          Length = 338

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 113/325 (34%), Gaps = 55/325 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   + +              
Sbjct: 3   RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              D       T N V +               ++   + +  +
Sbjct: 53  ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 + + D      +     +  S++ +E               + +++L  +A ++
Sbjct: 90  IGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLNSIADRL 137

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++ L+ L+   +   +    T   I + I       +F   S+         L  + +VL
Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLADVL 191

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + + GHTD  P        NW LS  RA S   +    GV   R++ + G+   
Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
           R +  +D     + NRR+ +++   
Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275


>gi|66043829|ref|YP_233670.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254536|gb|AAY35632.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|330971543|gb|EGH71609.1| flagellar motor protein MotB [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 349

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   +   A     
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLA----- 55

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                        +      P   S +     ID   +      +  +   +        
Sbjct: 56  -------------VAGYFKDPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTV 102

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +                                               + E       +
Sbjct: 103 PL--------------------------------------------EAENAETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDRQNPTNPINRRIDIVVLTKK 273


>gi|167035946|ref|YP_001671177.1| flagellar motor protein MotB [Pseudomonas putida GB-1]
 gi|166862434|gb|ABZ00842.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 350

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIVKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     E  +   IDL     +                       
Sbjct: 61  K--------------DPIGFSESGTPYVIDLGGSPELAP--------------------- 85

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                    +           +++         +E    + E   L  L +E    ++  
Sbjct: 86  ---------EKTINPEVKAEPTQESTTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274


>gi|190574215|ref|YP_001972060.1| flagellar motor protein MotD [Stenotrophomonas maltophilia K279a]
 gi|190012137|emb|CAQ45760.1| putative chemotaxis protein MotB [Stenotrophomonas maltophilia
           K279a]
          Length = 338

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 113/325 (34%), Gaps = 55/325 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   + +              
Sbjct: 3   RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              D       T N V +               ++   + +  +
Sbjct: 53  ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 + + D      +     +  S++ +E               + +++L  +A ++
Sbjct: 90  IGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLNSIADRL 137

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++ L+ L+   +   +    T   I + I       +F   S+         L  + EVL
Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLAEVL 191

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + + GHTD  P        NW LS  RA S   +    GV   R++ + G+   
Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
           R +  +D     + NRR+ +++   
Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275


>gi|170692674|ref|ZP_02883836.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170142330|gb|EDT10496.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 328

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/343 (22%), Positives = 127/343 (37%), Gaps = 64/343 (18%)

Query: 2   NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
            S G +++     II+++ K   D   ++ G+WKI YADF+T +MAFFL+MW++      
Sbjct: 5   RSRGSEDEA-PPPIIVRRSKKGDDHGGHHGGAWKIAYADFVTAMMAFFLLMWLL------ 57

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                                            S +K D    E      +   +G +  
Sbjct: 58  --------------------------------GSTSKFDKQGIEDYFNTPLSSLLGGSEG 85

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                           + +    +      S+      K T +E +        + P   
Sbjct: 86  T--------------AAARPSVVQGGGRDISDTRPGDGKKTQIEAATPVNVVPTVAPADA 131

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            ++  +K         K IS              +    T  G+ I I+D +N PMF   
Sbjct: 132 ARLQQLKE--------KLISLIEQSPTLKAFKDQIRISITNEGLRIEIVDSQNRPMFASG 183

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           S       + +L +IG  L      ISI GHTDA P+        NW LS +RA +A + 
Sbjct: 184 SPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 243

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+  +++ ++ G A      ++      NRRI ILV ++
Sbjct: 244 LVSGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 286


>gi|283834436|ref|ZP_06354177.1| MbhA protein [Citrobacter youngae ATCC 29220]
 gi|291069983|gb|EFE08092.1| MbhA protein [Citrobacter youngae ATCC 29220]
          Length = 332

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 52/339 (15%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M    ++     +  II++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKGPNRRDRGAKTTIIRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKA 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            ++ I    +                Q+         ++    + I              
Sbjct: 61  DRENIVAALH---------------GQSIFNGGGMAPLNKLGKQPIAPG----------- 94

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                                       + +     L K+ + +++    E      L  
Sbjct: 95  --------------------------AQKKNVTRNKLDKTVNPQETARITEENAKKALDV 128

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            +  A+ ++K  Q+L +  +         ++   +  E    G+ + I D +N  MF++ 
Sbjct: 129 NEKTALLKQKSAQELGELATDINVIARKAHMETNLEMEIVPQGLRVLIKDDQNRNMFERG 188

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S+  +P    +L ++  V       I I GHTDA  +++   +NW LS DRA SA +VL 
Sbjct: 189 SAKIMPFFKSLLVELAPVFDSLDNKIIITGHTDAMSYKSNIYNNWNLSGDRALSARRVLE 248

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            +G+ +D++ ++S  A   L  A +P ++ NRRI+I+V 
Sbjct: 249 DAGMPQDKVMQVSAMADQMLLDAKNPESAGNRRIEIMVL 287


>gi|296135687|ref|YP_003642929.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
 gi|295795809|gb|ADG30599.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
          Length = 298

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 107/325 (32%), Gaps = 76/325 (23%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W +  ADF+T+L AFF+VM+ I++ ++   K + Q            
Sbjct: 3   RKKAHEEHENHERWLVSDADFITLLFAFFVVMYSISSLNEGKYKVLSQ------------ 50

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                             I     +  T N V +     +                   +
Sbjct: 51  ----------------TMIAAFTGQPTTPNPVQVGQPFNSMPSAIDLPPIPKQQKPEIIE 94

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                                        A + +K LQ +A+KI
Sbjct: 95  PGRGGPG--------------------------------------AKEVQKTLQGVAEKI 116

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            + L+  +       V    T  G++I I D     +F    +   P+   +L +I  VL
Sbjct: 117 QTLLASAIRKG---DVRVRMTPLGVVIDIHDT---VLFASGQAALTPQAQDLLNQIAGVL 170

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + G TD +P        NW LS  RA S  ++ ++ GV  +++    G+  +
Sbjct: 171 QGVAYPIQVNGFTDTTPIHTAQFPSNWALSAARAVSVVEMFIEQGVKPEQLVAA-GYGQY 229

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
               ++D     +ANRR+ +++   
Sbjct: 230 HPVESNDTAKGRAANRRVSVVIVSP 254


>gi|56551498|ref|YP_162337.1| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56543072|gb|AAV89226.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 326

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 59/340 (17%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M    +KN+   + II+KK +      ++ G+WK+ YADF+T +MAFFL++W++ AT++ 
Sbjct: 1   MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLGATNEK 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +                  KGI D  NP                       L   S+  
Sbjct: 61  ER------------------KGIADYFNP----------------------SLTPESSAG 80

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                         +      H K +        K+                        
Sbjct: 81  SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           ++I+    ++R + L + +   +        + + V    TR G+ I ++DQ +  MF  
Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
            +   +P    ++ ++  V+     +I +RGHTDA P+ +    +NW LS  RA +  + 
Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L+  GV  +R  +I G A     +  + M+  NRR+ I +
Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283


>gi|308050006|ref|YP_003913572.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307632196|gb|ADN76498.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 328

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/331 (19%), Positives = 123/331 (37%), Gaps = 44/331 (13%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
            + ++++ +          G+WK+ +ADF   +MA FLV+W++   D   + +I Q    
Sbjct: 4   HEVVVVRSRSLGGKRAKAGGAWKVAFADFTLAMMALFLVLWLVQVADKQERASIVQAL-- 61

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                    + + +  +     S     L +D  ++     +    T  ++    + N I
Sbjct: 62  -------TGETLLESSSGGSWDSNRPHILELDGTLSMTEAVMPATGTGVQRAGPAMVNQI 114

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                   +                                     L+      ++ + +
Sbjct: 115 PKGERGASAGQG--------------------------------DTLTSLLPGPVETQAQ 142

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ LA++    ++          V  +    G+ I I D     MF + SS   P    +
Sbjct: 143 LEVLAREAGKIIAQSEI---ADNVAIQVVPQGLKILIRDNLQQFMFARGSSRMTPYFEDL 199

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           L  +  +L      + + GHTD++ FR+    NW LS +RA  A + L   GV  ++   
Sbjct: 200 LFSLAPLLKQVQNPLMVSGHTDSTHFRSNDSSNWELSSERALEARRALEFGGVGRNQFFN 259

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + G A       SDP +SANRRI+++V   +
Sbjct: 260 VVGMADQVPVEPSDPRSSANRRIELMVLTHK 290


>gi|91211113|ref|YP_541099.1| flagellar motor protein MotB [Escherichia coli UTI89]
 gi|110642005|ref|YP_669735.1| flagellar motor protein MotB [Escherichia coli 536]
 gi|117624039|ref|YP_852952.1| flagellar motor protein MotB [Escherichia coli APEC O1]
 gi|191172996|ref|ZP_03034530.1| chemotaxis protein MotB [Escherichia coli F11]
 gi|215487100|ref|YP_002329531.1| flagellar motor protein MotB [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218558752|ref|YP_002391665.1| flagellar motor protein MotB [Escherichia coli S88]
 gi|218689885|ref|YP_002398097.1| flagellar motor protein MotB [Escherichia coli ED1a]
 gi|237705847|ref|ZP_04536328.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA]
 gi|300935867|ref|ZP_07150825.1| chemotaxis protein MotB [Escherichia coli MS 21-1]
 gi|300982219|ref|ZP_07175931.1| chemotaxis protein MotB [Escherichia coli MS 200-1]
 gi|312967092|ref|ZP_07781310.1| chemotaxis protein motB [Escherichia coli 2362-75]
 gi|331657937|ref|ZP_08358899.1| chemotaxis protein MotB [Escherichia coli TA206]
 gi|91072687|gb|ABE07568.1| chemotaxis MotB protein [Escherichia coli UTI89]
 gi|110343597|gb|ABG69834.1| chemotaxis MotB protein [Escherichia coli 536]
 gi|115513163|gb|ABJ01238.1| chemotaxis MotB protein [Escherichia coli APEC O1]
 gi|190906707|gb|EDV66312.1| chemotaxis protein MotB [Escherichia coli F11]
 gi|215265172|emb|CAS09560.1| protein that enables flagellar motor rotation [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218365521|emb|CAR03248.1| protein that enables flagellar motor rotation [Escherichia coli
           S88]
 gi|218427449|emb|CAV17777.1| protein that enables flagellar motor rotation [Escherichia coli
           ED1a]
 gi|222033636|emb|CAP76377.1| chemotaxis protein motB [Escherichia coli LF82]
 gi|226900604|gb|EEH86863.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA]
 gi|300307289|gb|EFJ61809.1| chemotaxis protein MotB [Escherichia coli MS 200-1]
 gi|300458979|gb|EFK22472.1| chemotaxis protein MotB [Escherichia coli MS 21-1]
 gi|307626628|gb|ADN70932.1| flagellar motor protein MotB [Escherichia coli UM146]
 gi|312288556|gb|EFR16458.1| chemotaxis protein motB [Escherichia coli 2362-75]
 gi|312946487|gb|ADR27314.1| flagellar motor protein MotB [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315286597|gb|EFU46030.1| chemotaxis protein MotB [Escherichia coli MS 110-3]
 gi|315296507|gb|EFU55804.1| chemotaxis protein MotB [Escherichia coli MS 16-3]
 gi|320194396|gb|EFW69027.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327]
 gi|323186771|gb|EFZ72091.1| chemotaxis protein motB [Escherichia coli RN587/1]
 gi|323952390|gb|EGB48263.1| OmpA family protein [Escherichia coli H252]
 gi|323956291|gb|EGB52034.1| OmpA family protein [Escherichia coli H263]
 gi|324007255|gb|EGB76474.1| chemotaxis protein MotB [Escherichia coli MS 57-2]
 gi|324013535|gb|EGB82754.1| chemotaxis protein MotB [Escherichia coli MS 60-1]
 gi|331056185|gb|EGI28194.1| chemotaxis protein MotB [Escherichia coli TA206]
          Length = 308

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++ ++ G A         P ++ NRRI +LV ++
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267


>gi|312958642|ref|ZP_07773162.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
 gi|311287185|gb|EFQ65746.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
          Length = 339

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 83/334 (24%), Positives = 128/334 (38%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIIKRVKRFA-AGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     E  +   IDL     +           T   ++   +E 
Sbjct: 61  K--------------DPIGFSESGTPFVIDLGGSPELAPERTINPEVKTEAPQEKIPIER 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +       Q  +     L ++ +                                     
Sbjct: 107 DTVETMAEQVEQERLELLLQELQ------------------------------------- 129

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                     +              + FE T  G+ I I D  N PMFD  S+   P   
Sbjct: 130 ----------NKVEENPQMMKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+     + +
Sbjct: 180 DILLAMADTIKTVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ GFA  +L    DP N ANRRIDI+V  ++
Sbjct: 240 VARVVGFASSQLFDHKDPFNPANRRIDIVVLTKK 273


>gi|194365634|ref|YP_002028244.1| flagellar motor protein MotD [Stenotrophomonas maltophilia R551-3]
 gi|194348438|gb|ACF51561.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 338

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 113/325 (34%), Gaps = 55/325 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   + +              
Sbjct: 3   RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              D       T N V +               ++   + +  +
Sbjct: 53  ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 + + D      +     +  S++ +E               + +++L  +A ++
Sbjct: 90  VGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLSSIADRL 137

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++ L+ L+   +   +    T   I + I       +F   S+         L  + EVL
Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLAEVL 191

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + + GHTD  P        NW LS  RA S   +    GV   R++ + G+   
Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
           R +  +D     + NRR+ +++   
Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275


>gi|26248156|ref|NP_754196.1| flagellar motor protein MotB [Escherichia coli CFT073]
 gi|227885682|ref|ZP_04003487.1| flagellar motor protein MotB [Escherichia coli 83972]
 gi|300994031|ref|ZP_07180650.1| chemotaxis protein MotB [Escherichia coli MS 45-1]
 gi|301050754|ref|ZP_07197612.1| chemotaxis protein MotB [Escherichia coli MS 185-1]
 gi|26108560|gb|AAN80763.1|AE016762_16 Chemotaxis motB protein [Escherichia coli CFT073]
 gi|227837255|gb|EEJ47721.1| flagellar motor protein MotB [Escherichia coli 83972]
 gi|300297571|gb|EFJ53956.1| chemotaxis protein MotB [Escherichia coli MS 185-1]
 gi|300406399|gb|EFJ89937.1| chemotaxis protein MotB [Escherichia coli MS 45-1]
 gi|307553906|gb|ADN46681.1| flagellar motor rotation protein [Escherichia coli ABU 83972]
 gi|315290318|gb|EFU49694.1| chemotaxis protein MotB [Escherichia coli MS 153-1]
          Length = 308

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++ ++ G A         P ++ NRRI +LV ++
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267


>gi|13446371|gb|AAK20927.1| LafU [Aeromonas hydrophila]
          Length = 315

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 48/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N + IIIK++   +  P   G+ K+ +ADF   +MAFF+V+WI+  +  + ++ + +   
Sbjct: 3   NHEQIIIKRQQRRNSAPKGGGACKVAFADFTLAMMAFFMVLWILAVSSQEEREVVARRLR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               ++M +    FD +N P           +DE   K   + +                
Sbjct: 63  D--YSIMDSEANPFDIRNSPYPVDLGGNLSVLDELSPKFVEEGQ---------------- 104

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                           +E++ +   +          +  ++ + 
Sbjct: 105 ---------------------------RMPKHMERNRSIFSDGASGGYENLLVGKIEGEA 137

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +++ LA  ++      +       +     R G+ I I D     M+ + S+   P    
Sbjct: 138 QMKQLAGSLA---RWPIRCKSRTTLSCNWYRKGLRILIRDDDEREMYSRGSARISPFFRH 194

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  +  +       + I GHTD++PF      NW LS DRA  A +VL+  G+  +R+ 
Sbjct: 195 MLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRAMMARRVLLAGGMPPERVG 254

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++  +   L+  +DP  S NRRI++LV   Q
Sbjct: 255 QVAAMSDTMLENTADPRGSQNRRIELLVMTSQ 286


>gi|188576036|ref|YP_001912965.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520488|gb|ACD58433.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 286

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N  +W I YAD MT+L+AFF+VM+ I++ ++   K + Q          T
Sbjct: 3   RRRTHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +   +                                                   
Sbjct: 63  AASPVQLGKTQTLG---------------------------------------------- 76

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +++ + S+ +           TD     +      +P   + +    + ++++  + ++
Sbjct: 77  -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +S TL+ L+   +   +        I + I       +F   S+         L  +  V
Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G+TD  P        NW LS  RA S   +    GV+  R++ + G+  
Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            R +  +        NRR+ +++   
Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274


>gi|294492517|gb|ADE91273.1| chemotaxis protein MotB [Escherichia coli IHE3034]
          Length = 308

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R              MF   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            ++ ++ G A         P ++ NRRI +LV ++
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267


>gi|103488396|ref|YP_617957.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98978473|gb|ABF54624.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 287

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/327 (24%), Positives = 128/327 (39%), Gaps = 57/327 (17%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           + II+KK +      ++ G+WK+ YADF+T +MAFFL+MW++ AT++  +KA+  YF P 
Sbjct: 10  RPIIVKKVIEAGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATNEKQRKALADYFAPT 69

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
                  + G           S +K                + G+         +     
Sbjct: 70  IVQSKQDTAGSNGLFGGDSLVSVDKY----------PHGAAQTGTRAMTIPRDAVGGPRE 119

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
               ++++E  + SL   S K +   K                                 
Sbjct: 120 ASGRAREAESKRFSLLAQSMKDRIQSKGD------------------------------- 148

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                             + + + F  T  G+ I I+D  +  MF   +S   P    + 
Sbjct: 149 ---------------LRRLARNLHFTETMEGLRIDIVDDADFSMFALGTSQLTPAGAKLF 193

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++   +A +   + IRGHTDA+P+      +NWRLS+DRA      L   GV+ DR ++
Sbjct: 194 AEVAVPIAEAPNQLMIRGHTDAAPWSAKSGTNNWRLSVDRAEVTRHYLEFRGVASDRFAR 253

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338
           I G A     I SD  +  NRRI I +
Sbjct: 254 IEGVADREPYIPSDRFDPRNRRISITL 280


>gi|331683396|ref|ZP_08383997.1| chemotaxis protein MotB [Escherichia coli H299]
 gi|284921808|emb|CBG34881.1| chemotaxis protein MotB (motility protein B) [Escherichia coli 042]
 gi|331079611|gb|EGI50808.1| chemotaxis protein MotB [Escherichia coli H299]
          Length = 308

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|281178957|dbj|BAI55287.1| chemotaxis protein MotB [Escherichia coli SE15]
          Length = 308

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKRPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|325271245|ref|ZP_08137790.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
 gi|324103648|gb|EGC00950.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
          Length = 340

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIVKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     E  +   IDL     +  +                    
Sbjct: 61  Q--------------DPIGFSESGTPYVIDLGGSPEMAPDKTI----------------- 89

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                             T  ++          +E    + E   L  L +E    ++  
Sbjct: 90  -------------NPEVKTEPTQPSPTQLDKDQVETMAEQVERERLELLLQELQNKVEEN 136

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKNPFNPVNRRIDIIVLTKK 274


>gi|330830900|ref|YP_004393852.1| sodium-driven polar flagellar protein [Aeromonas veronii B565]
 gi|328806036|gb|AEB51235.1| Sodium-driven polar flagellar protein [Aeromonas veronii B565]
          Length = 283

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 105/313 (33%), Gaps = 47/313 (15%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++      D    K I                  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSM-----------DKAFGVQNILEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +     T  ++     +  + +L         ++        
Sbjct: 50  DIPKGTSVIAQEFRPGRPEPTPIDTVMQQTIDLTQTELEFLPGESDQAGGQDKSDGKQTG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G                              A K +++   LAK ++  +   + D    
Sbjct: 110 GDT-------------------------AQDAKKAQEQSNTLAKALAEQMKDQIQDGA-- 142

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E     I+I I ++     F   S+   P+   V++K+  +L      I+I GHTD
Sbjct: 143 -IEIEALGQQIIIRIREK---ASFPAGSAFLQPQFWPVIRKVATLLKDVPGEITISGHTD 198

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
                +   + NW LS  RA +   Q+L   G  + R+  + G A  +  + +    +  
Sbjct: 199 NVATEDELFQSNWELSSQRAVAVAHQMLKVPGFDQGRLV-VQGMADSQPLVPNTTPENRR 257

Query: 331 -NRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 258 MNRRVEIAIMQGK 270


>gi|331647484|ref|ZP_08348576.1| chemotaxis protein MotB [Escherichia coli M605]
 gi|330911699|gb|EGH40209.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
 gi|331043208|gb|EGI15346.1| chemotaxis protein MotB [Escherichia coli M605]
          Length = 308

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKRPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G++ 
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|83648052|ref|YP_436487.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
 gi|83636095|gb|ABC32062.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
          Length = 328

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 133/334 (39%), Gaps = 67/334 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    II+++         + G+WK+ +ADF T +MAFFLV+W+  A   + K AI  YF
Sbjct: 3   EERPPIIVRRVRKGHH--AHGGAWKVAFADFATAMMAFFLVLWLSEAATKEQKDAISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                     S  + D                    +T        G    + + +  E+
Sbjct: 61  TDPVGFEQGGSPYVIDLGGS----------------VTVTVTQDTAGKPQDQPEVRMRED 104

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I  L+                                 + E   L  L +E +  +++ 
Sbjct: 105 TIQDLAA--------------------------------QLEQQKLTQLMQEIMAQIEKN 132

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L     ++                L + T  G+ I I+D+R  PMFD   S   P   
Sbjct: 133 PKLNAFKDQL----------------LLDITDEGLRIQIVDKRQRPMFDSGRSELQPYFE 176

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L ++ + +A     IS+ GHTDA PF       NW LS DRA +A + L++ G+ E R
Sbjct: 177 EILFELAKSIAKVRNKISVSGHTDAQPFLGRDNYSNWELSADRANAARRALVEGGLPEGR 236

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G A   L    DP N  NRRI ILV +++
Sbjct: 237 MARVVGLASSVLFDEKDPYNPVNRRISILVLNKK 270


>gi|302877353|ref|YP_003845917.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302580142|gb|ADL54153.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 295

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 59/314 (18%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
           G+WKI YADF+T LMAFFL++W+I++T  D ++AI +YF      + +  +         
Sbjct: 29  GAWKIAYADFVTALMAFFLMLWLISSTSADYRQAISEYFETPLMVVFSGGQ--------S 80

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
              + + I  S  E  T +S  +  G                                  
Sbjct: 81  NDVTSSLIVGSYGEDKTFSSGQVNKGE--------------------------------- 107

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                     +D  + ++ +E   L  L  +    ++    L    +++   L+      
Sbjct: 108 GAVEDIAISVSDAGRLLHMQEVVRLKLLKAQLEQLIRTDPNLNQFKEQLQIDLTSE---- 163

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
                       G+ I IID +N PMF+  S+I  P T+ +L+ IG  L      I + G
Sbjct: 164 ------------GLRIMIIDAKNRPMFEIGSAILQPYTVEILRSIGSTLNRVPNKIGLSG 211

Query: 271 HTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           HTDA+ ++  +    NW LS DRA ++ + L+  G+ +++I ++ G +   L   +DP +
Sbjct: 212 HTDAANYQGGSAGYSNWDLSADRANASRRTLIAGGMGQEKILRVVGLSDSVLFNPADPYD 271

Query: 329 SANRRIDILVEDRQ 342
           + NRRI I+V +++
Sbjct: 272 AHNRRISIIVMNQK 285


>gi|302383636|ref|YP_003819459.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302194264|gb|ADL01836.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 298

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 48/332 (14%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +D+ I+IKK   +    ++ G+WK+ YADF+T +MAFFL+MW+IN TD + K+ I +YF 
Sbjct: 2   SDRPILIKKVKKVVGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKRGIAEYFA 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +  T+  G                                 G T+  +   +   +
Sbjct: 62  PASVSQTTSGSGGIL------------------------------GGTSLGEDGSKSSGS 91

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +  L                +          +L + I   E       ++    AM+R  
Sbjct: 92  MSVLEQQAPEAPEDAPEDVGTNANLAAASEEELRQEIAAREAAEFASAAESLRQAMQRMP 151

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +L+K++                + + T  G+ I ++DQ    MFD++S+ P     V
Sbjct: 152 ELAELSKQL----------------IIDQTPEGLRIQLVDQEGRSMFDQNSARPNARAQV 195

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  V+      ISI GHT A      A    +W LS +RA ++  +L  +GV  DR
Sbjct: 196 LLRAIAGVVNRLPNRISISGHTSAVAGSGRASVATDWPLSANRADASRAILQAAGVDADR 255

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +  ++G A        DP  + NRRI I++  
Sbjct: 256 VYSVAGKAGSDPLYPDDPSLAGNRRIAIVLLR 287


>gi|229588064|ref|YP_002870183.1| flagellar motor protein MotB [Pseudomonas fluorescens SBW25]
 gi|229359930|emb|CAY46784.1| chemotaxis MotB protein [Pseudomonas fluorescens SBW25]
          Length = 339

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 82/334 (24%), Positives = 126/334 (37%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIIKRVKRFA-AGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     E  +   IDL     +           T   ++   +E 
Sbjct: 61  K--------------DPIGFSESGTPFVIDLGGSPQLAPERTINPEVKTEAPQEKIPIER 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +       Q  +     L ++ +                                     
Sbjct: 107 DTVEAMAEQVEQERLELLLQELQT------------------------------------ 130

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                                    + FE T  G+ I I D  N PMFD  S+   P   
Sbjct: 131 -----------KVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+     + +
Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ GFA  +L    DP N  NRRIDI+V  ++
Sbjct: 240 VARVVGFASSQLFDHKDPFNPINRRIDIVVLTKK 273


>gi|315179650|gb|ADT86564.1| lateral flagellar motor protein B [Vibrio furnissii NCTC 11218]
          Length = 330

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 122/331 (36%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+     D P++ G+WK+  ADFM  LMA FLV+W++   + + +KAI     
Sbjct: 3   KQEHVVFKRSTRSHDEPHHGGAWKVAMADFMIALMALFLVLWVMQVVNKEERKAIV---- 58

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               +L +AS       NP + S          E    +  D     T+          +
Sbjct: 59  ---AHLHSASVFDRSYGNPFDTSQSISPIDLASESSVPSKHDANHTVTSFYNGNGNGPES 115

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +  +                                                   ++
Sbjct: 116 DAIIPGN------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I + +  + A      V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLTILAKVIEAMMRQISAQG---NVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTD++ F+     R NW LS +RA  A Q L+  G+ E R
Sbjct: 185 LLLALAPVFQRVENPLIISGHTDSTAFKQRFSHRTNWELSANRANIARQTLVAGGMPEQR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P  S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNPDEPDGSENRRIELFVL 275


>gi|283832712|ref|ZP_06352453.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
 gi|291072391|gb|EFE10500.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
          Length = 309

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 76/333 (22%), Positives = 122/333 (36%), Gaps = 71/333 (21%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              I++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIIVVKRRKHKGHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + Q+P      +      + H   N  DL+                 
Sbjct: 66  PLATAVTGGNRISNSQSPIPGGGDDYTQQQGEVHKQPNIDDLR----------------- 108

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                                                + E   L  L  +    ++   +
Sbjct: 109 ------------------------------------KRMEQSRLRKLRGDLDQLIEADPK 132

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+ L   +   L   V + +   ++    R              MF   S+   P    +
Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+ + ++
Sbjct: 177 LRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKV 236

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ G A         P ++ NRRI +LV ++Q
Sbjct: 237 LRVVGMAATMRLSDRGPEDAINRRISLLVLNKQ 269


>gi|330807221|ref|YP_004351683.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375329|gb|AEA66679.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 344

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+   I    ++ G+WKI +ADF T +MAFFLV+W+++    + K AI  YF
Sbjct: 2   ENNQPIIIKRVKRIA-AGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                          D     E  +   IDL     +  ++                   
Sbjct: 61  K--------------DPVGFTESGTPYIIDLGGSPTLAPDT------------------- 87

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                            +    +  K    +  +E    + E   L  L +E    ++  
Sbjct: 88  ------------TLNPEVKSQPQPDKVTTDTEQVEGMAEQIERERLELLLQELQNKVEEN 135

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T  G+ I I+D  N PMFD  S+   P   
Sbjct: 136 PQLQKFKDQI----------------LFEITPNGLRIQIMDAENRPMFDSGSARLKPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+     +++
Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYVGKGDFGNWELSANRANAARRALVAGSYPDEQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 240 VARVVGYASSALFDRKDPFNPVNRRIDIVVLTKK 273


>gi|332531608|ref|ZP_08407505.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
 gi|332038971|gb|EGI75400.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
          Length = 318

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 131/337 (38%), Gaps = 67/337 (19%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + +  Q IIIK+        +  G+WKI YADF+T +MAFFL+MW++ +T     K +  
Sbjct: 4   DAKKLQPIIIKRVKKGGHGVH-GGAWKIAYADFVTAMMAFFLLMWLLGSTSKGDLKGLAD 62

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K  M    G     +                                       
Sbjct: 63  YFRAPLKVSMVGGNGSGASSSIMPGG---------------------------------- 88

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                             +LT                    + +   L  LS +   A+ 
Sbjct: 89  --------------GADLTLTAGQHPEDASAADKRRRAETARRDAQRLAALSAKISAAIS 134

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              +L+  +++I                  E+T  G+ I I+D++  PMF   ++   P 
Sbjct: 135 NNAQLRRFSRQIQ----------------LESTPDGLKIQIVDEQGRPMFTTGNAAVQPY 178

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
              +L++IG  L      IS+ GHTD + +     +  NW LS DRA +A + L+ +G+ 
Sbjct: 179 MRDILREIGAALNGVENKISLDGHTDVTQYGNQGRSYSNWELSADRANAARRELVAAGMP 238

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ED++ +++G A   L +  +P   ANRRI I+V  ++
Sbjct: 239 EDKLLRVTGLAASNLLVPDNPTAPANRRISIMVLTKE 275


>gi|260767946|ref|ZP_05876880.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
 gi|260615976|gb|EEX41161.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
          Length = 330

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 122/331 (36%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+     D P++ G+WK+  ADFM  LMA FLV+W++   + + +KAI     
Sbjct: 3   KQEHVVFKRSTRSHDEPHHGGAWKVAMADFMIALMALFLVLWVMQVVNKEERKAIV---- 58

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               +L +AS       NP + S          E    +  D     T+          +
Sbjct: 59  ---AHLHSASVFDRSYGNPFDTSQSISPIDLASESSVPSKHDANHTVTSFYNGNGNGPES 115

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +  +                                                   ++
Sbjct: 116 DAIIPGN------------------------------------------------FDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I + +  + A      V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLTILAKVIEAMMRQISAQG---NVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTD++ F+     R NW LS +RA  A Q L+  G+ E R
Sbjct: 185 LLLALAPVFQRVENPLIISGHTDSTAFKRRFSHRTNWELSANRANIARQTLVAGGMPEQR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    +P  S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNPDEPDGSENRRIELFVL 275


>gi|330939854|gb|EGH43087.1| flagellar motor protein MotB [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 333

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 62/319 (19%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              ++ G+WKI +ADF T +MAFFLV+W++++   +   A+  YF        + S  + 
Sbjct: 3   GGGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYFKDPVGFSDSGSPYVI 62

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           D    PE S    ++  +    + ++V +                               
Sbjct: 63  DLGGSPEMSPNQTLNPEVQTTPSPDTVPI------------------------------- 91

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                         ++ + E      E   L  L +E    ++   +LQ    +I     
Sbjct: 92  --------------EAENAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQI----- 132

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                      LFE T+ G+ I I+D  N PMFD  S+   P    +L  + + +     
Sbjct: 133 -----------LFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 181

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            +SI GHTDA+PF       NW LS +RA +A + L+     + +++++ G+A   L   
Sbjct: 182 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSALYDH 241

Query: 324 SDPMNSANRRIDILVEDRQ 342
            +P N  NRRIDI+V  ++
Sbjct: 242 QNPTNPINRRIDIVVLTKK 260


>gi|119503684|ref|ZP_01625767.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
 gi|119460746|gb|EAW41838.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
          Length = 312

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 110/324 (33%), Gaps = 53/324 (16%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             D  P    +W   +AD M++LM FF+++   +  D    K I               K
Sbjct: 6   DEDSGPAGSPAWMATFADLMSLLMCFFVIILSFSELDVIKYKQIAASM-----------K 54

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  Q   E ++  K    +         +       ++    +  N++   +   +  
Sbjct: 55  NAFGVQQKMEITAIPKGTSVVATEFQPGIPEPTPLERIEQVTTDQDLNSLRIGNPDARET 114

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             +      +E+ + L + T+L                             + L + + +
Sbjct: 115 EAREVKDLITEEMEMLIEETEL---------------------------DAEMLRRLLKA 147

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +           +  E+    I+I I ++     F   S+      + VL K G  L  
Sbjct: 148 EIE-------AGQIDVESEGRTIVIRIREK---GSFPSGSAQLDIGFLEVLDKTGFALNE 197

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319
              +I I GHTD  P        NW LS  R+ +  + L+    +   R+  ISG A  R
Sbjct: 198 IKGLIFIEGHTDNVPINTARYGSNWDLSAARSVAVAERLLDGPKMDPIRL-TISGHADTR 256

Query: 320 LKIASDP--MNSANRRIDILVEDR 341
            +  +      + NRR++++V+  
Sbjct: 257 PQAPNQSWEGRAQNRRVEVVVKQP 280


>gi|288942612|ref|YP_003444852.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288897984|gb|ADC63820.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 309

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 103/325 (31%), Gaps = 52/325 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N  +W I Y D +T+LMAFF+VM+ ++  D      + +            
Sbjct: 3   RRKRHEEHVNHEAWAIPYGDLVTLLMAFFVVMYAVSVVDAGKYSVLSESLIEAFGTSAPI 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                                           D  + S       +R    +  ++ S  
Sbjct: 63  D--------------------------PIQIGDPILESNPVSDDVRRSLAPVEVIAGSPA 96

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            E  +  L   S     L                             +R + L ++ +  
Sbjct: 97  IETTEPDLEPFSPTDVALAALIGS-------------------ASEEERGRILGEIREMS 137

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +     + +      +  +     I ++I       +F   S+   P    VL ++  +L
Sbjct: 138 TELEEAMGSLIEAGNIEIKRQPYWIEVAINSNL---LFSSGSATLEPAARPVLARVARLL 194

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + GHTD  P  N     NW LS  RA +   +  ++G+  +R+  I G+   
Sbjct: 195 GRRDVRIHVEGHTDNLPINNTIYPSNWELSSGRAATVVNLFAQNGIDPERMVAI-GYGQF 253

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
           +   ++      + NRR+ ++V   
Sbjct: 254 QPTDSNATEAGRARNRRVAVIVLPD 278


>gi|24375768|ref|NP_719811.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
 gi|24350713|gb|AAN57255.1|AE015861_7 chemotaxis motB protein [Shewanella oneidensis MR-1]
          Length = 275

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/326 (21%), Positives = 115/326 (35%), Gaps = 65/326 (19%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    D P N   W I YADFMT+L A F+V++    +D +  K + +            
Sbjct: 2   KKKKVDPPENHERWLISYADFMTLLFALFVVLYSFAMSDKNEAKFMVE------------ 49

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G+ D  +     S   ++       +    +    + + + +                
Sbjct: 50  --GLIDSLSKIGLISTPAVNALAPGGTSILEPNTVTSAVDAEPKL--------------- 92

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                          E     P + E    +   K    + K  
Sbjct: 93  ------------------------------IETATTAPSTSESNNDLTNAKSNDTIRKYK 122

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L  +   + V  +     ++I I D  N   F   S+   P+ I ++ KIGEV+
Sbjct: 123 EIISAKLKNEIENQEVEIDEVSDNLIIRIGD--NNTFFASGSAFIQPKFIPLIDKIGEVI 180

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
           A     + I GHTDA+    I  DNW LS  RA +  +++ K  GV+  RI  + G A  
Sbjct: 181 ASVPGRVVIAGHTDATLPMEIYADNWDLSSLRATAVVRIMTKNKGVNPSRII-VQGLADT 239

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
           + +  +D       NRRI+I++    
Sbjct: 240 QPRFQNDTPEHRQKNRRIEIILNQGN 265


>gi|315499937|ref|YP_004088740.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
 gi|315417949|gb|ADU14589.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
          Length = 300

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 44/309 (14%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MW+IN T  + KK +  YF P   +  T+  G         
Sbjct: 25  AWKVAYADFVTAMMAFFLLMWLINTTSPEQKKGVADYFAPASVSQTTSGSGGILAGTAIG 84

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
           R                            ++       ++   +   Q          D 
Sbjct: 85  RDGVK------------------------QEGSMAFIEHMAPEAPDVQDRDGTAKNAAD- 119

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                     +L + + K E       ++    A++    L +L+K I            
Sbjct: 120 ---LSQTPEEELREELQKREEASFRSAAESLRQALQDMPELAELSKNI------------ 164

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
               L + T  G+ I +IDQ    MF+ +S+ P     ++L+ + +V+      ISI GH
Sbjct: 165 ----LVDQTPEGLRIQLIDQEGRAMFNANSTQPNERARLLLRAVAKVVNQLPNRISITGH 220

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           T  +P    +  +W+LS DRA ++ QVL  +GV +DR++++SG A        DP  + N
Sbjct: 221 TTGTPGMGQSDKDWKLSADRADASRQVLQGAGVDQDRVAQVSGKAAKEPLYPDDPTLAGN 280

Query: 332 RRIDILVED 340
           RRI I++  
Sbjct: 281 RRIAIILLR 289


>gi|289208360|ref|YP_003460426.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288943991|gb|ADC71690.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 305

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 113/324 (34%), Gaps = 61/324 (18%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   ++  N+  +W I Y D +T+L+AFF+VM+ I++ DD   + + +           
Sbjct: 3   RRKRHEEAENH-EAWAIPYGDLVTLLLAFFVVMYAISSVDDGKYRVLSESLVDAF----- 56

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                          +  +++G     ++    E       + Q
Sbjct: 57  --------------------------RAPAQTDPIQVGEPTVSREQSLDEMRALVPIDVQ 90

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                                  D   +        L   +       K  + L ++A +
Sbjct: 91  PG-------------------IVDDGVAPIDMAFSGLLDDAGTDDELQKFLEALAEVADE 131

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   ++ L+ D     +        + I I  +    +F   S+   PE   +L ++G +
Sbjct: 132 LEMAMAPLIEDG---DLRVSREAYWLEIEITSRL---LFGSGSATLNPEARSLLDEVGAI 185

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           LA     + + GHTD  P +      NW LS  RA +   V   +G+    +  + G+  
Sbjct: 186 LAPRVSRVHVEGHTDNVPIQTAVYPSNWELSSGRAAAVVSVFEDAGIEPKNLVAL-GYGE 244

Query: 318 HRLKIASDPM--NSANRRIDILVE 339
           HR   ++D     + NRR+ I+V 
Sbjct: 245 HRPVASNDTEQGRAENRRVAIVVL 268


>gi|330445280|ref|ZP_08308932.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489471|dbj|GAA03429.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 292

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 107/313 (34%), Gaps = 39/313 (12%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD  T+LM FF+++   +  D    K I               K  F  QN  E +
Sbjct: 1   MATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAFGVQNMLEVN 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    I +       +        ++     +  + +                +   
Sbjct: 50  DIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHEGDSDRAGGTQRDAGNLTG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G+    +T+  ++  +E +                 K    L + ++  L   ++D    
Sbjct: 110 GQSKKTATENNENEQEELD-----------------KMQNQLKEVLTKALEREISDK--- 149

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +  E     ++I I ++     F + S+   P+   ++++I  ++     +I + GHT 
Sbjct: 150 VIEIENLGQQVVIRIREK---GAFPEGSAFLQPKFKPLVRQIALLVKDVPGIIRVSGHTA 206

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNS 329
                +   R NW LS  RA S  Q + K  G    ++ ++ G A       +      +
Sbjct: 207 NDQMDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHTKM-RVVGLADTAPIADNKTKEGRA 265

Query: 330 ANRRIDILVEDRQ 342
            NRR++I +   +
Sbjct: 266 KNRRVEISIMQGK 278


>gi|188533603|ref|YP_001907400.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
 gi|188028645|emb|CAO96507.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99]
          Length = 343

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 71/334 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + ND+ I++ K+   +    + GSWKI YADFMT +MAFFLVMW+I+ +       I  Y
Sbjct: 2   KHNDRPIVLVKRKKANKHSGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +T  +   D  +P              +  T+   +++ G            
Sbjct: 62  FKTPLKVAITGGQRSSDSSSPIPGG---------GQDPTEKIGEVRKG------------ 100

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                            D+     K +   L  L +     ++ 
Sbjct: 101 --------------------------------FDMNVQKRKLDEVRLNRLRENLDQLIEA 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   +  +V + +   +             ID +N PMF   S+      
Sbjct: 129 DPKLRALRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGSAEVESYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  +L      IS+ GHTD  P+        NW LS DRA ++ + L+  G+S 
Sbjct: 173 RDILRAIAPILNQIPNRISMAGHTDDFPYAGGERGYSNWELSADRANASRRELVAGGLSS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            ++ ++ G +           ++ NRRI +LV +
Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266


>gi|285018158|ref|YP_003375869.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
 gi|283473376|emb|CBA15881.1| probable flagellar motor protein [Xanthomonas albilineans]
          Length = 317

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/327 (17%), Positives = 102/327 (31%), Gaps = 62/327 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    D   N  +W I YAD MT+L+AFF+VM+ ++  +    + +    N         
Sbjct: 3   RKHFQDEHTNHEAWAIPYADLMTLLLAFFVVMYALSTVNAAKYRVMANAMNAAF------ 56

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                                       +    +++G    + Q       I        
Sbjct: 57  ------------------------GGTAQTMHPVQVGEQPLQGQSDARATPI-------- 84

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                       N+     LP  +       + ++  Q L +  
Sbjct: 85  -----------------QSSPALSILDPNRLPATSLPRPADALRDEQQLRRAQQQLDRIA 127

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               S L      K +    +   I + I       +F   S+         L ++ ++L
Sbjct: 128 ERLDSALSPLIQKKLITVHRSGLWIEVEINSD---ILFGSGSATLDQSAHATLAQLAQIL 184

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A     + + G+TD +P        NW LS  RA S   +    G+   R+S I G+   
Sbjct: 185 ASVPNGVRVEGYTDNTPIATAQFPSNWELSAARAASVVHLFADQGLQPSRLSMI-GYGQF 243

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQG 343
           R   ++D  +    NRR+ +++    G
Sbjct: 244 RPHASNDTASGRNANRRVVLVILADSG 270


>gi|73539429|ref|YP_299796.1| flagellar motor protein MotB [Ralstonia eutropha JMP134]
 gi|72122766|gb|AAZ64952.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 325

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 67/335 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            + + II+++       P+   SWKI YADFMT +MA FLV+W++++ +  T + I +YF
Sbjct: 5   NDMRPIIVRR-AKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  +   +      +                                         
Sbjct: 64  RMPLKVAVVGGERSSQTPSVIPGGG----------------------------------- 88

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                          + + +D E  +        E+  N+ +        +       R 
Sbjct: 89  --------------MDVMRKDGEVMRAHDNDPSAEQRRNEFQEA------QRLRALKNRL 128

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +++ +    +      L+ D   +G+          I I+D +N PMF    +   P   
Sbjct: 129 EQIIENNPMLKQFRPQLLLDITSEGLR---------IQILDTQNRPMFRTGRAEVEPYMR 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L++IG V+      +S+ GHTD++ + N      NW LS DRA ++ + L+  G+ E 
Sbjct: 180 AILREIGPVINDLPNKVSLSGHTDSANYSNGERTYSNWELSSDRANASRRELIAGGMQEG 239

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A       SD +   NRRI I+V +++
Sbjct: 240 KVLRVLGLAATMPLDKSDLLAPVNRRISIVVLNQK 274


>gi|156933520|ref|YP_001437436.1| flagellar motor protein MotB [Cronobacter sakazakii ATCC BAA-894]
 gi|156531774|gb|ABU76600.1| hypothetical protein ESA_01340 [Cronobacter sakazakii ATCC BAA-894]
          Length = 310

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 70/335 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N   +I+KK+        + GSWKI YADFMT +MAFFLVMW+I+ +       I +YF
Sbjct: 4   SNHPVVIVKKRKHKGHGGGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELTQIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  +T    I D ++P      +      +    + ++D                 
Sbjct: 64  RTPLSAAITGGHRIADSESPIPGGGDDVTQSQGEVKKQEPNID----------------- 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                              +   + E   L  L  +    ++  
Sbjct: 107 -----------------------------------ELKKRMERNRLQKLRGDLDQLIEAD 131

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L+ L   +   L   V + +   ++    R              MF   S+   P   
Sbjct: 132 PKLRALRPHLRIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMR 175

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  VL      +S+ GHTD  P+ N      NW LS DRA ++ + L+  G+ + 
Sbjct: 176 DILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSNWELSADRANASRRELVIGGLDDG 235

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A            + NRRI +LV ++Q
Sbjct: 236 KVLRVVGMAATMRLAEKGANEALNRRISLLVLNKQ 270


>gi|320178162|gb|EFW53139.1| Flagellar motor rotation protein MotB [Shigella boydii ATCC 9905]
          Length = 308

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 73/336 (21%), Positives = 119/336 (35%), Gaps = 71/336 (21%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +     II+ K+          GSWKI YA FMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYAGFMTAMMAFFLVMWLISISSPKELIQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F       +T    I + ++P      +      + +   N  +LK              
Sbjct: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                   + E   L  L  +    ++ 
Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDIDQLIES 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +L+ L   +   L   V + +   ++    R               F   S+   P  
Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+  
Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268


>gi|16125820|ref|NP_420384.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
 gi|221234581|ref|YP_002517017.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
 gi|13422964|gb|AAK23552.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
 gi|220963753|gb|ACL95109.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
          Length = 298

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 47/312 (15%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MW++N T  + K+ I  YF P   +                
Sbjct: 26  AWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYFAPASISS--------------- 70

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                          T +     +G T+      + +  +  +              + S
Sbjct: 71  ---------------TTSGSGGILGGTSLGDDGAKADGKLSVVQQMAPEAQDVTKEAQSS 115

Query: 152 EKGKDLCKSTDL-EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           E       S      ++ K+E       ++    +++    L +L+K+I           
Sbjct: 116 ETANLDSASEQALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQI----------- 164

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
                L + T  G+ I ++DQ    MF ++S  P     V+L+ + +V+      ++I G
Sbjct: 165 -----LIDQTPEGLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPNRVTISG 219

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           HT A+ F      +W LS  RA ++ QVL  +GV +DR+ ++SG A+     A DP  + 
Sbjct: 220 HTSANAFGKKQDGDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAG 279

Query: 331 NRRIDILVEDRQ 342
           NRRI I++   +
Sbjct: 280 NRRISIVLLREK 291


>gi|167647023|ref|YP_001684686.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167349453|gb|ABZ72188.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 299

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 44/311 (14%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MW++N T  + K+ I  YF P   +  T+  G         
Sbjct: 26  AWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYFAPASISSSTSGSGGILGGTSLG 85

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                                 K     Q      L+                       
Sbjct: 86  DDGAKADGKMSVIQQMAPEAPDKTTKDGQSSTSASLD----------------------- 122

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                      L  ++ K+E       ++    +++    L +L+K+I            
Sbjct: 123 -----SASEEALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQIM----------- 166

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                 + T  G+ I +IDQ    MF ++S  P     ++L+ I +++      I+I GH
Sbjct: 167 -----IDQTPEGLRIQLIDQDGRSMFKENSREPNDRARILLRAIAKIINQLPNRITISGH 221

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           T AS     A  +W LS +RA ++ QVL  +GV EDRI ++SG A+     A DP  + N
Sbjct: 222 TSASAAGKRADSDWALSAERADASRQVLRGAGVDEDRIYQVSGKANSEPLYADDPTLAGN 281

Query: 332 RRIDILVEDRQ 342
           RRI I++   +
Sbjct: 282 RRISIVLLREK 292


>gi|189426486|ref|YP_001953663.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
 gi|189422745|gb|ACD97143.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
          Length = 280

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 108/326 (33%), Gaps = 67/326 (20%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   N   W + Y DF+T+L A F+ M+ +  TD    + + Q             
Sbjct: 4   KREPEKHANHERWLVSYGDFLTLLFAVFVAMYAMGQTDKKKAEELTQSLRESFGY----- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                               S  +     S D+K     + +       +    +  +Q 
Sbjct: 59  ----------------STQASAGQKGVLQSHDIKPIPAIKPEMAVIPITDRMPPAGPRQG 102

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                + +R                                           ++  +  S
Sbjct: 103 NVGGGAGSRQMAGE--------------------------------------KEFREMAS 124

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  + LV       V    T+ G++IS+ +      FD  S+    E+I  L+ I + L+
Sbjct: 125 AIEAYLVKQGFQNKVALSITQRGLVISLKEA---GFFDSGSAKLKSESIQTLRGIADTLS 181

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                  + GHTD+ P R+     NW LS  RA +    L+  +G S + +S + G+   
Sbjct: 182 RYANRFRVEGHTDSMPIRSTEFRSNWELSTARATNVIHFLIDSAGFSPESLSAV-GYGEF 240

Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342
           +  + +      + NRR+DI++   +
Sbjct: 241 QPVVDNSTAEQRAKNRRVDIVLLADE 266


>gi|260598378|ref|YP_003210949.1| flagellar motor protein MotB [Cronobacter turicensis z3032]
 gi|260217555|emb|CBA31774.1| Chemotaxis protein motB [Cronobacter turicensis z3032]
          Length = 310

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 70/335 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N   +I+KK+        + GSWKI YADFMT +MAFFLVMW+I+ +       I +YF
Sbjct: 4   SNHPVVIVKKRKHKGHGGGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELTQIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  +T    I D  +P      +      +    + ++D                 
Sbjct: 64  RTPLSAAITGGHRIADSDSPIPGGGDDVTQTQGEVKKQEPNID----------------- 106

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                              +   + E   L  L  +    ++  
Sbjct: 107 -----------------------------------ELKKRMERNRLQKLRGDLDQLIEAD 131

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +L+ L   +   L   V + +   ++    R              MF   S+   P   
Sbjct: 132 PKLRALRPHLRIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMR 175

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  VL      +S+ GHTD  P+ N      NW LS DRA S+ + L+  G+ + 
Sbjct: 176 DILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSNWELSADRANSSRRELVIGGLDDG 235

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A            + NRRI +LV ++Q
Sbjct: 236 KVLRVVGMAATMRLAEKGANEALNRRISLLVLNKQ 270


>gi|21244419|ref|NP_644001.1| flagellar motor protein MotB [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110081|gb|AAM38537.1| chemotaxis MotB protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 380

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|307824077|ref|ZP_07654304.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307734861|gb|EFO05711.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 302

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 61/335 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           + Q II+KK        ++ G+WK+ YADF+T +MAFFL+MW++  T +           
Sbjct: 3   DQQPIIVKKVKKGGHA-HHGGAWKLAYADFVTAMMAFFLLMWLLGTTSE----------- 50

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                     KGI +    P ++S  +  L + +  +         ++  + Q  +    
Sbjct: 51  -------PERKGIAEYFQDPFKASTEERGLDVGDRTSIIQAGGSDITSQDQGQVDK---- 99

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                  EE    P   + K   ++++K
Sbjct: 100 -----------------------------------GKTAEEVEITPEEIEHKAEELEKEK 124

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
                 K      S    +   + +  E T  G+ I I+D +N PM+  +S+   P+  +
Sbjct: 125 LENLKQKIQYKIDSTPELNEFKEQIKLEITSEGLRILIVDAQNRPMYKLASAETEPQIKL 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ +  V+      +S+ GHTDA PF        NW LS DRA +A   L ++G++E++
Sbjct: 185 ILRALAPVINELPNKVSLNGHTDARPFPPNQKKYTNWELSSDRANAARYELNQAGLAEEK 244

Query: 309 ISKISGFAHHRLK-IASDPMNSANRRIDILVEDRQ 342
           I ++ G +        ++P++  NRRI I+V +++
Sbjct: 245 ILRVIGLSSSVPYSATAEPLDPINRRISIIVMNKK 279


>gi|330447921|ref|ZP_08311569.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492112|dbj|GAA06066.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 332

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 113/331 (34%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + I+ K+        ++ G+WK+ +ADFM  LMA FLV+W++          +     
Sbjct: 3   KTEHIVFKRAAKRHSNEHHGGAWKVAFADFMIALMALFLVLWLM---------QVVDQQE 53

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                    S  +FDE       + N +                                
Sbjct: 54  RKAIVAYVNSASVFDEGAGNPFDTANSLSPIDFG-------------------------- 87

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                E       +  +      + N   P        + + + 
Sbjct: 88  --------------------GEAADLSSHNAAMTIKSFFDGNGDGPERDALIPGSFETQA 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LA  +  T   + A      +  + T  G+ I + D     MF + S+   P    
Sbjct: 128 QLAVLASVVEETAKQVSAQG---NISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           VL  I  +    +  + I GHTDA+ F++      NW LS  RA  A Q L+  G+  +R
Sbjct: 185 VLLNIAPIFKQISNSLIISGHTDATQFKSKFSRSTNWELSSSRANVARQTLIAGGMPSNR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G A   L     P  S NRRI++ + 
Sbjct: 245 VLQVAGMAERALLNKQSPDASENRRIELFIL 275


>gi|294624638|ref|ZP_06703310.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601073|gb|EFF45138.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 383

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|294667303|ref|ZP_06732523.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602975|gb|EFF46406.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 387

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           KRL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 KRLEALMQDLREAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|78049371|ref|YP_365546.1| flagellar motor protein MotB [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325926421|ref|ZP_08187746.1| flagellar motor protein [Xanthomonas perforans 91-118]
 gi|78037801|emb|CAJ25546.1| flagellar motor protein MotB [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325543210|gb|EGD14648.1| flagellar motor protein [Xanthomonas perforans 91-118]
          Length = 385

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    +II++   +    ++ G+WK+ +ADF+T +MAFFLV+W++ AT  + + AI +YF
Sbjct: 3   EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                                        + S     +        G         +L  
Sbjct: 63  R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +     K     D++                                  K K
Sbjct: 95  TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125

Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L + +   +      +     +L + T  G+ I I+D++N PMFD       P T
Sbjct: 126 RRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
           + +L+++   +      ISI GHTD + + + A   NW LS DRA +A + L+  G+S+ 
Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++++ G +   L   +DP N  NRRI I+V 
Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277


>gi|149909329|ref|ZP_01897985.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
 gi|149807646|gb|EDM67594.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
          Length = 290

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 67/311 (21%), Positives = 109/311 (35%), Gaps = 36/311 (11%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K I                  F  QN  E  
Sbjct: 1   MGTFADLMSLLMCFFVLLLSFSEMDVVKFKQIAGSMQ-----------HAFGVQNQIEVK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           +  K    I +       D     T  +      E  + +     Q+   KN L  DS  
Sbjct: 50  NIPKGTTVIAQEFRPGRPDPTPIETIMQHTIDNSEAELDFKDGEDQNAGGKNKLAEDSNG 109

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           GK    ST         E                     +D ++ + +    L  +    
Sbjct: 110 GKSPETSTRDNTPTQNIEVT-------------------EDTSELVKALAEALKEEIDSG 150

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
           GV  E     I+I I ++     F   S+   P    V+QK+ ++LA    +I+I GHT 
Sbjct: 151 GVEVENLGQQIIIRINEK---GSFPSGSAFLQPRFRPVIQKVAQLLATIPGIITIAGHTG 207

Query: 274 ASPFRNI-ARDNWRLSLDRAYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
                +   R  W LS  RA S   ++L     +E+R+  + G A  +     +     N
Sbjct: 208 KEQLHSELYRSKWDLSSQRAVSVAHEMLKVKEFTENRLI-VQGMADTQPLTDDENELRRN 266

Query: 332 RRIDILVEDRQ 342
           RR++I +   +
Sbjct: 267 RRVEISIMQGK 277


>gi|294084383|ref|YP_003551141.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663956|gb|ADE39057.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 384

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 120/364 (32%), Gaps = 52/364 (14%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD  T+LMAFF+++      +    K I                    
Sbjct: 20  PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLKNAFGVQRTVPIVEQP 79

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  +    +P    S            T+  +D+K    +          +I      
Sbjct: 80  KGTTILSLNFSPNPAPSATNQMNQETTKDTQPDLDIKNKDKDDDGGDLDNAEDIVKALED 139

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL----- 192
             +       +   +   +   +   E+++ +     L  + + K  A K +  +     
Sbjct: 140 AIARGEIEVESLGEKVIVNFTPTNAPEENMPQLLKETLNAIEQAKDAAGKAEAEVLFGGL 199

Query: 193 -QDLAKKI--------------------------SSTLSGLVADNIVKGVLFETTRTGIL 225
            Q L K +                           +  + +  D +   +  E  +  + 
Sbjct: 200 EQQLEKMLAAAESASASQSQSEAEEAEAQEQQEKQNAQAAIAEDELKVALRQEIGQGLVT 259

Query: 226 ISIIDQR------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--F 277
           +   + R      +   F   S+        ++Q+I EV A  +  I++ GHTD  P  F
Sbjct: 260 VEREEDRVLITVGSGGAFASGSAELTDSAREIMQQIAEVSAGGSSSINVSGHTDNVPLIF 319

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            +  RDNW L+  RA S  Q L  SG V  +R+  +S F       ++D       NRRI
Sbjct: 320 GSQFRDNWDLAAARASSVVQALEDSGQVPGNRMQAVS-FGESMPLESNDTAEGRALNRRI 378

Query: 335 DILV 338
           +I +
Sbjct: 379 EIEI 382


>gi|241761142|ref|ZP_04759231.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374761|gb|EER64222.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 326

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 59/340 (17%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M    +KN+   + II+KK +      ++ G+WK+ YADF+T +MAFFL++W++      
Sbjct: 1   MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLL------ 54

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                       G       KGI D  NP                       L   S   
Sbjct: 55  ------------GATNEKERKGIADYFNP----------------------SLTPESAAG 80

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                         +      H K +        K+                        
Sbjct: 81  SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           ++I+    ++R + L + +   +        + + V    TR G+ I ++DQ +  MF  
Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
            +   +P    ++ ++  V+     +I +RGHTDA P+ +    +NW LS  RA +  + 
Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L+  GV  +R  +I G A     +  + M+  NRR+ I +
Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283


>gi|254473231|ref|ZP_05086629.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
 gi|211957952|gb|EEA93154.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
          Length = 286

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 111/322 (34%), Gaps = 51/322 (15%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                P     W + +AD M++L+ FF+++   +  D    + +                
Sbjct: 4   RKKQAPAGAPGWMVTFADLMSLLVCFFVLIISFSVQDKQKLQVVAGSIK----------- 52

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
                            D    + +TK +  L+I     +   + +            +E
Sbjct: 53  -----------------DAFGIKQVTKRAGVLEIEGVPLRDFMKDITYEKQITDADFATE 95

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +  E      K  D+EK             +     A +    + +++  I  
Sbjct: 96  SHPEKRKQGPEANTHTTKKADIEKPRQ------FATAAVSLRQAFQEMPEITEISNNI-- 147

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                         + E T  G+ I I+DQ    M+ + S  P   T  +L K+  VLA 
Sbjct: 148 --------------ILEETDEGLNILIVDQEGRSMYPEGSKYPYEITRRLLAKMAPVLAK 193

Query: 262 STEVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               + I GHT       + +   W LS DRA +A Q+L + G+  + I  + G A    
Sbjct: 194 LPNRVRITGHTTTGQLITSPSETGWELSADRANTARQILSEYGLPSNNIHSVVGKADTEP 253

Query: 321 KIASDPMNSANRRIDILVEDRQ 342
              +DP  +ANRRI IL+   +
Sbjct: 254 LFPNDPYLAANRRISILLMAEE 275


>gi|90415360|ref|ZP_01223294.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
 gi|90332683|gb|EAS47853.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
          Length = 408

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 122/359 (33%), Gaps = 50/359 (13%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP-------FGKNLMTASK 81
              +W   +AD  T+LMAFF+++      +    K +    N                ++
Sbjct: 54  GAPAWMATFADMATLLMAFFVLILSFAHMNVPKYKEVSGSMNQKFGVQKIVPVVEQPTAE 113

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
            +  +Q    +     +D+  ++   +   +        KK      ++   L  S   E
Sbjct: 114 NVIAKQYKTAKVDPTLLDVIQEQTTAERQPEDVELKDKLKKNKSSTNSDAEVLKKSLAKE 173

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK-------------- 187
             +  +    +  K + +     KS  + E+      +K     ++              
Sbjct: 174 IAEGKVKVTIKDKKLVVEVVSEAKSGKQGEDRKSKSGAKLLQSDLEVYAKVASAQAQVAS 233

Query: 188 --------------------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
                                +   Q +A +     + L  +        +     I++ 
Sbjct: 234 QVQVIDASPESLDGDLSGRGSQAGEQAIADQYEKIRARLSNEIAEGLAEVDRDGDKIVVR 293

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNW 285
           + ++     F    +   P    +L K+GE +   + +I+I GHTD  P  F    R NW
Sbjct: 294 LAER---GSFRSGYADLQPSFKPLLDKVGESITDGSSLITIEGHTDNIPMAFSERFRSNW 350

Query: 286 RLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            LS  R+ +    L+ S  + + R+  ++G A  +  + +D       NRRI+++++  
Sbjct: 351 DLSAARSAAVADYLLNSSEIDDGRV-SVTGLADTKPLVPNDSPEGRSKNRRIEVIIDGS 408


>gi|229543005|ref|ZP_04432065.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
 gi|229327425|gb|EEN93100.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
          Length = 274

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 69/330 (20%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           KK+    +   N  +W + Y+DF+T+L+A F+V++ +++ D    +   +  N       
Sbjct: 3   KKRKKRQEEEGNSEAWLLPYSDFLTLLLALFIVLFAMSSIDAQKFQKFSKVLNGVFV--- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                 FD          +  D                                      
Sbjct: 60  -GGTSFFDYTKQTSGDDNSTSDT------------------------------------E 82

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +  E  KN   ++ +   +  KS     + N                  +   +L++  +
Sbjct: 83  KFLEQKKNDAQKNGDSTTNGSKSNSTTDASNG-----------------QGDAQLKETQQ 125

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           +I++ ++    + +        T  G+LI+I D     +FD   +    E I   + +  
Sbjct: 126 RINTYIAH---NKLEGKFETSLTGEGLLITIRDN---VLFDSGKAEVRKEDIKTAKALSN 179

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISG 314
           +L       I + GHTD  P  N   + NW LS+ RA +  ++ L    ++  +     G
Sbjct: 180 LLVMDPPRSIIVSGHTDNVPIHNSVFQSNWDLSVMRATNFLKIILENKNLNP-KYFSAKG 238

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           +  +    ++D     + NRR+++L+  + 
Sbjct: 239 YGEYHPIASNDTQGGRAKNRRVEVLILPKN 268


>gi|254492051|ref|ZP_05105228.1| OmpA family protein [Methylophaga thiooxidans DMS010]
 gi|224462748|gb|EEF79020.1| OmpA family protein [Methylophaga thiooxydans DMS010]
          Length = 297

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 107/326 (32%), Gaps = 66/326 (20%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                    L ++   +AD M++LM FF+++      D    K + +             
Sbjct: 6   QRTKRDAEGLPAYMATFADLMSLLMCFFVLLLSFAEMDALKYKMVVKSLE---------- 55

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
              F  Q     +   K    I +  +            ++         +    +++  
Sbjct: 56  -NAFGVQREVAANEIPKGTSIIAQEFSPGEPKPTPLKVVRQDTMDDSREQLKVTMDAE-- 112

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                                      LA ++ +++ +  +K  
Sbjct: 113 ------------------------------------------KLAEQQAQQVAEETQKFK 130

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   + + +   ++ E+  + I+I I ++     F    +    + I +L+KI  VL 
Sbjct: 131 EALEKEIEEGL---IVVESQYSRIVIRIREK---GSFMSGDARLNNDFIPILKKIHNVLL 184

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318
            +   I++ GHTD  P        NW LS  RA S    L+  G +  +R   + G+A  
Sbjct: 185 KTDGRIAVAGHTDDVPINTSRYRSNWELSTSRATSVVHELLAPGDMPAERFV-LEGYADT 243

Query: 319 RLKIASD--PMNSANRRIDILVEDRQ 342
           +    +D     + NRR++I+V    
Sbjct: 244 KPLEPNDSPTNRARNRRVEIIVLKSP 269


>gi|89100891|ref|ZP_01173740.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
 gi|89084378|gb|EAR63530.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
          Length = 269

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 125/328 (38%), Gaps = 66/328 (20%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K       +   SW I YAD +T+L+A F+V++ +++ D    +A+ + FN       
Sbjct: 3   KRKKKEHHEEHVDESWLIPYADILTLLLALFIVLFAMSSVDARKFEALSKAFNDAFN--- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
               G FD  +P                                        +    S  
Sbjct: 60  -GGTGFFDFPSP--------------------------------------MPDGAMQSAD 80

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +     K+ + + S  G       D+E              ++ KI  +  K+ L+++ +
Sbjct: 81  KADTENKDEVEKASAAGTLEEGQNDME--------------AEGKIQKLTDKQELKEVEE 126

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           K+ + +     + +   +    T  G+L++I D      F   S+      + +  +IGE
Sbjct: 127 KVKTYIQN---NGLTDKLETSLTDEGLLVTIRDN---VFFASGSAEVRSGELTIADEIGE 180

Query: 258 VL-AHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L       I I GHTD  P +N     NW LS+ RA +  ++L+ +   + R     GF
Sbjct: 181 LLVMDPPRNIIISGHTDNMPIKNSEFESNWELSVMRAVNFMKILLHNKDLDARAFSAKGF 240

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
              +   ++D       NRR++IL+  R
Sbjct: 241 GEFQPAASNDTKEGRDKNRRVEILILPR 268


>gi|260752895|ref|YP_003225788.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552258|gb|ACV75204.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 326

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 59/340 (17%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M    +KN+   + II+KK +      ++ G+WK+ YADF+T +MAFFL++W++      
Sbjct: 1   MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLL------ 54

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                       G       KGI D  NP                       L   S   
Sbjct: 55  ------------GATNEKERKGIADYFNP----------------------SLTPESAAG 80

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                         +      H K +        K+                        
Sbjct: 81  SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           ++I+    ++R + L + +   +        + + V    TR G+ I ++DQ +  MF  
Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
            +   +P    ++ ++  V+     +I +RGHTDA P+ +    +NW LS  RA +  + 
Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L+  GV  +R  +I G A     +  + M+  NRR+ I +
Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283


>gi|253575920|ref|ZP_04853254.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251844714|gb|EES72728.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 293

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 114/315 (36%), Gaps = 64/315 (20%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
             W I YAD +T+L+ FF++M+ ++  D +  + +        K                
Sbjct: 34  DRWMITYADLITLLLIFFVMMYAMSRLDVEKYEVVTSSLQQTFK---------------- 77

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
                             + ++L  G T    +Y          S S+Q E    +   D
Sbjct: 78  ---------------GGDSILELGSGITGTADRYSHKNPPASADSGSKQGEGQGTTGQAD 122

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           S                         PL++ ++   K+++ L +L K I S +     ++
Sbjct: 123 S---------------------SGQAPLTERELAFRKQEEELANLMKLIESYIKD---NS 158

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
           +   +       GI I++ D+    +FD   +     +   L K+  +      VISI G
Sbjct: 159 LEDQIHVADLPQGISITLSDR---FLFDTGKADLKSGSAKTLAKLASLFRQLDTVISIEG 215

Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP- 326
           HTD  P    +  +DNW LS  RA S  +  +    +   +  + +G+A  R    +D  
Sbjct: 216 HTDNLPIVYASEFKDNWELSGARALSVLRFFVDKEKLDPQQF-QYAGYADTRPAADNDTP 274

Query: 327 -MNSANRRIDILVED 340
                NRR++I V  
Sbjct: 275 EGRQKNRRVEITVLR 289


>gi|262273510|ref|ZP_06051324.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
 gi|262222488|gb|EEY73799.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
          Length = 340

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/334 (21%), Positives = 126/334 (37%), Gaps = 44/334 (13%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +    IIIKKK   D   ++ G+WK+ +ADF   +MAFF+V+WI+  T  + ++ I+  
Sbjct: 3   HDKQHVIIIKKKKHGDHDDHHGGAWKVAFADFAIAMMAFFMVLWIMEITSKEEREEIQYR 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                  +  +   +FD +N P                                +    E
Sbjct: 63  LQQ--STIFESIDNLFDIRNSPFPIDFG-------------------------GEASPFE 95

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           N I    +                +  +     +   S+ + +      LS   I   + 
Sbjct: 96  NPINSTLSGTSELGNSLHEQVPQGEKGNNAGQGENAMSVMEGQYLNAAQLSGLAIALKEI 155

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L  +                   +  +    G+ I I D +   MF + S+   P  
Sbjct: 156 VASLDAMEN-----------------IHLDVVPQGLRIQIQDSKRNVMFQRGSAQMTPFF 198

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +L  +   L      + I GHTD++ F   A  NW LS DRA  A QV++ SG+ + +
Sbjct: 199 EDILYALSPKLGKIQNRLIISGHTDSTVFSTQAYSNWELSGDRALKARQVMVGSGLPQQQ 258

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++   A   L   +DP +  NRRI+I+V  ++
Sbjct: 259 VLQVVAMADRTLLDEADPQSGKNRRIEIMVLTKE 292


>gi|192359644|ref|YP_001981667.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
 gi|190685809|gb|ACE83487.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
          Length = 333

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 86/336 (25%), Positives = 145/336 (43%), Gaps = 60/336 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +   Q +IIKK+       ++  SWK+  ADFMT +MAFFL+MW++  T ++ KKAI QY
Sbjct: 2   ERGAQPLIIKKRKGRGH-GHHGSSWKVALADFMTAMMAFFLLMWLLGGTTEEEKKAISQY 60

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F   G   +                              +   DL + + ++  Q  + E
Sbjct: 61  FQDPGSQYVIG----------------------------EGGADLGLINQDRPIQQSQAE 92

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            +    +N+Q+       +T D  K +                                 
Sbjct: 93  QDTMETANTQEFTQDDQEVTEDKIKREM----------------------------ERIE 124

Query: 189 KKRLQDLAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            ++LQ+L +++ + ++ L  V   I   +L + T  G+ I I+D+   PMFD  S+    
Sbjct: 125 NEQLQELKEQLETEINQLDSVFQQIKDQILIDFTALGLRIQIVDKDQRPMFDVGSANLKT 184

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +  VLQ +  +L      ISI GHTDA+P+  N    NW LS DRA +A + +++    
Sbjct: 185 YSKEVLQALAPILDKVPNKISITGHTDATPYGANATYTNWELSADRANAARRAMLEGSYP 244

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           E++++ + G       +   P+   NRRI I+V  +
Sbjct: 245 ENKVATVQGMGSVAPLLVDKPLEPINRRIAIIVLKK 280


>gi|254512283|ref|ZP_05124350.1| chemotaxis protein MotB [Rhodobacteraceae bacterium KLH11]
 gi|221535994|gb|EEE38982.1| chemotaxis protein MotB [Rhodobacteraceae bacterium KLH11]
          Length = 279

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 121/332 (36%), Gaps = 58/332 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   IIIKKK       ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K +  Y
Sbjct: 4   QTNVAPIIIKKKRVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTETQRKGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                          F    P    S         +++   +  +  GS    +     +
Sbjct: 64  ---------------FSPTIPLNPVSGGGDGAFGGDNMFSENTMVMDGSGASNRNPTEAK 108

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                     Q                                             A + 
Sbjct: 109 KARGSTGVDAQGGGKG----------------------------------------AFED 128

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L+  A+ +  T   LV+D ++K ++   T  G+++ +    + P+F+  S  P    
Sbjct: 129 FSSLE--AQLLGRTGESLVSDEMLKHIVTRVTDEGLVVELFSTEDQPLFESGSDKPTQMM 186

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +   +       T  I++ GH  ++P        W LS  RA    Q+L   GV   R
Sbjct: 187 RALTLLVARSSDLVTNSIAVEGHVRSAPVVLAHNPTWDLSTTRAQITRQLLQNKGVQPQR 246

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + +++G A     + + PM   N R++I+   
Sbjct: 247 LVRVAGHADREHALEN-PMAVRNDRVEIIFLR 277


>gi|89093474|ref|ZP_01166422.1| flagellar motor protein [Oceanospirillum sp. MED92]
 gi|89082164|gb|EAR61388.1| flagellar motor protein [Oceanospirillum sp. MED92]
          Length = 313

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 109/346 (31%), Gaps = 66/346 (19%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   ++ +                 P  L +W   + D M++LM FF+++   +  D  
Sbjct: 1   MSDDTEEQE-------------CPPCPPGLPAWLATFGDLMSLLMCFFVLLLSFSEMDVL 47

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             K +                  F  QN  +     K    I +  +    +    +  +
Sbjct: 48  KFKQLAGSMREA-----------FGVQNQIKVEDIPKGTSIIAQEFSPGRPEPTPLNEVR 96

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +                        ++  D        K  D +    +          +
Sbjct: 97  Q-----------------------MTVNNDMNTLDIRSKEGDSDSPDQEAGEQQELQKEQ 133

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           E+    +  +    LA++I      +  D     +                +    FD  
Sbjct: 134 EQEAKEEAVEFAAALAEEIGDGSVEVETDGKKIIIR--------------IKEKGSFDSG 179

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299
           S+    E+I VL KI +VL      +SI GH+D  P+       NW LS+ RA +    L
Sbjct: 180 SAELKFESIPVLAKIRDVLLDVKGNVSIEGHSDNIPYAGRRFESNWDLSVARALAVAHEL 239

Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                + + R   + G A  +  + +D       NRR++I+V   +
Sbjct: 240 FGDPRIDQSRFK-VLGMADTKPLVPNDTRANRVKNRRVEIIVTKGK 284


>gi|329895993|ref|ZP_08271251.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC3088]
 gi|328922074|gb|EGG29437.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC3088]
          Length = 354

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 51/356 (14%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD-------- 85
              +AD  T+LMAFF+++      +    K +    N                       
Sbjct: 1   MATFADMATLLMAFFVLILSFAEMNVPKFKDVSGSMNDSFGVQRKVPVVEPPLSDSVIAK 60

Query: 86  --EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI------------ 131
              Q   + ++ + I     + +     +L+  +             +            
Sbjct: 61  QFSQAKVDTTALSVIQEQTTDELQPEDAELRTTTKPSDATLGSDIEKVRAALSEEIARGL 120

Query: 132 -------------------FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
                                L + ++S      L +D+            +     E  
Sbjct: 121 VEVVQENEKISVITKAASNEGLESGEESTQRGRQLDQDTISLFAKVADAQTQVVSEIEIR 180

Query: 173 YFLPPLSKEKILAMKRKKRLQDLA---KKISSTLSGLVADNIVKGVLFETTRTGILISII 229
              P  S E   +        +       +      L  +     V  E  +  I I++ 
Sbjct: 181 DSSPSDSAESAQSQANAPAPPEDDIGDSDLEQIRQNLAPEISRSLVNVEMDQDQIKITLA 240

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRL 287
           DQ     F   S+   PE + +L ++G+ ++ +  V+++ GHTD+ P  F    + NW L
Sbjct: 241 DQ---GAFVSGSADLRPEFLQLLNRVGDSISDTDGVVTVSGHTDSIPMAFSMRFKSNWDL 297

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           S  R+ S    L+  G   D    + G+A       +D     + NRRI+I+++ +
Sbjct: 298 SAARSASVADYLITQGYLGDIEVSVQGYADTVPIATNDTAEGRAKNRRIEIMIDKK 353


>gi|296103598|ref|YP_003613744.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058057|gb|ADF62795.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 301

 Score =  157 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 119/330 (36%), Gaps = 72/330 (21%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            +II +K       ++ G+WKI YADFMT +MAFFLVMW+++ + D  ++ I  YF    
Sbjct: 6   PVIISRKRKKKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLSQSTDMERELIADYFRMPL 65

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           K  M          +       +                                     
Sbjct: 66  KPSMANGDKTSLSDSVIPGGGDDI------------------------------------ 89

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                        L R  E  K    S D  K     +        ++    ++   RL 
Sbjct: 90  -------------LKRQGEVFKGQIASIDKHKRFESLKQAK-----EKLQKMIETDPRLN 131

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           +    I   L  L  D ++  +     R    +              S +P      +LQ
Sbjct: 132 NFKSNI---LLNLTNDGLLIQITDSQDRPMFRV-------------GSELPESYMNGILQ 175

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  +L      +S+ GHTD+ P+        NW LS  RA +A +VL++ G++++R  +
Sbjct: 176 ALVPLLQELPNALSLTGHTDSLPYAGGDGGYSNWELSAGRANAARRVLVRGGLNDERFLR 235

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + G A       + P ++ NRRI ILV  R
Sbjct: 236 VIGTASRMPLENTSPDSAVNRRISILVLSR 265


>gi|261340281|ref|ZP_05968139.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
 gi|288317370|gb|EFC56308.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
          Length = 309

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +I+KK+        + GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 5   SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                 +T  + I +  +P      +      +     N  +LK                
Sbjct: 65  TPLATAVTGGQRISNSDSPIPGGGDDYTQQKGEVKKEPNIDELK---------------- 108

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E   L  +  +    ++   
Sbjct: 109 -------------------------------------KRMEQARLKKVRGDLDQLIEADP 131

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+ L   +   L   V + +   ++    R               F   S+   P    
Sbjct: 132 KLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FKTGSAEVEPYMRD 175

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+ I  VL      +S+ GHTD  P+ N      NW LS DRA ++ + L+  G+ + +
Sbjct: 176 ILRAIAPVLNGIPNRVSLSGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDDGK 235

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A         P ++ NRRI +LV ++Q
Sbjct: 236 VLRVVGMAATMRLTDRGPDDAINRRISLLVLNQQ 269


>gi|256376462|ref|YP_003100122.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
 gi|255920765|gb|ACU36276.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
          Length = 295

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 115/330 (34%), Gaps = 61/330 (18%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   ++   +   W + YAD +T+LM  F+VM+ +++ D    + +++          +
Sbjct: 7   RKNKHEEQHVHDERWMVTYADMITLLMVLFIVMFAMSSVDSQKFQELKKSL----AGAFS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            S  I         S+   I+    +  ++ S        + K                 
Sbjct: 63  GSDHITVFGAGGAGSANGGINPDPVDLKSEASGSGSTQDLSSK----------------- 105

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                                      +    +       +K    A    + L++L ++
Sbjct: 106 --------------------------AAQEAVQQADRQKAAKNLKAAEAEVQHLKELGEQ 139

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++  L         +  + +       + +     + +F    +  LP+   ++  +  V
Sbjct: 140 MAKQLQDQGLGGTAQFRVDDRG-----LVVTVVTTSVVFAGDRAELLPDGQRIVDALAPV 194

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
           L      + + GHT+  P        +W LS  RA S  + L++  G++ DR++ + G+A
Sbjct: 195 LKSVGNRVEVDGHTNQLPVATVNYPSSWELSTARASSVVRYLIERDGLASDRLTAV-GYA 253

Query: 317 HHRLKIASDPMNSA----NRRIDILVEDRQ 342
             R     DP +      NRR++++V   Q
Sbjct: 254 DTRPLY--DPADPRSVTGNRRVEVVVLSDQ 281


>gi|258624680|ref|ZP_05719615.1| chemotaxis LafU protein [Vibrio mimicus VM603]
 gi|258583072|gb|EEW07886.1| chemotaxis LafU protein [Vibrio mimicus VM603]
          Length = 315

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+        +  G+WKI  ADFM  LMA FLV+W++   + D +KAI  + N
Sbjct: 3   RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +     FD  N     S + IDL+ D  +        + S+  +      E+N
Sbjct: 63  SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGDGPESN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                N                                                  + ++
Sbjct: 117 SLIDGN-------------------------------------------------FETQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK +   +  + A      V    T  G+ I + D     MF +  S   P    
Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       I I GHTD+ PFR       NW LS  RA  A + L+  G+  +R
Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKALVDGGMPAER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L   + P +S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275


>gi|94500546|ref|ZP_01307077.1| flagellar motor protein [Oceanobacter sp. RED65]
 gi|94427336|gb|EAT12315.1| flagellar motor protein [Oceanobacter sp. RED65]
          Length = 331

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 112/319 (35%), Gaps = 43/319 (13%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
            L +W   + D M++LM FF+++      D    K +                  F  Q 
Sbjct: 15  GLPAWLATFGDLMSLLMCFFVLLLSFAQMDAQKFKRLAGELR-----------MAFGVQT 63

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
                   K    I +H + +  +    +  ++K     ++++  L     +   +    
Sbjct: 64  TIRADDPPKGTSVIAKHFSPSIPEPTPINEIRQKTSDVTQSSLEVLCQDAITAQTEAKGN 123

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              +  +                         +K  A + ++   +LA ++   +S    
Sbjct: 124 TGKQTREITVPKES----------------ESQKKQAEQAEETAFELATELEREIS---- 163

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 V  ET  + I+I I ++     F+   +    E + VL  I EVL      IS+
Sbjct: 164 ---KGQVELETQGSKIVIRIREK---GSFNAGGAYVEDEFLPVLDTIREVLVEVPGRISV 217

Query: 269 RGHTDASPF--RNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASD 325
            GHTD++P         NW LS  RA +  + L +   + E R  ++ G    R    + 
Sbjct: 218 EGHTDSTPLGRGGRYNSNWELSAARAAAVAEYLFIAPEMPESRF-RVVGHGSVRPVAENK 276

Query: 326 PM--NSANRRIDILVEDRQ 342
                + NRR++I+V   +
Sbjct: 277 TAEGRAKNRRVEIIVLRSK 295


>gi|262173363|ref|ZP_06041040.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
 gi|261890721|gb|EEY36708.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
          Length = 315

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+        +  G+WKI  ADFM  LMA FLV+W++   + D +KAI  + N
Sbjct: 3   RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +     FD  N     S + IDL+ D  +        + S+  +      E+N
Sbjct: 63  SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGDGPESN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                N                                                  + ++
Sbjct: 117 SLIDGN-------------------------------------------------FETQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK +   +  + A      V    T  G+ I + D     MF +  S   P    
Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       I I GHTD+ PFR       NW LS  RA  A + L+  G+  +R
Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L   + P +S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275


>gi|254517028|ref|ZP_05129086.1| flagellar motor protein [gamma proteobacterium NOR5-3]
 gi|219674533|gb|EED30901.1| flagellar motor protein [gamma proteobacterium NOR5-3]
          Length = 286

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/313 (21%), Positives = 111/313 (35%), Gaps = 56/313 (17%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++      D +  K I               K  F  QN  E  
Sbjct: 1   MATFADLMSLLMCFFVLLLSFAEMDVEKFKQIAGSM-----------KVAFGVQNEFELE 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    +    +          T Q+   +  + ++       +    +         
Sbjct: 50  DIPKGTSVVATEFSPGQTSDTPIETIQQITDETTDPSLRVGDGEMEDAEVE--------- 100

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                            +      L++ +  A K K  L+D  +                
Sbjct: 101 --------------ELLQQKITALLAETQADAEKLKDMLEDETQT--------------G 132

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V  E+    I + I +Q     F   S+    + + V+Q+I + L      ISI GHTD
Sbjct: 133 KVDVESDGRTITVRIREQ---GSFPSGSANLNTDFVPVMQRIRDALVEIPGTISIEGHTD 189

Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           ++P R      NW LS  RA S    L++ G+ +D    + GFA  R    +D     ++
Sbjct: 190 STPLRGGRYESNWGLSSSRALSVTHELLRDGLLKDDRMMVVGFADTRPFTFNDTVEGRAS 249

Query: 331 NRRIDILVEDRQG 343
           NRR++I++  RQG
Sbjct: 250 NRRVEIVI--RQG 260


>gi|330951464|gb|EGH51724.1| flagellar motor protein MotB [Pseudomonas syringae Cit 7]
          Length = 351

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 67/336 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        +  G WKI +ADF T +MAFFLV+W++++   +   A+  YF
Sbjct: 2   ENNQPIIIKRVKRFGGGHH-GGGWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128
                          D     +  S   IDL     ++ N +++ ++ +T          
Sbjct: 61  K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         L   + E       
Sbjct: 103 ---------------------------------------------PLEAETAETKAEEVE 117

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P 
Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPY 177

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     +
Sbjct: 178 FEDILLALADTIKSVPNKISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPD 237

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 238 SQVARVVGYASSALYDHQNPTNPVNRRIDIVVLTKK 273


>gi|258622497|ref|ZP_05717519.1| chemotaxis LafU protein [Vibrio mimicus VM573]
 gi|258585197|gb|EEW09924.1| chemotaxis LafU protein [Vibrio mimicus VM573]
          Length = 315

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 75/331 (22%), Positives = 120/331 (36%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+        +  G+WKI  ADFM  LMA FLV+W++   + D +KAI  + N
Sbjct: 3   RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +     FD  N     S + IDL+ D  +        + S+  +         
Sbjct: 63  SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P          + ++
Sbjct: 112 --------------------------------------------GPESDSLIDGNFETQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK +   +  + A      V    T  G+ I + D     MF +  S   P    
Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       I I GHTD+ PFR       NW LS  RA  A + L+  G+  +R
Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAER 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L   + P +S NRRI++ V 
Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275


>gi|88704266|ref|ZP_01101980.1| motB family protein [Congregibacter litoralis KT71]
 gi|88701317|gb|EAQ98422.1| motB family protein [Congregibacter litoralis KT71]
          Length = 286

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 106/313 (33%), Gaps = 56/313 (17%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++      D    K I               K  F  QN  E  
Sbjct: 1   MATFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSM-----------KVAFGVQNEFELE 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              K    +    +       I  T Q+   Q  + ++                      
Sbjct: 50  DIPKGTSVVATEFSPGETSDTIVDTIQQVTDQTTDPSLRVGEG----------------- 92

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                                L     E++L  K    L +           L  +    
Sbjct: 93  --------------------ELEDSEAEELLQQKITALLAETEADADKLKDMLEDEVQTG 132

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V  E+    I + I +Q     F   S+    + + V+ +I E L      ISI GHTD
Sbjct: 133 KVDVESDGRTITVRIREQ---GSFPSGSATLNTDFVPVMARIREALTEIPGTISIEGHTD 189

Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           ++P R      NW LS  RA S    L++ G+ +D    + GFA  R    +D     ++
Sbjct: 190 STPLRGGRYESNWGLSSSRALSVTHELLREGLLKDDRMMVVGFADTRPFTFNDTVEGRAS 249

Query: 331 NRRIDILVEDRQG 343
           NRR++I++  RQG
Sbjct: 250 NRRVEIVI--RQG 260


>gi|90577360|ref|ZP_01233171.1| chemotaxis LafU protein [Vibrio angustum S14]
 gi|90440446|gb|EAS65626.1| chemotaxis LafU protein [Vibrio angustum S14]
          Length = 332

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 114/331 (34%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N + I+ K+         + G+WK+ +ADFM  LMA FLV+W++                
Sbjct: 3   NTEQIVFKRAAKRHSHQQHGGAWKVAFADFMIALMALFLVLWLMQ--------------- 47

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                     K I    N      +   +                               
Sbjct: 48  ---VVDQKERKAIVAYVNSASVFDEGAGNPF----------------------------- 75

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                    + +  + +    E       +  +      + N   P        + + ++
Sbjct: 76  --------DTANSLSPIDFGGEAADLSSHNAAMTIKSFFDGNGDGPESDALIPGSFETQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LA  +  T   + A      +  + T  G+ I + D     MF + S+   P    
Sbjct: 128 QLAILASVVEETAKQVSAQG---NISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           VL  I  +    +  + I GHTDA+PF+     R NW LS  RA  A Q L+  G+  +R
Sbjct: 185 VLLSIAPIFKQISNSLIISGHTDATPFKRQFSNRSNWELSSSRANVARQTLIAGGMPSNR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++  A   L     P  S NRRI++ + 
Sbjct: 245 VLQVAAMAERALLNKQSPNASENRRIELFIL 275


>gi|224825768|ref|ZP_03698872.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224601992|gb|EEG08171.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 325

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 118/327 (36%), Gaps = 59/327 (18%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +IKK     D   + G+WK+ +ADF+  LM  FLVMW++ + + +T   + +        
Sbjct: 13  VIKKVSRRQDDGGHSGAWKVAFADFVLALMCLFLVMWLLASREQETMAQLLR-------- 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                       +P    +Q++I+     H +    +L  G                   
Sbjct: 65  --------NGGGSPLAEGTQSRIEHQGTPHGSLIPRELVPG------------------- 97

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                   +     S  K                 +R     DL
Sbjct: 98  ---------------------QQATESRPNSQVKSSAQPSALDDGNGAKLRRRYDSAADL 136

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K         V   +   +    T  G+ + + D     MF++ S++       +LQK+
Sbjct: 137 QKLAKMMSDLSVEAGLAGNIQTVITPYGLRVMLHDTDKQGMFERGSAVINERFKHLLQKM 196

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           G++ AH    + + GHTD+  ++        NW LS +RA +A   L+  G++ + I ++
Sbjct: 197 GQMFAHIDNQLLLVGHTDSLQYKGQDYAAFSNWSLSSNRAMAARMQLLLGGMASNGILQV 256

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVE 339
            G A      A  P  + NRRI++LV 
Sbjct: 257 VGMADRAPLDARHPDAALNRRIELLVL 283


>gi|145298724|ref|YP_001141565.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851496|gb|ABO89817.1| Flagellar motor component MotB [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 292

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 113/327 (34%), Gaps = 53/327 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    + P N   W + YADFMT+L A F+V++          + + Q F          
Sbjct: 4   KKKKPEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 53

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  ++  +    +    S         ++ +  +T      + +       + +  
Sbjct: 54  ------IESLGKIGLISPPAGSPVMQGGTGILEPESRTTPSSPDKETVLEKDAPTAAADP 107

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 +  + S       K+                          K ++ +Q   + +
Sbjct: 108 FNETIGASEKPSATEAWPHKT--------------------------KEQEWVQVTKQTL 141

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L   +       +  E   + ++I I ++    +F   S+   P+ I ++ KI  +L
Sbjct: 142 NQQLKAQIESK---DLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVHKIAGIL 195

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317
           A+    + + GHTD S       R NW LS+ RA S    +L    +   R+    G A 
Sbjct: 196 ANIPGKVVVTGHTDNSQAPLELYRSNWELSVLRAASIVHIMLTDPKLDATRVIA-QGVAD 254

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            + +  +D      ANRR++I +   +
Sbjct: 255 AQPRYPNDTAEHRQANRRVEITLSQGK 281


>gi|34498443|ref|NP_902658.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
 gi|34104298|gb|AAQ60657.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
          Length = 328

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 125/341 (36%), Gaps = 63/341 (18%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
           G KN+      +IKK    +    + G+WK+ +ADF+  LM  FLV+W++ A D +  + 
Sbjct: 3   GLKNKGEHDGAVIKKVSRRNAEEGHGGAWKVAFADFVLALMCLFLVLWVLAARDQENLQQ 62

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +                      +P  + +  +ID   +   T    D   G    +   
Sbjct: 63  LLT----------------TSGGSPLLQGNGKQIDHMGNPPGTLIPRDPIPGQAGSQAAS 106

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +    +    ++ Q     ++  +                                    
Sbjct: 107 KSAVRDSDKRASEQPELPRRSYDSE----------------------------------- 131

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                    DL K  +          +   +    T  G+ +++ D     MF++ S+I 
Sbjct: 132 --------ADLRKLAAQLSEMSQKAGLSSNLQTVITPYGLRVTLHDTDQQGMFERGSAIV 183

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLM 300
            P    +LQ+IG +L      + + GHTDA+ +       A  NW LS +RA +A   +M
Sbjct: 184 EPRFRSLLQQIGSMLGEIDNRLLVVGHTDAAQYHRAGGFAAMSNWSLSSNRAMAARLHMM 243

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + G++ D + ++ G A         P+ + NRRI++LV   
Sbjct: 244 QGGLAADSVLQVVGMAERAPLDKQHPLGAVNRRIELLVLTS 284


>gi|332284002|ref|YP_004415913.1| chemotaxis protein [Pusillimonas sp. T7-7]
 gi|330427955|gb|AEC19289.1| chemotaxis protein [Pusillimonas sp. T7-7]
          Length = 310

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 113/335 (33%), Gaps = 71/335 (21%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
              +  I+ ++     +  +  SWKI YADF+T +MAFFLVMW++        + + +YF
Sbjct: 2   NKQEPRIVIRRKRSHVSVKHNDSWKIAYADFVTAMMAFFLVMWLVALVPQKDLQEMAEYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  +          +     + + I                               
Sbjct: 62  RMPLMTAVKGGPKNDTGSSVIPSGNPSII------------------------------- 90

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                      +    D     +  +   L  L  E    ++  
Sbjct: 91  ----------------------PNPSPIASRGDARTEGDLRDVERLENLKAELETLIETD 128

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             LQ    ++   L  +  D +   ++ +  R               F   S+       
Sbjct: 129 PILQQFRPQL---LLDMTPDGLRIQIIDKQNRPM-------------FATGSAQVQSYMR 172

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+++G         +SI GHTD+  + +      NW LS DRA +A + L+  G+ E 
Sbjct: 173 DILRQLGPTFNRLPNPLSISGHTDSIQYASGERDYSNWELSADRANAARRELVAGGMGES 232

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G +     I  +P  + NRRI I+V +++
Sbjct: 233 KVKRVLGLSSSVSLIKDNPAAAVNRRISIVVLNQR 267


>gi|258592514|emb|CBE68823.1| Outer membrane protein, OmpA/MotB family [NC10 bacterium 'Dutch
           sediment']
          Length = 308

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 79/342 (23%), Positives = 133/342 (38%), Gaps = 66/342 (19%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   +KN    + I+   K       ++ G+WK+ YADF+T +MA F+V+WI+      
Sbjct: 1   MSEETEKNDNRPRKIV---KKKGGHGGHHGGAWKVAYADFVTAMMALFIVLWIVGQ-SKS 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           TK+AI  YF          S G    +      S+   D  +       ++  +     Q
Sbjct: 57  TKEAIAGYFKDPSNFSKGGSPGGLQSKGSIGVLSKG-GDPVVVAQQASQTMSPEGSEDTQ 115

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K    + ++ I                                           L   ++
Sbjct: 116 KSPEDKEQDRI------------------------------------------HLEEAAE 133

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +    ++R   LQ L  +I   ++                  G+ + +I+      FD  
Sbjct: 134 QFRQVIQRVPTLQALQGQIRIEITSE----------------GLRVQLIEGNRDSFFDLG 177

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR---NIARDNWRLSLDRAYSAYQ 297
           SS   P T  +L  I   +A     + + GHTDA P+         NW LS DRA SA +
Sbjct: 178 SSRLKPVTRQLLAAIAHEVAKLPNQVVVEGHTDARPYSGNTGRDYSNWELSTDRANSARR 237

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            + + G+  +++S++ G+A   L   +DP+++ANRRI ILV 
Sbjct: 238 TMEEVGLRRNQVSRVIGYADQHLFNPTDPLDTANRRISILVR 279


>gi|260431755|ref|ZP_05785726.1| chemotaxis protein MotB [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415583|gb|EEX08842.1| chemotaxis protein MotB [Silicibacter lacuscaerulensis ITI-1157]
          Length = 279

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/334 (20%), Positives = 110/334 (32%), Gaps = 58/334 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   IIIKKK       ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K +  Y
Sbjct: 4   QTNAAPIIIKKKRTSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P                                         + +   +         
Sbjct: 64  FSPT----------------------------------------IPVNPVSGGGDGAFGG 83

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +N+F             +      K        D E         F    +     A + 
Sbjct: 84  DNMFSEKTMVMDGSGATNKNPTEAKRARGSTGVDAEGGGRGATEDFSTLEATLLGRAGES 143

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
               + L   ++      +   +           G        R   +F   SS      
Sbjct: 144 MVSKKALKHIVTRVTDKGLVVELFDTDDEPLFEPGTDNPTQLMRALVLFVARSSDL---- 199

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
                         T  I++ GH  +SP        W LS  RA    Q+L   GV   R
Sbjct: 200 -------------VTNAIAVEGHVKSSPLVVAHNPAWELSTSRAQVIRQLLQDKGVRPSR 246

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++G A  +L + + PM + N RI+I+     
Sbjct: 247 LNRVTGHADRKLAVEN-PMAARNDRIEIIFLRDP 279


>gi|317121531|ref|YP_004101534.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
 gi|315591511|gb|ADU50807.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
          Length = 343

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 107/313 (34%), Gaps = 59/313 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + YAD +T+L+AFF+VM+ ++  +                     +      +   +
Sbjct: 73  RWLLTYADLITLLLAFFVVMYAMSEVNATRY---------RALAASLRAAFATAGEALID 123

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
               +     + + + +++      ST          N     +   Q E          
Sbjct: 124 TKGISPDARKVLDGLNQDTGQPFPPST------APGTNPAPEENPGGQGEGPGRLPVVTG 177

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
             G                                  ++RL+DL  ++++ L       +
Sbjct: 178 PPG---------------------------------EEERLRDLVDQVNAALRDA---GL 201

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                 + T  G+ I   DQ     FD   +   PE   +L+++  +LA     I + GH
Sbjct: 202 GGRASAQLTDRGVAIIFEDQ---VFFDLGRADLRPEGRELLRRLAPILARVPGTILVEGH 258

Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM-- 327
           TD  P  +     NW LS  RA +  + L +  G+   R+   +G+   R +  +     
Sbjct: 259 TDNLPIHSDRFPSNWELSTARATTVVRFLAEQAGLDPRRL-AAAGYGEWRPRFPNTSEAN 317

Query: 328 NSANRRIDILVED 340
            + NRR++I+V  
Sbjct: 318 RARNRRVEIVVLR 330


>gi|90423604|ref|YP_531974.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90105618|gb|ABD87655.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 275

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 105/321 (32%), Gaps = 60/321 (18%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD M +L+AFF+++   +  D    K +               
Sbjct: 3   KKKREEAHGGHGWFVTFADLMALLLAFFVMLVAFSTQDTKKLKIVAGSMREAFGVQ---- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                        S ++    ++         +K  +           N      +    
Sbjct: 59  -------------SDSRYSGVLETDGIPTRGKVKNKAHVAIDDASNTPNPDEAGDSKAAG 105

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +                                  S     A++    L +L+K I 
Sbjct: 106 AQTQ--------------------------AEREFALASASLRQALQDLPELTELSKNIM 139

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                           FE T+ G+ + IIDQ    MF   S +P   T +++QK+   L 
Sbjct: 140 ----------------FEETKEGLNLEIIDQDGRSMFADGSKVPFERTRLLIQKLAAPLR 183

Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   +SI GHT A         N + LS DRA +  Q+L + G+    +  +SG A  +
Sbjct: 184 ATPLRVSIVGHTSAGLMPGRTDYNAFDLSSDRANAVRQILEREGLPTSHVFAVSGKADSQ 243

Query: 320 LKIASDPMNSANRRIDILVED 340
                DPM +ANRR+ I +  
Sbjct: 244 PLFPDDPMLAANRRVTITLMR 264


>gi|188592087|ref|YP_001796685.1| flagellar motor protein motb [Cupriavidus taiwanensis LMG 19424]
 gi|170938461|emb|CAP63448.1| Chemotaxis protein MotB; Flagellar motor rotation, linking torque
           machinery to cell wall [Cupriavidus taiwanensis LMG
           19424]
          Length = 321

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 126/335 (37%), Gaps = 67/335 (20%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            + + II+++       P+   SWKI YADFMT +MA FLV+W++++ +  T + I +YF
Sbjct: 5   HDMRPIIVRR-AKSHARPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  +   +      +       + +    +                          
Sbjct: 64  RMPLKVAIVGGEKSSQSPSVIPGGGMDVMRKDGE-------------------------- 97

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                                          +D ++   ++E   L  L +     ++  
Sbjct: 98  ----------------------IMRAHDNDPSDEQRRNEQQEAQRLRALKQRLEQIIENN 135

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L+    ++   L  + ++ +   +L                N PMF   S+       
Sbjct: 136 PVLRQFRPQL---LLDITSEGLRIQILDTQ-------------NRPMFRTGSATVESYMR 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L++IG VL      +S+ GHTDA+ + N      NW LS DRA ++ + L+  G+ E 
Sbjct: 180 TILREIGPVLNELPNKVSLSGHTDAANYSNGERTYSNWELSGDRANASRRELIAGGMQEG 239

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A        D +   NRRI I+V +++
Sbjct: 240 KVLRVLGLAATMPLDKQDLLAPVNRRISIVVLNQK 274


>gi|311992350|gb|ADQ26748.1| flagellar stator protein [Aeromonas hydrophila]
          Length = 291

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 115/327 (35%), Gaps = 53/327 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    + P N   W + YADFMT+L A F+V++          + + Q F          
Sbjct: 3   KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  ++  +    +    S         ++ +  +T    + + +      ++ S  
Sbjct: 53  ------IESLGKIGLISPAAGSPVMQGGTGILEPESKTTPSSPKKETVLEKDAPMAASDP 106

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 +  + S       K+                          K ++ +Q   KK+
Sbjct: 107 FNETIGASEKPSATESWPHKT--------------------------KEQEWVQVTKKKL 140

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              L   +     K +  E   + ++I I ++    +F   S+   P+ I ++ KI  +L
Sbjct: 141 EQQLKAQIE---SKDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKISGIL 194

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317
           A     + + GHTD S       R NW LS+ R+ S    +L    +   R+    G A 
Sbjct: 195 ADIPGKVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIA-QGVAD 253

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            + +  +D      ANRR++I +   +
Sbjct: 254 AQPRYPNDTAEHRQANRRVEITLSQGK 280


>gi|39935079|ref|NP_947355.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
           CGA009]
 gi|192290612|ref|YP_001991217.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|39648930|emb|CAE27451.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
           CGA009]
 gi|192284361|gb|ACF00742.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 274

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 120/326 (36%), Gaps = 64/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK A +    +   W + +AD M +LM+FF+++   +  D      +          
Sbjct: 1   MAKKKKAEEHAGGHG--WFVTFADLMGLLMSFFVMLVAFSTQDKAKLMIVAGSMR----- 53

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                                  +    ++  + S  ++      + + +  E+    LS
Sbjct: 54  -----------------------EAFGVQNDARYSGIIENDGLPTRGKVKNTEHVNPELS 90

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            ++ S                          IN +E+      S     A++    + +L
Sbjct: 91  TAKPSPGEVTRDEG-----------------INTKEDREFALASASLRQALQNMPEISEL 133

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF   S +P   T ++LQ++
Sbjct: 134 SKNIM----------------FEETKQGLNLEIMDQDGRSMFADGSKVPFERTRLLLQRL 177

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   ++I GHT +      +  N W LS DRA S  Q+L + G+    I  ++G
Sbjct: 178 AVPLRATPLRVTIVGHTSSGLMPERSDYNGWDLSSDRANSVRQILEREGLPGSHIFAVTG 237

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            A  +     DP  +ANRR+ I +  
Sbjct: 238 KADSQPLFPDDPSIAANRRVTITLMR 263


>gi|327478801|gb|AEA82111.1| OmpA/MotB domain-containing protein [Pseudomonas stutzeri DSM 4166]
          Length = 311

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 117/342 (34%), Gaps = 66/342 (19%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M S  DK +  ++ +I++++        + G+WK+ +ADF   +MA F+V+WII    + 
Sbjct: 1   MKSR-DKGKAGEREVIVRRRTKKGHGDEHGGAWKVAFADFTLAMMALFMVLWIIQPQMNL 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           T  A  +  +    +      GIFD  +               +   +   +   G    
Sbjct: 60  TNPAFGEQESNPLVD---GGAGIFDGTSTSPLELDGVPLRPAPDEPQRPREETARGEGET 116

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R                                                    + 
Sbjct: 117 PADGTRRY------------------------------------------------ASTA 128

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           E        + +      +++    +V   +   +              D +   MF + 
Sbjct: 129 ELQALAALMQEVAGQVDALANLEVDVVPQGLRILIK-------------DDQQRFMFQRG 175

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVL 299
           S++  P    +L  +  VL+     + I GHTDA+P+R     DNW LS DRA  A  VL
Sbjct: 176 SAVLNPHFAKLLAVLAGVLSKVENKLIISGHTDATPYRLQSGYDNWNLSGDRALRARNVL 235

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + +G+    + +++  A         P + ANRR++IL+   
Sbjct: 236 VDAGLPGRSVLQVTAQADVMPLRPEAPEDGANRRVEILLLTD 277


>gi|146341585|ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
 gi|146194391|emb|CAL78416.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
          Length = 276

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 105/326 (32%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK        +   W + +AD M ++M+FF+++   +  D++  K +          
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMREAFGV 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +      E +      + K    I    T      +                     
Sbjct: 59  QSESRYSGIVESDGLPTRPKLKNAAHISPEETSREPSPE--------------------- 97

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                  +          + +      S     A++    + ++
Sbjct: 98  ----------------------QEERQHTNGAKLKTDRQFALASASLRQALQDMPEMTEI 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF   S  P   T  +++K+
Sbjct: 136 SKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKTPYDRTRRLIEKL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   + I GHT A           + LS DRA +  Q+L + G+    I  +SG
Sbjct: 180 AAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            A  +     DP  +ANRR+ I +  
Sbjct: 240 KADTQPLFPDDPSLAANRRVTITLMR 265


>gi|27378912|ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
 gi|27352062|dbj|BAC49066.1| pomB [Bradyrhizobium japonicum USDA 110]
          Length = 276

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/327 (19%), Positives = 110/327 (33%), Gaps = 64/327 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF-GK 74
           + KKK        +   W + +AD M ++M+FF+++   +  D +  K +        G 
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTQDANKLKIVAGSMRDAFGV 58

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                  GI +    P R     +D    E  +      +                    
Sbjct: 59  QSEARYAGIVESDGLPTRPRLKNVDHIQPEDASNTPTPDQ-------------------- 98

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                                   +  D       + +      +     A++    L +
Sbjct: 99  ------------------------EDRDRTSGAKIKVDRNFALAAASLRQALQDMPELTE 134

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           ++K I                 FE T+ G+ + I+DQ    MF   S +P   T  +++K
Sbjct: 135 MSKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLVEK 178

Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +   L  +   +SI GHT A           + LS DRA +  Q+L + G+    I  +S
Sbjct: 179 LAIPLKATPLRVSIAGHTAAGFVPTRSDYGAFDLSADRANAVRQILEREGLPASHIFAVS 238

Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340
           G A  +     DP  +ANRR+ I +  
Sbjct: 239 GKADTQPLFPDDPSLAANRRVTITLMR 265


>gi|303248999|ref|ZP_07335244.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489585|gb|EFL49525.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 317

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 110/315 (34%), Gaps = 35/315 (11%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I  AD MT+L+ FFL++  ++  D +  + +             A K    E  P  +
Sbjct: 26  WPISLADMMTLLLCFFLLIVAVSHVDLNRYERVADSMQKAMVTEKPAPKPKKAEPKPVVK 85

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
            +                      +T   +    L         +           + +E
Sbjct: 86  KTTPPKPQPKPVEQPAMVRSKVSHTTLTSEPVAPLAQEKPKPEPTPAKPAAPTEQPKPAE 145

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             K   K+                  + E       +K L+D+ K++++ L    +    
Sbjct: 146 SVKAETKAP-----------------APESERTGPTRKSLEDIRKELTAKLGLDTSA--- 185

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             V       G+ +++   R    FD +S+   P  + +L+ I   L+ +   +++ GHT
Sbjct: 186 --VEIVPRENGVELNL---RGAAFFDLASAEIKPAALPLLRDIAATLSGTPYKVTVEGHT 240

Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--- 328
           D  P  +     NW LS  RA    + L+  GV  + + ++ G A  +    +D      
Sbjct: 241 DNLPIESWLYPSNWELSSARASRVARFLIDGGVPRNHL-RVEGLADTQPVAPNDDEAGRP 299

Query: 329 -----SANRRIDILV 338
                + NRR+ ILV
Sbjct: 300 IPENQAKNRRVVILV 314


>gi|117619885|ref|YP_856319.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561292|gb|ABK38240.1| chemotaxis protein MotB [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 291

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 115/327 (35%), Gaps = 53/327 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    + P N   W + YADFMT+L A F+V++          + + Q F          
Sbjct: 3   KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  ++  +    +    S         ++ +  +T    + + +      ++ S  
Sbjct: 53  ------IESLGKIGLISPAAGSPVMQGGTGILEPESKTTPSSPKKETVLEKDAPMAASDP 106

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 +  + S       K+                          K ++ +Q   KK+
Sbjct: 107 FNETIGASEKPSATESWPHKT--------------------------KEQEWVQVTKKKL 140

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              L   +     K +  E   + ++I I ++    +F   S+   P+ I ++ KI  +L
Sbjct: 141 EQQLKAQIE---SKDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKISGIL 194

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317
           A     + + GHTD S       R NW LS+ R+ S    +L    +   R+    G A 
Sbjct: 195 ADIPGKVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIA-QGVAD 253

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            + +  +D      ANRR++I +   +
Sbjct: 254 AQPRYPNDTPEHRQANRRVEITLSQGK 280


>gi|90415361|ref|ZP_01223295.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
 gi|90332684|gb|EAS47854.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
          Length = 399

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 114/375 (30%), Gaps = 59/375 (15%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----- 77
                +   SW   +AD  T+LMAFF+++      +    K +                 
Sbjct: 28  CPPCKSGAPSWMATFADMATLLMAFFVLLLSFAEVNVPKFKQVAGSIASAFGVARIVPKI 87

Query: 78  --TASKGIFDEQNPPERSSQNKIDLSID--EHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
              A+  +  ++  P R+    ID      E IT+  V  K  + +   + Q    ++  
Sbjct: 88  SIPAATSLVTQEYTPSRAEATVIDQKRQRSEDITQEFVVKKTETEDADFKTQEEFRSVTE 147

Query: 134 LSNSQQSEHCKNSLTRD------------------------------------------- 150
               Q  +        D                                           
Sbjct: 148 ALAEQIEQGQVQVTIEDNKVVVELRAESASGGQDYDNEASGGGGPISQTTIEVASKVVEL 207

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
             K     +    + +  ++           +       +R QD+  K       L AD 
Sbjct: 208 QSKISTEIQVRKQQLASGEQSGGLESDSDSNQSSGGSADQRRQDIDDKYQQIRLSLAADI 267

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
                  E     I++ +  Q     F   SS   P    +L ++G  L+ ++  + + G
Sbjct: 268 NNGLAEVERDGDKIIVRLASQ---GSFVSGSSNLQPGFTGLLTRVGNSLSVTSGKVRVEG 324

Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           HTD  P         NW LS  R+ S       +   +     ++GFA  R   +++   
Sbjct: 325 HTDNIPVAFSERFNSNWDLSAARSASVADFFADNSELDQSAITVAGFADTRPIDSNNTAA 384

Query: 328 -NSANRRIDILVEDR 341
             + NRRI+++V+  
Sbjct: 385 GRARNRRIEVIVDGS 399


>gi|92117049|ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14]
 gi|91799943|gb|ABE62318.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 276

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 112/326 (34%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK        +   W + +AD M ++M+FF+++   +  D++  K +          
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDA--- 55

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                   F  Q     S   + D        KNS  +    T+        E      +
Sbjct: 56  --------FGVQTEVRYSGIIESDGLPTRPKLKNSAHVPPEETSATPTPNEQERFKTAGA 107

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             +       +                                S     A++    L +L
Sbjct: 108 RLKTDREFALA--------------------------------SASLRQALQDMPELTEL 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF   S  P   T ++++K+
Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFADGSREPYERTRMLIRKL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   ISI GHT ++        D + LS DRA +  Q+L + G+    I  ++G
Sbjct: 180 AAPLKATPLRISITGHTASNFIPTRSDYDGFDLSADRANAVRQILEREGLPPSHIFAVAG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            +        DP  +ANRR+ I +  
Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265


>gi|316934820|ref|YP_004109802.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602534|gb|ADU45069.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 273

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 116/321 (36%), Gaps = 62/321 (19%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD M +L+AFF+++   +  D    K +               
Sbjct: 3   KKKREEAHGGHGWFVTFADLMALLLAFFVMLVAFSTQDTQKLKIVAG------------- 49

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                          +  +    +   + S  ++      + + +  E+    LS ++ S
Sbjct: 50  ---------------SMREAFGVQSDARYSGIIENDGLPTRGKVKNTEHVNPELSTAKPS 94

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                     IN +E+      S     A++    + +L+K I 
Sbjct: 95  PGEVTRDEG-----------------INTKEDREFALASASLRQALQNMPEIAELSKNIM 137

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                           FE T+ G+ + I+DQ    MF   S +P   T ++LQ++   L 
Sbjct: 138 ----------------FEETKQGLNLEIMDQDGRSMFADGSRVPFERTRLLLQRLAVPLR 181

Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   ISI GHT +      +  N W LS DRA S  Q+L + G+    I  ++G +  +
Sbjct: 182 ATPLRISIVGHTSSGLLPERSDYNGWDLSSDRANSVRQILEREGLPGSHIFAVTGKSDSQ 241

Query: 320 LKIASDPMNSANRRIDILVED 340
                DP  +ANRR+ I +  
Sbjct: 242 PLFPEDPSIAANRRVTITLMR 262


>gi|114320660|ref|YP_742343.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227054|gb|ABI56853.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 285

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 107/318 (33%), Gaps = 71/318 (22%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ GSWK+ +ADFMT + A FLV+WI+ A DD  + A+  YF                
Sbjct: 22  GGHHGGSWKVAFADFMTAMFAMFLVLWIVTAMDDPQRAAVADYFRNPTLVD--------- 72

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
                +  +++   +   E  +   ++L    T   +Q                SE  + 
Sbjct: 73  -----DSGAESAPSMLDLEGGSPTPLELGETPTPMDQQRDEGAWISEGAMRDLLSELERA 127

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
              ++                                                    L  
Sbjct: 128 LEEKEELAEFR-------------------------------------------DQVLMD 144

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +  D +   ++    R               FD  S+        +L  +  VL      
Sbjct: 145 MTPDGLRIQLVDAENRPM-------------FDLGSARLRSYAAEILSGLTGVLERVPNA 191

Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GHTDA PF       NW LS DRA +A + L  SG++  R++++ G A  +     
Sbjct: 192 LRISGHTDARPFVGRRDYTNWELSTDRANAARRTLTASGIAPYRVAQVVGVAETQPLDPD 251

Query: 325 DPMNSANRRIDILVEDRQ 342
           +PM   NRRI I++   +
Sbjct: 252 NPMAPVNRRISIILLTPE 269


>gi|304413521|ref|ZP_07394994.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
 gi|304284364|gb|EFL92757.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
          Length = 326

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 120/332 (36%), Gaps = 58/332 (17%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +    IIK+         + G+WK+ +ADF   +MA F+V+WI+ A  ++ +  I  + +
Sbjct: 7   STHTTIIKRSAKKHHAGVHTGAWKVAFADFTLAMMALFMVLWIVGAVSEEERHEIMSHIH 66

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                                       +         +         ++  +       
Sbjct: 67  ---------------------------GNTIFSNQSFLSIPLKNKNGADKNFEMLHTNKT 99

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +    +    K       +  K++                             K   
Sbjct: 100 RDSMKERARENRLKEPFKEPDQIRKEVVD---------------------------KSAT 132

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +QDL++ +          N    +  E    G+ I I D +   MF  SS++  P    
Sbjct: 133 EMQDLSRMVLEISKAH---NAQSNLNIEMVPQGLRILIQDDKKREMFPLSSALLTPFFTR 189

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L ++  VL      + I GHTD + +R+    +NW LS +RA +A + L + G+ +  I
Sbjct: 190 LLAELAPVLNDLNNKVIITGHTDGARYRDQELYNNWNLSGERAMAARRALERGGLDDAHI 249

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +I+  A   L    DP+ +ANRRI+I+V  +
Sbjct: 250 LQINAMADQMLLDEKDPLGAANRRIEIMVLTK 281


>gi|146278768|ref|YP_001168927.1| flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557009|gb|ABP71622.1| Flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 278

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 60/335 (17%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             Q N   ++IK+K  +    ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K + 
Sbjct: 2   AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +  G            +            + + + K            
Sbjct: 62  DYFNPTIPMNRVSGGGDGAFGGDSVFHDRTMTQTGTGAVDERATPENKARGERG------ 115

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                E     EE   L  + K      
Sbjct: 116 -------------------------------------ETGEAAEEQARLEEVEKLLKART 138

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                ++ L + I                +   T  G++I I D  + P+F   +  P P
Sbjct: 139 GESMTMERLLRHI----------------VTRITDEGLVIEIFDLPDVPLFLGDTDQPEP 182

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
               + + + EVL  +T  I++ GH  + P   I    W LS  RA    +++  +G+  
Sbjct: 183 ILPQIARLLAEVLPITTNRIAVSGHVRSYPITLIRNPAWDLSALRAQRMRELIESAGLPG 242

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +R  +ISGFA  +     DPM   N R+++++  +
Sbjct: 243 ERTQRISGFADRKPATP-DPMAVRNNRLEVILLRK 276


>gi|149201621|ref|ZP_01878595.1| flagellar MotB protein [Roseovarius sp. TM1035]
 gi|149144669|gb|EDM32698.1| flagellar MotB protein [Roseovarius sp. TM1035]
          Length = 383

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 108/367 (29%), Gaps = 60/367 (16%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-------NPFGKNLMT 78
            P    +W   +AD  T+LMAFF+++      +    K +                    
Sbjct: 23  PPKGAPAWMATFADIATLLMAFFVLILSFAEFNQPKFKMVAGSLSMAFGVQRQVPVMEQP 82

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               I D    P         ++ D   T+     +  +    K     E       +  
Sbjct: 83  KGTTILDLSFSPSPEMSVTEQMTQDTTETEQPEIQRPVTEEDGKGAAEGEGADAPGQSEA 142

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL-------------------- 178
           +           S + K   +  ++  + +  +   LP                      
Sbjct: 143 REMAEALQEALQSGQVKVESREGEVVMTFDAPDAQSLPGQLTEAAEALQQAAEATGQSTS 202

Query: 179 ---------------------SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
                                ++ +  A +  +       ++   L   + + +   V  
Sbjct: 203 DVMMQGLADNIQEMAEVMQGKAEAETQAGQSARSAAIADAQLQVALQQEIGEGL---VSV 259

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
           E     ++I++ +      F    +    E   V+ ++          I + GHTD+ P 
Sbjct: 260 EQREDKVVITVGE---GGAFPSGGADLTDEARDVMARLAFAAMGEASEIVVTGHTDSVPL 316

Query: 278 RN--IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANR 332
                 RDNW L+  RA S  + L  SG +  +R++  S          +D     + NR
Sbjct: 317 GGASPYRDNWGLAAARASSVVRELSGSGLIEPERLTATS-RGESLPVAENDTAAGRAQNR 375

Query: 333 RIDILVE 339
           RI+I + 
Sbjct: 376 RIEIEIT 382


>gi|27381973|ref|NP_773502.1| flagellar motor protein MotB [Bradyrhizobium japonicum USDA 110]
 gi|27355143|dbj|BAC52127.1| motB [Bradyrhizobium japonicum USDA 110]
          Length = 445

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/297 (23%), Positives = 117/297 (39%), Gaps = 8/297 (2%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
            + + ++D  K  + Y +PF       +     + +    S         D        +
Sbjct: 149 ALTSAEEDGLKGGDAYRDPFDPGYWKLAPQASKDSDRIIESEPKPNAPVRDNATGTGQGE 208

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE- 171
            +   +        +  N    S S             S        S         +  
Sbjct: 209 PQARRSKTDDAGGSVAPNADASSASLSPLLPPGPAPAPSPSQSSREGSAQANAQSGAQAS 268

Query: 172 ------NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                     P  S+ +  A  ++  ++ L   I+  LS  +               G+L
Sbjct: 269 AAAQGRPGDTPKDSEPRDAAQTQQPTVKQLQSAIAEALSD-IKAGAGPAAEVRQVEEGLL 327

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +S+ D  +  MF   S+ P PE I V+ KIG +L     +I +RGHTD  P+++   DNW
Sbjct: 328 VSLTDDTSFGMFAVGSAEPRPELIRVIDKIGPLLMKRQGMIIVRGHTDNRPYKSETYDNW 387

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RLS  RA  AY +L++SGV   RI  + G+A  R K+ +DP  + NRRI+IL+ +++
Sbjct: 388 RLSTARAQMAYYMLVRSGVDAQRIEHVEGYADRRPKLQNDPAAAQNRRIEILIREKR 444



 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
            +   + +I++++ A  +  ++ G WKI YADFMT +MAFFLVMW++NA + D K+ +  
Sbjct: 2   EEVKQELVIVRRRSAFAEEAHHGGVWKIAYADFMTAMMAFFLVMWLLNALNQDQKQVVAS 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YFNP        +     + +  E ++    D                 +  +   Y+  
Sbjct: 62  YFNPIKLAENAPAPKGLKDLSKKEPTTFEGQDGRRQPAGPSEERRGDSPTAEKPPFYEEK 121

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                  +   +  +  N  +     G       D  K  +   + F P   K    A K
Sbjct: 122 VLFRDPYATLAEIANSANQASGQRRAGALTSAEEDGLKGGDAYRDPFDPGYWKLAPQASK 181

Query: 188 RKKRLQDLAKKISSTLSG 205
              R+ +   K ++ +  
Sbjct: 182 DSDRIIESEPKPNAPVRD 199


>gi|148254925|ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
 gi|146407098|gb|ABQ35604.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
          Length = 276

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 105/326 (32%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK        +   W + +AD M +L++FF+++   +  D++  K +          
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLLVSFFVMLVAFSTMDNNKLKVVAGSMRDAFGV 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +      E +      + K    +    T                            
Sbjct: 59  QSESRYSGIVESDGLPTRPKLKNAAHVSPEETSREPSP---------------------- 96

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                  +          + +      S     A++    + ++
Sbjct: 97  ---------------------EQEERQHTNGAKLKTDRQFALASASLRQALQDMPEMTEI 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF   S +P   T  +++K+
Sbjct: 136 SKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLIEKL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   + I GHT A           + LS DRA +  Q+L + G+    I  +SG
Sbjct: 180 AAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            A  +     DP  +ANRR+ I +  
Sbjct: 240 KADTQPLFPDDPSLAANRRVTITLMR 265


>gi|260429438|ref|ZP_05783415.1| OmpA/MotB [Citreicella sp. SE45]
 gi|260420061|gb|EEX13314.1| OmpA/MotB [Citreicella sp. SE45]
          Length = 291

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 116/343 (33%), Gaps = 55/343 (16%)

Query: 1   MNSH--GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATD 58
           MN+         N   +IIK+K       ++ G+WK+ YADF+T +MAFFL+MW++NAT 
Sbjct: 1   MNNEVVEMAVDSNVAPVIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFLLMWLLNATT 60

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
           +  +K +  YF+P       +  G          +      +             +   +
Sbjct: 61  EKQRKGLADYFSPTIAVSRMSGGGDGTLGGESVFTEAVLPRVGTGATSLNPMAQNRARGS 120

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           +   Q +         ++ +  +  ++ L     +            +   +E   +   
Sbjct: 121 SDPGQARETGKAEEPGASDEDLKALEDLLMGRGGETMIDDNLMRHIVTRVTDEGLVVELF 180

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             E                                              + D+   PM  
Sbjct: 181 ETEDA-------------------------------------------RLFDETGAPM-- 195

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                  P    +   I  V    T  +++ GHT A P       +W +S  RA    Q+
Sbjct: 196 -------PLLRDLAGVIARVSRLVTNPLAVEGHTTAFPIVLARDPSWDVSTRRADDFRQL 248

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           L+  G+   RI +++  A      ++ PM++ N R++++   +
Sbjct: 249 LLAGGLDRKRIDRVTAHADREPSQSN-PMDARNNRLEVIFLRK 290


>gi|187926231|ref|YP_001892576.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
 gi|241665719|ref|YP_002984078.1| flagellar motor protein MotB [Ralstonia pickettii 12D]
 gi|187727985|gb|ACD29149.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
 gi|240867746|gb|ACS65406.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
          Length = 315

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 126/335 (37%), Gaps = 66/335 (19%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +    G  D+ +  + S   K ++         +V  +    ++        
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPALKQNMPQPNPSPSPTVQRQRNIRDESD------ 116

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                      +  L  L ++    ++ 
Sbjct: 117 -------------------------------------------DAALNKLKQKIAEMVET 133

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     ++   L  +  + +   ++ +  R               F  +S+   P  
Sbjct: 134 NPVMSQFKHQL---LIDMTTEGLRIQIVDQQNRPM-------------FANASAEVQPYM 177

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L+++G  L      IS+ GHTDA+ +       NW LS DRA ++ + L+  G+  +
Sbjct: 178 RTILRELGTALNDVPNPISLSGHTDATQYATQHGYSNWELSADRANASRRELVAGGMKPE 237

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++S++ G         ++  N  NRRI I+V + +
Sbjct: 238 KVSRVVGLEASVPLDKTNIYNPINRRISIVVLNAR 272


>gi|209885628|ref|YP_002289485.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
 gi|209873824|gb|ACI93620.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
          Length = 275

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 105/321 (32%), Gaps = 59/321 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    D       W + +AD M ++M+FF+++   +  D    K +              
Sbjct: 3   RKKRGDAHAGGHGWFVTFADLMGLMMSFFVMLVAFSNQDQTKLKIVAGSMREA------- 55

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
               F  QN    S   + D        KN   +     +                    
Sbjct: 56  ----FGVQNDARYSGVIETDGLPTRPKLKNVDHIPPEEASNTPSPDE------------- 98

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                              K          + +      S     A++    + +L+K I
Sbjct: 99  -------------------KEMAKLYGARIKTDREFALASASLRQALQDMPEMTELSKHI 139

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                            FE T+ G+ + I+DQ    MF + S  P   T ++++K+   L
Sbjct: 140 M----------------FEETKNGLNLEIVDQDGRSMFAEGSREPYERTRMLIRKLAAPL 183

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             S   I+I GHT A+       D + LS DRA +  Q+L   G+    I  +SG A   
Sbjct: 184 RQSPLRIAIVGHTSANVPLRPGYDAFDLSADRANAVRQILQNEGLPATHIFSVSGKADTE 243

Query: 320 LKIASDPMNSANRRIDILVED 340
                DP  SANRR+ I +  
Sbjct: 244 PLFPDDPTLSANRRVTITLMR 264


>gi|255744684|ref|ZP_05418635.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
 gi|262161183|ref|ZP_06030294.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
 gi|262168686|ref|ZP_06036381.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
 gi|255737715|gb|EET93109.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
 gi|262022804|gb|EEY41510.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
 gi|262028933|gb|EEY47586.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
          Length = 294

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 31/304 (10%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           M++LM FF+++   +  D    K I               K  F  QN  E     K   
Sbjct: 1   MSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVKDIPKGTS 49

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
            I +       +        ++     +  + +              +     G      
Sbjct: 50  IIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGG------ 103

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
              + +    ++        ++  A    ++++ +A+ I   LS  +       +  E  
Sbjct: 104 ---QSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGA---IEVENL 157

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              I I I ++     F + S+   P+   ++++I E++      + + GHTD     + 
Sbjct: 158 GQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSE 214

Query: 281 -ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             R NW LS  RA S  Q + K       R+ ++ G A  +    +D       NRR++I
Sbjct: 215 LYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADTQPLGPNDTEAQRATNRRVEI 273

Query: 337 LVED 340
            +  
Sbjct: 274 SILQ 277


>gi|75675430|ref|YP_317851.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74420300|gb|ABA04499.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 276

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 110/326 (33%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK        +   W + +AD M ++M+FF+++   +  D+   K +         +
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNQKLKIVAGSMRDAFGS 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                     E +      + K    +    T  +         +    +   +  F L+
Sbjct: 59  QTEVRYSGIIESDGLPTRPKLKNAAHVPPDETSTTPTPNEQERFKIAGARLKTDREFALA 118

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                                      S     A++    L +L
Sbjct: 119 -------------------------------------------SASLRQALQDMPELTEL 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF + S  P   T ++++++
Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIRRL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   IS+ GHT ++        D + LS DRA    Q+L + GV    I  +SG
Sbjct: 180 AAPLKATPFRISVTGHTASNFIAMRSDYDGFDLSADRANVVRQILEREGVPAGHIFAVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            +        DP  +ANRR+ I +  
Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265


>gi|85715414|ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85697835|gb|EAQ35710.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 276

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 108/326 (33%), Gaps = 62/326 (19%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK        +   W + +AD M ++M+FF+++   +  D+   K +         +
Sbjct: 1   MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNQKLKIVAGSMRDAFGS 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                     E +      + K    +    T  +         +    +   +  F L 
Sbjct: 59  QTEVRYSGIIESDGLPTRPKLKNAAHVPPDETSTTPTPDEQERFKTAGARLKTDREFAL- 117

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                                      S     A++    L +L
Sbjct: 118 ------------------------------------------ASASLRQALQDMPELTEL 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K I                 FE T+ G+ + I+DQ    MF + S  P   T +++ K+
Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIGKL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   ISI GHT ++        D + LS DRA    Q+L + G+    I  +SG
Sbjct: 180 AAPLTATPFRISITGHTASNFVPMRSDYDGFDLSADRANVVRQILEQEGLPPSHIFAVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340
            +        DP  +ANRR+ I +  
Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265


>gi|77463800|ref|YP_353304.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
 gi|77388218|gb|ABA79403.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
          Length = 366

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 108/340 (31%), Gaps = 31/340 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81
            P    +W   +AD  T LMAFF+++      D+ +   +                T+  
Sbjct: 27  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124
            + D   P       + D   D   +++  D                 L++ S   +   
Sbjct: 87  TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +    +    + S      + +      + +   +     K+                  
Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTAQPRPEPKAGPAGPGEGTGAPPGPPAG 206

Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                   Q +  ++ +    + L  +     V  E T   + +S+        F   S 
Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
              P+   V+ +I E   +    I++ GHTD  P    A  DN  L+  RA S  + L+ 
Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           SG V   RI+ +S          +      + NRRI+I +
Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362


>gi|126462636|ref|YP_001043750.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104300|gb|ABN76978.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 366

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81
            P    +W   +AD  T LMAFF+++      D+ +   +                T+  
Sbjct: 27  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124
            + D   P       + D   D   +++  D                 L++ S   +   
Sbjct: 87  TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +    +    + S      + +      + +   +     K+                + 
Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTAQPRPEPKAGPAGPGEGTGAPPGPPVG 206

Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                   Q +  ++ +    + L  +     V  E T   + +S+        F   S 
Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
              P+   V+ +I E   +    I++ GHTD  P    A  DN  L+  RA S  + L+ 
Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           SG V   RI+ +S          +      + NRRI+I +
Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362


>gi|311105916|ref|YP_003978769.1| motility protein B 1 [Achromobacter xylosoxidans A8]
 gi|310760605|gb|ADP16054.1| motility protein B 1 [Achromobacter xylosoxidans A8]
          Length = 330

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 65/332 (19%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           N+  ++I++K       ++ GSWKI YADF+T +MAFFLVMW+I+    +  K I +YF 
Sbjct: 5   NNHRVVIRRKKGGHGGGHHGGSWKIAYADFITAMMAFFLVMWLISIVPREELKGIAEYFR 64

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              +  +        E +       + +    D    + +                    
Sbjct: 65  MPLRVAIAGGPSSSAETSAVPGGGSDPLRSEGDVRRAQGN-------------------- 104

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                 + E + L  L K     ++   
Sbjct: 105 ---------------------------RVEAQPMGDAERREQHRLENLKKRLENVIETSP 137

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L+    ++   L  L  + +   ++    R               F    +   P    
Sbjct: 138 VLKSFRPQL---LIDLTTEGLRIQIIDNQNRPM-------------FATGRADVQPYMRD 181

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L+++G VL      +SI GHTDAS +     A  NW LS DRA ++ Q L+  G++E +
Sbjct: 182 ILRELGPVLNELPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESK 241

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + +I G +     +  DP  + NRRI ++V +
Sbjct: 242 VLRIQGLSSSMSLVKDDPYAAVNRRISLVVLN 273


>gi|332669204|ref|YP_004452212.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
 gi|332338242|gb|AEE44825.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
          Length = 301

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 106/320 (33%), Gaps = 52/320 (16%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           ++   N   W + Y+D +TVLMA F+V++ I+  D +   A+         +  T+   +
Sbjct: 15  EEEHVNHERWLVSYSDMITVLMALFIVLFAISQVDQEKYIALRDSLAAGFMDTTTSPSVL 74

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
                  +  S    +   D      S D  +G                 +  +  +   
Sbjct: 75  DGTDGTLDGKSTQSENTPADGTAGMVSADDGLGQQAAVPPVPATPTTDASVDPATLAAAQ 134

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +                                             L +L  +I+  L
Sbjct: 135 AEAA-------------------------------------------HLTELRDRIAQAL 151

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    + + + V       G+++ ++       F  + +        VL     ++    
Sbjct: 152 AA---NGLDQAVRMRIDERGLVLGLVADD--VFFAPARAELTDTARRVLDVASPLIVGIG 206

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
           E +S+ GH +  P       NW LS DRA    + L++  G+   RI  + GF   R  +
Sbjct: 207 ENVSVEGHANVIPVSGRYPTNWELSADRATQVLRHLVEVDGMPGPRIMAV-GFGDTRPLV 265

Query: 323 ASDPMN--SANRRIDILVED 340
           A D     +ANRR+D+++  
Sbjct: 266 AGDSPEALAANRRVDLVILS 285


>gi|260364262|ref|ZP_05776961.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030]
 gi|308113750|gb|EFO51290.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030]
          Length = 278

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 29/300 (9%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                             K T  +      ++        ++  + +  + ++ L + I 
Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQSNQSAESDMQQQQSEEMSQEMETLMESIK 165

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   +       +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ I GHTD     +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278


>gi|221639652|ref|YP_002525914.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221160433|gb|ACM01413.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
          Length = 366

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81
            P    +W   +AD  T LMAFF+++      D+ +   +                T+  
Sbjct: 27  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124
            + D   P       + D   D   +++  D                 L++ S   +   
Sbjct: 87  TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +    +    + S      + +      + +   +     K+                + 
Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTSQPRPEPKAGPAGPGEGTGAPPGPPVG 206

Query: 185 AMKRKKRLQDLAKKISST--LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                   Q +  ++ +    + L  +     V  E T   + +S+        F   S 
Sbjct: 207 GDTGAALRQSVRAELDAIRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
              P+   V+ +I E   +    I++ GHTD  P    A  DN  L+  RA S  + L+ 
Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           SG V   RI+ +S          +      + NRRI+I +
Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362


>gi|304405743|ref|ZP_07387401.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304344986|gb|EFM10822.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 278

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 123/328 (37%), Gaps = 69/328 (21%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +++   +   +   SW I YAD MT+L+A F+V++ +++ D      + + FN       
Sbjct: 3   RRRKHEEHEEHADESWLIPYADLMTLLLALFIVLFSMSSVDAKRFDEMSRAFNMALD--- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
               G+ D     +                                          L++ 
Sbjct: 60  -GGVGVLDNFRSVQTGKD--------------------------------------LNDE 80

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           ++ E  K    + +       +  D  + + K+E                 ++ L+ L K
Sbjct: 81  KEREKSKQEQKQQTVTKTQQQQQQDDLEKLRKKE-----------------QEDLEKLKK 123

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++   +  +    +   +  +  ++ +LI+I D     ++   SS   PE+  + Q I +
Sbjct: 124 QLDQYIKSM---GLTTQLDTKLNQSQLLITISDN---ALYASGSSAVKPESRKLGQAIAK 177

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L       I + GHTD  P  N    DNW LS DRA +  Q+L+ S   + ++   +G+
Sbjct: 178 MLKQYPGYEIIVAGHTDNQPISNSDFRDNWDLSSDRALNFMQILLASAQLDPKLISSTGY 237

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
              R   ++        NRR+++ +  +
Sbjct: 238 GEFRPLTSNATEAGRSKNRRVEVSLMRK 265


>gi|332558675|ref|ZP_08412997.1| MotB [Rhodobacter sphaeroides WS8N]
 gi|332276387|gb|EGJ21702.1| MotB [Rhodobacter sphaeroides WS8N]
          Length = 366

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81
            P    +W   +AD  T LMAFF+++      D+ +   +                T+  
Sbjct: 27  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124
            + D   P       + D   D   +++  D                 L++ S   +   
Sbjct: 87  TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +    +    + S      + +      + +   +     K+                + 
Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTSQPRPEPKAGPAGPGEGTGAPPGPPVG 206

Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                   Q +  ++ +    + L  +     V  E T   + +S+        F   S 
Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
              P+   V+ +I E   +    I++ GHTD  P    A  DN  L+  RA S  + L+ 
Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           SG V   RI+ +S          +      + NRRI+I +
Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362


>gi|254501723|ref|ZP_05113874.1| OmpA family protein [Labrenzia alexandrii DFL-11]
 gi|222437794|gb|EEE44473.1| OmpA family protein [Labrenzia alexandrii DFL-11]
          Length = 284

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 108/323 (33%), Gaps = 51/323 (15%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                       W + +AD M++L+ FF+++   +  D +  + +               
Sbjct: 3   RKKPQGGGGAPDWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSMREAF------- 55

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                                  +  ++ +  +++     +   + +      L +    
Sbjct: 56  ---------------------GVKDSSRKTGIIEVEGIPIRDYMKDISQVEQELDSDFAQ 94

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E  +    +  E         ++EK             +     A +    + +++  I 
Sbjct: 95  ERHEKRRKQGPEANTHDTMEAEIEKPRQ------FATAAASLRQAWQEMPEITEVSTNI- 147

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                          + E T  G+ I ++DQ    MF + S  P   T  ++ ++  VL+
Sbjct: 148 ---------------ILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRLIAQMAPVLS 192

Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                I I GHT A           W LS +RA  A Q+L + GV + +   + G +   
Sbjct: 193 RMPNRIEITGHTTAGAATVDPSYTGWDLSTERANVARQILSEYGVPDGQFYSVVGKSDTE 252

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
               +DP  +ANRR+ IL+   +
Sbjct: 253 PLFPNDPYLAANRRVGILLMAEE 275


>gi|330830039|ref|YP_004392991.1| chemotaxis protein MotB [Aeromonas veronii B565]
 gi|328805175|gb|AEB50374.1| Chemotaxis protein MotB [Aeromonas veronii B565]
          Length = 291

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 121/327 (37%), Gaps = 53/327 (16%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    + P N   W + YADFMT+L A F+V++          + + Q F          
Sbjct: 3   KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  ++  +    +    S         ++ +  +T    + + +      ++ S  
Sbjct: 53  ------IESLGKIGLISPPAGSPLMQGGTGILEPESKTTPSSPKEETVLEKDAPMAASDP 106

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 +  + S       K+ + E                   + + ++K  Q L  +I
Sbjct: 107 FNETIGASEKPSATEAWPHKTQEQEW------------------VQVTKQKLEQQLKAQI 148

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            S           K +  E   + ++I I ++    +F   S+   P+ I ++ KI  +L
Sbjct: 149 ES-----------KDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKIAGIL 194

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317
           A+    + + GHTD S       R+NW LS+ RA S  Q +L    +   R+    G A 
Sbjct: 195 ANIPGQVVVTGHTDNSQAPVELYRNNWELSVLRASSIVQTMLTNPQLDARRVIA-QGVAD 253

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            + + A+D      ANRR+DI +   +
Sbjct: 254 TQPRFANDTPEHRQANRRVDITLSQGK 280


>gi|148554180|ref|YP_001261762.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148499370|gb|ABQ67624.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 334

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 129/336 (38%), Gaps = 57/336 (16%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              +N+   + IIIKK VA     ++ G+WK+ YADF+T +MAFFL+MWI+ AT++  +K
Sbjct: 7   KRGRNEPEPRPIIIKKIVAEGHGGHHGGAWKVAYADFVTAMMAFFLLMWILGATNEKQRK 66

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            I  YF P        S G            ++       +  +K+    K  S  +K  
Sbjct: 67  GIADYFTPTMVQFKEKSAGSNGIFGGESVVDKDNYPHRAAQTGSKSISIPKDASGGEK-- 124

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                                                 D   S    +      L     
Sbjct: 125 --------------------------------------DGAGSAKSRDRVAFQKLKLLLQ 146

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             M    RL  +                   V    TR G+ I ++DQ +  MF   +  
Sbjct: 147 AKMAADPRLAKMMS----------------NVRMVETREGLRIDLVDQADFAMFRSGTDE 190

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS 302
              E   +++++ EV   +   + +RGHTDA P+ +    +NW LS  RA +  + L   
Sbjct: 191 LSSEARALMKQVAEVTNFADNSVIVRGHTDAMPYSKGRTVNNWTLSAARAEATRRALSDF 250

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           GV+  R ++I G A     +A DP +  NRR+ I +
Sbjct: 251 GVANTRFARIEGVADREPYVAGDPYDPRNRRMSITL 286


>gi|254462550|ref|ZP_05075966.1| flagellar MotB protein [Rhodobacterales bacterium HTCC2083]
 gi|206679139|gb|EDZ43626.1| flagellar MotB protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 411

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/391 (12%), Positives = 108/391 (27%), Gaps = 74/391 (18%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD   +LMAFF+++      +    K I                    
Sbjct: 21  PPVGAPAWMATFADLAILLMAFFVLILSFAEMNIPKFKQISGSLRDSFGIQRIVPVVEQP 80

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI-----------GSTNQKKQYQR 126
             +  +    +P    S  +        + +  V +               +++ ++   
Sbjct: 81  EGTTILELNFSPSPSPSITEEATQETTEVREPEVKVPTDNRDNDGKDNLNESDENREGLG 140

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
            +N          +E    ++ +         +  D + ++N       P    EK   +
Sbjct: 141 GKNADGAGDGKSDAEKFAEAIEKIGASVNVSAELVDGKVAVNLNAEQSTPEEMIEKFQRV 200

Query: 187 KRK-------------------------------------------KRLQDLAKKISSTL 203
            +                                            + +++  ++    L
Sbjct: 201 AQALEIAELATGNSENEVLYAGLDKDLSQLIGMVSVIQDQKNAIDGESIEEDKERAQKAL 260

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLPETIVVLQKI 255
                         E      L+++  +             F   S+        ++ ++
Sbjct: 261 DKAREAEAKLKANLENEIENGLVTVERREGKVFVNLGSGGAFPSGSASLTGAAQAIVAEL 320

Query: 256 GEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
                     + + GHTD  P     + RDNW L+  RA S  Q +    +  +R    +
Sbjct: 321 AATTNDPDSSVVVAGHTDNVPIGFGALYRDNWDLAAARAASVVQEIEGLNLVPEREMSAT 380

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +   R    +D       NRRI+I +E +Q
Sbjct: 381 SYGEARPIADNDTPEGREKNRRIEIEIEFKQ 411


>gi|329928770|ref|ZP_08282619.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
 gi|328937551|gb|EGG33969.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
          Length = 271

 Score =  147 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 97/320 (30%), Gaps = 72/320 (22%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
                  W I YAD +T+L+ FF+VM+ ++  D +  K + Q      ++          
Sbjct: 15  EGEQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS---------- 64

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  E  S        + H               K   Q           +Q+ E    
Sbjct: 65  GDSILEMGSGITGTADTENHKNPPPKPAADEEGEDKDTGQEPLTERELAFRAQEEE---- 120

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                                                            LA  +      
Sbjct: 121 -------------------------------------------------LANFMGLIQQY 131

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +  + + + +       GI I++ D+    +FD   +   P    VL K+  +       
Sbjct: 132 VKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKPGAAPVLGKLASLFGDLNTT 188

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322
           +SI GHTD  P    +  +DNW LS  RA S  +  L  S +      + +G+A  R   
Sbjct: 189 VSIEGHTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPGGF-QYAGYADTRPAA 247

Query: 323 ASDPMNS--ANRRIDILVED 340
            +        NRR++I V  
Sbjct: 248 DNATAEGKQKNRRVEITVLR 267


>gi|126734128|ref|ZP_01749875.1| putative chemotaxis MotB protein [Roseobacter sp. CCS2]
 gi|126716994|gb|EBA13858.1| putative chemotaxis MotB protein [Roseobacter sp. CCS2]
          Length = 278

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 109/332 (32%), Gaps = 59/332 (17%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            ++   IIK+K  I    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K +  YF
Sbjct: 4   GSNAPTIIKRKKVIAGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEQQRKGLADYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P                        N                  IG    + +      
Sbjct: 64  APTI------PINRVSGGGSGAFGGDNIFTEQTLAQSGTGISQPTIGMDPVQSETDAEAA 117

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +   +     + +  E                                     
Sbjct: 118 AAVAAQVAALRDIEAVLMGQGGE------------------------------------- 140

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                           +++D  ++ ++   T  G++I I D     +F   +++P P T 
Sbjct: 141 ---------------SMLSDQALRHIITRLTDEGLVIEIYDLPEVTLFVDDTTVPNPVTA 185

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +   +  +    +  ++++GH  A     I    W LS  RA     +L   G+   RI
Sbjct: 186 EIATIMARMFTTVSNDVAVKGHLSAKSPLQIDNPVWELSTGRAVQMRLMLQSGGLDPMRI 245

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            + SG       +        N RI++++   
Sbjct: 246 VRQSGAGDREPAVRDAT-APRNNRIEVILLRS 276


>gi|84514795|ref|ZP_01002158.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
 gi|84510954|gb|EAQ07408.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
          Length = 411

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 109/393 (27%), Gaps = 76/393 (19%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD  T+LMAFF+++      +    K I                    
Sbjct: 19  PPVGAPAWMATFADLATLLMAFFVLLLSFAEMNVPKFKQISGSLKDSFGVQKIIPVVEQP 78

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI-------------GSTNQKKQY 124
             +  +    +P    S  +        I +  + +               G T+     
Sbjct: 79  KGTTVLELNFSPSPSPSVTEEATQETTEIKEPELKIPTDNRDMDGEDKQLEGETDADGLG 138

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                NI    N   +E    +L +         +  D + +I+       P    EK  
Sbjct: 139 GETAENIADNENMSDAEKLAAALEQIGTAVNIEAEIVDGKVAIDMNAEDASPQELIEKFQ 198

Query: 185 AMKRKKRLQDLAKKISST--------------------------------LSGLVADNIV 212
            + +   +  LA   +                                  L   ++    
Sbjct: 199 RVGQAIEIAGLATGKAEQEILFGGLDETLNDLISMVSEIQRQQQESGGATLDEALSQMAR 258

Query: 213 KGVLFETTRTGILISIIDQRNTPM-------------------FDKSSSIPLPETIVVLQ 253
                      +  ++ D+ +  +                   F   S+    +   ++ 
Sbjct: 259 ATEKALEAEAQLRANLQDEIDQGLVTVEQRDGKVFVNLGAGGAFPSGSADLTLQARGIID 318

Query: 254 KIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           ++  V    T  + + GHTD  P     + RDNW L+  RA S  Q +  S  +  R   
Sbjct: 319 ELAAVTVDPTSKVVVSGHTDNVPISFGALYRDNWDLAAARAASVVQEIEASIPAPGREMS 378

Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
              F   +    +        NRRI++ +E  Q
Sbjct: 379 AISFGETKPVADNATAEGRERNRRIELEIEFEQ 411


>gi|309778972|ref|ZP_07673742.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308922319|gb|EFP67946.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 315

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 126/335 (37%), Gaps = 66/335 (19%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    K  +    G  D+ +  + S   K ++         +V  +    ++        
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPALKQNMPQPNPSPSPTVQRQRNIRDESD------ 116

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                      +  L  L ++    ++ 
Sbjct: 117 -------------------------------------------DAALNKLKQKIAEMVET 133

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     ++   L  +  + +   ++ +  R               F  +S+   P  
Sbjct: 134 NPVMSQFKHQL---LIDMTTEGLRIQIVDQQNRPM-------------FANASAEVQPYM 177

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L+++G  L      IS+ GHTDA+ +       NW LS DRA ++ + L+  G+  +
Sbjct: 178 RTILRELGSALNDVPNPISLSGHTDATQYATQHGYSNWELSADRANASRRELVAGGMKPE 237

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++S++ G         ++  N  NRRI I+V + +
Sbjct: 238 KVSRVVGLEASVPLDKANIYNPINRRISIVVLNAR 272


>gi|261409603|ref|YP_003245844.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261286066|gb|ACX68037.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
          Length = 271

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 97/320 (30%), Gaps = 72/320 (22%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
                  W I YAD +T+L+ FF+VM+ ++  D +  K + Q      ++          
Sbjct: 15  EGEQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS---------- 64

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  E  S        + H               K   Q           +Q+ E    
Sbjct: 65  GDSILEMGSGITGTADTENHKNPPPKPAADEEGEDKDNGQEPLTERELAFRAQEEE---- 120

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                                                            LA  +      
Sbjct: 121 -------------------------------------------------LANFMGLIQQY 131

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +  + + + +       GI I++ D+    +FD   +   P    VL K+  +       
Sbjct: 132 VKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKPGAAPVLGKLASLFGDLNTT 188

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322
           +SI GHTD  P    +  +DNW LS  RA S  +  L  S +      + +G+A  R   
Sbjct: 189 VSIEGHTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPAGF-QYAGYADTRPAA 247

Query: 323 ASDPMNS--ANRRIDILVED 340
            +        NRR++I V  
Sbjct: 248 DNATAEGKQKNRRVEITVLR 267


>gi|146277438|ref|YP_001167597.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555679|gb|ABP70292.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 367

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 102/344 (29%), Gaps = 37/344 (10%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--------------- 70
            P    +W   +AD  T LMAFF+++      D+ +   +                    
Sbjct: 28  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 87

Query: 71  -------PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
                  P             D     E        ++          +L++ S +    
Sbjct: 88  TVIELGMPPADPDGLHPDERSDMGGSEEPGGDAPERVAEALREALEQGELQVRSEDGSVV 147

Query: 124 YQRL----ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +         +                   +                        PP+ 
Sbjct: 148 IELPGKQAAQALAQALAEAAGVGTGPLPEPQTTAQPRPEPQAGPAGPGEGTGAPAGPPVG 207

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            E+  A+++  R +    ++ + L   VA+ +   V  E     + +S+        F  
Sbjct: 208 GEQGAALRKSVRAELDTLRLRNALDREVAEGL---VKVEQMDGKVFVSLG---AGGSFTS 261

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQV 298
            S +   +   V+ +I E   H    I++ GHTD  P      RDN  L+  RA S  + 
Sbjct: 262 GSDVLSEDARAVMSRIAEATQHPERTITVTGHTDNVPVAGGAFRDNIALAAGRAASVVRE 321

Query: 299 LMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           L+   GV   RI+ +S          +        NRRI+I + 
Sbjct: 322 LVATGGVDPGRITAVS-RGEFDPVADNATEAGRTQNRRIEIEIT 364


>gi|188579878|ref|YP_001923323.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
 gi|179343376|gb|ACB78788.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
          Length = 470

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 2/263 (0%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            +      +++P   + Q+  +      +   S +       +  +  R        +++
Sbjct: 207 PSKAKEAQKESPKATARQSLHEAMRQAGVKLASAEPMPLEAPKSVEPARPVEPTKPAADA 266

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                        +E      +   L K+  +      P    ++         L  L  
Sbjct: 267 VPETGAPEIKALPTEGKPTQPEPQRLAKA--EVPAVKEPAAGADQPAKAAETAALSALKA 324

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           +I+  +  L        +    T  G+LISI D+ N  MF   S+ P P+ +  L++I +
Sbjct: 325 EIARAVPSLPNSAPAPHLEVRRTGEGVLISITDEINFSMFGIGSAEPTPKVVKALERIAK 384

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +L      I +RGHTD  PFR+   DNWRLS  RA  A  +L++ G+ E RI +I G+A 
Sbjct: 385 ILNSRPGRIVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIERIEGYAD 444

Query: 318 HRLKIASDPMNSANRRIDILVED 340
            + +IA+DP  + NRRI+IL+  
Sbjct: 445 RQPRIAADPKAAENRRIEILLRG 467



 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 68/196 (34%), Gaps = 15/196 (7%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +   + IIIK+     +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +Y
Sbjct: 3   EHAHEIIIIKRH-GDHEDGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FNP     +T  +   ++                D    +   D      ++ ++    +
Sbjct: 62  FNPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKADAAGAPGSRARESALFQ 121

Query: 129 NNIFYLSNSQQSEHCK--------------NSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           +    L+                              E G+D       + +    +   
Sbjct: 122 DPYAVLAKLAAEAEAGPEAASADAAALEAGQPGVAGGETGRDPFDPLYWQVAALPRQRTD 181

Query: 175 LPPLSKEKILAMKRKK 190
            P        A    +
Sbjct: 182 NPGALDTVAAAPAEAR 197


>gi|170741408|ref|YP_001770063.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168195682|gb|ACA17629.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 441

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 1/274 (0%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P    +    +   +   P    ++    +     +   + + + G     K+   L 
Sbjct: 168 FDPLYWQVAPLPQARSETPGPINTVAKTPSRVDARAALPNAAREGRTGLDLVPKEIADLL 227

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                     +++  +              ++   E    + +   + P+   K      
Sbjct: 228 KPPGAKPERTEAKPAEAKPAEAKPAEAKPAEAKPAEAKPAEVKPAAVAPVDA-KAAEPGE 286

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L +L  ++   +  L        V    T  G LISI D+ N  MF+  S+ P  + 
Sbjct: 287 NAALAELKAEVLKAVQPLATGAPAPKVEVRRTGEGTLISITDELNFSMFNVGSAEPQAKV 346

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +  L++I +VL+     I +RGHTDA PF++ + DNWRLS  RA  A  +L++ GV+E R
Sbjct: 347 VKALERIAKVLSSRPGQIVLRGHTDARPFKSESYDNWRLSSARAQMAAYMLIRGGVAERR 406

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I +I G A  + +  SDPM + NRRI+IL+ ++ 
Sbjct: 407 IVRIEGHADRQPRNPSDPMAAENRRIEILLREKP 440



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 1/182 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    III ++   D+  ++  +WKI  ADFMT +M+ FLV+W++N+T  +TK AI  YF
Sbjct: 3   DEAHEIIIVRRRGDDEDGHHSAAWKIALADFMTAMMSLFLVLWLVNSTSKETKSAIADYF 62

Query: 70  NPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           NP     M+   KG+ D  N P  S +            K       GS ++ K+    +
Sbjct: 63  NPIRLAEMSPEKKGLRDPTNAPSDSGEPGKTGESKGGEGKGKDSSTSGSASRAKEAALFQ 122

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +    L+        +      S     + +            + F P   +   L   R
Sbjct: 123 DPYAVLAKLAAEADAERPGDASSADAVTVQEGKPGVTGGEAARDPFDPLYWQVAPLPQAR 182

Query: 189 KK 190
            +
Sbjct: 183 SE 184


>gi|256833230|ref|YP_003161957.1| OmpA/MotB domain-containing protein [Jonesia denitrificans DSM
           20603]
 gi|256686761|gb|ACV09654.1| OmpA/MotB domain protein [Jonesia denitrificans DSM 20603]
          Length = 305

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 100/327 (30%), Gaps = 55/327 (16%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   ++   N   W + YAD +TVL+  F+V++ ++  D    + +             
Sbjct: 8   RKKGHEEEHANHERWLVSYADMLTVLVGLFIVLYAMSQVDQAKFEQLA------------ 55

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                                  +           +        
Sbjct: 56  ------------------------------------ASLSVSFGGSGSSILSDGSSIIDA 79

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +     S+    E      ++ +     +  +       + +       +   ++L   
Sbjct: 80  NTAITPTSVEPPDEFLAAALRNDNSGSDEDSGQAGDAEEEAIDPKDMAAAQAEYENLQSL 139

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                + L    +   V +     G+++ ++       F   ++     T  V+     +
Sbjct: 140 ADRIDAALRKRGLEGSVEYRINERGLIVGLVSDE--LFFQADTARLTKTTERVVDTTARI 197

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA-YQVLMKSGVSEDRISKISGFAH 317
           L      +SI GH ++    N  + NW LS DRA     + + K  +S  RI+ + GF  
Sbjct: 198 LRELDNELSIEGHANSLQSVN-YKSNWELSSDRATQVLRRYVEKGKISGTRIAAV-GFGD 255

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
            R    +D       NRR+DI++   Q
Sbjct: 256 TRPLADNDTKRGLKINRRVDIVILSSQ 282


>gi|86136711|ref|ZP_01055289.1| chemotaxis protein MotB [Roseobacter sp. MED193]
 gi|85826035|gb|EAQ46232.1| chemotaxis protein MotB [Roseobacter sp. MED193]
          Length = 277

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 123/332 (37%), Gaps = 59/332 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q     IIIKKK       ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K +  Y
Sbjct: 4   QNGLAPIIIKKKKVSGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P                 P  R S         + +    +  + G+           
Sbjct: 64  FSP---------------SIPLSRISGGGNGAFQGDSMFTEDIQPQSGT----------- 97

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                        +  ++     E G    +  + +      E        +  +     
Sbjct: 98  --------GASDINPMDAQKAQGETGVSDAEKAEEDSKFRAIEEQLQGRGGESMVSVE-- 147

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                                 + + ++   T  G+++ + +     +F+   + P P  
Sbjct: 148 ----------------------MSRHIITRVTDEGLIVELFETDGVSLFEAGGAEPTPLF 185

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++ +  V A  T  I+I GH  + P        W +S  RA  A  +L   G+   R
Sbjct: 186 RDLVRMVARVSASVTNDIAISGHIQSHPVVLAQNPVWEMSHARANVARTLLESGGMKSSR 245

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           I +I+G A  +L + + PM   N R++I++  
Sbjct: 246 IHRITGHADRKLAVTN-PMAVRNNRVEIILLR 276


>gi|254487666|ref|ZP_05100871.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
 gi|214044535|gb|EEB85173.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
          Length = 280

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 119/336 (35%), Gaps = 57/336 (16%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
                 N   +IIK+K  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K 
Sbjct: 2   EMAAHANAAPVIIKRKKVVKGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEQQRKG 61

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  YF P                          I+            +         K  
Sbjct: 62  LADYFTPTIA-----------------------INRISGGGDGLFGGESIFTEMTLPKNG 98

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
               + +  +   +  +    +   D E   +L K  D +      E+  +  +++  I 
Sbjct: 99  TGATSPMTPVEGQESGDVGAGTNGPDEEGNAELFKVVDAQLMGRGGESMVMDNIARHVIT 158

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
               +  + +L                                  D  + P+F      P
Sbjct: 159 RQTEEGMVIEL---------------------------------FDVEDVPLFKNGGDQP 185

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 +L+ I +     T  I++  H  ++P   +    W LS  R      +L K GV
Sbjct: 186 TQMLRELLEVIVDASKIVTNKIAVAAHVRSNPIVAVENPVWDLSAKRGTQTRILLEKLGV 245

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
              RI +++GFA  +   A D M+  N R++I++  
Sbjct: 246 KPARIERVTGFADRKP-AAIDTMDVRNNRVEIILLR 280


>gi|269796387|ref|YP_003315842.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
 gi|269098572|gb|ACZ23008.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
          Length = 295

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 107/322 (33%), Gaps = 61/322 (18%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           ++   +   W + YAD MTVL+A F+V++ I+  D+     + Q                
Sbjct: 15  EEEHEDSERWLVSYADMMTVLVALFIVLYAISQVDEVKYDQLRQSLAAGF---------- 64

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
                                    N+  + I S             +    +       
Sbjct: 65  -------------------------NAPQVSILSDGAGVLTDNPTEAVVPAVDKIIPSTV 99

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             S + D         +            Y                +   +LA+KI + L
Sbjct: 100 DESTSGDGGDSTGAGDAASPADIAAARVEY----------------QSFAELAEKIDTAL 143

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    +     V F     G++I +I       F   S++  P +  V+  +   +    
Sbjct: 144 AAGGMEG---VVQFRIDERGLVIGMITDE--VFFASESAVLTPTSQAVVDTMTPFMLPLP 198

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             ISI GH D+ P       NW LS DRA    + ++++ G+   RIS + G+   R   
Sbjct: 199 NEISIEGHADSVPTA-RYASNWELSSDRATQVLRRMVEADGMPPTRISAV-GYGDSRPLQ 256

Query: 323 ASDPMNS--ANRRIDILVEDRQ 342
            ++      ANRR+D++V   Q
Sbjct: 257 PNETAEGLTANRRVDLVVLSDQ 278


>gi|307944455|ref|ZP_07659795.1| OmpA/MotB [Roseibium sp. TrichSKD4]
 gi|307772204|gb|EFO31425.1| OmpA/MotB [Roseibium sp. TrichSKD4]
          Length = 284

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 113/312 (36%), Gaps = 51/312 (16%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W + +AD M++L+ FF+++   +  D +  + +                        
Sbjct: 12  APEWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSM-------------------- 51

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                    +    +  ++ +  +++     ++  + +      + +    E       +
Sbjct: 52  --------AEAFGVKENSRKTGVIEVEGIPIRQYMKDISQVEQDMDSDFSEEVHDRKRKQ 103

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
             E      +  ++E+             +     A +    + +++  I          
Sbjct: 104 GPEANTHETEEAEIERPRQ------FATAAASLRQAWQEMPEITEISSNI---------- 147

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                 + E +  G+ I ++DQ    MF + S  P   T  +L K+  VL+     + I 
Sbjct: 148 ------ILEESEEGLNIMLVDQDGRSMFREGSKYPYETTRRLLAKMAPVLSQMPNRVEIT 201

Query: 270 GHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT A     + A   W LS +RA  A Q+L + GV  ++   + G +       +DP  
Sbjct: 202 GHTTAGGRSVDPAYTGWDLSAERANVARQILAEYGVPSNQFYAVIGKSDSEPLFPNDPYL 261

Query: 329 SANRRIDILVED 340
           ++NRR++IL++ 
Sbjct: 262 ASNRRVEILLKA 273


>gi|292492681|ref|YP_003528120.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291581276|gb|ADE15733.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 282

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 101/325 (31%), Gaps = 73/325 (22%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +   +W I  AD M++LM+FF+++   +  D    K +               
Sbjct: 10  NEPQEEKSGAPAWVITLADLMSLLMSFFVLLLSFSELDLQKYKQVA-------------- 55

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                            +  +          +   G++   +++             +Q 
Sbjct: 56  ---------------GSMKFAFGVQREIKVKEPPKGTSIIAQEFSPGRPRPTPWDEIRQD 100

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +   T D                                      + R++D   K++
Sbjct: 101 TIDETKQTLDF------------------------------------SEARIRDTEAKVA 124

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              + L  +     ++ E     I+I I ++     F   S+    +   VL K+  VL 
Sbjct: 125 ELQNMLQNEIDQGLIVLERIGEQIIIRIQEK---GSFPSGSASFNQDFKPVLDKLRTVLN 181

Query: 261 HSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318
                I + GHTD  P   +  R NW LS  RA S    L  +  ++  R   I G A  
Sbjct: 182 RIEGKIVVAGHTDDLPIHTSRFRSNWELSTARAVSVIHHLFATDEIAPQRFV-IEGHADT 240

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
           +    +D   +   NRRI+I +   
Sbjct: 241 QPLAPNDTAENRVHNRRIEITIMPS 265


>gi|163850073|ref|YP_001638116.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|163661678|gb|ABY29045.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
          Length = 468

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           +     +          +    + G    +   E +         D              
Sbjct: 183 NPGALDSAATAPADSRLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGIKLASAEP 242

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                            +        K +    +   K                      
Sbjct: 243 MPLTIPSAEPTKPSAEAAPLASPAEAKPAPPEPTLLAKAEAPPAKDLAPAKDLAPAKELA 302

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              ++      +  L  L  +I+  +  L        V    T  G+LISI D+ N  MF
Sbjct: 303 APADQAAKAAERAALSALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMF 362

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              S+ P P+ +  L++I ++L      + +RGHTD  PFR+   DNWRLS  RA  A  
Sbjct: 363 GIGSAEPTPKVVKALERIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASY 422

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +L++ G+ E RI +I G+A  + +IA++P  + NRRI+IL+  
Sbjct: 423 MLVRGGLDEARIDRIEGYADRQPRIANNPKAAENRRIEILLRG 465



 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 75/241 (31%), Gaps = 14/241 (5%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    III K+    +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +YF
Sbjct: 3   DRPHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           NP     +T  +   ++                D    +   D      ++ ++    ++
Sbjct: 63  NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN--------------YFL 175
               L+               ++          +       +                  
Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDPFDPLYWQVAALPRRRTD 182

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
            P + +         RL   A+   S       ++         +       I      P
Sbjct: 183 NPGALDSAATAPADSRLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGIKLASAEP 242

Query: 236 M 236
           M
Sbjct: 243 M 243


>gi|254559218|ref|YP_003066313.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
 gi|254266496|emb|CAX22260.1| Chemotaxis protein MotB [Methylobacterium extorquens DM4]
          Length = 474

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 100/256 (39%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           +      R S +         +           + +  +       +   + ++ +    
Sbjct: 216 ESAKDIARQSLSDAMRQAGVKLASAEPMPLTVPSAEPAKPSAEAAPLASPAEAKPAPPEP 275

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
             L +                               ++         L  L  +I+  + 
Sbjct: 276 TLLAKAEAPPAKDFAPAKDLAPAKDLAPAKELAAPADQAAKAAETAALSALKAEIARAVP 335

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            L        V    T  G+LISI D+ N  MF   S+ P P+ +  L++I ++L     
Sbjct: 336 SLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPG 395

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + +RGHTD  PFR+   DNWRLS  RA  A  +L++ G+ E RI +I G+A  + +IA+
Sbjct: 396 RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIAN 455

Query: 325 DPMNSANRRIDILVED 340
           +P  + NRRI+IL+  
Sbjct: 456 NPKAAENRRIEILLRG 471



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 61/163 (37%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    III K+    +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +YF
Sbjct: 3   DRAHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           NP     +T  +   ++                D    +   D      ++ ++    ++
Sbjct: 63  NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
               L+               ++          +       + 
Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDP 165


>gi|149189846|ref|ZP_01868126.1| chemotaxis LafU protein [Vibrio shilonii AK1]
 gi|148836332|gb|EDL53289.1| chemotaxis LafU protein [Vibrio shilonii AK1]
          Length = 329

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 60/331 (18%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+     D   + G+WK+  ADFM  LMA FLV+W++   D + +KAI  +  
Sbjct: 3   KQEQVVFKRSGRRHDHEYHGGAWKVALADFMIALMALFLVLWVMQVVDKEERKAIVAHLQ 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +T     +   ++  +         
Sbjct: 63  MASVFDKSTGSLFDTSQ------SISPIDLASDSSVTSRHDSVHTVTSFFQGDRD----- 111

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                        P            ++
Sbjct: 112 --------------------------------------------GPESDSLINGTFDTQE 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           RL+ LAK ++  +  + AD     V    T  G+ I + D     MF +  S   P    
Sbjct: 128 RLEALAKVVNEMMRQINADG---NVDVTVTPQGLRIVLQDDYKQNMFRRGGSTLTPFFED 184

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS--LDRAYSAYQVLMKSGVSEDR 308
           +L  +  V       + I GHTDA+ +R     +        RA SA Q L+  G+ E R
Sbjct: 185 LLLALAPVFQRVENPMIISGHTDATQYRKAFSSSSNWELSSSRANSARQTLVAGGMPEQR 244

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           + +++G +   L    DP +S NRRI++ + 
Sbjct: 245 VLQVTGMSDRALLNQQDPKSSENRRIELFIL 275


>gi|240137207|ref|YP_002961676.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
 gi|240007173|gb|ACS38399.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
          Length = 468

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 97/267 (36%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +    + G    +   E +         D                              
Sbjct: 199 LDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASAEPMPLTVPSAEPAKPSPE 258

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +        K +    +   K                         ++         L 
Sbjct: 259 AAPLASPAEAKPAPPEPTLLAKAEAPPAKDFTPAKDLAPAKELAAPADQAAKAAETAALS 318

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L  +I+  +  L        V    T  G+LISI D+ N  MF   S+ P P+ +  L+
Sbjct: 319 ALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALE 378

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +I ++L      + +RGHTD  PFR+   DNWRLS  RA  A  +L++ G+ E RI +I 
Sbjct: 379 RIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIE 438

Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340
           G+A  + +IA++P  + NRRI+IL+  
Sbjct: 439 GYADRQPRIANNPKAAENRRIEILLRG 465



 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 61/163 (37%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    III K+    +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +YF
Sbjct: 3   DRAHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           NP     +T  +   ++                D    +   D      ++ ++    ++
Sbjct: 63  NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
               L+               ++          +       + 
Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDP 165


>gi|170741247|ref|YP_001769902.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168195521|gb|ACA17468.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 277

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 110/327 (33%), Gaps = 62/327 (18%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + ++K       +    W + +AD M +LM+FF+++   +  D    +A+   F      
Sbjct: 1   MARRKRGGAHGGHG---WFVTFADLMALLMSFFVMVCAYSTQDQRKLQAVAGSFRDAFGV 57

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +      E++                                               
Sbjct: 58  NKESRFNGIIEKDGLP-------------------------------------------- 73

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            S         +T D    +      D        +N F            +  + L D+
Sbjct: 74  -SATRLRDLRPVTPDKASDRTTPPLPDEVFDNGVPQNGFRDGFGLAMASLRQALQDLPDI 132

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A+             + K VL   T  G+ +S++DQ    MF   S+ P   T  VL+++
Sbjct: 133 AE-------------LSKNVLIHETARGLDVSLVDQDGRSMFPDGSTRPNDRTRQVLERL 179

Query: 256 GEVLAHSTEVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +   +  I+I G+T A  P        W LS  RA S  ++L  +GV ++R + +SG
Sbjct: 180 APAIRRMSNKIAISGYTAATRPGLRAPAPPWELSAGRAISVREILASNGVPDERFTVVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341
            A        +P  +ANRR+ I +   
Sbjct: 240 KADTEPLFPDNPYIAANRRVTITLLRD 266


>gi|149203099|ref|ZP_01880070.1| OmpA/MotB [Roseovarius sp. TM1035]
 gi|149143645|gb|EDM31681.1| OmpA/MotB [Roseovarius sp. TM1035]
          Length = 287

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 54/334 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N + +IIK+K  +    ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K I  Y
Sbjct: 4   QSNAKPVIIKRKKVVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEQQRKGISDY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P                 P  R+S         E +      L+ GS   +       
Sbjct: 64  FSPTV---------------PISRTSGGGDGAFGGESVFSQETLLQSGSGASQP------ 102

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                          S  +   +   E   L    +    A   
Sbjct: 103 ---------------------------LATSSQQVRGEMGLVEGGNLSADQEADAQAFST 135

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            + +         +   +V+D++++ ++   T  G++I I +     +F+   + P    
Sbjct: 136 IEAM-----LTGRSGESMVSDDLLRHIVTRVTDEGLVIEIFELPGALLFEPDQTSPTRLL 190

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +   +           ++ GHT A P   +    W LS  R     Q L  +G++  R
Sbjct: 191 QDLSMLLASAANLVINDAALAGHTRARPITLVRNPVWDLSTARVDQFRQRLEDAGLAAKR 250

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I +I+G A     ++ DPM+  N R+++++   +
Sbjct: 251 IRRIAGHADRSPAVS-DPMDLRNNRLELILLRSE 283


>gi|126463722|ref|YP_001044836.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559779|ref|ZP_08414101.1| MotB2 [Rhodobacter sphaeroides WS8N]
 gi|126105386|gb|ABN78064.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332277491|gb|EGJ22806.1| MotB2 [Rhodobacter sphaeroides WS8N]
          Length = 278

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 67/336 (19%), Positives = 130/336 (38%), Gaps = 62/336 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             Q N   ++IK+K  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +    
Sbjct: 2   AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQR---- 57

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                         KG+ D  NP    ++                D  +  T       R
Sbjct: 58  --------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAANDR 103

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                               + ++    
Sbjct: 104 ------------------------------------------ATAELKASGETGQEGADA 121

Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +K+L+++ K + + +   +    +++ V+   T  G++I I D  + P+F   +  P 
Sbjct: 122 AEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQPE 181

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                + + + E+L  +T  I++ GH  + P   I    W +S  RA     +L   G+ 
Sbjct: 182 AVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEGLP 241

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +R+ ++SGFA  +  +  DPM   N R+++++  R
Sbjct: 242 GERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 276


>gi|294675563|ref|YP_003576178.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003]
 gi|294474383|gb|ADE83771.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003]
          Length = 283

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 122/332 (36%), Gaps = 55/332 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
            +    +IIK+K  +    ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K I  Y
Sbjct: 4   HDGVAPVIIKRKKVVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGIADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FNP       +  G          S                + + +    +         
Sbjct: 64  FNPTIPINRISGGGEGAFGGDSVFSEDQVAQNGTGASGQMPTEERQARGDSGA------- 116

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                          K    +D  +   + K  +   S    E+     L+         
Sbjct: 117 --------------AKEEQKQDQAEFDRMAKEIEKALSATSGESMVSEQLA--------- 153

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                                   + ++ + T  G+++   D  + P+F   ++ P P  
Sbjct: 154 ------------------------RHIVTKVTDEGLIVEFFDLEDEPLFRPDTAEPEPIL 189

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +   +  V   +   ++I GHT + P        W LS +RA     ++  +G    R
Sbjct: 190 GEIAGMLTRVFGLTKNNVAINGHTRSYPSMLRTNPVWDLSSERAQRMRILMETAGFDAAR 249

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + ++SGFA  +  + +  M+  N R+++++  
Sbjct: 250 LQRVSGFADRKPAVETR-MSVRNNRLELILLR 280


>gi|315649793|ref|ZP_07902876.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
 gi|315274767|gb|EFU38148.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
          Length = 270

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 107/323 (33%), Gaps = 73/323 (22%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
             D  +    W I YAD +T+L+ FF+VM+ ++  D +  K + Q      ++       
Sbjct: 12  KQDGSDQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS------- 64

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
                +  E  S        + H                                     
Sbjct: 65  ---GDSILEMGSGITGTADTENHKNPPP-------------------------------- 89

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            + ++T D E+       T+ E +   +E                     ++LA  +   
Sbjct: 90  -QTAVTEDKEEDNGEAPLTERELAFRAQE---------------------EELANFMGLI 127

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              +  + + + +       GI I++ D+    +FD   +        VL K+  +    
Sbjct: 128 QQYVKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKSGAAPVLGKLASLFGDL 184

Query: 263 TEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHR 319
              +SI GHTD  P    +  +DNW LS  RA S  +  L  S +      + +G+A  R
Sbjct: 185 NTTVSIEGHTDNVPIGRHSSYKDNWELSGARAMSVLRFFLEDSKLDPAGF-QYAGYADTR 243

Query: 320 LKIASDPMNS--ANRRIDILVED 340
               +        NRR++I V  
Sbjct: 244 PAADNATPEGKQKNRRVEITVLR 266


>gi|77464880|ref|YP_354384.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389298|gb|ABA80483.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides 2.4.1]
          Length = 278

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 67/336 (19%), Positives = 129/336 (38%), Gaps = 62/336 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             Q N   ++IK+K  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +    
Sbjct: 2   AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQR---- 57

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                         KG+ D  NP    ++                D  +  T       R
Sbjct: 58  --------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAANDR 103

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                                                                 ++    
Sbjct: 104 ------------------------------------------ATAELKASGEMGQEGADA 121

Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +K+L+++ K + + +   +    +++ V+   T  G++I I D  + P+F   +  P 
Sbjct: 122 AEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQPE 181

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                + + + E+L  +T  I++ GH  + P   I    W +S  RA     +L   G+ 
Sbjct: 182 AVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEGLP 241

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +R+ ++SGFA  +  +  DPM   N R+++++  R
Sbjct: 242 GERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 276


>gi|118588413|ref|ZP_01545822.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
 gi|118439119|gb|EAV45751.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
          Length = 285

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 108/314 (34%), Gaps = 51/314 (16%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W + +AD M++L+ FF+++   +  D +  + +            ++ K    E   
Sbjct: 13  APDWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSMREAFGVKDSSRKTGIIEVEG 72

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                  K    +++ +  +    +     ++       + +                  
Sbjct: 73  IPIRDYMKDISQVEQEMDSDFSQERHEKRRKQGPEANTHDTLEADIE------------- 119

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                                +       +     A +    + +++  I          
Sbjct: 120 ---------------------KPRQFATAAASLRQAWQEMPEITEISSNI---------- 148

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                 + E T  G+ I ++DQ    MF + S  P   T  ++ K+  VL+     I I 
Sbjct: 149 ------ILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRLIAKMAPVLSQMPNRIEIT 202

Query: 270 GHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT A     + +   W LS +RA  A Q+L + GV +++   + G A       +DP  
Sbjct: 203 GHTTAGRQSIDPSYTGWELSSERANIARQILSEYGVPDNQFYSVVGKADTEPLFPNDPYL 262

Query: 329 SANRRIDILVEDRQ 342
           +ANRRI IL++  +
Sbjct: 263 AANRRIGILLKAEE 276


>gi|94312620|ref|YP_585829.1| flagellar motor rotation proteinOmpA/MotB [Cupriavidus
           metallidurans CH34]
 gi|93356472|gb|ABF10560.1| OmpA/MotB, protein that enables flagellar motor rotation
           [Cupriavidus metallidurans CH34]
          Length = 325

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 66/332 (19%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           + I+IKK       P+   SWKI YADFMT +MA FLV+W+++++       + +YF   
Sbjct: 8   RPIVIKK-AKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVAEYFRTP 66

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            K  +          +                                            
Sbjct: 67  LKVAIAGGDKSSLSTSVIPGGG-------------------------------------- 88

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                        +   +  K +    + D ++  ++ E+  L  L K     ++    L
Sbjct: 89  ---------KDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENNPVL 139

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +                     +L + T  G+ I I+D +N PMF   S+   P    +L
Sbjct: 140 RQ----------------FRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMRTIL 183

Query: 253 QKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           ++IG VL      +S+ GHTD++ +     A  NW LS DRA ++ Q L+  G+ E ++ 
Sbjct: 184 REIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEGKLL 243

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ G A       +DP+   NRRI I+V +++
Sbjct: 244 RVLGLADTMPLEKNDPLAPVNRRISIVVLNQR 275


>gi|77359764|ref|YP_339339.1| chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
 gi|76874675|emb|CAI85896.1| putative chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 319

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 112/324 (34%), Gaps = 65/324 (20%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++         +   W + YAD+MT++ AFF+V++ I    ++  + +            
Sbjct: 4   RRLRNTTTKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEEKFQVLSDSIGYVFDKSA 63

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                        ++ +    D  + + +T     L   S  +++   +L +     SN 
Sbjct: 64  RQHS---------QQGTGVNGDAILTDRVTPEQEVLYGESILKEEHGPKLLDGQSDTSNI 114

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q    K                                               L  L  
Sbjct: 115 EQKLLGKP----------------------------------------------LDSLLA 128

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           K+ S+L   + D        E ++  ++I +    +  +F   SS+       V++ I +
Sbjct: 129 KLQSSLIDEIRDGEA---SLELSQDWLIIEL---SSGMLFSSGSSVAQVRAKQVVKIIKD 182

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           ++A     I +RG+TD     N   R NW LS+ RA +    L   G++  R+  I G+ 
Sbjct: 183 IIAPVDNYIRVRGYTDNQTIGNEMYRSNWELSVARATAVLVELESLGINSARM-AIEGYG 241

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
            +     +D     + NR++ I +
Sbjct: 242 QYSPFATNDTKQGRAENRKVVIAL 265


>gi|254564195|ref|YP_003071290.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
 gi|254271473|emb|CAX27488.1| putative chemotaxis protein MotB [Methylobacterium extorquens DM4]
          Length = 277

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 59/323 (18%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                  +    W + +AD M +LM+FF+++   +  D    + +               
Sbjct: 3   KKKRGGAHGGHGWFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR---------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                             D       +K +  L+        +++ L +     +  + +
Sbjct: 53  ------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERATDRTT 94

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +S   D    +    +                  +     AM+    + +L+K   
Sbjct: 95  PPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAELSKN-- 138

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+    R G+ +SI+DQ    MF + SS P   T  +L+++   L 
Sbjct: 139 --------------VIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLTPTLM 184

Query: 261 HSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                I++ G T    P        W LS +RA S   VL  +G+ +DR + ++G A   
Sbjct: 185 KLPNRIAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTE 244

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
                +P  +ANRR+ + +    
Sbjct: 245 PMFPDNPYLAANRRVTVTLLAEP 267


>gi|259417151|ref|ZP_05741070.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346057|gb|EEW57871.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 279

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 117/310 (37%), Gaps = 57/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MW++NAT +  +K +  YF+P       +  G    Q    
Sbjct: 27  AWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGGNGAFQG--- 83

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                  D    E +   +               + +  +     S ++E          
Sbjct: 84  -------DTMFTEDVKPQNGIGATKENPTDASRSQGDTGVADDQQSDEAEEANF------ 130

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                                                   L+     +      +V+ ++
Sbjct: 131 ----------------------------------------LKIEEALMGRGGESMVSIDM 150

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + ++   T  G++I + +  +  +F+  S  P      +L+ +  V A     ++I GH
Sbjct: 151 ARHIVTRVTDEGLIIELFETEDAKLFENGSERPTILMRDLLRMVARVTASVENNVAIGGH 210

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
             ++P        W LS  RA +  ++L   G+   RIS+++G+A      + +PM++ N
Sbjct: 211 VASTPVVIANNPVWALSHARADATRELLETGGMQAKRISRVTGYADRD-LASKNPMSARN 269

Query: 332 RRIDILVEDR 341
            RI+I +  +
Sbjct: 270 NRINITLLRK 279


>gi|115523189|ref|YP_780100.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisA53]
 gi|115517136|gb|ABJ05120.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 423

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 106/277 (38%), Gaps = 5/277 (1%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ---KKQ 123
              +P  K  +   +   D  +P      +   L       K   +L          + Q
Sbjct: 146 TSLDPGRKEGVKGGEAYRDPFDPISWPMASSSPLEDKALGRKEIGNLPFDEDAAGLIEGQ 205

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            +R    +   + +  +               D  K   L      +        +  + 
Sbjct: 206 GRRPSQGVPDATAAPAAPSEAAQPPPAKPDQPDNPKPVRLFADEGPKLQPPAERAAAPRP 265

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                +     L   I++ L+ L             T  G+LI++ D  N  MF   S+ 
Sbjct: 266 DPAPAQSSASKLQAAINAALASL--GAAHPATEVRETSEGLLINLTDDANYGMFANGSAE 323

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P P  +  L KI  +++    ++ +RGHTD  P+R+   DNWRLS  RA+ A+ +L++ G
Sbjct: 324 PTPGLVRTLDKITPLISQQRGLVIVRGHTDDRPYRSADYDNWRLSTARAHMAFHMLIRGG 383

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +   RI +I G+A  R K  +DP    NRRI+IL+  
Sbjct: 384 LDAKRIERIEGYADRRPKTPNDPSAPQNRRIEILIRA 420



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 6/170 (3%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +Q+  + III+++  +D      G WKI YADFMT +MAFFLVMW+++AT  +T++++ 
Sbjct: 2   ADQDRPELIIIRRRSDLDVEEK-SGVWKIAYADFMTAMMAFFLVMWLMSATTPETRESVA 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP      T      D +   +    +       E         K G   Q+ Q  +
Sbjct: 61  TYFNPIKLTDSTP-----DRKGLHDAKRVDPGKADEGETARPKPEPDKAGEATQRPQLPK 115

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
             ++   L     +   + +                 ++ +   E Y  P
Sbjct: 116 THHDEAALFRDPYTILSEIAGAPPPLAQNGTSLDPGRKEGVKGGEAYRDP 165


>gi|188584558|ref|YP_001928003.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
 gi|179348056|gb|ACB83468.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
          Length = 277

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 115/328 (35%), Gaps = 62/328 (18%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK       +    W + +AD M +LM+FF+++   +  D    + +          
Sbjct: 1   MAKKKRGGAHGGHG---WFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR----- 52

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                                  D       +K +  L+        +++ L +     +
Sbjct: 53  -----------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERA 89

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             + +    +S   D    +    +                  +     AM+    + +L
Sbjct: 90  TDRTTPPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAEL 135

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +K                 V+   +R G+ +SI+DQ    MF + SS P   T  +L+++
Sbjct: 136 SKN----------------VIIAPSRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERL 179

Query: 256 GEVLAHSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L   +  I++ G T  A P        W LS +RA S   VL  +G+ +DR + ++G
Sbjct: 180 APTLMKLSNRIAVTGFTATARPGTRDTAPPWELSANRALSVRDVLANAGLPDDRFASVAG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
            A        +P  +ANRR+ + +    
Sbjct: 240 KADTEPMFPDNPYLAANRRVTVTLLSEP 267


>gi|120553254|ref|YP_957605.1| flagellar motor protein MotB [Marinobacter aquaeolei VT8]
 gi|120323103|gb|ABM17418.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 305

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 108/321 (33%), Gaps = 65/321 (20%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            ++    + +W + +AD M++LM FF+++   +  D    K I                 
Sbjct: 5   PEEEKPGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q         +    I +  +    +  + +  ++                     
Sbjct: 54  AFGVQREVPALEIPQGTSPIFDKFSPAPPEPTVVNEVKQTTTD----------------- 96

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                                      +         +EK +    ++++     +I   
Sbjct: 97  --------------------------VQPEIQTLKSPEEKAIEETIQEQMDANMARILEV 130

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   + D     +     +  I+I I ++     F   S+    E   +L  + EVLA  
Sbjct: 131 LEPAILDG---RINVSEDQRRIIIRIEEK---GSFASGSAQLTWEFEGLLMDMAEVLADM 184

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLS-LDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              ++I GHTD  P R      NW LS    A  A  +L +  V+ DRI +++G A    
Sbjct: 185 PGDLAIEGHTDNVPIRTERFYSNWDLSAARAAAVANVLLAREQVTPDRI-RVTGLADTEP 243

Query: 321 KIASDP--MNSANRRIDILVE 339
           ++ +      + NRR++I+++
Sbjct: 244 RVPNTSPENRAKNRRVEIVID 264


>gi|289548706|ref|YP_003473694.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
 gi|289182323|gb|ADC89567.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
          Length = 243

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +  + + +           + +  +E      L +     ++  ++ Q + K+I    
Sbjct: 37  AQAGKQAALEYAQAFARAFGMRLVPYQETLPRQILPQPVPPKVRPTEKGQKILKQIMELE 96

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L    +   +       GI + + ++    +FD  S+   P+   +L KI E+L    
Sbjct: 97  KTLKTIGLEGKLKVAYEAIGIRLILQERL---LFDSGSADIKPQFYPILDKIAELLNSIP 153

Query: 264 EVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             + + GHTD  P        NW LS  RA S  +  +  GVS DR+   SG+A  R   
Sbjct: 154 NPVEVEGHTDNIPISTGRFPSNWELSTARASSVVRYFIAKGVSPDRLKA-SGYADTRPIA 212

Query: 323 ASDPMNSA--NRRIDILVEDRQG 343
           ++        NRR++I++ + +G
Sbjct: 213 SNATPEGREQNRRVEIVIINIKG 235



 Score = 60.4 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +       W I YADF+T+L+  F+ ++ +            Q F       + 
Sbjct: 3   RRKKCPEE--VSERWAIPYADFLTLLLCLFIALFAMAQAGKQAALEYAQAFARAFGMRLV 60

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
             +     Q  P+            + I K  ++L+
Sbjct: 61  PYQETLPRQILPQPVPPKVRPTEKGQKILKQIMELE 96


>gi|218778865|ref|YP_002430183.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760249|gb|ACL02715.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 259

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 110/325 (33%), Gaps = 72/325 (22%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   +    +   W + +AD +T+LM FF+++  +++ D    + +   F          
Sbjct: 3   KQPKEIESPDTTMWMVTFADLVTLLMTFFVLLLTMSSMDTKALQTMFTLF---------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                         +   +D S    ++    D  +             + +  L+    
Sbjct: 53  ------------AGASGPLDFSPYGKVSPMQGDADMTPGPLDGMSPDNVDMLTTLTEILD 100

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                           +Y   P +  K L ++ +  ++ L    
Sbjct: 101 ------------------------------NSDYIKEPEAILKRLTVRSRDVVKQL---- 126

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                    +     +       G++++      T MFD  SS   PE   +L  + +VL
Sbjct: 127 --------TERYTDQIYVNEDERGVVLTF---DETVMFDPGSSRIRPEIYPLLDVLAQVL 175

Query: 260 AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAH 317
              +  + I GH+D++P  +     NW LSL RA +       +  +SEDR+  + G  +
Sbjct: 176 KAVSGRVLIIGHSDSTPMHSVQYDSNWDLSLSRALNVLYYFTTEHDLSEDRLG-VGGMGN 234

Query: 318 HRLKIASDPMNSA--NRRIDILVED 340
            +   ++        NRR++I++  
Sbjct: 235 TKPIASNKTQAGRDKNRRVEIVITK 259


>gi|254491010|ref|ZP_05104191.1| OmpA family protein [Methylophaga thiooxidans DMS010]
 gi|224463523|gb|EEF79791.1| OmpA family protein [Methylophaga thiooxydans DMS010]
          Length = 263

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 70/321 (21%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +N+  +   +AD MT+LM FF+++  +   D    K + +            
Sbjct: 2   KSRSQKPVDNVPRYMGTFADLMTLLMCFFVLLVAMAEIDALKFKMVVRSME--------- 52

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              D    +    +  ++ +G++  K+ +               
Sbjct: 53  -------------------DAFGVQRPEPDEPEIIMGTSVIKQTFS-------------- 79

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                 +   S  ++ +       K +  A+    R+Q L   +
Sbjct: 80  -----------------TAAPKETPLSTVRQASDSDKDALKVEDAAVYEAARMQTLMDDL 122

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   S  + +++   +  E     I+I I ++     F    +      + VL  I E L
Sbjct: 123 TKKFSTAINNDL---LSLEQLPDRIMIRINEKT---SFTSGGAKLKTAFLPVLSLIAETL 176

Query: 260 AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
           A   +   + GH+D  P R    R NW LS  RA S    L++   +   +  +I  +A 
Sbjct: 177 AELDDTFIVSGHSDNVPLRSGNYRSNWELSGARATSVVHALLRHPKLVPSQF-RIEAYAD 235

Query: 318 HRLKIASDPMNSA--NRRIDI 336
            +   ++D       NRR++I
Sbjct: 236 TQPVESNDTAAGRATNRRVEI 256


>gi|163854227|ref|YP_001642270.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|218533172|ref|YP_002423988.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|240141687|ref|YP_002966167.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
 gi|163665832|gb|ABY33199.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
 gi|218525475|gb|ACK86060.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|240011664|gb|ACS42890.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
          Length = 277

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 59/323 (18%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                  +    W + +AD M +LM+FF+++   +  D    + +               
Sbjct: 3   KKKRGGAHGGHGWFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR---------- 52

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                             D       +K +  L+        +++ L +     +  + +
Sbjct: 53  ------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERATDRTT 94

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +S   D    +    +                  +     AM+    + +L+K   
Sbjct: 95  PPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAELSKN-- 138

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+    R G+ +SI+DQ    MF + SS P   T  +L+++   L 
Sbjct: 139 --------------VIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLAPTLM 184

Query: 261 HSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                I++ G T    P        W LS +RA S   VL  +G+ +DR + ++G A   
Sbjct: 185 KLPNRIAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTE 244

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
                +P  +ANRR+ + +    
Sbjct: 245 PMFPDNPYLAANRRVTVTLLAEP 267


>gi|253577343|ref|ZP_04854660.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251843243|gb|EES71274.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 269

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 121/329 (36%), Gaps = 83/329 (25%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K K   D   +   SW + Y+D MT+++A F+V++                         
Sbjct: 4   KNKKHQDHEEHADESWLLPYSDLMTLMLALFIVLY------------------------- 38

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                             + +D    + +++    +  G T+   Q   + NN   LS  
Sbjct: 39  ----------------GMSTVDAMKFQEMSEAFKSVLTGGTSVLDQNAMISNNKTSLSEI 82

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +  +  ++ L                              ++K+  L  + ++ L+ L K
Sbjct: 83  ETPKSTQDGL------------------------------MTKKNELKRQEQQNLEALKK 112

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++ + +     + +   +  +  ++ ++I+I D+    +F    ++  PE   + + I  
Sbjct: 113 QLDTYIKE---NGLTDDLETKLNQSQLMITISDK---ALFASGEAVVKPEARQLAKAISN 166

Query: 258 VLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYS-AYQVLMKSGVSEDRISKISG 314
           +L    +  + + GHTD  P        NW LS  RA +    +L+ + +   + S I G
Sbjct: 167 MLQQFPDYEVIVSGHTDNVPISTYEFPSNWDLSSVRALNFMKILLLNTNLDPKKFSAI-G 225

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDR 341
           +  +    ++D     + NRR+++ +  +
Sbjct: 226 YGEYHPVASNDTAAGRAQNRRVEVSIIRK 254


>gi|85706141|ref|ZP_01037236.1| putative chemotaxis MotB protein [Roseovarius sp. 217]
 gi|85669305|gb|EAQ24171.1| putative chemotaxis MotB protein [Roseovarius sp. 217]
          Length = 287

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 70/333 (21%), Positives = 123/333 (36%), Gaps = 54/333 (16%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
             N   +IIK+K  +    ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K I  Y
Sbjct: 4   HSNAAPVIIKRKKIVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEQQRKGISDY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P       +  G          S    +               ++ ++N++   + + 
Sbjct: 64  FSPSVPINRISGGGDGAFGGDSVFSEDTLVQNGTG-------ASQRLATSNRQANGENVA 116

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                LS   Q E    +   D  +G                                  
Sbjct: 117 IEKGSLSAGAQVEAEAFAAIEDMLRGGSG------------------------------- 145

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                            LVAD  ++ ++   T   ++I I D     +F+    +  P  
Sbjct: 146 ---------------ESLVADETLRHIVTRLTDEELVIEIFDLPQAQLFEVDGVVATPLL 190

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +   +          +++ GHT A P        W LS  RA    Q+L   G+S  R
Sbjct: 191 KDLTALLASAANLVVNDVALAGHTRAQPITLARNPVWDLSSSRANQFRQMLEAEGLSAKR 250

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + +I+G A     +  DPM+  N R+++++   
Sbjct: 251 MRRITGHADRTSAVL-DPMDLRNNRLEMILLRS 282


>gi|119470009|ref|ZP_01612814.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
 gi|119446719|gb|EAW27992.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
          Length = 319

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 112/327 (34%), Gaps = 66/327 (20%)

Query: 16  IIKKK-VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           +++++         +   W + YAD+MT++ AFF+VM+ I    ++  + +         
Sbjct: 1   MMRRRFGRSAHKNQHTERWLVSYADYMTIMFAFFVVMYAIAINKEENFQILSDSLEQVFD 60

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                S  ++ +Q      +    D    E                        + + Y 
Sbjct: 61  K----SARVYSQQGTGVDGTGILTDRVTPE------------------------DELLYG 92

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            +  + E     L   SE      K                              K L  
Sbjct: 93  ESINKEEQGPELLDGQSETSNIQQKYLG---------------------------KPLDS 125

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L  K+ S L   + D        E  +  ++I +    +  +F   S++       V++ 
Sbjct: 126 LLTKLQSALIDEIRDGEAN---LELNQDWLIIEL---SSGMLFSSGSAVAHSRAKQVVKI 179

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + +++A     I +RG+TD    +N   R NW LS+ RA S    L   G++  R+  I 
Sbjct: 180 VKDIIAPVDNYIRVRGYTDDETIKNEIFRSNWELSVARATSILVELEALGINSARM-AIE 238

Query: 314 GFAHHRLKIASDP--MNSANRRIDILV 338
           G+  +     +D     + NR++ I +
Sbjct: 239 GYGQYSPFAPNDTDEGRAENRKVVIAL 265


>gi|260775707|ref|ZP_05884603.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608123|gb|EEX34292.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 294

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 105/327 (32%), Gaps = 63/327 (19%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
            +   P     W   +AD M++LM FF+++   +  D    K I                
Sbjct: 7   KVTCPPPGAPKWLSTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSME----------- 55

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
             F  Q+  +     K    I         +    +   +   +  + ++      ++  
Sbjct: 56  YAFGVQHQIKVVDIPKGTSVIATEFRPGRPEPTPLNFIMQHTSELTKPHLDLQPGEERQG 115

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             K                                          +  +  + LA  I +
Sbjct: 116 GGKGH-------------------------------------EEAESNEANKALAAIIQA 138

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                V + +   V  E     ++I I ++    MF + S+   P    +++++ +++  
Sbjct: 139 AFKREVDEGM---VDVEDLGQELVIRIREK---GMFPQGSAFLQPAFRPLIRQLADLIKD 192

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
               I I GHT +  F +   R +W LS  RA S    + K  G    R+  I G++ H+
Sbjct: 193 VPGQIRIAGHTSSMTFDSELYRSSWDLSALRAASVVLEMEKVPGFDSHRV-AIQGWSEHK 251

Query: 320 LK----IASDPMNSANRRIDILVEDRQ 342
                   +   +S  RR++I +   +
Sbjct: 252 PLSSEQYPNSVGSS--RRVEISLRQGE 276


>gi|126730120|ref|ZP_01745932.1| putative chemotaxis MotB protein [Sagittula stellata E-37]
 gi|126709500|gb|EBA08554.1| putative chemotaxis MotB protein [Sagittula stellata E-37]
          Length = 279

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 114/335 (34%), Gaps = 58/335 (17%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
                   IIIK+K  +    ++ G+WK+ YADF+T +MAFFL+MW++NAT +  +K I 
Sbjct: 2   SGDNELAPIIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGIA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YF P       +  G          +      +         +       T  +     
Sbjct: 62  DYFTPTIAMARVSGGGDGPLGGDSVFAENTLPRMGSGSTSLNPAASNGEQGTFTEGDTGD 121

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++                                        +     + +  +   
Sbjct: 122 DAADM----------------------------------------DEAFKEVEEMLMGRG 141

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                  +L + I                +   T  G++I   +  +  +F    + P P
Sbjct: 142 GESMVADELMEHI----------------VTRVTDEGLVIEFFESEHARLF-TGDATPTP 184

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
               +   +       T  ++I GH  +SP       +W +S  RA +  ++L   GV E
Sbjct: 185 LLEDLALVLARASEVVTNQMAIEGHVASSPLVLARDPSWDVSGLRASAFRELLTGEGVPE 244

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +R+ +++ +A       + PMN+ N RI+++    
Sbjct: 245 NRVKRVTSYADREPAHKN-PMNARNNRIEVVFLRD 278


>gi|220924426|ref|YP_002499728.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219949033|gb|ACL59425.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 277

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 110/327 (33%), Gaps = 62/327 (18%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK       +    W + +AD M +LM+FF+++   +  D    +A+          
Sbjct: 1   MARKKRGGAHGGHG---WFVTFADLMALLMSFFVMIAAYSTQDQKKLQAVAGSMRDAFGT 57

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +      E+N                                               
Sbjct: 58  NRESRFNGIIEKNGLP-------------------------------------------- 73

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            S         +T D    +      D        +N +            +  + L D+
Sbjct: 74  -SATRLRDPRDVTPDKASDRTTPPLPDEVFDNGVPQNGYRDGFGLAMASLRQALQDLPDI 132

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A+             + K VL   T  G+ +S++DQ N  MF   S+ P   T  VL+++
Sbjct: 133 AE-------------LSKNVLIHETERGLDVSLVDQDNRSMFPDGSTRPNDRTRQVLERL 179

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +   +  I++ G+T A+          W LS  RA S  ++L  +G+ +DR + +SG
Sbjct: 180 APTIRSLSNRIAVAGYTAATRPGRRPPAPPWELSTGRAISVREILAGAGIPDDRFAVVSG 239

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341
            A        +P  +ANRR+ I +   
Sbjct: 240 KADTEPLFPDNPYIAANRRVTITLLRD 266


>gi|332533102|ref|ZP_08408971.1| flagellar motor rotation protein MotB [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037384|gb|EGI73838.1| flagellar motor rotation protein MotB [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 319

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 110/324 (33%), Gaps = 65/324 (20%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++         +   W + YAD+MT++ AFF+V++ I    ++  + +            
Sbjct: 4   RRLRHSAAKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEEQFQILSDSLEQVF---- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                            ++    S        +  L    T +++        + Y  + 
Sbjct: 60  ----------------DKSARQYSQQGEGVNGNGILTDRVTPEQE--------VLYGESI 95

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            + E     L   S+      K                              K L  L  
Sbjct: 96  LKEEQGPELLDGQSDTSNIQQKYLG---------------------------KPLDSLLI 128

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           K+ S L   + D        E  +  ++I +    +  +F   SS+       V++ + +
Sbjct: 129 KLQSALIDEIRDGEA---SLELNQDWLIIEL---SSGMLFSSGSSVAHSRAKQVVKIVKD 182

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           ++A     + +RG+TD    RN   R NW LS+ RA S    L   G++  R+  I G+ 
Sbjct: 183 IIAPVDNYVRVRGYTDDESIRNEIFRSNWELSVARATSILVELEALGINSARM-AIEGYG 241

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
            +    ++D     + NR++ I +
Sbjct: 242 QYSPFASNDTEQGRAENRKVVIAL 265


>gi|254477135|ref|ZP_05090521.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214031378|gb|EEB72213.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 278

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 58/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFF++MW++NAT +  +K +  Y               F    P  
Sbjct: 27  AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY---------------FSPSIPLS 71

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
           R S         + +    +  + G+                        +  ++     
Sbjct: 72  RVSGGGNGAFNGDSMFTEQIKPQNGT-------------------GASDTNPMDAQQAQG 112

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           + G    +  +      +     L     E +++++                       +
Sbjct: 113 DTGVQDDQEREQTDETFRALAEELNGRGGESMVSLE-----------------------M 149

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + ++   T  G++I + D   +P+F + +  P      +++ +  V       I++ GH
Sbjct: 150 AQHIITRVTDEGLVIELFDTETSPLFKEGTPEPTLLFRDIIEMVARVTGVVENNIAVGGH 209

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           T + P        W LS  RA     +L   G    RI +++G A  +L  A+ PM + N
Sbjct: 210 TRSHPVVIANNPVWELSHARADMTRVMLESGGTKSKRIHRVTGHADRKLTDAN-PMAARN 268

Query: 332 RRIDILVEDR 341
            RI+I++  +
Sbjct: 269 NRIEIVLLRK 278


>gi|295132150|ref|YP_003582826.1| thrombospondin repeat-containing OmpA/MotB family outer
           hypothetical protein [Zunongwangia profunda SM-A87]
 gi|294980165|gb|ADF50630.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
           protein [Zunongwangia profunda SM-A87]
          Length = 470

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 95/310 (30%), Gaps = 28/310 (9%)

Query: 45  MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           +A F+         +   K     F P        S G+       +       D + + 
Sbjct: 170 LAIFV---------ESKYKH---AFEPEMGQHFQHSAGLKFMFGGTDTDGDGIYDKNDEC 217

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T    +      +     Q   ++    +   +   C ++        +D C  T   
Sbjct: 218 PETPGLPEFNGCPDSDGDGIQDSMDDCPNEAGLAEFNGCPDTDGDGVPDPEDDCPETPGL 277

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF------- 217
             +N   +     +   +    +     ++       T    V D               
Sbjct: 278 AELNGCPDADGDGIPDNEDECPEEAGPEENNGCPYEDTDGDGVIDPEDDCPEVAGTVANN 337

Query: 218 --ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274
                   ++  + +  NT +FD + +    E+   L  I E++         I GHTD+
Sbjct: 338 GCPEPTVEVINELNEYSNTVLFDFNKATIRSESEKALNSIIEIMEEYPNTVFHIGGHTDS 397

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N +LS +RA S  Q L+  G+  +R++   G+   R    +        NR
Sbjct: 398 V---GSDEYNLKLSKERAASVRQFLVDGGIPANRLTS-EGYGESRPIATNSTEAGRQENR 453

Query: 333 RIDILVEDRQ 342
           R++I ++  +
Sbjct: 454 RVEISLDKDK 463


>gi|300114849|ref|YP_003761424.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299540786|gb|ADJ29103.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
          Length = 280

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 92/303 (30%), Gaps = 71/303 (23%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           +      +W I  AD M++LM+FF+++   +  D    K +               K  F
Sbjct: 14  EERTGAPAWVITLADLMSLLMSFFVLLLSFSEMDVLKYKQVAGSM-----------KFAF 62

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             Q   +     K    I +  +         +  ++      +  + +     Q    +
Sbjct: 63  GVQREIKVKEPPKGTSIIAQEFSPGRPRPTPWNEIRQDTIDETKQTLDFSDAPIQDTEAE 122

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            +  +D                                            L  +I   L 
Sbjct: 123 VAELQD-------------------------------------------KLQHEIDEGL- 138

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                     +  ET +  I+I I ++     F   S+I   E    L KI  +L     
Sbjct: 139 ----------ITIETIKDRIIIRIQEK---GSFPSGSAIFSREFKPALDKIRAILKKIEG 185

Query: 265 VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322
            + + GHTD  P   +  R NW LS  RA S    L+    +S  R   + G+A  +   
Sbjct: 186 KLIVAGHTDDRPIQTSRFRSNWELSTARAVSVVHYLLATHEISPGRFV-LEGYADTQPLA 244

Query: 323 ASD 325
            ++
Sbjct: 245 PNE 247


>gi|90423959|ref|YP_532329.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90105973|gb|ABD88010.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 283

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 110/322 (34%), Gaps = 60/322 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   ++   ++G+W + +AD M +L  FF+++   +  D    + +           M  
Sbjct: 10  KKKPEEAGGHVGAWFVTFADLMGLLTGFFVMLVSFSHQDQYKLQIVAGSMREAFGVQM-- 67

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                            +    I++        +K        Q     +       ++ 
Sbjct: 68  ---------------DARYSGVIEKDGLPTRGKVKNVEHIAPDQATNRPSPDEGGGMAKL 112

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               K                           +      S     A++    + +++K  
Sbjct: 113 GTQLK--------------------------ADREFALASASLRQALQEMPEITEISKN- 145

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                          V+FE T  G+ + I+DQ   PMF   S +P   T+++++K+   L
Sbjct: 146 ---------------VMFEETPQGLNLQIVDQEGRPMFPDGSPLPYERTMLLVRKLAAPL 190

Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +   ISI GHT ++       D+ + LS  RA +  Q+L   G+    +  ++G A  
Sbjct: 191 RATALRISIVGHTSSTGAPGRDDDDAFVLSWQRANTVRQILKGEGLPSSHVFAVTGKADS 250

Query: 319 RLKIASDPMNSANRRIDILVED 340
                  P+ +ANRR+ I +  
Sbjct: 251 EPLFPDAPLLAANRRVTITLMR 272


>gi|218528676|ref|YP_002419492.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|218520979|gb|ACK81564.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
          Length = 462

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 16/279 (5%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T + G  D        ++            +           ++     +      L+++
Sbjct: 181 TDNPGALDSAASAPAEARLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASA 240

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ---- 193
           +       S        +    +   E      E   L          +   K L     
Sbjct: 241 EPMPLTVPSAEPAKPSAEAAPLAPPAEAKPAPPEPTLLAKAEAPPAKELAPAKELAAPAD 300

Query: 194 ------------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                        L  +I+  +  L        V    T  G+LISI D+ N  MF   S
Sbjct: 301 QAAKAAETAALSALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGS 360

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           + P P+ +  L++I ++L      + +RGHTD  PFR+   DNWRLS  RA  A  +L++
Sbjct: 361 AEPTPKVVKALERIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVR 420

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            G+ E RI +I G+A  + +IA++P  + NRRI+IL+  
Sbjct: 421 GGLDEARIDRIEGYADRQPRIANNPKAAENRRIEILLRG 459



 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 14/241 (5%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    III K+    +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +YF
Sbjct: 3   DRPHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           NP     +T  +   ++                D    +   D      ++ ++    ++
Sbjct: 63  NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDATGAPGSRARESALFQD 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN--------------YFL 175
               L+               ++          +       +                  
Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDPFDPLYWQVAALPRRRTD 182

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
            P + +   +   + RL   A+   S       ++         +       +      P
Sbjct: 183 NPGALDSAASAPAEARLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASAEP 242

Query: 236 M 236
           M
Sbjct: 243 M 243


>gi|295704127|ref|YP_003597202.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
 gi|294801786|gb|ADF38852.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
          Length = 277

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 62/328 (18%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +++    +  +   SW + Y+D +T+L+A F+V++ +++ D    K + + FN       
Sbjct: 3   RRRKRKHEEDHVDESWLLPYSDLLTLLLALFIVLFAMSSVDAQKFKNLSRAFNEAFV--- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
               G+ + Q+                                                 
Sbjct: 60  -GGTGVMEFQSL------------------------------------------------ 70

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+SE         + K        +   + +   +  L    KE+ +    ++ LQ +  
Sbjct: 71  QESEEAVQPSNTPAAKSTKKTNEVETAPNQSPASSQSLTSEQKEQTIREADQEELQQIQS 130

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI++ +      N+   +    T  G+LISI D     +FD   +    E   +   I E
Sbjct: 131 KINAYIQK---KNLTNQLQTSLTEEGLLISIRDN---VLFDSGRAQVRSEDTKIANDISE 184

Query: 258 VLA-HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L       I I GHTD  P RN     NW LS+ RA +  +V++K+      +    GF
Sbjct: 185 LLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMRAVNFMKVILKNDKLSPSMFSAKGF 244

Query: 316 AHHRLKIASDPMN--SANRRIDILVEDR 341
              +   +++     + NRR++IL+  R
Sbjct: 245 GEFKPVTSNNTAEGQAKNRRVEILITPR 272


>gi|218675467|ref|ZP_03525136.1| flagellar motor protein MotB [Rhizobium etli GR56]
          Length = 436

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 5/268 (1%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T + G    ++P +     K         T      +      +        ++  +  +
Sbjct: 170 TGADGGEAYRDPFDPDFWTKQVEVTTAGKTLPPGKSEQQPAENEATEVAKAEDMKPVPLA 229

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS----TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
              +  K++            K+     D +K+  +++        K    + ++KK   
Sbjct: 230 TDQKPAKDAKETKGAAETKEAKADGKVPDEKKAEAQKDADHQKDADKSAAASEQQKKEAD 289

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L  +I+  + G VA  + +G+       G+L+SI DQ +  MF+  S++P  E ++ ++
Sbjct: 290 ALQAQIAQQI-GGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAME 348

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +IG +L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RIS++S
Sbjct: 349 RIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVS 408

Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341
           GFA  RLK+ +DP N+ANRRI+ILV+  
Sbjct: 409 GFADRRLKLPADPFNAANRRIEILVQAD 436



 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 8/200 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFGKNLMTAS-----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
           TK A+  YFNP        +     K + D +   ++    + + +  E  +    D + 
Sbjct: 61  TKAAVATYFNPIKLADEKPTEKGLKKPVDDAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120

Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            ++  +    +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRL 192
            F P    +++      K L
Sbjct: 181 PFDPDFWTKQVEVTTAGKTL 200


>gi|319781670|ref|YP_004141146.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167558|gb|ADV11096.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 445

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 2/265 (0%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           G +     +  F  Q      ++     +  E       D    +   K +         
Sbjct: 178 GASYRDPFEPDFWSQQVAAPGAEASAQRTKIEGDPAKPGDKTAETQVLKVKAVPPVAAPL 237

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                  +     +             +         E    + P   EK       K  
Sbjct: 238 EPLAKDATSKQAANPATALAGETKPDGTKAAVAKAEPEAQKAVQPDIGEKAPTAAAVKAA 297

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D+ ++++        D +  GV  E T  G++ISI DQ +  MF+  S++P  E ++ +
Sbjct: 298 ADVKRQLADAFKPG--DKLHDGVSVEATDKGVVISITDQLDFGMFEVGSALPRRELVLAM 355

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +KIG ++      ISI GHTDA PFR+ + DNWRLS  RA+SAY +L++ GV E RI+++
Sbjct: 356 EKIGRIVNSQKGTISINGHTDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEV 415

Query: 313 SGFAHHRLKIASDPMNSANRRIDIL 337
           +GFA  + KIA+DP+ +ANRRI+IL
Sbjct: 416 AGFADRQPKIAADPLAAANRRIEIL 440



 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 12/204 (5%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
            + +Q   + II+++     D  ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A
Sbjct: 4   ANADQGRHEIIIVRRSHDDHDEAHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAA 63

Query: 65  IEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           +  YFNP    +  ++ KG+ D  + P        D          + +   G++ +K+ 
Sbjct: 64  VASYFNPVKLVDRNSSRKGLEDLGDGPRAMGLTADDPQEATSKAGQNGNAGAGASERKQD 123

Query: 124 YQRLE-----------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            Q  +           +    LS          ++++  + G                 +
Sbjct: 124 KQEPQQAEHSDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGVQAAGPATGASGGASYRD 183

Query: 173 YFLPPLSKEKILAMKRKKRLQDLA 196
            F P    +++ A   +   Q   
Sbjct: 184 PFEPDFWSQQVAAPGAEASAQRTK 207


>gi|15887914|ref|NP_353595.1| flagellar motor protein MotB [Agrobacterium tumefaciens str. C58]
 gi|15155508|gb|AAK86380.1| flagellar motor protein, PAL/OmpA family [Agrobacterium tumefaciens
           str. C58]
          Length = 433

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 1/266 (0%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T + G    ++P +     +          +   +    +  +++     E +    + +
Sbjct: 169 TGASGGEAYRDPFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVT 228

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                       D +  +             ++     P   +    +    ++   L +
Sbjct: 229 LVQAGKPADKAEDGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLRE 288

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           +I   +SG +   + +G++      G+L++I DQ  TPMF+  S++P  E ++ ++KIG+
Sbjct: 289 EIEKQISG-ITGKLSEGLVVTPAEGGLLLTISDQAETPMFNIGSAVPRGELVLAMEKIGK 347

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +L      + IRGHTD   F+  A DNWRLS+DRA+SAY +L++ G+SE+R+ ++SGFA 
Sbjct: 348 LLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQVSGFAD 407

Query: 318 HRLKIASDPMNSANRRIDILVEDRQG 343
            RL++ S+P+  ANRRI+IL+E  +G
Sbjct: 408 RRLQVPSNPLADANRRIEILLEADRG 433



 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 87/232 (37%), Gaps = 14/232 (6%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+     D  +  G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGKNEIIIVKRHKGGHDGAH-GGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112
           TK ++  YFNP   +    S    ++    E   Q K   +I            T   + 
Sbjct: 60  TKASVASYFNPIKLSDEKPSSKGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLT 119

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            + G  +   +    EN    L+   Q    + +++   E G                 +
Sbjct: 120 SQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRD 179

Query: 173 YFLPPLSKEK-----ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            F P    ++         +        A      ++   AD   + V    
Sbjct: 180 PFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQ 231


>gi|319653376|ref|ZP_08007476.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
 gi|317394860|gb|EFV75598.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
          Length = 265

 Score =  137 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 122/330 (36%), Gaps = 74/330 (22%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++K       +   SW + YAD +T+L+A F+V++ +++ D    + + + FN       
Sbjct: 3   RRKKKQHHEEHVDESWLLPYADLLTLLLALFIVLFAMSSVDAQKFQKLSKAFNDVF---- 58

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           +   G+F+  +P         D                         ++   ++  ++  
Sbjct: 59  SGGTGVFEFPSPMPEGQMQSTDAV----------------------SEKPSKDLEEMAAM 96

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            + E  K     D E                                       L +L +
Sbjct: 97  DELEKEKLKQAADQE--------------------------------------ELAELQQ 118

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++++ +      N+   +    T  G+L+SI D     +F   S+    + + +  +I E
Sbjct: 119 RVNAFIEN---QNLADKLETSLTTEGLLVSIRDN---VLFGSGSAEVREQDLNMASEIAE 172

Query: 258 VL-AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L       I I GHTD  P R +    NW LS+ RA +  ++++K+   + +     GF
Sbjct: 173 LLIMDPPRNIIISGHTDNVPIRNSSFESNWELSVMRAVNFMKIILKNDQLDPKWFSAKGF 232

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +    ++     + NRR++IL+  R G
Sbjct: 233 GEFQPVAGNNTKEGRAKNRRVEILILPRTG 262


>gi|288942520|ref|YP_003444760.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288897892|gb|ADC63728.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 279

 Score =  137 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 101/324 (31%), Gaps = 73/324 (22%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
             D P     W   +AD M+++M FF+++   +  D    K +               K 
Sbjct: 7   CPDPPAGAPEWMATFADLMSLMMCFFVLLLSFSEMDVIKYKQVAGSL-----------KA 55

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q              I +  +       + +  +++     +  +  L  + +   
Sbjct: 56  AFGVQRDIPAQEDPLGTSIIMQEFSPAQPQPTVINEVRQQTTDESKRFLEILDPAVEDAQ 115

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                                                           + +DL +++   
Sbjct: 116 -----------------------------------------------DKAEDLKQELKKE 128

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  +       +   T    ++I I ++     F  +S+         L KI E L   
Sbjct: 129 IAEGL-------IEINTIDDQVVIRIREK---GSFPSASARIDTPFKAALMKIAEALNQV 178

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
              I I GHTD  P        NW LS  RA +    + +  G++ +R+ +I     +R 
Sbjct: 179 EGRILIAGHTDDVPIETLEFPSNWVLSAARAAAVAHTMTQVGGIAPERV-EIRAHGDNRP 237

Query: 321 KIASDP--MNSANRRIDILVEDRQ 342
              ++     + NRR++I+V   +
Sbjct: 238 VDTNETTDGRANNRRVEIIVLGER 261


>gi|86749921|ref|YP_486417.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86572949|gb|ABD07506.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 274

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 70/321 (21%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               D  +    W + +AD M +L+AFF+V+   +  D    + +               
Sbjct: 12  KKKLDDEHTGHGWYVSFADLMGLLVAFFVVLVSYSTQDVKKLQIVAGSMR---------- 61

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                             D    +H  + S  ++   T  + +  + +N     +    S
Sbjct: 62  ------------------DAFGVQHQARYSGAVETDGTPVQGRVAKTDNAALDQAGGAGS 103

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                    S   +        S     A++    L +L+K   
Sbjct: 104 -------------------------SAQAKAEREFALASASLRQALQDVPELSELSK--- 135

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+FE T TG+ + + DQ   PMF   SS+P   T +++ K+   L 
Sbjct: 136 -------------NVVFEETPTGLNLELTDQDGRPMFADGSSVPYERTRLLIAKLAAPLR 182

Query: 261 HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            ++  ++I GHT A+    N   D++ LS  RA +  Q+L + G+S +R+  ++G     
Sbjct: 183 ATSLRVNIVGHTAATAVPANGDYDSFDLSTGRANAVRQILKREGLSSNRVMSVAGKGDGE 242

Query: 320 LKIASDPMNSANRRIDILVED 340
                 PM +ANRR+ I +  
Sbjct: 243 PLFPEAPMLAANRRVTISLLR 263


>gi|294498805|ref|YP_003562505.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
 gi|294348742|gb|ADE69071.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
          Length = 277

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 123/328 (37%), Gaps = 62/328 (18%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +++    +  +   SW + Y+D +T+L+A F+V++ +++ D    K + + FN       
Sbjct: 3   RRRKRKHEEDHVDESWLLPYSDLLTLLLALFIVLFAMSSVDAQKFKNLSRAFNEAFV--- 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
               G+ + Q+                                                 
Sbjct: 60  -GGTGVMEFQSL------------------------------------------------ 70

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+SE         + K  +     +   + +   +  L    KE+ +    ++ LQ +  
Sbjct: 71  QESEEAVQPSNTPAAKSTEKTNEVETAPNQSPASSQSLTSEQKEQTIREADQEELQQIQS 130

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI++ +      N+   +    T  G+LISI D     +FD   +    E   +   I E
Sbjct: 131 KINAYIKK---KNLTNQLQTSLTEEGLLISIRDN---VLFDSGRAQVRSEDTKIANDISE 184

Query: 258 VLA-HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L       I I GHTD  P RN     NW LS+ RA +  +V++K+      +    GF
Sbjct: 185 LLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMRAVNFMKVILKNDKLNPSMFSAKGF 244

Query: 316 AHHRLKIASDPMN--SANRRIDILVEDR 341
              +   +++     + NRR++IL+  R
Sbjct: 245 GEFKPVTSNNTAEGQAKNRRVEILITPR 272


>gi|114762178|ref|ZP_01441646.1| chemotaxis protein MotB [Pelagibaca bermudensis HTCC2601]
 gi|114545202|gb|EAU48205.1| chemotaxis protein MotB [Roseovarius sp. HTCC2601]
          Length = 277

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 113/333 (33%), Gaps = 59/333 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
             +   +IIK+K       ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K +  Y
Sbjct: 4   DSSVAPVIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F+P       +  G          S      +       + +        +   +     
Sbjct: 64  FSPTIAISRVSGGGDGSLGGDSIFSENTLPRVGTGATSLRPTSQHAARGASDPGEAD--- 120

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                 +  +  E  ++ L     +            +   +E   +   + E+      
Sbjct: 121 ---EIGAQDEALEAVEDLLMGRGGESMISDTLMRHIVTRVTDEGLVVELFATEEAPLFDA 177

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +    +L + +S  ++G+                                          
Sbjct: 178 QGAPTELLRALSGVIAGVSDM--------------------------------------- 198

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
                         T  ++I GH  A P       +W +S   A    ++L+  G+S+ R
Sbjct: 199 -------------VTNPLAIEGHVGAYPIVLARDPSWEVSTRHADRFRELLLADGLSKAR 245

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           I++++  A       ++PM+  N R++I+    
Sbjct: 246 INRVTAHADREP-AKNNPMDPRNTRLEIIFLRS 277


>gi|222147584|ref|YP_002548541.1| flagellar motor protein MotB [Agrobacterium vitis S4]
 gi|221734572|gb|ACM35535.1| flagellar motor protein [Agrobacterium vitis S4]
          Length = 444

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 5/257 (1%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
           +    +       +                   +Q+              +  Q      
Sbjct: 192 QTAQGKPGKAKPDEQQTVAEAAAKPDPFAQKPVDQQASAAAAAA----APDGAQGTPPSK 247

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           S      + +   +   +     + +   +    +       + ++   L ++I+S + G
Sbjct: 248 SQPEAKPQVEIDGQQVAIAVPKARPDPKQVAREEQNASADSDQTQQADQLKQQIASEI-G 306

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            VA  + +G++ +    G+LI++ DQ   PMFD  S++P  E ++ ++KIG++LA     
Sbjct: 307 GVAGKLAEGLIVQPAEGGLLITLTDQSQAPMFDVGSAVPRKEMVLAMEKIGKLLAERQGA 366

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + IRGHTDA  ++    DNW LS+ RA+SAY +L++ G++++RI+++SGFA  RL    D
Sbjct: 367 VVIRGHTDARQYKGPDNDNWGLSMSRAHSAYYMLVRGGLAQNRITQVSGFADRRLLKPED 426

Query: 326 PMNSANRRIDILVEDRQ 342
           P+ +ANRRI+ILV+  Q
Sbjct: 427 PLAAANRRIEILVQGDQ 443



 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 8/238 (3%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ I+IK+    D    + G+WKI YADFMT +MAFFLVMW++NA ++ 
Sbjct: 1   MSDAENHHHGKNEIIVIKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEK 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112
           T  ++  YFNP        ++    +        ++K    I            T   + 
Sbjct: 61  TTASVASYFNPIKLADEKPTEKGVKKPVDQAEGEESKERSKIKAEEETLGKAAATGEDMT 120

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G      +    EN    L+   Q    + +++   E G      +          +
Sbjct: 121 STSGDKPVYSEADLFENPYSVLAEIAQEVGQQANVSAKGEGGASESGPSTGASGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            F P    +++   + K       ++ +   +    D   +  + +        +  D
Sbjct: 181 PFDPDFWSQQMQTAQGKPGKAKPDEQQTVAEAAAKPDPFAQKPVDQQASAAAAAAAPD 238


>gi|320106352|ref|YP_004181942.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319924873|gb|ADV81948.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
          Length = 284

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 108/324 (33%), Gaps = 65/324 (20%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +      P+    W + YADF+T+L AFF+V++                           
Sbjct: 2   RGKKKHAPHGHERWLVSYADFITLLFAFFVVLFA-------------------------G 36

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S+G   +Q     + Q        +  +K            K     +   +   + +++
Sbjct: 37  SRGDAKKQQLLAVAIQTAFAQGAFDAHSKTPALAPSAGAMGKPTPIAMPTPMTPEAAARK 96

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                              ++ D ++  +      +P  ++       +    +     I
Sbjct: 97  -------------------EAADKKRIYDALAQMAVPQKNQNLPPLGAKPPSPEKRGTAI 137

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           S+             V F +   G+++S+ D      F+  S+    + I VL++I   L
Sbjct: 138 SA-------------VSFRSEPEGLVLSLQDA---GFFNSGSAALRADAIPVLERIAASL 181

Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + + GHTD           NW LS  RA +  +VL+   +       ++G+A  
Sbjct: 182 --PMGPLRVEGHTDNVAIHTALYASNWELSTARANAIARVLLARSLVNPASLAVAGYAEF 239

Query: 319 RLKIASDPM--NSANRRIDILVED 340
               ++      + NRR+DI++  
Sbjct: 240 HPISSNSTEEGRAKNRRVDIVLLK 263


>gi|304311123|ref|YP_003810721.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
 gi|301796856|emb|CBL45068.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
          Length = 359

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 111/327 (33%), Gaps = 60/327 (18%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  +++   N   W I YADF+T+L AFF+VM+ I++ +D   + +             
Sbjct: 2   RRRELEEETVNHERWVISYADFITLLFAFFVVMYSISSVNDGKYRVLSDSLVDAF----- 56

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                                    +  ++    + IG              +    +  
Sbjct: 57  -------------------------QSASRTINPVSIGEKVATSGNFETAVELPVPGDFP 91

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             E  K S+    +  +                                + ++   L+K 
Sbjct: 92  SKEDYKYSVEGLFDDVEPGAARQGDH-----------------------QDQQTSALSKL 128

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                S L  +     V        + +SI    +  +F  +S+    +   +L KI EV
Sbjct: 129 SEEMASRLQVEIQNADVKVVQRSEWLEVSI---PSNVLFASASANLSADAARLLGKISEV 185

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   + + G TD  P R      NW LS  RA +  ++ +  GV+  R++ I G+A 
Sbjct: 186 LKPADYSVQVEGFTDNVPIRTEQFPSNWELSAARAAAVVRLFVLGGVNPARLAAI-GYAD 244

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
            R    +        NRRI+I+V   +
Sbjct: 245 QRALGDNATAEGRALNRRINIIVSTSK 271


>gi|39935962|ref|NP_948238.1| chemotaxis protein MotB2 [Rhodopseudomonas palustris CGA009]
 gi|39649816|emb|CAE28338.1| possible chemotaxis protein MotB2 [Rhodopseudomonas palustris
           CGA009]
          Length = 326

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 104/322 (32%), Gaps = 59/322 (18%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD M +L++FF+++   +  D    + +               
Sbjct: 55  KKKAEEAHATHGWFVTFADLMGLLVSFFVMLVSFSTQDLRKMQIVAGSMRDAFGVQQN-- 112

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                          ++    I+         +K       +Q     +      +   +
Sbjct: 113 ---------------SRFAGVIETDGVPVQGKVKSKMNVAPEQASNTPHLEESGGSGSAA 157

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
            H K                                  S     A++    L +++K   
Sbjct: 158 SHAK--------------------------AEREFALASASLRQALQDVPELAEMSKN-- 189

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+FE T  G+ + + DQ   PMF   S++P   T  ++ ++   L 
Sbjct: 190 --------------VVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRKLVARLAAPLR 235

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            ++  + I GHT A+  +    D   LS++RA +  +VL + G+   ++  + G      
Sbjct: 236 ATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVLSLVGKGDGEP 295

Query: 321 KIASDPMNSANRRIDILVEDRQ 342
                P  +ANRR+ I +    
Sbjct: 296 LFPDAPALAANRRVTITLMREN 317


>gi|310816853|ref|YP_003964817.1| OmpA/MotB [Ketogulonicigenium vulgare Y25]
 gi|308755588|gb|ADO43517.1| OmpA/MotB [Ketogulonicigenium vulgare Y25]
          Length = 284

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 68/333 (20%), Positives = 119/333 (35%), Gaps = 68/333 (20%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q  +Q IIIK+K  +    ++ G+WK+ YADF+T +MAFFL+MWIIN+  ++ +  +  +
Sbjct: 16  QTGNQRIIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFLLMWIINSITEEQRDGLANF 75

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                          F    P    S     +          V   +GS           
Sbjct: 76  ---------------FATGTPVSTVSGGADGMFGGRDSQSQQVGPAVGSG---------- 110

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                                         +P            
Sbjct: 111 ---------------------------------------MDYITGRMPTARGASAAQSSD 131

Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              L+D+A+ +S  +   LV D I + ++   T  G++I +    + P+F    ++  P 
Sbjct: 132 ILALEDIARVLSGQSGESLVDDAIQRHIITRMTDEGLVIEVFSTPDAPVFQPGGTVLTPL 191

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           ++ ++Q I  V A     I++  H          +  W L+  RA +    L  +GV+  
Sbjct: 192 SLAIIQMIASVAAQVENGIAVAAHLPQQ--AGTDQGAWALTAARADTIRAALEGAGVAPV 249

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           R+ +++G A        DP    N R++I V  
Sbjct: 250 RLRRVTGHADRSPI-TLDPTVQRNDRVEITVLR 281


>gi|45442813|ref|NP_994352.1| hypothetical protein YP_3056 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809034|ref|YP_652950.1| hypothetical protein YPA_3043 [Yersinia pestis Antiqua]
 gi|150260228|ref|ZP_01916956.1| lateral flagellar proton motor protein B [Yersinia pestis
           CA88-4125]
 gi|162420691|ref|YP_001604823.1| hypothetical protein YpAngola_A0200 [Yersinia pestis Angola]
 gi|165924864|ref|ZP_02220696.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939072|ref|ZP_02227624.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008977|ref|ZP_02229875.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212177|ref|ZP_02238212.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398344|ref|ZP_02303868.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419079|ref|ZP_02310832.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167466315|ref|ZP_02331019.1| flagellar motor protein B [Yersinia pestis FV-1]
 gi|170022980|ref|YP_001719485.1| hypothetical protein YPK_0731 [Yersinia pseudotuberculosis YPIII]
 gi|218927933|ref|YP_002345808.1| hypothetical protein YPO0747 [Yersinia pestis CO92]
 gi|229837433|ref|ZP_04457596.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
 gi|229840644|ref|ZP_04460803.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842804|ref|ZP_04462956.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|294502809|ref|YP_003566871.1| flagellar motor protein [Yersinia pestis Z176003]
 gi|45437679|gb|AAS63229.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108780947|gb|ABG15005.1| putative chemotaxis membrane protein [Yersinia pestis Antiqua]
 gi|115346544|emb|CAL19421.1| putative chemotaxis membrane protein [Yersinia pestis CO92]
 gi|149289636|gb|EDM39713.1| lateral flagellar proton motor protein B [Yersinia pestis
           CA88-4125]
 gi|162353506|gb|ABX87454.1| flagellar motor protein B [Yersinia pestis Angola]
 gi|165913028|gb|EDR31653.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923064|gb|EDR40215.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992316|gb|EDR44617.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206923|gb|EDR51403.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963073|gb|EDR59094.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050848|gb|EDR62256.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|169749514|gb|ACA67032.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
 gi|229690071|gb|EEO82128.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697010|gb|EEO87057.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705556|gb|EEO91566.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
 gi|262360841|gb|ACY57562.1| flagellar motor protein [Yersinia pestis D106004]
 gi|262364786|gb|ACY61343.1| flagellar motor protein [Yersinia pestis D182038]
 gi|294353268|gb|ADE63609.1| flagellar motor protein [Yersinia pestis Z176003]
          Length = 303

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 118/336 (35%), Gaps = 63/336 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +       IIK+         + G+WK+ +ADF   +MA F+V+WI+    ++ ++ I 
Sbjct: 3   NHASGGATTIIKRANRKKHHVRHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              N        +   I  +         N ID       TK+++ +++           
Sbjct: 63  AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAIEVPEP-------- 114

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                         E    S     E  + + + T    + +  +   +P   +  I   
Sbjct: 115 ---------EQSLEEVVDKSRHEMEELSRIIMQITSAYNAQSNLQMEVVPQGLRILIQDD 165

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +++   Q  +  +                                  TP F +      P
Sbjct: 166 QQRDMFQRSSAVL----------------------------------TPFFSRLLGELAP 191

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305
                              I I GHTDAS +R+    +NW LS +RA  A++ L+  G+ 
Sbjct: 192 AF-----------NEMDNKIIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLD 240

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           E R+ +I+  A   L   +DP+ + NRRI+I+V  +
Sbjct: 241 EGRVLQINAMADQMLLDPTDPLAAKNRRIEIMVLTK 276


>gi|90422620|ref|YP_530990.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisB18]
 gi|90104634|gb|ABD86671.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 423

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 99/273 (36%), Gaps = 1/273 (0%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K+ M   +   D  +P          L       K + +L            +   
Sbjct: 149 EATRKDGMKGGEAYRDPFDPISWPMAQTSPLDDKALGRKEAGNLPFDEAAAALSEGQGRR 208

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                 ++  +              +              +      P ++         
Sbjct: 209 PSQGTPDATAAPQDAEPPKAAPASSEPQQDRPRPVGLFADDATKTGAPGNRPAGARGDTT 268

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                  K  ++  + L      + V     T  G+LIS+ D  N  MF   S+ P P  
Sbjct: 269 PAANAAGKLQATITAALATLGAARPVTEVRETTEGLLISLTDDVNYGMFATGSAAPSPGL 328

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +  L KI  ++A +   + +RGHTD   +R+   DNWRLS  RA+ AY +L++ G+   R
Sbjct: 329 VRALDKITPLIAQNRGQMIVRGHTDNRAYRSAEYDNWRLSTARAHMAYYMLIRGGLDAGR 388

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           I +I G+A  R K  +DP  + NRRI++L+   
Sbjct: 389 IERIEGYADRRPKDPNDPSAAPNRRIELLIRAP 421



 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
             Q+  + III+++ ++D    N G WKI YADFMT +MAFFLVMW+INAT+ +T++++ 
Sbjct: 2   AEQDRPELIIIRRRNSLDVEEKN-GVWKIAYADFMTAMMAFFLVMWLINATNPETRESVA 60

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKID---LSIDEHITKNSVDLKIGSTNQKKQ 123
            YFNP      T  +    +    +    ++ D      +          +    +   +
Sbjct: 61  AYFNPIKLTDSTPDRKGIHDPRRVDPGKADEGDNERPHPEPDNAAQPAPRQQPEQSHPDE 120

Query: 124 YQRLENNIFYLSNSQQSEH-CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                +    LS           + +      KD  K  +  +      ++ +   S   
Sbjct: 121 AALFRDPYAVLSEIAGGPPRAAQAGSAPEATRKDGMKGGEAYRDPFDPISWPMAQTSPLD 180

Query: 183 ILAMKRKKRLQDLAKKISSTLSG 205
             A+ RK+       + ++ LS 
Sbjct: 181 DKALGRKEAGNLPFDEAAAALSE 203


>gi|116250495|ref|YP_766333.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255143|emb|CAK06217.1| putative motility protein [Rhizobium leguminosarum bv. viciae 3841]
          Length = 443

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 20/302 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              I Q              G  D                 D       V++        
Sbjct: 142 LAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRDPFDPDFWTKQVEVTTAGKPLP 201

Query: 122 KQYQRLENNIFYLSNSQQSEHCKN--------------------SLTRDSEKGKDLCKST 161
                 +      +   + E  K                           +      +S 
Sbjct: 202 PGKSDEQAVESETTEIAKLEDAKPIPLTTDQKAAQETKETKETKGAVGAKDGKTPGGRSP 261

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           + +K+  +++        K      +++K+  +  +   +   G VA  + +G+    + 
Sbjct: 262 EDKKAEAQKDADHQKDADKSAAETEQQQKKEAEQLQAQIAQQIGGVAGKLAEGLTVTASE 321

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
            G+L+SI DQ +  MF+  S++P  E ++ ++KIG +L      ++IRGHTD   ++   
Sbjct: 322 GGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAIRGHTDGRQYKGTQ 381

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +NWRLS+DRA SAY +L++ G+ E RIS++SGFA  RLK+ SDP N+ NRRI+ILV+  
Sbjct: 382 NENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFNATNRRIEILVQAD 441

Query: 342 QG 343
           QG
Sbjct: 442 QG 443



 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 8/200 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGKNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------- 113
           TK ++  YFNP   +    ++    +        + +      E    +           
Sbjct: 61  TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEEDPNDGKAAADGDDQT 120

Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G      +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRL 192
            F P    +++      K L
Sbjct: 181 PFDPDFWTKQVEVTTAGKPL 200


>gi|222084880|ref|YP_002543409.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
 gi|221722328|gb|ACM25484.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
          Length = 452

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 2/281 (0%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           + + Q  N   K    A++          ++ ++  D        + S   K  +  Q  
Sbjct: 146 QQVGQQANVSAKGEGGAAQSGPATGADGGQAYRDPFDPDFWTKQVQVSSASKKANEEQAA 205

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +  +         +   +        +          S   +K    +E       SK+ 
Sbjct: 206 KSDQSAKGEVIALSKATAADSGEPTDKPQTPEDQPTLSDQRQKGQGADEKISSATQSKDI 265

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                +++  ++L + I + +SG VA  + +GV   +   G+L++I DQ N PMF+  S+
Sbjct: 266 APPKDQQQSAKELQQAIQAEISG-VAGQLAEGVQVASAEGGLLVTISDQSNDPMFNIGSA 324

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK 301
           +P  E ++ + KIG++LA+   VI IRGHTD  P+      DNWRLSLDRA SAY +L  
Sbjct: 325 VPRREMVLAMGKIGKILANRKGVILIRGHTDGRPYMVGGHNDNWRLSLDRAQSAYYMLTS 384

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +G+ E RI ++SGFA  RLK+ +DP N ANRRI+IL+ED +
Sbjct: 385 TGLDEKRIEQVSGFADRRLKLPNDPFNDANRRIEILIEDAK 425



 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN  GD+NQ   + II+K+  A +    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MND-GDQNQGKHEIIIVKRHGANEHEGGHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           TK ++  YFNP        ++    +        +N+     +E    N    K G    
Sbjct: 60  TKASVASYFNPIKLADEKPTEKGLKKPVDQADGKKNEAKSQNEETNPNNGKSAKTGEDQT 119

Query: 121 K--------KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
                     +    EN    L+   Q    + +++   E G                 +
Sbjct: 120 STSGDQTSYSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAAQSGPATGADGGQAYRD 179

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAK 197
            F P    +++      K+  +   
Sbjct: 180 PFDPDFWTKQVQVSSASKKANEEQA 204


>gi|241203119|ref|YP_002974215.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857009|gb|ACS54676.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 443

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/302 (25%), Positives = 120/302 (39%), Gaps = 20/302 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              I Q              G  D                 D       V++        
Sbjct: 142 LAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRDPFDPDFWTKQVEVTTAGKPLP 201

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                 +      +   + E  K       +K     K T   K   + ++   P     
Sbjct: 202 PGKSDDQAVESETTEIAKLEDAKPIPLTTDQKAAQETKETKETKGAVEAKDGKTPGGKSP 261

Query: 182 KILAMKRKKRLQDLAKKISSTLS--------------------GLVADNIVKGVLFETTR 221
           +    + +K          S                       G VA  + +G+    + 
Sbjct: 262 EDKKAEAQKDADHQKDADKSAAETEQQQQKEAEQLQAQIAQQIGGVAGKLAEGLTVTASE 321

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
            G+L+SI DQ +  MF+  S++P  E ++ ++KIG +L      +++RGHTD   ++   
Sbjct: 322 GGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAVRGHTDGRQYKGTQ 381

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +NWRLS+DRA SAY +L++ G+ E RIS++SGFA  RLK+ SDP N+ NRRI+ILV+  
Sbjct: 382 NENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFNATNRRIEILVQAD 441

Query: 342 QG 343
           QG
Sbjct: 442 QG 443



 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 8/200 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGKNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-----SVDLKI 115
           TK ++  YFNP   +    ++    +        + +      E    +       D + 
Sbjct: 61  TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEEDPNDGKAAADGDDQT 120

Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            ++  +    +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRL 192
            F P    +++      K L
Sbjct: 181 PFDPDFWTKQVEVTTAGKPL 200


>gi|146306332|ref|YP_001186797.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
 gi|145574533|gb|ABP84065.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 296

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 103/322 (31%), Gaps = 59/322 (18%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            ++    + +W + +AD M++LM FF+++   +  D    K I                 
Sbjct: 4   PEEEARAMPAWVMTFADLMSLLMCFFVLLLSFSEIDAQRFKQIAGEL-----------AK 52

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q              + +  +    +       +++                    
Sbjct: 53  AFGVQREVPALEVPLGTSPVFDKFSPGKPEPTEVQEIRQQTT------------------ 94

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                            + D +    + +         E  +  + +  +  L + +   
Sbjct: 95  -----------------TQDPQLDTLRGDAEAELQARAEAQVDQQVRDSVAALQQLLQGE 137

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           LS      + +              I+       F   S+   P    +L  + E+L   
Sbjct: 138 LSEGRLQLLEERRRI----------ILRVEERGSFASGSAELTPAFEDMLLGMSELLVEI 187

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              +++ GHTD  P      R NW LS  RA +    L+ +   E +  ++ GFA  R +
Sbjct: 188 PGTLTVEGHTDDVPISTARFRSNWDLSAARASAVANALLLNPALEPQRLEVKGFADTRPR 247

Query: 322 IASDPM--NSANRRIDILVEDR 341
           +A+D     + NRR++I+++  
Sbjct: 248 VANDSAQQRALNRRVEIIIDQS 269


>gi|99082778|ref|YP_614932.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99039058|gb|ABF65670.1| Chemotaxis motB protein (Motility protein B) [Ruegeria sp. TM1040]
          Length = 279

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 119/310 (38%), Gaps = 57/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MW++NAT +  +K +  YF+P       +            
Sbjct: 27  AWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADYFSPSIPLSRVSG----------- 75

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                                   G+   +      E+           E+  ++     
Sbjct: 76  -----------------------GGNGAFQGDTMFTEDVKPQNGVGATKENPTDASRAQG 112

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           E G    + +D                           +++++    +      +V+ ++
Sbjct: 113 ETGVADDQQSD--------------------AAEEASFRQIEEAL--MGRGGESMVSIDM 150

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + ++   T  G++I + +  +  +F+  S  P      +L+ +  V +     ++I GH
Sbjct: 151 ARHIVTRVTDEGLIIELFETEDATLFEADSERPTVLMRDLLRMVARVTSGVENNVAIGGH 210

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
             ++P        W LS  RA    ++L   G+S  RIS+++GFA      + +PM+  N
Sbjct: 211 VASTPVVIANNPVWALSHARADQTRELLQAGGMSAKRISRVTGFADRD-LASQNPMSERN 269

Query: 332 RRIDILVEDR 341
            RI I +  +
Sbjct: 270 NRITITLLRK 279


>gi|192291615|ref|YP_001992220.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192285364|gb|ACF01745.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 285

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 104/322 (32%), Gaps = 59/322 (18%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD M +L++FF+++   +  D    + +               
Sbjct: 14  KKKAEEAHATHGWFVTFADLMGLLVSFFVMLVSFSTQDLRKMQIVAGSMRDAFGVQQN-- 71

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                          ++    I+         +K       +Q     +      +   +
Sbjct: 72  ---------------SRFAGVIETDGVPVQGKVKSKMNVAPEQASNTPHLEESGGSGSAA 116

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
            H K                                  S     A++    L +++K   
Sbjct: 117 SHAK--------------------------AEREFALASASLRQALQDVPELAEMSKN-- 148

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+FE T  G+ + + DQ   PMF   S++P   T  ++ ++   L 
Sbjct: 149 --------------VVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRKLVARLAAPLR 194

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            ++  + I GHT A+  +    D   LS++RA +  +VL + G+   ++  + G      
Sbjct: 195 ATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVLSLVGKGDGEP 254

Query: 321 KIASDPMNSANRRIDILVEDRQ 342
                P  +ANRR+ I +    
Sbjct: 255 LFPDAPALAANRRVTITLMREN 276


>gi|86750474|ref|YP_486970.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86573502|gb|ABD08059.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 273

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 99/322 (30%), Gaps = 64/322 (19%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGKNLMTA 79
               +  +    W + +AD M +L+AFF+++   +  D D  K +       FG      
Sbjct: 3   KKKREEAHGGHGWFVTFADLMALLLAFFVMLTAFSTQDKDKLKVVAGSMREAFGVQSDAR 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             GI +    P R      +    E  T      ++                        
Sbjct: 63  YSGIIENDGLPTRGKVKNTEHVNPELSTAKPSPGEVSKDEG------------------- 103

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                      I+ +E       S     A++    + +L+K +
Sbjct: 104 ---------------------------IHTKEEREFALASASLRQALQDMPEISELSKNV 136

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                    +   +G+  E           D    P            T  +LQ +   L
Sbjct: 137 M-------FEETKQGLNLEIMDQDGRAMFADGSKAPF---------ERTRRLLQSLAGPL 180

Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +   I+I GHT A      +  N + LS DRA +  Q+L + GV       ++G +  
Sbjct: 181 RATPLRITIAGHTSAGLMPARSDYNGFDLSADRANAVRQILEREGVPTSHFFAVTGRSDT 240

Query: 319 RLKIASDPMNSANRRIDILVED 340
           +     DP  +ANRR+ I +  
Sbjct: 241 QPLFPEDPAIAANRRVTITLMR 262


>gi|186896751|ref|YP_001873863.1| hypothetical protein YPTS_3453 [Yersinia pseudotuberculosis PB1/+]
 gi|186699777|gb|ACC90406.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 303

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 119/336 (35%), Gaps = 63/336 (18%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +       IIK+         + G+WK+ +ADF   +MA F+V+WI+    ++ ++ I 
Sbjct: 3   NHASGGATTIIKRANRKKHHVRHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              N        +   I  +         N ID +     TK+++ +++           
Sbjct: 63  AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGNEQAKETKSNLAIEVPEP-------- 114

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                         E    S     E  + + + T    + +  +   +P   +  I   
Sbjct: 115 ---------EKSLEEVVDKSRHEMEELSRIIMQITSAYNAQSNLQMEVVPQGLRILIQDD 165

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +++   Q  +  +                                  TP F +      P
Sbjct: 166 QQRDMFQRSSAVL----------------------------------TPFFSRLLGELAP 191

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305
                              I I GHTDAS +R+    +NW LS +RA  A++ L+  G+ 
Sbjct: 192 AF-----------NEMDNKIIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLD 240

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           E R+ +I+  A   L   +DP+ + NRRI+I+V  +
Sbjct: 241 EGRVLQINTMADQMLLDPTDPLAAKNRRIEIMVLTK 276


>gi|327193053|gb|EGE59965.1| chemotaxis motility protein [Rhizobium etli CNPAF512]
          Length = 440

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 4/267 (1%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             +   D  +P   + Q ++  +        S +        +         +   ++ +
Sbjct: 174 GGEAYRDPFDPDFWTKQVEVTTAGKTLPPGKSEEQATEGAATEVAKAEDTKPVPLATDQK 233

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL----PPLSKEKILAMKRKKRLQD 194
            ++  K S            K+TD +    K+            +       +R+K+  D
Sbjct: 234 PAKDAKESKETKGAPETKGGKATDGKAPDEKKAEAEKNADHQKDADNSAAETERQKKEAD 293

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
             ++  +   G VA  + +G+    +  G+L+SI DQ +  MF+  S++P  E ++ +++
Sbjct: 294 ELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMER 353

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           IG +L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RIS++SG
Sbjct: 354 IGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSG 413

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341
           FA  RLK+ +DP N+ANRRI+ILV+  
Sbjct: 414 FADRRLKLPADPFNAANRRIEILVQAD 440



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 8/200 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113
           TK A+  YFNP    +     KG+    +  E   + +     +++ T+           
Sbjct: 61  TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120

Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G      +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRL 192
            F P    +++      K L
Sbjct: 181 PFDPDFWTKQVEVTTAGKTL 200


>gi|299133623|ref|ZP_07026817.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
 gi|298591459|gb|EFI51660.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
          Length = 275

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 105/322 (32%), Gaps = 61/322 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +       W + +AD M ++M+FF+++   +                      T 
Sbjct: 3   KKKRGEAHAGGHGWFVTFADLMGLMMSFFVMLVAFS------------------NQDQTK 44

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K +          +  +    I+         LK       ++     +          
Sbjct: 45  LKIVAGSMREAFGVANARYSGVIETDGLPTRPKLKNVDHIPPEEASNTPSPDE------- 97

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                              K          + +      S     A++    + +L+K I
Sbjct: 98  -------------------KEQAKLYGARIKTDREFALASASLRQALQDMPEMTELSKHI 138

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                            FE T+ G+ + I+DQ    MF + S  P   T ++++K+   L
Sbjct: 139 M----------------FEETKQGLNLEIVDQDGRSMFAEGSREPYERTRMLIRKLAAPL 182

Query: 260 AHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             S   ++I GHT +         D + LS DRA +  Q+L ++G+    I  +SG A  
Sbjct: 183 RQSPLRVAIVGHTSSDFTSPRPGYDAFDLSADRANAVRQILERAGLPSTHIFSVSGKADS 242

Query: 319 RLKIASDPMNSANRRIDILVED 340
                 DP  +ANRR+ I +  
Sbjct: 243 EPLFPDDPSLAANRRVTITLMR 264


>gi|328542461|ref|YP_004302570.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
 gi|326412208|gb|ADZ69271.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 110/320 (34%), Gaps = 51/320 (15%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                 +    W + +AD M++L+ FF+++   +  D +  + +                
Sbjct: 3   KKKQQSSGAPEWLVTFADLMSLLVCFFVLIISFSIQDREKMQVVAGSMR----------- 51

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
                            D    +  ++ +  ++I     +   + +      L +   +E
Sbjct: 52  -----------------DAFGVKESSRRTGIIEIEGIPIRDYMKHVTQVPQELDSDFAAE 94

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             +    +  E         D+EKS            +     A +    + +++  I  
Sbjct: 95  RHEKKSKQGPEANTHDTVEADIEKSRQ------FATAAASLRQAFQEMPEITEISSNI-- 146

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                         + E T  G+ I I+DQ    MF + S  P   T  +L K+  VLA 
Sbjct: 147 --------------IMEETEEGLNILIVDQDGRSMFREGSKYPYETTRRLLAKMAPVLAE 192

Query: 262 STEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               I I GHT             W LS DRA  A  +L + G+  D+I  + G A    
Sbjct: 193 MPNRIQITGHTTTGGTTADPSYTGWELSSDRANIARMILTEYGIPADQIHSVVGKADSEP 252

Query: 321 KIASDPMNSANRRIDILVED 340
              +DP  +ANRRI IL+  
Sbjct: 253 LFPNDPFLAANRRIGILLMS 272


>gi|206889281|ref|YP_002248656.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741219|gb|ACI20276.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 213

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D  K I   L  L+ D     +  ++   GI+I++ D     +F   S+   PE+   L
Sbjct: 69  EDRNKAIIEDLRKLLNDISG--INIKSDARGIVITLPDSL---LFSSGSAELKPESTDAL 123

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +I E L      ++I GHTD  P  +   + NW LS  RA S    L++ G+S DR   
Sbjct: 124 TRIAEKLKELPGKVAIEGHTDNIPISSSVYKSNWELSAARASSVLHFLLQRGLSPDRFL- 182

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVED 340
           I+G+  ++    +D     + NRR+++++  
Sbjct: 183 IAGYGEYKPVATNDTDEGRAKNRRVELIILR 213



 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          +K   ++   N+  W I Y+DF+T+L  FF+ ++ +++ D    + +        K +  
Sbjct: 4  RKRNNNNEEENVHRWLISYSDFLTLLFTFFVALYALSSVDVTKAEKMTSSLRKVFKVIDE 63

Query: 79 ASKGIFDEQNPP 90
                D     
Sbjct: 64 PVSFEEDRNKAI 75


>gi|325291956|ref|YP_004277820.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
 gi|27763656|gb|AAO20254.1| MotB [Agrobacterium sp. H13-3]
 gi|325059809|gb|ADY63500.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
          Length = 428

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 8/289 (2%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              I Q              G  D       S         D       V +      Q 
Sbjct: 141 LAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRDPFDPDFWTQQVKITRADQQQN 200

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-- 179
              Q+          ++ +E      ++    G D  K+ ++   + ++        +  
Sbjct: 201 PVEQQQSAENKQQDPAKDNEAVAAKSSQQPVDGADHGKAMEIAAVVPQQRPGAAEQAALT 260

Query: 180 -----KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                +++     +K+  ++L ++I   +SG ++  + +G++      G+L++I DQ  T
Sbjct: 261 QPQPEQQQQGTAAQKEEAKELREEIEKQISG-ISGKLAEGLVVTPAEGGLLLTISDQTET 319

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           PMF+  S++P  E ++ ++KIG++L      + IRGHTD   F+  A DNWRLS+DRA+S
Sbjct: 320 PMFNVGSAVPRGEMVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHS 379

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           AY +L++ G+SE+R+ ++SGFA  RL++ +DP+ +ANRRI+IL+E  +G
Sbjct: 380 AYYMLVRGGLSEERVKQVSGFADRRLQVPADPLANANRRIEILLEADRG 428



 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 9/232 (3%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+     D  +  G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGKNEIIIVKRHKGGHDGAH-GGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112
           TK ++  YFNP   +    S    ++    E   + K   +I            T   + 
Sbjct: 60  TKASVASYFNPIKLSDEKPSSKGLEKPVDKEEGVEKKDQSNIKAEKVTQGSAAATGEDLT 119

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            + G  +   +    EN    L+   Q    + +++   E G                 +
Sbjct: 120 SQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRD 179

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            F P    +++   +  ++   + ++ S+           + V  ++++  +
Sbjct: 180 PFDPDFWTQQVKITRADQQQNPVEQQQSAENKQQDPAKDNEAVAAKSSQQPV 231


>gi|218133672|ref|ZP_03462476.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991047|gb|EEC57053.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
           43243]
          Length = 266

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 102/324 (31%), Gaps = 70/324 (21%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K+   +      +W   ++D M +L+ FF++++ ++              +P  +     
Sbjct: 3   KIKKREEKGGGAAWMNTFSDLMNLLLCFFVMLFAMS--------------DPNQEKFQQL 48

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  +    +     S +  D  +         +L                          
Sbjct: 49  SASLASTFSIFNAGSISMGDGVLIGSGASQLNEL-------------------------- 82

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                     ++       +     +      ++  LQ+     
Sbjct: 83  ---------------------AIYYNNMGMNSEGEITQEEIKDAAQQIQEAGLQESEHMA 121

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L  + +   V  + T   +++++    +  +FD   S    E + +L K+  +L
Sbjct: 122 ENIEKQLEQNMLSDDVEVKATSKYVMLNLN---SGILFDSGKSELKTEAVTLLDKVSSIL 178

Query: 260 AHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
                 +I+I GHTD +P  N    DN  LSL RAYS +  L    G     +   +G  
Sbjct: 179 WEYNDNMIAIEGHTDNNPIHNSKYPDNTMLSLYRAYSVFTYLTDQKGFDASTMLA-TGRG 237

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 238 ESVPIASNATAEGRAQNRRVEIKI 261


>gi|190890377|ref|YP_001976919.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
 gi|190695656|gb|ACE89741.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
          Length = 440

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             +   D  +P   + Q ++  +        S +        +         +   ++ +
Sbjct: 174 GGEAYRDPFDPDFWTKQVEVTTAGKALPPGKSAEQATEGAATEVAKAEDMKPVPLATDQK 233

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL----EKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++  K S            K+TD     EK +  E+N      + +     +R+K   D
Sbjct: 234 PAKDAKESKETKGAPETKGGKTTDGKAPDEKKVEAEKNADHQKDADKSADETERQKTEAD 293

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
             ++  +   G VA  + +G+    +  G+L+SI DQ +  MF+  S++P  E ++ +++
Sbjct: 294 ELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMER 353

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           IG +L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RIS++SG
Sbjct: 354 IGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSG 413

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341
           FA  RLK+ +DP N+ANRRI+ILV+  
Sbjct: 414 FADRRLKLPADPFNAANRRIEILVQAD 440



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 8/200 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113
           TK A+  YFNP    +     KG+    +  E   + +     +++ T+           
Sbjct: 61  TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120

Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G      +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRL 192
            F P    +++      K L
Sbjct: 181 PFDPDFWTKQVEVTTAGKAL 200


>gi|163758026|ref|ZP_02165114.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
 gi|162284315|gb|EDQ34598.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
          Length = 411

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 6/291 (2%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----QNKIDLSIDEHITKN 109
           +   +    +   YF      L   ++    + N  ++             +      ++
Sbjct: 119 STAGEKQDYSEADYFENPYSVLAEIAQETGTQTNVSDKGDGGAAQSGPATGASGGEAYRD 178

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
             D    S + +K    LE +         + +       D E  +D   +      ++ 
Sbjct: 179 PFDPDFWSKSVEKDSDTLEESQSMFEVETFANNRLPESPVDKEPLQDPTDADGPAGDLSA 238

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +        +      +++      L + I   L G +   + +G++ E    G+L+SI 
Sbjct: 239 QMAGDGGTGALTPEQLLEQLAEADVLKEDIMKALGGAL-GKLAEGLVVEPAEGGLLVSIT 297

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           DQ +  MF+  S++P  + ++ ++KIGEVLA     I+IRGHTDA PF +   DNWRLSL
Sbjct: 298 DQLDFGMFNVGSAVPGRDLVIAMEKIGEVLAERDGAIAIRGHTDARPFASDTDDNWRLSL 357

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            RA+SAY +L++ G+SE+RIS++SGFA  RLK   +P++  NRRI+ILVE 
Sbjct: 358 ARAHSAYYMLVRGGLSEERISQVSGFADRRLKDPDNPLSEVNRRIEILVEA 408



 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 8/210 (3%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           +Q  ++ II+K++    D  ++ G WKI YADFMT +MAFFLVMW++NA++++TK AI  
Sbjct: 6   HQGKNEIIIVKRRGGGGDDGHHGGVWKIAYADFMTAMMAFFLVMWLVNASNEETKAAIAS 65

Query: 68  YFNPFGKNLMTA--------SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
           YFNP                 K    E   P+  ++     +       +  +   G   
Sbjct: 66  YFNPIKLMDDKPADKGIKQVGKSAEGEATAPKSKTEGDESTTGQAGEAGSQKNSTAGEKQ 125

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
              +    EN    L+   Q    + +++   + G                 + F P   
Sbjct: 126 DYSEADYFENPYSVLAEIAQETGTQTNVSDKGDGGAAQSGPATGASGGEAYRDPFDPDFW 185

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            + +              ++ +  +  + +
Sbjct: 186 SKSVEKDSDTLEESQSMFEVETFANNRLPE 215


>gi|86356325|ref|YP_468217.1| flagellar motor protein MotB [Rhizobium etli CFN 42]
 gi|86280427|gb|ABC89490.1| chemotaxis motility protein [Rhizobium etli CFN 42]
          Length = 436

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 130/262 (49%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             +   D  +P   + Q ++  +      K+        T +  + + ++          
Sbjct: 174 GGQAYRDPFDPDFWTKQVEVTTAGKPLPGKSEGQAAESETTEIAKAEDMKPVPLATDQKP 233

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             E  +     +++ GK        EK+    ++      +       +++K+  +  + 
Sbjct: 234 AKEVKETMGVAEAKDGKVTDGKAPEEKTAEARKDAEHQKEADRDAAGAEQQKKEAEQLQA 293

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
             +   G VA  + +G+       G+L+SI DQ +  MF+  S++P  E ++ ++KIG +
Sbjct: 294 QIAQQIGGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMEKIGTI 353

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G++E R+S++SGFA  
Sbjct: 354 LKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLNETRVSQVSGFADR 413

Query: 319 RLKIASDPMNSANRRIDILVED 340
           RLK+ +DP N+ANRRI+ILV+ 
Sbjct: 414 RLKLPADPFNAANRRIEILVQA 435



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 8/226 (3%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSDGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113
           TK A+  YFNP    +     KG+    +  E   + +     +++ T+           
Sbjct: 61  TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120

Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G      +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGQAYRD 180

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
            F P    +++      K L   ++  ++                 
Sbjct: 181 PFDPDFWTKQVEVTTAGKPLPGKSEGQAAESETTEIAKAEDMKPVP 226


>gi|254706492|ref|ZP_05168320.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
          Length = 284

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 4/236 (1%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            +L   +   + Q  + +       ++  ++  +      S          DL     + 
Sbjct: 49  AELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQT 108

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILI 226
                P    +   A  +++ + DL K  +   +              V       G++I
Sbjct: 109 VPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMI 168

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF++   DN R
Sbjct: 169 QLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNRR 228

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           LS  RA  AY +L++ G+ E R+ ++ G+A    K  +DP  + NRRIDI ++ + 
Sbjct: 229 LSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFIKSKP 284


>gi|13472587|ref|NP_104154.1| flagellar motor protein MotB [Mesorhizobium loti MAFF303099]
 gi|14023333|dbj|BAB49940.1| flagellar motor protein; MotB [Mesorhizobium loti MAFF303099]
          Length = 471

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 13/283 (4%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
             Y +PF  +  +        +   +R       L   +   ++ V              
Sbjct: 186 ASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPAPPVKD 245

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS------ 179
                +        +   K   T+ S       K+ D +   +K         +      
Sbjct: 246 APLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAAAAQET 305

Query: 180 -----KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                 EK       K   D+ ++++        D +  GV  E T  G++ISI DQ + 
Sbjct: 306 AAPEAGEKPPTAAAVKAAADVKQQLADAFKPG--DKLHDGVSVEATDKGVVISITDQLDF 363

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            MF+  S++P  E ++ ++KIG ++      ISI GHTDA PFR+ + DNWRLS  RA+S
Sbjct: 364 GMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGHTDARPFRSASYDNWRLSTARAHS 423

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           AY +L++ GV E RI++++GFA  + K  +DP+++ANRRI+IL
Sbjct: 424 AYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEIL 466



 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 9/197 (4%)

Query: 6   DKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAI 65
           D +    + II+++     D  ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A+
Sbjct: 15  DADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAAV 74

Query: 66  EQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
             YFNP    +  ++ KG+ D  + P             +     +     GS++ KK  
Sbjct: 75  ASYFNPVKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQAGSGDAGSSDAKKDK 134

Query: 125 QRLE--------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           Q+ +        +    LS          ++++  + G                 + F P
Sbjct: 135 QQPQQTDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPATGASGGASYRDPFEP 194

Query: 177 PLSKEKILAMKRKKRLQ 193
               +++ A   +   Q
Sbjct: 195 DFWSQQVAAPAAEASAQ 211


>gi|209547941|ref|YP_002279858.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533697|gb|ACI53632.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 447

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 6/277 (2%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            Y +PF  +  T    +            ++              D+K       ++  +
Sbjct: 177 AYRDPFDPDFWTKQVEVTTAGKSAPPGKSDEQAAESATTEIAKVEDMKPIPLTTDQKAAQ 236

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                   ++ +  +  K+   +  +K     K    + + ++++       ++++    
Sbjct: 237 EAKGAAEATDGKAPDDKKSGDKKAEDKKAPAQKDAAQKDADHQKDADKSAAETEQQQQKE 296

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             + + Q   +       G +A  + +G+    +  G+L+SI DQ +  MFD  S++P  
Sbjct: 297 AEQLQAQIAQRI------GGIAGKLAEGLTVTASEGGLLVSISDQSDDSMFDIGSAVPRQ 350

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E ++ ++KIG +L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E
Sbjct: 351 EMVLAMEKIGAILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDE 410

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
            RIS++SGFA  RLK+ SDP N+ NRRI+ILV+  +G
Sbjct: 411 KRISQVSGFADRRLKLPSDPFNATNRRIEILVQADRG 447



 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 8/192 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+   + +   ++ II+K+    D   ++ G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1   MSEGENHHHGKNEIIIVKRHGGGDHDGSHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT-----KNSVDLKI 115
           TK ++  YFNP   +    ++    +        + +      E            D + 
Sbjct: 61  TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEENPNDGKASADGDDQT 120

Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            ++  +    +    EN    L+   Q    + +++   + G                 +
Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAQDSGPATGADGGEAYRD 180

Query: 173 YFLPPLSKEKIL 184
            F P    +++ 
Sbjct: 181 PFDPDFWTKQVE 192


>gi|261313945|ref|ZP_05953142.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
 gi|261302971|gb|EEY06468.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
          Length = 283

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 4/236 (1%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            +L   +   + Q  + +       ++  ++  +      S          DL     + 
Sbjct: 48  AELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQT 107

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILI 226
                P    +   A  +++ + DL K  +   +              V       G++I
Sbjct: 108 VPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMI 167

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            + D+ +  MF   S+ P    + +L++I +V+A     + I GHTDA PF++   DN R
Sbjct: 168 QLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNRR 227

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           LS  RA  AY +L++ G+ E R+ ++ G+A    K  +DP  + NRRIDI ++ + 
Sbjct: 228 LSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFIKSKP 283


>gi|56695114|ref|YP_165461.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3]
 gi|56676851|gb|AAV93517.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3]
          Length = 285

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 116/310 (37%), Gaps = 58/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFF++MW++NAT +  +K +  YF+                  P  
Sbjct: 34  AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSD---------------SIPIN 78

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
             S         + +   +  +  G+    ++    + +       +Q            
Sbjct: 79  PVSGGGDGSFGGDSMFSENAMVTTGTGGVNRRRADADRSRGSTGVDRQGGEG-------- 130

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                                    PL + K L    + R  +           LV++ +
Sbjct: 131 ------------------------EPLEEFKTLEAALQGRGGE----------SLVSEQL 156

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            K ++   T  G+++ +I    +P+F+ +S  P      + + +       +  I++ GH
Sbjct: 157 RKHIVTRVTDEGLIVELISTDESPLFETNSDRPTQLMKELAKVVVRAADMVSNGIAVGGH 216

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
             A P        W LS  RA     +    G+ E+RI +++G A  +L   + PM + N
Sbjct: 217 IRAHPVVLARNPVWELSTARAERTRVLFEGLGMKEERIQRVTGHADRKLTDPN-PMAARN 275

Query: 332 RRIDILVEDR 341
            RI+I+    
Sbjct: 276 DRIEIIFLRS 285


>gi|315127296|ref|YP_004069299.1| chemotaxis protein [Pseudoalteromonas sp. SM9913]
 gi|315015810|gb|ADT69148.1| putative chemotaxis protein [Pseudoalteromonas sp. SM9913]
          Length = 320

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 66/327 (20%)

Query: 16  IIKKKVAIDD-TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           ++++++        +   W + YAD+MT++ AFF+V++ I    +D  K +         
Sbjct: 1   MLRRRLRHHQLKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEDNIKVLSDSLEHVFD 60

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                           ++ +    D  + E +T  +  L   S  + +Q   L +     
Sbjct: 61  KSAKQYS---------QQGNGVNGDALLLERVTPEAEILYGESIQELEQGPMLLDGQSDN 111

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           SN  Q    K                                               L  
Sbjct: 112 SNISQRHLGKP----------------------------------------------LDS 125

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L  K+ S+L   +          E ++  ++I +    +  +F   S++   +   +++K
Sbjct: 126 LLAKLQSSLIDEIRSGEA---SLELSQDWLVIELN---SGLLFASGSAVAHNKAKEIVKK 179

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I  ++A     I +RG+TD    RN   R NW LS+ RA S    L + G+   R+  I 
Sbjct: 180 IEAIIASVDNYIRVRGYTDNETIRNEIFRSNWELSVARATSILVELERLGIESARM-AIE 238

Query: 314 GFAHHRLKIASDPM--NSANRRIDILV 338
           G+  +     ++     + NR++ I +
Sbjct: 239 GYGQYSPFADNNTEAGRAENRKVVIAL 265


>gi|149375537|ref|ZP_01893307.1| flagellar motor protein MotB [Marinobacter algicola DG893]
 gi|149360242|gb|EDM48696.1| flagellar motor protein MotB [Marinobacter algicola DG893]
          Length = 305

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 65/321 (20%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            ++    + +W + +AD M++LM FF+++   +  D    K I                 
Sbjct: 5   PEEEKAGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q              I +  +    +  + +  ++                     
Sbjct: 54  AFGVQREVPVLEVPMGTSPIFDKFSPAPPEPTVVNEVKQTTTD----------------- 96

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                                                K             +L K +   
Sbjct: 97  -----------------------------EQPELETLKSPTDVAVESAIQDELQKTLEQV 127

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
            S L        V        I++ + ++     F   S+    E   +L ++ ++L   
Sbjct: 128 RSVLETAIEDGRVNLTQDHHRIIVRVEEK---GAFPSGSADLTWEFEGLLLEMADILVEI 184

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320
              ++I GHTD  P R      NW LS  RA +    L+  G +   R+  ++G A+   
Sbjct: 185 PGKLTIEGHTDDVPIRTQRFYSNWDLSAARAAAVANALLAEGKLKPSRL-AVTGLAYTEP 243

Query: 321 KIASDP--MNSANRRIDILVE 339
           ++ +      + NRR++I+++
Sbjct: 244 RVPNTSSENRAKNRRVEIIID 264


>gi|220934494|ref|YP_002513393.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995804|gb|ACL72406.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 290

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 1/223 (0%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
               Q+   + F+ + S                        +    +  E+   L   + 
Sbjct: 50  TDDEQKAAISEFFQNPSAFMGASPTPAFEAGTGTSPSLIDFEGAIDMAPEQMAELDAETI 109

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           E++   + K+RL+ L + +   +      +     +L + T  G+ I I+D+ N PMFD 
Sbjct: 110 EELAEQQEKERLEALMQALEEAIERSQALEPFKDQLLLDITPEGLRIQIVDKENRPMFDL 169

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+     +  +LQ++G ++      ISI GHTDA PF      NW LS DRA +A + L
Sbjct: 170 GSAQLRGYSTAILQELGGLINQVPNKISITGHTDARPFLRPNYSNWELSSDRANAARRAL 229

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E +I ++ G A   L   ++P N  NRRI I+V  R+
Sbjct: 230 VSGGMDEAKIGRVVGLASTVLFDKANPENPINRRISIIVMTRE 272


>gi|152965627|ref|YP_001361411.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
 gi|151360144|gb|ABS03147.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
          Length = 342

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 109/310 (35%), Gaps = 61/310 (19%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + YAD +TVLMA F+V++ ++  D       +                   +      
Sbjct: 23  WLVAYADMLTVLMALFIVLFALSQIDQLKFAQFKDGLT---------------KGTSSSN 67

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
            + +     ++       +D+   ST Q  Q          L                  
Sbjct: 68  QAVSGSAGILEATNGDMPIDITPNSTGQPLQQSVSTEVRKIL------------------ 109

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                             +        ++   A +  +  +++AK+I + L+        
Sbjct: 110 ------------------QAAQTAQTQEDLKAAQEEVQDYREIAKQIDAALTA---KGDQ 148

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             V +  T  G+++ ++       F  +S+    +   VL  I  +LA     I+++GHT
Sbjct: 149 DQVTYRITSDGLVVGLVAD--NVFFANASAEVEEKGREVLDVIAPILAQLPNDIAVQGHT 206

Query: 273 DASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           ++         RDNW LS  RA +  Q    +G+  + +   +G+A  R    ++   + 
Sbjct: 207 NSLSLSATTRYRDNWDLSAARAMTVVQRFTAAGIPGNHL-SGTGYADSRPLYPNEDPKAL 265

Query: 331 --NRRIDILV 338
             NRR+D++V
Sbjct: 266 TGNRRVDLVV 275


>gi|332294873|ref|YP_004436796.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
 gi|332177976|gb|AEE13665.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
          Length = 243

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              + ++ +   + L ++      +++  +    P S  +   +     L+     +   
Sbjct: 46  ATINASKFAATAQALREAFGGYTILDRGSSVIGEPGSTTQSAPVVPDSALKAQEASLKIA 105

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                + N  +  + +T R  ++  + D+    +FD   +   P+   +L KI  VL   
Sbjct: 106 EILRQSLNPNQFSVIQTERGYLISILTDK---ILFDSGKANLKPDAFPLLTKIAAVLKKI 162

Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              + + GHTD  P   +    NW LS  RA S  +  ++ G+S  R+  I+G+A  R  
Sbjct: 163 DNEVYVEGHTDNVPIHTVEFPSNWELSAARAASVAKYFIEQGISPSRLV-IAGYADTRPV 221

Query: 322 IASDP--MNSANRRIDILVEDR 341
            ++D       NRRIDIL+  +
Sbjct: 222 ASNDTPQGRQKNRRIDILITKK 243



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
                   W + Y+D +T+LMAFF++++ +   +     A  Q             +G  
Sbjct: 16  HDSAGGMRWLLTYSDMITLLMAFFILLFSMATINASKFAATAQALREAFGGYTILDRGSS 75

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               P   +    +         + S+ +
Sbjct: 76  VIGEPGSTTQSAPVVPDSALKAQEASLKI 104


>gi|238762341|ref|ZP_04623312.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
           ATCC 33638]
 gi|238699326|gb|EEP92072.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
           ATCC 33638]
          Length = 302

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/342 (20%), Positives = 126/342 (36%), Gaps = 67/342 (19%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M SH        Q  IIK+      +  + G+WK+ +ADF   +MA F+V+WI+    ++
Sbjct: 1   MRSHARGG----QTTIIKRSARKRHSGGHSGAWKVAFADFTLAMMALFMVLWIVGVVSEE 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            ++ I    N        +   I  +         N ID       TK+++ +++     
Sbjct: 57  ERQEIVAQLNGQTIFSQQSFISIPSKSKSGGGKFSNSIDGKEQAKETKSNLAVEV----- 111

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                               +    S     E  + + + T    + +  +   +P   +
Sbjct: 112 ------------PDPEQSLEDVVDKSRKEMEELSRIIMQITSAYDAQSNLQMEVVPQGLR 159

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   K++   Q  +  +                                  TP F + 
Sbjct: 160 ILIQDDKQRDMFQRSSAVL----------------------------------TPFFGRL 185

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299
            +   P    +              I I GHTDAS +R+    +NW LS +RA  A++ L
Sbjct: 186 LAELAPAFNEM-----------DNKIIITGHTDASRYRDQVMYNNWNLSGERALMAHKAL 234

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +K G++E R+ +I+  A   L   ++P+ + NRRI+I+V  +
Sbjct: 235 VKGGLTEGRVLQINAMADQMLLDPAEPLAAKNRRIEIMVLTK 276


>gi|315122280|ref|YP_004062769.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495682|gb|ADR52281.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 158

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 117/158 (74%), Positives = 137/158 (86%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           MKRKKR+QDL +KIS+TLSGLVA++IVKG+LF+TT  G+LISIID  NTPMFDKSSSIPL
Sbjct: 1   MKRKKRMQDLEQKISTTLSGLVANHIVKGILFKTTPNGMLISIIDHNNTPMFDKSSSIPL 60

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           PE I++LQKIGE L+ S E ISI GHTDASPFR+   DNW+LSLDRAYS YQ+LMKSG+S
Sbjct: 61  PEMILILQKIGEALSQSNENISIEGHTDASPFRHSTGDNWKLSLDRAYSTYQILMKSGIS 120

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           E RISKISG A H  KI+SDPMN+ANRRI+ILV+D +G
Sbjct: 121 EKRISKISGLAQHNPKISSDPMNAANRRIEILVQDGEG 158


>gi|88858085|ref|ZP_01132727.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
 gi|88819702|gb|EAR29515.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
          Length = 321

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 102/326 (31%), Gaps = 69/326 (21%)

Query: 19  KKVAI---DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           ++          N++  W + YAD+MT++ A F+V++ +  T ++    +          
Sbjct: 2   RRYRQLTISSENNHVERWLVSYADYMTLMFALFVVLYSLAITKEEEFSVLSDSLESIFVQ 61

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                                       E  T++   +K      K   +   N      
Sbjct: 62  ---------------------------PEIRTEDGSGVKGEGLLLKNSVESEFNLYGNAI 94

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             ++          D    K             K     L  L++E   A+       + 
Sbjct: 95  TDEERGPELVDGFGDLVNLK------------KKRLGSPLESLNQELKTALFDHIEAGEA 142

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             ++                        + I +    +  +F   S++       V++ I
Sbjct: 143 KVELDQD--------------------WLTIEL---SSGLLFGSGSAVATLNAKKVVKDI 179

Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            E++      I IRG TD  P  N     NW+LS+ RA      L + G++  ++  I G
Sbjct: 180 YEIVKSVDNYIRIRGFTDDRPINNELFSSNWQLSVARATEMLLQLERLGINPAQM-AIEG 238

Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338
           +  H    +++       NR++ I +
Sbjct: 239 YGEHSPTSSNETEEGRAANRKVVIAL 264


>gi|295696765|ref|YP_003590003.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
 gi|295412367|gb|ADG06859.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
          Length = 266

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 10/215 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +   +++ S        +  +   KG         + S          P   +    +  
Sbjct: 42  DMYKFVNLSASLSQALYNQNQVQLKGLGTTGLIAAQPSAGPPGRVPPAPDFLKTPEQVAE 101

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +++L  +  ++ S +       +   V+ E    G+LIS+ D     +FD   +   PE 
Sbjct: 102 ERQLAQIKLQLQSFIQK---QGVAGQVVVEDKPKGLLISLRD---VILFDTGKADLKPEA 155

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  +   LA     + I GHTD  P        NW LS  RA +  + L   G+   
Sbjct: 156 RKLLDGLLPFLAQVGNPLEIEGHTDNRPIHTAQFPSNWELSTARALTVLEYLQAKGIDPK 215

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           R+S  +G+   R   ++D       NRR++I +E 
Sbjct: 216 RLSA-TGYGEWRPVASNDNPEGQALNRRVNITIER 249


>gi|289523562|ref|ZP_06440416.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503254|gb|EFD24418.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 239

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
            + + K     +  L ++N++  V       GI+ISIID     +F   S   +P    +
Sbjct: 88  AEQVKKVHEMMVQLLESENLMNEVTVRIEERGIVISIID---GLLFQSGSVELIPPARRL 144

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           + KI +++      IS+ GHTD  P  R   RDNW LS  RA      L+++G+   R+ 
Sbjct: 145 IYKIAQIINDLPNQISVEGHTDNVPLNRGPYRDNWGLSAMRAAVVGSYLVEAGIDPKRLR 204

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            + G+   R  + +D       NRR+DI++ +
Sbjct: 205 TV-GYGQSRPLVPNDTEEHRRINRRVDIVILN 235



 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    D P   G+W   Y D +T+L+ FF+ ++  +  D    + +   F      L   
Sbjct: 3   RKRKKDLPQLRGNWLTTYGDMVTLLLTFFVFLYSFSTIDVQKFQKMIYSFQDAIGVLPGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
              I     P E + Q        + +T N+  +K
Sbjct: 63  VTTI-----PGEETMQGAQLTGPGQEMTLNAEQVK 92


>gi|260466608|ref|ZP_05812796.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259029614|gb|EEW30902.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 466

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 2/267 (0%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P  +      +   D   P +++++ ++             D  +    +       + +
Sbjct: 197 PGAEASAQRPRIEGDPVKPGDKAAETQVAKVKAVPPAPPLKDAPLEPLAKDAAATMAKAS 256

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                +++ S+   ++         +  K+     S    +     P + EK       K
Sbjct: 257 DIKAGDTKASDTKASNAKAGEGNAAEAAKADATLASREAAKPEAAKPEAAEKAPTAAALK 316

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
              D+ ++++        D +  GV  E T  G++ISI D+ +  MF+  S++P  E ++
Sbjct: 317 AAADVKRQLADAFKPG--DKLHDGVSVEATDKGVVISITDRLDFGMFEVGSALPSRELVL 374

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            ++KIG ++      ISI GHTDA PFR+ + DNWRLS  RA+SAY +L++ GV E RI+
Sbjct: 375 AMEKIGRIVNSQKGTISINGHTDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRIT 434

Query: 311 KISGFAHHRLKIASDPMNSANRRIDIL 337
           +++GFA  + K  +DPM + NRRI+IL
Sbjct: 435 EVAGFADRQPKDPADPMAAVNRRIEIL 461



 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 12/201 (5%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
            + +    + II++      D  ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A
Sbjct: 4   AEADHGRHEIIIVRHAHGDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAA 63

Query: 65  IEQYFNPFGKNLMTASKGIFD------------EQNPPERSSQNKIDLSIDEHITKNSVD 112
           +  YFNP       +S+   +             ++P + + ++  D +     ++   D
Sbjct: 64  VASYFNPVKLVDRNSSRKGLEDLGDGPNAIGATAESPQQATGKSGQDGTGGAGTSERKQD 123

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            +    +++       +    LS          ++++  + G                 +
Sbjct: 124 KQEQQQSERSDEHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPATGASGGASYRD 183

Query: 173 YFLPPLSKEKILAMKRKKRLQ 193
            F P    +++ A   +   Q
Sbjct: 184 PFEPDFWSQQVAAPGAEASAQ 204


>gi|89067516|ref|ZP_01155029.1| putative chemotaxis MotB protein [Oceanicola granulosus HTCC2516]
 gi|89047085|gb|EAR53139.1| putative chemotaxis MotB protein [Oceanicola granulosus HTCC2516]
          Length = 270

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 116/331 (35%), Gaps = 67/331 (20%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           ++  IIIK+K       ++ G+WK+ YADF+T +MA                  +    N
Sbjct: 5   SNAPIIIKRKKITGGDGHHGGAWKVAYADFVTAMMA---------------FFMLMWLLN 49

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              +         F    P  R S         ++I  ++   + G+             
Sbjct: 50  ATTEQQRKGIADYFSPTIPINRISGGGDGAFGGDNIFTDNTLAQSGTNPGATG------- 102

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                                                       +P  + E+   +   +
Sbjct: 103 ------------------------------------------DAVPGATAEEAAQVAALE 120

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++++  + +      ++AD  ++ ++ + T  G++I I D    P+F   ++ P P T+ 
Sbjct: 121 QIEE--QLLGRGGESMIADEALQHIVTKLTDEGLVIEIFDLDGAPLFAPGTAEPEPVTVE 178

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +      VLA     +++ GH  A P        W LS  RA    ++L  SG + +RI 
Sbjct: 179 LAAVFARVLALVDNDVALAGHVRARPVVVADSRVWPLSTSRATRFRELLEASGQAPERIV 238

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +++G A     + +      N R++++V   
Sbjct: 239 RVTGHADRAPAVRNAVSL-RNNRLEVVVLRS 268


>gi|115524590|ref|YP_781501.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
 gi|115518537|gb|ABJ06521.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
          Length = 280

 Score =  130 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 107/314 (34%), Gaps = 60/314 (19%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W + +AD M +L++FF+++   +  D    + +                        
Sbjct: 17  GHGWFVTFADLMALLVSFFVMLVSFSHQDQVKLQIVAGSMRDAFGVQK------------ 64

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                  +    ++        ++K       +Q     +       ++     +     
Sbjct: 65  -----DARYSAIVETDGVPVRGNVKNVDRVAAEQSTPFPSPDEGGGMAKTGAQIQ----- 114

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                                        S     A++    + +++K            
Sbjct: 115 ---------------------AEREFALASASLRQALQDMPEIAEVSKN----------- 142

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                V+FE T+ G+ + I+DQ   PMF + S +P   T ++++++   L  ++  I++ 
Sbjct: 143 -----VMFEETKEGLNLQIVDQDGRPMFPEGSPVPFQRTKLLIERLAAPLRATSLRITLV 197

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT ++        D + LS  RA +  Q+L + G+    +  ++G A        DPM 
Sbjct: 198 GHTSSAVLPGRSDADGFDLSWQRANAVRQILKREGLPIANVLSVTGKADSEPLFPDDPML 257

Query: 329 SANRRIDILVEDRQ 342
           +ANRR+ I +    
Sbjct: 258 AANRRVTITLLREN 271


>gi|90418368|ref|ZP_01226280.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338040|gb|EAS51691.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 413

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 1/253 (0%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P         D              +  +   +      +  +     S +         
Sbjct: 160 PGLNGGDAYRDPFDPASWQLAPNATESAAVIDEAPPSEFKTAVLPNDMSDEPVPVDAETQ 219

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
            ++    +     +   +   E              A+ +  R  +L  +I++  +    
Sbjct: 220 AEAVAEANAEAEAETPDAGEAELAEADADAKPADGEAVAQADRADELKAEIAAEFARQ-G 278

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
           + +           G+ ISI D   + MF+  S+ P P+ + ++++I  VL+     +SI
Sbjct: 279 EPLPTNFEVVPGEGGVTISIADDMMSGMFEVGSARPTPQVVAMMERIASVLSKQPGNVSI 338

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           RGHTD+ PFR+   DNWRLS  RA+ AY +L + G+ EDR+  I G A    KIA DP  
Sbjct: 339 RGHTDSRPFRSAQYDNWRLSTARAHMAYYMLARGGLDEDRVKAIEGVADRAPKIADDPEA 398

Query: 329 SANRRIDILVEDR 341
           +ANRRI+IL+ + 
Sbjct: 399 AANRRIEILLTEP 411



 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 1/193 (0%)

Query: 1   MNSHGDKNQ-ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD 59
           M         +  + II++++    +  ++ G WKI +ADFMT +MAFFLVMW+  A+D 
Sbjct: 1   MTDQSGAGHLDRQEIIIVRRRGGHGEEAHHGGVWKIAFADFMTAMMAFFLVMWLTQASDM 60

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
            T+K + QYFNP   N  + +    ++ +      +N+  +S  +           G   
Sbjct: 61  ATRKQVAQYFNPIRLNDASPATRGVEQSDDGASRDENENGISKADTNGDPHGKPLAGDQE 120

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
             ++     +    L+        + +     +         +   +     +     L+
Sbjct: 121 GGEEEALFRDPYAVLAEIAAEGASETTGELQGKPDGTGLPGLNGGDAYRDPFDPASWQLA 180

Query: 180 KEKILAMKRKKRL 192
                +       
Sbjct: 181 PNATESAAVIDEA 193


>gi|255021344|ref|ZP_05293392.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969207|gb|EET26721.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
           ATCC 51756]
          Length = 279

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 97/326 (29%), Gaps = 71/326 (21%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   ++   N   W + YADF+T       +++                       +   
Sbjct: 3   RRKQEEEWENHERWLVSYADFIT-------LLFAF------------------FVVMYAI 37

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S     +      +  +            +   ++  + +           +  ++    
Sbjct: 38  SSVNEGKYRVLSETLVSAFT-----GHPMSITPVQNPAESAGPTSVLKLPPLPAVAKIAA 92

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +      +                                  K  A K    LQ L K++
Sbjct: 93  TPSVAKGVVSP-------------------------------KAQAPKSNTDLQQLQKQM 121

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              L  L+ D     V   ++  G++I   D     +F    +   PE    L  I ++L
Sbjct: 122 EKLLQPLIRDG---SVAIHSSALGVVI---DLNAKILFPSGQATLTPEAQQNLAAIAKIL 175

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + G T+  P R      NW LS  RA +  ++ +  GV+ + +    G+  +
Sbjct: 176 KTVPYQIQVNGFTNDLPIRTAQFPSNWYLSAARAVAVTELFIAEGVNPEHLVAA-GYGQY 234

Query: 319 RLKIASDPMN--SANRRIDILVEDRQ 342
                ++     + NRR+ I+V   Q
Sbjct: 235 HPIEPNNTAAGLAMNRRVSIVVVAPQ 260


>gi|150016469|ref|YP_001308723.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
           8052]
 gi|149902934|gb|ABR33767.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 251

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 11/184 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +  S N          ++    ++  +++L D+ KK+   ++      +   V       
Sbjct: 66  VSDSSNSPPTVIDQQNTQNNSDSIAEEEKLSDVKKKVDDLVNDS---ELKGSVTTSIQER 122

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282
           G++IS  D      F+   S   P+    L  I ++L      I + GHTD     N   
Sbjct: 123 GLIISFNDS---VFFNSGQSTIKPDWQGKLISISKILNDIDNYIHVEGHTDNVAINNDYF 179

Query: 283 -DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             NW+LS  RA +  + L+  G V  +R+S + G+  +R    ++     +ANRR+DI++
Sbjct: 180 HSNWQLSAVRAANVVEFLISKGNVKPERLSSV-GYGEYRPVKDNNTEDGRAANRRVDIVI 238

Query: 339 EDRQ 342
            + +
Sbjct: 239 LNTK 242



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 33/87 (37%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       ++   W + Y DF+T++M FFL+M+ I+  D    + +         +    
Sbjct: 2   KKNTKKEKDDTERWMLSYLDFITLMMIFFLMMYAISNVDTKKSQTLANSLKIGFNSGNGE 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHI 106
           +     + +    +  ++ +   +   
Sbjct: 62  NVIAVSDSSNSPPTVIDQQNTQNNSDS 88


>gi|322421034|ref|YP_004200257.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320127421|gb|ADW14981.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 292

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 11/222 (4%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N +       +      S  ++ + G+   K  DL + +   E        +   L   
Sbjct: 75  RNALATDKKGLEDALKSTSDAKNQKIGELSQKLGDLGQKLADLEADNKRLRDEVARLQKL 134

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++ +Q  +K  S  L  +  +     V     +  + ++++D     +FD   +   PE
Sbjct: 135 KEEEVQKTSKTYSDLLEQMKGEMAKGQVTISELKGKLTVNMVDS---VLFDSGKAEVKPE 191

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKS 302
            +VVLQK+ ++L +  + +  I GHTD              NW LS  RA +  + L + 
Sbjct: 192 GLVVLQKVIDILKNIKDKVVRIEGHTDNVQIVGQLAKRYPTNWELSAARAINVTRYLQQQ 251

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+    ++ ++ +  H+    +D     + NRRI+I++  ++
Sbjct: 252 GLDPALLAAVA-YGEHKPVAPNDTDEGRAKNRRIEIVLVAKE 292


>gi|260061425|ref|YP_003194505.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
           HTCC2501]
 gi|88785557|gb|EAR16726.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
           HTCC2501]
          Length = 446

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 80/285 (28%), Gaps = 16/285 (5%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
             +  F  +G        G+       +       D                   +    
Sbjct: 161 QYKHAFEDYGVKHFQHLAGVSIRFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDSDGDG 220

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            +  ++     + S +   C ++         D C +     +++   +     ++ +  
Sbjct: 221 IEDAKDACPNEAGSMEMNGCPDADGDGVADKDDACPNEAGLPALSGCPDADGDGVADKDD 280

Query: 184 LAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                    +         D    +            V           +   + +   T
Sbjct: 281 ECPSEAGPAENNGCPWPDTDGDGVLDKDDECPDTAGTVANNGCPEVTEEVQAQLNEYART 340

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD   +   PE+  V   I  +L        ++ GHTD+         N +LS +RA 
Sbjct: 341 ILFDTGKASLKPESTRVFVDIIRILDQYPNSRFTVEGHTDSV---GSNSLNQKLSEERAN 397

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S    L+  G+   R+  + G+   R    ++       NRR++I
Sbjct: 398 SVRDFLINEGIDASRLEAV-GYGEERPIATNNTRAGRTQNRRVEI 441


>gi|229827389|ref|ZP_04453458.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
           49176]
 gi|229788327|gb|EEP24441.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
           49176]
          Length = 305

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 35/329 (10%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   ++ P    +W   ++D M +L+ FF++++ +++TD      I +           
Sbjct: 3   RKKKTEEAPAGAPAWMATFSDLMNLLLCFFVLLFSMSSTDRAKYNEIVEAVTSSFSIFSG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +                         +   L     +Q  +     +N+   + ++
Sbjct: 63  GGSAL-------------------------DQGILISSGVSQLNELAEYYSNLAVDNAAK 97

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           +      +   D+ K ++  ++     +  K E        +      K  K   +  K 
Sbjct: 98  EDGTKGGNGKSDNGKIENNNENKPDNNNNGKAEEDKEVTKDEVVKKYQKELKETAE--KN 155

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                  +    +   V  +   +   I +       +FD  S+        VL K   +
Sbjct: 156 YEKASEAINQFKLNDMVQLKMDTSYNYIGLSID-GYFLFDSGSAELKKGADKVLDKAAGI 214

Query: 259 LAHSTE-VISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
           L    +  I I GHTD  P  N    ++N  LS  RA +  + L +   +   ++S  SG
Sbjct: 215 LMKFKDADIVIEGHTDNVPQTNTVKYKNNLWLSGARAMTVLEYLTEVEHMDPKKLSA-SG 273

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341
              +    ++        NRR++I + ++
Sbjct: 274 KGEYEPIASNKTAEGRQKNRRVEIKIFNK 302


>gi|296134255|ref|YP_003641502.1| OmpA/MotB domain protein [Thermincola sp. JR]
 gi|296032833|gb|ADG83601.1| OmpA/MotB domain protein [Thermincola potens JR]
          Length = 296

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               PL   +  A  +KK ++++ K      + +   N+   V+      G++IS+ +  
Sbjct: 68  EAPGPLVIPEQSAGAQKKEMEEMKKAKEQLDAYIKGQNLGGKVVVAYEERGLVISLKETM 127

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
               F   S+   P+    L KIG+VL +    + I GHT   P R      NW LS  R
Sbjct: 128 ---FFAIGSAAINPQAQETLIKIGQVLKNMPNNLRIEGHTCNLPIRTANFPSNWELSTAR 184

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +  + L+   G    R+S  +G+  +R  + +      + NRR+DI+V  
Sbjct: 185 ATNVVKFLIDRVGFDPKRLSA-TGYGEYRPLVPNTSEANRAMNRRVDIVVLR 235



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 30/97 (30%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+    +   N   W I YAD +T+LM FF++M+ I+  +      +    +       +
Sbjct: 3   KRAKEPEKAPNHERWLITYADLITLLMIFFIIMYTISNVNAKKFAQLSSSLSSALVGQNS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                                    E + K    L  
Sbjct: 63  GYFIGEAPGPLVIPEQSAGAQKKEMEEMKKAKEQLDA 99


>gi|284007193|emb|CBA72482.1| flagellar motor protein MotB [Arsenophonus nasoniae]
          Length = 320

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +   L    + R + L + +   + +     ++   +L +    G+ I IID  N PMF 
Sbjct: 101 EPNQLPETEQDRFKKLQQDLELLIMNDPRLQDLKPNLLIDLMDEGLQIQIIDGENRPMFA 160

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAY 296
             S++       +L  +  VL      IS+ GHTD++ +        NW LS DRA S+ 
Sbjct: 161 SGSAVIDKNMQKILHVLAPVLNDYPNKISLAGHTDSTAYAKGGYGYSNWELSADRANSSR 220

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + L+  G+ E +I ++ G A       ++P  +ANRRI ILV +++
Sbjct: 221 RTLISGGLDEHKIMRVVGMASTVPL-ENNPAAAANRRISILVLNKE 265


>gi|206890444|ref|YP_002248653.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742382|gb|ACI21439.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 252

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 8/190 (4%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
           L       +  +  +      + +      + K+  +   K I   L       +   ++
Sbjct: 68  LESGQSFMQQSSAIQQEVKTSVQESTPSETRAKRFEEQFKKTIEEKLKE-----LKDHIM 122

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
            +T   G+ I I+D    PMF  SS+ P  +   +L+ + E +      +++ GHTDA P
Sbjct: 123 IDTVEGGVRIQIVDLEGEPMFPLSSAEPTEKAREILKVVAENIKDEPARVAVEGHTDAVP 182

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           FR     NW LS  RA SA + + + GV+ ++I+++ G+A     I  DP +  NRRI I
Sbjct: 183 FRGGKTTNWELSTARASSARREIERYGVAPEKIARVVGYADTLPLIKDDPKDPRNRRISI 242

Query: 337 LVE---DRQG 343
           ++    ++QG
Sbjct: 243 ILMFEKEKQG 252



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 66/175 (37%), Gaps = 2/175 (1%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +  +  II KK+      ++ GSWK+ YADF T +MAFFL++W+++  D   + AI  YF
Sbjct: 3   DKSKTTIIVKKIKKGHEAHHGGSWKVAYADFTTAMMAFFLLLWLLSMLDPVKRAAIADYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                NL+ + +    + +  ++  +  +  S          + +   T ++K  +  ++
Sbjct: 63  R--YFNLLESGQSFMQQSSAIQQEVKTSVQESTPSETRAKRFEEQFKKTIEEKLKELKDH 120

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            +             +              +    + +           ++  + 
Sbjct: 121 IMIDTVEGGVRIQIVDLEGEPMFPLSSAEPTEKAREILKVVAENIKDEPARVAVE 175


>gi|148265913|ref|YP_001232619.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146399413|gb|ABQ28046.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 287

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 11/189 (5%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++L + I   EN           L   +++ +Q  +K     L  + ++     V     
Sbjct: 103 SELRQKIADLENENAKLKEDIASLKKAKEEEVQKTSKTYEDLLEKMKSEISQGQVTISEL 162

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279
           +  + ++++D     +FD   +   P+ +VVLQK+ ++L +  +  I I GHTD      
Sbjct: 163 KGKLTVNMVDA---VLFDSGKAEVKPDGLVVLQKVIDILKNIKDKSIRIEGHTDNVSIVG 219

Query: 280 I----ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
                   NW LS  RA +  + L + G+    ++ I+ +   +    +D     + NRR
Sbjct: 220 ALAKKYPTNWELSAARAINVTRYLQQQGIDPTNLAAIA-YGEFKPVAGNDTPEGKAKNRR 278

Query: 334 IDILVEDRQ 342
           I+I++  ++
Sbjct: 279 IEIILVPKE 287


>gi|213647163|ref|ZP_03377216.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 275

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+I+ +       I +YF       +T    I + ++P      +    
Sbjct: 1   MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGNRIANSKSPIPGGGDDYTQQ 60

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             +     N  +LK                                              
Sbjct: 61  QGEVEKQPNIDELK---------------------------------------------- 74

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                   + E   L  L  +    ++   +L+ L   +   L   V + +   ++    
Sbjct: 75  -------KRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           R              MF   S+   P    +L+ I  VL      IS+ GHTD  P+ N 
Sbjct: 125 RP-------------MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANG 171

Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                NW LS DRA ++ + L+  G+   ++ ++ G A         P ++ NRRI +LV
Sbjct: 172 EKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLV 231

Query: 339 EDRQ 342
            ++Q
Sbjct: 232 LNKQ 235


>gi|153956379|ref|YP_001397144.1| hypothetical protein CKL_3788 [Clostridium kluyveri DSM 555]
 gi|219856692|ref|YP_002473814.1| hypothetical protein CKR_3349 [Clostridium kluyveri NBRC 12016]
 gi|146349237|gb|EDK35773.1| MotB [Clostridium kluyveri DSM 555]
 gi|219570416|dbj|BAH08400.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 254

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 11/206 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              K     +S K       + +           + P   ++     ++K+L +L  ++ 
Sbjct: 40  SASKYKQVAESLKMSMGGGKSVIGSDDTSSIKETVDPEETQQTDTDDQEKKLSELKSEVD 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L       +   V       G+++S+ D     +FD   +   PE    L +IG++L 
Sbjct: 100 KYLQNS---EMSGSVSTSINERGLIVSMNDSL---LFDTGKADIKPEFQQKLVEIGKILN 153

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + I GHTD  P  N     NW+LS DRA +  + L+K +G+  +++S I G+  +
Sbjct: 154 QLGNYMRIEGHTDNIPISNNQYSSNWKLSCDRASNVTEFLIKSAGIEPEKLSAI-GYGEY 212

Query: 319 RLKIASDPMN--SANRRIDILVEDRQ 342
           R    +      + NRR+DI++ + +
Sbjct: 213 RPVGDNSTDEGKAKNRRVDIVILNSK 238



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K        N   W + Y+D +T+LM FF+VM+ ++       K + +            
Sbjct: 2   KKKKKHAEENTERWLLTYSDLITLLMIFFVVMYSMSNISASKYKQVAESLK--MSMGGGK 59

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           S    D+ +  + +   +     D    +  +       ++  Q   +
Sbjct: 60  SVIGSDDTSSIKETVDPEETQQTDTDDQEKKLSELKSEVDKYLQNSEM 107


>gi|110632645|ref|YP_672853.1| flagellar motor protein MotB [Mesorhizobium sp. BNC1]
 gi|110283629|gb|ABG61688.1| OmpA/MotB [Chelativorans sp. BNC1]
          Length = 452

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 1/276 (0%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           + +         + +             + +   S  +   + +   ++     +++   
Sbjct: 178 EAYRDPFAPDFWSQQVAMPRIGVEGDPDEAREQPSGADIKAEQTGQHQLAGIEPEQETSD 237

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
             +          +   KN    +    +D  +S         EE               
Sbjct: 238 ALSLKRVPQVEPLAPEEKNEPATEGVP-EDGVQSASPGNESASEEVSATAGEPDAPANEK 296

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             +      A   ++    L  + +   V       G+LIS+ D     MF   S++P  
Sbjct: 297 ANEAHENAAAGIRAALAQALNGEGLASSVTVSAGEEGVLISVTDDIRNGMFPVGSAVPER 356

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             +  ++KIG+ LA     I I GHTDA PFR+   DNWRLS  RA++A  +L++ G+ E
Sbjct: 357 ALVGAMEKIGKTLAGQPGTIRIHGHTDARPFRSDTYDNWRLSTARAHAAQYMLIRGGLDE 416

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            RI++++GFA  +LK    P+  ANRRI+IL+E  Q
Sbjct: 417 TRITEVAGFADRKLKEPESPLADANRRIEILLEVPQ 452



 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
             +++   + II+++    +D+ ++ G WKI +ADFMT +M FFLVMW+INA ++ T+ A
Sbjct: 4   ATEDERQPEIIIVRRGGDDEDSEHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTRAA 63

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  YFNP        ++   +E     + S                 D   G  + +   
Sbjct: 64  LASYFNPVKLIDRNTNRKGLEEVGQGPQVSTEADQSEKSTDQPSGENDKTSGPADFQNAT 123

Query: 125 QRLE-----------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              +           N    L+          +++R  E G  +   +          + 
Sbjct: 124 DLADTRKYSDQNFFSNPYAVLAEIAADVGQDQNVSRKGEGGVQIAGPSSGASGGEAYRDP 183

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           F P    +++   +          +   + + + A+   + 
Sbjct: 184 FAPDFWSQQVAMPRIGVEGDPDEAREQPSGADIKAEQTGQH 224


>gi|124009612|ref|ZP_01694285.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
           23134]
 gi|123984753|gb|EAY24733.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
           23134]
          Length = 493

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 97/273 (35%), Gaps = 8/273 (2%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +L    KG    +  P++ +    D   +   TK  ++LK      K      +++
Sbjct: 225 PDKADLCPDVKGGKKTKGCPDKDNDGVADKDDECPNTKGEINLKGCPDADKDGVPDKDDD 284

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              +      + C +S        KD C         N   +     +  +K     +K 
Sbjct: 285 CPDVKGLVTLKGCPDSDGDGIPDKKDDCPDVKGSTKYNGCPDTDGDGI-IDKKDDCPKKA 343

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +          G+         +           ++++ +  +F    +I  P +  
Sbjct: 344 GLAEFNGCPDRDKDGVPDKVDNCPDVPGVKDNRGCPEVLERASKVLFAPGKAIINPVSFP 403

Query: 251 VLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL ++ E+L    +  I + GHTD          N +LS DRA +    L+K G+++ RI
Sbjct: 404 VLNELSELLKKYASTKIYLEGHTDNQ---GDDDANLKLSKDRAQAVADYLIKKGIAKSRI 460

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              +GF   +    +        NRR+D+ + +
Sbjct: 461 ES-TGFGETKPIADNKTAAGRKKNRRVDMKLTN 492


>gi|120437695|ref|YP_863381.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
           protein [Gramella forsetii KT0803]
 gi|117579845|emb|CAL68314.1| OmpA/MotB family outer membrane protein containing thrombospondin 3
           repeats [Gramella forsetii KT0803]
          Length = 472

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 90/301 (29%), Gaps = 19/301 (6%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           I  T +   K     F+  G      + GI       +       D   +        + 
Sbjct: 169 IALTLESKYKH---TFDTDGAQHFQHAAGIKFMFGGTDSDGDGIYDKDDECPEQPGLEEF 225

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
                      +  ++     +   + + C +S         D C        +N   + 
Sbjct: 226 NGCPDTDGDGIEDRQDACPNEAGLAEFDGCPDSDGDGVADPDDDCPEVAGLAEMNGCPDA 285

Query: 174 FLPPLSKEKILAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
               +  ++          +         D    +                        +
Sbjct: 286 DGDGVRDDEDNCPDEAGPAENDGCPWADTDGDGVLDKDDDCPEEAGPAASNGCPEPTAEV 345

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283
           +  + +   T +FD + +   PE+   LQ I +++    T +  I GHTD+         
Sbjct: 346 ISELNEYSKTVLFDLNKATIRPESEEALQSIHDIMHEYSTTIFHIEGHTDS---SGSDSY 402

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N +LS +RA S    L ++G+   R++   G+   +    +        NRR++I ++  
Sbjct: 403 NMKLSKERAASVATWLEQNGIPAKRLTS-EGYGETQPIATNSTAKGRQDNRRVEISLDKD 461

Query: 342 Q 342
           +
Sbjct: 462 K 462


>gi|298505133|gb|ADI83856.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
           KN400]
          Length = 289

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 96/258 (37%), Gaps = 11/258 (4%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E +     DL+  +           G      + +     +        +++ +      
Sbjct: 33  EEADNLSKDLTTLQEKYSALSSENEGLKGTLAKLKDEAAGLALDKEKLTTDNRELQQVLQ 92

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++         +L + +++ E       +        +++++++++K     L  +  + 
Sbjct: 93  AKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEKVREVSKTYEDLLDKMKGEI 152

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIR 269
               V     +  + ++++D     +FD   +   P  + +LQK+ E+L   T+  I I 
Sbjct: 153 AQGQVTISELKGKLTVNMVDA---ILFDSGKAEVKPAGMDILQKVVEILKDVTDKAIRIE 209

Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           GHTD              NW LS  RA +  + L   G+    +S ++ +  +     +D
Sbjct: 210 GHTDNVQIVGNLAKRFPSNWELSSARAINVTRFLQSRGIDPAVLSAVA-YGEYHPVAPND 268

Query: 326 PMN--SANRRIDILVEDR 341
                + NRRI+I++  +
Sbjct: 269 TDEGKAKNRRIEIILVPK 286


>gi|125974911|ref|YP_001038821.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
 gi|281418623|ref|ZP_06249642.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
 gi|125715136|gb|ABN53628.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
 gi|281407707|gb|EFB37966.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
          Length = 266

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 89/328 (27%), Gaps = 73/328 (22%)

Query: 19  KKVAIDDTP--NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K   DD P       W   Y+D +T+++ FF++++ ++    +  + +    +      
Sbjct: 5   RKQLTDDEPASEGAPEWLQTYSDMVTLVLTFFVLLFSMSTISKEKFEQLSSSLSAAFMGT 64

Query: 77  MTASK-GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                 G  D             D+  D     N                +    I    
Sbjct: 65  GRGGVYGYNDGTVLYSVKENTTGDILEDGEEAFNEGKSAEIGAFTGGNADKEAQKIEDFI 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           N  Q+   +  L           K  + +KS+    N  +     +  +    K+ L+ +
Sbjct: 125 NEVQNIVEEMDLDE-------YVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKI 177

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I       V       +                 NT +F                  
Sbjct: 178 GTLIKQLNKNAVIQGHTDNLPI---------------NTMLFPT---------------- 206

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314
                                       NW LS  RA +    L+   GV   +++  +G
Sbjct: 207 ----------------------------NWELSTKRATNVVLFLVDECGVDPVKLTA-TG 237

Query: 315 FAHHRLKIASDPM--NSANRRIDILVED 340
               R    +D       NRRIDI++E 
Sbjct: 238 NGEFRPIAPNDTEENRQKNRRIDIVIEK 265


>gi|256003832|ref|ZP_05428819.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
 gi|255992170|gb|EEU02265.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
 gi|316939122|gb|ADU73156.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 1313]
          Length = 266

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 73/328 (22%)

Query: 19  KKVAIDDTP--NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K   DD P       W   Y+D +T+++ FF++++ ++    +  + +    +      
Sbjct: 5   RKQLTDDEPASEGAPEWLQTYSDMVTLVLTFFVLLFSMSTISKEKFEQLSSSLSAAFMGT 64

Query: 77  MTASK-GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                 G  D             D+  D     N                +    I    
Sbjct: 65  GRGGVYGYNDGTVLYSVKENTTGDILEDGEEAFNEGKSAEIGAFTGGNADKEAQKIEDFI 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           N  Q+   +  L           K  + +KS+    N  +     +  +    K+ L+ +
Sbjct: 125 NEVQNIVEEMDLDE-------YVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKI 177

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I       V       +                 NT +F                  
Sbjct: 178 GTLIKQLNKNAVIQGHTDNLPI---------------NTMLFPT---------------- 206

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314
                                       NW LS  RA +    L+   GV   +++  +G
Sbjct: 207 ----------------------------NWELSTKRATNVVLFLVDECGVDPVKLTA-TG 237

Query: 315 FAHHRLKIASDPM--NSANRRIDILVED 340
               R    +D       NRRIDI+++ 
Sbjct: 238 NGEFRPIAPNDTEENRQKNRRIDIVIDK 265


>gi|83589323|ref|YP_429332.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
 gi|83572237|gb|ABC18789.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
          Length = 249

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A  +     +LA+  +     +  + +   V   T   G+++S+ D     +F K S+
Sbjct: 79  APAPGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGLVVSVADA---VLFPKGSA 135

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM- 300
              PE   +L+++G  LA     + + GHTD  P    A   NW LS  RA +  +VL+ 
Sbjct: 136 DLTPEARDLLRQVGRALARLPNYLRVEGHTDNLPINTPAFPSNWELSTARATNVVKVLIS 195

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           ++G+  +R+S  +G+  +R    ++     + NRR+DI+V  
Sbjct: 196 EAGIKPERLSA-TGYGEYRPVAPNNSEADMARNRRVDIVVLK 236



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 3/99 (3%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++++       +    W + Y+D +T+LM FF+VM+ I+ T+     A+           
Sbjct: 3   VRREGHASKDNH--ERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGA 60

Query: 77  MTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLK 114
            T                +           + +   +L+
Sbjct: 61  PTTGILTSGGLTSIVPGIAPAPGQGDEGAELARARAELQ 99


>gi|119714995|ref|YP_921960.1| OmpA/MotB domain-containing protein [Nocardioides sp. JS614]
 gi|119535656|gb|ABL80273.1| OmpA/MotB domain protein [Nocardioides sp. JS614]
          Length = 302

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 112/327 (34%), Gaps = 61/327 (18%)

Query: 18  KKKVAIDDTPNN--LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +++    + P +     W + YAD +T+LM  F+VM+ ++  D+    A++         
Sbjct: 6   RRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGL------ 59

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                                             +      S+        LE+N+    
Sbjct: 60  ----------------------------------AEGFGAESSIMTGSTSVLEDNLAETG 85

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
               S     ++  D ++      + +  +            L  +   A    KRL+ +
Sbjct: 86  PDYVSSQAFQAMPADQQQLVRAAVTAEERR-----------RLQAQYAEAAAEAKRLEAV 134

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K++   L       + K V       G+++S++ +    +F+   +        V+  +
Sbjct: 135 RKQLMKALRAA---GLAKDVQATIDDRGLVVSLVSR--HVVFEPDIAQLSARGERVVDTL 189

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL      + I GHT+  P +      +W LS  RA +  + L + G    +   +S 
Sbjct: 190 SRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDVPKKRLSLSA 249

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVE 339
           F + R  +      S   N+R+DI+V 
Sbjct: 250 FGNERPLVDPATPGSQEINKRVDIVVL 276


>gi|254519159|ref|ZP_05131215.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
 gi|226912908|gb|EEH98109.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
          Length = 242

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 11/181 (6%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
              +          + K L    +++LQ +  +++  +  L  +     V       G++
Sbjct: 62  GSAENSGSSSDEQGELKPLVQTEEEKLQGIESQVNDIVKDLELEG---SVTTSIEERGLI 118

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284
           IS  D      FD + +    E    L  +  +L      + + GHTD  P        N
Sbjct: 119 ISFTDN---VFFDSAKADIKEELKPKLISVSNILNKIDNYVRVEGHTDNLPISTSDYHSN 175

Query: 285 WRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           W+LS  RA +  + L+  G +S  R+S + G+  +R    +  +   + NRR+DIL+ + 
Sbjct: 176 WQLSSVRASNVVEFLISYGSISPSRLSAV-GYGEYRPVADNTAEEGRAKNRRVDILILNN 234

Query: 342 Q 342
           +
Sbjct: 235 K 235



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               + P N   W + Y+D +T+LM FF+V++  ++ ++   K +            +  
Sbjct: 2   KKRVEKPENHERWLLTYSDLITLLMIFFVVLYSASSVNESKYKQLATSMGDVFIGGYSVL 61

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               +  +  +   + K  +  +E   +     
Sbjct: 62  GSAENSGSSSDEQGELKPLVQTEEEKLQGIESQ 94


>gi|218509333|ref|ZP_03507211.1| flagellar motor protein MotB [Rhizobium etli Brasil 5]
          Length = 228

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 68/227 (29%), Positives = 119/227 (52%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
                + +  + +             E  +     +++ GK        EK    E+N  
Sbjct: 2   ATEVAKAEDMKPVPLATDQKPAKDAKESKETKGAPETKGGKATDGKAPDEKKAEAEKNAD 61

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               + +     +R+K+  D  ++  +   G VA  + +G+    +  G+L+SI DQ + 
Sbjct: 62  HQKDADKSAAETERQKKEADELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDD 121

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            MF+  S++P  E ++ +++IG +L      +++RGHTD   ++    +NWRLS+DRA S
Sbjct: 122 SMFNIGSAVPRQEMVLAMERIGTILKERGGAVAVRGHTDGRQYKGGQNENWRLSMDRAQS 181

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           AY +L++ G+ E RIS++SGFA  RLK+ +DP N+ANRRI+ILV+  
Sbjct: 182 AYYMLVRGGLDEKRISQVSGFADRRLKLPADPFNAANRRIEILVQAD 228


>gi|88704268|ref|ZP_01101982.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
 gi|88701319|gb|EAQ98424.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
          Length = 272

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 101/324 (31%), Gaps = 67/324 (20%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    ++ +N   W + YADF+T+L AFF+VM+                    G   + +
Sbjct: 3   RRKPPESVDNHERWLVSYADFITLLFAFFVVMY-------------STSAVNVGNFRVLS 49

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +     P      ++ D    +        L                          
Sbjct: 50  DSIVRAFGLPGVSYDPSRPDGDGTQSSRIGLPQLDA------------------------ 85

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                                     ++           S     A+   +  +++A   
Sbjct: 86  -----------------------ERDAVRVPLQAAANSASTNPNAALGDIQAEEEIAGVE 122

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++  S +        +        + I I  +    +F   S   L  +I +LQ++ E L
Sbjct: 123 TALQSAVGDLVAPDRLAITGNDKWLEIKIPARM---LFPSGSRSLLASSIPMLQRLAETL 179

Query: 260 AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + ++GHTD  P R      NW LS  RA +  +V    G+   R+S + GF  +
Sbjct: 180 GGLPNEVVVQGHTDNQPIRNGQFPSNWELSTARAAAVARVFEDEGIDPSRLSAV-GFGPN 238

Query: 319 RLKIASDPM--NSANRRIDILVED 340
           R    +      + NRR+ ILV  
Sbjct: 239 RPITDNLTEESRAENRRVVILVRS 262


>gi|85859043|ref|YP_461245.1| chemotaxis protein [Syntrophus aciditrophicus SB]
 gi|85722134|gb|ABC77077.1| chemotaxis protein [Syntrophus aciditrophicus SB]
          Length = 254

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +DL  +I   +       +   V+      G+ I I+D+  + MF   S+ P  +   +L
Sbjct: 106 KDLEHRIKIAIDE-KLQTLKDQVMVSIVDNGLKIQIVDKEGSLMFPLGSAEPTFKAKEIL 164

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           + + E L  S   I + GHTDA+PFR+    NW LS  RA +A + L  + +   RI+++
Sbjct: 165 RIVSENLKDSPNRIIVEGHTDAAPFRSAQTTNWELSTARASAARRELENNSIDPGRIARV 224

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            G+A   L I  +PM++ NRRI I+V   +
Sbjct: 225 IGYADQELFIPQNPMDARNRRISIIVIQPK 254



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 38/66 (57%)

Query: 9  QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +    III+K        ++ GSWK+ YADF+T +MAFFL++W+I     + + A+ +Y
Sbjct: 2  DDQQPVIIIRKVKKRHHDGHHGGSWKVAYADFVTAMMAFFLLLWLITMVSPEKRSAVAEY 61

Query: 69 FNPFGK 74
          F  F  
Sbjct: 62 FKTFSV 67


>gi|254491758|ref|ZP_05104937.1| OmpA family protein [Methylophaga thiooxidans DMS010]
 gi|224463236|gb|EEF79506.1| OmpA family protein [Methylophaga thiooxydans DMS010]
          Length = 306

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 105/329 (31%), Gaps = 75/329 (22%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + ++K   +   +    W + YADF+T+       ++                       
Sbjct: 1   MARRKKHEEHENH--ERWLVSYADFITL-------LFAFFVV-----------MYSISSV 40

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                + + D             +      I++    L                      
Sbjct: 41  NEGKYRVLSDTLEAVFSDPVRSKNPIQIGEISRGEGKLTAE------------------- 81

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                                  +    +  I+  E    PP + E        + +++L
Sbjct: 82  ---------------------PGEPEKADYKIDLPEIPHRPPPATE-----NDIRTIKEL 115

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K++S  L+ ++     + V+ +     + + I   ++  +F+   +      + V+ KI
Sbjct: 116 TKQLSGALADMIE---TEDVIIKQGEDWLELEI---KSRVLFESGEARLERAAVPVIGKI 169

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L  S   I + G TD +P        NW LS  RA S   +L + G+  DR+S I G
Sbjct: 170 ADILQTSANPIQVEGFTDNNPINTSRFPSNWELSAARAASVVHLLDRYGIQPDRMSAI-G 228

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  ++    +        NRR+ ++V   
Sbjct: 229 YGEYKPIADNATEEGRQKNRRVVLVVLGS 257


>gi|221640801|ref|YP_002527063.1| chemotaxis MotB protein [Rhodobacter sphaeroides KD131]
 gi|221161582|gb|ACM02562.1| chemotaxis MotB protein [Rhodobacter sphaeroides KD131]
          Length = 285

 Score =  127 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 126/338 (37%), Gaps = 62/338 (18%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
           G   Q N   ++IK+K  +    ++ G+WK+ YADF+T +MAFF ++  +     + ++ 
Sbjct: 7   GMAGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFF-MLMWLLNATTEKQR- 64

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
                           KG+ D  NP    ++                D  +  T      
Sbjct: 65  ----------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAAN 108

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            R                                                      ++  
Sbjct: 109 DR------------------------------------------ATAERKARGEMGQEGA 126

Query: 185 AMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
               +K+L+++ K + + +   +    +++ V+   T  G++I I D  + P+F   +  
Sbjct: 127 DAAEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQ 186

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P      + + + E+L  +T  I++ GH  + P   I    W +S  RA     +L   G
Sbjct: 187 PEAVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEG 246

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + ++R+ ++SGFA  +  +  DPM   N R+++++  R
Sbjct: 247 LPDERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 283


>gi|89100104|ref|ZP_01172973.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
 gi|89085194|gb|EAR64326.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
          Length = 229

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D   SI   EN      +         ++  + L   +      L  + +   ++   T
Sbjct: 42  MDFYPSIIPFENPSENDKNVVNQGPDSDRQEEERLENLLQEVEGYLEKNGLEDVIVANRT 101

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN- 279
             G+++ + +Q    +F+   +  +      L K+G +L     ++ + GHTD  P    
Sbjct: 102 ERGVVLVLQEQ---VLFESGEAEIIDRNSGFLDKVGSLLVGMPNLVKVEGHTDNRPIATY 158

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
               NW LS  RA S  + L  +GV   R   + G+   R  + +D       NRR++++
Sbjct: 159 RYPSNWELSAARASSVIRYLAGTGVDSKRFIAV-GYGDTRPLVPNDSAENLEKNRRVEVI 217

Query: 338 VEDRQ 342
           + D +
Sbjct: 218 ISDPR 222



 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 37/85 (43%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
            + ++D +T+++ FF++++ ++  D    KA+ + F          S   F+  +  +++
Sbjct: 1   MVTFSDLVTLILVFFILLFSMSQIDIVKFKAVSESFQDKQFMDFYPSIIPFENPSENDKN 60

Query: 94  SQNKIDLSIDEHITKNSVDLKIGST 118
             N+   S  +   +    L+    
Sbjct: 61  VVNQGPDSDRQEEERLENLLQEVEG 85


>gi|254504256|ref|ZP_05116407.1| OmpA family protein [Labrenzia alexandrii DFL-11]
 gi|222440327|gb|EEE47006.1| OmpA family protein [Labrenzia alexandrii DFL-11]
          Length = 471

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 3/277 (1%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           + +           +           ++             +++       +        
Sbjct: 191 EAYRDPFDPQFWQFRPGRGVDGAAAETAGLPTRPGSGNGAGQSADQADGDKSWNAPFETD 250

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
               +    +         + + D            +   +++ +         E     
Sbjct: 251 GSTELAQTKSGTGPTSETGTTSGDGPSEFTGTSKNQIVAHVSRRDQETSLAAEAEGGATE 310

Query: 187 KRKKRLQDLAKKISSTLSGLVA---DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                   L  ++++ L        +N    +       G LIS+ D +N  MF   S+ 
Sbjct: 311 AETVPGALLVAELTTVLDAAEGTLLENTAAQITVVRQDDGALISLTDDQNFGMFAIGSAE 370

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P PE + +L+++G+V++ +   I I GHTDA PF++   DNWRLS  RA+ A  +L + G
Sbjct: 371 PRPELVSLLERLGKVISKTGAQIVITGHTDARPFKSKTYDNWRLSSARAHMALYMLSRGG 430

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           V  DR  +I G A   LK A DP  ++NRR++I + +
Sbjct: 431 VGADRFVRIEGAADRHLKNAEDPFAASNRRVEIYLLE 467



 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 9/203 (4%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
           ++ +I++++   DD     G WKI YADFMT LMAFFLVMW+IN TD+  ++ + QYFNP
Sbjct: 3   NEIVIVRRRHNWDDDEKPHGVWKIAYADFMTALMAFFLVMWLINVTDESVRRGVAQYFNP 62

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   ++            +   ++   +E+ TK       G+  Q+   +R     
Sbjct: 63  VKLASTAPNRKGL---------NDPIVNGDTNENGTKLFTGKLGGTDEQESTLERSGEAD 113

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                   S   +      ++        +  E  +  +    L  L+++  +A   +  
Sbjct: 114 VETEGVNASGAAEMKAAAGAQAASGEFTQSHPESILFTDPYAVLDTLAQKINVARTMESN 173

Query: 192 LQDLAKKISSTLSGLVADNIVKG 214
            + +   +      L  +     
Sbjct: 174 PEGIGSGLEKEQGALGGEAYRDP 196


>gi|163742566|ref|ZP_02149952.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10]
 gi|161384151|gb|EDQ08534.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10]
          Length = 278

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 58/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFF++MW++NAT +  +K +  YF+P       +  G         
Sbjct: 27  AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGG------NGA 80

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            +  +     I       + D+      Q K    +E +    +  +Q    +  L    
Sbjct: 81  FNGDSMFTEEIKPQNGTGASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRG 140

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            +     +      +   +E   +     E+    K                        
Sbjct: 141 GESMVSIEMAQHIITRVTDEGLVVELFDTEESPLFKE----------------------- 177

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                                        ++ P      +++ +  V       I+I GH
Sbjct: 178 ----------------------------GTAEPTLLFRDIVKMVSRVTGVVENNIAIGGH 209

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
             +          W LS  RA +   +L   G    R+ +++G A  +L  ++ PM++ N
Sbjct: 210 IRSHAVVVANNPVWELSHARADATRVMLESGGTKSKRMHRVTGHADRKLTDSN-PMSARN 268

Query: 332 RRIDILVEDR 341
            R++I++  +
Sbjct: 269 NRVEIILLRK 278


>gi|77164352|ref|YP_342877.1| flagellar motor protein MotB [Nitrosococcus oceani ATCC 19707]
 gi|254433318|ref|ZP_05046826.1| OmpA family protein [Nitrosococcus oceani AFC27]
 gi|76882666|gb|ABA57347.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|207089651|gb|EDZ66922.1| OmpA family protein [Nitrosococcus oceani AFC27]
          Length = 280

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 80/305 (26%), Gaps = 71/305 (23%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
             +      +W I  AD M++LM+FF+++   +  D    K +               K 
Sbjct: 12  SQEERTGAPAWVITLADLMSLLMSFFVLLLSFSEMDVLKYKQVAGSM-----------KF 60

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q   +     K    I +                                      
Sbjct: 61  AFGVQREIKVKEPPKGTSIIAQ-------------------------------------- 82

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                    E      + T   +      +     L          +  + +L  K+   
Sbjct: 83  ---------EFSPGRPRPTPWNEIRQDTIDETKQTLDFSDAPTQDTEAEVAELQDKLQHE 133

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   +                        R    F   S+I   E    L KI  +L   
Sbjct: 134 IDEGLITIETIKDRIIIRI----------REKGSFPSGSAIFSQEFKPALDKIRAILKKI 183

Query: 263 TEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
              + + GHTD  P      R NW LS  RA S    L+    +S  R   + G+A  + 
Sbjct: 184 EGKLIVAGHTDNMPIQTTRFRSNWELSTARAVSVVHYLLATHEISPRRFV-LEGYADTQP 242

Query: 321 KIASD 325
              ++
Sbjct: 243 LAPNE 247


>gi|224368748|ref|YP_002602909.1| MotB1 [Desulfobacterium autotrophicum HRM2]
 gi|223691464|gb|ACN14747.1| MotB1 [Desulfobacterium autotrophicum HRM2]
          Length = 269

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 8/214 (3%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +F +S +QQ    +   +  S  G      T   + +         P   +KI  +    
Sbjct: 49  LFAMSTTQQETFKELVESLRSALGVQSVPETGTREGLTMHAVPSEEPTDNQKIDELGGMV 108

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             +++ +  S     ++ + +   V    + TG++I++ D     +F    +I   +   
Sbjct: 109 E-KEIREIASEVREMILFNKLGGLVNVSESETGVVITMSD---LLLFSAGEAILSEKGAD 164

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L K+  VLA     + ++GHTDASP        NW LS  RA +  ++L+ SG+    +
Sbjct: 165 ILNKVTAVLAQLAYHVKVKGHTDASPISTGRYPSNWELSASRAAAVVKLLVASGLDPS-L 223

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
               G+A +R    +D     + NRR++I+ E  
Sbjct: 224 ISAEGYAQYRPVATNDTEKGRARNRRVEIVYERD 257



 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W   +AD +T+LM FF++++ ++ T  +T K + +              G  +    
Sbjct: 28  SPEWMATFADLVTLLMCFFVLLFAMSTTQQETFKELVESLRSALGVQSVPETGTREGLTM 87

Query: 90  PERSSQNKIDLSIDEHI 106
               S+   D    + +
Sbjct: 88  HAVPSEEPTDNQKIDEL 104


>gi|78485775|ref|YP_391700.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78364061|gb|ABB42026.1| Flagellar motor protein MotB [Thiomicrospira crunogena XCL-2]
          Length = 296

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 4/224 (1%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                     +               +   S++      S              +     
Sbjct: 46  SGVNDEEMKAMAEYFRDPTVIEASPQVLVPSKEAGQSSDSMIDMGGFKDTPKGSIENEDG 105

Query: 181 EKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           E     + K +++DL ++I   +    + + +   +  E T  G+ + ++D R  PMF  
Sbjct: 106 EAKA--QEKAQMEDLKRQIEQKISENPITNELKNQLKIEVTPNGLQVQVLDDRKRPMFGS 163

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQV 298
              +P      +L+++G VLA +   ISI GHTD+S + + A   NW LS DRA +A ++
Sbjct: 164 GVDLPKDYAAKLLKEVGSVLAQTNNRISIAGHTDSSGYHSNAEYTNWELSADRANAARRL 223

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L+  GV E +I+++ G +        +P N  NRRI I+V +++
Sbjct: 224 LLDGGVGEKKIAQVVGLSDTVPFDKENPYNPRNRRISIIVLNKE 267


>gi|258510423|ref|YP_003183857.1| OmpA/MotB domain-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477149|gb|ACV57468.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 271

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ST  K ++  L  +++   +  Q        T   E G         +   N        
Sbjct: 38  STIDKTRFATLAESLYQALHPGQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNAT 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             +++    +   K+L  L ++I   ++     ++   V       G+ I++ D     +
Sbjct: 98  TQNQQSNEDLTDAKQLDLLYREIQQYIASH---HLSGEVQVIDEARGVQITMRD---VAL 151

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           F+   ++ LP+   +++ +       +  I + G+TD  P        NW LS  RA S 
Sbjct: 152 FNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDTQPINTPIYPSNWELSAARAMSV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L   G++  R+    G+  +    ++        NRR++I++  +
Sbjct: 212 VRFLADHGINPTRL-AGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258



 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++       N+   W + Y+D +T+L+ FF+VM+ ++  D      + +           
Sbjct: 3   RRKKPKHKQNH-ERWLVTYSDLITLLLVFFVVMFAMSTIDKTRFATLAESLYQAL---HP 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             +   +        S ++ +        +N  +    +T  ++  + L +
Sbjct: 59  GQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNATTQNQQSNEDLTD 109


>gi|218290401|ref|ZP_03494531.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218239529|gb|EED06723.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 271

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ST  K ++  L  +++   +  Q        T   E G         +   N        
Sbjct: 38  STIDKTRFATLAESLYQALHPGQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNAT 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             +++    +   K+L  L ++I   ++     ++   V       G+ I++ D     +
Sbjct: 98  TQNQQSNEDLTDAKQLDLLYREIQQYIASH---HLSGEVQVIDEARGVQITMRD---VAL 151

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           F+   ++ LP+   +++ +       +  I + G+TD  P        NW LS  RA S 
Sbjct: 152 FNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDTQPINTPIYPSNWELSAARAMSV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L   G++  R+    G+  +    ++        NRR++I++  +
Sbjct: 212 VRFLADHGINPTRL-AGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258



 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++       N+   W + Y+D +T+L+ FF+VM+ ++  D      + +           
Sbjct: 3   RRKKPKHKQNH-ERWLVTYSDLITLLLVFFVVMFAMSTIDKTRFATLAESLYQAL---HP 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             +   +        S ++ +        +N  +    +T  ++  + L +
Sbjct: 59  GQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNATTQNQQSNEDLTD 109


>gi|87120689|ref|ZP_01076582.1| flagellar motor protein [Marinomonas sp. MED121]
 gi|86163917|gb|EAQ65189.1| flagellar motor protein [Marinomonas sp. MED121]
          Length = 292

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 100/287 (34%), Gaps = 40/287 (13%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
            D    K +                  F  Q   E  S       I +  +    +    
Sbjct: 1   MDVLKFKQLAGSMREA-----------FGVQKQIEAKSIPTGTSIIAQEFSPGKPEPTPI 49

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +  ++K  +R EN +  L    + +  +        +      + D              
Sbjct: 50  NEVRQKVDERPENTLEVLCKPGEDDLNEKEGVGAQGEAYVDKSTAD-------------- 95

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                    ++R+K+++   +      S L  +     V  ET    I I + ++     
Sbjct: 96  ---------LEREKQVKQTEEDAKQISSVLREEISKGTVEVETQERTITIRLKEK---GS 143

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSA 295
           F+  S+    + I ++  I +VL      I++ GHTD  P        NW+LS  RA S 
Sbjct: 144 FESGSAELNFDFIPIIDMIRDVLIGIQGTIAVEGHTDNIPVNSGRFGSNWQLSSARAISV 203

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + L  +G  E +   ++G+A  R    +D     ++NRR++++++ 
Sbjct: 204 AEELFATGQLEQKRFSVTGYADTRPLAPNDTFFNRASNRRVELIIKQ 250


>gi|20807043|ref|NP_622214.1| flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
 gi|254479612|ref|ZP_05092920.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
 gi|20515530|gb|AAM23818.1| Flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
 gi|214034455|gb|EEB75221.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 237

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +   +L +  +   + +   N+   V       G+++S+ D     +FD  S+   PE 
Sbjct: 75  AENKDNLGEVQAQLQAFIKESNLQGMVSTYRDERGLVVSLQDTL---LFDLGSADVHPEE 131

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSE 306
             VL KIG++L +    I + G TD  P  N     NW LS+ RA +  ++L+   G+  
Sbjct: 132 KEVLIKIGKMLKNLPNYIRVEGFTDDLPIHNQKFDSNWELSVIRATTVVKILVNEVGIEP 191

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            RIS + G+  +R  + +D       NRR+DI++ + +
Sbjct: 192 QRISAV-GYGEYRPIVPNDSEEHRRLNRRVDIVIMNTE 228



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 41/121 (33%), Gaps = 5/121 (4%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   D++  N   W + Y+D +T+L+ FF+VM+ ++  +      +    +         
Sbjct: 2   RRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTMSTLNAAKFAQLAGSLSKTF-----T 56

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  +   +       +   +    +  +   I  +N +       +    + + Q 
Sbjct: 57  GTNYILGKYSGKSVVPGNAENKDNLGEVQAQLQAFIKESNLQGMVSTYRDERGLVVSLQD 116

Query: 140 S 140
           +
Sbjct: 117 T 117


>gi|146305660|ref|YP_001186125.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
 gi|145573861|gb|ABP83393.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 329

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 126/334 (37%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI +ADF                             
Sbjct: 2   ENNQPIIVKRVKKNA-GGHHGGAWKIAFADF-------------------------ATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   +   S    +++       Q+ I  +     + +   + +G +      + L  
Sbjct: 36  MAFFLVMWLMSSATPEQKKAISGYFQDPIGFTE----SASPHAIDLGGSPTPAPDRTLNP 91

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I  L+ S+  +                                      +     ++R+
Sbjct: 92  EIQDLTESRDVD--------------------------------IDADQVESLADKLERE 119

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L +  +              +LFE T+ G+ I I+D  N PMF   S+   P   
Sbjct: 120 RLELVLQELQNKVEENPELQRFKDQILFEITQDGLRIQIVDAENRPMFALGSANLQPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA PF       NW LS +RA +A + L+  G ++++
Sbjct: 180 DILLAMADTIRAVPNKISISGHTDAKPFVGRGDFGNWELSANRANAARRALIAGGYADEQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L   +DP N  NRRIDI+V  ++
Sbjct: 240 VARVVGYASSALFDRNDPFNPVNRRIDIVVLTKK 273


>gi|326389648|ref|ZP_08211214.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325994363|gb|EGD52789.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 237

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I   L+G + +N +   V       G++IS+ D     +FD  S+   PE   VL KIG 
Sbjct: 84  IEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSL---LFDLGSADVHPEEKDVLIKIGN 140

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +L      I + G TD  P  N     NW LS+ RA +  ++L+   G+   RIS + G+
Sbjct: 141 MLKTLPNHIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAV-GY 199

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +R  + +D       NRR+DI++ + +
Sbjct: 200 GEYRPVVPNDSEEHRRLNRRVDIVIMNTE 228



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   D++  N   W + Y+D +T+L+ FF+VM+ I+  +      I    +       T 
Sbjct: 2   KRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTISTINATKFAQIASSLSKTF----TG 57

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +  +  + +       N  D +    I K 
Sbjct: 58  TDYVIGQYSGSSFVQGNSGDKNSLGEIEKQ 87


>gi|307265590|ref|ZP_07547144.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919388|gb|EFN49608.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 237

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I   L+G + +N +   V       G++IS+ D     +FD  S+   PE   VL KIG 
Sbjct: 84  IEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSL---LFDLGSADVHPEEKDVLIKIGN 140

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +L      I + G TD  P  N     NW LS+ RA +  ++L+   G+   RIS + G+
Sbjct: 141 MLKTLPNHIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAV-GY 199

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +R  + +D       NRR+DI++ + +
Sbjct: 200 GEYRPVVPNDSEEHRRLNRRVDIVIMNTE 228



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   D++  N   W + Y+D +T+L+ FF+VM+ I+  +      I    +       T 
Sbjct: 2   KRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTISTINATKFAQIASSLSKTF----TG 57

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +  +  + +       N  D +    I K 
Sbjct: 58  TDYVIGQYSGSSFVQGNSGDKNSLGEIEKQ 87


>gi|262172094|ref|ZP_06039772.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
 gi|261893170|gb|EEY39156.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
          Length = 279

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 96/288 (33%), Gaps = 31/288 (10%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
            D    K I               K  F  QN  E     K    I +       +    
Sbjct: 1   MDVLKFKQIAGSM-----------KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPI 49

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
               ++     +  + +              +          K T  + + +  ++    
Sbjct: 50  DVIMQQTIDITQQTLDFQEGDSDRAGGNQRDSG---------KLTGGQSAESSTQDNQNT 100

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               ++  A    ++++ +A+ I   LS  +       +  E     I I I ++     
Sbjct: 101 QSEMQQQQAKAMSEQMETVAESIKKALSREIEQGA---IEVENLGQQIDIRIREK---GA 154

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           F + S+   P+   ++++I +++      + + GHTD     +   R NW LS  RA S 
Sbjct: 155 FPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSV 214

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            Q + K  G    R+ ++ G A  +    +D     + NRR++I +  
Sbjct: 215 AQEMEKVKGFDHQRL-QVRGMADTQPIGPNDTEAQRALNRRVEISILQ 261


>gi|83642951|ref|YP_431386.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
 gi|83630994|gb|ABC26961.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
          Length = 275

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 118/332 (35%), Gaps = 66/332 (19%)

Query: 16  IIK-KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           +IK +K +    P    +W + +AD MT+L+ FF+++   ++ D +  ++I    +    
Sbjct: 1   MIKPRKQSGGLLPVGAPAWIVTFADLMTLLLTFFILLLSFSSLDAEKYRSIAYSMSKAFG 60

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                S                                             +   +++ L
Sbjct: 61  VAWVPS--------------------------------------------SQGAPDMYPL 76

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                       + RD    +     +++E S++  +             A     RL  
Sbjct: 77  GGDITPTVPMEPVIRDKGDAEQPAPQSNVEPSLDLSQEVVSE-------AAYMENDRLAS 129

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                   +S L  +   + V  +    G+++S  ++     F   S       + VL K
Sbjct: 130 ------RMISLLENEIEDQAVDIKFDDKGVVLSFTERAT---FASGSEELKLYMLPVLMK 180

Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKI 312
           + +VLA     I + GHTD  P  +   R NW LS  RA S    L+  G +   R+S I
Sbjct: 181 VTDVLADCKGDILVTGHTDDRPIDSVKFRSNWDLSAARAVSVVHRLVLDGRLDASRVSAI 240

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            G A  R  + +D     + NRR++I +E+ +
Sbjct: 241 -GQAETRPLVPNDTDEHRAQNRRVEIHIENAE 271


>gi|304321119|ref|YP_003854762.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503]
 gi|303300021|gb|ADM09620.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503]
          Length = 254

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 1/205 (0%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            +Q +   +                D     +      L   +     +  + +  + + 
Sbjct: 51  EEQRKGIADYFAPTLPVSPVSGGGKDALNGDSVLTEDTLSRSALYPADSTPKSREAKAIE 110

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +         D+  + V    T  GI++ +ID     +F   SS P PE  V+++   
Sbjct: 111 SSVKEMAKASGLDDADERVRVTVTDEGIVVQLIDAEGKSLFPVGSSTPSPELRVLVKAAA 170

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
             +A   + I I GHTD+  ++  A  N+ LS DRA +A ++L+++GV + R+++I+G A
Sbjct: 171 SAVAAGGKKIRIVGHTDSRQYQGYAYSNFELSADRANAARRLLIEAGVDDSRLTEITGRA 230

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
                  + P + ANRRI I++ DR
Sbjct: 231 DREPITDN-PADPANRRIAIVLLDR 254



 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            ++   IIK+K       ++ G WK+ YADF+T +MAFFL+MW++NAT ++ +K I  YF
Sbjct: 2   SDNNPTIIKRKRITVVNGHHGGQWKVAYADFVTAMMAFFLLMWLLNATTEEQRKGIADYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI-DEHITKNSVDLKIGSTNQKKQYQRLE 128
            P       +  G          +       ++     T  S + K   ++ K+  +   
Sbjct: 62  APTLPVSPVSGGGKDALNGDSVLTEDTLSRSALYPADSTPKSREAKAIESSVKEMAKASG 121

Query: 129 NNIFY 133
            +   
Sbjct: 122 LDDAD 126


>gi|261856274|ref|YP_003263557.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261836743|gb|ACX96510.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 323

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 100/310 (32%), Gaps = 69/310 (22%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W +   D MT+L+  F+++           ++ +        +  T      D+   P+ 
Sbjct: 55  WLLTMVDLMTLLLTMFVLLAAYA------YQSKDNTVTMVASSGSTQQAQKVDKTPTPQT 108

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                   S  E  T+ ++                                         
Sbjct: 109 GPMPTTQTSPGETPTQGNIP---------------------------------------- 128

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                  +  + K+     ++  P            + + + L               + 
Sbjct: 129 ----QAGNALIGKAGETVLDHAKPSAQSSSANDKASQDQARAL------------FAGLG 172

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V     +  I + + D     +F   +S      + +L+++ + L      I+++GHT
Sbjct: 173 KDVDVSVVKGRINLRVKDN---ILFSSGNSALSAAGMQLLKRLADRLKAGDYPIAVQGHT 229

Query: 273 DASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           D  P        NW LS  RA +  Q L+ SGV  +R+S I GFA      ++D     +
Sbjct: 230 DNVPIHTLQFPSNWELSAARAAAVVQELIASGVQPNRLSAI-GFADTHPITSNDTASGRA 288

Query: 330 ANRRIDILVE 339
            NRR+D+ ++
Sbjct: 289 ENRRVDLELQ 298


>gi|39996116|ref|NP_952067.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
 gi|39982881|gb|AAR34340.1| chemotaxis MotB protein, putative [Geobacter sulfurreducens PCA]
          Length = 289

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 95/258 (36%), Gaps = 11/258 (4%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E +     +L+  +           G      + +     +        +++ +      
Sbjct: 33  EEADNLSKELTTLQEKYSALSSENEGLKGALAKLKDEAAGLAQDKEKLTADNRELQQVLQ 92

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++         +L + +++ E       +        +++++++++K     L  +  + 
Sbjct: 93  AKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEQVREVSKTYEDLLDKMKGEI 152

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIR 269
               V     +  + ++++D     +FD   +   P  + +LQK+ E+L    +  I I 
Sbjct: 153 AQGQVTISELKGKLTVNMVDA---ILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIE 209

Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           GHTD              NW LS  RA +  + L   G+    +S ++ +  +     +D
Sbjct: 210 GHTDNVQIVGNLAKRFPTNWELSSARAINVTRFLQSRGIDPAVLSAVA-YGEYHPVAPND 268

Query: 326 PMN--SANRRIDILVEDR 341
                + NRRI+I++  +
Sbjct: 269 TDEGKAKNRRIEIILVPK 286


>gi|163738038|ref|ZP_02145454.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|161388654|gb|EDQ13007.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 278

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 58/310 (18%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFF++MW++NAT +  +K +  YF+P       +  G         
Sbjct: 27  AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGG------NGA 80

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            +  +     I       + D+      Q K    +E +    +  +Q    +  L    
Sbjct: 81  FNGDSMFTEEIKPQNGTGASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRG 140

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            +     +      +   +E   +     E+    K                        
Sbjct: 141 GESMVSIEMAQHIITRVTDEGLVVELFDTEESPLFKE----------------------- 177

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                                        ++ P      +++ +  V       I+I GH
Sbjct: 178 ----------------------------GTAEPTLLFRDIVKMVSRVTGVVENNIAIGGH 209

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
             +          W LS  RA +   +L   G    R+ +++G A  +L  ++ PM++ N
Sbjct: 210 IRSHAVVVANNPVWELSHARADATRVMLESGGTRSKRMHRVTGHADRKLTDSN-PMSARN 268

Query: 332 RRIDILVEDR 341
            R++I++  +
Sbjct: 269 NRVEIILLRK 278


>gi|328545495|ref|YP_004305604.1| flagellar motor protein MotB [polymorphum gilvum SL003B-26A1]
 gi|326415236|gb|ADZ72299.1| Flagellar motor protein MotB [Polymorphum gilvum SL003B-26A1]
          Length = 434

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 15/271 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                    ++G    + P E  +         E + +   +    S + +   +    +
Sbjct: 177 DPLYWQFLPNRGAGAAERPIEL-AMEPARTEAAEGMPEPRPEASPESRSAEGVGKPAPPS 235

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
               S +       +    D+              +    E   L   +      ++   
Sbjct: 236 PLVASVAPSPSAKPDPNAADAVASGVSAPQAPSAAAPASPEASDLAKTAAALQADLQG-- 293

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
                       L+          +  E T  G+LIS+ D ++  MF   S+ P PE + 
Sbjct: 294 ------------LAETPLGAAASRITVERTGAGLLISLTDDQDFGMFAVGSAEPRPELVR 341

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           ++++IG  L+     I IRGHTDA PFR+   DNWRLS  RA+ A  +L + GV   R+ 
Sbjct: 342 LMERIGSTLSARPGRIVIRGHTDARPFRSKTYDNWRLSSARAHMALYMLARGGVDAGRVE 401

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +I G+A   LK  SDP ++ NRRI+I + + 
Sbjct: 402 RIEGYADRDLKRPSDPYSAVNRRIEIFLLEP 432



 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 85/208 (40%), Gaps = 8/208 (3%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            + + +I++++ A D   +  G WKI +ADFMT +MAFFLVMW+IN TD++ ++ + QYF
Sbjct: 6   SSGEIVIVRRRPAWDADHHKGGVWKIAFADFMTAMMAFFLVMWLINVTDENVRQGVAQYF 65

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK------Q 123
           NP      + ++   ++      +   + D    +  ++N        +   +      +
Sbjct: 66  NPVKLAATSPTRKGLNDAGESGDAIGEESDRPPAQGGSENKPAGPARHSTGGEYRQFYSE 125

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK--E 181
                +    L    +S     +     EK     +  +  +  +   + F P   +   
Sbjct: 126 AALFSDPYAVLDTLARSITLPEAEGPAPEKAGFGTREGEGAQGGDAYRDPFDPLYWQFLP 185

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD 209
              A   ++ ++   +   +  +  + +
Sbjct: 186 NRGAGAAERPIELAMEPARTEAAEGMPE 213


>gi|182679602|ref|YP_001833748.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182635485|gb|ACB96259.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 416

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 3/263 (1%)

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
             D Q           D+  D              T+         + +     S  +  
Sbjct: 153 ASDLQASDAEVENKGADVYRDPFAPLMPAPFASDETDPADVKTTGMSGVTVDHASANAAP 212

Query: 143 CKNSLTRDSEK---GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
             ++ +         K   +  + +K   +            K  + +    L  +  ++
Sbjct: 213 VHSASSSSVTSERLNKMNGRGGEEKKGQLQNGETSSQLSVTPKEDSKELVAELNRIKSEL 272

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +S    + A      +  E+T  G+L+++ D     MF   SS P  +T+ +++K+  +L
Sbjct: 273 NSVQKKISAAPSTPIIEVESTSEGVLLNLTDDVTYSMFAVGSSEPQKQTVQIMEKVAGIL 332

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              T  + IRG+TD  P+++   DNWRLS  RA  A  +L++ G+   R+  I G+A   
Sbjct: 333 KSHTGNVIIRGYTDGRPYKDGVYDNWRLSTSRALMAQYMLIRGGLDPKRVEHIEGYADRH 392

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
           LK + DP  S NRRI+ILV   +
Sbjct: 393 LKNSEDPNASVNRRIEILVRKEK 415



 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 6/193 (3%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +++ +IIK++V   +  ++ G+WKI +ADFMT LMA FLV+W+IN+ ++ TK +I +Y
Sbjct: 3   ENHNEIVIIKRRV-SHEGGHHGGAWKIAFADFMTALMALFLVLWLINSANEKTKTSIARY 61

Query: 69  FNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           FNP    ++    KG  +      ++ + K   S +    KN           +    +L
Sbjct: 62  FNPIKLVDMTPMQKGFRNPSEKEVKAGEAKTKSSTEAEKEKNEGSSPDKPDTAQLPQSKL 121

Query: 128 ----ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
               E+ +F    +  +E    +L    +      +++D E      + Y  P       
Sbjct: 122 AKYSEDVLFRDPYAVLAEIADKTLNPPLKAPASDLQASDAEVENKGADVYRDPFAPLMPA 181

Query: 184 LAMKRKKRLQDLA 196
                +    D+ 
Sbjct: 182 PFASDETDPADVK 194


>gi|325290746|ref|YP_004266927.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324966147|gb|ADY56926.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 273

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 106/327 (32%), Gaps = 74/327 (22%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    + P N   W I Y+D +T L+  F V              +    +    +   A
Sbjct: 3   RKKHSEAPENHERWLITYSDLIT-LLMIFFV--------------VMYSMSKVDNDKFRA 47

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                +          +    S  + + +              Q      +    S+ Q 
Sbjct: 48  MADALNMTLGGSPGRISIAQTSGGDSLIETGGP----------QNNPQSASTDPESSGQL 97

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            ++   ++  ++    D+    D     N  E+  +    +                   
Sbjct: 98  QKNNSGNVDMETMTILDIKAKLDQFSKANGIESKLISSTEER------------------ 139

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                                  G+++SI D     +F   S+   P  + +LQKI  VL
Sbjct: 140 -----------------------GLVVSIQDTL---LFQPGSAEISPNALDILQKISSVL 173

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAH 317
           A S   I + GHT   P        NW LS+ RA +   +L +SG ++  R+S  +G+  
Sbjct: 174 AASQNYIKVEGHTCTLPIHTSQYRSNWELSVIRATNVVHILAESGQINSKRLSA-TGYGE 232

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
            R   ++D       NRR+D+++   +
Sbjct: 233 FRPIASNDTDEGRIKNRRVDLIILRSK 259


>gi|254473486|ref|ZP_05086883.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
 gi|211957602|gb|EEA92805.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
          Length = 573

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 3/283 (1%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +A  +       +          E    ++ +Q + D + ++ +    V  ++       
Sbjct: 290 EASAESSVIVIGDAPDGEGEKLAEGEILKQLAQTQADEAGEDAVMTRLVFAEVKKGEAAA 349

Query: 123 QYQRLENNIFYLSNSQQ---SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           +    +         +              +          TD E               
Sbjct: 350 KVDEKDVPELVEETEEALKIEIVEAEPTPAEPVSEPIEVAQTDPETLPMVPAAKPTEAAQ 409

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +    +  +  + L    +S  + L        + F  +R G+LI I+D  +  MF  
Sbjct: 410 GAESGDDEDDEGDKQLVSIANSVGAALDGLKTGASIEFTHSRDGVLIRIMDNDDFGMFAV 469

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            SS P P+ +  ++KI +VL      I IRGHTDA PF++   DNWRLS  RA+ AY +L
Sbjct: 470 GSSEPHPDVVKAMEKIAKVLEEENGEIVIRGHTDARPFKSKRNDNWRLSTARAHMAYFML 529

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ G+ E+RI  I G+A  RLK   +P    NRRI+I++   Q
Sbjct: 530 VRGGLDENRIVGIEGYADRRLKDVEEPYAPQNRRIEIMLMKGQ 572



 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
            + II++++ +   T    G WKI YADF T +MAFFL+MW++NA+D+ +++ I  YFNP
Sbjct: 6   QELIIVRRRNSDMITTPKSGVWKIAYADFATAMMAFFLLMWLVNASDEASQRGIASYFNP 65

Query: 72  FG-KNLMTASKGIFDEQNPPERSSQNKI---DLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
               +   + KGI D +  P  +  ++       I    T+       G  ++ +     
Sbjct: 66  IKLVDSTASPKGIRDPEETPSPTDSDEGVDNGKPIGAGGTEKQGPTSGGGADKAEPISDR 125

Query: 128 ENNIFYLSNSQQSEHCKNSLT 148
           +           +E      T
Sbjct: 126 DTGENSTFAGANAEDGGVKAT 146


>gi|78043824|ref|YP_359811.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995939|gb|ABB14838.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 8/209 (3%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +E    +L        +         +   + N       +   +  K  K   +LA 
Sbjct: 47  ALAESLSKALGGGGIVLTNAGPDVVTGSNATVQGNLGKASQEQLPAVDEKDLKETANLAL 106

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             +   S + A  +   V       G++IS  D     +F   S+   P+   ++++IGE
Sbjct: 107 IKAKVDSYIKAKGLNASVTATLEERGVVISFKDA---ILFKLGSAELTPQAKAIVRQIGE 163

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +L      I I GHTD  P        NW LS  RA S    L+        R+S + G+
Sbjct: 164 ILLPLPNYIRIEGHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAV-GY 222

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342
             +R K+ +        NRR+DI++   +
Sbjct: 223 GEYRPKVPNTSEQNRQKNRRVDIVILRSK 251


>gi|222149694|ref|YP_002550651.1| hypothetical protein Avi_3670 [Agrobacterium vitis S4]
 gi|221736676|gb|ACM37639.1| flagellar motor protein [Agrobacterium vitis S4]
          Length = 343

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 105/340 (30%), Gaps = 18/340 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLM---AFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    D   +    +    +  +  +M     F+V   + + +   K  +    N     
Sbjct: 5   RNRKRDRGADYWPGFVDALSTLLIAIMFLLTVFVVAQFVLSREISGKDEVLNRLNNQIAE 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L          +   E +  N           ++ +   + +        +++       
Sbjct: 65  LTQMLALEKGGKQDLEDALANLQSSLDTSEKERSRLQSLLDTGAGNSAQAQVKIGELSGK 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             +Q +    ++++     + +        ++ +            +       +RL   
Sbjct: 125 LDEQQQVSARAMSQIDLLNQQIAALRAQIAAVEQALQASEAKDQNSQAKIADLGRRLNVA 184

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +    L+   +D   +     + R  I I       ++  +F    +   P+    + 
Sbjct: 185 LAQKVQELNRYRSDFFGRLREILSDRQNIRIVGDRFVFQSEVLFPSGGADMNPQGQEEMV 244

Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSG 303
           K+   L             V+ + GHTD           DNW LS  RA S  + L+  G
Sbjct: 245 KLANALIDLAKEIPPDINWVLRVDGHTDNVQLSGNGRYPDNWALSAARAVSVVKFLISKG 304

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           V  DR+   +GF   +     D     + NRRI++ + +R
Sbjct: 305 VPADRL-AAAGFGEFQPIAPGDTPEARAQNRRIELKLTER 343


>gi|118589971|ref|ZP_01547375.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
 gi|118437468|gb|EAV44105.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
          Length = 500

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G F    P +  +Q++  ++            K G    +K        +   +     
Sbjct: 235 AGDFAYAAPFDEGTQSETGIAQQNGNAAPGKGAKKGDYMAEKAGTTSFEFVGTGTLPDNG 294

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E     +     K  +      + +S  +          +        +   + L  ++S
Sbjct: 295 ETTDPVVAHVLGKSLEQSSGEVVFESETETVVGTGAGEGEGTYEEDFTESSAEVLVARLS 354

Query: 201 STLSGL---VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             L+     V +     +       G LIS+ D +N  MF   S+ P PE + +L++IG+
Sbjct: 355 EVLAQTEGTVLEETASQITVTREGEGALISLTDDQNFGMFAIGSAEPRPELVKLLERIGK 414

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           ++A +   I I+GHTDA PFR+   DNWRLS  RA+ A  +L + GV +DR +++ G+A 
Sbjct: 415 IVADTPGQIVIKGHTDARPFRSKTYDNWRLSSARAHMALYMLSRGGVGKDRFNRVEGYAD 474

Query: 318 HRLKIASDPMNSANRRIDILVED 340
             LK+ SDP  ++NRRI+I + +
Sbjct: 475 KDLKVPSDPFAASNRRIEIYLLE 497



 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 1/138 (0%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
           ++ +I+++K + +D     G WKI YADFMT LMAFFLVMW+IN TDD  ++ + QYFNP
Sbjct: 7   NEIVIVRRKNSWEDDQTPHGVWKIAYADFMTALMAFFLVMWLINVTDDSVRRGVAQYFNP 66

Query: 72  FGKNLM-TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                     KG+ D +   E +       +     +   VD      +   +  +LE  
Sbjct: 67  VKLASTAPNRKGLNDPEINGETNEAGTKLFTGKLGGSDAPVDQDENFGDGLDEGHKLEEV 126

Query: 131 IFYLSNSQQSEHCKNSLT 148
           I            + + T
Sbjct: 127 IETPEMGGAPASGQFTQT 144


>gi|170723854|ref|YP_001751542.1| flagellar motor protein MotB [Pseudomonas putida W619]
 gi|169761857|gb|ACA75173.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 339

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/334 (21%), Positives = 115/334 (34%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI +ADF                             
Sbjct: 2   ENNQPIIIKRVKRYG-GGHHGGAWKIAFADF-------------------------ATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       ++ I  S                            
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFKDPIGFSESGTP----------------------Y 73

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I    + Q +     +    SE   D     D ++     E      L         + 
Sbjct: 74  VIDLGGSPQLAPEKTINPEEKSEPTPDTSIQLDKDQVETMAEQVERERLELLLQELQNKV 133

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    L K     L  +  D              + I I+D  N PMFD  S+   P   
Sbjct: 134 EENPQLQKFKDQILFEITQDG-------------LRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      IS+ GHTDA P+       NW LS +RA +A + L+  G  +D+
Sbjct: 181 DILLAMADTIKAVPNKISVSGHTDAKPYSGSSEFGNWELSANRANAARRALVAGGYPDDQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274


>gi|91776302|ref|YP_546058.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gi|91710289|gb|ABE50217.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 267

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 7/214 (3%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                L+++  S    N+    S    D   + D         +  +  L   ++   ++
Sbjct: 44  QKYKELTSALGSAFSGNTNDNTSSPSPDTPPAADRHVLKTTPTSSLIHALPLSRLQKERQ 103

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +K  + ++  I++    L        +    T  G+ I I D     +F   S+    E 
Sbjct: 104 RKEQESISAMIATLNRALGNLATNGKISISKTSLGVRIDIAD---GVLFQAGSAAIKAEA 160

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
              + +I ++LA     I + GHTD  P  N     NW LS  RA S  + ++++G+   
Sbjct: 161 DAPISEITQILADQQYAIQVEGHTDNVPISNAQFPSNWELSSMRATSVVRKMIENGIDAA 220

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           R+S + G++  +    +      + NRR+ I+V 
Sbjct: 221 RLSAV-GYSDTQPIADNQTAEGRAQNRRVSIMVL 253


>gi|163758837|ref|ZP_02165924.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
 gi|162284127|gb|EDQ34411.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
          Length = 343

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 109/344 (31%), Gaps = 26/344 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71
           +    +   +        + D   T+L+A       F++     + +   +  +    N 
Sbjct: 5   RNRRRERGVDYWPG----FVDALSTLLLAIMFLLTVFVLAQFFLSREISGRDQVLNRLNS 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L          +   E +  N      +    ++ +   + S +        +   
Sbjct: 61  QINELTQLLALERSGKQDLEDTLANLQASLSESETDRSRLQQLLDSGSGATAAAEAQIGA 120

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   + +  + +L +     + +        ++            + +       +R
Sbjct: 121 LSETLDAEKKVSQRALNQVELLNQQISALRSQLAALEDALEVSETKDQETQAKIADLGRR 180

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L     +    L+   +D   +     ++R  + +       ++  +F    +   P   
Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSSREDVRVVGDRFVFQSEVLFPSGGNELNPAGQ 240

Query: 250 VVLQKIGEVLAH--------STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVL 299
             + K+ E +             V+ + GHTD  P        DNW LS  RA S  + L
Sbjct: 241 EQMAKLAEAINELSREIPEEINWVLRVDGHTDNVPLSGTGRYADNWELSTARATSVVKYL 300

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +++GV  +R+    GF   +     D   +   NRRI++ + +R
Sbjct: 301 IENGVPANRLVAA-GFGEFQPIADGDSDEARATNRRIELKLTER 343


>gi|167038133|ref|YP_001665711.1| OmpA/MotB domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039156|ref|YP_001662141.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X514]
 gi|256750878|ref|ZP_05491762.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913254|ref|ZP_07130571.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
 gi|307723732|ref|YP_003903483.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X513]
 gi|320116543|ref|YP_004186702.1| OmpA/MotB domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853396|gb|ABY91805.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X514]
 gi|166856967|gb|ABY95375.1| OmpA/MotB domain protein [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256750213|gb|EEU63233.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889939|gb|EFK85084.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
 gi|307580793|gb|ADN54192.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X513]
 gi|319929634|gb|ADV80319.1| OmpA/MotB domain protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 238

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I   L G + +N +   V       G++IS+ D     +FD  S+   PE   VL KIG+
Sbjct: 85  IEKQLKGFIKENNLQGAVTSYIDERGLVISLQDSL---LFDLGSADVRPEEKEVLIKIGD 141

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +L      I + G TD  P  N     NW LS+ RA +  ++L+   G+   RIS + G+
Sbjct: 142 MLKSLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVNEVGIEPARISAV-GY 200

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +R  + ++   +   NRR+DI++ + +
Sbjct: 201 GEYRPVVPNNSEENRRLNRRVDIVIMNTE 229



 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 4/152 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K++  D++  N   W + Y+D M++L+ FF+V++ I+  +      I    +       T
Sbjct: 2   KRLEEDESKPNHDRWVLTYSDMMSLLLVFFIVLYSISTVNATKFAQIASSLSKTF----T 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +  +  + N       N  D S    I K        +  Q      ++     +S   
Sbjct: 58  GTDYVLFQYNGSSFMDGNSGDKSSLGEIEKQLKGFIKENNLQGAVTSYIDERGLVISLQD 117

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                  S     E+ + L K  D+ KS+   
Sbjct: 118 SLLFDLGSADVRPEEKEVLIKIGDMLKSLPNH 149


>gi|297618036|ref|YP_003703195.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145873|gb|ADI02630.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 258

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +  L+ + K+++  +     + +   ++      G++IS+ D     +F K S +  P  
Sbjct: 96  QGNLEAIEKQLAEYIKSE--EGLAGNIVLMEQERGLVISLKDTL---LFPKGSDVLTPRA 150

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSE 306
             +++K+GE L      + + GHTD  P        NW LS+ RA +   VL    G+  
Sbjct: 151 HEIIRKVGESLKTIPNYVRVEGHTDDLPINTPKFPSNWELSVLRATNVVHVLAGEVGIPP 210

Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           DR+S  +G+  +R  + +D  P  + NRR+DI++  ++
Sbjct: 211 DRLSA-TGYGEYRPLMPNDSEPNRAMNRRVDIVILKQK 247



 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 16  IIKKKVAIDDTPNNLG---SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           + +      +          W + Y+D +T+LM FF+VM+ ++  D    +A+    +  
Sbjct: 1   MARNSKKEQEGGEGGPSMERWLLTYSDLITLLMIFFVVMYTMSQVDAQKFQALANSLSMV 60

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
                 +            RS Q   +   D    + +++
Sbjct: 61  LSGKSISIMETPGPSVVEGRSGQIIREGQGDTPTLQGNLE 100


>gi|289577780|ref|YP_003476407.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
 gi|289527493|gb|ADD01845.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
          Length = 239

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I   L G V +N +   V       G++IS+ D     +FD  S+   PE   VL KIG 
Sbjct: 85  IEKQLEGFVKENNLQGMVTSYIDERGLVISLQDT---ILFDLGSADVHPEEKDVLIKIGN 141

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315
           +L      I + G TD  P  N     NW LS+ RA +  ++L+ ++GV   +IS + G+
Sbjct: 142 MLKTLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAV-GY 200

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +R  + +D       NRR+DI++ + +
Sbjct: 201 GEYRPVVPNDSEEHRRLNRRVDIVIMNAE 229



 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-NPFGKNLM 77
           ++   D++  N G W + Y+D M++L+ FF+V++ I+  +      +       FG +  
Sbjct: 2   RRWEEDESKLNTGRWVLTYSDMMSLLLVFFIVLYSISTLNAAKFAQLSISLSRAFGGSDY 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDE 104
              + + D         +N +     +
Sbjct: 62  VIGQYMGDSFVQGNSGDKNSLGEIEKQ 88


>gi|238563173|ref|ZP_04610426.1| flagellar motor protein [Burkholderia mallei GB8 horse 4]
 gi|251767164|ref|ZP_04819981.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20]
 gi|238521179|gb|EEP84632.1| flagellar motor protein [Burkholderia mallei GB8 horse 4]
 gi|243063600|gb|EES45786.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20]
          Length = 260

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 3/197 (1%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLV 207
           R S   +    +          ++        +  L  + + RL DL  K+ + +     
Sbjct: 13  RASMPARPAAPTARRTWPSASRKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPT 72

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
                + +  ++T  G+ I I+D +  PMF  SS    P    +L++IG+ L      I 
Sbjct: 73  LRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRII 132

Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           ++GHTDA P+        NW LS DRA ++ + L+  G+ E ++ ++ G A  +    +D
Sbjct: 133 VQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQNLNKAD 192

Query: 326 PMNSANRRIDILVEDRQ 342
           P++  NRRI I+V +R+
Sbjct: 193 PLDPENRRISIIVLNRK 209


>gi|222054510|ref|YP_002536872.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221563799|gb|ACM19771.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 287

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 104/270 (38%), Gaps = 13/270 (4%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            +G + ++     S    +     ++   ++ +  + S+  K        N      +  
Sbjct: 24  GEGKYLKKVEEAESLNKSLTSLQQQYDALSAENEILKSSVSKLTKDLAAANKDKEKLAAD 83

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           ++     L   S+           + +  + EN  L         A +    +Q  +K  
Sbjct: 84  NKELDKVLKAKSDTLSKNISELRQKVTDLETENARLKDEIANLKKAKEE--EVQKTSKTY 141

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              L  + ++     V     +  + ++++D     +FD   +   PE ++VLQK+ ++L
Sbjct: 142 EDLLEKMKSEISQGQVTISELKGKLTVNMVDA---VLFDSGKAEIKPEGLIVLQKVIDIL 198

Query: 260 AHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +  +  I I GHTD            + NW LS  RA +  + L + G+    +S I+ 
Sbjct: 199 KNIKDKSIRIEGHTDNDQIGGALAKKYQTNWELSAARAINVTRYLQQQGIDPLNLSAIA- 257

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +   +   A+D     + NRRI+I++  ++
Sbjct: 258 YGEFKPVAANDSREGKAKNRRIEIILVPKE 287


>gi|258513971|ref|YP_003190193.1| OmpA/MotB domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777676|gb|ACV61570.1| OmpA/MotB domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 275

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 8/184 (4%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            E  +       +       I   + +K  + L +        +   N+   +L      
Sbjct: 60  SEHILPGAGPSAIESNPSPPIQVQQIQKEAEQLKELQKELHDLIEKKNLTGHILVSIEER 119

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-A 281
           G+++S +D     +F   S+   P+   ++Q++G++L  S   I I GHTD  P      
Sbjct: 120 GLVVSFLD---PVLFPLGSAQLTPKAKNIVQEVGQILLKSDNYIRIEGHTDDIPINTAIY 176

Query: 282 RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             NW LS  RA S  Q L+K+     +R+   +G+  +R ++ +D M+    NRR+DI+V
Sbjct: 177 PSNWELSAARATSVVQELIKTMSFPPERL-AATGYGEYRPRVPNDSMDHKQMNRRVDIVV 235

Query: 339 EDRQ 342
              +
Sbjct: 236 VRSK 239



 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 2/97 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF--GKNL 76
           +K        N   W I Y+D +T+LM FF++M+ ++   +    A+    +    G   
Sbjct: 3   RKRKGKAEKENGERWLITYSDLITLLMIFFIIMFAMSEISNQKFVAMASSLSIALGGSEH 62

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           +    G    ++ P    Q +      E + +   +L
Sbjct: 63  ILPGAGPSAIESNPSPPIQVQQIQKEAEQLKELQKEL 99


>gi|121600109|ref|YP_994715.1| flagellar motor protein [Burkholderia mallei SAVP1]
 gi|124386114|ref|YP_001027662.1| putative chemotaxis MotB protein [Burkholderia mallei NCTC 10229]
 gi|121228919|gb|ABM51437.1| flagellar motor protein [Burkholderia mallei SAVP1]
          Length = 245

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNI 211
             +    +          ++        +  L  + + RL DL  K+ + +         
Sbjct: 2   PARPAAPTARRTWPSASRKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQF 61

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + +  ++T  G+ I I+D +  PMF  SS    P    +L++IG+ L      I ++GH
Sbjct: 62  KQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGH 121

Query: 272 TDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           TDA P+        NW LS DRA ++ + L+  G+ E ++ ++ G A  +    +DP++ 
Sbjct: 122 TDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDP 181

Query: 330 ANRRIDILVEDRQ 342
            NRRI I+V +R+
Sbjct: 182 ENRRISIIVLNRK 194


>gi|297544067|ref|YP_003676369.1| OmpA/MotB domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841842|gb|ADH60358.1| OmpA/MotB domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 239

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I   L G V +N +   V       G++IS+ D     +FD  S+   PE   VL KIG 
Sbjct: 85  IEKQLEGFVKENNLQGMVTSYIDERGLVISLQDTL---LFDLGSADVHPEEKDVLIKIGN 141

Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315
           +L      I + G TD  P  N     NW LS+ RA +  ++L+ ++GV   +IS + G+
Sbjct: 142 MLKTLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAV-GY 200

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +R  + +D       NRR+DI++ + +
Sbjct: 201 GEYRPVVPNDSEEHRRLNRRVDIVIMNAE 229



 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-NPFGKNLM 77
           ++   D++  N G W + Y+D M++L+ FF+V++ I+  +      +       FG +  
Sbjct: 2   RRWEEDESKLNTGRWVLTYSDMMSLLLVFFIVLYSISTLNAAKFAQLSVSLSRAFGGSDY 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDE 104
              + + D         +N +     +
Sbjct: 62  VIGQYMGDSFVQGNSGDKNSLGEIEKQ 88


>gi|323158625|gb|EFZ44639.1| chemotaxis protein motB [Escherichia coli E128010]
          Length = 275

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+I+ +       I +YF       +T    I + ++P      +    
Sbjct: 1   MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             + +   N  +LK                                              
Sbjct: 61  QGEVNKQPNIEELK---------------------------------------------- 74

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                   + E   L  L  +    ++   +L+ L   +   L   V + +   ++    
Sbjct: 75  -------KRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           R               F   S+   P    +L+ I  VL      IS+ GHTD  P+ + 
Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171

Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                NW LS DRA ++ + LM  G+   ++ ++ G A         P ++ NRRI +LV
Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231

Query: 339 EDRQ 342
            ++Q
Sbjct: 232 LNKQ 235


>gi|169831941|ref|YP_001717923.1| OmpA/MotB domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638785|gb|ACA60291.1| OmpA/MotB domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 257

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 8/183 (4%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
                +   +   P    +  +       L  +A         +    +   +   T   
Sbjct: 69  EAPDASLGPDERFPMELDKGFVKSSDTAFLAQMAPVQKQVQELMEEAGLTAHIEMTTEER 128

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282
           G++ISI D     +F   S+   P    ++ K+G +L  +   I I GHTD  P      
Sbjct: 129 GLVISIQDT---VLFATGSADLTPTAREIMDKLGLILLQTPNYIRIEGHTDNVPINTPRF 185

Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             NW LS  R+ S  + L+ +     +R+S  +G+  +R +  +D       NRR+D +V
Sbjct: 186 PSNWELSAARSTSVVRYLIARHNFPPERLSA-TGYGEYRPRDTNDTAQGRQRNRRVDFVV 244

Query: 339 EDR 341
              
Sbjct: 245 LSS 247



 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
             W + YADF+TVL+ FF+V++ ++  D     A+ +  +     L      + +  +  
Sbjct: 18  ERWVLPYADFVTVLLCFFIVLYSLSTIDAHKFAALARSLH---HALGGQGSVLIEAPDAS 74

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
               +          +  +           +KQ Q L       ++ + +   +  +   
Sbjct: 75  LGPDERFPMELDKGFVKSSDTAFLAQMAPVQKQVQELMEEAGLTAHIEMTTEERGLVISI 134

Query: 151 SEKGKDLCKSTDLEKSINKEENY 173
            +       S DL  +  +  + 
Sbjct: 135 QDTVLFATGSADLTPTAREIMDK 157


>gi|323165315|gb|EFZ51103.1| chemotaxis protein motB [Shigella sonnei 53G]
          Length = 275

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+I+ +       I +YF       +T    I + ++P      +    
Sbjct: 1   MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             + +   N  DLK                                              
Sbjct: 61  QGEVNKQPNIEDLK---------------------------------------------- 74

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                   + E   L  L  +    ++   +L+ L   +   L   V + +   ++    
Sbjct: 75  -------KRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           R               F   S+   P    +L+ I  VL      IS+ GHTD  P+ + 
Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171

Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                NW LS DRA ++ + LM  G+   ++ ++ G A         P ++ NRRI +LV
Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231

Query: 339 EDRQ 342
            ++Q
Sbjct: 232 LNKQ 235


>gi|306820125|ref|ZP_07453773.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551903|gb|EFM39846.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 250

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 11/160 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
               +  K        L  + + K +       G+++   D     +FD+ S+   P++ 
Sbjct: 86  AESNNFEKMEKQIKEYLEENKLEKQISISNEEEGLVLRFQDS---SLFDQGSATLKPQSY 142

Query: 250 VVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGV 304
            VL+ +G +L         +S+ GHTD  P      + NW LS +RA +  + L++  G+
Sbjct: 143 NVLKYVGGILKSKNFKDKFVSVEGHTDNVPISTSTHQSNWELSSNRASNVVRYLIENQGI 202

Query: 305 SEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
              R+S   G+  +     +D     + NRR+DI++   +
Sbjct: 203 DPKRLSTA-GYGEYHPVAPNDTPANMAKNRRVDIMILRTK 241



 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    +       +   Y D MT+L+ FF++++ ++  D    +AI   F      L  
Sbjct: 3   KKNITYEIKMGAPEYMNTYGDMMTLLLCFFVLLFAMSNIDAKKFEAIVMSFQGSLGVLDG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHI 106
            +      +N  E+ S  +   S     
Sbjct: 63  GNT--LSSENKIEKGSVFEGQSSSVAES 88


>gi|313650105|gb|EFS14518.1| chemotaxis protein motB [Shigella flexneri 2a str. 2457T]
 gi|332756040|gb|EGJ86393.1| chemotaxis protein motB [Shigella flexneri 4343-70]
 gi|333017760|gb|EGK37067.1| chemotaxis protein motB [Shigella flexneri K-227]
          Length = 275

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+I+ +       I +YF       +T    I + ++P      +    
Sbjct: 1   MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             + +   N  +LK                                              
Sbjct: 61  QGEVNKQPNIEELK---------------------------------------------- 74

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                   + E   L  L  +    ++   +L+ L   +   L   V + +   ++    
Sbjct: 75  -------KRMEQSRLRKLRGDLDQLIESDPKLRALRLHLKIDL---VQEGLRIQIIDSQN 124

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           R               F   S+   P    +L+ I  VL      IS+ GHTD  P+ + 
Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171

Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                NW LS DRA ++ + LM  G+   ++ ++ G A         P ++ NRRI +LV
Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231

Query: 339 EDRQ 342
            ++Q
Sbjct: 232 LNKQ 235


>gi|222087026|ref|YP_002545561.1| OmpA family protein [Agrobacterium radiobacter K84]
 gi|221724474|gb|ACM27630.1| OmpA family protein [Agrobacterium radiobacter K84]
          Length = 321

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 105/322 (32%), Gaps = 21/322 (6%)

Query: 40  FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
             T+LMA       F++   I + +   +       N    +L+       + +   E S
Sbjct: 1   MSTLLMAIMFLLTVFVLGQFILSREITGRDEALNRLNSRINDLVEQLALEKNGKQDLEDS 60

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
             N           ++ +   + + +   Q  + +         +Q +    +L++    
Sbjct: 61  VANLQASLSMAENERSRLQALLTAGSGNGQAAQQQVGTLTQELDEQKQASARALSQVELL 120

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            + +        ++              ++      +RL     +    L+   +D   +
Sbjct: 121 NQQIAALRSQIAAVEAALQASESKDQSSQVKIADLGRRLNVALAQRVQELNRYRSDFFGR 180

Query: 214 GVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263
                + R  I I       ++  +F   ++   P     + K+   L            
Sbjct: 181 LREILSDRDNIRIVGDRFVFQSEVLFPSGAADLNPAGQTEMAKLAAALIDLSKEIPPEIN 240

Query: 264 EVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            V+ + GHTD  P        DNW LS  RA +  + L+  GV  DR+    GF   +  
Sbjct: 241 WVLRVDGHTDNVPLSGNGRYPDNWALSSARAIAVVKFLIAQGVPADRLVAA-GFGEFQPI 299

Query: 322 IASDPMNSA--NRRIDILVEDR 341
              D   +   NRRI++ + ++
Sbjct: 300 APGDTPEARATNRRIELKLTEK 321


>gi|118581755|ref|YP_903005.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504465|gb|ABL00948.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 266

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 87/226 (38%), Gaps = 11/226 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             +R +  +   ++  ++E    +  + + +     K+  L +++N           + +
Sbjct: 44  DLKRGQEQLTAENSGLKTELADQARQKQALEQLLASKTDTLSQNVNDLRQKIAALEDENR 103

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L   R+++   L       L  L ++     V+    +  + +++       +FD    
Sbjct: 104 ELRKAREEKTSQLGTTYEKLLQNLKSEIAQGQVVISELKGALTVTM---EAAILFDSGRV 160

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQ 297
              PE  ++L K+ E L  + +  I + GHTD              NW LS  RA +  +
Sbjct: 161 DVKPEGQLILFKLVETLKANRDRAIRVEGHTDNLAPSGALSRLFPSNWELSGARAVNVAR 220

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            L + GV    +S ++    +R    +      + NRRI+I +  R
Sbjct: 221 YLQRQGVDPSLLSAVA-CGEYRPVADNATREGRARNRRIEITLVAR 265


>gi|146284108|ref|YP_001174261.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
 gi|145572313|gb|ABP81419.1| chemotaxis protein MotB [Pseudomonas stutzeri A1501]
          Length = 336

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 1/226 (0%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           ++   + ++L +  F            + +           ++ + E    + E      
Sbjct: 46  SSATPEQKKLISGYFQDPIGFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEAQIDAQ 105

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
            ++     ++R++    L +  +              +LFE T+ G+ I I+D  N PMF
Sbjct: 106 QAETFAEQIERERLELLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMF 165

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAY 296
              S+   P    +L  + E +A     ISI GHTDA PF       NW LS  RA +A 
Sbjct: 166 ALGSAQLQPYFEDILLALVETIAAVPNKISISGHTDAKPFSGRGDFGNWELSASRANAAR 225

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + L+  G  E++I+++ G+A   L    DP N  NRRIDILV  ++
Sbjct: 226 RTLVYGGYPEEQIARVVGYASSALFDRKDPFNPVNRRIDILVLTKK 271



 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 1/173 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N Q II+K+   +    ++ G+WKI +ADF T +MAFFLVMW++++   + KK I  YF
Sbjct: 2   DNTQPIIVKRVKKVA-GGHHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   +AS  + D    P  S    ++  ++   ++  +D +   T  ++  +    
Sbjct: 61  QDPIGFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEAQIDAQQAETFAEQIERERLE 120

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
            +     ++  E+ +    +D    +       ++    +    F    ++ +
Sbjct: 121 LLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQ 173


>gi|195953009|ref|YP_002121299.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932621|gb|ACG57321.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 271

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 7/204 (3%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                ++      +        + +  E+      L +  +  ++  ++ Q +  ++   
Sbjct: 35  AIMRGSKAIPIYAEAFAKAMGMRILPFEQTLPSQILPQPALPKIQLTQKGQYINMQLKRI 94

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              L    +      +    GI + + D     +F   S+   P+   +L  I ++++  
Sbjct: 95  EQMLKKQGLEGKFKVKLVPQGIKLILQDT---VLFKSGSADIDPKYYSLLDSIYKIISSL 151

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I I G TD +P        NW LS DRA S  +  +  G    +I  I+G+  +   
Sbjct: 152 PNPIEIDGFTDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIK-IAGYGKYHPL 210

Query: 322 IASDP--MNSANRRIDILVEDRQG 343
           + +      + NRR++I + + +G
Sbjct: 211 VPNTTPQNKAMNRRVEITILNIKG 234



 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWII 54
                      W I YADF+T+L+A F+ ++ I
Sbjct: 3  KKHKCPEEASERWAIPYADFLTLLLALFISLYAI 36


>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
          Length = 378

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                 AM     ++ + + + S    ++            T T ++          +F+
Sbjct: 208 GGAAQTAMSEPMDVRPVDEVVMSEPEPVMETVAEPEPQVIETYTQVV---SSAFGEALFE 264

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+   P  ++ LQ +   L    E +  I GHTD+   +     N RLS  RA S   
Sbjct: 265 TGSTSLSPSLMLQLQPLLARLKQYPETVVEISGHTDS---KGSDTLNQRLSEQRAQSVAN 321

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            L+  GV  +RI+++ G+       ++D     + NRR++I+
Sbjct: 322 YLISKGVDPERITRVVGYGESLPVASNDTESGRAQNRRVEIV 363


>gi|149377734|ref|ZP_01895468.1| Flagellar motor protein [Marinobacter algicola DG893]
 gi|149357960|gb|EDM46448.1| Flagellar motor protein [Marinobacter algicola DG893]
          Length = 319

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 7/228 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +     +  R     F            N +  +         S D+E+S  + E+  + 
Sbjct: 44  TATASPEQIRAVEGYFKDPVGFTEGGSPNPVDLEGSASVINESSEDIERSDIQIEDQVVE 103

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTP 235
            L++        ++++++L + +   +            +L + T  G+ I I+D+   P
Sbjct: 104 ELAQTL-----EQQQMEELFQDLKERIEQNETLQEFKDQLLIDITSEGLRIQIVDRSQRP 158

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS 294
           MFD   +     +  +L ++ + L      +SI GHTD++PF       NW LS DRA +
Sbjct: 159 MFDSGRAELKYYSQDILFELAKTLGTVNNKLSITGHTDSTPFSGRPGYTNWELSADRANT 218

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           A + L+  GV +++I ++ G +   L    DP    NRRI I+V +++
Sbjct: 219 ARRALVAGGVRQNQIGRVVGLSDSVLFDQDDPQAPVNRRISIIVMNKK 266



 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +Q II+K+K  +    ++ GSWK+ +ADF T +MAFFLV+W+      +  +A+E YF 
Sbjct: 2   EEQPIIVKRKKKVA-AGHHGGSWKVAFADFATAMMAFFLVLWLTATASPEQIRAVEGYFK 60

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                    S    D +      +++  D+   +   ++ V  ++  T +++Q + L  +
Sbjct: 61  DPVGFTEGGSPNPVDLEGSASVINESSEDIERSDIQIEDQVVEELAQTLEQQQMEELFQD 120

Query: 131 IFYLSNSQQS 140
           +       ++
Sbjct: 121 LKERIEQNET 130


>gi|255099860|ref|ZP_05328837.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
          Length = 246

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   +I    +  
Sbjct: 84  QNAKFKKIGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      + + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 14  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 74  EPGSNDLDTLQNAKFKKIGEEIQ 96


>gi|254974362|ref|ZP_05270834.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
 gi|255091756|ref|ZP_05321234.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
 gi|255313486|ref|ZP_05355069.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
 gi|255516174|ref|ZP_05383850.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
 gi|255649270|ref|ZP_05396172.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
 gi|306519371|ref|ZP_07405718.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
          Length = 246

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   ++    +  
Sbjct: 84  QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRD 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      + + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235



 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 14  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 74  EPGSNDLDSLQNAKFKKVGEEIQ 96


>gi|147678453|ref|YP_001212668.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
 gi|146274550|dbj|BAF60299.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
          Length = 255

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 11/195 (5%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                  +S   E   +         L  +   A      L+ L +++   +     + +
Sbjct: 57  ASAMGGGQSVMTEPGASLAPGVSGSSLPADLGQAAAEAADLESLRRELQEYIEQ---NGL 113

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              V       G+++S +D     +F   S+   PE    + KIG++L  +   I + GH
Sbjct: 114 TGRVSVNLEERGLVLSFLD---VALFPLGSARLTPEAQETVGKIGKILLKAPNYIRVEGH 170

Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM-- 327
           TD  P        NW LS+ RA S  Q L+ K     +R+S  +G+   R ++ +D    
Sbjct: 171 TDNLPINTREFPSNWELSVARATSVVQELIHKLNFPPERLSA-TGYGEFRPRMPNDSAEH 229

Query: 328 NSANRRIDILVEDRQ 342
              NRR+D+++   +
Sbjct: 230 RQQNRRVDLVILRSK 244



 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 2/101 (1%)

Query: 16  IIKKKVAI--DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
           +I+KK              W + Y+D +T+LM FF+VM+ +++ +    KAI        
Sbjct: 1   MIRKKQGQSQKSGKAGHERWLLTYSDLITLLMIFFVVMYSLSSINARKFKAIAMSLASAM 60

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
               +          P    S    DL        +   L+
Sbjct: 61  GGGQSVMTEPGASLAPGVSGSSLPADLGQAAAEAADLESLR 101


>gi|298207224|ref|YP_003715403.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
           HTCC2559]
 gi|83849860|gb|EAP87728.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
           HTCC2559]
          Length = 478

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 25/271 (9%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +    + G+ +    P+  S    D   D      + +               +++   +
Sbjct: 229 DECPETPGLAEFNGCPDTDSDGIEDRKDDCPNVAGTAEFNGCPDTDGDGIPDPKDDCPTV 288

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +  Q    C ++     +  +D C +     S N       P   K+    + +  +  D
Sbjct: 289 AGIQALNGCPDADGDGIKDSEDNCPNEAGPASNNGC-----PFEDKDGDGVLDKDDQCPD 343

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                   ++G VA+N    V  E     ++  + +   T +FD + S    E+   LQ 
Sbjct: 344 --------VAGTVANNGCPEVTVE-----VMNELNEYSRTILFDLNKSTIRSESFETLQN 390

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I ++++        I GHTD+         N +LS +RA S    L   GV+ ++++   
Sbjct: 391 IADIMSEYPTAKFHIEGHTDSQ---GSEAYNEKLSRERAASVRTYLTTKGVAANKLTS-E 446

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           G+   R    +        NRR++I +E  +
Sbjct: 447 GYGELRPIATNKTAAGRQQNRRVEIKLEKDR 477


>gi|299134154|ref|ZP_07027347.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
 gi|298590901|gb|EFI51103.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
          Length = 338

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/342 (16%), Positives = 118/342 (34%), Gaps = 29/342 (8%)

Query: 21  VAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
            +  +    L  W   + D   T+++A   ++++++         + Q  +   K L   
Sbjct: 5   RSRHNGGTGLNYWPG-FVDALSTLVLA---IVFLLSVFLVVQF-YLSQEVSGKDKALERL 59

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           +  I    N          +L  ++ I +    L      + +   ++E+          
Sbjct: 60  NAQIAQLTNLLSLEKVTSGNL--NDQIAQLRASLATTEAERDRAKGQIESLSGGAGGGDL 117

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           ++               +        ++ ++       L+  +    + ++++ DL +++
Sbjct: 118 NKQLATEKQISERALAQVEVLNQQISALRRQLAALEDALNASEQKGKESQEKIADLGQRL 177

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIV 250
           +  L+  V +       F      IL    D R         +   FD  S+  LPE   
Sbjct: 178 NVALAQRVQELSRYRSEFFGRLRTILGDRPDIRIVGDRFVFQSEVFFDSGSAALLPEGRN 237

Query: 251 VLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
            L ++   L        A    V+ + GHTD  P  +     NW LS  RA S  Q L+ 
Sbjct: 238 ELDQLATALGDLEKKIPAEIPWVLRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYLIS 297

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            GVS  R+    GF   +         +   NRRI++ + ++
Sbjct: 298 RGVSPQRLVAA-GFGEFQPLDTGTTEEAYKRNRRIELKLTEK 338


>gi|329894187|ref|ZP_08270142.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC3088]
 gi|328923212|gb|EGG30533.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC3088]
          Length = 341

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 105/340 (30%), Gaps = 44/340 (12%)

Query: 45  MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP------PERSSQNKI 98
           MAFF+++     T+    K I               K                  ++  +
Sbjct: 1   MAFFVLLLSFAETEVPKFKQISGSLKAAFGIEKIVPKITVPMARSLLVEEFTPAVAERTV 60

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
               ++   +  ++  +  T   +  +  +     + +  + E  +       E G+ L 
Sbjct: 61  INRKEQQSDETRLESIVKKTEDGEYDEETQLKFQQVQDVLREEINRGMAEVKIENGEILV 120

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG---- 214
              D   +  K ++             ++   ++  +  +I   +S  + D         
Sbjct: 121 NLLDPSSAGGKPDDSGSQKGGPIPQEVVEMTAKIAKVQAEIKEEISVNLVDRASGQSFGG 180

Query: 215 -----------VLFETTRTGILISIIDQRNTPM-------------------FDKSSSIP 244
                          +    +   + D+  + +                   FD  S+  
Sbjct: 181 TSDSTTSNSSEANANSKYQQLQADLADEIASGLAEIEKQGDKIIVRLANQGSFDSGSATL 240

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS 302
                  L K+G  L+  +  + I GHTD  P       + NW LS  RA +    L+ S
Sbjct: 241 KNSFGGTLSKLGNTLSRYSGSVLIEGHTDNVPVGFSERFKSNWDLSASRAAAVADYLLTS 300

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
              +     I G+A  +    +D     + NRRI+++V+D
Sbjct: 301 TPLQGGSVMIKGYADSKPLDTNDSPVGRANNRRIEVIVDD 340


>gi|88812420|ref|ZP_01127670.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
 gi|88790427|gb|EAR21544.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
          Length = 312

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 108/329 (32%), Gaps = 49/329 (14%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K       P     W   +AD  T+L++FF+++   +  D +  K I             
Sbjct: 7   KSGKRRLAPVGAPPWMATFADLSTLLLSFFVLLLSFSEMDVNKYKEIAGSMRMAF----- 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             +     ++PP  +S    D S  +        +     +  +  + +   +    +  
Sbjct: 62  GVQREDVTRDPPMGTSFVARDFSPGQPSQSPFAKIAPTPMSTSEGIRPMPPRVTVAPSGP 121

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                  SL+R                                          ++     
Sbjct: 122 GGPDSLLSLSRQP------------------------------------SDAAVEQARSN 145

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    S    +     +        I+I +   R    F   S+  +   +  ++KIG+ 
Sbjct: 146 LIKLQSLFRQEIERGLIEVAQIGAQIVIRV---REHGSFPSGSAKLIKPFLPAVRKIGQA 202

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
           +  +   + I GHTD  P  N   R NW LS  RA S  + L     V  +RI  ++G A
Sbjct: 203 IRMTEGQVIIAGHTDNVPIHNAQFRSNWDLSAARAISLLRALGAVEAVDANRI-TVAGHA 261

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQG 343
             R  +++D     + NRR++I++ +  G
Sbjct: 262 DTRPIVSNDTPRHRARNRRVEIILVNGNG 290


>gi|260682442|ref|YP_003213727.1| putative chemotaxis protein [Clostridium difficile CD196]
 gi|260686041|ref|YP_003217174.1| putative chemotaxis protein [Clostridium difficile R20291]
 gi|260208605|emb|CBA61322.1| putative chemotaxis protein [Clostridium difficile CD196]
 gi|260212057|emb|CBE02637.1| putative chemotaxis protein [Clostridium difficile R20291]
          Length = 248

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   ++    +  
Sbjct: 86  QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRD 142

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      + + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 143 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237



 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 16  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 76  EPGSNDLDSLQNAKFKKVGEEIQ 98


>gi|149371103|ref|ZP_01890698.1| OmpA domain protein [unidentified eubacterium SCB49]
 gi|149355889|gb|EDM44447.1| OmpA domain protein [unidentified eubacterium SCB49]
          Length = 466

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
           + +NA         ++     G   +  S G+  +    +R      D   +   TK   
Sbjct: 170 FALNAQSAYKYAFDDE----TGTKHLQHSLGLVFKFGGSDRDGDGIYDQDDECPDTKGLA 225

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           +            +  E+     + S     C ++         D C +     + N   
Sbjct: 226 EFNGCPDTDGDGIEDREDACPDAAGSADMNGCPDTDGDGVADNNDNCPTVSGPSANNGCP 285

Query: 172 NYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLS--------GLVADNIVKGVLFETTRT 222
                     +K  A   +          +                +             
Sbjct: 286 WPDTDGDGILDKDDACPEEAGPAANKGCPNRDKDGDGVLDKDDECPEVPGTVARKGCPEP 345

Query: 223 GILISIIDQRNT----PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
            I + I+DQ N      +FD + S    E+   ++ + +++         I GH+D+   
Sbjct: 346 QITVEIMDQINEYSRTILFDTNKSTIRKESHAAIRSMIDIMNEYKTANFLIEGHSDS--- 402

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              A  N  LS  RA +    L   GV   R++   GF   R K ++        NRR++
Sbjct: 403 SGSASYNLELSKKRAAAVKTFLESKGVDASRLTS-EGFGETRPKASNSTAAGRQENRRVE 461

Query: 336 ILVED 340
           + +  
Sbjct: 462 VSLRK 466


>gi|255654793|ref|ZP_05400202.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
 gi|296449538|ref|ZP_06891315.1| chemotaxis protein MotB [Clostridium difficile NAP08]
 gi|296261602|gb|EFH08420.1| chemotaxis protein MotB [Clostridium difficile NAP08]
          Length = 246

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   ++    +  
Sbjct: 84  QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRE 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      I + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 141 KIIQIGKMLNEMNSYIRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 14  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 74  EPGSNDLDNLQNAKFKKVGEEIQ 96


>gi|255305748|ref|ZP_05349920.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
          Length = 246

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   +I    +  
Sbjct: 84  QNAKFKKIGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      + + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 14  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
            +  N +D   +    K   +++
Sbjct: 74  EAGSNDLDTLQNAKFKKIGEEIQ 96


>gi|126698325|ref|YP_001087222.1| putative chemotaxis protein [Clostridium difficile 630]
 gi|115249762|emb|CAJ67579.1| putative OmpA/MotB proton channel [Clostridium difficile]
          Length = 248

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   +I    +  
Sbjct: 86  QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 142

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      + + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 143 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237



 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 16  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 76  EPGSNDLDTLQNAKFKKVGEEIQ 98


>gi|313200583|ref|YP_004039241.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|312439899|gb|ADQ84005.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 313

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 7/201 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               +     +       + +                 +      K+++  + +    ++
Sbjct: 53  GTAFTGENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANN 112

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L    +   +       G+ + I D     +F   +S   P     L +I + L  
Sbjct: 113 LANHLAPMVLEGKIKVMQNNRGVRVDIHDSL---LFAPGASELQPIASGPLNEIAQALKA 169

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +   I + GHTD  P  N     NW LS  RA S  ++L  SG+ E R+S + GF   + 
Sbjct: 170 NNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAV-GFGASQP 228

Query: 321 KIASDP--MNSANRRIDILVE 339
              +      + NRR+ I++ 
Sbjct: 229 LEDNSTPLGRARNRRVSIMIL 249



 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 4/215 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  +++  +N   W + YADF+T+L AFF+VM+ I++ +    + +            T
Sbjct: 2   RRRQVEEDEDNKERWMVSYADFITLLFAFFVVMYAISSVNQGKYEQLTSSLGTAF----T 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                     P   +    I     +      ++L   +  Q+++ + +      L+N  
Sbjct: 58  GENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANNLANHL 117

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                +  +              D                     +A   K     +  +
Sbjct: 118 APMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIAQALKANNHAIQVE 177

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             +    +  D           R   ++ ++    
Sbjct: 178 GHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSG 212


>gi|296878139|ref|ZP_06902154.1| chemotaxis protein MotB [Clostridium difficile NAP07]
 gi|296430892|gb|EFH16724.1| chemotaxis protein MotB [Clostridium difficile NAP07]
          Length = 248

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     K        L  + +   V       G++IS+ D     +FD   ++    +  
Sbjct: 86  QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRE 142

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
            + +IG++L      I + GHTD    +N     NW LS+ RA +  Q+L+ + G++ D+
Sbjct: 143 KIIQIGKMLNEMNSYIRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +S + G+   R    +        NRR+DI++ D +
Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237



 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + Y+D +T+LM FF++M+ ++  D +  K + Q  N          +G   +  P  
Sbjct: 16  RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75

Query: 92  RSSQNKIDLSIDEHITKNSVDLK 114
               N +D   +    K   +++
Sbjct: 76  EPGSNDLDNLQNAKFKKVGEEIQ 98


>gi|82940569|emb|CAJ44300.1| putative Chemotaxis Motility protein B (MotB) [Rhizobium
           leguminosarum bv. viciae]
          Length = 146

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/137 (45%), Positives = 92/137 (67%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           VA  + +G+    +  G+L+SI DQ +  MF+  S++P  E ++ ++KIG +L      I
Sbjct: 10  VAGKLAEGLTVTASEGGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKARGGAI 69

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           +IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RIS++SGFA  RLK+ SDP
Sbjct: 70  AIRGHTDGRQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDP 129

Query: 327 MNSANRRIDILVEDRQG 343
            N+ NRRI+ILV+  QG
Sbjct: 130 FNATNRRIEILVQADQG 146


>gi|225181601|ref|ZP_03735042.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167709|gb|EEG76519.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 227

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D  K + +  S  +               S+ +++ +    + +D+        S L  +
Sbjct: 25  DVIKFQQIMSSIQVSFLGQDGIMESSLDPSRGEMIELAVDHKFEDVLMTYLEVKSHLQEE 84

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
            +   +       G+++ I D+    +FD   +   PE   +L K+  +LA+    I + 
Sbjct: 85  GLANIIDVRIEDRGVVLEIQDRL---LFDTGRAEIRPEARELLVKVAGILANVPNQIIVE 141

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP- 326
           GHTD  P +      NW LS+DRA    + L  +  +  +R    +G+   +   +++  
Sbjct: 142 GHTDNVPIQTAQYPSNWELSVDRAVRVVRYLSERQDIDPERFLA-TGYGEFQPVASNETV 200

Query: 327 -MNSANRRIDILVED 340
              + NRR++I++ +
Sbjct: 201 QGRAKNRRVNIVISE 215


>gi|253998497|ref|YP_003050560.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
 gi|253985176|gb|ACT50033.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
          Length = 313

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 7/201 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               +     +       + +                 +      K+++  + +    ++
Sbjct: 53  GTAFTGENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANN 112

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L    +   +       G+ + I D     +F   +S   P     L +I + L  
Sbjct: 113 LANHLAPMVLEGKIKVMQNNRGVRVDIHDSL---LFAPGASELQPIASGPLNEIAQALKA 169

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +   I + GHTD  P  N     NW LS  RA S  ++L  SG+ E R+S + GF   + 
Sbjct: 170 NNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAV-GFGASQP 228

Query: 321 KIASDP--MNSANRRIDILVE 339
              +      + NRR+ I++ 
Sbjct: 229 LEDNSTPLGRARNRRVSIMIL 249



 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 4/215 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  +++  +N   W + YADF+T+L AFF+VM+ I++ +    + +            T
Sbjct: 2   RRRQVEEDEDNKERWMVSYADFITLLFAFFVVMYAISSVNQGKYEQLTSSLGTAF----T 57

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                     P   +    I     +      ++L   +  Q+++ + +      L+N  
Sbjct: 58  GENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANNLANHL 117

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                +  +              D                     +A   K     +  +
Sbjct: 118 APMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIAQALKANNHAIQVE 177

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             +    +  D           R   ++ ++    
Sbjct: 178 GHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSG 212


>gi|150397861|ref|YP_001328328.1| hypothetical protein Smed_2663 [Sinorhizobium medicae WSM419]
 gi|150029376|gb|ABR61493.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
          Length = 342

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 102/329 (31%), Gaps = 28/329 (8%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYFNPFGKNLMTASKGIFDE 86
           + D   T+LMA   +M++++                  +    N     L          
Sbjct: 18  FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRLNSQINELTQLLALEKSG 74

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           +   E S  N           ++ +   +       +    +          + +    +
Sbjct: 75  KQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKIGRLGSELENERQVSARA 134

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
           +++     + +        +I              +       +RL     +    L+  
Sbjct: 135 MSQIELLNQQIAALRSQIAAIEGALQASEAKDEASQAKISDLGRRLNVALAQRVQELNRY 194

Query: 207 VADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL----- 259
            +D   +     + R  I I       ++  +F    +   PE    + K+   +     
Sbjct: 195 RSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGNELNPEGQAEMTKLAAAILDLAR 254

Query: 260 ---AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              A    V+ + GHTD          RDNW LS  RA S  + L+  GV  DR+    G
Sbjct: 255 EIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVKFLISKGVPADRLVAA-G 313

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
           F  ++    SD     + NRRI++ + ++
Sbjct: 314 FGEYQPIAPSDTQEARAQNRRIELKLTEK 342


>gi|153005701|ref|YP_001380026.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029274|gb|ABS27042.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 256

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 9/223 (4%)

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           N+  +  +L      L  +  +   + + +RD      L    D   +  ++    +  L
Sbjct: 24  NKAAEADQLRARGAELEAALSTTQGELASSRDEASA--LKAQLDALSASKQQLQSQVADL 81

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +  K      K  L+  + +     + L  +     V     R  + + + D+    +F 
Sbjct: 82  ATSKTKLETVKAELEKKSSEYEKMANALRGEIDAGRVELTELRGKMTVKMKDK---ILFS 138

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+         L+ + EVL       I + GHTD  P       NW LS+ RA +  +
Sbjct: 139 SGSATLGRAGKDALRAVAEVLTGVEGKVIRVEGHTDNVPLGRGFATNWDLSVARALAVVR 198

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            L +SGV   R+   +G+  H+   ++D       NRRI+I++
Sbjct: 199 FLQESGVQPSRL-AAAGYGEHQPIASNDTPEGRSQNRRIEIVL 240


>gi|323703350|ref|ZP_08115000.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323531713|gb|EGB21602.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 263

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 11/202 (5%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            ++     K     +S                  +++ +     ++ ++ + ++I   + 
Sbjct: 47  YAIASSLAKTMGGSQSIMDNAGAAIVPGAAREKSNEQGMPESVEQRNMESIKRQIQDYID 106

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               + +   V       G+++S  D     +F    +   P +  ++ KIG +L  +  
Sbjct: 107 K---NGLSGKVTVAIEERGVVVSFQD---VVLFPLGVADLNPSSTQIVDKIGAILHQTNN 160

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
            I + GHTD  P R      NW LSL RA S    L++  G+  +R+S  +G+  +R + 
Sbjct: 161 YIRVEGHTDNLPIRTSKFPSNWELSLARAASVVHRLIEYSGIPAERLSA-TGYGEYRPRR 219

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +D       NRR+DI+V   +
Sbjct: 220 PNDSDANRQQNRRVDIVVLRTK 241



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 38/98 (38%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +KK+   +   +N   W I Y+D +T+L+ FF+VM+ ++  D +   AI           
Sbjct: 1   MKKRGGGEPEKDNKERWLITYSDLITLLLIFFVVMYTLSKIDANKYYAIASSLAKTMGGS 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            +          P     ++      +    +N   +K
Sbjct: 61  QSIMDNAGAAIVPGAAREKSNEQGMPESVEQRNMESIK 98


>gi|332716479|ref|YP_004443945.1| Flagellar motor protein [Agrobacterium sp. H13-3]
 gi|325063164|gb|ADY66854.1| Flagellar motor protein [Agrobacterium sp. H13-3]
          Length = 343

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 105/344 (30%), Gaps = 26/344 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71
           +    D   +        + D   T+LMA       F++   + + +   K  +    N 
Sbjct: 5   RNRRRDRGVDYWPG----FVDALSTLLMAIMFLLTVFVLAQFVLSREISGKDEVLTRLNS 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L          +   E +  +           ++ +   + + +            
Sbjct: 61  QIAELTELLAMEKGSKQDIEDALASLQSTLAASESERSRLQSLLDAGSGNNASANARIGS 120

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                  Q +    +  +     + +        S+           +  ++      +R
Sbjct: 121 LTGELDDQRQANSRASAQIELLNQQIAALRAQIASVEAALQASEAKDTSSQVKIADLGRR 180

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L     +    L+   +D   +     + R  I I       ++  +F    +   P+  
Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGNDLNPQGQ 240

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVL 299
             ++K+   L             V+ + GHTD          RDNW LS  RA S  + L
Sbjct: 241 AEMEKLAAALIDLAKEIPTEINWVLRVDGHTDNVQLSGSGRFRDNWELSSARATSVVKFL 300

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  GV  +R+    GF  ++     D   +   NRRI++ + +R
Sbjct: 301 ISKGVPANRLVAA-GFGEYQPIAEGDTPEARQQNRRIELKLTER 343


>gi|226941125|ref|YP_002796199.1| flagellar motor protein MotB [Laribacter hongkongensis HLHK9]
 gi|226716052|gb|ACO75190.1| MotB [Laribacter hongkongensis HLHK9]
          Length = 293

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 3/163 (1%)

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
               + ++ L  L ++IS  +    V       +L E T  G+ + I+D++N PMFD  S
Sbjct: 104 EERQRERQVLSKLQQRISMAIESNPVLRKYKNQLLLEMTPEGLKVQIVDEKNRPMFDSGS 163

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +  LP T  +L ++G++       +S+ GHTDA+P+        NW LS DRA +A + L
Sbjct: 164 ANLLPHTKDILHELGKMFNDVPNRLSVSGHTDATPYAGGERGYSNWDLSADRANAARREL 223

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ + +I ++ G          + +N  NRRI I+V ++Q
Sbjct: 224 LAGGMQDQKILRVVGLGSANPLDKQNAVNPINRRIAIVVLNKQ 266


>gi|317491635|ref|ZP_07950071.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316921182|gb|EFV42505.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 329

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 3/201 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202
             ++            S       +  +       S          +RL+ L K+I    
Sbjct: 66  PLAVALTHGDRSSASTSPIPGGGDDMMQKEGEVAKSMPDPATKADSERLKKLRKQIDQLI 125

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L+      +   +L      G+ I IID +N PMF+  S+   P    +L+ I  +L   
Sbjct: 126 LTDPRLKALQPHLLINMMDEGLRIQIIDSQNRPMFENGSARVEPYMRDILRAIAPILNDV 185

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD  P+ +      NW LS DRA ++ + L+  G++E +I ++ G A    
Sbjct: 186 PNKISLSGHTDDLPYASGERGYSNWELSADRANASRRELIAGGLAEGKILRVVGMADTMS 245

Query: 321 KIASDPMNSANRRIDILVEDR 341
             +     + NRRI ILV ++
Sbjct: 246 LKSQTSDAAINRRISILVLNK 266


>gi|289207762|ref|YP_003459828.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288943393|gb|ADC71092.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 325

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 84/335 (25%), Positives = 135/335 (40%), Gaps = 60/335 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           ++  Q II+KKKV      ++ GSWK+ +ADF   +MAFFL++W++ A DD+ +  I +Y
Sbjct: 4   EDKTQPIIVKKKVVKG--GHHGGSWKVAFADFAIAMMAFFLLLWLLAALDDEQRAGISEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F      +  A+                                      +       L 
Sbjct: 62  FQNPSAFVGEAAA-------------------------------PGQAPGDGTGVDPSLI 90

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +           E     +  D E   +L ++ D E                        
Sbjct: 91  DFEGMPELIHDPEAMGAPMGLDDEALDELAEARDRE------------------------ 126

Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              L+ L + +   L      +     +L + T  G+ I IID+ N PMFD +SS PLP 
Sbjct: 127 --ALEVLQEALEEALEQSQALEPYKDQLLLDITPEGLRIQIIDRENRPMFDTASSTPLPH 184

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +L+++  ++      ISI GHTDA P       NW LS DRA +A + L+  G    
Sbjct: 185 ADAILRELASLINKVPNRISITGHTDARPLLRPDYSNWELSADRANAARRALIAGGAESG 244

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G A        DP  + NRRI I+V +++
Sbjct: 245 QVARVVGLADSVPFTRDDPEAAINRRISIIVLNQE 279


>gi|254719715|ref|ZP_05181526.1| hypothetical protein Bru83_09258 [Brucella sp. 83/13]
 gi|265984730|ref|ZP_06097465.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
 gi|306837825|ref|ZP_07470687.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
 gi|306841432|ref|ZP_07474134.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
 gi|264663322|gb|EEZ33583.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
 gi|306288538|gb|EFM59890.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
 gi|306407064|gb|EFM63281.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
          Length = 343

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    +D     + NRRI++ + +R
Sbjct: 318 YQPLDTADTADARARNRRIELKLTER 343


>gi|120555689|ref|YP_960040.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120325538|gb|ABM19853.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 319

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 5/227 (2%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +     + +      F            N +  +         + D E S  + E+  + 
Sbjct: 44  TATATPEQKLAVEGYFKDPVGFTDGGSPNPVDLEGSASVIEEATQDQEASTIQIEDEVVD 103

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               E    +++++  Q   +      +          +L + T  G+ I I+D+   PM
Sbjct: 104 ----ELADTLEQRRMRQLFQEFQERIENSDTLQEFKDQLLLDITDEGLRIQIVDRSGRPM 159

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSA 295
           FD         +  +L ++ + L      ISI GHTDA+PF       NW LS DRA +A
Sbjct: 160 FDSGRDELKYYSQDILFELAKKLGSVDNKISITGHTDATPFSGRPGYTNWELSADRANTA 219

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            + L+  GV  ++I+++ G +   L    +P    NRRI I+V +++
Sbjct: 220 RRALVAGGVRLEQIARVVGLSDSVLFDKDNPTAPVNRRISIIVLNKK 266



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 1/190 (0%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +Q IIIK+K  +    ++ GSWK+ +ADF T +MAFFLV+W+      + K A+E YF 
Sbjct: 2   EEQPIIIKRKKKVV-GGHHGGSWKVAFADFATAMMAFFLVLWLTATATPEQKLAVEGYFK 60

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                    S    D +       +   D        ++ V  ++  T ++++ ++L   
Sbjct: 61  DPVGFTDGGSPNPVDLEGSASVIEEATQDQEASTIQIEDEVVDELADTLEQRRMRQLFQE 120

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                 +  +              + L             ++         + +  +  K
Sbjct: 121 FQERIENSDTLQEFKDQLLLDITDEGLRIQIVDRSGRPMFDSGRDELKYYSQDILFELAK 180

Query: 191 RLQDLAKKIS 200
           +L  +  KIS
Sbjct: 181 KLGSVDNKIS 190


>gi|90418921|ref|ZP_01226832.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90337001|gb|EAS50706.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 342

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 107/325 (32%), Gaps = 21/325 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + +   K  +    N     L             
Sbjct: 19  FVDALSTLLLAIMFLLSVFVLAQFLLSREITGKDEVLDRLNSQINELTQLLALERSTTQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            E    N           ++ +   + S +               + S++ E  + + ++
Sbjct: 79  NEDQIANLRASLAGVEEERSRLQEALESGSGSAAAASARVEGLQTALSEEQELSQRARSQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + L        ++ +         ++ +       +RL     +    LS   +D
Sbjct: 139 VELLNQQLAALRQQIGALERALEVSESRDAESQTKIADLGRRLNVALAQRVQELSRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + R  I I       ++  +F   S +        + K+ E +        
Sbjct: 199 FFGRLREILSDRENIRIVGDRFVFQSEVLFPSGSDVLQEAGTDEMAKLAEAIVALNREIP 258

Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +    +I + GHTD  P       DNW LS +RA +  + L+  GV  +R+   +GF  +
Sbjct: 259 SDINWIIRVDGHTDNVPISGGRFEDNWELSTERAGAVVKYLISQGVPPERL-AATGFGEY 317

Query: 319 RLKIASDP--MNSANRRIDILVEDR 341
           +     +     + NRRI+  + +R
Sbjct: 318 QPIDPDNTPEARARNRRIEFKLTER 342


>gi|305665914|ref|YP_003862201.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
 gi|88710689|gb|EAR02921.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
          Length = 446

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 16/280 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F  +G        G+  +    +       D                         +  +
Sbjct: 167 FEDYGVKHFQHLAGLAIKFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDADGDGIEDSK 226

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           ++    + S++   C ++         D C +     ++    +     ++ +       
Sbjct: 227 DSCPNAAGSKEMNGCPDADGDGVADKDDACPNEAGTAALAGCPDADGDGVADKDDSCPNE 286

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDK 239
               ++     +      V D   +                   +   + D   T +FD 
Sbjct: 287 AGPSENKGCPWTDKDGDSVLDKDDQCPDVAGTVANNGCPEVTEEVQKQLNDYARTILFDT 346

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S    E+  V+  I ++L+       ++ GHTD+      A+ N  LS  RA S    
Sbjct: 347 GKSSIKAESTSVMVDIIQILSEYPTAKFTVEGHTDSV---GSAKLNQTLSESRANSVRDF 403

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           L+  G+   R+S I G+   +    ++       NRR++I
Sbjct: 404 LIDKGIGSSRLSAI-GYGEDKPIATNNTRSGRKQNRRVEI 442


>gi|320354494|ref|YP_004195833.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122996|gb|ADW18542.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 365

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 111/323 (34%), Gaps = 29/323 (8%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +      P +   W I ++D M  +   FL ++               +     + L   
Sbjct: 52  RSRTPPRPVH---WSIAWSDLMMTMFILFLTLFA--------------HLRTHEEILAHG 94

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                 ++  P ++ Q    L         S+     + + K                + 
Sbjct: 95  KPNKVADETMPVQTDQTPSALVFHPISQDVSL---TIADDAKDIIPPQREQEGADVLIRH 151

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +   +            L +     +S N+       PL    +   K+++ L      +
Sbjct: 152 TLTEEKPQPESLAPIPQLPQQPSAPQSANQTAASPAQPLPPAPVPEEKKQEELITKIYDL 211

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           S         +    V     +T  +I   D     +F    +    E +V L+KI  ++
Sbjct: 212 SKVALEKEQLDRFASVELVPDKTMRIILTGD----LLFASGQAELTREALVSLKKISALI 267

Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
             +  +I++ GHTD  P +N     NW LSL RA    + L++ +G+   +   +SG++ 
Sbjct: 268 KTTPYMINVIGHTDDRPVKNARFPSNWELSLARAGRVARFLIEDTGLPATQF-SVSGYSS 326

Query: 318 HRLKIASDPMNSA--NRRIDILV 338
            R    +   ++   NRR+++++
Sbjct: 327 FRPLKPNTSEDNRKINRRVELVL 349


>gi|254700373|ref|ZP_05162201.1| hypothetical protein Bsuib55_05884 [Brucella suis bv. 5 str. 513]
 gi|261750869|ref|ZP_05994578.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|261740622|gb|EEY28548.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
          Length = 343

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDPM--NSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADTRARNRRIELKLTER 343


>gi|254694373|ref|ZP_05156201.1| hypothetical protein Babob3T_06882 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214683|ref|ZP_05928964.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260916290|gb|EEX83151.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 343

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNPEIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|261341475|ref|ZP_05969333.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
 gi|288316271|gb|EFC55209.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
          Length = 306

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 64/333 (19%), Positives = 121/333 (36%), Gaps = 62/333 (18%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
            +  +   IIK+         + G+WK+ +AD       F L M  +             
Sbjct: 4   TRGKEHTTIIKRSSRKSHDTFHGGAWKVAFAD-------FTLAMMAL------------- 43

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
                   +M +      ++   + + ++  D      IT+ +                 
Sbjct: 44  ---FMVLWIMGSVTEEERKEIVSQLNGESIFDGQTLSPITQPNG---------------- 84

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                              +       +   +               +   +    +  +
Sbjct: 85  -------------------VGGKIAVTEKRDRGDHKHPQKETPTPAAMAKSASLDDVKSR 125

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            +  ++DLA+ I    S     +    +  E    G+ I I D +   MF +SS+I  P 
Sbjct: 126 SQNEIEDLARIIMKITSAY---DAQSNLKIEIVPQGLRILITDDQKREMFQRSSAILTPF 182

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L +    L      I I GHTDA+ FR+    +N+ LS +RA  A +VL  +G+ +
Sbjct: 183 FKRLLTEFAPALNKIDNKIIITGHTDATRFRDQDLYNNYNLSGERAMQARKVLTHAGLDQ 242

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           D++ ++SG A   L   ++P++S+NRRI+I+V 
Sbjct: 243 DKVLQVSGMADQMLLDPANPLSSSNRRIEIMVL 275


>gi|307611161|emb|CBX00805.1| hypothetical protein LPW_25091 [Legionella pneumophila 130b]
          Length = 253

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 117/302 (38%), Gaps = 63/302 (20%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           +MAFFL+MW++ + +   K  I +YF                    P + +    +   +
Sbjct: 1   MMAFFLLMWLVASLNKAQKAGIAEYFKQ------------------PMKVALFGGESMGN 42

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
              T       I  T+ +            ++  ++    +                   
Sbjct: 43  RKATIKGGGPNIEDTDGQVSATNKPLINESIAKDKEIIESQ------------------- 83

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRT 222
                                     K+L++L  +I+ S         + K +L +    
Sbjct: 84  ----------------------ANEIKKLEELKSEINLSMEKDPSLAGLKKQLLMDVVSD 121

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA- 281
           G+ I +ID +  PMFD  S    PE   +L  I ++L      I+I+GHTDA+P+ N   
Sbjct: 122 GLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVPNKITIQGHTDANPYHNPEE 181

Query: 282 --RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
               NW LS  RA +A + L+K+G+ E+++  ++G++   L    +P N  NRRI I+V 
Sbjct: 182 LEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPYNPENRRISIIVM 241

Query: 340 DR 341
            +
Sbjct: 242 KK 243


>gi|23502572|ref|NP_698699.1| hypothetical protein BR1714 [Brucella suis 1330]
 gi|161619642|ref|YP_001593529.1| hypothetical protein BCAN_A1752 [Brucella canis ATCC 23365]
 gi|254703491|ref|ZP_05165319.1| hypothetical protein Bsuib36_06117 [Brucella suis bv. 3 str. 686]
 gi|260568797|ref|ZP_05839265.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|261754122|ref|ZP_05997831.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
 gi|23348573|gb|AAN30614.1| OmpA family protein [Brucella suis 1330]
 gi|161336453|gb|ABX62758.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
 gi|260154181|gb|EEW89263.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|261743875|gb|EEY31801.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
          Length = 343

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEIKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|294828058|ref|NP_712396.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
           str. 56601]
 gi|304570492|ref|YP_001665.2| motility protein B [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|293385905|gb|AAN49414.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 336

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           TK+S   K      +KQ ++  + I  L    + E        ++ + +   K +DLE  
Sbjct: 105 TKSSNKEKELIDENEKQSKKFRDLIDGLKEDLERERENCQKKTEALQKEYERKISDLESR 164

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I    +     +SK K L+  +KK L  L+ + +   + L  +     +  +     ++I
Sbjct: 165 ILVLNDE----ISKLKHLSENQKKELDRLSDQANELENKLTDEIKKGQIRLKRFHDRLVI 220

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-N 284
           +I D+     FD  S+    + +  L KI E+L +    +I I GHTD  P R      N
Sbjct: 221 NIDDK---ISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFSDN 277

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           W+LS +RA S     ++S + + R   ++G+   +  +++D     + NRR+DI+V  R
Sbjct: 278 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 336


>gi|17986607|ref|NP_539241.1| hypothetical protein BMEI0324 [Brucella melitensis bv. 1 str. 16M]
 gi|62290586|ref|YP_222379.1| hypothetical protein BruAb1_1699 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700502|ref|YP_415076.1| hypothetical protein BAB1_1726 [Brucella melitensis biovar Abortus
           2308]
 gi|163845293|ref|YP_001622948.1| hypothetical protein BSUIS_B1189 [Brucella suis ATCC 23445]
 gi|189024803|ref|YP_001935571.1| hypothetical protein BAbS19_I16130 [Brucella abortus S19]
 gi|225853169|ref|YP_002733402.1| hypothetical protein BMEA_A1766 [Brucella melitensis ATCC 23457]
 gi|237816090|ref|ZP_04595086.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254689881|ref|ZP_05153135.1| hypothetical protein Babob68_06877 [Brucella abortus bv. 6 str.
           870]
 gi|254698031|ref|ZP_05159859.1| hypothetical protein Babob28_10068 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730915|ref|ZP_05189493.1| hypothetical protein Babob42_06907 [Brucella abortus bv. 4 str.
           292]
 gi|256045322|ref|ZP_05448216.1| hypothetical protein Bmelb1R_12582 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256061749|ref|ZP_05451886.1| hypothetical protein Bneo5_15516 [Brucella neotomae 5K33]
 gi|256114280|ref|ZP_05455025.1| hypothetical protein Bmelb3E_15803 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256258134|ref|ZP_05463670.1| hypothetical protein Babob9C_12474 [Brucella abortus bv. 9 str.
           C68]
 gi|256263341|ref|ZP_05465873.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370121|ref|YP_003107632.1| flagellar motor protein [Brucella microti CCM 4915]
 gi|260547172|ref|ZP_05822910.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
 gi|260565786|ref|ZP_05836269.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260755413|ref|ZP_05867761.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
           870]
 gi|260758635|ref|ZP_05870983.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
           292]
 gi|260762467|ref|ZP_05874804.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884428|ref|ZP_05896042.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
           C68]
 gi|261325753|ref|ZP_05964950.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
 gi|265991747|ref|ZP_06104304.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995585|ref|ZP_06108142.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|297248983|ref|ZP_06932691.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
 gi|17982219|gb|AAL51505.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
 gi|62196718|gb|AAX75018.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616603|emb|CAJ11682.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
 gi|163676016|gb|ABY40126.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189020375|gb|ACD73097.1| OmpA/MotB domain protein [Brucella abortus S19]
 gi|225641534|gb|ACO01448.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
 gi|237788753|gb|EEP62965.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|256000284|gb|ACU48683.1| flagellar motor protein [Brucella microti CCM 4915]
 gi|260095537|gb|EEW79415.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
 gi|260151159|gb|EEW86254.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260668953|gb|EEX55893.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
           292]
 gi|260672893|gb|EEX59714.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675521|gb|EEX62342.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
           870]
 gi|260873956|gb|EEX81025.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
           C68]
 gi|261301733|gb|EEY05230.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
 gi|262766869|gb|EEZ12487.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002703|gb|EEZ15106.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093340|gb|EEZ17409.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|297174116|gb|EFH33473.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
 gi|326409725|gb|ADZ66790.1| OmpA/MotB domain protein [Brucella melitensis M28]
 gi|326539433|gb|ADZ87648.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
          Length = 343

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|239832801|ref|ZP_04681130.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239825068|gb|EEQ96636.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 343

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L++
Sbjct: 79  MQDTIANLQASLSTAETERSRLQSLLNEGSGAGAAAEKRAGELSASLDAEKQVSARALSQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQISALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA------- 260
              +     + +  I I       ++  +F   SS   P     ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSSDINPAGQDEMKKLADAVNQLNQEIP 258

Query: 261 -HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++   ASD     + NRRI++ + +R
Sbjct: 318 YQPLDASDTADARAKNRRIELKLTER 343


>gi|307300434|ref|ZP_07580214.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
 gi|307318299|ref|ZP_07597734.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306895981|gb|EFN26732.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306904600|gb|EFN35184.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
          Length = 342

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 103/346 (29%), Gaps = 32/346 (9%)

Query: 20  KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYF 69
           +       N        + D   T+LMA   +M++++                  +    
Sbjct: 5   RRREPRAINYWPG----FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRL 57

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N     L          +   E S  N           ++ +   +       +    + 
Sbjct: 58  NSQINELTQLLALEKSGKQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKI 117

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                    + +    ++++     + +        +I              +       
Sbjct: 118 GRLGSELENERQVSARAMSQIELLNQQIAALRSQIAAIEGALQASEAKDDASQAKIADLG 177

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPE 247
           +RL     +    L+   +D   +     + R  I I       ++  +F    S   PE
Sbjct: 178 RRLNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGSDLNPE 237

Query: 248 TIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297
               + K+   L        A    V+ + GHTD          RDNW LS  RA S  +
Sbjct: 238 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 297

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            L+  GV  DR+    GF  ++     +     + NRRI++ + ++
Sbjct: 298 FLISKGVPADRLVAA-GFGEYQPIAPGESQEARAQNRRIELKLTEK 342


>gi|260768753|ref|ZP_05877687.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
 gi|260616783|gb|EEX41968.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
          Length = 324

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 3/216 (1%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             E     +   Q  E   ++L+ D+              + + +  +     +      
Sbjct: 50  DDEEGSQLIQYFQTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRIRDASLIEGE 109

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           +   + L+  ++ I   ++ L   +    V  + T  G+ I I D    PMF++  S   
Sbjct: 110 VDTHQELELFSRLIEDQVNEL---DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMT 166

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P    +L  +  V +     I + GHTDAS FR  +  NW LS +RA SA   L   GV 
Sbjct: 167 PYYQDLLLNLAPVFSRVENAIIVTGHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVP 226

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
             +I ++SG A     +  +P +  NRRI+I +   
Sbjct: 227 RAQIFQVSGMAESAPLLPENPKSGQNRRIEIFLLTS 262



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 45/142 (31%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D   IIKKK        + G WK+  AD M  + A FL++W++   DD+    + QYF
Sbjct: 2   SQDGVTIIKKKKRGGHGGGHGGGWKVAMADLMISMFALFLILWLLTMMDDEEGSQLIQYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   T S         P +  Q        E        L  G  +  ++ +    
Sbjct: 62  QTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRIRDASLIEGEVDTHQELELFSR 121

Query: 130 NIFYLSNSQQSEHCKNSLTRDS 151
            I    N        N      
Sbjct: 122 LIEDQVNELDGAGSVNVQITPQ 143


>gi|225628282|ref|ZP_03786316.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|254708420|ref|ZP_05170248.1| hypothetical protein BpinM_16075 [Brucella pinnipedialis
           M163/99/10]
 gi|254708727|ref|ZP_05170538.1| hypothetical protein BpinB_00411 [Brucella pinnipedialis B2/94]
 gi|254714572|ref|ZP_05176383.1| hypothetical protein BcetM6_14787 [Brucella ceti M644/93/1]
 gi|254717469|ref|ZP_05179280.1| hypothetical protein BcetM_13911 [Brucella ceti M13/05/1]
 gi|256030252|ref|ZP_05443866.1| hypothetical protein BpinM2_06326 [Brucella pinnipedialis
           M292/94/1]
 gi|256160427|ref|ZP_05458116.1| hypothetical protein BcetM4_15574 [Brucella ceti M490/95/1]
 gi|256255633|ref|ZP_05461169.1| hypothetical protein BcetB_15393 [Brucella ceti B1/94]
 gi|260167927|ref|ZP_05754738.1| hypothetical protein BruF5_06077 [Brucella sp. F5/99]
 gi|261219302|ref|ZP_05933583.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
 gi|261222836|ref|ZP_05937117.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
 gi|261315919|ref|ZP_05955116.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316219|ref|ZP_05955416.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261322363|ref|ZP_05961560.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
 gi|261757366|ref|ZP_06001075.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
 gi|265987280|ref|ZP_06099837.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|265998795|ref|ZP_06111352.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
 gi|225616128|gb|EEH13176.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|260921420|gb|EEX88073.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
 gi|260924391|gb|EEX90959.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
 gi|261295053|gb|EEX98549.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
 gi|261295442|gb|EEX98938.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261304945|gb|EEY08442.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261737350|gb|EEY25346.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
 gi|262553484|gb|EEZ09253.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
 gi|264659477|gb|EEZ29738.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M292/94/1]
          Length = 343

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 109/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+   +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLANAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|15966529|ref|NP_386882.1| hypothetical protein SMc03992 [Sinorhizobium meliloti 1021]
 gi|15075800|emb|CAC47355.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
          Length = 344

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 103/346 (29%), Gaps = 32/346 (9%)

Query: 20  KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYF 69
           +       N        + D   T+LMA   +M++++                  +    
Sbjct: 7   RRREPRAINYWPG----FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRL 59

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N     L          +   E S  N           ++ +   +       +    + 
Sbjct: 60  NSQINELTQLLALEKSGKQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKI 119

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                    + +    ++++     + +        +I              +       
Sbjct: 120 GRLGSELENERQVSARAMSQIELLNQQIAALRSQIAAIEGALQASEAKDDASQAKIADLG 179

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPE 247
           +RL     +    L+   +D   +     + R  I I       ++  +F    S   PE
Sbjct: 180 RRLNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGSDLNPE 239

Query: 248 TIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297
               + K+   L        A    V+ + GHTD          RDNW LS  RA S  +
Sbjct: 240 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 299

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            L+  GV  DR+    GF  ++     +     + NRRI++ + ++
Sbjct: 300 FLISKGVPADRLVAA-GFGEYQPIAPGESQEARAQNRRIELKLTEK 344


>gi|294850964|ref|ZP_06791640.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
 gi|294821607|gb|EFG38603.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
          Length = 343

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAKINPKGQVEMKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|183598599|ref|ZP_02960092.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
 gi|188020776|gb|EDU58816.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
          Length = 317

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)

Query: 185 AMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             +   R + L + +   +      + +   +L +    G+ I I+D  N PMF   S+ 
Sbjct: 106 EDQSNYRFEKLKQSLEQAILKDPRLNELKPHLLIDMIDDGLRIQIVDSENRPMFMVGSAY 165

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS 302
             P    +L+ I  +L      ISI GHTD  P+      +NW LS DRA ++ + L+  
Sbjct: 166 VEPHMRDILRAIAPLLNDVPNKISISGHTDDLPYANGANYNNWELSADRANASRRELIAG 225

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           G+++D+I ++ G A       ++ +   NRRI I+V +
Sbjct: 226 GLNQDKILRVVGMASSIHLDKNNGLAPVNRRISIIVLN 263



 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 48/102 (47%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N+  II  KK        + GSWKI YADFMT +MAFFLVMW+I+ +       I +Y
Sbjct: 2   RGNNAHIIRVKKRVASHQNGHGGSWKIAYADFMTAMMAFFLVMWLISISSPQELTQIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           F    K  + +     D  NP     ++ +    D     N+
Sbjct: 62  FRTPLKTAINSGTKSGDATNPIPGGGKDIVFRDGDILPEPNN 103


>gi|150019084|ref|YP_001311338.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
           8052]
 gi|149905549|gb|ABR36382.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 251

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 11/184 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +  + N   +      S     +   +++L D+ KK+   ++      +   V+      
Sbjct: 66  VADNSNSVPDVIESTNSDADEDSNAEREKLSDVKKKVDELVNNS---ELKGSVITSIQER 122

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282
           G++IS  D      F+   +   P+    L  I ++L      I + GHTD         
Sbjct: 123 GLIISFNDS---VFFNSGQAAIKPDWQNKLISISKILNGIDNYIRVEGHTDNVVINTDYF 179

Query: 283 -DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             NW+LS  RA +  + L+  G V  +R+S + G+  +R   ++      +ANRR+DI++
Sbjct: 180 HSNWQLSAVRASNVVEFLIYQGNVKPERLSSV-GYGEYRPVKSNTTEEGKAANRRVDIVI 238

Query: 339 EDRQ 342
            D +
Sbjct: 239 LDTK 242



 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +KK++  +        W + Y DF+T++M FFL+M+ I+  D    K +         + 
Sbjct: 1   MKKRMKREKDD--TERWMLSYLDFITLMMIFFLMMYAISNIDTKKSKTLANSLKIGFNSG 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
                    + +          +   DE  
Sbjct: 59  NGEKVIAVADNSNSVPDVIESTNSDADEDS 88


>gi|304317567|ref|YP_003852712.1| OmpA/MotB domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779069|gb|ADL69628.1| OmpA/MotB domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 240

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 199 ISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I S L  L+  +N+   V ++    G +IS+ D     +FD  S+   P+    L KIG 
Sbjct: 88  IESQLDKLIKQNNLQNMVTYKVDERGFVISLNDTL---LFDTGSADVKPDQKATLIKIGN 144

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +L      I + G+TD  P  N     NW LS+ RA +  ++L+    +   +IS + G+
Sbjct: 145 ILKAMPNYIRVEGYTDNVPINNSQFHSNWELSVIRATNVVEILVNDVKIDPAKISAV-GY 203

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341
             +R  + +D       NRR+DI++ + 
Sbjct: 204 GEYRPIVPNDSDKNRQLNRRVDIVIMNS 231



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
          +++    D+   N   W + Y+D +T+LM FF+V++ I+  +    + I        
Sbjct: 1  MRRFDDNDEKKVNNERWLLTYSDMITLLMIFFIVLYTISTVNSQKFQQIAASLGKTF 57


>gi|319952835|ref|YP_004164102.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421495|gb|ADV48604.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 448

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 86/285 (30%), Gaps = 16/285 (5%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
             +  F  +    M    G+  +    +       D                        
Sbjct: 164 QYKHSFEDYLAPHMQHLAGLSIKFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDADGDG 223

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            +  ++     + S++   C ++         D C +     ++    +     ++ +  
Sbjct: 224 IEDSKDACPNEAGSKEMNGCPDADGDGVADKDDACPNEAGTAALKGCPDADGDGVADKDD 283

Query: 184 L--AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------FETTRTGILISIIDQRNT 234
              A       +            L  D++   V               +   + D   T
Sbjct: 284 ECPAEAGPASNKGCPFLDKDGDGVLDKDDMCPDVAGTVANKGCPEVTAEVQKQLNDYART 343

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD   S     +  V+  I  +L        ++ GHTD+      A+ N  LS  RA 
Sbjct: 344 ILFDTGKSSIKAASTSVMVDIITILKEYPNAKFTVEGHTDSV---GSAKLNQSLSESRAL 400

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  + L++ G+ E R+S I G+   +   ++        NRR++I
Sbjct: 401 SVKEFLVEKGIEEFRLSAI-GYGEEKPIASNSTRAGRTQNRRVEI 444


>gi|158422249|ref|YP_001523541.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
 gi|158329138|dbj|BAF86623.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
          Length = 472

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/284 (19%), Positives = 100/284 (35%), Gaps = 8/284 (2%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           Q  N    +   A+       +                    ++      +T        
Sbjct: 189 QSLNAPTASRPDAAVSARGGGDFATDGDVFSPQPQDAAEAQASAQQANAQATAVGGNGAP 248

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                   S    ++   ++   D  +G+                        ++     
Sbjct: 249 AAAPKADPSKLDATKAAPSAGKGDMAQGELAKGDAANGAQAKGAAAKGDQAKGEQAKGDA 308

Query: 187 K--------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                     +     L  +  + +   +       V    T+ GI++S+ D  N  MF 
Sbjct: 309 NAGAATFKIDQANADKLKTEAVAAVQSNLGSVAAPKVDVRVTKEGIVLSLTDDINYSMFP 368

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S++P    +  + KIGE L      + IRG+TD  P+R+   DNWRLS  RA+  Y +
Sbjct: 369 VGSAVPDGRLVRAMAKIGEALGKRPGEVVIRGYTDGRPYRSDTYDNWRLSTARAHMTYYM 428

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L++ G+ E R++ I G+A   LK  ++P  + NRRI+IL+    
Sbjct: 429 LVRGGLQEPRVAMIEGYADRNLKNKAEPYAAENRRIEILLRVPN 472



 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 1/202 (0%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            ++     +II K+   ++  ++  +WK+ +ADFMT +MAFFL+MW+IN TD D +KAI 
Sbjct: 2   ADKGEHHELIIIKRHEDEEHEHHSSAWKVAHADFMTAMMAFFLIMWLINVTDKDVRKAIA 61

Query: 67  QYFNPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            YFNP      MT  KG+ + ++     +    D       T  +       T + KQ +
Sbjct: 62  SYFNPVHLAESMTERKGLNEPEDIKPDGTSADGDQKSALKETAGAGTGPGSDTQRGKQDR 121

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
               + + + +    E   + ++       +  +  +      ++    +     +    
Sbjct: 122 AAFQDPYAVLSKLAGEADPSEMSTPDAAVGETGQPGNSAGDAVRDPFDPVYWQMNQARKM 181

Query: 186 MKRKKRLQDLAKKISSTLSGLV 207
              K   Q L    +S     V
Sbjct: 182 RTEKPGPQSLNAPTASRPDAAV 203


>gi|315180456|gb|ADT87370.1| chemotaxis LafU protein [Vibrio furnissii NCTC 11218]
          Length = 324

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 3/216 (1%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             E     +   Q  E   ++L+ D+              + + +  +     +      
Sbjct: 50  DDEEGSQLIQYFQTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRMRDASLIEGE 109

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           +   + L+  ++ I   ++ L   +    V  + T  G+ I I D    PMF++  S   
Sbjct: 110 VDTHQELELFSRLIEDQVNEL---DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMT 166

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P    +L  +  V +     I + GHTDAS FR  +  NW LS +RA SA   L   GV 
Sbjct: 167 PYYQDLLLNLAPVFSRVENAIIVTGHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVP 226

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
             +I ++SG A     +  +P +  NRRI+I +   
Sbjct: 227 RAQIFQVSGMAESAPLLPENPKSGQNRRIEIFLLTS 262



 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 46/142 (32%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
             D   IIKKK     +  + G WK+  AD M  + A FL++W++   DD+    + QYF
Sbjct: 2   SQDGVTIIKKKKRGGHSGGHGGGWKVAMADLMISMFALFLILWLLTMMDDEEGSQLIQYF 61

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                   T S         P +  Q        E        L  G  +  ++ +    
Sbjct: 62  QTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRMRDASLIEGEVDTHQELELFSR 121

Query: 130 NIFYLSNSQQSEHCKNSLTRDS 151
            I    N        N      
Sbjct: 122 LIEDQVNELDGAGSVNVQITPQ 143


>gi|226327780|ref|ZP_03803298.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
 gi|225203484|gb|EEG85838.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
          Length = 350

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE--NYFLPPLSKEKILAMKRK 189
                ++ +E+ +  L    EKG+    +T+      ++   N        ++   +  K
Sbjct: 50  SPQELTRVAEYFRTPLKVAIEKGRFSGDATNPIPGGGRDPVYNEGDILPKGQEDKQLNEK 109

Query: 190 KRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++ + L + +    L+     ++   +L +    G+ I IID+ N PMF   S+   P  
Sbjct: 110 QQFRRLKENLEQVILNDPRLKDLKPHLLIDMMDEGLRIQIIDKANRPMFRVGSATVEPYM 169

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306
             +L  I  +L  +   IS+ GHTD  P+ + A    NW LS DRA ++ + L+ +G++E
Sbjct: 170 KDILTAIAPILNDTPYKISLSGHTDDIPYASGAFKYSNWELSTDRANASRRELIGAGLNE 229

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++ ++ G A     +  D   +ANRRI ILV  +Q
Sbjct: 230 WKVLRVVGMASTVHLVKEDGFAAANRRISILVLTKQ 265



 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 9  QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
          + N Q I +KK+        + G+WKI YADFMT +MAFFLVMW+++ +       + +Y
Sbjct: 2  KSNSQIIRVKKRGRKQH-NAHGGAWKIAYADFMTAMMAFFLVMWLLSISSPQELTRVAEY 60

Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKI 98
          F    K  +   +   D  NP     ++ +
Sbjct: 61 FRTPLKVAIEKGRFSGDATNPIPGGGRDPV 90


>gi|306844705|ref|ZP_07477290.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
 gi|306274877|gb|EFM56647.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
          Length = 343

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 111/326 (34%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S + + +    +L +
Sbjct: 79  MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLNAEKQVSARALNQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P+  V ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           ++    ++     + NRRI++ + +R
Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343


>gi|77456741|ref|YP_346246.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf0-1]
 gi|77380744|gb|ABA72257.1| chemotaxis MotB protein [Pseudomonas fluorescens Pf0-1]
          Length = 355

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 119/334 (35%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+   I    ++ G+WKI +AD                              
Sbjct: 2   ENNQPIIIKRVKRIA-GGHHGGAWKIAFAD-------------------------FATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       ++ +  S                    +       
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFKDPVGFS--------------------ESGTPYII 75

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           ++               +    +  K    +  +E    + E   L  L +E    +   
Sbjct: 76  DLGGTPTLAPENTLNPEVKSQPQPDKVTVDTEQVEGMAEQVEKERLELLLQELQNKVDEN 135

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T  G+ I I+D  N PMFD  S+   P   
Sbjct: 136 PQLQKFKDQI----------------LFEITPNGLRIQIMDAENRPMFDSGSARLKPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+     + +
Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYVGNGDFGNWELSANRANAARRALVAGSYPDSQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 240 VARVVGYASSALFDKENPFNPVNRRIDIVVLTKK 273


>gi|39933998|ref|NP_946274.1| hypothetical protein RPA0921 [Rhodopseudomonas palustris CGA009]
 gi|192289418|ref|YP_001990023.1| hypothetical protein Rpal_0991 [Rhodopseudomonas palustris TIE-1]
 gi|39647845|emb|CAE26365.1| possible flagellar motor protein MotB [Rhodopseudomonas palustris
           CGA009]
 gi|192283167|gb|ACE99547.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 341

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 102/338 (30%), Gaps = 16/338 (4%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L+  FLV+    + +   K       N     
Sbjct: 5   RGRRQESGFNYWPGFVDALSTLILGIVFLLTVFLVVQFFLSQEVTGKDKALAELNAKIAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L          +   E                ++ V                       +
Sbjct: 65  LNDILSLEKLGKLNLEEQLAQMRAGLSAAESERDRVKGLYDGLAGAGNDAAGRATELNKA 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              + +    +L +     + +        ++ +  +       + +       +RL   
Sbjct: 125 LDSEKQISARALAQVEVLNQQIAALRRQLAALEEALDASEKRGKESQNKIADLGQRLNVA 184

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +    LS   ++   +       R  I I       ++   FD   ++ LPE    L 
Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244

Query: 254 KIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           K+ + L             V+ + GHTD  P     + NW LS  RA S  Q LM  GV 
Sbjct: 245 KVADALKELDKKIPAELPWVVRVDGHTDKRPITGSFKSNWELSSARAISVVQYLMSRGVP 304

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             R+    GFA  +    +D  ++   NRRI++ + +R
Sbjct: 305 AQRLVAA-GFAEFQPLDTADTDDAYKRNRRIELKLTER 341


>gi|91216090|ref|ZP_01253058.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
 gi|91185607|gb|EAS71982.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
          Length = 319

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 112/307 (36%), Gaps = 13/307 (4%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD---EQNPPERSSQNKIDL 100
           L+  F V+ ++          +E  F    +     ++ + D   E+   E       D 
Sbjct: 7   LLIGFTVLNLVGCVSQKKFLELEDEFGTLQRVNTQLNRKLDDCNSEKTALEDELSYSKDR 66

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                  ++ +   + +T    +      +    ++SQ             E+ +    +
Sbjct: 67  IEVLKTQRDDLTKDLQTTKSTLEKLNDSYDALEQNSSQALAANSKQNRELLEQLELKEGA 126

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
              E++  ++    L   S +           +     +   LS  + +   +G+  E  
Sbjct: 127 LAEEQNRLEQLQKDLQARSNQIEELQSLIADKEQKMISLKENLSRALTNFEGQGLSVELR 186

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRN 279
              + +S+    N  +F   S     E    ++++G+VLA + ++   I GHTD  P+  
Sbjct: 187 DGKVYVSM---ENKLLFASGSWTVGGEGQKAVKELGKVLADNPDIAVLIEGHTDNVPYGG 243

Query: 280 IAR--DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
                DNW LS  RA    ++L+K+G ++   ++   G       + +      + NRRI
Sbjct: 244 NGPLTDNWDLSTKRATEVLKLLLKNGKINPQNLTAA-GKGEFAPLVPNTTEEGKAKNRRI 302

Query: 335 DILVEDR 341
           ++++  +
Sbjct: 303 EVVLTPK 309


>gi|332519379|ref|ZP_08395846.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045227|gb|EGI81420.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 476

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 95/298 (31%), Gaps = 23/298 (7%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
           +   K     F  +       S GI  +    +       D +                 
Sbjct: 186 ESKYKH---SFEDYLTKHFQHSAGIAVKFGGKDTDGDGIYDKNDACPEVAGLEAFNGCPD 242

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           +     +  +++   ++   +   C ++       GKD C +    K++N   +     +
Sbjct: 243 SDGDGIEDAKDDCPNVAGLAEYNGCPDTDGDGVVDGKDDCPTVKGLKALNGCPDADGDGV 302

Query: 179 SKEKIL-AMKRKKRLQDLAKKISSTLSGLVA------------DNIVKGVLFETTRTGIL 225
           + +K     +             +   G+V              N     +       ++
Sbjct: 303 ADDKDNCPNEAGPAANSGCPWPDTDGDGVVDKDDKCPNEVGTVANNGCPEVVAQPTQEVI 362

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
             +     T +FD   S    +T  VL+ I  +L    +   +I GHTD+         N
Sbjct: 363 DQLNSYARTILFDTGKSSFKEQTKEVLKNITAILKEYPDSNFTIEGHTDSV---GSKSSN 419

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            +LS  RA +    L+ +G+S  R+S   GF       ++   N    NRR +I ++ 
Sbjct: 420 QKLSERRANAVRDYLIANGISASRLSAY-GFGEDYPVDSNATRNGRKNNRRTEIKLKK 476


>gi|316932465|ref|YP_004107447.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600179|gb|ADU42714.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 341

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 101/338 (29%), Gaps = 16/338 (4%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L+  FLV+    + +   K       N     
Sbjct: 5   RGRRQESGFNYWPGFVDALSTLILGVVFLLTVFLVVQFFLSQEVTGKDKALAELNARIAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L          +   E                ++ V                       +
Sbjct: 65  LNDILSLEKLGKLNLEEQLAQMRAGLSAAETERDRVKGLYDGLAGAGNDAAGRAGELGKA 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              + +    +L +     + +        ++    +       + +       +RL   
Sbjct: 125 LDSEKQISSRALAQVEVLNQQIAALRRQLAALEDALDASEKRGKESQSRIADLGQRLNVA 184

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +    LS   ++   +       R  I I       ++   FD   ++ LPE    L 
Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244

Query: 254 KIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           K+ + L             V+ + GHTD  P     R NW LS  RA S  Q LM  GV 
Sbjct: 245 KVADALKELDKQIPAELPWVVRVDGHTDRRPITGAFRSNWELSSARAISVVQYLMSRGVP 304

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             R+    GFA  +    +D  ++   NRRI++ + +R
Sbjct: 305 AQRLVAA-GFAEFQPLDTADTEDAYRRNRRIELKLTER 341


>gi|189423111|ref|YP_001950288.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
 gi|189419370|gb|ACD93768.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
          Length = 271

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 99/324 (30%), Gaps = 68/324 (20%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   N   W + YAD       F  +++ +              F        T  
Sbjct: 4   KKEPEKHANHERWLVSYAD-------FITLLFAV--------------FVTMYAMSQTDK 42

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K + +       S       +  +     S D+K     + +       N    +  +Q 
Sbjct: 43  KKVEEVAAAMRESFGYSTQAAAGQRGVLQSQDIKPIPAIKPEMAVIPMINKMPPAGPRQG 102

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              K                                          K K   ++  +  S
Sbjct: 103 GMDKGRG---------------------------------------KTKAEEKEFKEIQS 123

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  + L+       V    TR G+++S+ +      FD  S++  P    +L  I E + 
Sbjct: 124 AIEAYLIKHGAQNKVSIGITRRGLVVSLKEA---GFFDSGSAVIKPAGYQLLNTILEAMT 180

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
             +  + + GHTD  P        NW LS+ RA +  + L K+  V   ++S  +G+   
Sbjct: 181 QYSNPLRVEGHTDNIPISTPLFPSNWELSVSRATNVLRYLQKNYDVEPGKLSA-TGYGEF 239

Query: 319 RLKIASDPMNSA--NRRIDILVED 340
           R    +        NRR+DI++  
Sbjct: 240 RPTAENSTPEGRSKNRRVDIVLLS 263


>gi|256829772|ref|YP_003158500.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578948|gb|ACU90084.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 300

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 2/188 (1%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
               +      +  +    P + +         K  +++ K+  + +         + ++
Sbjct: 71  PPSMSVGAGGQSAADPQLKPLIMEGTTGMFAEGKSQEEILKEAMAKMIEERLKEYKEELI 130

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
            +T   G+ I ++     P FD +SS    +   VL+ I + +      I++ GHTDA P
Sbjct: 131 IDTFDNGVRIQMLYGEGNPFFDSASSQLTGDARNVLKVIADTVRDLPNQIAVEGHTDAVP 190

Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
                    NW LS DRA SA  +L + G+   R+ +++G+A  +  I  +P +  NRR+
Sbjct: 191 LGGPSSRYTNWELSTDRASSARVILEEFGLDPKRMVRVAGYAATQPLIRENPEDPRNRRV 250

Query: 335 DILVEDRQ 342
            IL+ +  
Sbjct: 251 SILLFNDP 258



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--------PFGKNLMTASKGI 83
           +WKI YAD +T +MAFFL+MW++N   ++ K+ +  YF         P   ++    +  
Sbjct: 24  AWKIAYADLVTAMMAFFLLMWLLNNVSEEKKEQLSIYFKEFSVIDGLPPSMSVGAGGQSA 83

Query: 84  FDEQNPPERSSQNKIDLSIDEHITK 108
            D Q  P          +  +   +
Sbjct: 84  ADPQLKPLIMEGTTGMFAEGKSQEE 108


>gi|116330986|ref|YP_800704.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116124675|gb|ABJ75946.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 340

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 14/230 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            S  Q K+++ L +N+      +++   K +     E  K +     +  ++N       
Sbjct: 121 ESERQGKKFRDLLDNLKDELEQEKTACQKKAEALQKEYEKKVAYLEAIILALN------- 173

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             +S+ K L+  +KK L  LA + +   + L  +     +  +     ++I+I D+    
Sbjct: 174 DEISRLKNLSENQKKELDRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDR---I 230

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-NWRLSLDRAY 293
            FD  S+    + +  L KI E+L +    +I I GHTD  P R      NW+LS +RA 
Sbjct: 231 SFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERAL 290

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S     ++S + + R   ++G+   +  +++D     + NRR+DI+V  R
Sbjct: 291 SVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 340


>gi|121997035|ref|YP_001001822.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
 gi|121588440|gb|ABM61020.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
          Length = 346

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 83/194 (42%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
           RD +          ++    +     L  L   +   +  ++  +   +   + L     
Sbjct: 64  RDPQAAHPPASRDIIDFEGERRAPIDLSGLPMGQGGFIPTEEMQELAEQFQDAVLDDPDL 123

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 +L E T  G+ I ++D    PMF+  S+ P   T  +L+ +  VL      +S+
Sbjct: 124 AEYADQILLEITDDGLRIQLVDHDGRPMFELGSADPREHTEEILRALARVLEDVPNPVSL 183

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            GHTDA PF     DNW LS DRA +A   L+  G+  +RI ++ G+A        DP  
Sbjct: 184 SGHTDARPFARDDYDNWSLSTDRANAARLTLLDGGLPAERIGQVVGYADTVPFDPDDPRA 243

Query: 329 SANRRIDILVEDRQ 342
             NRRI +++  R+
Sbjct: 244 DINRRISVVLLSRE 257



 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
            +   + ++IKK     D  ++ GSWKI +ADFMT + A FLV+W++ A DDD ++ I Q
Sbjct: 3   EENKTRPVVIKKVAKHGDD-HHGGSWKIAFADFMTAMFAIFLVLWLLLALDDDQRQGIGQ 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF         AS+ I D +                          ++    Q       
Sbjct: 62  YFRDPQAAHPPASRDIIDFEGERRAPIDLSGLPMGQGGFIPTEEMQELAEQFQDAVLDDP 121


>gi|313674311|ref|YP_004052307.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941009|gb|ADR20199.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 315

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 110/303 (36%), Gaps = 14/303 (4%)

Query: 48  FLVMWIINAT---DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           F+ + I+++           +           M     +  + N  E       +     
Sbjct: 7   FIALIILSSVACVTQKKYDELLAEKVKLDAEKMKLEDKVALKNNTIESLEAQLAEEQETL 66

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              + +      S +  +Q  +  N+ +    S   +  K+   ++ +  +      ++ 
Sbjct: 67  EQVRKAYQDSQSSLDSLQQQYKTLNDYYDKLMSSSGKLNKDLANKEKQLLQMEADL-EIS 125

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           K  N E    L    +      K     +     +   +S  + +     +  E     +
Sbjct: 126 KQRNDELAANLAEREERVAELEKVLADKEAAVNALKQKVSEALLNFKENDLTVEVKNGKV 185

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +S+ +Q    +F+  S++   + +  L+K+ +VL  + +  I + GHTD  P     + 
Sbjct: 186 YVSLAEQL---LFNSGSTVVDTKGVEALKKLAQVLKDNQDVNIVVEGHTDDVPISGNNKY 242

Query: 284 ---NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              NW LS+ RA S  ++L  +G S +R++   G      K ++D       NRR +I++
Sbjct: 243 LKDNWDLSVLRATSIVRILTNNGASPERVTAA-GKGEFAPKSSNDSAEGRRENRRTEIIL 301

Query: 339 EDR 341
             +
Sbjct: 302 TPK 304


>gi|227823348|ref|YP_002827320.1| hypothetical protein NGR_c28210 [Sinorhizobium fredii NGR234]
 gi|227342349|gb|ACP26567.1| flagellar motor protein [Sinorhizobium fredii NGR234]
          Length = 343

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 101/329 (30%), Gaps = 28/329 (8%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYFNPFGKNLMTASKGIFDE 86
           + D   T+LMA   +M++++                  +    N     L          
Sbjct: 19  FVDALSTLLMA---IMFLLSVFVTAQFLMGREITGKDEVLNRLNSQINELTQLLALEKSG 75

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           +   E S  N           ++ +   +            +          + +    +
Sbjct: 76  KQDLEDSLANLQASLSQSEGERSRLQSLLDQGAGSADAASQKIGRLGSELENERQISSRA 135

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
           +++     + +        +I              +       +RL     +    L+  
Sbjct: 136 MSQIELLNQQIAALRSQIAAIEGALQASEAKDQSSQAKIADLGRRLNVALAQRVQELNRY 195

Query: 207 VADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL----- 259
            +D   +     + R  I I       ++  +F   S+   PE    + K+   L     
Sbjct: 196 RSDFFGRLREILSDRENIRIVGDRFVFQSEVLFSSGSNDLNPEGQGEMAKLATALLDLAK 255

Query: 260 ---AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              A    V+ + GHTD  P        DNW LS  RA S  + L+  GV  DR+    G
Sbjct: 256 EIPAEINWVLRVDGHTDNVPLSGTGRFADNWELSSARATSVVKFLISRGVPADRLVAA-G 314

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
           F  ++     +     + NRRI++ + ++
Sbjct: 315 FGEYQPIAVGESLEARAQNRRIELKLTEK 343


>gi|307944516|ref|ZP_07659856.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
 gi|307772265|gb|EFO31486.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
          Length = 344

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 115/348 (33%), Gaps = 34/348 (9%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +    +   +        + D   T+L+   +++++++         + Q  +     L 
Sbjct: 6   RARRRNQGTDYWPG----FVDAMATLLL---VIIFLLSIFMLAQF-FLSQQLSGRDTVLN 57

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  I +             +L       + S+    G  ++        +     +  
Sbjct: 58  RLNAQISELTQLLALERAGARELEDTITGLQASLSDATGERDRLLGLLESSSGEADAAGG 117

Query: 138 QQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + ++             + L +         ++ ++       L   +    + + ++  
Sbjct: 118 KAAQLENLLDDEKQVSQRALAQVELLNQQISALRRQLAAANAALEASEAKENQSQAKIAS 177

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPL 245
           L K++++ L   V +       F      IL    D R         +  +F   S    
Sbjct: 178 LGKRLNAALVQRVQELSRYRSDFFGRLREILSQRSDIRVVGDRFVFQSEVLFGSGSEDIN 237

Query: 246 PETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSA 295
           PE  V L+K+ + +             V+ + GHTDA P     R  +NW LS  RA S 
Sbjct: 238 PEGQVELKKLADAIKELAVQIPDEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISV 297

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            + L+  G+   R+    GF   +     D     + NRRI++ + +R
Sbjct: 298 VRYLVDQGIDPKRLVAA-GFGEFQPLEEGDTPEALAKNRRIELKLTER 344


>gi|241206240|ref|YP_002977336.1| hypothetical protein Rleg_3551 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860130|gb|ACS57797.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 343

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 99/315 (31%), Gaps = 15/315 (4%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +  L+  F+V   I + +   +  +    N     L              + S  N    
Sbjct: 30  IMFLLTVFVVGQFILSREITGRDEVLNRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                  ++ +   + + +  +   +           +Q +  + +L++     + +   
Sbjct: 90  LASAEGDRSRLQALLSAGSGGQDAAQKRIGSMTQELDEQKQVSERALSQVELLNQQIAAL 149

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                ++              +        RL          L+   +D   +     + 
Sbjct: 150 RSQIAAVEAALQASEDKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209

Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRG 270
           R  I I       ++  +F    +   PE    + K+   L             V+ + G
Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAKLASALLDLAKEIPPEINWVLRVDG 269

Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           HTD  P       RDNW LS  RA S  + L+  GV  DR+    GF   +     D  +
Sbjct: 270 HTDNVPLGGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGDTPD 328

Query: 329 SA--NRRIDILVEDR 341
           +   NRRI++ + ++
Sbjct: 329 ARSTNRRIELKLTEK 343


>gi|254473145|ref|ZP_05086543.1| OmpA/MotB [Pseudovibrio sp. JE062]
 gi|211957866|gb|EEA93068.1| OmpA/MotB [Pseudovibrio sp. JE062]
          Length = 344

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 113/350 (32%), Gaps = 34/350 (9%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNPF 72
           ++ + +   + +        + D M+ L+  F+ +  I               ++  N  
Sbjct: 4   VRTRRSQSSSEDYWPG----FVDAMSALLLVFIFLLSIFMIAQFFLSQQLSGRDKVLNRL 59

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            + +   ++ +  E+            L +         D   G  N++           
Sbjct: 60  NQQIAELTELLALEKANVGDLESTISSLQLGLEQASGERDRLQGLLNERSGQIDEAGGAL 119

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
               ++       S    ++      + + L + I   E+     L   +    + + R+
Sbjct: 120 AALQAKLEGEQNISSKALAQVELLNQQISALRRQIAVLEDA----LDASEKRDRESQTRI 175

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSI 243
            DL K+++  L+  V +       F      IL    D           +  +F      
Sbjct: 176 ADLGKRLNVALAQRVQELSRYRSDFFGRLREILAQRSDIEVVGDRFVFQSEVLFSSGDEE 235

Query: 244 PLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAY 293
             P+    L  +   +             V+ + GHTDA P     R  DNW LS  RA 
Sbjct: 236 VNPQGRNQLDILASAILELEGQIPDEINWVLRVDGHTDARPLSGTGRLRDNWELSAARAI 295

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDR 341
           S  + L+  GV  DR+    GF   +      +D   + NRRI++ +  R
Sbjct: 296 SVVKYLISKGVEPDRLVAA-GFGEFQPLEEGTTDEAYAKNRRIELKLTQR 344


>gi|197285528|ref|YP_002151400.1| motility protein B [Proteus mirabilis HI4320]
 gi|227356023|ref|ZP_03840414.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
 gi|194683015|emb|CAR43481.1| chemotaxis protein (motility protein B) [Proteus mirabilis HI4320]
 gi|227163800|gb|EEI48708.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
          Length = 349

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 3/164 (1%)

Query: 182 KILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +   +  K++ + L + +    L      ++   +L +    G+ I IID+ + PMF   
Sbjct: 102 EDKQLNEKQQFRKLKENLEQVILQDPRLKDLKPHLLIDMMDEGLRIQIIDKESRPMFKVG 161

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           S+   P    +L  I  +L  S   IS+ GHTD  P+ + A    NW LS DRA ++ + 
Sbjct: 162 SATVEPYMKDILTAIAPILNDSPYKISLSGHTDDIPYASGALKYSNWELSTDRANASRRE 221

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L+ +G++E ++ ++ G A     +  D    ANRRI ILV  +Q
Sbjct: 222 LIGAGLAEWKVLRVVGMASTVHLVKEDGFAPANRRISILVLTKQ 265


>gi|116328262|ref|YP_797982.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116121006|gb|ABJ79049.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 340

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 14/230 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            S  Q K+++ L +N+      +++   K +     E  K +        ++N       
Sbjct: 121 ESERQGKKFRDLLDNLKDELEQEKTACQKKAEALQKEYEKKVAYLEARILALN------- 173

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             +S+ K L+  +KK L  LA + +   + L  +     +  +     ++I+I D+    
Sbjct: 174 DEISRLKNLSENQKKELDRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDR---I 230

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-NWRLSLDRAY 293
            FD  S+    + +  L KI E+L +    +I I GHTD  P R      NW+LS +RA 
Sbjct: 231 SFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERAL 290

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S     ++S + + R   ++G+   +  +++D     + NRR+DI+V  R
Sbjct: 291 SVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 340


>gi|312879597|ref|ZP_07739397.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
 gi|310782888|gb|EFQ23286.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
          Length = 242

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             A    KR +   + ++  L  L   + + K +  +  + G+ +S+ +Q    +F    
Sbjct: 79  QDAGDANKRTEQFKQGVAQQLQALAEREGLQKEITVKVNQRGVTVSLSEQ---FLFAPGG 135

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM 300
           +   P +  VL KIG++L      +++ GHTD +P R    +DNW LS  RA      L 
Sbjct: 136 ADLSPLSRRVLFKIGQILKTFPNQLAVEGHTDNAPLRGGLYKDNWGLSAGRAAVVASYLA 195

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            + G+S +R+  + G+   +  + +D     + NRR+D+++ 
Sbjct: 196 GTVGLSPNRLEAV-GYGSAKPIVPNDTPEHRALNRRVDLVLL 236



 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 37/108 (34%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K            +   Y D +T+L+ FF+ ++  ++ D    K +   F      L  
Sbjct: 3   RKKKEAQGSAGAPLFMATYGDMVTLLLTFFVFLYSFSSIDVQKFKKMMFSFQGALGVLPG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                 D         Q+  D +      K  V  ++ +  +++  Q+
Sbjct: 63  GKTIQEDSGVYQGYVGQDAGDANKRTEQFKQGVAQQLQALAEREGLQK 110


>gi|78223750|ref|YP_385497.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78195005|gb|ABB32772.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 292

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 86/226 (38%), Gaps = 11/226 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           + +     +        +++ +      ++         DL + +   E       ++  
Sbjct: 65  KVREEAAGLAKEKEKLGADNKELEQVLRAKTDTLSQSVADLRQKVTDLETENTRLKAEIA 124

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                R++++++++K     L  +  +     V     +  + ++++D     +FD   +
Sbjct: 125 ETRKAREEKVREVSKTYEDLLDRMKGEIAQGQVTISELKGKLTVNMVDA---ILFDSGKA 181

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN----IARDNWRLSLDRAYSAYQ 297
                 + VL K+ ++L    + +I I GHTD              NW LS  RA +  +
Sbjct: 182 EVKQGGMEVLAKVVDILKGVQDKMIRIEGHTDNVQIVGNLTKRFPTNWELSAARAINVAR 241

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            L   G+    +  ++    +R   ++D     + NRRI+I++  R
Sbjct: 242 YLQGQGIDPTVLVAVA-NGEYRPVASNDTEEGRAKNRRIEIVLVPR 286


>gi|297180147|gb|ADI16369.1| flagellar motor protein [uncultured bacterium HF130_12L15]
          Length = 343

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 106/344 (30%), Gaps = 26/344 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71
           +    +   +        + D   T+L+A       F++   + + +   K  +    N 
Sbjct: 5   RTRRRERGVDYWPG----FVDALSTLLLAIMFLLSVFVLAQFLLSREITGKDEVLTRLNS 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L              E    N           ++ ++  +            E   
Sbjct: 61  QINELTQLLALERSNTQDAEDQLANLQASLQAAETERSRLEQLLSQGAGADAAAEEEIGT 120

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +  ++ +  + +L++     + +        ++            +         +R
Sbjct: 121 LSGALDEERQISQRALSQVELLNQQIAALRKQIGALEGALEVSEARDRESSTKIADLGRR 180

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L     +    L+   +D   +     + R  I I       ++  +F   S +      
Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGSEVINDAGR 240

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVL 299
             + K+ E +             V+ + GHTD  P       RDNW LS  RA S  + L
Sbjct: 241 TEMAKLAEAIIDLQKEIPPEINWVLRVDGHTDNVPLSGTGRYRDNWELSSARATSVVKYL 300

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  GV   R+    GF   +  +  D  ++   NRRI++ + +R
Sbjct: 301 ISQGVPASRLVAA-GFGEFQPLVEGDTPDARNKNRRIELKLTER 343


>gi|152996653|ref|YP_001341488.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150837577|gb|ABR71553.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 301

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 2/210 (0%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              + +  + +  N +       K   K  DL+       +                 K 
Sbjct: 63  QDPTGASTAGYSANPIDLGGSPAKSAEKKLDLQLPQAGSIDVQSRDKFLGNGPDSAESKS 122

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + ++ ++  S ++ L++      +       G+ I+++D  + PMF++ S+  +P+    
Sbjct: 123 INNMLREEMSKMNTLLSQQKNMRIEIT--PLGVRITLLDDPDKPMFERGSARMMPDIENT 180

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           L  +  +    T  I I GHTD+S F     DNW LS  RA +A  +L + GV + RI++
Sbjct: 181 LLSMAPIFNKVTNPIVITGHTDSSKFGGGRVDNWDLSALRANAARHILEEGGVEDKRIAQ 240

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           + G +        D  ++ NRRI I +   
Sbjct: 241 VIGLSDTIPYNRLDTDSAENRRISITLLTD 270



 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGK 74
           +I++   I    ++ G+WKI  ADF   +MAFFLV+WI++    +  ++IE YF  P G 
Sbjct: 9   VIRRVKKIKKGGHHGGAWKIALADFALAMMAFFLVLWIMSVASPEELRSIEGYFQDPTGA 68

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +    S    D    P +S++ K+DL + +  + +
Sbjct: 69  STAGYSANPIDLGGSPAKSAEKKLDLQLPQAGSID 103


>gi|307825895|ref|ZP_07656110.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307733014|gb|EFO03876.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 313

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 105/310 (33%), Gaps = 33/310 (10%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + Y D   +++   + +  ++  + + ++A                  +   +  P  
Sbjct: 30  WLLTYLDVFVLIVMLVITLITVSGINTERQQAAAN------------KPQVIKPKKAPAA 77

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                   +     +   V+          +++   N     + ++  E    + T ++ 
Sbjct: 78  ICPPVATSTTINTPSPVVVENDPIKPIILTEHKVEINPDSSNAKTEPIESNSIAHTTNAP 137

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           + K   ++     + +         L++E  L  +  K + +                + 
Sbjct: 138 EIKVATETATNSIATSTNSKQAAANLTEETELQQQLTKAIDEF--------------GLN 183

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V  +  +    + I D+    +F  S +        +L+++  +L  S  +I I GHT
Sbjct: 184 KAVNIKVNQGYAQLEIQDK---VLFKSSEADLTASGGALLKRLMPLLKQSVGLILIEGHT 240

Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-- 329
           D  P +      NW L   RA S    L+   +   R+  I+ +A       +       
Sbjct: 241 DNIPIKTAQFPSNWELGASRATSVLHFLVLQQLDSSRLRAIT-YADTMPIADNSTPEGKE 299

Query: 330 ANRRIDILVE 339
            NRR++IL++
Sbjct: 300 KNRRVNILIK 309


>gi|225871803|ref|YP_002753257.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
 gi|225791684|gb|ACO31774.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
          Length = 262

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 11/205 (5%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            S        +   +      +       N      +P  +     A++ ++ L+ + ++
Sbjct: 35  ASSKADLRKQQQFAQSIHSAFTALGLFPENGHGKGPVPEANPPADTALQTQENLEKMREQ 94

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   L+  +       V  +    G++IS+   R    +D  S+ P P ++  +  I   
Sbjct: 95  LQKKLAAQI---AAHQVALQLGPDGLVISL---REAGFYDSGSATPKPSSMGAVGIIAHE 148

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
           L      + I GHTD  P        NW LS  RA +  ++L+++ GV+  R+S   G+A
Sbjct: 149 LYQVPYALRIEGHTDNVPIHTAKFDSNWELSTARATTMARLLIENFGVAPQRLSAA-GYA 207

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
            +    ++      + NRR+DI+V 
Sbjct: 208 QYHPIASNATAAGRAENRRVDIIVL 232



 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   +  PN+   W + YADF+T+L AFF+V++  +  D   ++   Q  +     L  
Sbjct: 2   RRKRHESHPNH-ERWLVSYADFITLLFAFFVVLYASSKADLRKQQQFAQSIHSAFTALGL 60

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
             +    +   PE +      L   E++ K    L+
Sbjct: 61  FPENGHGKGPVPEANPPADTALQTQENLEKMREQLQ 96


>gi|218658934|ref|ZP_03514864.1| flagellar motor protein MotB [Rhizobium etli IE4771]
          Length = 151

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 1/152 (0%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K       +I+  + G VA  + +G+       G+L+SI DQ +  MF+  S++P  E +
Sbjct: 1   KEADAFQHQIAQQI-GGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMV 59

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           + +++IG +L      ++IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RI
Sbjct: 60  LAMERIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRI 119

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           S++SGFA  RLK+ ++P N+ANRRI+ILV+  
Sbjct: 120 SQVSGFADRRLKLPAEPFNAANRRIEILVQAD 151


>gi|296188354|ref|ZP_06856746.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
 gi|296047480|gb|EFG86922.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
          Length = 277

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            + +++DL KK+ S L     + +   V  E    G+++S+ D      F+   +  +  
Sbjct: 85  EESKMEDLKKKVDSYLQK---NGMQNSVTTEVDERGLVVSLRDTL---FFETGKAEVIAA 138

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSE 306
           +   L +IG++L      + I GHTD  P  N     NW+LS  RA +  ++L+ +GV  
Sbjct: 139 SQGKLVEIGKILNQLDNTMRIEGHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPP 198

Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            ++S ++ +  +R  + +      + NRR+DI+V   +
Sbjct: 199 KKLSSVA-YGEYRPVLDNSTEDGRARNRRVDIIVVSNK 235



 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 32/90 (35%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +   N   W + Y+DFMT+LM  F+V++ ++  D      + Q  +         
Sbjct: 2   KKKKQEEHENSERWLLSYSDFMTLLMILFVVLYAMSNVDKAKFSQLSQSMSIAMGGGKIM 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
                         S N  D   +E   ++
Sbjct: 62  QGNENSPNISNSSPSGNSSDGKTEESKMED 91


>gi|300023960|ref|YP_003756571.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525781|gb|ADJ24250.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 342

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 21/271 (7%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           +  +Q+  D       T +S+  +                      +  S   ++     
Sbjct: 73  KGKAQSSQDELAALQATLSSLKTENEKLTGVGLGADERAKSAEDKLAGLSSDLQSQKNIS 132

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            E    +        ++ ++       L   +    +  K ++DL  ++++ L+  V + 
Sbjct: 133 DEALSKVDLLNQQLIALRRQIAGLSDALDAAEKKGAESDKTIKDLGARLNAALAQQVQEL 192

Query: 211 IVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL-- 259
                 F      +L    D R         +  +F   S+   PE +  + +I E +  
Sbjct: 193 KRYRSDFFGRLRELLKDRKDIRVVGDRFVFESEVLFSSGSASLTPEGMAAMDQIAEAILE 252

Query: 260 ------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                       + I GHTDA P  N     NW LS  RA S  + L+  GV  DR+   
Sbjct: 253 LQKEIPGDIDWALQINGHTDARPISNPQYPSNWELSTARAASVVKYLVLRGVPADRLVAA 312

Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            G+   +   AS+   +   NRRI++ +  R
Sbjct: 313 -GYGEFQPVDASNTEEAYQRNRRIELKLTSR 342


>gi|300694372|ref|YP_003750345.1| chemotaxis protein motb (motility protein b), flagellar motor
           protein [Ralstonia solanacearum PSI07]
 gi|299076409|emb|CBJ35725.1| Chemotaxis protein motB (Motility protein B), flagellar motor
           protein [Ralstonia solanacearum PSI07]
          Length = 314

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 3/201 (1%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK-ILAMKRKKRLQDLAKKISSTL 203
                  ++   L  S  +++++ +      P + +++ +        L  L + I   +
Sbjct: 72  FGGAGSGDQSSILNGSPAIKQNMPQPNPSPSPTVQRQRNVRDESDDAALNKLKQHIMEMI 131

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
               V +     +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L   
Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGAALNDV 191

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              IS+ GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G       
Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251

Query: 322 IASDPMNSANRRIDILVEDRQ 342
             +D  N  NRRI I+V + +
Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272



 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 52/117 (44%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +    S   K ++         +V  +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILNGSPAIKQNMPQPNPSPSPTVQRQRNVRDESDDAA 119


>gi|153008534|ref|YP_001369749.1| hypothetical protein Oant_1203 [Ochrobactrum anthropi ATCC 49188]
 gi|151560422|gb|ABS13920.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 343

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 111/326 (34%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   + + + + K ++    N   + L             
Sbjct: 19  FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + +  N           ++ +   +   +               S   + +    +L++
Sbjct: 79  MQDTIANLQASLSSTESERSRLQSLLNEGSGAGAAAEKRAGELSESLDAEKQVSARALSQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N       +         +RL     +    L+   +D
Sbjct: 139 VELLNQQISALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +     + +  I I       ++  +F   S+   P     ++K+ + +        
Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSADINPAGQDEMKKLADAVIQLNQEIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  
Sbjct: 259 DDINWVLRVDGHTDNVPLTGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
           ++   ASD  ++   NRRI++ + +R
Sbjct: 318 YQPLDASDTADARSKNRRIELKLTER 343


>gi|223936109|ref|ZP_03628023.1| OmpA/MotB domain protein [bacterium Ellin514]
 gi|223895331|gb|EEF61778.1| OmpA/MotB domain protein [bacterium Ellin514]
          Length = 280

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 11/209 (5%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +E     L     K ++   +     + N++    +  L  +     K K+++   AK
Sbjct: 46  ATTEGQLRGLEPLPAKLQEAKGNLAKALAENQKNQEQISELQAQVADLQKEKEKVGQTAK 105

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +   +     D   + V     +  + ++I+D+    MFD   +   P+   VL+KI  
Sbjct: 106 GLEDEMRS---DLESRDVTISNLKGKLTVNILDR---VMFDSGEAAVKPDGESVLRKIAT 159

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +LA   E  I + GHTD  P RN    NW LS  RA +A   + +  GV   R+    G+
Sbjct: 160 ILAGHPELKIQVIGHTDNVPIRNRFASNWELSAARAIAAVHFITEKAGVDPRRVGAA-GY 218

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342
             +R    +      + NRRI I +   +
Sbjct: 219 GEYRPIADNSTAEGRARNRRIAITILPDE 247


>gi|291280094|ref|YP_003496929.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
 gi|290754796|dbj|BAI81173.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
          Length = 249

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 14/178 (7%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +  +     +   L  +     +   +++ L  L   I          N+   +    T 
Sbjct: 60  EAGRKSEMGKEEILSKMDFVDKVKKSQEQMLSGLKNYIEQA-------NLSSQISVVKTD 112

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
            GI + I+D     +F   S+  LP  I +L+K+  V+  +   I + GHTD  P     
Sbjct: 113 KGISVRIMDS---VLFAPGSAEILPSAIPILEKLAAVMRDTPYNILVEGHTDDIPISTPK 169

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              NW LS  RA +  + L+  GV  +++S   G+A +   + +      + NRR++I
Sbjct: 170 YPSNWELSTARAVAVVKFLISRGVKPEKLSAA-GYAQYHPLVPNITPENRAKNRRVEI 226



 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 27/89 (30%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              ++       W + ++D  T+L+ FF+++  + + D    K            L    
Sbjct: 4   KKCEECKAGAPEWMVTFSDMTTLLLTFFVLLLSMASLDQRKIKEALGSLQGALGVLEAGR 63

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           K    ++    +           E +   
Sbjct: 64  KSEMGKEEILSKMDFVDKVKKSQEQMLSG 92


>gi|302873043|ref|YP_003841676.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307688801|ref|ZP_07631247.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302575900|gb|ADL49912.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
          Length = 256

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 11/200 (5%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
            T  S     L     L+ +   +        S E        ++L  + +++   ++  
Sbjct: 55  GTSPSGGAGVLDGGQGLDMATLSQAVKDAASKSAELDYEKLEAEKLTKVKEQVDKLIAES 114

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
               +           G++I++ D      FD   +    +    L  + ++L+     +
Sbjct: 115 ---ELNGSATTAIEERGLVITVKDNL---FFDSGKATVKEQYKRQLNALSKILSSIDNYV 168

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIAS 324
            + GHTD  P +      NW+LS  RA +  ++   + G++ +R+  + G+  +R    +
Sbjct: 169 RVEGHTDNVPIKTPYFNSNWQLSSIRASNVVEIFATECGLNPNRLLPV-GYGEYRPIATN 227

Query: 325 DPMNSA--NRRIDILVEDRQ 342
                   NRR+DI++ + +
Sbjct: 228 ATEEGRAANRRVDIVILNSK 247


>gi|311695399|gb|ADP98272.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 246

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 2/190 (1%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVK 213
           +      +      +     +     +++     ++R+Q+L +++   +           
Sbjct: 4   EGSASVVNEASPDIESSQIQIEDEVVDELSETLEQRRMQELFQELKEQIKQDETLQEFKD 63

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +L + T  G+ I I+D+   PMFD   +     +  +L ++ + L      +SI GHTD
Sbjct: 64  QLLIDITDEGLRIQIVDRSGRPMFDSGRAELKYYSQDILFELAKTLGSVNNKLSITGHTD 123

Query: 274 ASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
           ++PF       NW LS DRA +A + L+  GV + +I+++ G +   L    DP    NR
Sbjct: 124 STPFSGRPGYTNWELSADRANTARRALVAGGVRQQQIARVVGLSDSVLFDKEDPNAPVNR 183

Query: 333 RIDILVEDRQ 342
           RI I+V +++
Sbjct: 184 RISIIVLNKK 193


>gi|328542518|ref|YP_004302627.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
 gi|326412264|gb|ADZ69327.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
          Length = 343

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 102/344 (29%), Gaps = 26/344 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMAF------FLVMWIINATDDDTKKAIEQYFNP 71
           +        +        + D   T+L+        F++     +     +  +    N 
Sbjct: 5   RVRRRPQGTDYWPG----FVDAMATLLLVIIFLLSIFMLAQFFLSQQLSGRDTVLNRLNA 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L              E +         +    ++ +   +   +            
Sbjct: 61  QISELTELLALERASSRELEDTITTLQASLGEATSERDRLVGLLDDRSGAAAAAGGRAAA 120

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                 ++ +  + +L +     + +        + N           + +       +R
Sbjct: 121 LEGMLDEEKQISQRALAQVELLNQQIAALRRQLAAANAALEASEAKEQESQAKIASLGRR 180

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L     +    LS   +D   +     + R+ I +       ++  +F   S    P   
Sbjct: 181 LNAALVQRVQELSRYRSDFFGRLREILSQRSDIRVVGDRFVFQSEVLFPSGSDEINPAGT 240

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVL 299
           V L K+ E +             V+ + GHTD+ P     R  +NW LS  RA S  + L
Sbjct: 241 VELGKLAEAILELEAQIPEEINWVLRVDGHTDSRPLSGTGRLRNNWELSSARAISVVRYL 300

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +  GV   R+    GF   +     D     + NRRI++ + +R
Sbjct: 301 IDRGVDPKRLVAA-GFGEFQPLEDGDSPEALARNRRIELKLTER 343


>gi|224824155|ref|ZP_03697263.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224603574|gb|EEG09749.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 302

 Score =  120 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQ 231
                    +    + K RL  L KKI S +    V       +  E T  G+ I I+D+
Sbjct: 93  QAGQVKRAREEEIQQEKTRLAKLQKKIESNIEQSAVLKAYKNQLQLEMTPEGLRIQIVDE 152

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSL 289
           +N PMFD  S+  LP T  +LQ++G+ L      +SI GHTDA PF        NW LS 
Sbjct: 153 QNRPMFDSGSANLLPHTRTILQELGKELNGVANRLSISGHTDAKPFGGAQHGYSNWELSA 212

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           DRA +A + L+  G+  D+I ++ G A     I S+  +  NRRI I+V +++
Sbjct: 213 DRANAARRELLAGGLMHDKILRVVGLAAANPLIRSNVFSPENRRIAIVVLNKE 265


>gi|238919361|ref|YP_002932876.1| OmpA family protein [Edwardsiella ictaluri 93-146]
 gi|238868930|gb|ACR68641.1| OmpA family protein [Edwardsiella ictaluri 93-146]
          Length = 270

 Score =  120 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 3/201 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202
           K +L+                  + ++E       +         + RL+ L +++    
Sbjct: 68  KVALSGGQRSSDSFSPIPGGGDDVTRKEGEVRKFAADPDPKTRTDQMRLKRLRERLEQLI 127

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           LS      +   ++   T  G+ I I+D +  PMF   S+   P    +L+ I  +L   
Sbjct: 128 LSDPRLKLLRPHLMINMTDEGLRIQIVDSQKRPMFKNGSAQVEPYMRYILRAIAPILNEL 187

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD  P+ N      NW LS DRA ++ + LM  G+  ++I ++ G A    
Sbjct: 188 PNKISLSGHTDDLPYANGEKGYSNWELSADRANASRRELMAGGLDSNKILRVVGMADTMN 247

Query: 321 KIASDPMNSANRRIDILVEDR 341
                   + NRRI ILV ++
Sbjct: 248 LHNMAGNAAENRRISILVLNK 268



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 68/168 (40%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
                I++KKK +     ++ GSWKI YADFMT +MAFFLVMW++          I +YF
Sbjct: 4   GKQPVILVKKKRSSHAQASHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  ++  +   D  +P      +      +        D K  +   + +  R   
Sbjct: 64  RTPLKVALSGGQRSSDSFSPIPGGGDDVTRKEGEVRKFAADPDPKTRTDQMRLKRLRERL 123

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
               LS+ +      + +   +++G  +      ++ + K  +  + P
Sbjct: 124 EQLILSDPRLKLLRPHLMINMTDEGLRIQIVDSQKRPMFKNGSAQVEP 171


>gi|300697987|ref|YP_003748648.1| Chemotaxis protein motB (Motility protein B), flagellar motor
           protein [Ralstonia solanacearum CFBP2957]
 gi|299074711|emb|CBJ54269.1| Chemotaxis protein motB (Motility protein B), flagellar motor
           protein [Ralstonia solanacearum CFBP2957]
          Length = 314

 Score =  120 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209
            +           +       +       +  I        L  L + I   +    V +
Sbjct: 79  DQSSILQGSPAIKQNMPQPNPSPSPTAQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L      IS+ 
Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFGNASAEVQPYMRTILRELGAALNDVPNPISLS 198

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G         +D  N
Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFN 258

Query: 329 SANRRIDILVEDRQ 342
             NRRI I+V + +
Sbjct: 259 PINRRISIVVLNNR 272



 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +  + S   K ++         +   +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTAQRQRNIRDESDDAA 119


>gi|260892160|ref|YP_003238257.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
 gi|260864301|gb|ACX51407.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
          Length = 268

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 8/211 (3%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           S     +    +       G       + +            P    K       +    
Sbjct: 38  SKIDAEKFAGIAEALARALGGGAGMILEGQGPAVVSGAPKFEPGEDAKFALSGGGEENLQ 97

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L K  +          +   +       G+++S++D     +F   S+   P+   V+++
Sbjct: 98  LEKIKAEIEKYAREKGLQAKITARIEERGLVVSVLDT---VLFPIGSAELTPQAKEVVRE 154

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312
           +G++L      + I GHT   P        NW LS+ RA S  Q L+ +      R+   
Sbjct: 155 VGKILLKMPNCVRIEGHTCDLPIHTPRYPSNWELSVARATSVVQELIHTVNFPPQRLCAC 214

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            G+A +R  + +D       NRR+D +V   
Sbjct: 215 -GYAEYRPLVPNDSEEHRQMNRRVDFVVLRS 244



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             + T  +   W I YAD +T+L+ FF+V++  +  D +    I +      + L   + 
Sbjct: 5   KRELTEASRERWLITYADLITLLLIFFIVLYTFSKIDAEKFAGIAEAL---ARALGGGAG 61

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            I + Q P   S   K +   D     +    +
Sbjct: 62  MILEGQGPAVVSGAPKFEPGEDAKFALSGGGEE 94


>gi|308071044|ref|YP_003872649.1| flagellar motor protein [Paenibacillus polymyxa E681]
 gi|305860323|gb|ADM72111.1| Flagellar motor protein [Paenibacillus polymyxa E681]
          Length = 271

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 87/314 (27%), Gaps = 65/314 (20%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
           +   W I YAD +T+L+ FF+VM+ +++ D      + Q          +       EQ 
Sbjct: 17  HRDRWMITYADLITLLLIFFVVMYAMSSLDAKKYDVVVQSLQDTFHKGDS-----ILEQG 71

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
                + ++          + + D K   + +  + ++          +      +    
Sbjct: 72  SGITGTADRYTSKNPPTTKQPAADKKEAGSTKLTEREQAFRTQEKELQNLMGVIQEYITD 131

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E    +            +   F    +  K  +     +L  L + + +       
Sbjct: 132 NKLENQIFVSDQPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLKTP------ 185

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                            ISI    +   F +SS+                          
Sbjct: 186 -----------------ISIEGHTDNIPFTRSSNSST----------------------- 205

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
                        +DNW LS  RA S  +  +          + +G+A  R    +    
Sbjct: 206 ------------YKDNWELSGARALSVLRFFLDREQLSPSGFQYAGYADTRPVGDNSTEA 253

Query: 329 SA--NRRIDILVED 340
               NRR++I V  
Sbjct: 254 GRQKNRRVEITVLR 267


>gi|254500358|ref|ZP_05112509.1| OmpA family protein [Labrenzia alexandrii DFL-11]
 gi|222436429|gb|EEE43108.1| OmpA family protein [Labrenzia alexandrii DFL-11]
          Length = 344

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 108/344 (31%), Gaps = 26/344 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +        +        + D M  L+   + +  I               +     L  
Sbjct: 6   RSRRRAQQTDYWPG----FVDAMATLLLVIIFLLSIFMIAQFFLSQQLSGRDTVLNRLNA 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               + +       SS    D  +    + +S + +        +    +        +Q
Sbjct: 62  QISELTELLALERASSGELEDTILGLQASLSSAEAEQSRLLGLLESSSGDAEAAGGRAAQ 121

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                 +      E    +        ++ ++       L   +    + + ++  L ++
Sbjct: 122 LENLLDDERQVSQEALAQVELLNQQIAALRRQIAAANAALEASEAKEAESQAKIASLGRR 181

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------RNTPMFDKSSSIPLPETI 249
           +++ L   V +       F      IL    D          ++  +FD  S    PE  
Sbjct: 182 LNAALVQRVQELSRYRSDFFGRLREILSQRSDISVVGDRFVFQSEVLFDSGSEDINPEGQ 241

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVL 299
             L K+ E +             V+ + GHTDA P     R  +NW LS  RA S  + L
Sbjct: 242 QELDKLAEAILELSGQIPDEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYL 301

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           ++ GV   R+    GF   +    S+  +  + NRRI++ + +R
Sbjct: 302 IEKGVDPKRLVAA-GFGEFQPLEESETPDALAKNRRIELKLTER 344


>gi|225849649|ref|YP_002729883.1| flagellar motor protein MotB [Persephonella marina EX-H1]
 gi|225645473|gb|ACO03659.1| flagellar motor protein MotB [Persephonella marina EX-H1]
          Length = 231

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+    K+   L+ L       G+  E  + G +I         MF   S+ P  E + 
Sbjct: 82  KLKKKRNKLQKDLNRLEQLLEKAGIEAEVEKHGSIIRFRLNTER-MFPSGSATPYKEVVP 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L ++ + L  +   I+I GHTD +P     + N  LS +RA S  ++    G   DR+ 
Sbjct: 141 LLLEVCKRLKETQFPITIEGHTDNTPI--RFKSNLELSAERALSVLKLFKSCGY-PDRLL 197

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              G+  +R  + +D     + NRRI+I+++  
Sbjct: 198 SARGYGEYRPLVPNDTPENRAKNRRIEIVIDTS 230


>gi|332291754|ref|YP_004430363.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169840|gb|AEE19095.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 471

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 16/304 (5%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +W+    +   +   +  F   G         I       +       D         
Sbjct: 171 VKIWLGENINVGVQSKYKHAFEDEGIKHFQHVAAIGIVFGGKDTDGDGIYDKEDACPEVA 230

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
              +      +     +  ++    ++   + + C ++        KD C +     ++ 
Sbjct: 231 GLPEFNGCPDSDGDGIEDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACPTVAGVAALG 290

Query: 169 KEENYFLPPLSKEKILAMKRKK---------RLQDLAKKISSTLSGLVADNIVKGVLFET 219
              +     +                       +D    +            V       
Sbjct: 291 GCPDADGDGIKDADDACPNEAGPRSNNGCPFEDKDGDGVLDKDDECPDVAGTVANNGCPE 350

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278
               +L  +  +    +FD + +    E+   L K+  V+         I GHTD     
Sbjct: 351 VSVEVLNELNLETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRFLIEGHTDDR--- 407

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA S    L   G+   R+    GF   R   ++        NRR+++
Sbjct: 408 GRDAYNLDLSDQRAASVRSYLTGKGIPAARLES-KGFGEARPVASNKTAAGRQENRRVEL 466

Query: 337 LVED 340
            + +
Sbjct: 467 SILE 470


>gi|332520949|ref|ZP_08397409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332043479|gb|EGI79675.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 442

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 28/270 (10%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +      GI +    P+    + ID             ++    N         +    
Sbjct: 198 VDACPDLFGIIEANGCPDADGDSVIDSEDLCPNDFGPTTMRGCPDNDGDGTPDKYDKCPT 257

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           +  +   + C    T          K          +    +    +++ LA   +++  
Sbjct: 258 VKGAINDDGCPRIDTDGDGIDDRFDKCPKQPGVKENQGCPKVLTPQEKQQLANLERQKNL 317

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           D   KI   ++  + +     V                     F+   +   PE    L 
Sbjct: 318 DRNAKIKQQVTNDINNYCKAIV---------------------FNYGKTSLSPEGKKALD 356

Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +I +++     +   + GHTD          N  LS  RA S    L+  G+S  R++  
Sbjct: 357 EIYKIMNLQKNMKFHVTGHTDNV---GSKATNLALSEKRAASVKNYLITKGISNSRVTS- 412

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVED 340
            G+        +        NRRI+I + +
Sbjct: 413 QGYGEENPIADNSTNEGRIKNRRIEIYITN 442


>gi|83747601|ref|ZP_00944638.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
 gi|207738644|ref|YP_002257037.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
           IPO1609]
 gi|83725781|gb|EAP72922.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
 gi|206592012|emb|CAQ58918.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
           IPO1609]
          Length = 314

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 3/201 (1%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTL 203
                  ++   L  S  +++++ +      P + +++          L  L + I   +
Sbjct: 72  FGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAALNKLKQHIMEMI 131

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
               V +     +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L   
Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGSALNDV 191

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              IS+ GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G       
Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251

Query: 322 IASDPMNSANRRIDILVEDRQ 342
             +D  N  NRRI I+V + +
Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272



 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +  + S   K ++         +V  +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAA 119


>gi|163786812|ref|ZP_02181260.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
 gi|159878672|gb|EDP72728.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
          Length = 465

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 85/269 (31%), Gaps = 23/269 (8%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +      G+      P+  +    D   D   T    +               ++    +
Sbjct: 217 DACPEEAGLEIFNGCPDSDNDGIQDSKDDCPNTAGLAEFNGCPDGDGDGVMDKDDKCPTV 276

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +  +    C ++       G D C +     + N                       L  
Sbjct: 277 AGLKNLMGCPDADGDGVADGSDNCPNESGPAANNGCPWPDTDGDGI-----------LDK 325

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
             K  +    G+ A+N    V        ++ ++     + +FD   +    ET  VLQ 
Sbjct: 326 DDKCPNEA--GVAANNGCPEVK---PTAEVVETLNTYARSILFDTGKASFKKETDQVLQA 380

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +     +   SI GHTD+         N  LS  RA +    L+ +G+S DR++   
Sbjct: 381 MVAIFKEYPKADFSIEGHTDSV---GSKSTNQALSDRRANAVRDYLIANGISADRLTAA- 436

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVED 340
           G+        +        NRR+++ +++
Sbjct: 437 GYGEDNPIANNKTRAGRKENRRVEVKLKN 465


>gi|168334555|ref|ZP_02692711.1| flagellar motor protein [Epulopiscium sp. 'N.t. morphotype B']
          Length = 251

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P  +++  A   K+   ++          L ++ +   V  E     ++++  D     +
Sbjct: 81  PEEEDRKAAENIKQITIEMENIKEELDKFLKSEGLDNKVTVEQDGEEVVLTFED---FML 137

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI---RGHTDASPFRN-IARDNWRLSLDRA 292
           FD   ++  P+ + VL KIG  +    E   I    GHTD  P  + I   NW LS  RA
Sbjct: 138 FDSGLAVIKPDGLEVLGKIGNEIKQYLEDDYIARAEGHTDNLPINSLIFPSNWELSASRA 197

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            S  + L+   G+S  RIS   GF        +D     + NRR++I +   
Sbjct: 198 ISVAKYLINDIGISPMRISA-EGFGEFYPIATNDTPEGRAQNRRVEIKIAKD 248



 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 47/129 (36%), Gaps = 2/129 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   ++ P    +W   ++D MT+L+ FF++++ +++ D     A    ++     +  
Sbjct: 3   KKKKEEEAPAGAPAWMATFSDLMTLLLCFFVLLFSMSSLDIAKFTAFINSYSGSTGIIDG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +    N         +    D    +N   + I   N K++  +   +    +   
Sbjct: 63  GE--VLLNSNGMLGGGVENVPEEEDRKAAENIKQITIEMENIKEELDKFLKSEGLDNKVT 120

Query: 139 QSEHCKNSL 147
             +  +  +
Sbjct: 121 VEQDGEEVV 129


>gi|83647833|ref|YP_436268.1| flagellar motor protein MotD [Hahella chejuensis KCTC 2396]
 gi|83635876|gb|ABC31843.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
          Length = 260

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +   +      + +  P     +    +  +RL+++A + +  L GL+   +   V 
Sbjct: 71  QQTAAPPQSDAPAIQPFNSPEDPAGETSEEQAGERLREIANRFNYRLKGLIGQGM---VS 127

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
                  I +S+   RN  +F+   ++P+     ++  I  +L      I + G TD  P
Sbjct: 128 INENDNWIELSL---RNNLLFNSGDAVPVDAAFNLIDGIAGILKDYPNAILVEGFTDNVP 184

Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
            R+ A   NW LS  R+ +  ++L+  GV   R++ + G+  ++    +D       NRR
Sbjct: 185 IRSSAYPSNWELSSARSAAVARLLIIGGVDPRRLAAV-GYGEYQPVARNDTSEGRQRNRR 243

Query: 334 IDILVEDR 341
           + +LV   
Sbjct: 244 VVLLVAKD 251



 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 41/105 (39%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++K+    +  +N   W + YADF+T+L AFF+VM+ +++ ++   K + +         
Sbjct: 1   MRKRRRNREESHNHERWLVSYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLEGVFNAT 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
             +   I   Q        +   +         + +       ++
Sbjct: 61  QRSVNPIQVGQQTAAPPQSDAPAIQPFNSPEDPAGETSEEQAGER 105


>gi|323706054|ref|ZP_08117624.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534668|gb|EGB24449.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 241

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             +A ++   +      N+   V ++    G +IS+ D     +FD  S+   P+    L
Sbjct: 87  NSIASQLDKLIKQY---NLQNMVTYKVDERGFVISLNDTL---LFDTGSADVKPDQKETL 140

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
            KIG +L      I + G+TD  P  N     NW LS+ RA +  ++L+    +   +IS
Sbjct: 141 IKIGNILKSMPNYIRVEGYTDNVPINNNQFHSNWELSVIRATNVVEILVNDVKMDPAKIS 200

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + G+  +R  + +D       NRR+DI++ +
Sbjct: 201 AV-GYGEYRPIVPNDSDKNRQLNRRVDIVIMN 231



 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
          +    +    N   W + Y+D +T+LM FF+V++ I+  +    + I        
Sbjct: 3  RHEEDEGKKENSERWLLTYSDMITLLMIFFIVLYTISTVNSQKFQQIAASLGKTF 57


>gi|292493578|ref|YP_003529017.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291582173|gb|ADE16630.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 279

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 10/229 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S+  + +Y+ L  ++  +            +              +   +I         
Sbjct: 38  SSVNEGKYRVLSESLTAIFPQASRRIEPIEVGGPGVVSGSSPIEIEALPAIPSSAQTLGI 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                          L+ + +++  TL  L+ +++   V     +  + + I D+    +
Sbjct: 98  SFPSAATQEHSAMTSLKAITEEVRITLQPLIDEDL---VRLRQGQEWLEVEINDR---VL 151

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           F   S+    E + VL+K+ ++L      I + G TD  P        NW LS  RA S 
Sbjct: 152 FTSGSAKLEAEAVPVLKKLAKILRRFPNPIQVEGFTDNVPISTAVFPSNWELSSARAASV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
             +  + GVS  R++ I G+  +R    +        NRR+ +++  R 
Sbjct: 212 VHLFDRFGVSPARMAAI-GYGQYRPVADNSTPEGRRRNRRVALVILGRP 259


>gi|291519587|emb|CBK74808.1| Flagellar motor protein [Butyrivibrio fibrisolvens 16/4]
          Length = 313

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 110/325 (33%), Gaps = 35/325 (10%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   ++ P    +W   ++D M +L+ FF++++ +++TD +  + +            +
Sbjct: 3   KKQKQEEAPAGSPAWMATFSDLMNLLLCFFVLLFSMSSTDTEKFQEVIASIQSSFSIFSS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               I + Q      S                          + +         +  + Q
Sbjct: 63  GGTSIGEGQMISSGIS--------------------------QLEMFDDYFKSVHDGDDQ 96

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           + E    + T++  +  +    T+  ++ +   +     +S  +      +    +    
Sbjct: 97  KYEKEGATDTQNEGEQSEDGNQTEEGQNPSDVSSESGEDISVAEAKEALEEAGASESENI 156

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                  L    +   V  +     ++I+I       +F+   +I   + + ++  +  +
Sbjct: 157 AEEIEEKLALYGLQDQVEVDFNANYVMITIN---GALLFNSGKAILTEDALEIVDNLSNI 213

Query: 259 LAHS-TEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           LA     +I I GHTD  P       +N  LS+ RA      + +   ++   I    G 
Sbjct: 214 LASYNQNIIEIEGHTDNVPMSSGTYENNDVLSMYRALYVADRIREKTNLNPAYIKSA-GR 272

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
             +     +      + NRR++I +
Sbjct: 273 GEYVPIADNSTAEGRARNRRVEIKI 297


>gi|254519411|ref|ZP_05131467.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
 gi|226913160|gb|EEH98361.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
          Length = 246

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 8/210 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  +   + + +  +     +              N  +P +  E    ++  + L +  
Sbjct: 37  SMATVDAEKTKSISNAFTSMMSGQNGDSIMEYNMYNGEVPLIGGETEDNIEGGESLTEQE 96

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K   +    +  +N+   V     + G++I + D     +F+ SSS    E+  VL KI 
Sbjct: 97  KMYKNVKEFVNENNLGSVVDIIDNKRGVIIQLRDN---VLFETSSSDLREESKEVLNKIN 153

Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            ++A     I + GHTD  P        NW LS DRA +  +  ++  G    R S   G
Sbjct: 154 SLIASIDNQILVEGHTDNRPINTSRFPSNWELSADRAVNVVKYFIEVMGQDPSRFSAA-G 212

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +  +     +D     + NRR+DIL+   +
Sbjct: 213 YGEYHPVAPNDTYENMAKNRRVDILIVTTE 242



 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 2/94 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K            W   YAD +T+L+ FF++++ +   D +  K+I   F         
Sbjct: 3   RKKKNKAEGLRGDEWMATYADTVTLLLTFFVLLYSMATVDAEKTKSISNAFTSMMSGQNG 62

Query: 79  ASKGIFDEQNP--PERSSQNKIDLSIDEHITKNS 110
            S   ++  N   P    + + ++   E +T+  
Sbjct: 63  DSIMEYNMYNGEVPLIGGETEDNIEGGESLTEQE 96


>gi|268590004|ref|ZP_06124225.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
 gi|291314723|gb|EFE55176.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
          Length = 305

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)

Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           R + L + +   +      + +   +L +    G+ I I+D  N PMF   S+   P   
Sbjct: 112 RFEKLKESLEQAILKDPRLNELKPHLLIDMINDGLRIQIVDSENRPMFKVGSATVEPYMR 171

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L+ I  +L      ISI GHTD   +       NW LS DRA ++ + L++ G+ E++
Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLAYANGANYSNWELSSDRANASRRELIRGGMDENK 231

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + ++ G A        D     NRRI I+V + +
Sbjct: 232 VLRVVGMASAIHLDKEDGFAPINRRISIIVLNDE 265



 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 12  DQFIIIK-KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   +I+ KK +      + GSWKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 4   NTPHVIRVKKRSSHHQNGHGGSWKIAYADFMTAMMAFFLVMWLISISSPQELTQIAEYFR 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
                 +       D  NP     ++ I    D     N++
Sbjct: 64  TPLSTAINPGSKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104


>gi|45600818|gb|AAS70302.1| motility protein B [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 266

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           TK+S   K      +KQ ++  + I  L    + E        ++ + +   K +DLE  
Sbjct: 35  TKSSNKEKELIDENEKQSKKFRDLIDGLKEDLERERENCQKKTEALQKEYERKISDLESR 94

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I    +     +SK K L+  +KK L  L+ + +   + L  +     +  +     ++I
Sbjct: 95  ILVLNDE----ISKLKHLSENQKKELDRLSDQANELENKLTDEIKKGQIRLKRFHDRLVI 150

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-N 284
           +I D+     FD  S+    + +  L KI E+L +    +I I GHTD  P R      N
Sbjct: 151 NIDDK---ISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFSDN 207

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           W+LS +RA S     ++S + + R   ++G+   +  +++D     + NRR+DI+V  R
Sbjct: 208 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 266


>gi|17549629|ref|NP_522969.1| flagellar motor protein MotB [Ralstonia solanacearum GMI1000]
 gi|17431883|emb|CAD18561.1| probable chemotaxis (motility protein b) transmembrane [Ralstonia
           solanacearum GMI1000]
          Length = 314

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209
            +           +       +       +  I        L  L + I   +    V +
Sbjct: 79  DQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L      IS+ 
Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLS 198

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G         +D  N
Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFN 258

Query: 329 SANRRIDILVEDRQ 342
             NRRI I+V + +
Sbjct: 259 PINRRISIVVLNNR 272



 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +  + S   K ++         +V  +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAA 119


>gi|188586029|ref|YP_001917574.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350716|gb|ACB84986.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 269

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 11/183 (6%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            +    I +E+     P   E+ +  + ++ ++D+  ++   +      ++ + V+ ET 
Sbjct: 68  PEHRAQIPREDPNITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDA---DLAEVVMLETE 124

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
             GI+I   D+    +FD   +    E++ +L  I E+L      I + G TD  P    
Sbjct: 125 ERGIVIRFQDK---ILFDSGRAELRSESLEILGDIAEILEEIPNEIKVEGFTDDVPIDTP 181

Query: 281 AR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
               NW LS  RA +  + L  + G+   R+   +G+  +R  + +D       NRR+DI
Sbjct: 182 EFPSNWELSAARATTVLRYLSEEGGLDPGRLQA-TGYGEYRPMVPNDSPENRQLNRRVDI 240

Query: 337 LVE 339
            V 
Sbjct: 241 TVL 243


>gi|312877226|ref|ZP_07737195.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796035|gb|EFR12395.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 257

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
              K   M  ++ + D+ K+I   +     +     VL      G+ I + D     +FD
Sbjct: 89  GATKNKQMTEEELINDIQKQILGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296
             S+   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA S  
Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201

Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           Q  L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|89889933|ref|ZP_01201444.1| putative outer membrane protein, ompA family [Flavobacteria
           bacterium BBFL7]
 gi|89518206|gb|EAS20862.1| putative outer membrane protein, ompA family [Flavobacteria
           bacterium BBFL7]
          Length = 457

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 82/272 (30%), Gaps = 25/272 (9%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS-TNQKKQYQRLENNIF 132
           K+   +  G+      P+       D   +        +      T+      + +N + 
Sbjct: 206 KDACPSVAGLEQFMGCPDSDGDGIEDSKDNCPNAAGPAESMGCPDTDGDGTLDKDDNCVN 265

Query: 133 YLSNSQQSEHCKNSLTRDSE-KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
               +  +         D     KD CK+     S N            +          
Sbjct: 266 EAGPAYNNGCPDPDTDGDGVVDSKDNCKTVKGPASNNGCPADRDNDGVIDADDKCPDTPG 325

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +  LA         +                     +     T +FD   +    E+  V
Sbjct: 326 IASLAGCPKPAAPTVEEQE----------------QLNQYAKTILFDTGKATIKAESAKV 369

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  I  +L        SI GHTD+      A+ N RLS  RA      L+ +G+ E R+S
Sbjct: 370 LSDITAILKKYPTAKFSIDGHTDSV---GSAKLNQRLSDSRANEVKNYLVANGIDEFRLS 426

Query: 311 KISGFAHHRLKIAS--DPMNSANRRIDILVED 340
            + G+   R    +      + NRR++I + +
Sbjct: 427 SV-GYGEARPVADNKTKTGRAQNRRVEINLVN 457


>gi|90422320|ref|YP_530690.1| hypothetical protein RPC_0800 [Rhodopseudomonas palustris BisB18]
 gi|90104334|gb|ABD86371.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 341

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 97/338 (28%), Gaps = 16/338 (4%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    D   N    +    +  +     L++ FLV+    + +   K    Q  N     
Sbjct: 5   RGRRNDPGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVTGKDKALQELNAKLAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L          +   E                ++ +                       +
Sbjct: 65  LNDLLSLEKLGKLNLEDQLSQLRAGLASSESERDRIKGLYDGLAGAGNDAAGRAGELNKA 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              + +    +L +     + +        ++    +       + +       +RL   
Sbjct: 125 LDSEKQLSARALAQVEVLNQQISALRRQLAALEAALDASEQRGKESQSRIADLGQRLNVA 184

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +    LS   ++   +       R  I I        +   FD   +   PE    L 
Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFESEVFFDTGQAQLKPEGRAELD 244

Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           K+   L        A    V+ + GHTD  P     + NW LS  RA S  Q L+  GV 
Sbjct: 245 KLASALIDLDKKIPAEIAWVLRVDGHTDVRPITGAFKSNWELSSGRAISVVQYLVSLGVP 304

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             R+    GF   +    +    +   NRRI++ + +R
Sbjct: 305 PQRLVAA-GFGEFQPLDVAATEEAYKRNRRIELKLTER 341


>gi|325286152|ref|YP_004261942.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321606|gb|ADY29071.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 452

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 82/280 (29%), Gaps = 16/280 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F  +         G+  +    +       D                         +  +
Sbjct: 173 FEDYSVKHFQHLAGLAIKFGGADTDGDGVYDKDDACPEVAGLEAFNGCPDADGDGIEDSK 232

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +     + S++   C ++         D C +     ++N   +     ++ +       
Sbjct: 233 DACPNEAGSKEMNGCPDADGDGIADKDDACPNEAGTAALNGCPDADGDGVADKDDKCPSE 292

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDK 239
                +            V D   K                   +   + D   T +FD 
Sbjct: 293 AGPAANNGCPWEDKDKDGVLDKDDKCPEVAGTVANNGCPEVTEEVQKKLNDYARTILFDT 352

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S    E+  V+  I  +L        ++ GHTD+      A  N +LS  RA S  + 
Sbjct: 353 GKSSIKAESTAVMVDIITILKEYPNAKFTVEGHTDSV---GSATLNQKLSESRALSVKEF 409

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           L++ G+ E R+S + G+   +    +        NRR++I
Sbjct: 410 LVEKGIGEFRLSAV-GYGEDKPIATNKTRAGRKQNRRVEI 448


>gi|330960099|gb|EGH60359.1| flagellar motor protein MotB [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 341

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAIAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIKSVPNKISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|300853354|ref|YP_003778338.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
           13528]
 gi|300433469|gb|ADK13236.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
           13528]
          Length = 283

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 8/174 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +   ++      + K     L +      S L A+ + + V  +    G+++S+    
Sbjct: 77  KTVDKPTESDQSEEQVKMEANKLKQLKKQVDSYLAANGLSQSVSSQIDERGLVVSL---S 133

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291
           NT  FD   +   PE    L  IG+++      I + GHTD  P  N     NW+LS  R
Sbjct: 134 NTLFFDTGKAEIKPEIQNTLMGIGKMINQMGNSIRVEGHTDNVPISNNEYASNWQLSCAR 193

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A +  Q L    G+  ++++ + G+  +R    +      + NRR+DI++E  +
Sbjct: 194 AANVTQFLQNKVGIKPEKLTSV-GYGEYRSVTDNSTDANRAKNRRVDIIIESNK 246



 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +KKK    D   +   W + YADFMT+LM FF+VM+ ++  D      + Q         
Sbjct: 1   MKKKNKKPDEGPSAERWMLSYADFMTLLMIFFVVMYAMSQVDQTKYNKLSQSL----SIA 56

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           M   K I    N        K      E      
Sbjct: 57  MGGGKTIIGADNTSSVKDSVKTVDKPTESDQSEE 90


>gi|237798269|ref|ZP_04586730.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021121|gb|EGI01178.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 346

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVQTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDA 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|220932514|ref|YP_002509422.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
 gi|219993824|gb|ACL70427.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
          Length = 245

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q   K +      +  + +   V  E T+ G+++ +       ++D   +   P    +L
Sbjct: 88  QVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLT---GQVLYDIGKAEIKPGGKRLL 144

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
            +I  ++      I++ GHTD  P  N     NW LS  RA +  +  ++  G+   R+S
Sbjct: 145 DEIAGIIEKIPNEIAVEGHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLS 204

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVED 340
              G++ +R    +D +   + NRR++I++ +
Sbjct: 205 AA-GYSEYRPLYPNDTVEHRAKNRRVEIVILN 235



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   ++  N    W + Y D MT+L+ FF+ ++  +  + +  +            +M 
Sbjct: 5   KKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQ-AKLGVMP 63

Query: 79  ASKGIFDEQNPPERSSQNKIDLS 101
             K I DE+     S  N+ + S
Sbjct: 64  GGKTIMDEELLSRGSIGNRFNPS 86


>gi|299069796|emb|CBJ41076.1| Chemotaxis protein motB (Motility protein B), flagellar motor
           protein [Ralstonia solanacearum CMR15]
          Length = 314

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209
            +           +       +       +  I        L  L + I   +    V +
Sbjct: 79  DQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L      IS+ 
Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLS 198

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G         +D  N
Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMQPEKVARVVGLEASVPLDKTDAFN 258

Query: 329 SANRRIDILVEDRQ 342
             NRRI I+V + +
Sbjct: 259 PINRRISIVVLNNR 272



 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +  + S   K ++         +V  +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAA 119


>gi|187478167|ref|YP_786191.1| flagellar motor protein MotB [Bordetella avium 197N]
 gi|115422753|emb|CAJ49281.1| chemotaxis protein [Bordetella avium 197N]
          Length = 324

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 3/195 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL-SGLVAD 209
           +E        +D  +S  +        +  +     + + RL+ L +++ + + +  V  
Sbjct: 78  AETSAIPGGGSDPLRSKGEVRRADGNRVEAQPDADRRDRHRLESLKRRLEAVIDNSPVLK 137

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N    +L + T  G+ I I+D +N PMF   S+   P    +L+++G VL      +SI 
Sbjct: 138 NFRPQLLIDLTTEGLRIQIVDSQNRPMFATGSAQVQPYMRDILRELGPVLNDLPNKVSIS 197

Query: 270 GHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTDA+ +  R  A  NW LS DRA ++ Q L+  G++E ++ +I G A     +  DP 
Sbjct: 198 GHTDATQYARRERAYSNWELSTDRANASRQELVAGGMTEGKVMRIQGLASSMSIVKDDPY 257

Query: 328 NSANRRIDILVEDRQ 342
            + NRRI ++V + +
Sbjct: 258 AAVNRRISLVVLNEK 272



 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 49/110 (44%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           ++ ++       ++ GSWKI YADF+T +MAFFLVMW+++    +  K I  YF    + 
Sbjct: 9   VVVRRKRSSAKAHHGGSWKIAYADFITAMMAFFLVMWLVSIVPREELKGIADYFRMPLRV 68

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            +T       E +       + +    +      +        +++ +++
Sbjct: 69  ALTGGPNSSAETSAIPGGGSDPLRSKGEVRRADGNRVEAQPDADRRDRHR 118


>gi|116253762|ref|YP_769600.1| hypothetical protein RL4023 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258410|emb|CAK09513.1| putative chemotaxis protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 343

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 99/315 (31%), Gaps = 15/315 (4%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +  L+  F+V   I + +   +  +    N     L              + S  N    
Sbjct: 30  IMFLLTVFVVGQFILSREITGRDEVLSRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                  ++ +   + + +  +   +           +Q +  + +L++     + +   
Sbjct: 90  LASAEGDRSRLQALLNAGSGGQDAAQKRIGSMTQELDEQKQVSERALSQVELLNQQIAAL 149

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                ++              +        RL          L+   +D   +     + 
Sbjct: 150 RRQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209

Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270
           R  I I       ++  +F    +   PE    + K+   L             V+ + G
Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAKLAAALLDLAKEIPPEINWVLRVDG 269

Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           HTD  P       RDNW LS  RA S  + L+  GV  DR+    GF   +     D  +
Sbjct: 270 HTDNVPLGGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGDTPD 328

Query: 329 SA--NRRIDILVEDR 341
           +   NRRI++ + ++
Sbjct: 329 ARSTNRRIELKLTEK 343


>gi|254438344|ref|ZP_05051838.1| hypothetical protein OA307_3214 [Octadecabacter antarcticus 307]
 gi|198253790|gb|EDY78104.1| hypothetical protein OA307_3214 [Octadecabacter antarcticus 307]
          Length = 275

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 65/333 (19%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           ++ N   IIIK+K  I    ++ G+WK+ YADF+T +MAFF +M  +     + ++    
Sbjct: 5   DKANAPVIIIKRKKVIAGGGHHGGAWKVAYADFVTAMMAFF-LMMWLLNATTEQQR---- 59

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
                        KG+ D   P    S+           T                    
Sbjct: 60  -------------KGLADYFAPTITVSRVSGGGEGMFGGT-------------------- 86

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N +   +  Q        +  D +                          ++E    + 
Sbjct: 87  -NMMSDDALVQDGTGQSGGVPIDGDLV-----------------------GTQESAAEVA 122

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             + ++ L   I      LV    ++ V+   T  G++I +  + + P+F   S+ P P 
Sbjct: 123 ALQEVEALLLGIGG--ESLVQQEALRHVVTRVTDEGLIIEVFARDDAPLFISESTEPAPV 180

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            I +           T  ++I GHT   P     R  W +S  RA +  ++L   G+   
Sbjct: 181 LIELTTMFARTFDLVTNPVAIEGHTRTRPLVIAERPVWDISTGRAETVRRLLEAGGLDSL 240

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           RI++I+G A        + ++  N RI+I++  
Sbjct: 241 RIARITGNADRD-LARVEALSVRNNRIEIILLR 272


>gi|126417355|gb|ABO13880.1| MotB [Ralstonia solanacearum]
          Length = 314

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 3/201 (1%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTL 203
                  ++   L  S  +++++ +      P + +++          L  L + I   +
Sbjct: 72  FGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAALNKLKQHIMEMI 131

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
               V +     +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L   
Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYLRTILRELGAALNDV 191

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              IS+ GHTDA+ +       NW LS DRA ++ + L+  G+  ++++++ G       
Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251

Query: 322 IASDPMNSANRRIDILVEDRQ 342
             +D  N  NRRI I+V + +
Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++       ++E Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           F    K  +    G  D+ +  + S   K ++         +V  +    ++     
Sbjct: 63  FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAA 119


>gi|71906384|ref|YP_283971.1| flagellar motor protein MotD [Dechloromonas aromatica RCB]
 gi|71846005|gb|AAZ45501.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 257

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 7/165 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +K+   K+ ++ Q +       +  L        V    T  G+ I I D     +F   
Sbjct: 86  DKLPDQKKIEQRQKMKNMAGDIMQALQPLVAQGKVRLLETSRGVTIEINDS---ILFPAG 142

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299
            +     +I  +  I +VLA S   I+I GHTD  P        NW LS  RA +  ++ 
Sbjct: 143 QAKLQSASISAMLAIAQVLAASDFPITIEGHTDNVPIATAQFPSNWELSAMRATTVLRLF 202

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              GV  +R++ I G+   R    +      + NRR+ IL++  +
Sbjct: 203 NDGGVGAERLTAI-GYGETRPLETNTTVEGRARNRRVSILIDSNR 246



 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 48/150 (32%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + YADF+T+L AFF+VM+ I++ ++   K +        KN+     G          
Sbjct: 16  WLVSYADFITLLFAFFVVMYAISSVNEGKYKVLSNSLTNAFKNVTGQPGGQPIAVIQGAP 75

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
               +     D+   +  ++ +    N      +    +      +  E  +      ++
Sbjct: 76  PIPPRPIAKPDKLPDQKKIEQRQKMKNMAGDIMQALQPLVAQGKVRLLETSRGVTIEIND 135

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                     L+ +           L+   
Sbjct: 136 SILFPAGQAKLQSASISAMLAIAQVLAASD 165


>gi|330978961|gb|EGH78020.1| flagellar motor protein MotB [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 346

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVQTTPSP-------------DTVPIEAENAETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDHQNPTNPINRRIDIVVLTKK 273


>gi|78221681|ref|YP_383428.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78192936|gb|ABB30703.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 267

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 8/207 (3%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E    +  + S     +  STD+        +      S+ + +  + +   +D     +
Sbjct: 54  ESFGFTTIQGSAAKPVVIDSTDMRIIPTITPDLINKGRSQGQKMGGRARAEEKDFRAIKA 113

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  + LV       V    T+ G+++S+ +      FD  S+I       +L K+ E LA
Sbjct: 114 AMEAYLVKQGAQAKVSVGITQRGLVVSLKEA---GFFDSGSAIVRESAYPLLAKVAESLA 170

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
             +  + + GHTD  P  +     NW LS  RA +    L K        IS   GF  +
Sbjct: 171 GYSNAVRVEGHTDTMPISSPLFPSNWELSTARATNIVHFLTKSYDFQPSAISAA-GFGEY 229

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQG 343
           R    +        NRR+DI++   +G
Sbjct: 230 RPIADNATAEGRSKNRRVDIVLLSGEG 256


>gi|121533429|ref|ZP_01665257.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307988|gb|EAX48902.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
          Length = 262

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 79/193 (40%), Gaps = 11/193 (5%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                 +       + K            +   M    +L +L K++   ++     N+ 
Sbjct: 69  TVPYAAEGPPQMPILPKTPPVVSSMSGTNEHAYMMETVQLIELKKQLDRYIAES---NLA 125

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             +    T  G++I I D     +F    +   PE++ +  +I  ++A  ++ + + GHT
Sbjct: 126 GDIQTALTDDGLMIRIKDT---ALFASGRAELKPESLRLGTEIARMIAPLSQRVIVAGHT 182

Query: 273 DASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           D  P        NW LS  RA +    +L ++ +  +RI  +SG+  +R   ++D     
Sbjct: 183 DNMPINTPEFPSNWDLSTKRALNFMKYMLSQAEIKPERI-SVSGYGEYRPVASNDTEEGR 241

Query: 329 SANRRIDILVEDR 341
           + NRR+++L+   
Sbjct: 242 AKNRRVEVLIMRS 254


>gi|319651875|ref|ZP_08005999.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
 gi|317396434|gb|EFV77148.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
          Length = 246

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 8/174 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P   E+I       +L  L + +    S L  + + K ++   T  G+++ + +Q 
Sbjct: 67  PAENPEQNEEIKENGDSGQLDSLDELLMEIQSFLDENGLEKVIVANRTERGVVLVLQEQ- 125

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291
              +F+   +  +  +   L K+G +LA+   ++ + GHTD  P        NW LS  R
Sbjct: 126 --VLFESGDASLIDSSYSFLDKVGTLLANMPNLVKVEGHTDDRPITTYRYPSNWELSAAR 183

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           A +  + L  K  +   R   + G+   R  + +        NRR++I++ D +
Sbjct: 184 ASTVIRYLTEKHNLDSHRFMAV-GYGETRPIVPNSGPENWEKNRRVEIIISDPK 236



 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K +    + P     W + ++D +T+++ FF++++ ++  D    +A+   F       
Sbjct: 1   MKPRRRSPEPPKGSPRWMVTFSDLVTLILVFFILLFSMSQIDLMKFQALSDSFRDRQVLD 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSID 103
              S    +     E   +N     +D
Sbjct: 61  FQPSIIPAENPEQNEEIKENGDSGQLD 87


>gi|284041524|ref|YP_003391864.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
 gi|283945745|gb|ADB48489.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
          Length = 290

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 71/315 (22%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W I YAD +T       ++  +                      +          + 
Sbjct: 22  DERWLITYADMLT-------LLLAL---------------------FIVLYSISSLNTSK 53

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            E    +  D    + I+     ++ G +  +     +  NI        +     +   
Sbjct: 54  FEEMKTSLRDAFSGKIISGGEGIIETGVSATRDTPTSIVPNITPPRVQIANPRDSTAAAA 113

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            + + +D                                     +  +  +   +     
Sbjct: 114 LAARIED------------------------------------NEFRRIKAQIDAYARTH 137

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISI 268
            +   V     R G+++ ++   +  +FD   +    E + +L  +G +L       I +
Sbjct: 138 GLRDQVEAVVARRGLVVRLL--TDQVLFDSGFADLKSEGMPLLTHVGNLLVIDRIHPILV 195

Query: 269 RGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
            GHTD  P   +    NW LS  RA    + L+  GV   R    SG+A      ++   
Sbjct: 196 EGHTDDVPISTSRFESNWELSTARATEVVRYLIDRGVPTRRFGA-SGYADLHPLGSNGTD 254

Query: 327 -MNSANRRIDILVED 340
              + NRR++++++ 
Sbjct: 255 RGRARNRRVEVVLQR 269


>gi|302872092|ref|YP_003840728.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574951|gb|ADL42742.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 257

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
              K   M  ++ + D+ K++   +     +     VL      G+ I + D     +FD
Sbjct: 89  GATKNRQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296
             S+   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA S  
Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201

Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           Q  L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 202 QEILRVSKVKPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|183221220|ref|YP_001839216.1| hypothetical protein LEPBI_I1834 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911311|ref|YP_001962866.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775987|gb|ABZ94288.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779642|gb|ABZ97940.1| Putative outer membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 354

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 12/238 (5%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
            ++   T++++              ++     +    ++ E  +   K  +  +S   E 
Sbjct: 111 SIEKKGTDKERTLAEENRKREEKDRAEIDSLKRKLEEKERECLQKEQKLRESYESKMDEL 170

Query: 172 NYFLPPLSKEKI----LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +  L +E      L  ++K+ L+ L+++       L  +     +  +     ++I+
Sbjct: 171 KERIRNLEEELASLRKLTKEQKRELERLSEQTKEFEEKLAKEITSGQIRLKRFHNKLIIN 230

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           I D+     FD  SS   P  +  ++KI ++LA      I + GHTD  P +   R+NW 
Sbjct: 231 IDDK---ISFDSGSSELKPAILPAIEKIRDILASYPENYIVVEGHTDNVPIKTKFRNNWH 287

Query: 287 LSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           LS +RA S  +  L    ++    S   G+  H+  + +      + NRR+DI+V  R
Sbjct: 288 LSSERALSVLEFILQNKNLNPKNFSSA-GYGEHQPIVPNSTKENKALNRRVDIVVIPR 344


>gi|118588357|ref|ZP_01545766.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
 gi|118439063|gb|EAV45695.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
          Length = 321

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 106/326 (32%), Gaps = 29/326 (8%)

Query: 40  FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
             T+L+   +++++++          + +    +     L      + +       +S  
Sbjct: 1   MATLLL---VIIFLLSIFMIAQFFLSQQLSGR-DTVLNRLNAQISELTELLALERANSGE 56

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D  +    + +  + +        +      +      SQ      +      E    
Sbjct: 57  LEDTILGLQASLSDAEAEQTRLLGLLENSSGAADAAGGRASQLENLLDDERQISQEALAQ 116

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
           +        ++ ++       L   +      + ++  L K++++ L   V +       
Sbjct: 117 VELLNQQIAALRRQIAAANAALEASEAKEADSQAKIASLGKRLNAALVQRVQELSRYRSD 176

Query: 217 FETTRTGILISIIDQ---------RNTPMFDKSSSIPLPETIVVLQKIGEVLAH------ 261
           F      IL    D          ++  +FD       PE    L K+ + +        
Sbjct: 177 FFGRLREILSQRSDISVVGDRFVFQSEVLFDSGQEDINPEGRQELDKLADAIQELSAQIP 236

Query: 262 --STEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTDA P     R  +NW LS  RA S  + L++ GV   R+    GF  
Sbjct: 237 DEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLIERGVDPKRLVAA-GFGE 295

Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341
            +     D     + NRRI++ + +R
Sbjct: 296 FQPLEEGDTQEALAKNRRIELKLTER 321


>gi|302062274|ref|ZP_07253815.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato K40]
          Length = 341

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273


>gi|121533623|ref|ZP_01665450.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307614|gb|EAX48529.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
          Length = 262

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 11/193 (5%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                         + K            +   M    +L +L K++   ++    +N+ 
Sbjct: 69  TVPYAVDGPSQMPVLPKTPAVVSGMAGANEQAYMIETVQLVELKKQLDRYIAE---NNLA 125

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             +    T  G++I I D     +F    +   PE++ +  +I  ++A   + + + GHT
Sbjct: 126 GDIQTALTDDGLMIRIKDT---ALFASGRAELKPESLRLGTEIARMIAPLPQRVIVAGHT 182

Query: 273 DASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           D  P        NW LS  RA +    +L ++ +  +RI  +SG+  +R   ++D     
Sbjct: 183 DNMPINTPEFPSNWDLSTVRALNFMKYMLSQAEIKPERI-SVSGYGEYRPVASNDTEEGR 241

Query: 329 SANRRIDILVEDR 341
           + NRR+++L+   
Sbjct: 242 AKNRRVEVLIMRS 254


>gi|190893330|ref|YP_001979872.1| outer membrane protein (OmpA protein) [Rhizobium etli CIAT 652]
 gi|190698609|gb|ACE92694.1| probable outer membrane protein (OmpA protein) [Rhizobium etli CIAT
           652]
          Length = 343

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 107/345 (31%), Gaps = 29/345 (8%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVL------MAFFLVMWIINATDDDTKKAIEQYFN 70
           +++    D           + D   T+L      +  F+V   I + +   +  +    N
Sbjct: 7   RRRERTVDYWPG-------FVDALSTLLISIMFVLTVFVVGQFILSREITGRDEVLNRLN 59

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                L              + S  N      +    ++ +   + + +  +   +    
Sbjct: 60  SQINELTQLLALEKGSNQDLQDSVANLQASLANAEGERSRLQALLSAGSGGQDAAQKRIG 119

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                  +Q +  + +L++     + +        ++              +        
Sbjct: 120 AMTQELDEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGS 179

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248
           RL          L+   +D   +     + R  I I       ++  +F    +   PE 
Sbjct: 180 RLNVALAARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEG 239

Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQV 298
              + K+   L             V+ + GHTD  P       RDNW LS  RA S  + 
Sbjct: 240 QTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLVGTGRYRDNWELSSARATSVVKF 299

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           L+  GV  DR+    GF   +     D  ++   NRRI++ + ++
Sbjct: 300 LIGQGVPADRLVAA-GFGEFQPIAPGDAPDARATNRRIELKLTEK 343


>gi|313672698|ref|YP_004050809.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939454|gb|ADR18646.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
          Length = 276

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 1/193 (0%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +   G  +   T      +K+    +    + +I A   +   + + + +   +   +++
Sbjct: 69  EKAGGSIMEGGTGKPFEADKKGQAQIVEKIEVEIAATATENNGEKVKESLMGVVKTQLSE 128

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                ++  TT  GI I +ID+   P+F   S+        VL+ +   L   +  I I 
Sbjct: 129 -FSDQIMVSTTPEGIRIDVIDKTGNPIFSSGSASLNTNGKAVLKVLANTLNELSNKIVIE 187

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GHTDA  +R     NW LS+ RA +A   L+ +G   ++IS ++G+A  R  +  +P + 
Sbjct: 188 GHTDAMTYRGDKNGNWDLSIQRANNARAELLLNGYDANKISSVAGYAATRPIVKDNPNDP 247

Query: 330 ANRRIDILVEDRQ 342
            NRRI  L+   +
Sbjct: 248 MNRRISFLILYDK 260



 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 40/80 (50%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           +   ++ G+WKI YADF+T +MAFFLVMW++N T ++ +  I  YF  F          +
Sbjct: 17  EGGGHHGGAWKIAYADFVTAMMAFFLVMWLLNMTSEEKRAKIAMYFRTFSIFEKAGGSIM 76

Query: 84  FDEQNPPERSSQNKIDLSID 103
                 P  + +      ++
Sbjct: 77  EGGTGKPFEADKKGQAQIVE 96


>gi|149919675|ref|ZP_01908153.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
 gi|149819446|gb|EDM78876.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
          Length = 262

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 7/223 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
              Q +  +      +  Q +   +       E+  +L    +  +   K+         
Sbjct: 30  DASQAELKKTQKELEAERQANVELEAENQTLQERIAELEAEIEQLERQIKDLAEKAGLTE 89

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           KE       K + +   +      + L        +        +++ +       +FD 
Sbjct: 90  KELAELRAEKAKREAELQVYRDLFASLKKMVDAGTIKVGFREGRLVVKL---DEGILFDS 146

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
             +    E    L ++   L        + GHTD  P +      NW LS  RA      
Sbjct: 147 GRAKLKKEGQAALTELIAPLRDVNRDWIVAGHTDNVPIKTAKFQSNWELSSARAVEVVTF 206

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           L+ +G+  +RI    G+A       +      + NRRI+I++ 
Sbjct: 207 LIDTGMPAERIGSA-GYAEFDPVADNSSPEGRAQNRRIEIVLM 248


>gi|327188824|gb|EGE56018.1| putative outer membrane protein (OmpA protein) [Rhizobium etli
           CNPAF512]
          Length = 343

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 107/345 (31%), Gaps = 29/345 (8%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVL------MAFFLVMWIINATDDDTKKAIEQYFN 70
           +++    D           + D   T+L      +  F+V   I + +   +  +    N
Sbjct: 7   RRRERTVDYWPG-------FVDALSTLLISIMFVLTVFVVGQFILSREITGRDEVLNRLN 59

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                L              + S  N      +    ++ +   + + +  +   +    
Sbjct: 60  SQINELTQLLALEKGSNQDLQDSVANLQASLANAEGERSRLQALLSAGSGGQDAAQKRIG 119

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                  +Q +  + +L++     + +        ++              +        
Sbjct: 120 AMTQELDEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGS 179

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248
           RL          L+   +D   +     + R  I I       ++  +F    +   PE 
Sbjct: 180 RLNVALAARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEG 239

Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298
              + K+   L             V+ + GHTD  P       RDNW LS  RA S  + 
Sbjct: 240 QTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLAGTGRYRDNWELSSARATSVVKF 299

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           L+  GV  DR+    GF   +     D  ++   NRRI++ + ++
Sbjct: 300 LIGQGVPADRLVAA-GFGEFQPIAPGDAPDARATNRRIELKLTEK 343


>gi|91977304|ref|YP_569963.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91683760|gb|ABE40062.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 286

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 114/324 (35%), Gaps = 60/324 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +  +    W + +AD M +L++FF VM +  +T D  K  I              
Sbjct: 13  KRKSTEEAHLGHGWFVTFADLMALLVSFF-VMLVSFSTQDLQKLQIV------------- 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                         + +  +    +  ++ +  ++      + + +   N          
Sbjct: 59  --------------AGSMREAFGVQQDSRFAGVVETDGVPVQGKIRSKTNV--------- 95

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                               + D   +    E       S  K  A +         ++ 
Sbjct: 96  --------------------APDQASNTPHLEEAGGAGSSASKAKAEREFALASASLRQA 135

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +  L    + K V+FE T  G+ + + DQ   PMF + S++P   T +++ ++   L
Sbjct: 136 LQDVPELA--EMSKNVVFEETPLGLNLELTDQEGRPMFPEGSAVPYERTRMLIARLAAPL 193

Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +   +SI GHT A+P       + + LS  RA +  QVL + G++  RI  ++G    
Sbjct: 194 RATALRVSIVGHTAAAPVNADDEYDAFDLSTSRANAVRQVLKREGLAASRIMLVAGKGDG 253

Query: 319 RLKIASDPMNSANRRIDILVEDRQ 342
                  P  +ANRR+ I +    
Sbjct: 254 EPLFPEAPTLAANRRVTISLLREN 277


>gi|148266090|ref|YP_001232796.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146399590|gb|ABQ28223.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P  + +    +     +D     ++  + L+ ++    V  E TR G+++S+ +      
Sbjct: 87  PPKQAQYGKTRSHAEEKDFKAIKAAIEAYLLKNDAQNKVSVEITRRGLVVSLKE---VGF 143

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           FD  S+     +  +L  + E +++ T  I + GHTD  P  +     NW LS  RA + 
Sbjct: 144 FDSGSATVQQNSYGLLAHVAESVSNYTNPIRVEGHTDNVPISSHTFPSNWELSTARATNL 203

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            Q L++      D+IS  +GF  HR    +        NRR+DI++   +
Sbjct: 204 VQYLIRYYEFQPDKISA-TGFGEHRPIADNSTAEGRGKNRRVDIVLLSTE 252


>gi|213967914|ref|ZP_03396060.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
 gi|213927257|gb|EEB60806.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
          Length = 341

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EGILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273


>gi|86131069|ref|ZP_01049668.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818480|gb|EAQ39640.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 470

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 82/271 (30%), Gaps = 25/271 (9%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +      G+ +    P+       D            +               ++   
Sbjct: 221 KDDACPEVAGLPEFDGCPDSDGDGIQDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACP 280

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++       C ++     +   D C +    ++ N       P   K+    + +    
Sbjct: 281 TVAGIAALGGCPDADGDGIKDADDNCPNEAGPRANNGC-----PYQDKDGDGVLDKDDEC 335

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D        ++G VA+N    V  E     +L  +  +    +FD + +    E+   L
Sbjct: 336 PD--------VAGTVANNGCPEVSVE-----VLNDLNVETKKVLFDYNKASIRTESYATL 382

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            K+  V+         I GHTD          N  LS  RA S    L   G+   R+  
Sbjct: 383 DKVASVMMEYPTTRFLIEGHTDDR---GRDAYNLDLSDQRAASVRSYLTGKGIPASRLES 439

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             GF   R   ++        NRR+++ + +
Sbjct: 440 -KGFGEARPVASNKTAAGRQENRRVELSILE 469


>gi|330965971|gb|EGH66231.1| flagellar motor protein MotB [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 341

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273


>gi|312793260|ref|YP_004026183.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180400|gb|ADQ40570.1| OmpA/MotB domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 257

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
              K   M  ++ + D+ K++   +     +     VL      G+ I + D     +FD
Sbjct: 89  GATKNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296
             S+   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA S  
Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201

Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           Q  L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|222529065|ref|YP_002572947.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|312622679|ref|YP_004024292.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|222455912|gb|ACM60174.1| OmpA/MotB domain protein [Caldicellulosiruptor bescii DSM 6725]
 gi|312203146|gb|ADQ46473.1| OmpA/MotB domain protein [Caldicellulosiruptor kronotskyensis 2002]
          Length = 257

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
              K   M  ++ + D+ K++   +     +     VL      G+ I + D     +FD
Sbjct: 89  GATKNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296
             S+   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA S  
Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201

Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           Q  L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|28872066|ref|NP_794685.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301384434|ref|ZP_07232852.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato
           Max13]
 gi|302132278|ref|ZP_07258268.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28855319|gb|AAO58380.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331014600|gb|EGH94656.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 341

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     + 
Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273


>gi|92119002|ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter hamburgensis X14]
 gi|91801896|gb|ABE64271.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 343

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 113/346 (32%), Gaps = 31/346 (8%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L++ FLV+    + +   K    +  N     
Sbjct: 6   RGRRNESGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVSGKDKALEQLNTKIAQ 65

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                  + D  +  +    +  D          S + +               N     
Sbjct: 66  -------LTDLLSLEKLGKLSLGDEVSQLRAGLASAEAERDRVKGLYDGLAGAGNNAAGR 118

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           N+Q ++   +     S     +   T    ++ ++       L   +    + + R+ DL
Sbjct: 119 NTQLNKALDSEKQVSSRALAQVEVLTQQISALRRQLAALEDALDASEKKDKESQNRIADL 178

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246
            ++++  L+  V +       F      IL +  D R         +   FD + +  LP
Sbjct: 179 GQRLNVALAKRVQELSRYRSEFFGRLRTILGNRPDIRVVGDRFVFQSEVFFDTAQATLLP 238

Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
           E    L K+   L             V+ + GHTD  P  +   + NW LS  RA S  Q
Sbjct: 239 EGKAELDKVAGALIDLDKQIPHEIAWVLRVDGHTDVRPISSPVFKSNWELSSARAISVVQ 298

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            L+  GV   R+    GF   +        ++   NRRI++ + +R
Sbjct: 299 YLVSLGVPPQRLVAA-GFGEFQPLDPGTTEDAYKRNRRIELKLTER 343


>gi|332161302|ref|YP_004297879.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665532|gb|ADZ42176.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 409

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  + ++  +   T          KS+D    I    +     + +     + 
Sbjct: 45  MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+ +      NW LS DRA ++ + L
Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 53/110 (48%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+ A     ++ GSWKI YADFMT +MAFFLVMW+++ +       I +
Sbjct: 2   KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           YF    K  +++ +   D  +P      +      +     +S + +   
Sbjct: 62  YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111


>gi|318605218|emb|CBY26716.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 409

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  + ++  +   T          KS+D    I    +     + +     + 
Sbjct: 45  MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+ +      NW LS DRA ++ + L
Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 53/110 (48%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+ A     ++ GSWKI YADFMT +MAFFLVMW+++ +       I +
Sbjct: 2   KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           YF    K  +++ +   D  +P      +      +     +S + +   
Sbjct: 62  YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111


>gi|197120112|ref|YP_002140539.1| chemotaxis protein MotB [Geobacter bemidjiensis Bem]
 gi|197089472|gb|ACH40743.1| chemotaxis MotB protein [Geobacter bemidjiensis Bem]
          Length = 254

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 8/166 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +     K +   +D     ++  + L+       V    T  G+++S+ +      FD  
Sbjct: 87  QAPQRGKSRGGEKDFRATKAAIEAYLLKVGAQAKVSVSVTPRGLVVSLKEA---GFFDSG 143

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL 299
           S+    ++  +L+ +   L+  +  I + GHTD  P  +     NW LS  RA +  Q L
Sbjct: 144 SATLKQDSYALLKDVVSSLSSYSNGIRVEGHTDNMPISSASFPSNWELSTARATNVLQYL 203

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
            K       RIS   G+  +R    +        NRR+DI++   Q
Sbjct: 204 TKQTDFDPYRISAA-GYGEYRPVADNSDAEGRGKNRRVDIVLLSEQ 248


>gi|312116065|ref|YP_004013661.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311221194|gb|ADP72562.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 339

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 108/345 (31%), Gaps = 33/345 (9%)

Query: 20  KVAIDDTPNNLGSWKIVYADF---MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           K       +    +    +     +T LM  F+V     A D   K              
Sbjct: 5   KRRRPHAVDYWPGFVDALSTLLLVVTFLMVLFMVAQYFAAQDASGKDTAL-----AKLQR 59

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             A           ++ +  +    + E +  +S + K  ++       +  +       
Sbjct: 60  QIAQMADLLSLERSQKKTAMEETSGLRETLAASSAENKRLTSLLSVDSAKSGDARVAAVT 119

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +Q  E    +    ++             ++ K+       L        + + ++ DL 
Sbjct: 120 TQLDEQKSITAQALAQVELLN----QQILALRKQLAALENSLGDSDKRDKQAQAQISDLG 175

Query: 197 KKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++++  L+  V +       F               ++      ++   FD  S+   P 
Sbjct: 176 QRLNVALAKRVQELSQYRSTFFGELKKSLGDRDDIQVVGDRFVFQSEIFFDSGSADLSPL 235

Query: 248 TIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
               L K+G  L             V+ I GHTD  P    A   NW LS  RA S  + 
Sbjct: 236 GYAELDKLGTALRDLENKIPRDINWVLRIDGHTDVRPIATAAFRSNWELSSQRAISVVKY 295

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           L+  GV  +R+    GF  ++   +         NRRI++ + ++
Sbjct: 296 LVSKGVPPNRLVAA-GFGEYQPLTSGYTDADLRRNRRIELKLTEK 339


>gi|253996642|ref|YP_003048706.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
 gi|253983321|gb|ACT48179.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
          Length = 271

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 7/201 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               S    S   +   +     K I +  +  + PL    + + K ++    +AK    
Sbjct: 56  GTAFSGNGSSGVNQTSTEKGLGAKGITEANSSIVKPLPLSHLYSEKLRRERDSMAKTGVE 115

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L        +    T  GI I I D     +F   S+   P    ++ +I  ++  
Sbjct: 116 VSNKLAPMINEGKIQVIQTSRGIRIDIQDNL---LFGAGSADLSPTANAIISEIVPLIKD 172

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +   I + GHTD +P  N     NW LS  RA S  ++L   G+SE R+S  +G    + 
Sbjct: 173 NQRKIQVEGHTDNTPIHNATFFSNWELSAVRASSVVRLLSALGISEQRLSA-TGLGASQP 231

Query: 321 KIASDPM--NSANRRIDILVE 339
              ++     + NRR+ I++ 
Sbjct: 232 ISENESEAGRAKNRRVSIIIT 252



 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 39/92 (42%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +  +++   N   W + YADF+T+L AFF+VM+ I++ +    K +            ++
Sbjct: 6   RKRVEEDQENHERWLVSYADFITLLFAFFVVMYSISSVEIGKYKQLTNSIGTAFSGNGSS 65

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
                  +         + + SI + +  + +
Sbjct: 66  GVNQTSTEKGLGAKGITEANSSIVKPLPLSHL 97


>gi|322421651|ref|YP_004200874.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320128038|gb|ADW15598.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 254

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 8/213 (3%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            ++ +++E   +S+            +                    +     + +   Q
Sbjct: 40  QTDKKKAEEVLSSMRESFGYSTTSAGAKPTVIDSGAMSIVPSIHKMTQAPKRGRSRGSEQ 99

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           D     +S  + L+       V    T+ G+++S+ +      FD  S+     +  +L 
Sbjct: 100 DFRATKASIEAYLMKMGAQSKVSISVTQRGLVVSLKEA---GFFDSGSATLKQSSFSLLN 156

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
            +   LA  +  + + GHTD  P  +     NW LS  RA +  Q L K       RIS 
Sbjct: 157 DVVTSLASYSNSVRVEGHTDNIPISSASFPSNWELSTARATNVLQYLTKQEDFDPARISA 216

Query: 312 ISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             G+  +R    +  +     NRR+DI++   Q
Sbjct: 217 A-GYGEYRPVADNGDEEGRGKNRRVDIVLLSEQ 248


>gi|27376621|ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium japonicum USDA 110]
 gi|27349762|dbj|BAC46775.1| flagellar motor protein [Bradyrhizobium japonicum USDA 110]
          Length = 342

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 27/253 (10%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE------KSIN 168
             + +++ + + L + +    N  Q +  +     DSEK         +E       ++ 
Sbjct: 91  ASAESERDRIKGLYDGLAAAGNDAQGKSTELGKALDSEKAVSARALAQIEVLNQQISALR 150

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           ++       L   +    + + R+ DL  +++  L+  V +       F      IL + 
Sbjct: 151 RQLAALEEALDASEKRDKESQNRIADLGSRLNVALAQRVQELSRYRSEFFGRLRAILGNR 210

Query: 229 IDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGH 271
            D R         +   FD   +  LPE    L  +   L        A    V+ + GH
Sbjct: 211 PDIRVVGDRFVFQSEVFFDTGQATLLPEGRAELDTVANALIELDKKIPAEIAWVLRVDGH 270

Query: 272 TDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS- 329
           TD  P      + NW LS  RA S  Q L+  GV   R+    GF   +    ++  ++ 
Sbjct: 271 TDVRPVSGASFKSNWDLSAARAISVVQYLISLGVPAQRLVAA-GFGEFQPLDTANTEDAY 329

Query: 330 -ANRRIDILVEDR 341
             NRRI++ + +R
Sbjct: 330 KRNRRIELKLTER 342


>gi|209550830|ref|YP_002282747.1| hypothetical protein Rleg2_3254 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536586|gb|ACI56521.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 343

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 100/315 (31%), Gaps = 15/315 (4%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +  L+  F+V   I + +   +  +    N     L              + S  N    
Sbjct: 30  IMFLLTVFVVGQFILSREITGRDEVLSRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                  ++ +   + + +  +   +           +Q++  + +L++     + +   
Sbjct: 90  LASAEGDRSRLQALLNAGSGGQDAAQKRIGTMTQELDEQNQVSERALSQVELLNQQIAAL 149

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                ++              +        RL          L+   +D   +     + 
Sbjct: 150 RSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209

Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270
           R  I I       ++  +F    +   PE    + K+   L             V+ + G
Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMGKLAAALLDLAKEIPPEINWVLRVDG 269

Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           HTD  P       RDNW LS  RA S  + L+  GV  DR+    GF   +     +  +
Sbjct: 270 HTDNVPLAGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGETPD 328

Query: 329 SA--NRRIDILVEDR 341
           +   NRRI++ + ++
Sbjct: 329 ARATNRRIELKLTEK 343


>gi|312127873|ref|YP_003992747.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777892|gb|ADQ07378.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 257

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K   M  ++ + D+ K++   +     +     VL      G+ I + D     +FD  S
Sbjct: 92  KNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFDTGS 144

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298
           +   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA S  Q  
Sbjct: 145 AKLTPQAKGVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVLQEI 204

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 205 LRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|237756519|ref|ZP_04585048.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691319|gb|EEP60398.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 264

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 10/191 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D +K     ++     S     +   P + +   +  KR+   + + +++   +  L   
Sbjct: 41  DKKKLASFVEAISAAFSFKPISSSAPPSIIEGVGVKQKREDAKKKIKERVEQIIKKL--- 97

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N+   V  E    G+ I I+D     +F   S+    E   +L  I EV+  +   + + 
Sbjct: 98  NLEGKVSVEVIPMGVRIRILD---YILFPPCSTEINQEYKELLNGIAEVIKEAKLPVEVE 154

Query: 270 GHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P         NW LS  RA +  + L+ +G     +    G+A  +    ++  
Sbjct: 155 GHTDDIPPGPTCIYPSNWELSASRAAAVVRYLITAGNLPPYLFSAVGYADTKPISPNNSE 214

Query: 328 NSA--NRRIDI 336
                NRRI+I
Sbjct: 215 LGRKLNRRIEI 225


>gi|238756396|ref|ZP_04617706.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473]
 gi|238705369|gb|EEP97776.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473]
          Length = 354

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +         +     K + RL  L +K+   +        +   +L      G+
Sbjct: 54  GDDPTQQQGEVRKQSQSAETKKEQARLNKLREKLEELIESDPRLKALRPHLLINMMDEGL 113

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      IS+ GHTD  P+ N     
Sbjct: 114 RIQIIDSQNRPMFQMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGY 173

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G++E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 174 SNWELSADRANASRRELLSGGLAEGKVLRVVGMASTMRLKEQGADDPVNRRISILVLNKQ 233



 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 36/95 (37%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I +YF    K  +T+        +P      +    
Sbjct: 1   MTAMMAFFLVMWLLSISSPQELTQIAEYFRTPLKVALTSGDKSSSSSSPIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             +      S + K       K  ++LE  I    
Sbjct: 61  QGEVRKQSQSAETKKEQARLNKLREKLEELIESDP 95


>gi|123442804|ref|YP_001006781.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089765|emb|CAL12618.1| chemotaxis MotB protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 414

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  + ++  +   T          KS+D    I    +     + +     + 
Sbjct: 45  MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+ +      NW LS DRA ++ + L
Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 53/110 (48%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+ A     ++ GSWKI YADFMT +MAFFLVMW+++ +       I +
Sbjct: 2   KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           YF    K  +++ +   D  +P      +      +     +S + +   
Sbjct: 62  YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111


>gi|262362261|gb|ACY58982.1| chemotaxis MotB protein [Yersinia pestis D106004]
          Length = 276

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV +++
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKR 267



 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|292492806|ref|YP_003528245.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291581401|gb|ADE15858.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 286

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 96/280 (34%), Gaps = 12/280 (4%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           +  + +   G  +++ S G+      P     +           +   ++      +  +
Sbjct: 4   SFSKSWLNKGVFVLSLSLGLLIAACAPPTKPVDLERAEAAVEQVQTDPNVTQYVPVRLDE 63

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            +             +S      L   +++   + +    EK+   E         +  +
Sbjct: 64  AKEALQRAQVAWEKDESTEEVEHLAYLAQRRAAIAEVAAAEKAAQAEIKNLGQERQQMLM 123

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              + + R      K++   +  +   + +    +T R  +L          +F+   + 
Sbjct: 124 EVRELEARQAREQAKMAEARTRELEQRLAELDAEKTKRGYVL-----TLGDILFEVDRAE 178

Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P  +  L ++   L    +  + I GHTD++     A  N  LS  RA S Y+ LM +
Sbjct: 179 LTPGGMQNLFRLVTFLKEYPDREVVIEGHTDST---GSAVYNQELSQRRADSVYKFLMNN 235

Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           G+S +RI    G+        +D       NRR++I++  
Sbjct: 236 GISPERIVA-RGYGEAYPVAPNDTAAGRQRNRRVEIVILG 274


>gi|209886430|ref|YP_002290287.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
 gi|209874626|gb|ACI94422.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
          Length = 337

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 115/344 (33%), Gaps = 31/344 (9%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +        N        + D   T+++A   ++++++         + Q  +   K L 
Sbjct: 4   RTRRGGTGLNYWPG----FVDALSTLVLA---IVFLLSVFLVVQF-YLSQEVSGKDKALE 55

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  I    N       +   L+      + S+       ++ K       +       
Sbjct: 56  RLNAQIAQLTNLLSLEKVSSGTLNDQIAQLQASLATTEAERDRAKGMAESLTSGAAG-GG 114

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             ++               +        ++ ++       L+  +    + ++++ DL +
Sbjct: 115 DLNKQLATEKQISERALAQVEVLNQQISALRRQLAALEEALNASEQKGKESQEKIADLGQ 174

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPET 248
           +++  L+  V +       F      IL    D R         +   FD  SS  LPE 
Sbjct: 175 RLNVALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDSGSSGLLPEG 234

Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299
              L ++   +        A    V+ + GHTD  P  +     NW LS  RA S  Q L
Sbjct: 235 RGELDQLATAITELEKKIPAEIPWVLRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYL 294

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           +  GVS  R+    GF   +    +   ++   NRRI++ + +R
Sbjct: 295 ISRGVSPQRLVAA-GFGEFQPLDTATTDDAYKRNRRIELKLTER 337


>gi|330873802|gb|EGH07951.1| flagellar motor protein MotB [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 341

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 111/335 (33%), Gaps = 65/335 (19%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S                          T   +    G       +    +
Sbjct: 36  MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                           +L  + +                  +   +   + E       +
Sbjct: 72  PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118

Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +RL+ L +++                +LFE T+ G+ I I+D  N PMFD  S+   P  
Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L  + + +      ISI GHTDA+PF       NW LS +RA +A + L+     E+
Sbjct: 179 EDILLALADTIKSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPEE 238

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +++++ G A   L    +P    NRRIDI+V  ++
Sbjct: 239 QVARVVGHASSVLYDRDNPTGPINRRIDIVVLTKK 273


>gi|54294667|ref|YP_127082.1| flagellar motor protein MotD [Legionella pneumophila str. Lens]
 gi|53754499|emb|CAH15983.1| hypothetical protein lpl1744 [Legionella pneumophila str. Lens]
          Length = 273

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++  KS   +++      S + +     +K+++   K     L+  +++           
Sbjct: 56  SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKIKGTFKDGLDELNKSLSELEDGDFKLNRQ 115

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I   D +   +FD  S+   PE ++ L K+ E + +    + + G+TD  P    
Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172

Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS  RA +  ++L   G++  RI  ++G+        +        NRR++IL
Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231

Query: 338 VEDRQ 342
           +   +
Sbjct: 232 ITKNR 236



 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K   +   N+   W + YADF+T+L AFF+VM+ I++ +    K++ +          
Sbjct: 10  KQKKTEEHQDNH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 67

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   +        +       D     N    ++   + K   Q     I   + S
Sbjct: 68  QNKATQSTDNLKDGPEEKKIKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 127

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160
                  +       K   L + 
Sbjct: 128 LFDSGSADIKPEALIKLMKLAEK 150


>gi|134300281|ref|YP_001113777.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134052981|gb|ABO50952.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
          Length = 261

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K      S         + +E                +  +    +++++ + K+I 
Sbjct: 41  DANKYHAIASSLAKTMGGSQSIMESGGPSMVPGASESKELDTAMEQIEQQKMEKIKKQIQ 100

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     + +   V       G+++S  D     +F    +  +P +  ++ K+G +L+
Sbjct: 101 EYVDK---NGLSGKVTVAIEERGVVVSFQD---VVLFPLGVADLVPHSQGIVDKVGAILS 154

Query: 261 HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
            +   I + GHTD  P   N    NW LSL R+ S    L+  S +  DR+S  +G+  +
Sbjct: 155 QTPNYIRVEGHTDNLPIQTNKFPSNWELSLARSASVVHRLINFSHIPPDRLSA-TGYGEY 213

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
           R + A+D       NRR+DI+V   +
Sbjct: 214 RPRRANDSDANRQQNRRVDIIVLRTK 239



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF--GKNL 76
           +K   +    N   W I Y+D +T+L+ FF+VM+ ++  D +   AI         G   
Sbjct: 2   RKRGQEPEKENNERWLITYSDLITLLLIFFVVMYTLSKVDANKYHAIASSLAKTMGGSQS 61

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +  S G        E    +     I++   + 
Sbjct: 62  IMESGGPSMVPGASESKELDTAMEQIEQQKMEK 94


>gi|134094541|ref|YP_001099616.1| flagellar motor protein MotD [Herminiimonas arsenicoxydans]
 gi|133738444|emb|CAL61489.1| putative flagellar motor protein MotD [Herminiimonas
           arsenicoxydans]
          Length = 261

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 106/323 (32%), Gaps = 81/323 (25%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   ++   N   W + YADF+T+L AFF+VM+ I++ ++   + +          +   
Sbjct: 3   RRKHEEEHENHERWLVSYADFITLLFAFFVVMYAISSVNEGKYRILSNSLGIAFSGITPK 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           +  + D    P  SS + + L +  H      +       + +      + +  ++   +
Sbjct: 63  APALKD----PAPSSPSILPLPMPAHSPSQRANDAATKREKARMTNIARDILKAMAPLIR 118

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               + + T      +                N  +     E  L+ + +K L+ +A+ +
Sbjct: 119 EGKVRVTQTNRGVSVEI---------------NASVLFAPGEARLSAQSEKALRAVAEVL 163

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   + +  +     V                 N  MF                      
Sbjct: 164 NKVDNDIQVEGHTDNVPI---------------NNAMFP--------------------- 187

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                                   NW LS  RA S  ++ ++SG++E R+  + G   ++
Sbjct: 188 -----------------------SNWELSAVRASSVVRLFLESGMNEKRLVAM-GHGANQ 223

Query: 320 LKIASDPMNS--ANRRIDILVED 340
              +++       NRR+ +++  
Sbjct: 224 PVDSNETTEGRLRNRRVQLMILS 246


>gi|326795804|ref|YP_004313624.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326546568|gb|ADZ91788.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 300

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 3/209 (1%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQD 194
           N               + G    KS + +  +   E      +++E+        K ++ 
Sbjct: 61  NDPLGPSTAGYSANPIDLGGSPAKSNEKKLDLGLPEPGSTEQVTQERKQGEGNDGKEIER 120

Query: 195 LAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           +   +   L    + ++    +  E T  G+ I+++D    PMF++ S+  +P++  VL 
Sbjct: 121 MNALLEQELKRQGLMNSEETNMRIEITPQGVRITLLDDPTKPMFERGSARLMPDSENVLL 180

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            IG +LA     ISI GHTD+SP+ +    DNW LS  RA SA +++ + GVS+ R++++
Sbjct: 181 GIGSILARLKNPISISGHTDSSPYVDEREIDNWDLSSARANSARKIIEEGGVSDKRMAQV 240

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDR 341
            G A        DP ++ NRRI I +   
Sbjct: 241 IGLADSIPYNRFDPTSAENRRISITLLTD 269



 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           + ++I++        ++ G+WKI  ADF   +MAFFLV+WIIN        AIE YFN  
Sbjct: 4   EELVIRRVKRRKKAGHHGGAWKIALADFALAMMAFFLVLWIINVASPQELAAIEGYFNDP 63

Query: 73  GKNLMTA-SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
                   S    D    P +S++ K+DL + E  +   V  +          +
Sbjct: 64  LGPSTAGYSANPIDLGGSPAKSNEKKLDLGLPEPGSTEQVTQERKQGEGNDGKE 117


>gi|91215422|ref|ZP_01252393.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
           ATCC 700755]
 gi|91186374|gb|EAS72746.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
           ATCC 700755]
          Length = 457

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 16/291 (5%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           K + +  F     +    S G+       +       D +          +      +  
Sbjct: 171 KSSFKTAFEDDNFDYFQHSAGLTIAFGGTDSDGDGVYDKNDMCPDVPGLAEFNGCPDSDG 230

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                 ++     +  ++ + C +S +       D C +    +++N   +     ++ +
Sbjct: 231 DGITDKDDKCPDTAGLEEFDGCADSDSDGIADPNDDCPNEAGTEALNGCPDADNDGIANK 290

Query: 182 KIL--AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------FETTRTGILISIIDQR 232
                     K         +     L  D++   V               I   + +  
Sbjct: 291 NDDCPNEAGPKANNGCPYPDADGDGVLDKDDMCPDVAGTEANNGCPEVTEEIQKELNEYA 350

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+   +     +   L  I  +L        ++ GHTD+      A++N  LS  R
Sbjct: 351 KTINFETGKTTISKNSEEALTAIIAILDEYPNAKFTVEGHTDSV---GSAKNNESLSEAR 407

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A S    L+K+GV E R+S   GF   +   ++D     + NRR++I ++ 
Sbjct: 408 ALSVKSYLVKNGVDEFRLSSA-GFGEQKPVESNDTKAGRAENRRVEINLKK 457


>gi|269138690|ref|YP_003295391.1| flagellar motor protein [Edwardsiella tarda EIB202]
 gi|267984351|gb|ACY84180.1| flagellar motor protein [Edwardsiella tarda EIB202]
 gi|304558696|gb|ADM41360.1| Flagellar motor rotation protein MotB [Edwardsiella tarda FL6-60]
          Length = 332

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202
           K +L+                  + ++E                 + RL+ L +++    
Sbjct: 68  KVALSEGQRSSDSFSPIPGGGDDVTQKEGEVRKFAEDPDPQTRAEQMRLKRLRERLEQVI 127

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++      +   ++      G+ I IID +N PMF   S+   P    +L+ I  +L   
Sbjct: 128 INDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNEL 187

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD  P+ N      NW LS DRA ++ + L+  G++ ++I ++ G A    
Sbjct: 188 PNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELIAGGLAGNKILRVVGMADTMN 247

Query: 321 KIASDPMNSANRRIDILVEDR 341
                   + NRRI ILV ++
Sbjct: 248 LRNLAGNAAVNRRISILVLNK 268



 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 65/168 (38%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
                I++KKK       ++ G+WKI YADFMT +MAFFLVMW++          I +YF
Sbjct: 4   GKHPVILVKKKRGGHGQASHGGAWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  ++  +   D  +P      +      +        D +  +   + +  R   
Sbjct: 64  RTPLKVALSEGQRSSDSFSPIPGGGDDVTQKEGEVRKFAEDPDPQTRAEQMRLKRLRERL 123

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
               +++ +      + +    ++G  +       + + +  +  + P
Sbjct: 124 EQVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVEP 171


>gi|167576627|ref|ZP_02369501.1| Chemotaxis lafU protein [Burkholderia thailandensis TXDOH]
          Length = 311

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 2/217 (0%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N        Q +         D   G    +S     +    +               +
Sbjct: 50  MNVTPEKERKQVAAEIAGHPFFDGGVGIFEQRSRKPVVAPFDAQQPERVKRRTPGAARER 109

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               LQ      +  +       +   V       G+ I+I D     MF++ S    P+
Sbjct: 110 TIDSLQQRRALAARIMDEATRLGMNGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            + +L  +  VL   T  + I GHTDA+ +   ++  +NW LS  RA  A Q+L   G+ 
Sbjct: 170 FVRLLTALVPVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMD 229

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             R+ +ISG       +  +P +  NRR+++L+   +
Sbjct: 230 AQRMFQISGMGDSVPAVPDNPDHDMNRRVELLLLTSR 266



 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 67/177 (37%), Gaps = 8/177 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+++ +         II++        ++ G+WK+ +ADF   LMA F+V+W++N T + 
Sbjct: 1   MSTNKEAGHG---PTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEK 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +K +       G        GIF++++     +    D    E + + +       T  
Sbjct: 57  ERKQVAAEI--AGHPFFDGGVGIFEQRSRKPVVA--PFDAQQPERVKRRTPGAARERTID 112

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             Q +R          ++   +   +   + +  +     +D +    +  +   P 
Sbjct: 113 SLQQRRALAARIMDEATRLGMNGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169


>gi|154244796|ref|YP_001415754.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
           Py2]
 gi|154158881|gb|ABS66097.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
          Length = 340

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 103/324 (31%), Gaps = 20/324 (6%)

Query: 37  YADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           + D ++ L+  F+ +  +               +         +   ++ +  E+   + 
Sbjct: 18  FVDALSTLLLVFIFLLSVFMLTQFFLTQEMSGKDNVMQRLQAQIRQLTELLSLERATGQT 77

Query: 93  SSQNKIDLSIDEHITKNSVD--LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           +      L      T+   D      S                     Q +    ++ + 
Sbjct: 78  TDGELATLRASLEATETERDRLKSQLSAAPAPTSDEGRTRALAREVDLQKDVAARAVAQI 137

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               + +        ++ +  N      ++ +       +RL     +    L+   ++ 
Sbjct: 138 ELLNQQISALRRQMAALEEALNVAEKRDAESQTKITDLGRRLNVALAQRVQELTRFRSEF 197

Query: 211 IVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------A 260
             +       R  + +       ++   FD+ S+ P PE +  L K+   +         
Sbjct: 198 FGRLRDILGNRPDVRVVGDRFVFQSEVFFDRGSATPRPEALAELDKLAGAILDLEKSIPP 257

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             +  + I GHTD  P        NW LS  RA +  Q L+  GVS   +    GF  ++
Sbjct: 258 DISWALRIDGHTDNRPIATPQFPSNWELSAARAIAVVQYLISKGVSPQHLIAA-GFGEYQ 316

Query: 320 LKIA--SDPMNSANRRIDILVEDR 341
                 SD   + NRRI++ + +R
Sbjct: 317 PIDPAASDEARARNRRIELKLTER 340


>gi|262199850|ref|YP_003271059.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262083197|gb|ACY19166.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 74/216 (34%), Gaps = 12/216 (5%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           ++        ++   +  T  SE+ +   ++      +  +       L + +    K +
Sbjct: 46  DLAEQERDANAQEVASLQTELSERAEMSDETRRRMAKLTDDMQATEQELLELRAQQQKAE 105

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +RL+   +      + +    +            +        +  +F    +    +  
Sbjct: 106 ERLKAFRQLYDRFQALVDTGKLQVDFRNGQMVLKL-------PSEVLFPSGRAKLSDKGQ 158

Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
             L ++  +L    +    + GHTDA   R     DNW LS  RA S    ++++G   +
Sbjct: 159 EALSEVLNILMEFKDRRFLVAGHTDAVKIRGGRFKDNWDLSTARAVSVVDYMVEAGFDPN 218

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            +    G+        +D     + NRRI+I++   
Sbjct: 219 NLGAA-GYGEFDPVAPNDTAENRALNRRIEIILVPD 253


>gi|51596729|ref|YP_070920.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 32953]
 gi|186895791|ref|YP_001872903.1| flagellar motor protein MotB [Yersinia pseudotuberculosis PB1/+]
 gi|51590011|emb|CAH21644.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 32953]
 gi|186698817|gb|ACC89446.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 439

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|146296538|ref|YP_001180309.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410114|gb|ABP67118.1| OmpA/MotB domain protein [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 257

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K   M  ++ + D+ K++ S +     +     VL      G+ I + D     +F+  S
Sbjct: 92  KNRQMTEEEIINDIQKQVLSLIKEHGIEG---KVLVIQEERGLSILLKD----VLFNSGS 144

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298
           +   P+   V+ +I ++L         I GHTD  P  N     NW LS  RA +  Q  
Sbjct: 145 AQLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATTVLQEI 204

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 205 LRVSKVKPERF-SVVGYGEYRPIASNKTPQGRALNRRVTIVILR 247


>gi|153950639|ref|YP_001400614.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 31758]
 gi|152962134|gb|ABS49595.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 31758]
          Length = 433

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|238764369|ref|ZP_04625319.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
           33638]
 gi|238697395|gb|EEP90162.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
           33638]
          Length = 375

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  + ++  +   T          KS+D    I    +     + +     + 
Sbjct: 8   MWLLSVSSPQELTQIAEYFRTPLKVALTHGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 67

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 68  EESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 127

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+ +      NW LS DRA ++ + L
Sbjct: 128 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 187

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 188 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 230



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           +MAFFLVMW+++ +       I +YF    K  +T  +   D  +P      +      +
Sbjct: 1   MMAFFLVMWLLSVSSPQELTQIAEYFRTPLKVALTHGEKSSDSTSPIPGGGDDPTQQVGE 60

Query: 104 EHITKNSVDLKIGS 117
                +S + +   
Sbjct: 61  VRKHIDSEESRKEE 74


>gi|162420339|ref|YP_001607210.1| flagellar motor protein MotB [Yersinia pestis Angola]
 gi|162353154|gb|ABX87102.1| chemotaxis MotB protein [Yersinia pestis Angola]
          Length = 421

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|115522688|ref|YP_779599.1| hypothetical protein RPE_0661 [Rhodopseudomonas palustris BisA53]
 gi|115516635|gb|ABJ04619.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 341

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 98/310 (31%), Gaps = 13/310 (4%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L++ FLV+    + +   K    Q  N     L          +   E            
Sbjct: 33  LLSVFLVVQFFLSQEVTGKDKALQELNAKLAQLNDMLSLEKLGKIGLEDQLGQLRAGLAS 92

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
               +  V                  N    +   + +    +L +     + +      
Sbjct: 93  AETERKRVQGLYDGLAGAGNDAAGRANELNKALDSERQISTRALAQIEVLNQQIAALRRQ 152

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             ++ +  +       + +       +RL     +    LS   ++   +       R+ 
Sbjct: 153 LAALEEALDVSEKRGKESQGKIADLGQRLNVALAQRVQELSRYRSEFFGRLRAILGNRSE 212

Query: 224 ILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTD 273
           I I       ++   FD   ++ LPE    L K+  VL           T V+ + GHTD
Sbjct: 213 IRIVGDRFVFQSEVFFDTGQAVLLPEGRAELDKLASVLIDLGKQIPDEITWVLRVDGHTD 272

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--AN 331
             P     + NW LS  RA S  Q L+  GV   R+    GFA  +    +    +   N
Sbjct: 273 VRPITGAFKSNWELSSARAISVVQYLVTLGVPAQRLVAA-GFAEFQPLDVAATEEAYRRN 331

Query: 332 RRIDILVEDR 341
           RRI++ + +R
Sbjct: 332 RRIELKLTER 341


>gi|261344163|ref|ZP_05971807.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
 gi|282567758|gb|EFB73293.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
          Length = 306

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 2/152 (1%)

Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           R + L + +   +      + +   +L +    G+ I I+D  N PMF   S+I  P   
Sbjct: 112 RFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFKVGSAIVEPYMR 171

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L+ I  +L      ISI GHTD  P+ +     NW LS DRA ++ + L+  G+ E +
Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNWELSSDRANASRRELIMGGMEEQK 231

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           I ++ G A        + +   NRRI I+V +
Sbjct: 232 ILRVVGMASSIHLDKENGLAPINRRISIIVLN 263



 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 46/102 (45%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N   II  KK       ++ G+WKI YADFMT +MAFFLVMW+I+ +       I +YF
Sbjct: 3   GNHPQIIRVKKRGGHQQGSHGGAWKIAYADFMTAMMAFFLVMWLISISSPQELTKIAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
                  +       D  NP     ++ I    D     N++
Sbjct: 63  RTPLSVAINPGSKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104


>gi|150388139|ref|YP_001318188.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948001|gb|ABR46529.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 237

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 7/196 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGL 206
             ++     + ++   E +   +EN  L    +     +   + ++ DL +   + +  L
Sbjct: 44  AEEASVLYHVKEALTSEVADLSDENQRLLEEKESLAALLFGLEDIELDLVQSQETFIRFL 103

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
             ++++  V       G++I   D     +F    +    E  ++L  +   L      I
Sbjct: 104 RENHLLDRVDVIEEERGLVIRFRDS---VLFGSGQARISQEGYMLLDHVTAKLRTIDNAI 160

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            I G TD  P +      NW LS+ RA    + ++     E+    +SGF   +   +++
Sbjct: 161 VIEGFTDNIPIQTNEFPSNWELSVARAIGVARYMIDEEYIEESRISVSGFGEQQPIDSNE 220

Query: 326 PMNSA--NRRIDILVE 339
                  NRRI+I + 
Sbjct: 221 TNEGRANNRRIEITIL 236


>gi|310817592|ref|YP_003949950.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390664|gb|ADO68123.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 640

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 21/274 (7%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +      G    Q  P+       D +            K      K   +  E+    
Sbjct: 381 ADQCPTVAGEAVHQGCPDTDKDGIPDAADQCPSAAGLAVFKGCPDTDKDGLRDSEDLCPL 440

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +     + C               K +D +  +++++        KE      +     
Sbjct: 441 EAGPADRQGC-------------PQKDSDGDGLLDEQDACPSVAGLKELKGCPAKDTDND 487

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            ++  + +  +     +       +     I    ID + T  FD   +     +  +L 
Sbjct: 488 TVSDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLD 547

Query: 254 KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           ++ ++L    E+  I++ GHTD          N RLS  RA +    L + GV+  R+  
Sbjct: 548 QVAKLLREHPEIESITVEGHTDNV---GKPEANLRLSQQRAEAVRDYLARKGVAPQRLEA 604

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
             G+   R    +      + NRR+D +   R+G
Sbjct: 605 -KGYGQERPIAPNTTSKGRATNRRVDFITTTREG 637


>gi|115524024|ref|YP_780935.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115517971|gb|ABJ05955.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 272

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/321 (19%), Positives = 108/321 (33%), Gaps = 63/321 (19%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD    LMA  L  +++         A         K +  + 
Sbjct: 3   KKKREEAHGGHGWFVTFAD----LMALLLAFFVM-------LVAFSTQDKDKLKVVAGSM 51

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           +  F  Q     +   + D        KN+  +     +        +N+          
Sbjct: 52  RDAFGVQPDSRYAGVLEQDGVPISGKLKNASLVSTNQASNTPSPDEGDND---------- 101

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                    S   +        S     A++    L +++K   
Sbjct: 102 -------------------------SAKTKAEREFALASASLRQALQDMPELTEISKN-- 134

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+FE T+ G+ + I DQ    MF + S +P   T +++Q++   L 
Sbjct: 135 --------------VIFEETKDGLNMEITDQDGRSMFAEGSKVPYDRTRLLVQRLAAPLR 180

Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   ISI GHT A      +  N + LS DRA +  Q+L + GV   +I  +SG A  +
Sbjct: 181 ATPLRISIAGHTSAGVVIGRSDYNAFDLSSDRANAVRQILEREGVPTSQIYAVSGRADSQ 240

Query: 320 LKIASDPMNSANRRIDILVED 340
                D   SANRR+ I +  
Sbjct: 241 PLFPDDATLSANRRVTITLMR 261


>gi|298507057|gb|ADI85780.1| chemotaxis MotB protein [Geobacter sulfurreducens KN400]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 8/224 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            Q  +  I  +  S +      +                +  SI  +         K   
Sbjct: 38  GQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNAD 97

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              + +   +D     SS  + L+       V     R G+++S+ +      FD  S+I
Sbjct: 98  SKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEA---GFFDSGSAI 154

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK- 301
                  +L K+ E L+  +  + + GHTD  P  +     NW LS  RA +    L + 
Sbjct: 155 VKESAYPLLAKVAESLSAYSNPVRVEGHTDTMPISSAQFPSNWELSTARATNIVHFLTRS 214

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
                  IS   GF  +R    ++       NRR+DI++   +G
Sbjct: 215 YDFDPGAISAA-GFGEYRPIADNNTAEGRSKNRRVDIVLLSGEG 257


>gi|22125717|ref|NP_669140.1| flagellar motor protein MotB [Yersinia pestis KIM 10]
 gi|108807851|ref|YP_651767.1| flagellar motor protein MotB [Yersinia pestis Antiqua]
 gi|108812127|ref|YP_647894.1| flagellar motor protein MotB [Yersinia pestis Nepal516]
 gi|149366375|ref|ZP_01888409.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
 gi|165925475|ref|ZP_02221307.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938485|ref|ZP_02227042.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008640|ref|ZP_02229538.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210582|ref|ZP_02236617.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401678|ref|ZP_02307169.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422628|ref|ZP_02314381.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426350|ref|ZP_02318103.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218928797|ref|YP_002346672.1| flagellar motor protein MotB [Yersinia pestis CO92]
 gi|229841656|ref|ZP_04461814.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843773|ref|ZP_04463916.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894516|ref|ZP_04509698.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
 gi|229902447|ref|ZP_04517566.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
 gi|270490373|ref|ZP_06207447.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
 gi|294504144|ref|YP_003568206.1| flagellar motor protein [Yersinia pestis Z176003]
 gi|21958635|gb|AAM85391.1|AE013785_4 lateral flagellar motor protein [Yersinia pestis KIM 10]
 gi|108775775|gb|ABG18294.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
 gi|108779764|gb|ABG13822.1| chemotaxis MotB protein [Yersinia pestis Antiqua]
 gi|115347408|emb|CAL20310.1| chemotaxis MotB protein [Yersinia pestis CO92]
 gi|149290749|gb|EDM40824.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
 gi|165913600|gb|EDR32220.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922584|gb|EDR39735.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165993022|gb|EDR45323.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207762|gb|EDR52242.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958475|gb|EDR55496.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048783|gb|EDR60191.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054705|gb|EDR64509.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680493|gb|EEO76590.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
 gi|229689381|gb|EEO81444.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694119|gb|EEO84167.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229703535|gb|EEO90552.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
 gi|262366194|gb|ACY62751.1| flagellar motor protein [Yersinia pestis D182038]
 gi|270338877|gb|EFA49654.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
 gi|294354603|gb|ADE64944.1| flagellar motor protein [Yersinia pestis Z176003]
          Length = 427

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|254973922|ref|ZP_05270394.1| chemotaxis protein [Clostridium difficile QCD-66c26]
 gi|255091309|ref|ZP_05320787.1| chemotaxis protein [Clostridium difficile CIP 107932]
 gi|255312966|ref|ZP_05354549.1| chemotaxis protein [Clostridium difficile QCD-76w55]
 gi|255515725|ref|ZP_05383401.1| chemotaxis protein [Clostridium difficile QCD-97b34]
 gi|255648819|ref|ZP_05395721.1| chemotaxis protein [Clostridium difficile QCD-37x79]
 gi|260682038|ref|YP_003213323.1| chemotaxis protein [Clostridium difficile CD196]
 gi|260685636|ref|YP_003216769.1| chemotaxis protein [Clostridium difficile R20291]
 gi|306518934|ref|ZP_07405281.1| chemotaxis protein [Clostridium difficile QCD-32g58]
 gi|260208201|emb|CBA60548.1| chemotaxis protein [Clostridium difficile CD196]
 gi|260211652|emb|CBE01912.1| chemotaxis protein [Clostridium difficile R20291]
          Length = 231

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +   L   V + N+   V  +    GIL+ + D     +FD   S    ++   L K
Sbjct: 85  KSNLEQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKADSKATLNK 141

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312
           + +++      I I GHTD  P ++     NW LS  RA S  +  + + G+   R+   
Sbjct: 142 VYDMIKMMKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-RLFSA 200

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339
           +G   ++  ++++     + NRR++IL+ 
Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          +K        N  +W   YAD +T+++ FF++++  +  D +  K I          +  
Sbjct: 3  RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIADALKGQFSGISM 62

Query: 79 ASKGIFDEQNPP 90
           S G    +  P
Sbjct: 63 FSTGSSTSEKSP 74


>gi|45441604|ref|NP_993143.1| flagellar motor protein MotB [Yersinia pestis biovar Microtus str.
           91001]
 gi|145599064|ref|YP_001163140.1| flagellar motor protein MotB [Yersinia pestis Pestoides F]
 gi|45436465|gb|AAS62020.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|145210760|gb|ABP40167.1| chemotaxis MotB protein [Yersinia pestis Pestoides F]
 gi|320014810|gb|ADV98381.1| chemotaxis MotB protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 433

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|91978797|ref|YP_571456.1| hypothetical protein RPD_4338 [Rhodopseudomonas palustris BisB5]
 gi|91685253|gb|ABE41555.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 341

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 117/346 (33%), Gaps = 32/346 (9%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +    D   N        + D   T+++A   ++++++         + Q      K L 
Sbjct: 5   RGRRQDTGFNYWPG----FVDALSTLILA---IVFLLSVFLVVQF-FLSQEVTGKDKALQ 56

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  +    +        K++L       +  +       ++ K            +  
Sbjct: 57  ELNARLAQLSDLLSLEKLGKLNLEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGNDAAG 116

Query: 138 QQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +  E  K   +      + L +         ++ ++       L   +    + + R+ D
Sbjct: 117 RAGELNKALDSEKQLSARALAQVEVLNQQISALRRQLAALEEALDASEKRDKESQGRIAD 176

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPL 245
           L ++++  L+  V +       F      IL    D R         +   FD   ++ L
Sbjct: 177 LGQRLNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLL 236

Query: 246 PETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           PE    L K+   L             V+ + GHTD  P     + NW LS  RA S  Q
Sbjct: 237 PEGRAELDKLAPALTELDKKIPPEIAWVLRVDGHTDRRPITGAFKSNWELSSARAISVVQ 296

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            L+  GV   R+    GFA  +    ++  ++   NRRI++ + +R
Sbjct: 297 YLVSLGVPAQRLVAA-GFAEFQPLDIANTDDAYKRNRRIELKLTER 341


>gi|307610480|emb|CBX00052.1| hypothetical protein LPW_18071 [Legionella pneumophila 130b]
          Length = 267

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++  KS   +++      S + +     +K+ +   K     L+  +++           
Sbjct: 50  SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 109

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I   D +   +FD  S+   PE ++ L K+ E + +    + + G+TD  P    
Sbjct: 110 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 166

Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS  RA +  ++L   G++  RI  ++G+        +        NRR++IL
Sbjct: 167 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 225

Query: 338 VEDRQ 342
           +   +
Sbjct: 226 ITKNR 230



 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K   +   ++   W + YADF+T+L AFF+VM+ I++ +    K++ +          
Sbjct: 4   KQKKTEEHQDSH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   +        +       D     N    ++   + K   Q     I   + S
Sbjct: 62  QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 121

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160
                  +       K   L + 
Sbjct: 122 LFDSGSADIKPEALIKLMKLAEK 144


>gi|212709470|ref|ZP_03317598.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
           30120]
 gi|212687808|gb|EEB47336.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
           30120]
          Length = 312

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           R + L + +   +      + +   +L +    G+ I I+D  N PMF   S+   P   
Sbjct: 112 RFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFKVGSATVEPYMR 171

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L+ I  +L      ISI GHTD  P+ +     NW LS DRA ++ + L+  G+ E +
Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNWELSSDRANASRRELIMGGMDERK 231

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + ++ G A        + +   NRRI I+V +
Sbjct: 232 VLRVVGMASSIHLDKENGLAPVNRRISIIVLN 263



 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 12  DQFIIIKKKVAIDDTPN-NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           +   II+ K       + + G+WKI YADFMT +MAFFLVMW+I+ +       I +YF 
Sbjct: 4   NGPQIIRVKKKGGHQQHAHGGAWKIAYADFMTAMMAFFLVMWLISISSPQELTKIAEYFR 63

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
                 +       D  NP     ++ I    D     N++
Sbjct: 64  TPLSTAINPGAKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104


>gi|170023989|ref|YP_001720494.1| flagellar motor protein MotB [Yersinia pseudotuberculosis YPIII]
 gi|169750523|gb|ACA68041.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
          Length = 451

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +             + +   RL  L +K+   +        +   +L      G+
Sbjct: 88  GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+   P    +L+ I  +L      +S+ GHTD  P+       
Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YADFMT +MAFFLVMW++  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|82702444|ref|YP_412010.1| flagellar motor protein MotD [Nitrosospira multiformis ATCC 25196]
 gi|82410509|gb|ABB74618.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 288

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 83/198 (41%), Gaps = 7/198 (3%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           + +  S         +   +    EE+  +    +       +++ ++ +A+ + +    
Sbjct: 58  AQSDRSVLITPESAPSSPVQESPTEEDRSIKKARRLAEAQRGQQEAMEVIARDVVAAFQP 117

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
             +      V    +  G+ + I  +    +F    ++    +  VL+ + +VL ++   
Sbjct: 118 FRSLIENGQVRVIPSSRGLAVEINAK---VLFAPGQAVLEQNSARVLEAVAQVLKNNDYP 174

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + GHTD+ P        NW LS  RA S  ++L+ SGV   R++ + G+  +R   ++
Sbjct: 175 IQVEGHTDSIPIVTDKFPSNWELSAVRASSVVRLLIGSGVEAARLTAV-GYGENRPVDSN 233

Query: 325 DPMNS--ANRRIDILVED 340
           D  +    NRR+ I++  
Sbjct: 234 DTEDGRTRNRRVTIMILS 251



 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 1/125 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K  +++  N+   W + YADF+T+L+A F+VM+ ++  ++   + +             
Sbjct: 3   RKRKLEERENH-ERWLVSYADFITLLLALFVVMYAVSQVNEGKYQRMAGSLVNAFGAQSD 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            S  I  E  P     ++  +        +   + + G     +   R     F    S 
Sbjct: 62  RSVLITPESAPSSPVQESPTEEDRSIKKARRLAEAQRGQQEAMEVIARDVVAAFQPFRSL 121

Query: 139 QSEHC 143
                
Sbjct: 122 IENGQ 126


>gi|302389670|ref|YP_003825491.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302200298|gb|ADL07868.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 248

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 6/148 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + + +T   ++ +N +KG+  E    G+ I  I+     +FD   +    +   VL KI 
Sbjct: 96  ENLENTFQEIINENNLKGIRVEREERGLAIRFIE---GALFDSGKAYLREDARQVLDKIA 152

Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L      I + GHTD  P  N     NW LS  RA +  +  ++       +   +G+
Sbjct: 153 PILKKIQRPIRVEGHTDNVPIHNSEFPSNWELSTTRAVNVVRYFIEKHNISPHMISAAGY 212

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
             +     +D     + NRR+DI++ + 
Sbjct: 213 GEYHPIAPNDSEKNRALNRRVDIIILNS 240


>gi|149191181|ref|ZP_01869439.1| chemotaxis LafU protein [Vibrio shilonii AK1]
 gi|148835019|gb|EDL51998.1| chemotaxis LafU protein [Vibrio shilonii AK1]
          Length = 322

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
               ++ L+ LA+++   LSG+   + +  V    T  G+ + I D    PMF +  +  
Sbjct: 109 EFNSQQELEVLAQRVKQELSGI---DALGSVSVFVTPQGVKLVIADSDKGPMFFRGGAKV 165

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            P    +L  +  +L      + I GHTDAS ++     NW LS +RA SA   L K G+
Sbjct: 166 TPFYQDLLLNLAGLLEKIENKMIITGHTDASRYKGSRMTNWELSSNRANSARYYLDKGGL 225

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            E  I +++G +       ++  +  NRRI++ +   +
Sbjct: 226 QERHIFQVTGMSDTAPIDFNNAKSGINRRIELYILTAE 263



 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 1/185 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           E    II KK         + G WK+  AD M  LM  FLV+WI+   D D +K +  YF
Sbjct: 2   EQPNVIINKKGRRKRGELQHGG-WKVAMADLMISLMCLFLVLWILQVVDVDDQKKLLNYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                 +M          +       +      D  + + +    +      +Q   +  
Sbjct: 61  AYGNDPIMHLGTNESGGNSINPLPLPHVATSHYDAELHRINDTSVLEGEFNSQQELEVLA 120

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  S        S+    +  K +   +D      +      P      +      
Sbjct: 121 QRVKQELSGIDALGSVSVFVTPQGVKLVIADSDKGPMFFRGGAKVTPFYQDLLLNLAGLL 180

Query: 190 KRLQD 194
           +++++
Sbjct: 181 EKIEN 185


>gi|52842007|ref|YP_095806.1| flagellar motor protein MotD [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629118|gb|AAU27859.1| flagellar motor protein MotB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 273

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++  KS   +++      S + +     +K+ +   K     L+  +++           
Sbjct: 56  SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 115

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I   D +   +FD  S+   PE ++ L K+ E + +    + + G+TD  P    
Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172

Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS  RA +  ++L   G++  RI  ++G+        +        NRR++IL
Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231

Query: 338 VEDRQ 342
           +   +
Sbjct: 232 ITKNR 236



 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K   +   ++   W + YADF+T+L AFF+VM+ I++ +    K++ +          
Sbjct: 10  KQKKTEEHQDSH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 67

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   +        +       D     N    ++   + K   Q     I   + S
Sbjct: 68  QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 127

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160
                  +       K   L + 
Sbjct: 128 LFDSGSADIKPEALIKLMKLAEK 150


>gi|167466606|ref|ZP_02331310.1| flagellar motor protein MotB [Yersinia pestis FV-1]
          Length = 427

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 3/224 (1%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   ++   L    +       +   S        S       +  +          
Sbjct: 44  GAVRLAVSSPQELPQIAEYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQIN 103

Query: 182 KILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
              + +   RL  L +K+   +        +   +L      G+ I IID +N PMF   
Sbjct: 104 SEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMG 163

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298
           S+   P    +L+ I  +L      +S+ GHTD  P+        NW LS DRA ++ + 
Sbjct: 164 SAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSNWELSADRANASRRE 223

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           L+  G+ E +I ++ G A           +  NRRI ILV ++Q
Sbjct: 224 LLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             +N   I++KK+       +  GSWKI YA  MT +MAFFL    +  +       I +
Sbjct: 2   KHQNHPVILVKKRKTKHGAAHYGGSWKIAYAKVMTAMMAFFLGAVRLAVSSPQELPQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           YF    K  +T+        +P      +      +     NS + +
Sbjct: 62  YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108


>gi|115373816|ref|ZP_01461109.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369215|gb|EAU68157.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 669

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 21/274 (7%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +      G    Q  P+       D +            K      K   +  E+    
Sbjct: 410 ADQCPTVAGEAVHQGCPDTDKDGIPDAADQCPSAAGLAVFKGCPDTDKDGLRDSEDLCPL 469

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +     + C               K +D +  +++++        KE      +     
Sbjct: 470 EAGPADRQGCPQ-------------KDSDGDGLLDEQDACPSVAGLKELKGCPAKDTDND 516

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            ++  + +  +     +       +     I    ID + T  FD   +     +  +L 
Sbjct: 517 TVSDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLD 576

Query: 254 KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           ++ ++L    E+  I++ GHTD          N RLS  RA +    L + GV+  R+  
Sbjct: 577 QVAKLLREHPEIESITVEGHTDNV---GKPEANLRLSQQRAEAVRDYLARKGVAPQRLEA 633

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
             G+   R    +      + NRR+D +   R+G
Sbjct: 634 -KGYGQERPIAPNTTSKGRATNRRVDFITTTREG 666


>gi|255527289|ref|ZP_05394169.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
 gi|255509027|gb|EET85387.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
          Length = 182

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 7/140 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
              + +   V  E    G+++S+ D      F+   +  +  +   L +IG++L      
Sbjct: 5   YKKNGMQNSVTTEVDERGLVVSLRDTL---FFETGKAEVIAASQGKLVEIGKILNQLDNT 61

Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GHTD  P  N     NW+LS  RA +  ++L+ +GV   ++S ++ +  +R  + +
Sbjct: 62  MRIEGHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPPKKLSSVA-YGEYRPVLDN 120

Query: 325 DPM--NSANRRIDILVEDRQ 342
                 + NRR+DI+V   +
Sbjct: 121 STEDGRARNRRVDIIVVSNK 140


>gi|126697829|ref|YP_001086726.1| chemotaxis protein [Clostridium difficile 630]
 gi|255099425|ref|ZP_05328402.1| chemotaxis protein [Clostridium difficile QCD-63q42]
 gi|115249266|emb|CAJ67079.1| Flagellar motor rotation protein MotB (Chemotaxis protein MotB)
           [Clostridium difficile]
          Length = 231

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +   L   V + N+   V  +    GIL+ + D     +FD   S    ++   L K
Sbjct: 85  KSNLEQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKVDSKATLNK 141

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312
           + +++      I I GHTD  P ++     NW LS  RA S  +  + + G+   R+   
Sbjct: 142 VYDMIKMMKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-RLFSA 200

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339
           +G   ++  ++++     + NRR++IL+ 
Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K        N  +W   YAD +T+++ FF++++  +  D +  K I             
Sbjct: 3   RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIADALK-------G 55

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              G          S ++ ID  + +   K++++  +         Q 
Sbjct: 56  QFSGTSIFSTGSSTSEKSPIDSVLVDKNDKSNLEQDLKDKVNNSNLQN 103


>gi|182418302|ref|ZP_02949597.1| chemotaxis protein MotB [Clostridium butyricum 5521]
 gi|237666437|ref|ZP_04526422.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377684|gb|EDT75228.1| chemotaxis protein MotB [Clostridium butyricum 5521]
 gi|237657636|gb|EEP55191.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 244

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 8/215 (3%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
           F L  S  +   +              KSTD     +  +        + KI    ++  
Sbjct: 32  FVLLYSMSTVDAQKVQAISQAFSIMSGKSTDSILQYDMYQGSQPVLGGESKIENTIQQSE 91

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             D           +  + +   +       G+++ + D     +F+   +  +  +  +
Sbjct: 92  NIDKKTMYEDVKEFVDKNQLNTTIDIAQDENGVVLQLRDN---ILFESGKADLIDGSSEI 148

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRI 309
           L KI  +++     I I GHTD  P      +DNW LS  RA +  +   +  G    R 
Sbjct: 149 LDKINTLISTLPNSIVIEGHTDNVPISTSIYKDNWDLSTARASNVLRYFTQLKGQDPTRF 208

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           S   G+  +R K+ +      + NRR++IL+    
Sbjct: 209 SAA-GYGEYRPKVDNSTDENRAQNRRVNILIVSNN 242



 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF-GKNLM 77
           +K    +       W   Y+D +T+LM FF++++ ++  D    +AI Q F+   GK+  
Sbjct: 3   RKKKSSNNELTGDEWLGTYSDCVTLLMTFFVLLYSMSTVDAQKVQAISQAFSIMSGKSTD 62

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEH 105
           +  +    + + P    ++KI+ +I + 
Sbjct: 63  SILQYDMYQGSQPVLGGESKIENTIQQS 90


>gi|86751586|ref|YP_488082.1| hypothetical protein RPB_4488 [Rhodopseudomonas palustris HaA2]
 gi|86574614|gb|ABD09171.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 341

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 103/338 (30%), Gaps = 16/338 (4%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L++ FLV+    + +   K    Q  N     
Sbjct: 5   RGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNARIAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L          +   E                ++ V                       +
Sbjct: 65  LNDLLSLEKLGKLDIEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGELGKA 124

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              + +    +L +     + +        ++ +          + +       +RL   
Sbjct: 125 LESEKQLSARALAQVEVLNQQISALRRQLAALEEALEATERRDKESQGRIADLGQRLNLA 184

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +    LS   ++   +       R  I I       ++   FD   ++ LPE    L 
Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244

Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           K+   L        +    V+ + GHTD  P   + + NW LS  RA S  Q L+  GV 
Sbjct: 245 KLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGVP 304

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             R+    GFA  +    ++   +   NRRI++ + +R
Sbjct: 305 AQRLVAA-GFAEFQPLDTANTDEAYRRNRRIELKLTER 341


>gi|188996771|ref|YP_001931022.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931838|gb|ACD66468.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 264

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 8/153 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K++ +D  KKI   +  ++   N+   V  E    G+ I I+D     +F   S+    E
Sbjct: 76  KQKREDAKKKIKERVEQIIKKLNLEGKVSVEVIPMGVRIRILD---YILFPPCSTEINQE 132

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVS 305
              +L  I EV+  +   + + GHTD  P         NW LS  RA +  + L+ +G  
Sbjct: 133 YKELLNGIAEVIKEAKLPVEVEGHTDDIPPGPTCIYPSNWELSASRAAAVVRYLITAGNL 192

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              +    G+A  +    ++       NRRI+I
Sbjct: 193 PPYLFSAVGYADTKPISPNNSELGRKLNRRIEI 225


>gi|225849164|ref|YP_002729328.1| chemotaxis protein MotB [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643203|gb|ACN98253.1| chemotaxis protein MotB (Motility protein B) [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 265

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 10/191 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D +K     ++     S         P + +   +  KR+   + + +++   +  L   
Sbjct: 41  DKKKLASFVEAISAAFSFKPISTSAPPSIIEGVGVKQKREDTKKKIKERVEQIVKKL--- 97

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N+   V  E    G+ I I+D     +F+  S     E   +L  + EV+  +   + + 
Sbjct: 98  NLEGKVQVEVIPMGVRIRILD---YILFNPCSVEIKKEYQELLSSVAEVIKEANLPVEVE 154

Query: 270 GHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P         NW LS  RA S  + L++S      +    G+A  R    +   
Sbjct: 155 GHTDNIPPSGNCIYPSNWELSAARAASVVRFLIQSKNLPPAMFTAVGYADTRPIAPNTSE 214

Query: 328 --NSANRRIDI 336
              S NRRI+I
Sbjct: 215 IGRSMNRRIEI 225


>gi|39998119|ref|NP_954070.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
 gi|39985064|gb|AAR36420.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
          Length = 266

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 8/224 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            Q  +  I  +  S +      +                +  SI  +         K   
Sbjct: 38  GQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNAD 97

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              + +   +D     SS  + L+       V     R G+++S+ +      FD  S+I
Sbjct: 98  SKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEA---GFFDSGSAI 154

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK- 301
                  +L K+ E L+  +  + + GHTD  P  +     NW LS  RA +    L + 
Sbjct: 155 VKESAYPLLAKVAESLSAYSNPVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRS 214

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
                  IS   GF  +R    ++       NRR+DI++   +G
Sbjct: 215 YDFDPGAISAA-GFGEYRPIADNNTAEGRSKNRRVDIVLLSGEG 257


>gi|116694193|ref|YP_728404.1| flagellar motor protein MotB [Ralstonia eutropha H16]
 gi|113528692|emb|CAJ95039.1| Chemotaxis protein [Ralstonia eutropha H16]
          Length = 321

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 3/200 (1%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             +  +           L K  +        P  +++    +  +RL+ L +++   +  
Sbjct: 75  EKSSQTPSVIPGGGQDALRKDGDTMRARTNEPSDEQRRNEQQEAQRLRALKQRLEQIIEN 134

Query: 206 -LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             V       +L + T  G+ I I+D +N PMF   S+        +L++IG VL     
Sbjct: 135 NPVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSATVETYMRTILREIGPVLNELPN 194

Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            +S+ GHTDA+ + N      NW LS DRA ++ + L+  G+ E ++ ++ G A      
Sbjct: 195 KVSLSGHTDAANYSNGERTYSNWELSGDRANASRRELIAGGMQEGKVLRVLGLAATMPLD 254

Query: 323 ASDPMNSANRRIDILVEDRQ 342
             D +   NRRI I+V + +
Sbjct: 255 KEDLLAPVNRRISIVVLNHK 274



 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            + + II+++       P+   SWKI YADFMT +MA FLV+W++++ +  T + I +YF
Sbjct: 5   HDMRPIIVRR-AKSHARPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
               K  +   +      +      Q+ +    D    + +        N++++ QRL 
Sbjct: 64  RMPLKVAIVGGEKSSQTPSVIPGGGQDALRKDGDTMRARTNEPSDEQRRNEQQEAQRLR 122


>gi|224825740|ref|ZP_03698844.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224601964|gb|EEG08143.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 271

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
                T    ++ +         + +    +K + RL  LA  +   +  LV       V
Sbjct: 66  QTTPPTGGANTMIEVAQNKPVAKAVKGEQQLKEQARLGSLASDLQKVMEPLVKGG---QV 122

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
               +  G+ I I D     +F  + + P P+++ VL ++ +VL+     I++ G TD  
Sbjct: 123 KITQSPKGVTIEIRDS---ALFPIAQAQPAPQSLQVLAQMAKVLSQVDNPITVEGFTDNI 179

Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           P RN     NW LS  RA S  ++ +++G++  R+  + G A +     +        NR
Sbjct: 180 PIRNTFYPSNWELSAARAGSVVRLFVENGIAPARLVAV-GRAENLPVADNTSEEGRASNR 238

Query: 333 RIDILVED 340
           R+ I V  
Sbjct: 239 RVSITVRS 246



 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 59/167 (35%), Gaps = 9/167 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   +D   N   W + YADF+T+L AFF+VM+ I++ ++   + +         +   
Sbjct: 3   RRRRSEDEHENHERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSSAI----VDAFR 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHIT-----KNSVDLKIGSTNQKKQYQRLENNIFY 133
               I  +  PP   +   I+++ ++ +      +  +  +    +     Q++   +  
Sbjct: 59  TGTTISLQTTPPTGGANTMIEVAQNKPVAKAVKGEQQLKEQARLGSLASDLQKVMEPLVK 118

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
               + ++  K       +                +        LS+
Sbjct: 119 GGQVKITQSPKGVTIEIRDSALFPIAQAQPAPQSLQVLAQMAKVLSQ 165


>gi|308066932|ref|YP_003868537.1| chemotaxis motB protein (Motility protein B) [Paenibacillus
           polymyxa E681]
 gi|305856211|gb|ADM67999.1| Chemotaxis motB protein (Motility protein B) [Paenibacillus
           polymyxa E681]
          Length = 275

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 73/326 (22%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK       +   SW + Y+D MT+L+A F+V++ +++ D    + + Q  +        
Sbjct: 3   KKRHEPHEEHADESWLLPYSDLMTLLLALFIVLFGMSSLDAKKFETMAQSLSAAFN---- 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              G+ D       SSQ+       E +++        ++  +KQ  + E         Q
Sbjct: 59  GGTGVLDHSA-ANPSSQSMDMGKNKEQVSQPVKSKATSTSELQKQLAQREEEDLKKLKKQ 117

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             ++ +N+        K       +  S N               L    +  ++  A+K
Sbjct: 118 MDQYIQNNGLTPLLNTKLNQSQLMITISDN--------------ALFSSGQAEVKPEARK 163

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++ ++S ++       V+       + IS                               
Sbjct: 164 LAKSISSMLQQFPGYDVIVSGHTDNVPIS------------------------------- 192

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                               +    N+ LS  R+ +  ++L+ +  +   +   I G+  
Sbjct: 193 -------------------NSQFPSNFDLSAKRSLNFLRILLLNPDLDPTKFVSI-GYGE 232

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
           +R   ++      S NRR++I V  +
Sbjct: 233 YRPLASNQDGQGRSKNRRVEISVLRK 258


>gi|110635517|ref|YP_675725.1| hypothetical protein Meso_3188 [Mesorhizobium sp. BNC1]
 gi|110286501|gb|ABG64560.1| OmpA/MotB [Chelativorans sp. BNC1]
          Length = 343

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 106/345 (30%), Gaps = 29/345 (8%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70
           +++    D           + D   T+L+A       F+V     + +   +       N
Sbjct: 7   RRRERTVDYWPG-------FVDALATLLLAIMFLLSVFVVAQYFLSREISGRDEALDRLN 59

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                L              E           D    ++ +   + S    +        
Sbjct: 60  AQINELTQLLALEKANFQDAEDQIATLRASLADAEAEQSRLQQILSSGAGSEAAANERIG 119

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                  Q+ +  + +L++     + +        ++            +         +
Sbjct: 120 ELTGELDQERQISQRALSQVELLNQQISALRQQIAALEDALEASERRDRESNTKIADLGR 179

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248
           RL     +    L+   +D   +     + R  I I       ++  +F   ++   P  
Sbjct: 180 RLNVALAQRVQELNRYRSDFFGRLREILSDREDIRIVGDRFVFQSEVLFASGATEINPNG 239

Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298
              ++K+   +             V+ + GHTD  P       RDNW LS  RA +  + 
Sbjct: 240 QEEMRKLAGAILELQREIPPEINWVLRVDGHTDNIPLSGTGRFRDNWELSTARAVAVVKF 299

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           L++SGV  +R+    GF   +     +   +   NRRI++ + +R
Sbjct: 300 LIESGVPAERLVAA-GFGEFQPLDPENTTEARSRNRRIELKLTER 343


>gi|260574379|ref|ZP_05842383.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259023275|gb|EEW26567.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 280

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 94/310 (30%), Gaps = 62/310 (20%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL+MWI+ AT +  +K +  YF+P       +  G         
Sbjct: 31  AWKVAYADFVTAMMAFFLLMWILGATTEKQRKGVADYFSPTIPINRVSGGGEGMFGGDSV 90

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            S Q              +   +    N   + Q                    ++    
Sbjct: 91  FSEQTMPQSGTGASDRSPTEQNQARGENADAEAQAAAQIASVEKALTALGGESMTMEAAL 150

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                      L   I   +   L     +       +  L+D+AK ++  L        
Sbjct: 151 RHVVTKVTDEGLVIEIFDLQEAPLFAEGTDDP-----QPVLRDIAKMLAEVL-----GLA 200

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              V          I +ID     +                                   
Sbjct: 201 SNSVAVNGYVKAYPIMMIDNPVWDL----------------------------------- 225

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
                           S  RA +   ++  +G+  +R+ +ISG+A H+    +DP    N
Sbjct: 226 ----------------SAARAQAMRDLIQTAGLPANRVQRISGYADHKPV-TADPTAIRN 268

Query: 332 RRIDILVEDR 341
            R+++++  R
Sbjct: 269 NRVEVILLRR 278


>gi|86359103|ref|YP_470995.1| hypothetical protein RHE_CH03512 [Rhizobium etli CFN 42]
 gi|86283205|gb|ABC92268.1| probable outer membrane protein [Rhizobium etli CFN 42]
          Length = 343

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 100/315 (31%), Gaps = 15/315 (4%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +  L+  F+V   I + +   +  +    N     L              + +  N    
Sbjct: 30  IMFLLTVFVVGQFILSREITGRDEVLNRLNSQINELTQLLALEKGSNQDLQDAVANLQAS 89

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                  ++ +   + + +  +   +           +Q +  + +L++     + +   
Sbjct: 90  LATAEGDRSRLQALLNAGSGGQDAAQKRIGAMTQELDEQKQVSERALSQVELLNQQIAAL 149

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                ++              +        RL          L+   +D   +     + 
Sbjct: 150 RSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209

Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270
           R  I I       ++  +F    +   P+    + K+   L             V+ + G
Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPDGQTEMAKLAAALLDLAKEIPPEINWVLRVDG 269

Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           HTD  P       RDNW LS +RA S  + L+  GV  DR+    GF   +     D  +
Sbjct: 270 HTDNVPLAGTGRYRDNWELSSERAISVVKFLIGQGVPADRLVAA-GFGEFQPIAPGDTPD 328

Query: 329 SA--NRRIDILVEDR 341
           +   NRRI++ + ++
Sbjct: 329 ARATNRRIELKLTEK 343


>gi|257095366|ref|YP_003169007.1| flagellar motor protein MotD [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047890|gb|ACV37078.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 276

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              S+     +              K     ++K+ + +       L  +        V 
Sbjct: 60  PVNSSGQTPMVVPTPASVTKASLASKAQEAVKQKQREKMRNVAKEILEVMAPLIEQGKVR 119

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              T  G+ I I D     +F    ++  P+ I  +Q + EVL  +   I+I GHTD  P
Sbjct: 120 VLETSRGVTIEINDS---ILFSPGQAVLQPQLIKAMQSVAEVLVAADFPITIEGHTDNVP 176

Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRR 333
            +N     NW LS  RA +  ++   +G++  R++ I G+A  R    +      + NRR
Sbjct: 177 IKNTQFPSNWELSAVRATTVLRLFADAGIAAGRLTAI-GYADTRPVEPNLLADGRARNRR 235

Query: 334 IDILVED 340
           + IL++ 
Sbjct: 236 VSILIDS 242


>gi|262198644|ref|YP_003269853.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081991|gb|ACY17960.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 637

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 22/272 (8%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           DE   PE  +        D+   +   D      +     Q   +           +   
Sbjct: 370 DEDGCPELDNDGDGIPDEDDACPEQPEDFDGWEDDDGCPDQNDFDRDGDGILDDDDQCPD 429

Query: 145 NSLTRDSEKGKDLCKSTDLEKSI----------NKEENYFLPPLSKEKILAMKRKKRLQD 194
               +D  + +D C   D +             + E+                R + L +
Sbjct: 430 EPEDKDGFEDEDGCPDPDNDGDGILDVDDLCLNDPEDFDNFEDEDGCPDHDNDRDRILDE 489

Query: 195 LAKK-ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             +  +         D+           T + I I+D+     F+ +S+    E+  +L 
Sbjct: 490 DDQCPLEPETYNGNRDDDGCPDSGRVVVTDVSIDILDK---VYFEFNSANIKRESFPILD 546

Query: 254 KIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +   +  + ++  I   GHTDA      A  N RLS +RA S    L+K GV  DR+  
Sbjct: 547 AVAATIMGNPDIRLIEVQGHTDAR---GSASYNLRLSDERAKSVRAYLLKKGVEPDRVDA 603

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             G+   +   +S+    ++ NRR++ L+ +R
Sbjct: 604 -KGYGETKPIDSSNTEKAHATNRRVEFLIMNR 634


>gi|209965120|ref|YP_002298035.1| hypothetical protein RC1_1826 [Rhodospirillum centenum SW]
 gi|209958586|gb|ACI99222.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
          Length = 344

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 108/334 (32%), Gaps = 29/334 (8%)

Query: 30  LGSWKIVYADFMTVLMAFFLVM-WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
              W    +    +++  FL++ +++         +            +        +  
Sbjct: 18  WPGWVDALSSL--LMVIVFLLLVFVLAQV----YLSSALQGRDRQLAEVNRRIAELADML 71

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
             ER +   +   + +   +    L  G   Q              +     +    S  
Sbjct: 72  ALERETSGGLRADVAQLTDRLRSTLARGEQLQADIAALAGERDALAAREAGLKGSVESER 131

Query: 149 RDSEKGKDLCKSTDLEKSINKEE-NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
              ++ +   +  + + +  +E+       L   +    +++ ++ DL  +++  L+  V
Sbjct: 132 ALGDEARAQVELLNQQVAALREQLARVAAALEVSEGKGREQEAQIADLGNRLNVALADKV 191

Query: 208 ADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEV 258
            +       F       L    D R         +  +F   S          L ++ E 
Sbjct: 192 TELARYRSEFFGRLREALGERDDVRVVGDRFVFQSEVLFGSGSVELGEAGKERLSRLAET 251

Query: 259 LAH--------STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L             V+ + GHTD+ P R+     NW LS  RA +  + L+  G+  DR+
Sbjct: 252 LKEIAARVPPEVDWVLRVDGHTDSVPIRSARFPSNWELSTARATAVVKYLIDQGIPADRL 311

Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
              +GF  ++           + NRRI+I ++ R
Sbjct: 312 -AAAGFGQYQPLDPGTSAEALARNRRIEIKLDAR 344


>gi|226225701|ref|YP_002759807.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
 gi|226088892|dbj|BAH37337.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
          Length = 289

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 3/154 (1%)

Query: 188 RKKRLQDLAKKI-SSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPL 245
            ++  + + + I     +      +   V  + T+ G+ I +++ +R    F   SS   
Sbjct: 101 EQRTFEQMRQAILDKLATSDSLKRLNAQVDVQVTQEGLRIELVESERGDVYFPIGSSQMN 160

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGV 304
             T++ LQ IG+ L+   + + I GHTDA+PF   A   NW LS DRA +A +VL  +G+
Sbjct: 161 SATVLTLQLIGQELSPIAQSLIIEGHTDAAPFGRDASYTNWELSADRANAARRVLQAAGI 220

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
              RIS++ G+A  + ++ +DP   ANRRI +L+
Sbjct: 221 DPKRISEVRGYADTKPRVINDPKAPANRRISVLI 254



 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 12/168 (7%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           SWK+ YADF+T +MAFF+VMWI+   DD TK+AIE YF            G         
Sbjct: 26  SWKVAYADFVTAMMAFFMVMWILG-MDDKTKQAIEGYFANPVGYKKGYGAG--------- 75

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
             S      S    + ++ + + + ST Q+   Q  +  +  L+ S   +     +    
Sbjct: 76  --SSPLGTGSAVNALQRSPMRMIVRSTEQRTFEQMRQAILDKLATSDSLKRLNAQVDVQV 133

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +     +  + E+             S   +      + L  +A+ +
Sbjct: 134 TQEGLRIELVESERGDVYFPIGSSQMNSATVLTLQLIGQELSPIAQSL 181


>gi|146282902|ref|YP_001173055.1| flagellar motor protein MotD [Pseudomonas stutzeri A1501]
 gi|145571107|gb|ABP80213.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
          Length = 278

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 7/178 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                         ++       +  L  L +   S             +        I 
Sbjct: 70  EERPRTTEPDVSQVEDLTGPASGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIE 129

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284
           I +    ++ +F    ++P  +   ++ K+  +LA     + + G TD  P        N
Sbjct: 130 IEL---SSSLLFPSGDALPNDQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTN 186

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           W LS  RA S  ++L   GV+  R++ + G+   +    +      + NRR+ ++V  
Sbjct: 187 WELSAARAGSVVRMLAAQGVNPSRLAAV-GYGEFQPVADNATAEGRARNRRVVLVVSR 243



 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 40/116 (34%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K +          +  +
Sbjct: 3   RRRAPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSDSLVGVFNQVDRS 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
            K I   +  P  +  +   +            L       +   +     I    
Sbjct: 63  VKPIPIGEERPRTTEPDVSQVEDLTGPASGEPTLDPLERIAQSMRETFGELIANDQ 118


>gi|134298231|ref|YP_001111727.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134050931|gb|ABO48902.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
          Length = 236

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 12/156 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            LQ+L K++   +     +N+   V        + ++I D+    +FD  S++  P++  
Sbjct: 85  ELQELKKQLDQYIKE---NNMTTEVETNIINNHLTLTIRDR---ALFDSGSAVVKPQSRK 138

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYS-AYQVLMKSGVSED 307
           +++ +G +L    +  + + GHTD  P   N    NW LS  RA +    +L    +   
Sbjct: 139 IIKAMGSILQQYPKFEVLVAGHTDNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPR 198

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           R+  I G+  +R    +      + NRR+++++  +
Sbjct: 199 RLVAI-GYGEYRPIAENTTTEGRAKNRRVEVIINQK 233



 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   SW I YAD +T+L+A F+V++  +  D+    A+++  N    +    
Sbjct: 3   KHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGAGI 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
            +         +++      +   + + K 
Sbjct: 63  MESKSLSDQLIDKTEVKTDTVVELQELKKQ 92


>gi|75676928|ref|YP_319349.1| hypothetical protein Nwi_2744 [Nitrobacter winogradskyi Nb-255]
 gi|74421798|gb|ABA05997.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 342

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 111/346 (32%), Gaps = 31/346 (8%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L+  FLV     + +   K    +  N     
Sbjct: 5   RGRRNESGFNYWPGFVDALSTLVLAIVFLLTVFLVTQFFLSQEVTGKDKALEQLNARIAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                  + D  +  +    +  D          S + +               N     
Sbjct: 65  -------LTDLLSLEKLGKVSLGDEVSQLRAGLASAEAERDRIKGLYDGLAGAGNDAAGR 117

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +SQ ++   +     S     +   T    ++ ++       L   +    + + R+ DL
Sbjct: 118 DSQLNKALDSEKQISSRALAQVEVLTQQISALRRQLAALENALDASEKKDKESQNRIADL 177

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246
            ++++  L+  V +       F      IL +  D R         +   FD + +  LP
Sbjct: 178 GQRLNVALAKRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFQSEVFFDTAQATLLP 237

Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
           E    L K+   L        +    V+ + GHTD  P ++   + NW LS  RA S  Q
Sbjct: 238 EGKAELDKVAGALTDLDKQIPSEIAWVLRVDGHTDVRPIKSPVFKSNWDLSAARAISVVQ 297

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            L   GV   R+    GF   +         +   NRRI++ + +R
Sbjct: 298 YLASLGVPPQRLVAA-GFGEFQPLDPDATEEAYKRNRRIELKLTER 342


>gi|163856411|ref|YP_001630709.1| flagellar motor protein MotB [Bordetella petrii DSM 12804]
 gi|163260139|emb|CAP42440.1| flagellar motor component MotB [Bordetella petrii]
          Length = 312

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 3/198 (1%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GL 206
           + ++            ++   ++ +        +     + +  L+ L +++ S L    
Sbjct: 77  SAETSAIPGGGSDPLRDEGEVRKSDGSRVQSQVQSDAERRDRHALERLKRRLDSMLEENP 136

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           V  N    +L + T  G+ I I+D +  PMF   S+   P    +L+++G VL      I
Sbjct: 137 VLKNFRPQLLIDMTTEGLRIQIVDNQKRPMFATGSAEVQPYMRDILRELGPVLNELPNKI 196

Query: 267 SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           SI GHTDA+ +     A  NW LS DRA ++ Q L+  G++E ++ +I G +     +  
Sbjct: 197 SIAGHTDATQYARGERAYSNWELSADRANASRQELVAGGMAEGKLMRIQGLSSSMSLVKD 256

Query: 325 DPMNSANRRIDILVEDRQ 342
           DP  + NRRI ++V +R+
Sbjct: 257 DPYAAVNRRISLVVLNRR 274



 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 78/195 (40%), Gaps = 2/195 (1%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            N + +I  ++      P++ GSWKI YADF+T +MAFFLVMW+I+    +  + + +YF
Sbjct: 5   NNHRVVI--RRKRGGSRPHHGGSWKIAYADFITAMMAFFLVMWLISIVPKEELRGLAEYF 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               +  +T       E +       + +    +   +  S       ++ +++ +    
Sbjct: 63  RMPLRVALTGGPNYSAETSAIPGGGSDPLRDEGEVRKSDGSRVQSQVQSDAERRDRHALE 122

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +    +S   E+      R         +   ++   N++   F    ++ +       
Sbjct: 123 RLKRRLDSMLEENPVLKNFRPQLLIDMTTEGLRIQIVDNQKRPMFATGSAEVQPYMRDIL 182

Query: 190 KRLQDLAKKISSTLS 204
           + L  +  ++ + +S
Sbjct: 183 RELGPVLNELPNKIS 197


>gi|54297693|ref|YP_124062.1| flagellar motor protein MotD [Legionella pneumophila str. Paris]
 gi|53751478|emb|CAH12896.1| hypothetical protein lpp1744 [Legionella pneumophila str. Paris]
          Length = 273

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++  KS   +++      S + I     +K+ +   K     L+  +++           
Sbjct: 56  SEGMKSAFNQKDQNKATQSTDNIKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 115

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I   D +   +FD  S+   PE ++ L K+ E + +    + + G+TD  P    
Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172

Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS  RA +  ++L   G++  RI  ++G+        +        NRR++IL
Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231

Query: 338 VEDRQ 342
           +   +
Sbjct: 232 ITKNR 236



 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 46/144 (31%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K +    +   +   W + YADF+T+L AFF+VM+ I++ +    K++ +         
Sbjct: 7   MKSRQKKTEEHQDSHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQK 66

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                    +        +       D     N    ++   + K   Q     I   + 
Sbjct: 67  DQNKATQSTDNIKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAG 126

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKS 160
           S       +       K   L + 
Sbjct: 127 SLFDSGSADIKPEALIKLMKLAEK 150


>gi|148559624|ref|YP_001259565.1| hypothetical protein BOV_1656 [Brucella ovis ATCC 25840]
 gi|148370881|gb|ABQ60860.1| OmpA/MotB domain [Brucella ovis ATCC 25840]
          Length = 314

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 98/257 (38%), Gaps = 18/257 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC--KNSLTRDSEKGKDLC 158
           S  + +T+     +  S + +     L+ ++  + + +              +   K   
Sbjct: 60  SQIQELTQLLSLERSNSQDMQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAG 119

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +      +  +     L  +          ++++  LA+++   L+   +D   +     
Sbjct: 120 ELAQSLDAEKQVSARALNQVELLNQQIAALRRQIAALAQRV-QELNRYRSDFFGRLREIL 178

Query: 219 TTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISI 268
           + +  I I       ++  +F   S+   P+  V ++K+ + +             V+ +
Sbjct: 179 SDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRV 238

Query: 269 RGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            GHTD  P       RDNW LS  RA +  + L+ +GV  +R+    GF  ++    ++ 
Sbjct: 239 DGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLDTANT 297

Query: 327 --MNSANRRIDILVEDR 341
               + NRRI++ + +R
Sbjct: 298 ADARARNRRIELKLTER 314


>gi|209543669|ref|YP_002275898.1| hypothetical protein Gdia_1504 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531346|gb|ACI51283.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 326

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 51/349 (14%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71
           ++         L +W   Y D   T+LM        F++     +   + ++        
Sbjct: 3   RRRRQTH--AGLDAWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVVLNKRQQAMDQLAH 59

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L                      D+   E    +S+ L + S     +        
Sbjct: 60  QVAQLN---------------------DMLSLERGQNHSLQLSVASLRAAHEKDAAMETS 98

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                +Q +    N         + +       + + ++ +  +  L   +     R ++
Sbjct: 99  LTAQVAQTTAERDNQAHLAQASQQQVTDLGSQLEQLRQQLSAAMAVLDISQNEIRDRDRK 158

Query: 192 LQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           + DL  K++  L+  V              + +L       ++      ++  +F    +
Sbjct: 159 IDDLGLKLNVALADKVEQLQRYRSEFFGRLRDILQNQDGVQVVGDRFVFQSEVLFPPGGA 218

Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
              P+ I  ++ +                 ++ + GH D  P  +    NW LS  RA +
Sbjct: 219 ELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAIT 278

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             ++L+  G+S   +   +GFA  +     +     + NRRI+  + DR
Sbjct: 279 VVKLLIAEGISPHHL-AATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326


>gi|309388829|gb|ADO76709.1| OmpA/MotB domain protein [Halanaerobium praevalens DSM 2228]
          Length = 282

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               +  +++ + +    + +  +N+   V  E  R G++IS+       +++   +   
Sbjct: 82  QDYAQAPENIQQVMKQIDNYIENNNLSDKVNVENKRKGLVISLT---GEILYELGKADIR 138

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSG 303
            +   VL KI E+L      I I GHTD  P R      NW LS  RA +  + L+ +  
Sbjct: 139 EQGKEVLTKISEILKEIPNDIMIEGHTDDLPIRTAEFPSNWELSTARAVNVIKYLIEEKD 198

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               R+S   G++ +R    ++     + NRR++++V + Q
Sbjct: 199 FDPARLSAA-GYSEYRPVATNNSTEGRAENRRVEVVVLNSQ 238



 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          KK  +  D+     +W   + D MT+L+ FF++++  ++ D +  +            L 
Sbjct: 5  KKNKSDGDSGGGSPAWMTTFGDMMTLLLVFFVLLFSFSSMDVEKFQGFISALQNQLGVLQ 64

Query: 78 TASKGIFDE 86
                 D 
Sbjct: 65 GGKTITEDP 73


>gi|225874275|ref|YP_002755734.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
 gi|225793995|gb|ACO34085.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
          Length = 270

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 2/153 (1%)

Query: 188 RKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +K+ ++++  +IS  + + +    +   V    T  G+ I +++ +    FD  SS    
Sbjct: 83  KKQDIRNIKTQISEAMHAQIQLKALQNHVNMVVTPEGLRIELLEAKGGTFFDSGSSKLSA 142

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVS 305
               +L+ + + L      I+I G+TDA P+       NW LS DRA +A +++  SG+ 
Sbjct: 143 GGKEMLKLLAQQLGGVPNRITIEGYTDAKPYPGKDGYTNWDLSADRANAARRLMQASGLH 202

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
             +++++ G+    L++ + P +  NRRI I+V
Sbjct: 203 AGQVAEVRGYGDQNLRLPNKPFDPTNRRITIVV 235



 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
           + II+ +K       ++ G+WK+ YADF+T +M+ F+V+W++N +     K I  YF  
Sbjct: 4  HRPIIVIRKKVS-HGGHHGGAWKVAYADFVTAMMSLFIVLWLMNTSTPIK-KIIAGYFRD 61

Query: 72 FGKNLMTASK 81
             N      
Sbjct: 62 PKSNSALTGN 71


>gi|91976556|ref|YP_569215.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91683012|gb|ABE39314.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 273

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 62/321 (19%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +  +    W + +AD    LMA  L  +++         A         K +  + 
Sbjct: 3   KKKREEAHGGHGWFVTFAD----LMALLLAFFVM-------LVAFSTQDKDKLKIVAGSM 51

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           +  F  QN    S   + D        KN+  +    +  K     +  +          
Sbjct: 52  REAFGVQNDSRYSGIIENDGLPTRGKVKNTEHVNPELSTSKPAPGEVTRDEGV------- 104

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                      N +E       S     A++    + +L+K   
Sbjct: 105 ---------------------------NTKEEREFALASASLRQALQDLPEISELSKN-- 135

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V+FE T+ G+ + I+DQ    MF   S  P   T ++LQ++   L 
Sbjct: 136 --------------VMFEETKQGLNLEIMDQDGRAMFADGSKAPFERTRLLLQRLAAPLR 181

Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   +SI GHT A      +  N + LS DRA    Q+L + G+    I  ++G A  +
Sbjct: 182 ATPLRVSIVGHTSAGSVSQRSDYNGFDLSADRANVVRQILEREGLPVSHIFAVTGKADTQ 241

Query: 320 LKIASDPMNSANRRIDILVED 340
                DP  +ANRR+ I +  
Sbjct: 242 PLFPEDPSIAANRRVTITLMR 262


>gi|238758125|ref|ZP_04619305.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
 gi|238703663|gb|EEP96200.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
          Length = 364

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  Q ++  +   T          KS+D    I    +     + +     + 
Sbjct: 11  MWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSDSTSVIPGGGDDPTQQIGEVRKHIDS 70

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 71  EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 130

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+        NW LS DRA ++ + L
Sbjct: 131 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYATGERGYSNWELSADRANASRREL 190

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ + ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 191 LAGGLDDGKVLRVVGMASTMRLKEQTSDDPVNRRISILVLNKQ 233



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I +YF    K  +T+     D  +       +    
Sbjct: 1   MTAMMAFFLVMWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSDSTSVIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGS 117
             +     +S + +   
Sbjct: 61  IGEVRKHIDSEESRKEE 77


>gi|222053743|ref|YP_002536105.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221563032|gb|ACM19004.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 258

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 8/168 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P    K    K     +D     ++  + L+       V  E  R G+++S+ +      
Sbjct: 87  PQKAVKSGKTKSHAEEKDFKAVKAAIEAYLLKTGAQDKVSVEINRRGLVVSLKEA---GF 143

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           FD  S+I       +L  + E L + T  + + GHTD  P  +     NW LS  RA + 
Sbjct: 144 FDSGSAIVQQSAYSLLAHVAESLVNYTNPVRVEGHTDNVPINSRTFPSNWELSTARATNL 203

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            Q L+K      ++IS  +GF  +R    +      S NRR+DI++  
Sbjct: 204 VQYLIKYYEFEPEKISA-TGFGEYRPVADNTTVDGRSKNRRVDIVLLS 250


>gi|148974248|ref|ZP_01811781.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
 gi|145965945|gb|EDK31193.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
          Length = 324

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
            +         ++ L+ LA++I+  LSG+   + +  V    T  G  + I D    PMF
Sbjct: 102 DTSVLQGEFNSQQELELLAQRITQELSGI---DALGSVSVFVTPQGAKLVIADSDKGPMF 158

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            +  +   P    +L  +  +L +    + I GHTDAS ++     NW LS +RA SA  
Sbjct: 159 FRGGAKVTPFYQDLLLNLAGLLENIENKMIITGHTDASRYKGSRMTNWELSSNRANSARY 218

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            L K G+ E  I +++G +        +  +  NRRI++ + 
Sbjct: 219 YLNKGGLQERHIFQVTGMSDTAPVDYENTKSGINRRIELYIL 260



 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 2/156 (1%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q II KK     +   + G WK+  AD M  LM  FLV+WI+   D D +K +  YF 
Sbjct: 3   QPQIIIQKKGRRKRNELQHGG-WKVAMADLMISLMCLFLVLWILQVVDVDDQKKLLNYFA 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI-TKNSVDLKIGSTNQKKQYQRLEN 129
                +M          +       +         +   N   +  G  N +++ + L  
Sbjct: 62  YGNDPIMHLGTSESGGNSINPLPLPHVATSHYGADLHRINDTSVLQGEFNSQQELELLAQ 121

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            I    +   +    +           +  S     
Sbjct: 122 RITQELSGIDALGSVSVFVTPQGAKLVIADSDKGPM 157


>gi|325294743|ref|YP_004281257.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065191|gb|ADY73198.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 233

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
              + I   L  +       GV  E  + G  I +    +  +F   S  P  ETI ++ 
Sbjct: 84  KTRRAIEQKLQEIHQMLKKMGVKSEIAKYGTSIRLRINTDK-LFPPGSEKPYKETIPLIM 142

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++ + L      I+I GHTD  P R+     NW LS  RA S  ++ ++ G    ++S  
Sbjct: 143 EMCKKLKELELPITIEGHTDNVPIRSKIFPSNWELSAARAVSVLRLFIQCGYDPRKLSAA 202

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338
            G   +R    +      + NRRI+I++
Sbjct: 203 -GCGPYRPIAPNTTPEGRAKNRRIEIVI 229



 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLM 77
          +K   +       +W   + D M++L+ FF++++ ++    +   +AI+     FG + +
Sbjct: 3  RKKKEECKAP--PAWLTSFGDLMSLLLTFFILLYSMSTISLEKFYQAIKGIIQAFGGHYV 60

Query: 78 TASKGIFDEQNPP 90
             + +   +  P
Sbjct: 61 IHEERVIQGKRIP 73


>gi|162146328|ref|YP_001600787.1| hypothetical protein GDI_0503 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161784903|emb|CAP54446.1| putative outer membrane protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 326

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 51/349 (14%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71
           ++         L +W   Y D   T+LM        F++     +   + ++        
Sbjct: 3   RRRRQTH--AGLDAWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVVLNKRQQAMDQLAH 59

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L                      D+   E    +S+ L + S     +        
Sbjct: 60  QVAQLN---------------------DMLSLERGQNHSLQLSVASLRAAHEKDAAMETS 98

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                +Q +    N         + +       + + ++ +  +  L   +     R ++
Sbjct: 99  LTAQVAQTTPERDNQAHLAQASQQQVTDLGSQLEQLRQQLSAAMAVLDISQNEIRDRDRK 158

Query: 192 LQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           + DL  K++  L+  V              + +L       ++      ++  +F    +
Sbjct: 159 IDDLGLKLNVALADKVEQLQRYRSEFFGRLRDILQNQDGVQVVGDRFVFQSEVLFPPGGA 218

Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
              P+ I  ++ +                 ++ + GH D  P  +    NW LS  RA +
Sbjct: 219 ELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAIT 278

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             ++L+  G+S   +   +GFA  +     +     + NRRI+  + DR
Sbjct: 279 VVKLLIAEGISPHHL-AATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326


>gi|221635437|ref|YP_002523313.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
           roseum DSM 5159]
 gi|221157647|gb|ACM06765.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
           roseum DSM 5159]
          Length = 237

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 8/196 (4%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            ++  K    ++ L  + N +     PP         +  +    L+ +           
Sbjct: 41  QADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLG 100

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
              +G   E T  GI+I + D     +F    +   PE   VL  I  ++      I + 
Sbjct: 101 LDRQGAEVELTSEGIVIHLSDA---ILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVE 157

Query: 270 GHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326
           GHTD++P       DNW LS  RA +  + L   +G+   R+S   G+   R + +++  
Sbjct: 158 GHTDSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAA-GYGEFRPRASNETV 216

Query: 327 -MNSANRRIDILVEDR 341
                NRR+DI++   
Sbjct: 217 EGRRKNRRVDIVIVQP 232



 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 5/186 (2%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN----- 70
           + +++   +    NL  W I YAD +T+L+ FF+VM+ I+  D    + +          
Sbjct: 1   MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNL 60

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                       +   +  P  ++   +   +    T+  +D +        +   +  +
Sbjct: 61  DVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLS 120

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L    Q+E    +          +    +  +     ++   PP S      +   +
Sbjct: 121 DAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDSTPPPPGSYPDNWELSAMR 180

Query: 191 RLQDLA 196
            +  + 
Sbjct: 181 AVNTVR 186


>gi|326792989|ref|YP_004310810.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
 gi|326543753|gb|ADZ85612.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
          Length = 240

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 8/196 (4%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DS+K ++L  S      I +         +     ++   + +    +  +     L   
Sbjct: 39  DSKKYEELAGSLSNSLGILQGGVGMSNANAAGTDSSIPFHQTISASQEIQTKLKDYLETH 98

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++ + V       G+ +S  D     +FD   +         L +I ++L   T  + + 
Sbjct: 99  DLTEQVSLHVEPQGLTLSFDDN---ILFDSGKADIQSAYKKNLLEICDILKTFTNDVVVE 155

Query: 270 GHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP- 326
           GHTD  P        NW L+  RA +   + +  G +   ++S IS +  +R   ++D  
Sbjct: 156 GHTDNLPIHTSQFSSNWELASIRAINVVHLFIDEGKLPASKLSAIS-YGEYRPIASNDTP 214

Query: 327 -MNSANRRIDILVEDR 341
              + NRRIDI++   
Sbjct: 215 EGRAKNRRIDIILLSS 230



 Score = 77.3 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KKK   +    N   W + Y+D +T+LM FF+VM+ ++  D    + +    +     
Sbjct: 1   MAKKKPKKE----NSERWLLTYSDLITLLMIFFVVMYSMSNVDSKKYEELAGSLSNSLGI 56

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           L              + S      +S  + I 
Sbjct: 57  LQGGVGMSNANAAGTDSSIPFHQTISASQEIQ 88


>gi|257092877|ref|YP_003166518.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045401|gb|ACV34589.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 189

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 11/165 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +++   L    K  +     L  +     V  +     + ++++D+     F   S+
Sbjct: 25  KQEVQQVDTLSVQNKAYAQLTQQLQTEIQADQVKIKQLEGRLTVTLVDEIV---FSSGSA 81

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR----NIARDNWRLSLDRAYSAYQ 297
               +    + KI   L ++     +  G+TD +P      +    NW LS  RA    +
Sbjct: 82  EMNMKGRATIDKIVGTLQNAAGKRIVVEGYTDNTPIGPGLRSRYPTNWELSTARACDVVR 141

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L  +G+   R+    GF  ++   A+D     S NRRIDI++ D
Sbjct: 142 YLQAAGIDPVRLEAA-GFGEYQPVAANDTPAGRSQNRRIDIVLMD 185


>gi|302342669|ref|YP_003807198.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639282|gb|ADK84604.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 244

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 8/155 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +     +          N+   V        +++ +   +   +F+  SS   P+ + VL
Sbjct: 93  RQTDPIMQDIREVTDQKNLDDVVEVIDQGDKVILRV---KGQLLFNTGSSDINPQALGVL 149

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           + I +V+  +      ++GHTD+ P  +     NW LS  RA +  + L++ GVS  R++
Sbjct: 150 KAIADVVDRNPGWRLDVKGHTDSRPISSVKFASNWELSSLRATAVLRYLIEQGVSPSRLT 209

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
             +G+A  +  +        + NRR++ ++E ++G
Sbjct: 210 A-TGYADTQRLVPDSSEENMARNRRVEFVLEKQKG 243



 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 4/112 (3%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           DD       W + YAD +T+L+ FF++M  +   D +  + I           +     I
Sbjct: 15  DDAGEEGREWLVTYADMVTLLLTFFVMMLSLARLDTERFEQIVTSIQYSLGASVAPGGRI 74

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                  +     ++ LS       + +   I     +K    +   I    
Sbjct: 75  ----GRIDAHDTKRMSLSELTGRQTDPIMQDIREVTDQKNLDDVVEVIDQGD 122


>gi|317403796|gb|EFV84276.1| chemotaxis protein MotB [Achromobacter xylosoxidans C54]
          Length = 329

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              S + ++       +         +           +     + + RL++L K++ + 
Sbjct: 72  GGPSSSAETSAVPGGGRDPLRNDGDERRAQGNRVEAQPKGDAERRDQHRLENLKKRLENV 131

Query: 203 LSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +    V  +    +L + T  G+ I IID +N PMF    +   P    +L+++G VL  
Sbjct: 132 IENSPVLKSFRPQLLIDMTTEGLRIQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNE 191

Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +SI GHTDAS +     A  NW LS DRA ++ Q L+  G++E ++ +I G +   
Sbjct: 192 LPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESKVMRIQGLSSSM 251

Query: 320 LKIASDPMNSANRRIDILVED 340
             +  DP  + NRRI ++V +
Sbjct: 252 SLVKDDPYAAVNRRISLVVLN 272


>gi|302341787|ref|YP_003806316.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301638400|gb|ADK83722.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 354

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 110/344 (31%), Gaps = 33/344 (9%)

Query: 3   SHGDKNQENDQFIIIKKKV--AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
              + N  +   I+ ++    A         S+ +  +D M +L+ FF++++ ++     
Sbjct: 36  PRANANAADSDTIVRRRLRPLARFAQGEESPSFYLSLSDLMCLLLVFFVLIYSLS----- 90

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                               +   D+  P ++++    + +    I        + +   
Sbjct: 91  ------------------GHEKPTDQPGPAQQAAVEIAEPAEPAQIASAPAAPGLPNAQA 132

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                         +             + + + + + +   L++++    +      + 
Sbjct: 133 APDDLSRAALALASAGQSDPALADQPAPQPTPEPQPVDRGVTLDRALLTMVSASTATPAD 192

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      L D  +  +       A    +G+   +    ++I + +      FD  
Sbjct: 193 AVATEENSLDSLLDQLRAAAGEGMPGAAGQPAEGLQITSAEGRLVIRLPENIT---FDLG 249

Query: 241 SSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298
            ++  P     L ++  V L +    + + GHTD  P        NW LS  RA +  + 
Sbjct: 250 QALLKPVMAETLGRLAPVVLRNPQCQVIVTGHTDDLPISTAQFASNWELSAARAAAVARA 309

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L   GV   R+  I G A     + +D       NRR++I +  
Sbjct: 310 LTAHGVPAGRLH-IRGMADQSPLLPNDSPENRQQNRRVEIELRA 352


>gi|85714417|ref|ZP_01045405.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
 gi|85698864|gb|EAQ36733.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
          Length = 342

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 116/346 (33%), Gaps = 31/346 (8%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +    +   N    +    +  +     L++ FLV+    + +   K    +  N     
Sbjct: 5   RGRRNESGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVTGKDKALEQLNARIAQ 64

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                  + D  +  +    +  D          S + +        +      N     
Sbjct: 65  -------LTDLLSLEKLGKVSLGDEVSQLRAGLASAEAERDRIKGLYEGLAGAGNDAAGR 117

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           NSQ ++   +     +     +   T    ++ ++       L   +    + + R+ DL
Sbjct: 118 NSQLNKALDSEKQISARALAQVEVLTQQISALRRQLAALEDALDASEKKDKESQNRIADL 177

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246
            ++++  L+  V +       F      IL +  D R         +   F+ + +I LP
Sbjct: 178 GQRLNVALAKRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFQSEVFFETAQAILLP 237

Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
           E    L KI   L        +    V+ + GHTD  P  +   + NW LS  RA S  Q
Sbjct: 238 EGKSELDKIANALTDLDKQIPSEIAWVLRVDGHTDVRPINSPVFKSNWDLSAARAISVVQ 297

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            L+  GV   R+    GF   +        ++   NRRI++ + +R
Sbjct: 298 YLVSRGVPPQRLVAA-GFGEFQPLDPGTTDDAYKRNRRIELKLTER 342


>gi|297538888|ref|YP_003674657.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297258235|gb|ADI30080.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 272

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 7/194 (3%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                  +   + +++     +    + PL    + + K ++  + + K      + L  
Sbjct: 63  GAGHLKTNGSLNPNIKSKPQNQAGSLIKPLPLTYLYSEKMRREREAMTKMGIDLSNKLSP 122

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 V       GI I I D     +F   S+        VL +I  ++  +  +I +
Sbjct: 123 LINDGKVRVMQNNRGIRIDINDSL---LFTPGSAELAAAASTVLSEIAPMIKDNDRLIQV 179

Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
            GHTD     N     NW LS  RA S  ++L  +GV+E R+S + GF   +    ++  
Sbjct: 180 EGHTDNIAIHNDLFYSNWELSAVRASSVVRMLSDTGVAESRLSAL-GFGSTQPITENNTE 238

Query: 328 --NSANRRIDILVE 339
              + NRR+ I++ 
Sbjct: 239 LGRAKNRRVSIMIL 252


>gi|126443721|ref|YP_001061208.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
 gi|126223212|gb|ABN86717.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
          Length = 311

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N        Q +         D   G    +S     +    +               +
Sbjct: 50  MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 109

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               LQ      +  +       +   V       G+ I+I D     MF++ S    P 
Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            I +L  +  VL   T  + I GHTDA+ +   ++  +NW LS  RA  A QVL   G+ 
Sbjct: 170 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 229

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             R+ +ISG       +  +P +  NRR+++L+   +
Sbjct: 230 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266



 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 5/173 (2%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
               +      II++        ++ G+WK+ +ADF   LMA F+V+W++N T +  +K 
Sbjct: 2   STNKESGHGPTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEKERKQ 60

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +       G+       GIF++++     +    D    + + + +       T    Q 
Sbjct: 61  VAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPDRMRRRTSGAARERTIDSLQQ 116

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +R          S+       +   + +  +     +D +    +  +   PP
Sbjct: 117 RRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169


>gi|89895779|ref|YP_519266.1| hypothetical protein DSY3033 [Desulfitobacterium hafniense Y51]
 gi|89335227|dbj|BAE84822.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 275

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 9/223 (4%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
           Y   + +     +  +S           E G      + +E     +      P   E  
Sbjct: 36  YSMSKVDAEKFQSIAESLSVALGGGTRVEIGASPSGPSLIETYPTNKPQEGKEPEDGEGN 95

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIIDQRNTPMFDKSSS 242
                        + I   L    ADN ++  L       G++ISI D     +F+  ++
Sbjct: 96  GDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVISIQDTL---LFESGAA 152

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301
           +  P+   +L KI  VLA +   I + GHTD  P   N    NW LS+ RA +   ++ +
Sbjct: 153 VITPKAREILDKINNVLASAPNYIKVEGHTDNLPINTNRFPSNWELSVLRATNVVHIMQE 212

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
             +  +++S  +G+  +R   A+D     + NRR+D+++   +
Sbjct: 213 I-IPAEQLSA-TGYGEYRPLAANDTEAGRARNRRVDLVILRSK 253



 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 59/230 (25%), Gaps = 5/230 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   +   +N   W + Y+D +T+LM FF+VM+ ++  D +  ++I +  +     L  
Sbjct: 3   RKRIEEPEKDNSERWLLTYSDLITLLMIFFVVMYSMSKVDAEKFQSIAESLS---VALGG 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++             +        E       +     T    +   +E     L    
Sbjct: 60  GTRVEIGASPSGPSLIETYPTNKPQEGKEPEDGEGNGDGTGADMENMTIETIKQKLDKFA 119

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
                +  L    E+   +    D    +S           +  +    +        + 
Sbjct: 120 ADNGIETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVE 179

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
               +             +        + I         +         P
Sbjct: 180 GHTDNLPINTNRFPSNWELSVLRATNVVHIMQEIIPAEQLSATGYGEYRP 229


>gi|288573018|ref|ZP_06391375.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568759|gb|EFC90316.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 240

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 8/175 (4%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +   LP        A + +++ Q   +      S L    + + V     + G+ +S+ D
Sbjct: 66  QEDPLPYGGSSGYDAGEERRQTQSTFQVDRELRSFLKDQEMEQDVSVIVDQRGVTVSLSD 125

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSL 289
           Q    +F        PE   +L K+GE L      +++ GHTD  P      RDNW LS 
Sbjct: 126 QL---LFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVEGHTDDRPLRGGPYRDNWGLSA 182

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RA      L+ + G+S   I +  G+   R  + +D     S NRR+D+++  +
Sbjct: 183 IRAAIVASYLVDAAGISPS-IVQAVGYGPFRPVVPNDSDENRSRNRRVDLVILSK 236



 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 59/166 (35%), Gaps = 5/166 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +++KK   ++       W   Y D MT+L+ FF++++  ++ D +  K +   F      
Sbjct: 1   MVRKKRRKEEK--GGAGWLATYGDMMTLLLTFFVLLFAFSSIDVEKFKKMMVSFQGALGV 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L         +++P      +  D   +   T+++  +     +  K  +  ++    + 
Sbjct: 59  LDGGKS---LQEDPLPYGGSSGYDAGEERRQTQSTFQVDRELRSFLKDQEMEQDVSVIVD 115

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
               +    + L           +   L   + +     +P L+ E
Sbjct: 116 QRGVTVSLSDQLLFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVE 161


>gi|148359324|ref|YP_001250531.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
 gi|296107371|ref|YP_003619071.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148281097|gb|ABQ55185.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
 gi|295649272|gb|ADG25119.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 267

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++  KS   +++      S + +     +K+ +   K     L+  +++           
Sbjct: 50  SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 109

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I   D +   +FD  S+   PE ++ L K+ E + +    + + G+TD  P    
Sbjct: 110 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 166

Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS  RA +  ++L   G++  RI  ++G+        +        NRR++IL
Sbjct: 167 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 225

Query: 338 VEDRQ 342
           +   +
Sbjct: 226 IAKNR 230



 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           K+K   +   N+   W + YADF+T+L AFF+VM+ I++ +    K++ +          
Sbjct: 4   KQKKTEEHQDNH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   +        +       D     N    ++   + K   Q     I   + S
Sbjct: 62  QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 121

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160
                  +       K   L + 
Sbjct: 122 LFDSGSADIKPEALIKLMKLAEK 144


>gi|311031291|ref|ZP_07709381.1| flagellar motor protein MotS [Bacillus sp. m3-13]
          Length = 254

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 8/191 (4%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
           +         +                    + ++    L + +    + L  +++   V
Sbjct: 62  NPSAVPFEHPTDFSINTESTNNQEDVAENEEQTQENEDSLQELLVEVQTFLAENDLEDVV 121

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
           +   T  GI++ + ++    +++ + +  LP     L K+G +L     ++ + GHTD  
Sbjct: 122 VANRTERGIVLVLEEK---VLYETAEARILPIAHPFLDKVGTLLTKIPNLVKVEGHTDNR 178

Query: 276 PFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SAN 331
           P        NW LS  RA S  + L+    +  +R   + G+   R  + +        N
Sbjct: 179 PISTEKFPSNWELSAARASSVIRYLVDAHDLDPERFIAV-GYGDTRPIVENTSNANYQKN 237

Query: 332 RRIDILVEDRQ 342
           RR++I++ D Q
Sbjct: 238 RRVEIVISDPQ 248



 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 10/134 (7%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++       +    W + ++D   +++ FF++++ ++  D    KA+ + F       
Sbjct: 1   MKRRKKKMSVESGAPKWMVTFSDLFMLVLVFFILLFSMSQIDLVKFKAVAESFKQVNILD 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                      NP     ++  D SI+   T N  D+       ++    L+  +  +  
Sbjct: 61  Y----------NPSAVPFEHPTDFSINTESTNNQEDVAENEEQTQENEDSLQELLVEVQT 110

Query: 137 SQQSEHCKNSLTRD 150
                  ++ +  +
Sbjct: 111 FLAENDLEDVVVAN 124


>gi|327404103|ref|YP_004344941.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319611|gb|AEA44103.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 293

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 94/230 (40%), Gaps = 9/230 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +T   ++    +        +   ++ +  L+      +        +    + ++  L 
Sbjct: 55  TTLADQKSANEQLTAVNKQLTDDKKNLQIKLSGQENLTESQLAQLSQKDKDLQNKDQDLQ 114

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +          R  +L KK++ TL   +       +  E     + +S+ D+    +
Sbjct: 115 EKERMLREMQAIIARQDELTKKLNQTLRDALVGFNSDELTMEIRDGKVYVSMSDKL---L 171

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI-ARDNWRLSLDRAYS 294
           F   S+   P+ +  L+ + +VL  + ++   + GHTD  P +    +DNW LS+ RA S
Sbjct: 172 FKSGSTGVEPKGVEALKVLADVLNKNPDIQILVEGHTDNVPIKTAVFKDNWDLSVARATS 231

Query: 295 AYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             ++L  K  V+  R++  SG   +  K ++D     + NRR +I++  +
Sbjct: 232 ITRMLNEKYAVAATRMTA-SGRGEYFPKASNDTTEGKAKNRRTEIILSPK 280


>gi|327481242|gb|AEA84552.1| flagellar motor protein MotD [Pseudomonas stutzeri DSM 4166]
          Length = 278

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 7/178 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                         ++       +  L  L +   S             +        I 
Sbjct: 70  EERPRTTEPDVSQVEDLTGPGSGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIE 129

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284
           I +    ++ +F    ++P  +   ++ K+  +LA     + + G TD  P        N
Sbjct: 130 IEL---SSSLLFPSGDALPNNQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTN 186

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           W LS  RA S  ++L   GV+  R++ + G+   +    +      + NRR+ ++V  
Sbjct: 187 WELSAARAGSVVRMLAAQGVNPSRLAAV-GYGEFQPVADNATAEGRARNRRVVLVVSR 243



 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 40/116 (34%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K +          +  +
Sbjct: 3   RRRAPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSDSLVGVFNQVDRS 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
            K I   +  P  +  +   +            L       +   +     I    
Sbjct: 63  VKPIPIGEERPRTTEPDVSQVEDLTGPGSGEPTLDPLERIAQSMRETFGELIANDQ 118


>gi|134280878|ref|ZP_01767588.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
 gi|254182925|ref|ZP_04889518.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
 gi|254299720|ref|ZP_04967169.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
 gi|125657184|gb|ABN48672.1| chemotaxis LafU protein [Burkholderia pseudomallei]
 gi|134247900|gb|EBA47984.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
 gi|157809631|gb|EDO86801.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
 gi|184213459|gb|EDU10502.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
          Length = 311

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N        Q +         D   G    +S     +    +               +
Sbjct: 50  MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 109

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               LQ      +  +       +   V       G+ I+I D     MF++ S    P 
Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            I +L  +  VL   T  + I GHTDA+ +   ++  +NW LS  RA  A QVL   G+ 
Sbjct: 170 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 229

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             R+ +ISG       +  +P +  NRR+++L+   +
Sbjct: 230 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266



 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 5/173 (2%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
               +      II++        ++ G+WK+ +ADF   LMA F+V+W++N T +  +K 
Sbjct: 2   STNKESGHGPTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEKERKQ 60

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +       G+       GIF++++     +    D    + + + +       T    Q 
Sbjct: 61  VAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPDRMRRRTSGAARERTIDSLQQ 116

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +R          S+       +   + +  +     +D +    +  +   PP
Sbjct: 117 RRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169


>gi|255305283|ref|ZP_05349455.1| chemotaxis protein [Clostridium difficile ATCC 43255]
          Length = 231

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +   L   V + N+   V  +    GIL+ + D     +FD   S    ++   L K
Sbjct: 85  KSNLKQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKADSKATLNK 141

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312
           + +++      I I GHTD  P ++     NW LS  RA S  +  + + G+   ++   
Sbjct: 142 VYDMIKMIKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-KLFSA 200

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339
           +G   ++  ++++     + NRR++IL+ 
Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 28/72 (38%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          +K        N  +W   YAD +T+++ FF++++  +  D +  K I             
Sbjct: 3  RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIANALKGQFSGTSM 62

Query: 79 ASKGIFDEQNPP 90
           S G    +  P
Sbjct: 63 FSTGSSTSEKSP 74


>gi|310817527|ref|YP_003949885.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390599|gb|ADO68058.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1779

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 12/280 (4%)

Query: 69   FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
            F        TA      E  P         D   DE       D             +  
Sbjct: 1506 FRILAGVNWTAKPRAKPEPAPVCPLGPEDKDGFEDED---GCADPDNDQDGFPDVSDQCP 1562

Query: 129  NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            N    ++  +  + C + +    +   D             E+                +
Sbjct: 1563 NVPETVNGFEDGDGCPDEVPAPVDSDGDGLTDDKDRCPNQPEDKDGFEDEDGCPDPDNDQ 1622

Query: 189  KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
               L    K  +        ++             +    I       F  +  I L  +
Sbjct: 1623 DGILDGSDKCPNEPEVINGREDEDGCPDQGEVNVRVEGKKILILQKVYFATNKDIILDRS 1682

Query: 249  IVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
              +L+++  VL  + +   I + GHTD+         N  LS  RA S    L++  G++
Sbjct: 1683 FSLLKQVAAVLRANPQLTKIRVEGHTDSQ---GSDAFNLDLSDRRAKSVRTYLIEKEGIA 1739

Query: 306  EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
             DR+  + G+   +    +D +     NRR++ ++    G
Sbjct: 1740 ADRLEAV-GYGETKPVDTNDTVAGRENNRRVEFIIVGAPG 1778


>gi|253702421|ref|YP_003023610.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251777271|gb|ACT19852.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 253

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D     ++  + L+       V    T+ G+++S+ +      FD  S+    ++  +L
Sbjct: 98  KDFRATKAAIEAYLLKVGAQAKVSVSVTQRGLVVSLKEA---GFFDSGSATLKQDSYALL 154

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           + +   L+  +  + + GHTD  P  +     NW LS  RA +  Q L K       +IS
Sbjct: 155 KDVVSSLSSYSNGLRVEGHTDNMPISSASFPSNWELSTARATNVLQYLTKQSDFDPYKIS 214

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              G+  +R    +        NRR+DI++   Q
Sbjct: 215 AA-GYGEYRPVADNSEAEGRGKNRRVDIVLLSEQ 247


>gi|298372336|ref|ZP_06982326.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275240|gb|EFI16791.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 705

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 80/278 (28%), Gaps = 18/278 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +  Y +            +  +  P +       D       T   V + +        
Sbjct: 433 GVADYMD--KCPDTPKGVEVDADGCPIDSDGDGVPDYLDKCPNTPRGVSVDVDGCPIDSD 490

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
              + ++     ++        +       G  +    D   +  KE    +      K 
Sbjct: 491 GDGVTDDKDKCPDTPNGISVDENGCPQDSDGDGVPDYKDKCPNTPKEVRGLVDENGCPKD 550

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +D    I           + K VL    +    I          FD   S 
Sbjct: 551 TDGDGIPDYKDECPTIKGVKENKGCPAVKKDVLKVFKQALHGIQ---------FDTGKST 601

Query: 244 PLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               +  VL  + +++ ++ +   +  GHTD+         N  LS  RA +  Q L+  
Sbjct: 602 IKSVSYGVLNMVVDIMKNNPDYNLVIAGHTDSQ---GNDDFNMTLSDKRAAAVRQYLIDK 658

Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           GV + R+  I G+   +    +      + NRR++  V
Sbjct: 659 GVEDARLQSI-GYGETKPVATNKTAKGRAQNRRVEFTV 695


>gi|295706900|ref|YP_003599975.1| putative flagellar motor channel protein [Bacillus megaterium DSM
           319]
 gi|294804559|gb|ADF41625.1| putative flagellar motor channel protein [Bacillus megaterium DSM
           319]
          Length = 203

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 8/163 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++++ ++ Q L   ++     L  + +   +  +    G+++ + +Q    +F+   + 
Sbjct: 43  ASVEKSQQSQKLDNILAKVQGYLKENKLQHVITAKRDERGVVLILQEQ---VLFETGQAD 99

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302
            L +    L ++G + +     I + GHTD  P        NW LS  RA    + L   
Sbjct: 100 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYRYPSNWELSAARASGVIRYLTNH 159

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
             +S +R   + G+   +  + +   +    NRR++I++ D +
Sbjct: 160 FSLSANRFEAL-GYGDTKPLVPNTSNDNLQKNRRVEIIISDPE 201



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 22/37 (59%)

Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           + +AD +T+++ FF++++ +++ D+   + +     
Sbjct: 1  MVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 37


>gi|284989545|ref|YP_003408099.1| OmpA/MotB domain-containing protein [Geodermatophilus obscurus DSM
           43160]
 gi|284062790|gb|ADB73728.1| OmpA/MotB domain protein [Geodermatophilus obscurus DSM 43160]
          Length = 313

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 108/314 (34%), Gaps = 62/314 (19%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + YAD MT+L+  F+V++ ++  D     A+ +                        
Sbjct: 25  RWLVSYADMMTLLLVLFVVLYAMSQVDQQKFAALAKGLAASFG----------------- 67

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                              V ++ G T +      L   +   S     +  + +    +
Sbjct: 68  -----------------GPVTVQPGPTPEGSVLDGLPGAVDIASAIVPDQTVEQAEVDAA 110

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                L ++  +                     A + +   +DL++      + L A   
Sbjct: 111 AAQAALAEARQV---------------------AAEARAEYEDLSEVREQIEAALAAAGH 149

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                FE    G+++ I+  +   +FD   ++  PE   +L  I   L      + + GH
Sbjct: 150 AGAARFEIDERGLVVHIVADQ--VLFDAEQAVLRPEGRQILDAIAPTLRGLPNSLGVEGH 207

Query: 272 TDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN 328
            +  P     I   NW LS  RA +  + L   GV   R+   +G++  R  +  +DP +
Sbjct: 208 ANHLPVTPGGIWPSNWELSAYRATTVVRYLTTGGVPGARMVA-NGYSDTRPLVPPTDPNS 266

Query: 329 -SANRRIDILVEDR 341
            S NRR+D++V   
Sbjct: 267 ISVNRRVDVVVLSD 280


>gi|116624960|ref|YP_827116.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228122|gb|ABJ86831.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 276

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K+ +  L +KI   L       ++   V    T  G+ I +++      F+    +P   
Sbjct: 96  KEDMSKLREKIEQALKTVPNFRDLKDHVEMTITSDGLRIELLETEAGMFFESGRPLPTST 155

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L+++ E L      + I GHTD+ PF       NW LS DRA +A +++  + V  
Sbjct: 156 GSELLKRLAEELGKMPNHLLIEGHTDSKPFSGDGTYTNWELSSDRANAARRLMESNAVRH 215

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           ++++++ GF   +L+   DP +++NRR+ ++V+
Sbjct: 216 EQVAQVRGFGDRQLRHPEDPEHASNRRVSVIVQ 248



 Score = 88.5 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           I + KK  +    ++ G+WK+ YADF+T +MA F+V+W+++A D+  K+AI  +FN    
Sbjct: 18  IFVIKKKKVMHGGHHGGAWKVAYADFVTAMMALFIVLWLMSA-DEKVKEAISAFFNNP-- 74

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                ++   D           K D+S      + ++       + K   +    +    
Sbjct: 75  -TGPGTQIGTDSAGTGNAIEVPKEDMSKLREKIEQALKTVPNFRDLKDHVEMTITSDGLR 133

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCK 159
               ++E      +          +
Sbjct: 134 IELLETEAGMFFESGRPLPTSTGSE 158


>gi|262194964|ref|YP_003266173.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262078311|gb|ACY14280.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 623

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 83/276 (30%), Gaps = 25/276 (9%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P E    +    S       N  D      +         +           ++  + + 
Sbjct: 347 PSEAEDIDGFADSDGCPDLDNDGDGIPDLEDGAPNEPEDRDGFEDGDGVPDRDNDGDGIN 406

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
            D +      ++ +  +  +   +                 ++ +D+             
Sbjct: 407 DDQDACPLKAETQNGFQDDDGCPDVADSDGDGLADDVDACPEQAEDMDSFQDEDGCPEEN 466

Query: 209 DNIVKGVLFETTRTG------------------ILISIIDQRNTPMFDKSSSIPLPETIV 250
           D     VL                         +    I+      F  + +  LP +  
Sbjct: 467 DRDGDTVLDRQDTCPDEPGKPEFEGCPTKPGAALRDGSIEIIEKVYFPNNQARILPRSFP 526

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL+++  VL +  ++ + + GHTD          N +LS  RA S    L++ G++ +R+
Sbjct: 527 VLKEVARVLNNHPDIELRVEGHTDDR---GNDTYNRKLSQRRADSVVAFLVEQGIAAERL 583

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           S   GF   R    +        NRR++ ++ +  G
Sbjct: 584 SA-KGFGEERPIADNASAQGRDQNRRVEFVITNGDG 618


>gi|332879143|ref|ZP_08446844.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682943|gb|EGJ55839.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 454

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 80/267 (29%), Gaps = 16/267 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           GI  +    +R +    D            +L              E++   +   ++  
Sbjct: 188 GITIKFGKQDRDNDGVADKDDKCPDVAGKPELNGCPDADGDGITDAEDSCPDVFGLKEFN 247

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-------- 193
            C ++         D C     +  +    +     ++ +     ++    +        
Sbjct: 248 GCPDTDGDGIADKDDECPEVAGKPELKGCPDADNDGIADKDDKCPQQAGPKENNGCPWPD 307

Query: 194 -DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +                        +   +     T +FD   S   PE+  VL
Sbjct: 308 RDGDGVLDKDDECPEEAGPASNKGCPEVTQEVQTQLNSFAKTILFDVGKSTIRPESATVL 367

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             I  VL        S+ G+TD          N RLS DRAYS    L+  G++  R+S 
Sbjct: 368 NNIVNVLNKYKNSKFSVEGYTDT---SGNKDKNQRLSEDRAYSVKAYLVDKGINPARLSA 424

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDI 336
             GF   +   ++        NRR++I
Sbjct: 425 -KGFGPEKPIASNKTKKGRELNRRVEI 450


>gi|114565809|ref|YP_752963.1| hypothetical protein Swol_0240 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336744|gb|ABI67592.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 281

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 8/196 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++    +   +                   E    +    + +DL    +          
Sbjct: 70  TQGPSMVEGLSGQMLPEGPGTIPDNQGQLDEVKRMIAEFIKAEDLTADEAQKGGSTSTTR 129

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
           +   ++      G++IS  D     +F   S    P    ++Q+IG  L      I + G
Sbjct: 130 LSDNLIVYEQERGLVISFKDTM---LFASGSDELTPRAREIIQQIGGALLKLPNFIRVEG 186

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN 328
           HTD  P        NW LS+ RA +   VL ++  +  +R+  I G+  +R  +A+D   
Sbjct: 187 HTDNRPINTAKFPSNWELSVLRASNVVHVLNENARIPAERL-SIIGYGENRPLVANDSDE 245

Query: 329 SA--NRRIDILVEDRQ 342
               NRR+DI++  ++
Sbjct: 246 GRAMNRRVDIVILKKK 261


>gi|319790061|ref|YP_004151694.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
 gi|317114563|gb|ADU97053.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
          Length = 233

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
                     +P    +    M+ ++++++   +I   L       +          T I
Sbjct: 62  YEQRVINGKNIPVQMPDMYPKMRSRQKIEEKLHEIRQMLKR-----LGINSEVAKFGTSI 116

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283
            + I   +   +F      P P+ I ++ +I   L      ++I G+TD +P        
Sbjct: 117 RLRINTDK---LFPPGEDRPYPQAIPIIMEICRKLKELDLPLTIEGYTDNTPIHTKRFPS 173

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           NW LS  RA +  ++ ++ G    ++S   G   +     ++     + NRRI+I++
Sbjct: 174 NWELSAARATAILRLFIQCGYDPKKLSAA-GCGPYHPIAPNNTPEGRAKNRRIEIVI 229



 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLM 77
          +K   +       +W   + D M++L+ FF++++ ++    +   +AI+     FG + +
Sbjct: 3  RKKKEECKAP--PAWLTSFGDLMSLLLTFFILLYSMSTISLEKFYQAIKGIIEAFGGHYV 60

Query: 78 TASKGIFDEQNPPERSSQ 95
             + + + +N P +   
Sbjct: 61 IYEQRVINGKNIPVQMPD 78


>gi|332799185|ref|YP_004460684.1| OmpA/MotB domain-containing protein [Tepidanaerobacter sp. Re1]
 gi|332696920|gb|AEE91377.1| OmpA/MotB domain protein [Tepidanaerobacter sp. Re1]
          Length = 226

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 72/170 (42%), Gaps = 10/170 (5%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +   +++ + ++  + L +KI   +     ++ + GV       G+++  ++    
Sbjct: 56  EAGDAGSFLISAEEQREFELLEEKIQKIID----EDNIGGVQVNLDERGLVVRFVE---G 108

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293
            +FD   +    +   +L K+  +L  S   I I GHTD  P        NW LS  RA 
Sbjct: 109 VLFDSGKADIRNDAKEILDKLAPLLIESHRQIRIEGHTDNLPIHTSEFPSNWELSTARAV 168

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +  + +++       I   +G++ +R    +D     + NRR+DI++   
Sbjct: 169 NVVKYMIERHNLSPYIISAAGYSEYRPIAPNDSEKNRALNRRVDIIILKS 218



 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/81 (8%), Positives = 22/81 (27%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              Y D +T ++ FF++++ +++ D                 +         +      +
Sbjct: 1   MTTYGDLITQVLIFFVLLFSLSSVDQKKFDMAMLSLQGSLGIIEGGMTLSEGDFIEAGDA 60

Query: 94  SQNKIDLSIDEHITKNSVDLK 114
               I              ++
Sbjct: 61  GSFLISAEEQREFELLEEKIQ 81


>gi|167034899|ref|YP_001670130.1| flagellar motor protein MotD [Pseudomonas putida GB-1]
 gi|166861387|gb|ABY99794.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 285

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +   S+   E         E  LA      L+ ++  +      L+  N    +      
Sbjct: 71  EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSN---QMTVRGNE 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             I I +    ++ +F    ++P  +   ++ K+  +L      + + G TD  P R   
Sbjct: 128 LWIEIELN---SSLLFGSGDAMPSDKAFAIIDKVANILKPFANPVHVEGFTDNLPIRTAQ 184

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              NW LS  RA S  ++L   GV+  R++ + G+  ++   ++D     + NRR+ +++
Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTADGRARNRRVVLVI 243

Query: 339 ED 340
             
Sbjct: 244 SR 245



 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           + K I   DEQ    R ++  +  S        + ++    T          +
Sbjct: 62  SMKPIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114


>gi|295399258|ref|ZP_06809240.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110141|ref|YP_003988457.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
 gi|294978724|gb|EFG54320.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215242|gb|ADP73846.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
          Length = 254

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            Q     N+         +     + E   ++ +         +K +  + K+ L ++ +
Sbjct: 47  AQIAQSFNAAFTGGTGVLEFQAPIEPEPLPSQPKQQNDQQNDNKKKIDKQEKEELHEVQE 106

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI + +   V + +   +    T  G+ I+I++     +FD  S+   P+   + ++I +
Sbjct: 107 KIDTYI---VNERLNGKLKTSLTEEGLAITILND---ILFDSGSAEVRPQDRQLAKEISQ 160

Query: 258 VL-AHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L  +    I I GHTD  P  N     NW LS+ RA +  ++L+++   + R+    G+
Sbjct: 161 MLVMNPPRNIIISGHTDNVPIHNAQFSSNWELSVMRAVNFMKLLLENPKLDPRLFSAKGY 220

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
              +   ++D       NRR++IL+ 
Sbjct: 221 GEFKPVASNDTPEGRMKNRRVEILIL 246



 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 4/113 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK       +   SW I Y+D +T+L+A F+V++  +  D      I Q FN       T
Sbjct: 3   KKKKQKHGEHINESWLIPYSDLLTLLLALFIVLFASSQIDQKKFAQIAQSFNAAF----T 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
              G+ + Q P E           ++    N   +      +  + Q   +  
Sbjct: 59  GGTGVLEFQAPIEPEPLPSQPKQQNDQQNDNKKKIDKQEKEELHEVQEKIDTY 111


>gi|312134920|ref|YP_004002258.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311774971|gb|ADQ04458.1| OmpA/MotB domain protein [Caldicellulosiruptor owensensis OL]
          Length = 257

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K   M  ++ + D+ K++   +     +      L      G+ I + D     +F+  S
Sbjct: 92  KNRQMTEEELINDIQKQVLGLIKEHGIEGKA---LVIQEERGLSILLKD----VLFNTGS 144

Query: 242 SIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298
           +   P+   V+ +I ++L       I I GHTD  P  N     NW LS  RA S  Q  
Sbjct: 145 AKLTPQAKEVVHEIAKILEKVPDNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVLQEI 204

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L  S V  +R   + G+  +R   ++      + NRR+ I++  
Sbjct: 205 LRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247


>gi|15893597|ref|NP_346946.1| chemotaxis motility protein B, gene motB [Clostridium
           acetobutylicum ATCC 824]
 gi|15023148|gb|AAK78286.1|AE007545_3 Chemotaxis motility protein B, gene motB [Clostridium
           acetobutylicum ATCC 824]
 gi|325507717|gb|ADZ19353.1| Chemotaxis motility protein B, gene motB [Clostridium
           acetobutylicum EA 2018]
          Length = 256

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +   GK +  + D     +           +        + +L+D+ KKI   ++    +
Sbjct: 56  NGASGKTVIGNQDAVDIKSTSSYVTQEASKQSASAEKAEENKLKDVKKKIDQYVNQ---N 112

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
            +   V       G+++SI+D     MFD   +   P+    L +IGE+L      I I 
Sbjct: 113 GMQGSVSTNLQEKGLVVSIVDTL---MFDTGRAEVKPDFQKKLVEIGEILKTIDNYIRIE 169

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD +P  N     N  L   R+ +   + +  S +   ++  +S +A  R    ++  
Sbjct: 170 GHTDNTPISNSQYASNIELGSARSNNVEHLFIDVSKIPVTQMYTVS-YADTRPVADNNSE 228

Query: 328 N--SANRRIDILVEDRQ 342
              + NRR+DI++ + +
Sbjct: 229 AGKARNRRVDIVILNSK 245



 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 5/130 (3%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    + P N   W + Y+D +T+LMAFF+VM+  +    +    I Q           +
Sbjct: 2   KRKKHEEPENSERWLLTYSDLITLLMAFFIVMYASSTVSKEKFAQIAQSLK--VGFNGAS 59

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K +   Q   +          + +  +K S   +    N+ K  ++  +     +  Q 
Sbjct: 60  GKTVIGNQ---DAVDIKSTSSYVTQEASKQSASAEKAEENKLKDVKKKIDQYVNQNGMQG 116

Query: 140 SEHCKNSLTR 149
           S         
Sbjct: 117 SVSTNLQEKG 126


>gi|118581870|ref|YP_903120.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504580|gb|ABL01063.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 271

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 8/203 (3%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                      ++  S+ +  + + +    + P S+     +K +   +D  +  SS  +
Sbjct: 58  MVQAGAPSPKMNILPSSQMSITPSIKPEVSVMPGSRGARGMVKTRATEKDFRQIKSSIEA 117

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            LV       V    TR G+++S+ +      FD   +   P    ++  I EV+   + 
Sbjct: 118 YLVKQGAQSKVNLTITRRGLIVSLKEA---GFFDSGQAQIKPTAYELINTIAEVMTQYSN 174

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
            + + GHTD  P        NW LS  RA +  + L+++ GV  D+I  ++G+A  R   
Sbjct: 175 PLRLEGHTDNVPINTSQFPSNWELSTARAVNGLKYLIRNFGVDPDKI-SVAGYAEFRPMA 233

Query: 323 ASDP--MNSANRRIDILVEDRQG 343
            +      + NRR+D+++   +G
Sbjct: 234 DNATPEGRAKNRRVDLVMLSNEG 256


>gi|115379068|ref|ZP_01466194.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
 gi|115363928|gb|EAU63037.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
          Length = 831

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 12/280 (4%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F        TA      E  P         D   DE       D             +  
Sbjct: 558 FRILAGVNWTAKPRAKPEPAPVCPLGPEDKDGFEDED---GCADPDNDQDGFPDVSDQCP 614

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           N    ++  +  + C + +    +   D             E+                +
Sbjct: 615 NVPETVNGFEDGDGCPDEVPAPVDSDGDGLTDDKDRCPNQPEDKDGFEDEDGCPDPDNDQ 674

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L    K  +        ++             +    I       F  +  I L  +
Sbjct: 675 DGILDGSDKCPNEPEVINGREDEDGCPDQGEVNVRVEGKKILILQKVYFATNKDIILDRS 734

Query: 249 IVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
             +L+++  VL  + +   I + GHTD+         N  LS  RA S    L++  G++
Sbjct: 735 FSLLKQVAAVLRANPQLTKIRVEGHTDSQ---GSDAFNLDLSDRRAKSVRTYLIEKEGIA 791

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
            DR+  + G+   +    +D +     NRR++ ++    G
Sbjct: 792 ADRLEAV-GYGETKPVDTNDTVAGRENNRRVEFIIVGAPG 830


>gi|261403961|ref|YP_003240202.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|329930219|ref|ZP_08283832.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
 gi|261280424|gb|ACX62395.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
 gi|328935241|gb|EGG31722.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
          Length = 268

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 9/218 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +   +   S+         T   +  K     T    + +K     +P  + ++  A   
Sbjct: 43  DARKFQEMSEAFSVALTGGTGVLDYSKTEPSDTPPNINDHKATTPSVPATTPDQRRAELM 102

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++  +DL K      + +  + +   +  +   + ++I+I D     +F    ++  PE 
Sbjct: 103 RQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITIRDN---ALFPSGEAVVKPEA 159

Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVS 305
             + + I ++L    +  I + GHTD  P  N     NW LS DRA      +L  S + 
Sbjct: 160 RKLAKAISQMLHKFPDYEIIVSGHTDNVPISNSKYPSNWDLSSDRALQFMKILLTNSELD 219

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             R   I G+  +     ++     + NRR+++ +  +
Sbjct: 220 PKRFMPI-GYGEYHPIADNNTAVGRAKNRRVEVSIIRK 256


>gi|119476294|ref|ZP_01616645.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
 gi|119450158|gb|EAW31393.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
          Length = 344

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 10/225 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S   + +Y+ L   +  +   Q     + +L                 +   + +     
Sbjct: 38  SQVNEGKYKVLSQTLSEVFARQGPGVPERTLDPFQIGDVVKSNPQSFIELEAENDGDNSG 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             + E+          + + +KI   L GL+  N    V    +   + + +   +++ +
Sbjct: 98  SSANEQSERGALPAEFEQINQKIDEALGGLLKSN---QVTVRGSEKWLEVEL---KSSLL 151

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F    S      + VL+ I  +L   T  I + G TD  P  +     NW LS  RA + 
Sbjct: 152 FGSGDSTLSVPAVGVLESIASILKDQTNPIRVEGFTDNQPINSVRYPSNWELSAGRASAV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            +  ++ G+S DR++ I G+  H+    +D     + NRR+ +++
Sbjct: 212 VKFFIEEGLSADRLAAI-GYGEHQPVTDNDSEEGRAENRRVVLMI 255



 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 42/124 (33%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +  I +   +   W + YADF+T+L AFF+VM+ I+  ++   K + Q  +         
Sbjct: 3   RRRIVEDSVSHDRWLVSYADFITLLFAFFVVMYSISQVNEGKYKVLSQTLSEVFARQGPG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                 +        ++     I+     +  +    +  Q ++               +
Sbjct: 63  VPERTLDPFQIGDVVKSNPQSFIELEAENDGDNSGSSANEQSERGALPAEFEQINQKIDE 122

Query: 140 SEHC 143
           +   
Sbjct: 123 ALGG 126


>gi|86135195|ref|ZP_01053777.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85822058|gb|EAQ43205.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 452

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 80/271 (29%), Gaps = 23/271 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +      G+ +    P+       D       T     +              ++   
Sbjct: 201 KNDACPEVAGLAEFNGCPDADGDGIKDSDDACPNTPGLASMNGCPDADGDGVADKDDMCP 260

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            +  ++ ++ C ++         D C +     +                         L
Sbjct: 261 DVKGTKANKGCPDTDGDGVVDKDDKCPTVAGPAANAGCPWPDTDGDGV-----------L 309

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
               K I+       A N        T     +I+   +    +F+   +         L
Sbjct: 310 DKDDKCINEV---GPASNNGCPEEVITKEATEVINFTAKS--ILFNSGRATFKAGVTKQL 364

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             I +V+A   +   SI GHTD+      +  N RLS  RA +    L+K+GV   R+  
Sbjct: 365 DAIVDVMAKYPKATFSIGGHTDS---SGSSSLNLRLSEKRAIAVRDYLVKNGVETTRLEA 421

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           I G+        +        NRR++I V +
Sbjct: 422 I-GYGEGFPIDTNKTRAGRANNRRVEIKVTN 451


>gi|310823400|ref|YP_003955758.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396472|gb|ADO73931.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 611

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 10/255 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
            ++  +L  D     ++VD        +  YQ  +  +   ++       ++        
Sbjct: 329 DKSAFELDSDGDGVPDTVDKCPTEKEDRDGYQDDDGCLDPDNDGDGISDGEDRCPNKPGT 388

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--KKRLQDLAKKISSTLSGLVADNI 211
            +      DL+   +   +       K               ++   +            
Sbjct: 389 VEHRGCPEDLDTDGDGIPDVLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPEN 448

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIR 269
                       +    I  +   +F+   +    ++  +L ++  VL  +     + I 
Sbjct: 449 NGCPYDSPPFVLVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIE 508

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD          N  LS  RA +    L   G+   R+S   GF   +    +D    
Sbjct: 509 GHTDNV---GSRNYNVDLSQRRAKAVLDYLAGKGIDRKRLSS-KGFGFDQPIATNDTPLG 564

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++  +   +
Sbjct: 565 RAKNRRVEFRLIKSE 579


>gi|326562151|gb|EGE12479.1| OmpA/MotB domain protein [Moraxella catarrhalis 7169]
 gi|326565667|gb|EGE15830.1| OmpA/MotB domain protein [Moraxella catarrhalis 12P80B1]
 gi|326566236|gb|EGE16388.1| OmpA/MotB domain protein [Moraxella catarrhalis 103P14B1]
 gi|326567112|gb|EGE17234.1| OmpA/MotB domain protein [Moraxella catarrhalis BC1]
 gi|326576199|gb|EGE26114.1| OmpA/MotB domain protein [Moraxella catarrhalis CO72]
          Length = 224

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 8/184 (4%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +  ++            K    A+            +      +       GV       
Sbjct: 45  VAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDTD 104

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281
              I++        F           +  L ++   +    E   +  GHTD++     A
Sbjct: 105 TGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDST---GQA 160

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             N  LS  RA S    L+  GV   RI  + G+   +   ++      + NRR+++++ 
Sbjct: 161 AYNQELSERRADSVRYYLINQGVDPYRIQTV-GYGMRQPIASNATEAGRAQNRRVELMIL 219

Query: 340 DRQG 343
             QG
Sbjct: 220 APQG 223


>gi|315617885|gb|EFU98483.1| chemotaxis protein motB [Escherichia coli 3431]
          Length = 265

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 3/202 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             ++T                    + +       + E++     + RL+ L   +   +
Sbjct: 24  ATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLI 83

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL   
Sbjct: 84  ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+   ++ ++ G A    
Sbjct: 144 PNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMR 203

Query: 321 KIASDPMNSANRRIDILVEDRQ 342
                P ++ NRRI +LV ++Q
Sbjct: 204 LSDRGPDDAVNRRISLLVLNKQ 225


>gi|33592172|ref|NP_879816.1| flagellar motor protein MotB [Bordetella pertussis Tohama I]
 gi|33596124|ref|NP_883767.1| flagellar motor protein MotB [Bordetella parapertussis 12822]
 gi|33601523|ref|NP_889083.1| flagellar motor protein MotB [Bordetella bronchiseptica RB50]
 gi|33571817|emb|CAE41326.1| chemotaxis protein MotB [Bordetella pertussis Tohama I]
 gi|33573127|emb|CAE36772.1| chemotaxis protein MotB [Bordetella parapertussis]
 gi|33575959|emb|CAE33038.1| chemotaxis protein MotB [Bordetella bronchiseptica RB50]
 gi|332381588|gb|AEE66435.1| flagellar motor protein MotB [Bordetella pertussis CS]
          Length = 315

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 3/201 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              S + ++       +     +   +                 + + RL+ L  ++ + 
Sbjct: 72  GGPSSSAETSAIPGGGQDPLRSQGDVRRAEGNRVEAQPMGDAERRDRHRLERLKVRLENL 131

Query: 203 LSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +    V  N    +L + T  G+ I I+D +N PMF   S+   P    +L+++G VL  
Sbjct: 132 IEESPVLKNFRPQLLIDMTTEGLRIQIVDNQNRPMFATGSADVQPYMRDILRELGPVLND 191

Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               ISI GHTDAS +     A  NW LS DRA ++ Q L+  G+ E ++ +I G A   
Sbjct: 192 LPNKISIAGHTDASQYARGERAYSNWELSADRANASRQELVAGGMHEGKVLRIQGLASSM 251

Query: 320 LKIASDPMNSANRRIDILVED 340
             +  DP  + NRRI ++V +
Sbjct: 252 SLVKDDPFAAVNRRISLVVLN 272



 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 66/179 (36%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ GSWKI YADF+T +MAFFLVMW+I+    +  K I +YF    +  +T       
Sbjct: 19  GGHHGGSWKIAYADFITAMMAFFLVMWLISIVPREELKGIAEYFRMPLRVALTGGPSSSA 78

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
           E +      Q+ +    D    + +        + +++ +     +     +   E    
Sbjct: 79  ETSAIPGGGQDPLRSQGDVRRAEGNRVEAQPMGDAERRDRHRLERLKVRLENLIEESPVL 138

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
              R         +   ++   N+    F    +  +       + L  +   + + +S
Sbjct: 139 KNFRPQLLIDMTTEGLRIQIVDNQNRPMFATGSADVQPYMRDILRELGPVLNDLPNKIS 197


>gi|74317269|ref|YP_315009.1| flagellar motor protein MotD [Thiobacillus denitrificans ATCC
           25259]
 gi|74056764|gb|AAZ97204.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 263

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 10/193 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                       + +         +   S  +  A++ +  + ++A  +   +  LV + 
Sbjct: 63  GGAFGKPVAELPVPQLPGTTLPPEVRQRSLRQQQAIEEQAHMTEVASNLLDVMGPLVKEG 122

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               V    +R G+ I I       +F+   +   PE++ VL+ +   L H    I I G
Sbjct: 123 ---KVRVTQSRRGVSIEINAN---VLFEPGRAELAPESLAVLRAVAAQLRHEPFNIEITG 176

Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           HTD  P  N     NW LS  RA S  ++L   G++  R+  I G    +   ++     
Sbjct: 177 HTDIVPISNSVFASNWELSAVRATSVVRLLADGGIAPSRLFAI-GREASQPIASNGTAEG 235

Query: 328 NSANRRIDILVED 340
            + NRR+++++  
Sbjct: 236 RARNRRVELMILS 248



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 50/159 (31%), Gaps = 6/159 (3%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           D    N   W + YADF+T+L AFF+VM+ ++A ++   + +               K +
Sbjct: 17  DSDHENHDRWLVSYADFITLLFAFFVVMYAVSAVNEGKYRVLANALGGAF------GKPV 70

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            +   P    +    ++       + +++ +   T        +   +      + ++  
Sbjct: 71  AELPVPQLPGTTLPPEVRQRSLRQQQAIEEQAHMTEVASNLLDVMGPLVKEGKVRVTQSR 130

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +      +          +L              L  E 
Sbjct: 131 RGVSIEINANVLFEPGRAELAPESLAVLRAVAAQLRHEP 169


>gi|219670208|ref|YP_002460643.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
 gi|219540468|gb|ACL22207.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 275

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 9/223 (4%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
           Y   + +     +  +S           E G      + +E     +      P   E  
Sbjct: 36  YSMSKVDAEKFQSIAESLSVALGGGTRVEIGASPSGPSLIETYPTNKPQEGKAPEDGEGN 95

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIIDQRNTPMFDKSSS 242
                        + I   L    ADN ++  L       G++ISI D     +F+  ++
Sbjct: 96  GDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVISIQDTL---LFESGAA 152

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301
           +  P+   +L KI  VLA +   I + GHTD  P   N    NW LS+ RA +   ++ +
Sbjct: 153 VITPKAREILDKINNVLASAPNYIKVEGHTDNLPINTNRFPSNWELSVLRATNVVHIMQE 212

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
             +  +++S  +G+  +R   ++D     + NRR+D+++   +
Sbjct: 213 I-IPAEQLSA-TGYGEYRPLTSNDTEAGRARNRRVDLVILRSK 253



 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 59/230 (25%), Gaps = 5/230 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   +   +N   W + Y+D +T+LM FF+VM+ ++  D +  ++I +  +     L  
Sbjct: 3   RKRIEEPEKDNSERWLLTYSDLITLLMIFFVVMYSMSKVDAEKFQSIAESLS---VALGG 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++             +        E       +     T    +   +E     L    
Sbjct: 60  GTRVEIGASPSGPSLIETYPTNKPQEGKAPEDGEGNGDGTGADMENMTIETIKQKLDKFA 119

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
                +  L    E+   +    D    +S           +  +    +        + 
Sbjct: 120 ADNGIETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVE 179

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
               +             +        + I         +         P
Sbjct: 180 GHTDNLPINTNRFPSNWELSVLRATNVVHIMQEIIPAEQLSATGYGEYRP 229


>gi|304407655|ref|ZP_07389306.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304343138|gb|EFM08981.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 263

 Score =  115 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 9/175 (5%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
                PP  K      + K++ Q+L    +   + +  + + + V       G+ I + D
Sbjct: 82  PAPVKPPEEKPNAALEEEKRKNQELENVFAIIQAYIKNNKLEEKVFVTNEEQGVSIRLSD 141

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLS 288
           Q    +FD   +        +L K+  +       ISI GHTD  P       RDNW LS
Sbjct: 142 Q---FLFDLGKADLKKAARPILDKLSSLFVKLDHPISIEGHTDNLPIQPGGEFRDNWALS 198

Query: 289 LDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             R+ S  +   + + +   +  +I+G+   R    +      S NRR++I +  
Sbjct: 199 AGRSLSVLRYFTEIAQLEPTKF-QIAGYGDTRPIAPNTTDANRSRNRRVEITILR 252


>gi|148546771|ref|YP_001266873.1| flagellar motor protein MotD [Pseudomonas putida F1]
 gi|148510829|gb|ABQ77689.1| OmpA/MotB domain protein [Pseudomonas putida F1]
 gi|313497822|gb|ADR59188.1| Flagellar motor protein MotD [Pseudomonas putida BIRD-1]
          Length = 285

 Score =  115 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +   S+   E         E  LA      L+ ++  +      L+  +    +      
Sbjct: 71  EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSD---QMTVRGNE 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             + I +    ++ +F    ++P  +   +++K+  +L      + + G TD  P R   
Sbjct: 128 LWVEIELN---SSLLFGSGDAMPSDKAFAIIEKVANILKPFANPVHVEGFTDNLPIRTAQ 184

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              NW LS  RA S  ++L   GV+  R++ + G+  ++   ++D     + NRR+ +++
Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVI 243

Query: 339 ED 340
             
Sbjct: 244 SR 245



 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           + K       P     +  + +   E + K+S   + G         +  ++    +   
Sbjct: 62  SMK-------PIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114

Query: 139 QSEHCKNSLTRDS 151
                + ++  + 
Sbjct: 115 LINSDQMTVRGNE 127


>gi|325271956|ref|ZP_08138407.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
 gi|324102904|gb|EGC00300.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
          Length = 285

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                K +    +   ++   E         E  LA      L+ ++  +      L+  
Sbjct: 59  PERSMKPIPVGEEKPLTVRPAEPLVNDSEQTEAGLAATNTDPLKTISDDVRDAFGDLIKS 118

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N    +        I I +    ++ +F    ++P  +   +++K+ ++L      + + 
Sbjct: 119 N---QMTVRGNELWIEIELN---SSLLFGSGDAMPSDKAFAIIEKVADILKPFANPVHVE 172

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           G TD  P R      NW LS  RA S  ++L   GV+  R++ + G+  ++   ++D   
Sbjct: 173 GFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAD 231

Query: 328 -NSANRRIDILVED 340
             + NRR+ +++  
Sbjct: 232 GRARNRRVVLVISR 245



 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           + K       P     +  + +   E +  +S   + G         +  ++    +   
Sbjct: 62  SMK-------PIPVGEEKPLTVRPAEPLVNDSEQTEAGLAATNTDPLKTISDDVRDAFGD 114

Query: 139 QSEHCKNSLTRDS 151
             +  + ++  + 
Sbjct: 115 LIKSNQMTVRGNE 127


>gi|1170998|sp|P46827|YTXE_BACME RecName: Full=Uncharacterized 24.6 kDa protein in ccpA 3'region;
           AltName: Full=ORF2
 gi|415666|gb|AAA22297.1| homologue to motB; ORF2; putative [Bacillus megaterium]
          Length = 218

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 8/163 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++++ ++ Q L   ++     L  + +   +  +    G+++ + +Q    +F+   + 
Sbjct: 58  ASVEKSQQSQKLDNILAKVQGYLKENKLQHVITAKRDERGVVLILQEQ---VLFETGQAD 114

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302
            L +    L ++G + +     I + GHTD  P        NW LS  RA    + L   
Sbjct: 115 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYAYPSNWELSAARASGVIRYLTNH 174

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
             +S +R   + G+   +  + +   +    NRR++I++ D +
Sbjct: 175 FSLSANRFEAL-GYGDTKPLVPNTSNDNLQKNRRVEIIISDPE 216



 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
          +K++            W + +AD +T+++ FF++++ +++ D+   + +     
Sbjct: 1  MKRRRKRYSAQ--SPKWMVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 52


>gi|310819615|ref|YP_003951973.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309392687|gb|ADO70146.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 593

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 73/257 (28%), Gaps = 23/257 (8%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           +      +D              +             ++    +   ++ + C ++    
Sbjct: 353 DSDGDGILDPDDKCPSVPGVARFQGCPDTDGDGLVDPDDKCPSVPGVERFQGCPDTDGDG 412

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            E   D C S      +                     K +L D      +         
Sbjct: 413 IEDASDKCPSVPGIHELKGCPPKDT------------DKDQLPDHRDNCPNEPGPAANQG 460

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISI 268
                          I I D+     FD   +  LP +  +L ++  ++    E   I I
Sbjct: 461 CPVQQPQLVEIQRDRIEIKDK---VYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWI 517

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326
            GHTD          N  LS  RA      L+  GV   R+    G+       ++D   
Sbjct: 518 EGHTDER---GSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVP-KGYGRQYPVASNDTVE 573

Query: 327 MNSANRRIDILVEDRQG 343
             +ANRR++ L   R+G
Sbjct: 574 GRAANRRVEFLTTPREG 590


>gi|146307821|ref|YP_001188286.1| flagellar motor protein MotD [Pseudomonas mendocina ymp]
 gi|145576022|gb|ABP85554.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 269

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 10/203 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              K  +  +S  G        ++     EE           +        LQ +A  + 
Sbjct: 41  NEGKYKILSESLTGVFNQPDRSIKPIPVGEERPRTGEPENTSLDDPSADATLQSIASSVR 100

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L+  +    +        I I +    ++ +F    ++P  +   +++K+ ++LA
Sbjct: 101 EAFGELIQSD---QLTVRGNEMWIEIEL---SSSLLFPSGDALPNNQAFDIIEKVAKILA 154

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G TD  P +      NW LS  RA S  ++L   GV   R++ + G+   +
Sbjct: 155 PYQNPVKVEGFTDNLPIQTSQFPTNWELSSARAASIVRMLAMDGVDPSRLAAV-GYGEFQ 213

Query: 320 LKIASDPM--NSANRRIDILVED 340
               +      + NRR+ +++  
Sbjct: 214 PIADNATAEGRARNRRVVLVISR 236



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + +           +
Sbjct: 3   RRRHHEDHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSESLTGVFNQPDRS 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSID 103
            K I   +  P         L   
Sbjct: 63  IKPIPVGEERPRTGEPENTSLDDP 86


>gi|108758523|ref|YP_629116.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
 gi|108462403|gb|ABF87588.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
          Length = 267

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 8/252 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           SQ K D    E               +  + +            Q+ E     L     +
Sbjct: 20  SQGKFDAKALEAENFAKGLNDEKGAREAAEAKVKALEEKIAELEQEREALNTRLGTAESR 79

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                      +  N +       L++      + K+ L+  + +  +    L  +    
Sbjct: 80  LTAGAAERRALEEKNSQLAALNDELARNTKKLAQAKEELEKRSSEYENLAQSLKQEISDG 139

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272
            +     +  + + + D+    +F   S+    E    L+KI + L      +I + GHT
Sbjct: 140 KIELSELKGKMTVQLKDK---ILFASGSARVGKEGEEALKKIADALKTVQGKIIRVEGHT 196

Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D  P        NW LSL RA +  + L  +GV        +G+  ++   A+D   +  
Sbjct: 197 DDVPTGGGQFPSNWELSLARAMAVVRSLQNAGVDPT-FLSAAGYGQYQPIAANDSAENRS 255

Query: 331 -NRRIDILVEDR 341
            NRRI+I++  +
Sbjct: 256 LNRRIEIVLAPK 267


>gi|152976910|ref|YP_001376427.1| flagellar motor protein MotB [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025662|gb|ABS23432.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
          Length = 265

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 9/203 (4%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D       E S +  E   +   + EK  A  +++ + +L     S    
Sbjct: 64  GGTGNKEFLSDQKPKKKEELSTDSLEAENIKKQATEKAEAEVKQREMNELKAVQKSIDQY 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTE 264
           +    +      + T  G++I+I++     +FD   +   PE++ +  ++   +L+ +  
Sbjct: 124 IEERQLSSSFKTKLTEQGLMITILEN---VLFDSGKADVKPESLNIANEMSHLLLSAAPR 180

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  Q +L    +   + S  +G+  +R   
Sbjct: 181 EITVSGHTDNVPITNSQFSSNWELSTQRAVNFMQVLLQNKQLDPAKFSA-TGYGEYRPAT 239

Query: 323 ASDPMN--SANRRIDILVEDRQG 343
           ++D     + NRR+++ +   QG
Sbjct: 240 SNDTSEGKAKNRRVEVFILPLQG 262


>gi|294501552|ref|YP_003565252.1| putative flagellar motor channel protein [Bacillus megaterium QM
           B1551]
 gi|294351489|gb|ADE71818.1| putative flagellar motor channel protein [Bacillus megaterium QM
           B1551]
          Length = 203

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 8/163 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++++ ++ Q L   ++     L  + +   +  +    G+++ + +Q    +F+   + 
Sbjct: 43  ASVEKSQQSQKLDSILAKVQDYLKENKLQNVITAKRDERGVVLILQEQ---VLFETGQAD 99

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302
            L +    L ++G + +     I + GHTD  P        NW LS  RA    + L   
Sbjct: 100 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYRYPSNWELSAARASGVIRYLTNH 159

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
             +S +R   + G+   +  + +        NRR++I++ D +
Sbjct: 160 FSLSANRFEAL-GYGDTKPLVPNTSNGNLQKNRRVEIIISDPE 201



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 22/37 (59%)

Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
           + +AD +T+++ FF++++ +++ D+   + +     
Sbjct: 1  MVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 37


>gi|257097127|pdb|2ZVY|A Chain A, Structure Of The Periplasmic Domain Of Motb From
           Salmonella (Crystal Form Ii)
 gi|257097128|pdb|2ZVY|B Chain B, Structure Of The Periplasmic Domain Of Motb From
           Salmonella (Crystal Form Ii)
 gi|257097129|pdb|2ZVZ|A Chain A, Structure Of The Periplasmic Domain Of Motb From
           Salmonella (Crystal Form Iii)
 gi|257097130|pdb|2ZVZ|B Chain B, Structure Of The Periplasmic Domain Of Motb From
           Salmonella (Crystal Form Iii)
          Length = 183

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 3/169 (1%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             + +++     + RL  L   +   +        +   +  +  + G+ I IID +N P
Sbjct: 3   QPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRP 62

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAY 293
           MF   S+   P    +L+ I  VL      IS+ GHTD  P+ N      NW LS DRA 
Sbjct: 63  MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRAN 122

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ + L+  G+   ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 123 ASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 171


>gi|307824498|ref|ZP_07654723.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307734482|gb|EFO05334.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 265

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 10/207 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            +   + +      +        +T     +       +    +     +K +K+L  ++
Sbjct: 37  GEAFSNKEQQGNEIAPIQIGTLPTTIQPIPLENPTAVEVEERRELSEEILKERKQLSQVS 96

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +    L+  + DN+   V  +     I + +  +    +F    +    + I VLQKI 
Sbjct: 97  GQFEQVLAPFIQDNL---VSVKKNDYWIELEMNSEM---LFLSGEAELSKKAIPVLQKIV 150

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           EV+     +++I GHTD  P  N   R NW LS  RA S     +K G++  R+S I G+
Sbjct: 151 EVINPLPNMVNIEGHTDNIPIDNIKFRSNWDLSSARATSVVHEFVKEGINPPRLSAI-GY 209

Query: 316 AHHRLKIASDPMNSA--NRRIDILVED 340
                   +        NRR+ +++  
Sbjct: 210 GEFHPIGDNKIEAGRFKNRRVVLVLMS 236



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 13/186 (6%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
            + YADF+T+L AFF+VM+ I++ ++   K +                      N  ++ 
Sbjct: 1   MVSYADFITLLFAFFVVMYSISSVNEGKYKTLSDSLGEAF-------------SNKEQQG 47

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           ++           T   + L+  +  + ++ + L   I            +         
Sbjct: 48  NEIAPIQIGTLPTTIQPIPLENPTAVEVEERRELSEEILKERKQLSQVSGQFEQVLAPFI 107

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             +L      +  I  E N  +  LS E  L+ K    LQ + + I+   + +  +    
Sbjct: 108 QDNLVSVKKNDYWIELEMNSEMLFLSGEAELSKKAIPVLQKIVEVINPLPNMVNIEGHTD 167

Query: 214 GVLFET 219
            +  + 
Sbjct: 168 NIPIDN 173


>gi|323191390|gb|EFZ76652.1| lateral flagellar motor protein B [Escherichia coli RN587/1]
          Length = 307

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H+ K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G                   DRA SA +VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|83717140|ref|YP_438356.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
 gi|167614802|ref|ZP_02383437.1| Chemotaxis lafU protein [Burkholderia thailandensis Bt4]
 gi|257141387|ref|ZP_05589649.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
 gi|83650965|gb|ABC35029.1| Chemotaxis lafU protein [Burkholderia thailandensis E264]
          Length = 311

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 2/217 (0%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N        Q +         D   G    +S     +    +               +
Sbjct: 50  MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPERVKRRTPGAARER 109

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               LQ      +  +       +   V       G+ I+I D     MF++ S    P+
Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            + +L  +  VL   T  + I GHTDA+ +   ++  +NW LS  RA  A Q+L   G+ 
Sbjct: 170 FVRLLTALVPVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMD 229

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             R+ +ISG       +  +P +  NRR+++L+   +
Sbjct: 230 VQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266



 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 67/177 (37%), Gaps = 8/177 (4%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M+++ +         II++        ++ G+WK+ +ADF   LMA F+V+W++N T + 
Sbjct: 1   MSTNKEAGHG---PTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEK 56

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +K +       G+       GIF++++     +    D    E + + +       T  
Sbjct: 57  ERKQVAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPERVKRRTPGAARERTID 112

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             Q +R          S+       +   + +  +     +D +    +  +   P 
Sbjct: 113 SLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169


>gi|182680245|ref|YP_001834391.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636128|gb|ACB96902.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 345

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 112/332 (33%), Gaps = 31/332 (9%)

Query: 37  YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           + D ++ ++   +++++++         + +      K L    + I D           
Sbjct: 18  FVDALSTMLL--VIIFLLSVFMLAQF-FLAREVTGKDKALSRLDRQINDLSTLLALEHAA 74

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
           K     +    K +++    +   +    +   +    +     +  + SL     + + 
Sbjct: 75  KDKAEQETGQLKATLEAAQTAAKAEATRLQELVDAGNQATQSAEDRARLSLRALDAEKQL 134

Query: 157 LCKSTDLEKSINKEENYF-------LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
             ++    +++N++              LS  +    + + ++ DL  +++  L+  V +
Sbjct: 135 STQAEAQVETLNQQIAALRGQLSSLQETLSASETRDQESRAQIADLGSRLNVALAQKVQE 194

Query: 210 NIVKGVLFETTRTGILISIIDQRNTP---------MFDKSSSIPLPETIVVLQKIGEVLA 260
                  F      +L    D R            +FD   +   P     L  +   L 
Sbjct: 195 LAHYRSDFFGRLRQVLGERPDLRIVGDRFVFQSELLFDSGQARLNPIGRQELDTLATALN 254

Query: 261 HS--------TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                       V+ + GHTD    ++     NW LS+ RA +    L   GV  DR+  
Sbjct: 255 DLVKTIPADLPWVMRVDGHTDKKQIKSVQFPSNWELSVARALAVVHYLTDKGVPPDRL-A 313

Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            +GF   +     D   +   NRRI++ + ++
Sbjct: 314 AAGFGSFQPLDPGDSEEALKRNRRIELKITEK 345


>gi|332981443|ref|YP_004462884.1| OmpA/MotB domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332699121|gb|AEE96062.1| OmpA/MotB domain protein [Mahella australiensis 50-1 BON]
          Length = 251

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 9/181 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                 +       + + L  +  +   +           +  +NI   V     +  IL
Sbjct: 61  GGRSMSSVPATGGDEGQDLEQRTNEPQDEFESLYEDMQRYIQQNNIAATVEMTENKMEIL 120

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRN-IA 281
           +   D     +F+   +  +P  + VL  I  VL    E I    I GHTD  P    + 
Sbjct: 121 LRFKDN---VLFESGKADIIPSALPVLNNIAGVLKTYKEQIGGVRIEGHTDNVPIHTVMF 177

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             NW LS  RA +  +  ++       +    G+  +     +D     + NRR+DI++ 
Sbjct: 178 PSNWELSTARAVTVLRYFVERQHLPPEMLSAVGYGEYHPVATNDTIEGRAKNRRVDIVIT 237

Query: 340 D 340
            
Sbjct: 238 R 238


>gi|167725893|ref|ZP_02409129.1| chemotaxis LafU protein [Burkholderia pseudomallei DM98]
 gi|167905052|ref|ZP_02492257.1| chemotaxis LafU protein [Burkholderia pseudomallei NCTC 13177]
          Length = 271

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            N        Q +         D   G    +S     +    +               +
Sbjct: 10  MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 69

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               LQ      +  +       +   V       G+ I+I D     MF++ S    P 
Sbjct: 70  TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 129

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305
            I +L  +  VL   T  + I GHTDA+ +   ++  +NW LS  RA  A QVL   G+ 
Sbjct: 130 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 189

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             R+ +ISG       +  +P +  NRR+++L+   +
Sbjct: 190 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 226



 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 4/133 (3%)

Query: 45  MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           MA F+V+W++N T +  +K +       G+       GIF++++     +    D    +
Sbjct: 1   MALFMVLWVMNVTPEKERKQVAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPD 56

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            + + +       T    Q +R          S+       +   + +  +     +D +
Sbjct: 57  RMRRRTSGAARERTIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQ 116

Query: 165 KSINKEENYFLPP 177
               +  +   PP
Sbjct: 117 GMFERRSDALNPP 129


>gi|296113807|ref|YP_003627745.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
 gi|295921501|gb|ADG61852.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
          Length = 224

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 8/149 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      +       GV          I++        F           +  L ++  
Sbjct: 80  YMERQAKQIEQQMQGTGVTVTHDTDTGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLAN 138

Query: 258 VLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +    E   +  GHTD++     A  N  LS  RA S    L+  GV   RI  + G+ 
Sbjct: 139 TMNQYHETTIVIVGHTDST---GQAAYNQELSERRADSVRYYLINQGVDPYRIQTV-GYG 194

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQG 343
             +   ++      + NRR+++++   QG
Sbjct: 195 IRQPIASNATEAGRAQNRRVELMILAPQG 223


>gi|70734060|ref|YP_257700.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf-5]
 gi|68348359|gb|AAY95965.1| motility protein, MotB family [Pseudomonas fluorescens Pf-5]
          Length = 372

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 73/334 (21%), Positives = 117/334 (35%), Gaps = 63/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q IIIK+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIIKRVKRFA-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       ++ I  S                    +       
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFKDPIGFS--------------------ESGTPYII 75

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           ++               +    +  K    +  +E    + E   L  L +E    ++  
Sbjct: 76  DLGGSPELAPDNTLNPEIKSQPQPDKVTVDADQVEGMAEQVERERLELLLQELQNKVEEN 135

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T  G+ I I+D  N PMFD  S+   P   
Sbjct: 136 PQLQKFKDQI----------------LFEITPDGLRIQIMDAENRPMFDSGSARLKPYFE 179

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 180 DILLAMADTIKTVPNKISISGHTDAKPYSGTGDFGNWELSANRANAARRALVAGGYPDPQ 239

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ GFA   L    DP N  NRRIDI+V  ++
Sbjct: 240 VARVVGFASSALFDRKDPFNPVNRRIDIVVLTKK 273


>gi|26991025|ref|NP_746450.1| flagellar motor protein MotD [Pseudomonas putida KT2440]
 gi|24986055|gb|AAN69914.1|AE016630_5 flagellar motor protein MotB [Pseudomonas putida KT2440]
          Length = 285

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +   S+   E         E  LA      L+ ++  +      L+  +    +      
Sbjct: 71  EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSD---QMTVRGNE 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             I I +    ++ +F    ++P  +   +++K+  +L      + + G TD  P R   
Sbjct: 128 LWIEIELN---SSLLFGSGDAMPSDKAFAIIEKVASILKPFANPVHVEGFTDNLPIRTAQ 184

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              NW LS  RA S  ++L   GV+  R++ + G+  ++   ++D     + NRR+ +++
Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVI 243

Query: 339 ED 340
             
Sbjct: 244 SR 245



 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           + K       P     +  + +   E + K+S   + G         +  ++    +   
Sbjct: 62  SMK-------PIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114

Query: 139 QSEHCKNSLTRDS 151
                + ++  + 
Sbjct: 115 LINSDQMTVRGNE 127


>gi|313500883|gb|ADR62249.1| MotB [Pseudomonas putida BIRD-1]
          Length = 346

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       Q+ I  S                         + +
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +          T  +++         +E    + E   L  L +E    ++  
Sbjct: 77  LGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274


>gi|152984991|ref|YP_001349219.1| flagellar motor protein MotD [Pseudomonas aeruginosa PA7]
 gi|150960149|gb|ABR82174.1| probable chemotaxis protein [Pseudomonas aeruginosa PA7]
          Length = 296

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 7/176 (3%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            +      P  +  +            L +   S             +        I I+
Sbjct: 71  EERPRTTEPERTSVEEQPSDNAASADSLQQIADSVRGAFGDLIASDQLSVRGNELWIEIT 130

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWR 286
           +    ++ +F    ++P      +++K+ ++LA     I + G TD  P  +     NW 
Sbjct: 131 LN---SSLLFPSGDALPNDAAFGIVEKVAKILAPYKNPIHVEGFTDDVPIHSQRYPTNWE 187

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS  RA S  ++L   GV   R++ + G+   +    +      + NRR+ +++  
Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAAGRAKNRRVVLVISR 242



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 39/94 (41%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + +           
Sbjct: 3   RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           + K I   +  P  +   +  +         S D
Sbjct: 63  SLKPIPIGEERPRTTEPERTSVEEQPSDNAASAD 96


>gi|15596658|ref|NP_250152.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAO1]
 gi|107100895|ref|ZP_01364813.1| hypothetical protein PaerPA_01001925 [Pseudomonas aeruginosa PACS2]
 gi|116049406|ref|YP_791791.1| flagellar motor protein MotD [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254234559|ref|ZP_04927882.1| MotD [Pseudomonas aeruginosa C3719]
 gi|254239810|ref|ZP_04933132.1| MotD [Pseudomonas aeruginosa 2192]
 gi|313106460|ref|ZP_07792691.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
 gi|9947413|gb|AAG04850.1|AE004575_9 MotD [Pseudomonas aeruginosa PAO1]
 gi|3721573|dbj|BAA33552.1| ORF2 [Pseudomonas aeruginosa]
 gi|115584627|gb|ABJ10642.1| chemotaxis protein, MotD [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126166490|gb|EAZ52001.1| MotD [Pseudomonas aeruginosa C3719]
 gi|126193188|gb|EAZ57251.1| MotD [Pseudomonas aeruginosa 2192]
 gi|310879193|gb|EFQ37787.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
          Length = 296

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 7/176 (3%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           ++      P  +  +            L +   S             +        I I+
Sbjct: 71  DERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +    ++ +F    ++P      +++K+ ++LA     I + G TD  P  +     NW 
Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS  RA S  ++L   GV   R++ + G+   +    +      + NRR+ +++  
Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + +           
Sbjct: 3   RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           + K       P     +       +    +        S +  ++      + F
Sbjct: 63  SLK-------PIPIGDERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAF 109


>gi|293395565|ref|ZP_06639848.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
 gi|291421884|gb|EFE95130.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
          Length = 330

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +   L     +       + RL  L +++   +        +   +L      G+
Sbjct: 86  GDDPTQLEGLVRKQLDSPEKQAEELRLNKLRERLDELIESDPRLKALRPHLLINMMDEGL 145

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IAR 282
            I IID +N PMF   S+        +L+ I  +L      IS+ GHTD  P+       
Sbjct: 146 RIQIIDSQNRPMFTTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDLPYATGERYY 205

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+SE ++ ++ G A           ++ NRRI ILV ++Q
Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITILVLNKQ 265



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 57/165 (34%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +  +I+ +K       ++ GSWKI YADFMT +MAFFLVMW++          I +YF 
Sbjct: 3   QNHPVILVRKRKAHQVAHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T       E +P      +   L        +S + +       K  +RL+  
Sbjct: 63  TPLKVALTTGNKSSSESSPIPGGGDDPTQLEGLVRKQLDSPEKQAEELRLNKLRERLDEL 122

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           I      +           D      +  S +             
Sbjct: 123 IESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFTTGSAQVES 167


>gi|218892666|ref|YP_002441535.1| flagellar motor protein MotD [Pseudomonas aeruginosa LESB58]
 gi|218772894|emb|CAW28706.1| MotD [Pseudomonas aeruginosa LESB58]
          Length = 296

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 7/176 (3%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           ++      P  +  +            L +   S             +        I I+
Sbjct: 71  DERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +    ++ +F    ++P      +++K+ ++LA     I + G TD  P  +     NW 
Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS  RA S  ++L   GV   R++ + G+   +    +      + NRR+ +++  
Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + +           
Sbjct: 3   RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           + K       P     +       +    +        S +  ++      + F
Sbjct: 63  SLK-------PIPIGDERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAF 109


>gi|296390172|ref|ZP_06879647.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAb1]
          Length = 296

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 7/176 (3%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           ++      P  +  +         +  L +   S             +        I I+
Sbjct: 71  DERPRTTEPERTSVEEQPSDNAASVDSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +    ++ +F    ++P      +++K+ ++LA     I + G TD  P  +     NW 
Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS  RA S  ++L   GV   R++ + G+   +    +      + NRR+ +++  
Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242



 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 2/124 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + +           
Sbjct: 3   RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           + K I      P  +       S++E  + N+  +               + I     S 
Sbjct: 63  SLKPIPIGDERPRTTE--PERTSVEEQPSDNAASVDSLERIADSVRDAFGDLIASDQLSV 120

Query: 139 QSEH 142
           +   
Sbjct: 121 RGNE 124


>gi|26991582|ref|NP_747007.1| flagellar motor protein MotB [Pseudomonas putida KT2440]
 gi|24986670|gb|AAN70471.1|AE016688_10 motility protein, MotB family [Pseudomonas putida KT2440]
          Length = 346

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       Q+ I  S                         + +
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +          T  +++         +E    + E   L  L +E    ++  
Sbjct: 77  LGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      +SI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274


>gi|306813285|ref|ZP_07447478.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
 gi|305854048|gb|EFM54487.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
          Length = 307

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H+ K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G                   DRA SA +VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|293403376|ref|ZP_06647467.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
 gi|298378988|ref|ZP_06988869.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
 gi|291429229|gb|EFF02249.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
 gi|298280101|gb|EFI21605.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
          Length = 318

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 12  MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 72  ERESIIAALH---------------GQSIFNGGGLSPLNKIRPSHPPKPATVAVPEETEK 116

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K           +  N + +   K S T   E    +             E   +P   +
Sbjct: 117 K----------AHDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 167 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 203

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G                   DRA SA +VL 
Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 241

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282


>gi|260467043|ref|ZP_05813223.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259029152|gb|EEW30448.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 343

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 116/330 (35%), Gaps = 30/330 (9%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           + D   T+L+A   +M+++           + I    +     L +    +         
Sbjct: 19  FVDALSTLLLA---IMFLLTVFVLAQFLLGREISGK-DTALSRLNSQINELTQLLALERS 74

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           ++Q+K D   +   + ++ + +     Q         +      +       N      +
Sbjct: 75  TAQDKDDSLANLQASLSAAEAEKSRLEQLLAQGAGAGDAANQRAAALGGELDNQRQISQQ 134

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               +        ++ K+       L+  +        ++ DL ++++  L+  V +   
Sbjct: 135 ALSQVEILNQQIAALRKQIGALEDALNVSETRDRDSNTKIADLGRRLNVALAQRVQELNR 194

Query: 213 ---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---- 259
                    + +L +     I+      ++  +F   S +      V ++K+ + +    
Sbjct: 195 YRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQ 254

Query: 260 ----AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
                    V+ + GHTD  P       RDNW LS  R+ S  + L+++GV  +R+    
Sbjct: 255 KEIPPEINWVLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA- 313

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           GF   +    +D   +   NRRI++ + +R
Sbjct: 314 GFGEFQPLDPADTEEARNKNRRIELKLTER 343


>gi|148549982|ref|YP_001270084.1| flagellar motor protein MotB [Pseudomonas putida F1]
 gi|148514040|gb|ABQ80900.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 346

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           EN+Q II+K+        ++ G+WKI                                  
Sbjct: 2   ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   S    +++       Q+ I  S                         + +
Sbjct: 36  MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +          T  +++         +E    + E   L  L +E    ++  
Sbjct: 77  LGGSPEMAPDKTINPEVKTEPTQQSPTQLNKDQVETMAEQVERERLELLLQELQNKVEEN 136

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +LQ    +I                LFE T+ G+ I I+D  N PMFD  S+   P   
Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L  + + +      ISI GHTDA P+       NW LS +RA +A + L+  G  + +
Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++++ G+A   L    DP N  NRRIDI+V  ++
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274


>gi|326564485|gb|EGE14711.1| OmpA/MotB domain protein [Moraxella catarrhalis 46P47B1]
 gi|326568376|gb|EGE18456.1| OmpA/MotB domain protein [Moraxella catarrhalis BC7]
 gi|326572277|gb|EGE22272.1| OmpA/MotB domain protein [Moraxella catarrhalis BC8]
 gi|326574291|gb|EGE24238.1| OmpA/MotB domain protein [Moraxella catarrhalis O35E]
 gi|326574875|gb|EGE24805.1| OmpA/MotB domain protein [Moraxella catarrhalis 101P30B1]
          Length = 224

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 8/184 (4%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +  ++            K    A+            +      +       GV       
Sbjct: 45  VAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDTD 104

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281
              I++        F           +  L ++   +    E   +  GHTD++     A
Sbjct: 105 TGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDST---GQA 160

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             N  LS  RA S    L+  GV   RI  + G+   +   ++      + NRR+++++ 
Sbjct: 161 AYNQELSERRADSVRYYLINQGVDPYRIQTV-GYGIRQPIASNATEAGRAQNRRVELMIL 219

Query: 340 DRQG 343
             QG
Sbjct: 220 APQG 223


>gi|115373102|ref|ZP_01460404.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|310824354|ref|YP_003956712.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
 gi|115369858|gb|EAU68791.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|309397426|gb|ADO74885.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
          Length = 273

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 9/212 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            Q  E     L     +           +  N+E       L+K      + K+ L+  +
Sbjct: 64  EQDKEALATRLATSESRLTASAAERSALERKNEELKALNDELAKNTRRLAEAKEALEKRS 123

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  +    L  +     +     +  + + + D+    +F   S+    E    L KI 
Sbjct: 124 AEYENLAQSLKQEISDGKIQLSELQGRMTVQLKDK---ILFASGSTRVGKEGQEALAKIA 180

Query: 257 EVLAHSTEVI-SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + L      I  + GHTD  P         NW LSL RA +  + L  +GV    +   +
Sbjct: 181 DALKSVQGRIIRVEGHTDDVPTDKNGPFPSNWELSLARAMAVVRALQDAGVDPT-VLSAA 239

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           G+  ++   A+D   +   NRRI+I++  + G
Sbjct: 240 GYGQYQPIAANDSAENRSLNRRIEIVLAAKAG 271


>gi|315225528|ref|ZP_07867338.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
 gi|314944472|gb|EFS96511.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
          Length = 456

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 16/274 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +    + GI  +    +R      D            +LK             ++     
Sbjct: 183 DYFQHAAGITIKFGKKDRDKDGVADKDDLCPDEPGKPELKGCPDRDNDGVADKDDACPDE 242

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +   + + C +          D C         N   +     +              ++
Sbjct: 243 AGKPELKGCPDRDNDGIADKDDACPDEAGPAEFNGCPDTDGDGVPDNVDQCKDVAGPKEN 302

Query: 195 LAKKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPL 245
                  T    V D   + V                 +   + D   T +FD + +   
Sbjct: 303 NGCPWPDTDGDGVLDKDDQCVDVPGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIK 362

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P++  VL +I +VL        SI G+TD          N +LS DRAYS    L++ G+
Sbjct: 363 PQSATVLNQIVDVLNQYKNAKFSIEGYTD---ISGKRDKNQKLSEDRAYSVKAYLIEKGI 419

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            E R++   GF   +   ++        NRR++I
Sbjct: 420 DEGRLTA-KGFGPDKPIASNKTKKGRELNRRVEI 452


>gi|325981887|ref|YP_004294289.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325531406|gb|ADZ26127.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 264

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
                    ++ +  ++  +           +++++++ +AK I   L  LV +     V
Sbjct: 70  PQTSEFSPLQNGHSNQDSLIKLADNFSTQKARKQEKMKGMAKNILHALEPLVKNG---QV 126

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
                  GI + I       +F    +     +I+ LQ I  V+      I++ GHTD  
Sbjct: 127 RVTQNSLGITVEINAS---VLFSPGQAKLAENSILSLQAIANVIKGHEHEINVEGHTDNL 183

Query: 276 PFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
           P        NW LS  RA S  ++ ++ GV   R++ I G+  +R   +++       NR
Sbjct: 184 PINTENFPSNWELSSARASSVIRLFIEKGVEAHRLTAI-GYGENRPIESNETFEGRKRNR 242

Query: 333 RIDILVED 340
           R+ +++  
Sbjct: 243 RVTVMIMS 250



 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          I ++K   +    N   W + Y+DF+T+L AFF+VM+ +++ +D   + +        KN
Sbjct: 2  INRRKKINESPLENQERWLVSYSDFITLLFAFFVVMYAVSSVNDGKYRVLSSSLVTAFKN 61

Query: 76 LMTASKGIFDEQNPPE 91
            ++            
Sbjct: 62 SSSSISESPQTSEFSP 77


>gi|254517026|ref|ZP_05129084.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
 gi|219674531|gb|EED30899.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
          Length = 270

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 7/222 (3%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
             ++ L ++I             +    D      L                     ++ 
Sbjct: 43  GDFRVLSDSIVQAFGLPGVSFDPSRPNGDGTSSSRLGIPQAAVADEAPRVPLQSAANART 102

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A+      Q++    ++  + +                 + I I  +    +F   S
Sbjct: 103 PEAALGDIASEQEMTGVEAAVQTSIGDLIAPDRFAVTGNDKWLEIKIPARM---LFPSGS 159

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM 300
              L  +I +L+++ + L      + ++GHTD  P R      NW LS  RA +  +V  
Sbjct: 160 RSLLASSIPMLRRLADTLKALPNEVVVQGHTDNQPIRNGQFPSNWELSTARAAAIARVFE 219

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           + GV   ++S + GF  +R    +      + NRR+ +LV  
Sbjct: 220 EEGVDPVKLSAV-GFGPNRPIADNASEEGRAENRRVVVLVRS 260


>gi|315644424|ref|ZP_07897557.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
 gi|315280174|gb|EFU43467.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
          Length = 273

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 9/218 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +   +   S+         T   +  K L        + +K  +  +P  + ++  A   
Sbjct: 43  DARKFQEMSEAFSVALTGGTGVLDYSKTLPSEDPPNVNDHKASSPNVPATTPDQRRAELM 102

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++  +DL K      + +  + +   +  +   + ++I+I D     +F    ++  PE 
Sbjct: 103 RQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITIRDN---ALFPSGEAVVKPEA 159

Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVS 305
             + + I ++L    +  I + GHTD  P  N     NW LS DRA      +L  S + 
Sbjct: 160 RKLAKAISQMLHKFPDYEIIVSGHTDNVPIANSRYPSNWDLSSDRALQFMKILLTNSALD 219

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             R   I G+  +     +      + NRR+++ +  +
Sbjct: 220 PKRFMPI-GYGEYHPIADNKTEAGRAKNRRVEVSIIRK 256


>gi|94495402|ref|ZP_01301982.1| flagellar motor component [Sphingomonas sp. SKA58]
 gi|94424790|gb|EAT09811.1| flagellar motor component [Sphingomonas sp. SKA58]
          Length = 350

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 1/230 (0%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
                +K         +  L  +             + K            SI    +  
Sbjct: 58  TTEKQRKALADYFTPTLVELKMASAGSTGLMGGDSLTGKDNYPTTGGVGNLSITIPRDAT 117

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                  K +    +++ + + K + + ++      + K V F  TR G+ I +ID+ + 
Sbjct: 118 GTKDQGGKAMRAADRQKFESIKKDLEARMNRKGLSRLRKNVRFTETREGLRIDLIDEADF 177

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAY 293
            MF   +   +PE   ++ ++  VL      + +RGHTDA P+    A +NWRLS  RA 
Sbjct: 178 AMFAMGTDRLVPEARALVGEVASVLKTMPNDLIVRGHTDALPYASGKAMNNWRLSSARAE 237

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           S  Q L  SG+   R ++I G A     +  +  +  NRR+ I++   +G
Sbjct: 238 STRQALADSGIGNPRFARIEGVADREPFVKDNRYDPRNRRMSIILGWSRG 287



 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 61/147 (41%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
                N+   + +I+KK +      ++ G+WK+ YADF+T +MAFFL+MW++ AT +  +
Sbjct: 4   KKRGANEPEPRPVIVKKIIVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           KA+  YF P    L  AS G          + ++    +        ++      T  + 
Sbjct: 64  KALADYFTPTLVELKMASAGSTGLMGGDSLTGKDNYPTTGGVGNLSITIPRDATGTKDQG 123

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTR 149
                  +     + ++    + +   
Sbjct: 124 GKAMRAADRQKFESIKKDLEARMNRKG 150


>gi|91204077|emb|CAJ71730.1| similar to flagellar motor protein B [Candidatus Kuenenia
           stuttgartiensis]
          Length = 215

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 12/185 (6%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            N++ +  L  L +E         R +    ++ ++   L +     G + +     + I
Sbjct: 35  ENQQLSQSLASLQQENANLSATASRYESELNRLENSRRDLESKLAGTGAITKIKDGSVSI 94

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPF---RNIA 281
            + D     +FD   +    ++   L+KI  +L    S E++ I GHTD+ P    ++  
Sbjct: 95  VLPDS---ILFDPGQTKLREQSKATLKKIAGILKTDISNEMVRIEGHTDSDPIQKQKDKY 151

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             NW LS  RA S    L+   G+S  R+  ++GF   +    +      + NRR++ ++
Sbjct: 152 PSNWELSTARANSVLHYLVDECGISPTRVY-VAGFGQFQPISDNKTKAGKAQNRRVEFVI 210

Query: 339 EDRQG 343
               G
Sbjct: 211 ISGGG 215


>gi|332291582|ref|YP_004430191.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169668|gb|AEE18923.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 327

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 113/313 (36%), Gaps = 24/313 (7%)

Query: 49  LVMWIINATD----DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           L++  I+A          K +E  ++   K+  +    + D +   ++ ++    +S D 
Sbjct: 7   LIILAISALTSCVPAKKFKDLEASYSRLRKDNRSLEDNVKDLKAELDKRNEIYDKVSKDL 66

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             +   V+   G     K         +    S  S     +  ++ +   +L    +  
Sbjct: 67  ATSMTRVEELEGENASAKANLEQLQASYNALESNSSATIAENSQKNRQLLAELETKQNDL 126

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLA----------KKISSTLSGLVADNIVKG 214
                        L K +    +R  R+ +L           + +  ++S  + D   KG
Sbjct: 127 AEKTAALEAERTRLEKLQKDLAERSARVDELEGVIAAKDATMRVLKESISKALTDFEGKG 186

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTD 273
           +  E     + +S+    N  +FD  S          ++++G VLA + ++   I GHTD
Sbjct: 187 LTVEQRDGKVYVSL---ENKLLFDSGSWTVGANGTKAVKQLGSVLADNPDIAVLIEGHTD 243

Query: 274 ASPFRNIA--RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN-- 328
             P+        NW LS  RA +  ++L     +    ++   G   +     +D     
Sbjct: 244 NVPYGGSGNLAGNWDLSAKRATAIVEILRTNRDIDPKNLTAA-GRGEYAPVAENDTAENK 302

Query: 329 SANRRIDILVEDR 341
           + NRRI++++  +
Sbjct: 303 AKNRRIEVILTPK 315


>gi|163857259|ref|YP_001631557.1| OmpA-family protein [Bordetella petrii DSM 12804]
 gi|163260987|emb|CAP43289.1| OmpA-family protein [Bordetella petrii]
          Length = 334

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 88/239 (36%), Gaps = 8/239 (3%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            S+     +   +     L   +  +    +                 L  + D   +  
Sbjct: 92  GSIARAGAAPAGQAPAHALLAALLPMPELPEQAELPGLAAALPVPATALAPAGDSPAAPA 151

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                     +  +  +  + +   +  +    +++ L  D++  GV        I   I
Sbjct: 152 ANLRQTSDDAAGGEPPSAPKIEPEPEPTQPEPPSIAELGLDDLGDGVDVIVNEKSISFRI 211

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWR 286
               N  +F    ++  P  + ++ ++ +V+  S    +S+ GH+D  P +      NW 
Sbjct: 212 ---SNELLFPSGQAVLSPAGLGLISRMAKVINRSQGYPVSVEGHSDPVPIQTRQFPSNWE 268

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           LS  RA S  + L++ GV   R+  + G+A      ++D     +ANRR+++++E   G
Sbjct: 269 LSAGRATSVLRELVRDGVDPGRLRAV-GYADTHPIASNDTPQGRAANRRVELIMEITPG 326


>gi|119897401|ref|YP_932614.1| flagellar motor protein MotD [Azoarcus sp. BH72]
 gi|119669814|emb|CAL93727.1| flagellar motor protein MotB [Azoarcus sp. BH72]
          Length = 279

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +E G+ +        S             +E+    +  +R++++A++I   L+ L  D 
Sbjct: 63  NESGQQIVLPPVSVMSPAAPAPAASTRSPEEEAKRQQTAQRMRNMAEEIRRVLAPLTQDG 122

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               V       GI + I       +F    +      +  L+ + +VLA +   I+I G
Sbjct: 123 ---QVSISEGAFGIAVEINAS---VLFAPGEATLGAPAVSALRAVAQVLAGAEFPITIEG 176

Query: 271 HTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           HTD  P  N     NW LS  RA S  ++ ++SGV  +R++   G+A  R    +D    
Sbjct: 177 HTDNIPISNLRFPSNWELSAVRASSVVRLFIESGVRAERLTAA-GYADQRPVAGNDTDAG 235

Query: 328 NSANRRIDILVEDRQG 343
            + NRR+ I++E R G
Sbjct: 236 RARNRRVTIMIESRVG 251



 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 3/170 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  ++D   N   W + YADF+T+L AFF+VM+ +++ ++   + +        +++  
Sbjct: 3   RRRKLEDEHENHERWLVSYADFITLLFAFFVVMYSLSSINEGKYRVLSDSLVQAFRSINI 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              G   +Q      S            T++  +        ++     E     L+   
Sbjct: 63  NESG---QQIVLPPVSVMSPAAPAPAASTRSPEEEAKRQQTAQRMRNMAEEIRRVLAPLT 119

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           Q      S        +                       +  ++LA   
Sbjct: 120 QDGQVSISEGAFGIAVEINASVLFAPGEATLGAPAVSALRAVAQVLAGAE 169


>gi|333003303|gb|EGK22849.1| chemotaxis protein motB [Shigella flexneri K-218]
          Length = 265

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 3/202 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             ++T                    + +       + E++     + RL+ L   +   +
Sbjct: 24  ATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLI 83

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL   
Sbjct: 84  ESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+   ++ ++ G A    
Sbjct: 144 PNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMR 203

Query: 321 KIASDPMNSANRRIDILVEDRQ 342
                P ++ NRRI +LV ++Q
Sbjct: 204 LSDRGPDDAVNRRISLLVLNKQ 225


>gi|148258147|ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobium sp. BTAi1]
 gi|146410320|gb|ABQ38826.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. BTAi1]
          Length = 342

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 103/343 (30%), Gaps = 25/343 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTV------LMAFFLVMWIINATDDDTKKAIEQYFNP 71
           +    D   N        + D   T+      L+  FLV+    + +   K    +  N 
Sbjct: 5   RTRRGDSGLNYWPG----FVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
               L          +   +           +    ++ V                  N 
Sbjct: 61  KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLANAEAERDRVKGLYDGLASAGSNAAGRTNE 120

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   + +    ++ +     + +        ++    +       + +        R
Sbjct: 121 LNRALDSEKQVTARAMAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR 180

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L     +    L+   ++   +       R  I +       ++   FD   +  LPE  
Sbjct: 181 LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ 240

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM 300
             L  +   L        A  + V+ + GHTD  P  +   + NW LS  RA S  Q L+
Sbjct: 241 QELNSVATALVDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI 300

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             GV   R+    GFA  +     +  ++   NRRI++ + +R
Sbjct: 301 SLGVPAQRLVAA-GFAEFQPLDPGNTEDAFRRNRRIELKLTER 342


>gi|332702472|ref|ZP_08422560.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332552621|gb|EGJ49665.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 239

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 13/186 (6%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D      +           +   A+ R+   Q   + I S L         + V F+   
Sbjct: 53  DEIAGSMQTALKPSEARKSDLREAVTRELDRQATLEHIISDLQQRFRGEAAEHVQFQLRP 112

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNI 280
             + I++        FD  S+   P+ + +L+KIG VL      +++ GHTD  P     
Sbjct: 113 GAVAINLH---GPAFFDSGSAELTPDAVRMLRKIGVVLVGVPYHLTVEGHTDNVPIQTGA 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANR 332
              NW LS  RA    + L+  GV  D +  I G A  R  + ++  +          NR
Sbjct: 170 FDSNWELSALRATRVARFLISQGVRPDNMK-IVGLADTRPLLPNNDASGAALPENQTRNR 228

Query: 333 RIDILV 338
           R+ ILV
Sbjct: 229 RVVILV 234



 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
          ++  +D        W +  AD MT+L+ FF+++  I+  D      I        K
Sbjct: 11 RRRRMDQE--GGEDWHLSLADMMTLLLCFFVLLASISQVDYTLFDEIAGSMQTALK 64


>gi|167629589|ref|YP_001680088.1| flagellar motor protein motb, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167592329|gb|ABZ84077.1| flagellar motor protein motb, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 298

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 11/210 (5%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + SQ       +L +  E             +    E     P     + ++K  + LQ+
Sbjct: 36  AVSQVDTKKFEALKKAMESVFKGGSGIMANPTPLDTEGASDAPPDMSVMESLKETRDLQE 95

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +  ++   +       + K V     R G+ IS  D     +FD   +    E +  L  
Sbjct: 96  IKNRVDRYIEE---KGLEKQVETNLVREGLQISFRDA---ALFDSGKADLKREALPALDL 149

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKI 312
           I + L + +  + I GHTD  P        NW LS  RA +  +  L     +  + + +
Sbjct: 150 IADTLHNLSNEVRIAGHTDNLPISTAEFPSNWDLSAKRALNVMKYILNDKRNNPVKFTAV 209

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVED 340
            G+  +  K  +D     + NRR+++++  
Sbjct: 210 -GYGEYHPKATNDTPEGRAQNRRVEVMIIR 238



 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 37/95 (38%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I YAD +T+L+A F+VM+ ++  D    +A+++      K     
Sbjct: 3   KKKQHHEEHIDETWLIPYADMLTLLLALFIVMFAVSQVDTKKFEALKKAMESVFKGGSGI 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                         +   + +      T++  ++K
Sbjct: 63  MANPTPLDTEGASDAPPDMSVMESLKETRDLQEIK 97


>gi|116620394|ref|YP_822550.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223556|gb|ABJ82265.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 545

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 11/223 (4%)

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           +Q+++ Q   +     +  +Q+E  K          +        E++            
Sbjct: 314 DQQRRAQAEADQRASETARRQAEQAKLEADNARASAEKAAADAARERAAADAARLAAEQQ 373

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +  +    R K+    A+   + L   + + +   +    T  G++I+I D     +FD
Sbjct: 374 QQAAMAEADRAKQGMQKAEAEKAELRERLRNQLNMILETRETARGLIINISD----VLFD 429

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            +     P     L K+  +L       I + GHTD+         N +LS  RA S   
Sbjct: 430 FNKYTLKPGAREKLAKVSGILLAYPGLNIKVEGHTDSI---GSDEYNQKLSESRASSVRD 486

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            L    V  D +S + G        ++D       NRR++++V
Sbjct: 487 YLTSQNVPADSVSAV-GLGKSDPVASNDTAAGRQRNRRVELVV 528


>gi|2853603|gb|AAC08067.1| MotB [Pseudomonas putida]
          Length = 285

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 10/182 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +   S+   E         E  LA      L+ ++  +      L+  N    +      
Sbjct: 71  EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSN---QMTVRGNE 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             I I +    ++ +F    ++P  +   ++ K+  +L      + + G TD  P R   
Sbjct: 128 LWIEIEL---SSSLLFGSGDAMPSDKAFAIIDKVASILKPFANPVHVEGFTDNLPIRTAQ 184

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              NW LS  RA S  ++L   GV+  R++ + G+  ++    +D     + NRR+ +++
Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVI 243

Query: 339 ED 340
             
Sbjct: 244 SR 245



 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           + K I   DEQ    R ++  +  S        + ++    T          +
Sbjct: 62  SMKPIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114


>gi|296114560|ref|ZP_06833213.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978916|gb|EFG85641.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 321

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 109/327 (33%), Gaps = 38/327 (11%)

Query: 32  SWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           +W   Y D   T+LM        F++     +   + ++ +         +L        
Sbjct: 16  AWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVALNKRQQVLDQLQREVAHLSQMLSLEQ 74

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
              +  E+S          +  T  S+  ++                     +++ +   
Sbjct: 75  SHNHSLEQSVATLQKEHAADEATTTSLTAQVS-----------------QQAAERDDARH 117

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            +   +++  +   +   +  ++   +N       K   L M+    L    +++    S
Sbjct: 118 QADELNNQLAQLSAQLAAVSTALEISQNEVHDRDRKLDNLGMQLNIALAQKVEQLQRYRS 177

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-- 262
                   + VL +T    ++      ++  +F   S+   PE I  ++ +G  L     
Sbjct: 178 EFFGRL--RDVLKDTKGIQVVGDRFVFQSEVLFPVGSADLSPEGIQEIKVLGRTLKQVAQ 235

Query: 263 ------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
                   ++ + GH D  P       NW LS  RA +  ++L+  G+S  R    +GFA
Sbjct: 236 QIPPSVPWILRVDGHADRLPIHTAFPSNWELSSARAITVVKMLIADGISP-RHLAATGFA 294

Query: 317 HHRLKIASDPMN--SANRRIDILVEDR 341
             +           + NRRI+  + DR
Sbjct: 295 DFQPLDNGTTAEAFARNRRIEFRLTDR 321


>gi|293410200|ref|ZP_06653776.1| motB [Escherichia coli B354]
 gi|291470668|gb|EFF13152.1| motB [Escherichia coli B354]
          Length = 241

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 3/200 (1%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS- 204
           ++T                    + +       + E++     + RL+ L   +   +  
Sbjct: 2   AVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIES 61

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                 +   +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL     
Sbjct: 62  DPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPN 121

Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            IS+ GHTD  P+ +      NW LS DRA ++ + LM  G+   ++ ++ G A      
Sbjct: 122 RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLS 181

Query: 323 ASDPMNSANRRIDILVEDRQ 342
              P ++ NRRI +LV ++Q
Sbjct: 182 DRGPDDAVNRRISLLVLNKQ 201


>gi|187932715|ref|YP_001887659.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
 gi|187720868|gb|ACD22089.1| putative chemotaxis MotB protein [Clostridium botulinum B str.
           Eklund 17B]
          Length = 244

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 11/164 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              M   ++L     K+   +      N+   V  +    G++IS  D      F+   +
Sbjct: 78  DAVMVESEKLDTAKSKVDELIKEY---NLEGRVSTQIQERGLIISFNDN---VFFNSGDA 131

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
               E    L  I ++L      I + G+TD           NW+LS  RA +  ++L+K
Sbjct: 132 TIKSEYKQKLISISKILNDIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            G ++ D++S I G+  +R   ++D       NRR+DI++ + +
Sbjct: 192 EGNINSDKLSAI-GYGEYRPVKSNDTEEGRAANRRVDIVILNNE 234



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   N   W + Y+D +T+LM  F+V++  +  D    + I   F           
Sbjct: 2   KKKRENKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYRQISDSFKQAFSIGDAPG 61

Query: 81  KGIFDEQNPPERSSQNKIDLSIDE 104
                 +   E S  N   +   E
Sbjct: 62  AIKEVGEETNENSIVNDAVMVESE 85


>gi|115372712|ref|ZP_01460018.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
 gi|115370193|gb|EAU69122.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
          Length = 334

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 10/255 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
            ++  +L  D     ++VD        +  YQ  +  +   ++       ++        
Sbjct: 52  DKSAFELDSDGDGVPDTVDKCPTEKEDRDGYQDDDGCLDPDNDGDGISDGEDRCPNKPGT 111

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--KKRLQDLAKKISSTLSGLVADNI 211
            +      DL+   +   +       K               ++   +            
Sbjct: 112 VEHRGCPEDLDTDGDGIPDVLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPEN 171

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIR 269
                       +    I  +   +F+   +    ++  +L ++  VL  +     + I 
Sbjct: 172 NGCPYDSPPFVLVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIE 231

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD          N  LS  RA +    L   G+   R+S   GF   +    +D    
Sbjct: 232 GHTDNV---GSRNYNVDLSQRRAKAVLDYLAGKGIDRKRLSS-KGFGFDQPIATNDTPLG 287

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++  +   +
Sbjct: 288 RAKNRRVEFRLIKSE 302


>gi|115378003|ref|ZP_01465184.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|115364980|gb|EAU64034.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
          Length = 636

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 73/257 (28%), Gaps = 23/257 (8%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           +      +D              +             ++    +   ++ + C ++    
Sbjct: 396 DSDGDGILDPDDKCPSVPGVARFQGCPDTDGDGLVDPDDKCPSVPGVERFQGCPDTDGDG 455

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            E   D C S      +                     K +L D      +         
Sbjct: 456 IEDASDKCPSVPGIHELKGCPPKDT------------DKDQLPDHRDNCPNEPGPAANQG 503

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISI 268
                          I I D+     FD   +  LP +  +L ++  ++    E   I I
Sbjct: 504 CPVQQPQLVEIQRDRIEIKDK---VYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWI 560

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326
            GHTD          N  LS  RA      L+  GV   R+    G+       ++D   
Sbjct: 561 EGHTDER---GSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVP-KGYGRQYPVASNDTVE 616

Query: 327 MNSANRRIDILVEDRQG 343
             +ANRR++ L   R+G
Sbjct: 617 GRAANRRVEFLTTPREG 633


>gi|326386301|ref|ZP_08207925.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
 gi|326209526|gb|EGD60319.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
          Length = 229

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 8/143 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   +  L       GV  ++   G  I +++  +   FD  S++  P     L K+ + 
Sbjct: 78  MDKQIKELKEKTAGSGVDVKSVDDGQAI-LVNLPSGVTFDTDSTVIKPGFRDTLDKVADS 136

Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       I + GHTD++        N  LS +RA      L   GVS  RI   +GF  
Sbjct: 137 LNRYPNSLIDVYGHTDST---GSDAYNQTLSENRARVVADYLSSKGVSSARIRS-TGFGK 192

Query: 318 HRLKIASDP--MNSANRRIDILV 338
            +   ++D     +ANRR++I +
Sbjct: 193 TQPVASNDTPEGRAANRRVEIKI 215


>gi|153004433|ref|YP_001378758.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028006|gb|ABS25774.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 498

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSL 289
           R    F+  S+   PE+  +L ++  +L    E+  +   GHTD       A  N  LS 
Sbjct: 390 RGKVQFETGSARLKPESQRLLDQVASILRAHPEIRRVRVEGHTDDV---GPALTNKELSE 446

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            RA S    L++ G++  R+  I G+   R    +      + NRR++ ++  
Sbjct: 447 RRADSVRDALVRRGIAPSRL-SIRGYGESRPIAPNKTKAGRAKNRRVEFVITG 498


>gi|153940806|ref|YP_001391525.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
 gi|152936702|gb|ABS42200.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
 gi|295319551|gb|ADF99928.1| chemotaxis MotB protein [Clostridium botulinum F str. 230613]
          Length = 254

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  L++  +   +     +S     ++    +++++  K+ 
Sbjct: 40  DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGISIVPSDSVTEDIKMKEIKSKLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     +     V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIEK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPMN--SANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNATEAGKAKNRRVEISIVRK 237



 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN         
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +  +      +  I +   + +T++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVLQEGGSGGASVGKAGISIVPSDSVTEDIKMKEIKSKLEKEIEKNGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|146338211|ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobium sp. ORS278]
 gi|146191017|emb|CAL75022.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. ORS278]
          Length = 342

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 113/350 (32%), Gaps = 39/350 (11%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTV------LMAFFLVMWIINATDDDTKKAIEQYFNP 71
           +    D   N        + D   T+      L+  FLV+    + +   K    +  N 
Sbjct: 5   RSRRGDSGLNYWPG----FVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                      + +  +  +    +  D         ++ + +               + 
Sbjct: 61  KIAQ-------LNEMLSLEKLGKLSLDDQVAQLRAGLSNAEAERDRIKGLYDGLANAGSN 113

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                ++ +   ++     +     +        ++ ++       L   +    + + R
Sbjct: 114 ATGRANELNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNR 173

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSS 242
           + DL  +++  L+  V +       F      IL +  D R         +   FD   +
Sbjct: 174 IADLGSRLNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQA 233

Query: 243 IPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
             LPE    L  +   L        A  + V+ + GHTD  P  +   + NW LS  RA 
Sbjct: 234 TLLPEGQQELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAI 293

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           S  Q L+  GV   R+    GFA  +    ++   +   NRRI++ + +R
Sbjct: 294 SVVQYLISLGVPAQRLVAA-GFAEFQPLDTANTDEAFRRNRRIELKLTER 342


>gi|238795648|ref|ZP_04639162.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
           43969]
 gi|238720374|gb|EEQ12176.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
           43969]
          Length = 385

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 3/165 (1%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +   + + + RL  L +K+   +        +   +L      G+ I IID +N PMF  
Sbjct: 69  DSEESRREEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKM 128

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297
            S+   P    +L+ I  +L      IS+ GHTD  P+ N      NW LS DRA ++ +
Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRR 188

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 233



 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I  YF    K  +T+        +P      +    
Sbjct: 1   MTAMMAFFLVMWLLSVSSPQELTQIADYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGS 117
             +     +S + +   
Sbjct: 61  VGEVRKHIDSEESRREE 77


>gi|121533592|ref|ZP_01665419.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307583|gb|EAX48498.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
          Length = 257

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 11/160 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +K L+   + IS     +      +GV F  +  G+ I  +D     +FD   +   
Sbjct: 88  EGTEKDLETFREIISQIQQRVKD---PQGVGFTVSERGLTIRFLDS---ILFDLGRAELR 141

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSG 303
           P+ + +L  + + L  +   I + GH D  P        NW LS  R+ +  +  + K G
Sbjct: 142 PDALPLLDAVADALKQTDNYIRVEGHADNLPINTAQFPSNWELSAARSIAVTRYFIDKHG 201

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +   R+S + G+  +R    +      + NRR+DI++   
Sbjct: 202 LEPRRLSSL-GYGEYRPLYPNTSEANRAKNRRVDIVILRS 240



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
                +  W + YAD +T+LM FF+VM+ +++ D     A++       +     +  IF
Sbjct: 14  HDATGMMRWLLTYADLITLLMVFFVVMYAMSSADQKKFNALKASLAAALRTEGAGTNLIF 73

Query: 85  DEQN--PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +     P  +    +      E   +    ++    + + 
Sbjct: 74  EYSGNRPFNQVVNPEGTEKDLETFREIISQIQQRVKDPQG 113


>gi|293607844|ref|ZP_06690158.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553]
 gi|292813756|gb|EFF72923.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553]
          Length = 340

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              S + ++       +     +   +                 + + RL++L K++ + 
Sbjct: 83  GGPSSSAETSAVPGGGRDPLRSEGDVRRGQGNRVESQPMGDAERREQHRLENLKKRLENV 142

Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +    V  +    +L + T  G+ I IID +N PMF    +   P    +L+++G VL  
Sbjct: 143 IETSPVLKSFRPQMLIDLTTEGLRIQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNE 202

Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +SI GHTDAS +     A  NW LS DRA ++ Q L+  G++E ++ +I G +   
Sbjct: 203 LPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESKVMRIQGLSSSM 262

Query: 320 LKIASDPMNSANRRIDILVED 340
             +  DP  + NRRI ++V +
Sbjct: 263 SLVKDDPYAAVNRRISLVVLN 283


>gi|251777807|ref|ZP_04820727.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243082122|gb|EES48012.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 244

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 11/164 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              M   ++L     K+   +      N+   V  +    G++IS  D      F+   +
Sbjct: 78  DAVMGESEKLDTAKSKVDELIKEY---NLEGSVSTQIQERGLIISFNDN---VFFNSGDA 131

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
               E    L  I ++L +    I + G+TD           NW+LS  RA +  ++L+K
Sbjct: 132 TIKNEYKQKLISISKILNNIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            G +S D++S I G+  +R   ++D     +ANRR+DI++ + +
Sbjct: 192 EGNISSDKLSAI-GYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234



 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               ++  N   W + Y+D +T+LM  F+V++  +  D    K I   F       +  +
Sbjct: 2   RKKRESKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFS--IGDA 59

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            G  +E       +    D  + E    ++   K+  
Sbjct: 60  PGAINETGEETNENSIVNDAVMGESEKLDTAKSKVDE 96


>gi|294635726|ref|ZP_06714192.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
 gi|291090938|gb|EFE23499.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
          Length = 332

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
               R S+    +    D     + E   F      E+ +   R KRL++  +K+   ++
Sbjct: 72  QGGQRSSDSFSPIPGGGDDVTQKSGEVQRFAADPDPEQRVEQMRLKRLRERLEKV--IIN 129

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                 +   ++      G+ I IID +N PMF   S+   P    +L+ I  +L     
Sbjct: 130 DPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSARVEPYMRDILRAIAPILNELPN 189

Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH---R 319
            IS+ GHTD  P+ N      NW LS DRA ++ + L+  G++ ++I ++ G A     R
Sbjct: 190 KISLSGHTDDLPYANGERGYSNWELSADRANASRRELVIGGLAGNKILRVVGMADTMNLR 249

Query: 320 LKIASDPMNSANRRIDILVEDR 341
               +    + NRRI ILV  +
Sbjct: 250 HLAGN---AAVNRRISILVLTK 268



 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 70/178 (39%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
                I++KKK +     ++ G+WKI YADFMT +MAFFLVMW++          I +YF
Sbjct: 4   GKHPVILVKKKRSGHGQASHGGAWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
               K  +   +   D  +P      +    S +        D +      + +  R   
Sbjct: 64  RTPLKVALQGGQRSSDSFSPIPGGGDDVTQKSGEVQRFAADPDPEQRVEQMRLKRLRERL 123

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
               +++ +      + +    ++G  +       + + +  +  + P  ++ + A+ 
Sbjct: 124 EKVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSARVEPYMRDILRAIA 181


>gi|146337865|ref|YP_001202913.1| hypothetical protein BRADO0750 [Bradyrhizobium sp. ORS278]
 gi|146190671|emb|CAL74675.1| hypothetical protein; putative Outer membrane protein containing
           OmpA/MotB domain [Bradyrhizobium sp. ORS278]
          Length = 429

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 78/270 (28%), Gaps = 12/270 (4%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            + +          PP    +   D     ++       + G                  
Sbjct: 159 VIESGEAAPALTLAPPAAKPEKVADKDDLPYLKPYPGSSRKGEGRGNGPLDVTRPGSGDE 218

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                      S    +   K    +               P   KE   A         
Sbjct: 219 PALVGQGVVVRSYQGPTTLSKLQFVAEYRAALSKAGWQVTYPATDKEAADAAVVIAHYTR 278

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIV 250
             + I + L+     N+   V  +     +   +    + P+    FD + +   PE+  
Sbjct: 279 DGRDIWARLTYEFGANLSVSV-VDLGAEDLAGKLDKDCHLPLYGVLFDFNKASLKPESEP 337

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L K+  ++    +    I GHTD          N RLS  RA S    L + GV+  R+
Sbjct: 338 LLTKVAALVTARPDLNAEIEGHTDNV---GGDDYNMRLSDARAASVRTWLTQHGVAAARL 394

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +   G+   R    +      + NRR++I+
Sbjct: 395 TS-HGYGKTRPVADNGTDQGRALNRRVEIV 423


>gi|168179911|ref|ZP_02614575.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
 gi|182669337|gb|EDT81313.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
          Length = 254

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  L++  +   +     +S     ++    +++++  K+ 
Sbjct: 40  DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPSDSVIEDIKMKEIKSKLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     +     V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 5/125 (4%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN---- 75
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN   K     
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNV 61

Query: 76  -LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                S G    +        + +   I     K+ ++ +I       + +   +     
Sbjct: 62  LQEGGSGGASVGKAGVSIVPSDSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDADGLE 121

Query: 135 SNSQQ 139
            + Q 
Sbjct: 122 IDIQD 126


>gi|322806477|emb|CBZ04046.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
           065]
          Length = 254

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  L++  +  ++     +S     ++    +++++  K+ 
Sbjct: 40  DTAKLQKASQEFNVIFKAGSNVLQEGGSGGDSVGKAGVSIVPSDSVIEDIKMKEIKSKLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     +     V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN         
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +  +  +   +  + +   + + ++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVLQEGGSGGDSVGKAGVSIVPSDSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|167574625|ref|ZP_02367499.1| Chemotaxis lafU protein [Burkholderia oklahomensis C6786]
          Length = 303

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 4/220 (1%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           L        + ++    + +     E G  + +    +  +   +        +      
Sbjct: 47  LWVMNVTPEDERRRVAAEIAGKPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKE 106

Query: 187 KRK--KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +      L+   K  +   +   A  +   V       G+ ++I D     MF + S + 
Sbjct: 107 RDDTIDTLEARRKLAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVL 166

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKS 302
             +   +L+ +  VL+  T  + I GHTDA+ +       +NW LS  RA  A Q L+  
Sbjct: 167 DLQFDALLKALAPVLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDG 226

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           G+ E ++ ++SG       +  DP +  NRR+++L+   Q
Sbjct: 227 GLGEPQLFQVSGMGDSIPAVPDDPRHDVNRRVELLLLTSQ 266


>gi|330991015|ref|ZP_08314969.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
 gi|329761836|gb|EGG78326.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
          Length = 320

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 101/329 (30%), Gaps = 42/329 (12%)

Query: 32  SWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           +W   Y D   T+LM        F++     +   + ++            L        
Sbjct: 15  AWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVALNKRQQALNQLEHEVARL-------- 65

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
                          +   EH    ++  ++ S ++                +QQ+    
Sbjct: 66  -------------GQMLSLEHSHTTALQNEVASLHKAHDADVATATSLTAQLNQQTSERD 112

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
           ++  R +   + + +      +++         +            +L     K    L 
Sbjct: 113 SAQARTTALDEQVAQLNAQLAALSTVLEATEDTVHDRDRQISNLGMQLNVALAKKVEQLQ 172

Query: 205 GLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-- 260
              ++   +         G+ I       ++  +F    +   PE +  ++ + + L   
Sbjct: 173 QYRSEFFGRLRSVMQDHKGVQIVGDRFVFQSEVLFPPGGADLSPEGVQEIRVLAKTLRQV 232

Query: 261 ------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
                     ++ + GH D  P  +    NW LS  RA +  ++L+  G+    +   +G
Sbjct: 233 AQQIPADVPWILRVDGHADRQPIHSAFPSNWELSSARAITVVKLLIAEGIDPHHL-AATG 291

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           F+ ++           + NRRI+  + DR
Sbjct: 292 FSDYQPLDKGTTPEAFARNRRIEFRLTDR 320


>gi|319778561|ref|YP_004129474.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
 gi|317108585|gb|ADU91331.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
          Length = 959

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 85/292 (29%), Gaps = 31/292 (10%)

Query: 54  INATDDDTKKAIEQYFNPFGK---NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           ++A D     A             ++         + +  +   +   D    +      
Sbjct: 571 VSAEDKTKLLAAFDSIKDTSTIQDDMDVKDNQANMKLDSLDAFIKVVGDFPNVKGSFDGF 630

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                G     ++   L   +     SQ      +      + G+   K  D        
Sbjct: 631 TLDLTGHVISDERKTELVTKLQEALGSQFKIDADDVDVETPDVGETENKPVDDTNFPTPA 690

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E         E+        +  +LA  +   +S +  +N+   ++              
Sbjct: 691 EQPADQTAPAEQATTSSETAQTDELANVLD--ISEMSKENLDLHIV-------------- 734

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 FD +SS   P+    L    + L  S     I G+TD          N +LS +
Sbjct: 735 ------FDSASSDIQPKYNDRLDAFAKYLIESNRTGEISGYTDNQ---GDDESNKKLSAE 785

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RA S    L+  GV E  I  + G+        ++       NRRI+  V+D
Sbjct: 786 RANSVRNYLVSKGVPETNIVAV-GYGEANPIADNNTPEGRLANRRIEFNVKD 836


>gi|149375611|ref|ZP_01893380.1| Flagellar motor protein [Marinobacter algicola DG893]
 gi|149360013|gb|EDM48468.1| Flagellar motor protein [Marinobacter algicola DG893]
          Length = 277

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 8/200 (4%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                     L +S  +      E     P    E+  A    K    +    S  +  L
Sbjct: 66  GDAVGGSPLTLIESDTVSLPEPMETAADEPEFIDERAEADAPTKIPAGVIDLASRMIQEL 125

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
             +   + +      + ++I   ++     F    +   P  + +++++ EVL+  T  +
Sbjct: 126 EPEVASEALSVNYDESRVVIRFSEEAT---FRSGEAAIKPGMVPIIERVVEVLSGCTGDV 182

Query: 267 SIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324
            + G+TD  P      R NW LS  RA S    L+    V  +R+    G A     + +
Sbjct: 183 LVAGYTDDRPIASGRYRSNWDLSAARAVSVVHELVMNRQVPAERVVAA-GRAETNPLVPN 241

Query: 325 DP--MNSANRRIDILVEDRQ 342
           D     + NRR++I + + Q
Sbjct: 242 DSPENRAKNRRVEIAIRNPQ 261



 Score = 44.6 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/151 (9%), Positives = 43/151 (28%), Gaps = 5/151 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           ++++ V          +W + +AD  T+L+ FF+++      D +  +A+         +
Sbjct: 2   VVRQPVKKKKHGRGSPAWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMAVAFGS 61

Query: 76  LM-----TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                       +   ++      +     + +        +    +             
Sbjct: 62  NQVLGDAVGGSPLTLIESDTVSLPEPMETAADEPEFIDERAEADAPTKIPAGVIDLASRM 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
           I  L     SE    +        +   ++T
Sbjct: 122 IQELEPEVASEALSVNYDESRVVIRFSEEAT 152


>gi|116878566|ref|YP_357384.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
 gi|114843202|gb|ABA89214.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
          Length = 299

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 12/213 (5%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            +++  +      +   +     T+L + I++ +       S+ +   + R+ R+  L  
Sbjct: 86  AKADIARLEKILANRSAETGQAMTELRQDIDRLQEEKRHLNSQLEQEHLARQARIAQLKT 145

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                +  L ++     V     +  + ++++++    +FD   +   P  + +L++IG 
Sbjct: 146 TYDDLVDKLESEIKRGEVTISDLQGRLTVNMVEK---ILFDSGKADIKPAGLNILKRIGT 202

Query: 258 VLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           +L ++ +  I + GHTD  P         R NW LS  RA S    L    G+S +R+  
Sbjct: 203 ILKNTADKSIRVEGHTDNVPISPRLKDIYRSNWELSTARAGSVVHFLQDRLGISGERL-S 261

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           + GF  +    ++      + NRRI I++  +Q
Sbjct: 262 VCGFGPYMPIASNATAQGRAQNRRIQIVLVPQQ 294


>gi|51894108|ref|YP_076799.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM
           14863]
 gi|51857797|dbj|BAD41955.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM
           14863]
          Length = 300

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 90/311 (28%), Gaps = 38/311 (12%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + YADFMT++   F+VM+     D    +++ +                   Q    
Sbjct: 25  RWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLARSL----------------GQALGT 68

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                    +  +  T   +       +         + I               +    
Sbjct: 69  VGPDIAPLPTRGQEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAPVPPVEPPP 128

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            + +   + TD+   +         P S      +     + ++A+   +          
Sbjct: 129 AEAEPADEPTDVWTVLEP--EPAPVPASPRVTAPVAEPDEMAEVAEVFRAM-----PGVK 181

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              +       GI++S+     + +F+       PE    L +I + LA     I + G 
Sbjct: 182 TGLLSVALEERGIVLSV---AGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGT 238

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330
            DAS     A   + L+  RA +  +   +  G+         G+   +           
Sbjct: 239 ADASHAAGSAEA-FELAALRAGAVVRYFTETYGLPGGNFVYF-GYGDGQSASD------- 289

Query: 331 NRRIDILVEDR 341
             R+ I+V  +
Sbjct: 290 --RVTIVVARK 298


>gi|313682225|ref|YP_004059963.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
 gi|313155085|gb|ADR33763.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
          Length = 283

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 8/248 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           S    + ++ E     S       T  +++ Q   N       +++    K        +
Sbjct: 21  SSKTHEATLQELENTRSALASAQRTVNEQKLQIKRNQEEIERYNKEINELKTKKQELEAE 80

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            + L  S +  +    E+   L    K+     + +   Q   +  +  +  L       
Sbjct: 81  YQKLQASLNTTRMELAEKQSMLNLTEKQLKTLRQIEAETQKRNEIYARFVGKLQKMIDAG 140

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            +        ++I++ +     +F    +         L++I +VL    E    I GHT
Sbjct: 141 KLTVSIENGRLVINLPEN---VLFPTGRTTLNAGGSETLKEIADVLKELPERRFQIEGHT 197

Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D  P  N     NW LS  RA     +++  GV    IS   G+   + +  ++      
Sbjct: 198 DTVPIHNDRFASNWELSSGRALRVVHLMIDEGVQPANISAA-GYGEFQPRADNNTTEGKA 256

Query: 331 -NRRIDIL 337
            NRRI+I+
Sbjct: 257 LNRRIEIV 264


>gi|300113742|ref|YP_003760317.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299539679|gb|ADJ27996.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
          Length = 286

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 10/250 (4%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--EHCKNSLTRDSEK 153
             I  +  E    +    +  S   +    RL+     L  +Q +               
Sbjct: 30  PPIKPAKLERAEADVEQAQADSRVTQYAPVRLDEAKEALQRAQVAWEADKNVEEVEHLAY 89

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                 +     + +K     +  L +E+   +     L+    K  + ++ + AD + K
Sbjct: 90  LAQQRAAIAEMAAADKAAQAEIKNLGQERQQMLMDMHELEARQAKEQAKMAEVRADKLEK 149

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            +            ++      +F+  S+      +  L ++   L    +   +  GHT
Sbjct: 150 RLAALNAEKTERGYVL-TLGDILFEVDSAELTSGGMQNLFRLVTFLKEYPDRQVVIEGHT 208

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D++        N  LS  RA + Y+ L+ +G+S  RI    G+        ++       
Sbjct: 209 DST---GSGVYNMELSQRRADAVYEFLVNNGISPARI-AAHGYGKAYPVAPNNTAAGRQK 264

Query: 331 NRRIDILVED 340
           NRR++I++ D
Sbjct: 265 NRRVEIVILD 274


>gi|238785460|ref|ZP_04629444.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
           43970]
 gi|238713615|gb|EEQ05643.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
           43970]
          Length = 380

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +   + K + RL  L +K+   +        +   +L      G+ I IID +N PMF  
Sbjct: 69  DSEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKM 128

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297
            S+   P    +L+ I  +L      IS+ GHTD  P+ N      NW LS DRA ++ +
Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRR 188

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 233



 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I  YF    K  +T+        +P      +    
Sbjct: 1   MTAMMAFFLVMWLLSVSSPQQLTQIADYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGS 117
             +     +S + +   
Sbjct: 61  VGEVRKHIDSEESRKEE 77


>gi|218662295|ref|ZP_03518225.1| hypothetical protein RetlI_23953 [Rhizobium etli IE4771]
          Length = 223

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 74/219 (33%), Gaps = 15/219 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            +Q +  + +L++     + +        ++              +        RL    
Sbjct: 6   DEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVAL 65

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                 L+   +D   +     + R  I I       ++  +F    +   PE    + K
Sbjct: 66  AARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAK 125

Query: 255 IGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGV 304
           +   L             V+ + GHTD  P       RDNW LS  RA S  + L+  GV
Sbjct: 126 LATALLDLAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGV 185

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             DR+    GF   +     D   +   NRRI++ + ++
Sbjct: 186 PADRLVAA-GFGEFQPIAPGDTPEARATNRRIELKLTEK 223


>gi|330721195|gb|EGG99305.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC2047]
          Length = 307

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 10/153 (6%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L +L+ ++ S    LV D     +    + T I IS+    +  +F+  S+    +++ V
Sbjct: 110 LSELSDQVESAFGDLVRDG---EITISGSETWIEISL---SSGLLFNSGSANLNRQSLPV 163

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L++I  +L+     + + G TD  P    I   NW LS  R+ +  ++L +SGV  +R++
Sbjct: 164 LEEISSILSGYENPVHVEGFTDDIPIQSGIFPSNWELSAARSAAVVRLLSESGVEPNRLA 223

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + G+   +   +++       NRR+ ++V   
Sbjct: 224 AV-GYGQFQPIASNESAEGRGKNRRVALIVSRD 255



 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 3/139 (2%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++         N   W I Y+DFMT+L AFF+VM+ I++ ++   K + +      +   
Sbjct: 3   RRDKHTSHDQENHERWLISYSDFMTLLFAFFVVMYSISSVNEGKYKVLSETLIDAFQVED 62

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
              +   +     + +  + ID     +      D+K   T        L + +     S
Sbjct: 63  KEEESSSELIELSDHNKNSMIDFDGRAN---KEGDVKAEVTGDGDYIGTLLSELSDQVES 119

Query: 138 QQSEHCKNSLTRDSEKGKD 156
              +  ++     S     
Sbjct: 120 AFGDLVRDGEITISGSETW 138


>gi|188587883|ref|YP_001922642.1| chemotaxis MotB protein [Clostridium botulinum E3 str. Alaska E43]
 gi|188498164|gb|ACD51300.1| putative chemotaxis MotB protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 244

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 11/164 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              M   ++L     K+   +      N+   V  +    G++IS  D      F+   +
Sbjct: 78  DAVMGESEKLDTAKSKVDELIKEY---NLEGSVSTQIQERGLIISFNDN---VFFNSGDA 131

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
               E    L  I ++L +    I + G+TD           NW+LS  RA +  ++L+K
Sbjct: 132 TIKNEYKQKLISISKILNNIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191

Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            G +S D++S I G+  +R   ++D     +ANRR+DI++ + +
Sbjct: 192 EGNISSDKLSAI-GYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234



 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
              ++  N   W + Y+D +T+LM  F+V++  +  D    K I   F     
Sbjct: 2  RKKRESKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFS 55


>gi|326791532|ref|YP_004309353.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
 gi|326542296|gb|ADZ84155.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
          Length = 248

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 14/184 (7%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D     N    + +         A +  +      + I + +     D+    +  + + 
Sbjct: 67  DNNVLENGMSQFPVKETQFSIEQAYQEAQETTKAEQDIKAYVKAKEIDD---KITVQKSG 123

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFR 278
             I+I   D     +FD   +   P  I  L  IGE L    +    + + GHTD  P  
Sbjct: 124 DMIVIRFAD---ILLFDTGKADIKPGAIPNLNLIGEKLREYIDQGYHLRVEGHTDNQPIH 180

Query: 279 NIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
                 NW LS  RA +  +  L +   +  +IS   G   +    ++      + NRR+
Sbjct: 181 TAQFPSNWELSSARAIAVMRFYLEEMDFNPSKISA-EGMGEYHPISSNATSEERAQNRRV 239

Query: 335 DILV 338
           +I +
Sbjct: 240 EIKL 243


>gi|212638649|ref|YP_002315169.1| flagellar motor protein MotB [Anoxybacillus flavithermus WK1]
 gi|212560129|gb|ACJ33184.1| Flagellar motor protein B [Anoxybacillus flavithermus WK1]
          Length = 251

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K+  ++L K  S     +  + +   +    T  G+L++I    N  +FD  S+   P+ 
Sbjct: 94  KEEYEELKKIQSKFNEYVKTNQLSGELSVAMTEEGLLVTI---ANDVLFDSGSADIKPQY 150

Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306
             V +KI  +L  +    I I GHTD  P  N     NW LS+ RA +  ++L+++   +
Sbjct: 151 RNVAKKISNLLVMNPPRNIVISGHTDNVPINNAKFASNWELSVMRAVNFMKLLLENTKLD 210

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            ++    G+   +   ++      + NRR++IL+  ++
Sbjct: 211 PQLFSAKGYGEFKPIASNATPEGRAKNRRVEILIMPQE 248


>gi|157371226|ref|YP_001479215.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
 gi|157322990|gb|ABV42087.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
          Length = 321

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +   L     + +     + RL  L +K+   +        +   +L      G+
Sbjct: 86  GDDPTQQDGLVKRQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDEGL 145

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+        +L+ I  +L      IS+ GHTD  P+       
Sbjct: 146 RIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGY 205

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+SE ++ ++ G A           ++ NRRI +LV ++Q
Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITVLVLNKQ 265



 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +  +++ +K       ++ GSWKI YADFMT +MAFFLVMW++          I +YF 
Sbjct: 3   QNHPVVLVRKRKSHQAGHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T+      E +P      +            ++++ +   
Sbjct: 63  TPLKVALTSGDKSSSESSPIPGGGDDPTQQDGLVKRQIDTLEKRDEE 109


>gi|302874600|ref|YP_003843233.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690789|ref|ZP_07633235.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577457|gb|ADL51469.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
          Length = 236

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 6/197 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
            N  T+  E+      +   +       N   P      +     +K  +      S   
Sbjct: 37  SNVDTQKFEQISVALNNMFTKNPAESLLNDKNPEGEVPIVGEETPQKDAEKSVDLYSQIQ 96

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +  + +   V       GI I + ++    +FD   +    +    L KI E++A   
Sbjct: 97  QLIDKNTLQGQVKLTKDERGINIELNEK---ILFDSGKAEIKTDFATTLNKISEIIASIG 153

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            +I I GHTD  P   + ++N  LS  RA S  +     G+S++R+     +        
Sbjct: 154 NLIEIEGHTDNVPISGVYKNNRDLSYARANSVLEYFASRGISQNRMVT-KAYGEWYPIKP 212

Query: 324 SDP--MNSANRRIDILV 338
           +D     + NRR++IL+
Sbjct: 213 NDSDANRAENRRVNILI 229


>gi|148380179|ref|YP_001254720.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
 gi|153932823|ref|YP_001384478.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 19397]
 gi|153937092|ref|YP_001387994.1| chemotaxis MotB protein [Clostridium botulinum A str. Hall]
 gi|148289663|emb|CAL83767.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152928867|gb|ABS34367.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152933006|gb|ABS38505.1| putative chemotaxis MotB protein [Clostridium botulinum A str.
           Hall]
          Length = 254

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  L++  +   +     +S     ++    +++++  K+ 
Sbjct: 40  DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     +     V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNVTEAGRAKNRRVEISIVRK 237



 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN         
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +  +      +  + +   + +T++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVLQEGGSGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|167567201|ref|ZP_02360117.1| Chemotaxis lafU protein [Burkholderia oklahomensis EO147]
          Length = 303

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 5/208 (2%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           + +               +   K   +            P  +KE+   +   +  + LA
Sbjct: 62  AAEIAGQPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKERDDTIDTLEARRKLA 121

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +I +  + L  D     V       G+ ++I D     MF + S +   +   +L+ + 
Sbjct: 122 ARIRAEANALGMDG---NVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALA 178

Query: 257 EVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            VL+  T  + I GHTDA+ +       +NW LS  RA  A Q L+  G+ E ++ ++SG
Sbjct: 179 PVLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSG 238

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
                  +  DP +  NRR+++L+   Q
Sbjct: 239 MGDSIPAVPDDPRHDVNRRVELLLLTSQ 266



 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 11/187 (5%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN + D         IIK+     +     G+WK+ +ADF   LMA F+V+W++N T +D
Sbjct: 1   MNPNRDAGHG---PTIIKRAGRHHEEGG-GGAWKVAFADFTLALMALFMVLWVMNVTPED 56

Query: 61  TKKAIEQYF-------NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
            ++ +              G     + K +    +   R    +   + +   T ++++ 
Sbjct: 57  ERRRVAAEIAGQPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKERDDTIDTLEA 116

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +     + +           +  +   +  + ++   SEKG    +S  L+   +     
Sbjct: 117 RRKLAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKA 176

Query: 174 FLPPLSK 180
             P LS 
Sbjct: 177 LAPVLSS 183


>gi|90021803|ref|YP_527630.1| Fis family transcriptional regulator [Saccharophagus degradans
           2-40]
 gi|89951403|gb|ABD81418.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 288

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 10/160 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                 L+ + +++   LSG++       V     +  + I I        F    + P 
Sbjct: 73  EAEVAPLKQIEQQLEQALSGVL---ATGEVTLNGNQNWVEIVIDAN---SFFSSGQATPS 126

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304
            E   VL K+ ++++     +++ GHTD +P  N    +NW LS  RA +   +L  +GV
Sbjct: 127 DEARTVLNKVADIISPFDNAVAVGGHTDDTPINNAQFKNNWELSSARAVTVVNLLAFAGV 186

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           S +R+S + G+  +R    +        NRR+ + V   +
Sbjct: 187 SPERMSAV-GYGEYRPIADNQTPEGRSANRRVVLRVARDR 225



 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 2/133 (1%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +I+++       +    W + YADF+T+L AFF+VM+ ++  ++   + + +       +
Sbjct: 1   MIRRQPIETKINH--ERWLVSYADFITLLFAFFVVMYSVSQVNETKYRTLSETLGNAFSS 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
               +             +  K      E      +     + N  + +  +  +     
Sbjct: 59  SAKKTNKNRSPDTTEAEVAPLKQIEQQLEQALSGVLATGEVTLNGNQNWVEIVIDANSFF 118

Query: 136 NSQQSEHCKNSLT 148
           +S Q+     + T
Sbjct: 119 SSGQATPSDEART 131


>gi|220935190|ref|YP_002514089.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996500|gb|ACL73102.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 252

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 10/176 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
               E        ++ +     ++        +   L+       ++GV   TT   + +
Sbjct: 80  PPLFEEAPATYPGEQPLAEPLAREEAPAAESALEQALA---RQGGLEGVEVFTTPGQVEL 136

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNW 285
            I +     +F   S+    +   +L  +  VL  +   I++ GHTD  P        NW
Sbjct: 137 RIKE---GILFASGSAELRSDGRALLSSLMPVLNAAEGQITVEGHTDNVPIFTPIFPSNW 193

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            LS  RA    + L+  G++ +R+  + GFA  R    +D     + NRR+ ++++
Sbjct: 194 ELSAARASGVVRQLIALGLAPERLQAV-GFADTRPVAGNDTAEGRAENRRVSLVIQ 248


>gi|256820114|ref|YP_003141393.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581697|gb|ACU92832.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 456

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 84/274 (30%), Gaps = 16/274 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +    + GI  +    +R      D            +LK             ++     
Sbjct: 183 DYFQHAAGITIKFGKKDRDKDGVADKDDLCPDEPGKPELKGCPDRDNDGVADKDDACPDE 242

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +   + + C +          D C         N   +     +              ++
Sbjct: 243 AGKPELKGCPDRDNDGIADKDDACPDEAGPAEFNGCPDTDGDGVPDNVDQCKDVAGPKEN 302

Query: 195 LAKKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPL 245
                  T    V D   + V                 +   + D   T +FD + +   
Sbjct: 303 NGCPWPDTDGDGVLDKDDECVDVPGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIR 362

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P++  VL +I +VL        SI G+TD          N +LS +RAYS    L++ G+
Sbjct: 363 PQSATVLNQIVDVLNQYKNAKFSIEGYTD---ISGKRDKNQKLSENRAYSVKAYLIEKGI 419

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            E R++   GF   +   ++        NRR++I
Sbjct: 420 DEGRLTA-KGFGPDKPIASNKTKKGRELNRRVEI 452


>gi|158320524|ref|YP_001513031.1| OmpA/MotB domain-containing protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140723|gb|ABW19035.1| OmpA/MotB domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 254

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 85/246 (34%), Gaps = 12/246 (4%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                     +  T        L      L      E  K      S +      S+ + 
Sbjct: 6   QQEDQPAGAPLWMTTYSDMVTLLLCFFVLLFAFSTVETQKFDQLMQSLQNAIGVSSSGIL 65

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
              N          S    L   ++  L++  +   +  S L   ++   VL      G+
Sbjct: 66  DGGNTLFPNDFIDQSLMGDLTAGQRNELENFRELQETLESYLQEYDLETEVLVSQESRGL 125

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFR--N 279
           ++   D     +FD   +   P +  +LQ I E L       + I + GHTD       +
Sbjct: 126 MLRFQDN---VLFDPGKAELKPRSKEILQDIAEFLRSPELKDKDIRVEGHTDTVKVNPTS 182

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           I   NW LS  RA +  +  ++   +  +R   I+G+  ++    +D +   S NRR+DI
Sbjct: 183 IYPTNWELSTGRASNVVRYFIEEIDMDPERF-SIAGYGEYQPIAPNDTVENKSKNRRVDI 241

Query: 337 LVEDRQ 342
           ++   +
Sbjct: 242 VILRSE 247


>gi|23099679|ref|NP_693145.1| flagellar motor protein MotS [Oceanobacillus iheyensis HTE831]
 gi|22777909|dbj|BAC14180.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831]
          Length = 251

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 8/181 (4%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           E +    E+  +  +    +   + +K   +L + + +    L  +N+   +       G
Sbjct: 73  ESTGENSEDGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERG 132

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IAR 282
           +++ + ++    +F+   +  L E    L  IG +L+     +++ GHTD+ P  N    
Sbjct: 133 VVLVLQEK---ILFESGEAEILEEAGPFLNHIGTLLSELDNQVNVEGHTDSRPISNYRYP 189

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339
            NW LS  RA S  +  +++  +   R S + G+A        +++   S NRR++I++ 
Sbjct: 190 SNWELSGARASSVVRYFIEAESLHMSRFSTV-GYADTVPLEPNSNEANMSKNRRVEIIIL 248

Query: 340 D 340
           D
Sbjct: 249 D 249



 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++     +      W + Y+D +T+++ FF++++ ++  D      + + F       
Sbjct: 1   MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILD 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDE 104
              S    +  NP E + +N  D  IDE
Sbjct: 61  FLPSAVPLE--NPTESTGENSEDGKIDE 86


>gi|329904710|ref|ZP_08273911.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547854|gb|EGF32612.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 270

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
               I +       P + E+      ++  + +       L+ L        V    T  
Sbjct: 77  PPVPIEQPTVLPGRPPAAERQRIELLRREKESMTSIARDILNVLSPLISSGKVRVTQTSR 136

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-A 281
           G+ I I       +F    +    E+   L  I +VL+  T  I I GHTD  P  N   
Sbjct: 137 GVSIEINAS---VLFAPGEASLTNESGAALSAIAQVLSQDTHAIQIEGHTDNLPIGNATF 193

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
             NW LS  RA S  ++   +G++E+R++ + G   ++   ++D       NRR+++L+ 
Sbjct: 194 PSNWELSSVRASSVVRLFSNNGIAENRLTAV-GHGSNKPVGSNDTPEGRVRNRRVEVLIL 252

Query: 340 D 340
            
Sbjct: 253 A 253


>gi|170722824|ref|YP_001750512.1| flagellar motor protein MotD [Pseudomonas putida W619]
 gi|169760827|gb|ACA74143.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 285

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 10/182 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           +   S+   E         +  LA      L+ ++  +      L+  +    +      
Sbjct: 71  EQPLSVKPAEPLIKDSEQTDAGLAQNSVDPLKTISDDVRDAFGDLIKSD---QMTIRGNE 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             + I +    ++ +F    ++P  +   +++K+  +L      + + G TD  P R   
Sbjct: 128 LWVEIELN---SSLLFGSGDAMPSDKAFDIIEKVANILKPFANPVHVEGFTDNLPIRTAQ 184

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              NW LS  RA S  ++L   GV+  R++ + G+  ++    +D     + NRR+ +++
Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVI 243

Query: 339 ED 340
             
Sbjct: 244 SR 245



 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 2   RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 79  ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           + K I   DEQ    + ++  I  S           +    T          +
Sbjct: 62  SMKPIPIGDEQPLSVKPAEPLIKDSEQTDAGLAQNSVDPLKTISDDVRDAFGD 114


>gi|302878266|ref|YP_003846830.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302581055|gb|ADL55066.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 281

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 10/171 (5%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               ++      K + +++ +   +   +  L+A  +   V    T+ G+++   D   +
Sbjct: 77  DKRDARMLEQQRKIQAQMKAVDASLREVMGPLIAQGL---VGVHQTKRGVVV---DISAS 130

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293
            +F +      P     LQ++  VL+   + + + GHTD  P +      NW LS  RA 
Sbjct: 131 TLFREGEEKLQPGAQETLQQVAVVLSRENQSVEVEGHTDDVPIKTTQFPSNWELSSGRAS 190

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           S  + L+  GV E R++ + G A ++  +A+D     + NRR+ I +   +
Sbjct: 191 SVVRTLVTYGVPEKRLAAV-GMAANQPVVANDTPENRAKNRRVSITILSPE 240



 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W I YADF+T+L AFF+VM+ I++ ++   K      N     
Sbjct: 1   MARRRKRAEHDNH--ERWLISYADFVTLLFAFFVVMYSISSVNEGKYKTFSDSLNSAFSE 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
             +++  +   Q    +   +K D  + E   K    +K    + ++    L
Sbjct: 59  --SSATVVPSTQGQLFKVLVDKRDARMLEQQRKIQAQMKAVDASLREVMGPL 108


>gi|238788297|ref|ZP_04632091.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC
           33641]
 gi|238723543|gb|EEQ15189.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC
           33641]
          Length = 365

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 3/165 (1%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +   + K + RL  L +K+   +        +   +L      G+ I IID +N PMF  
Sbjct: 69  DSEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKM 128

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297
            S+   P    +L+ I  +L      IS+ GHTD  P+        NW LS DRA ++ +
Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYATGERGYSNWELSADRANASRR 188

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQTADDPVNRRISILVLNKQ 233



 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I +YF    K  +T+        +P      +    
Sbjct: 1   MTAMMAFFLVMWLLSVSSPQELTQIAEYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGS 117
             +     +S + +   
Sbjct: 61  VGEVRKHIDSEESRKEE 77


>gi|114778393|ref|ZP_01453240.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
 gi|114551356|gb|EAU53913.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
          Length = 251

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 85/251 (33%), Gaps = 13/251 (5%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            S+   +       + ++ +   +     +                  +      +   +
Sbjct: 2   SSNPESVSGKSSMEMIRSHILSDMEEREIEHDQSVTNEGWMVAYLDLMTLLLALFIIMGA 61

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                         S     +   P      I    +K+ ++D  ++I      L ++++
Sbjct: 62  VSHSKAGVKMQAPSSPQNTTSEGTPVSDNATIQRQGQKEGMEDNMRRI------LGSNSL 115

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              +  + +   I + +       +F    S     + + L+ + +VL   T  I + GH
Sbjct: 116 GGVMDVKMSPGQIRLQM---DAALLFKPGQSELDESSRIPLKNLAKVLQTYTGKIEVAGH 172

Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           +D++P        NW LS  RA +  + L+  G+   R+    G+A  R   ++      
Sbjct: 173 SDSTPLAGRGYQSNWELSTMRATAVVKALIDFGIEPGRLHAA-GYADTRPLASNATAEGR 231

Query: 329 SANRRIDILVE 339
           + NRR++  +E
Sbjct: 232 AKNRRVEFTIE 242


>gi|209964330|ref|YP_002297245.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
 gi|209957796|gb|ACI98432.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
          Length = 309

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 98/315 (31%), Gaps = 52/315 (16%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
                W I Y D +T+LM  FL M  I                           G+    
Sbjct: 35  EESEEWVISYMDMVTLLMTVFLGMIAI--------------------------LGMQGRL 68

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY-LSNSQQSEHCKNS 146
            PPE   +     +         V     +    +            L+ S         
Sbjct: 69  APPEPGPETAGGEAQTAAQAAEPVPPPARTVLADQTAPAALAPAPVTLAPSLPGPAPTVP 128

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
           +    E G    +++    + +      L P ++  + A++                   
Sbjct: 129 MAGFPETGTAGEETSAAPATPDGPPPPPLSPAARAWLQALEAA----------------- 171

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
               +   V F      I I + D+    +F   S+        VL ++  +LA     I
Sbjct: 172 ---GLPPDVGFTVEDRRIAIELRDR---VLFRSGSAALETAGTAVLDRLVPMLARMPGTI 225

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           ++ GHTD           NW LS  RA +  + L+ +GV   R+ + +G A  R      
Sbjct: 226 TVEGHTDPVAIATTRFPSNWELSAARAAAVVRHLVAAGVPAQRL-RATGLADSRPLTTDP 284

Query: 326 PMNSANRRIDILVED 340
              + NRR++I+++ 
Sbjct: 285 ARWAMNRRVEIVIDG 299


>gi|150390475|ref|YP_001320524.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950337|gb|ABR48865.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 243

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 12/208 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            +    +     +    S  +  S    E+      +  + L    +   +D  K     
Sbjct: 34  SEIDAKKFQAVMQSFQGSLGVLDSGKTIEDSDYITEAMLEELTTNEQVEWEDFRKLQEIV 93

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH- 261
            + L  + +   +L      G+++   D     +FD   +      + +L+ +   L   
Sbjct: 94  ENYLDENGLASDILVLLESRGLILRFHDN---ILFDSGRAELKSRPMEILKDLAGFLDGE 150

Query: 262 --STEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316
               + I + GHTD  P R  +    NW LS+ RA +  + L++ +GV+ +R S   G+ 
Sbjct: 151 EFQNKHIRVEGHTDTDPLRVTSKYETNWELSVARASNVVRFLIEDAGVTPERFSAA-GYG 209

Query: 317 HHRLKIASDPMN--SANRRIDILVEDRQ 342
            +R   A+D +   + NRR+D+++   +
Sbjct: 210 EYRPLAANDTIENKAINRRVDVVILRSE 237



 Score = 39.9 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
            +      +W   YAD +T+L+ FF++++  +  D    +A+ Q F      L + 
Sbjct: 2  RKEGSTGSPAWMATYADMVTLLLCFFILLFTFSEIDAKKFQAVMQSFQGSLGVLDSG 58


>gi|124514812|gb|EAY56324.1| putative OmpA family protein [Leptospirillum rubarum]
          Length = 265

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 8/241 (3%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            +    D K+ S     Q    + N+   +  Q  +                 K      
Sbjct: 24  ASAPPHDSKLDSAQMSLQNALNDENLKQAAPEQLDKASDALKHARELLKNGAPKKDVDHY 83

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +   +    ++     K  K+      +I    +    +++ + +L    +    
Sbjct: 84  VYLATQRIKIAEQKEKAAELQKEIKKASAHRDQIMLEANQAKIEHLKRELLKMKAKETNR 143

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
             ++      +FD + +   P  +  ++K+ E +       + I G+TD++     A  N
Sbjct: 144 -GLVLTLGNVLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDST---GTAAYN 199

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +LSL RA S    L+  G++  RI    G+       ++        NRR++I++ D +
Sbjct: 200 EKLSLKRAESVRDALVNDGINPQRIVT-KGYGPKYPIASNKTADGRQQNRRVEIVISDEK 258

Query: 343 G 343
           G
Sbjct: 259 G 259


>gi|310644267|ref|YP_003949026.1| ompa/motb domain protein [Paenibacillus polymyxa SC2]
 gi|309249218|gb|ADO58785.1| OmpA/MotB domain protein [Paenibacillus polymyxa SC2]
          Length = 271

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 13/231 (5%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S+   K+Y  +  ++    +   S   + S    +            ++  + ++     
Sbjct: 43  SSLDAKKYDVVVQSLQDTFHKGDSILEQGSGITGTADRYTSKNPPATKQPASNKKEAGST 102

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L++ +    K++K LQ+L   I   ++    + +   +       GI+I++ D+    +
Sbjct: 103 KLTEREQAFRKQEKELQNLMGVIQEYITD---NKLQNQIFVSDQPRGIVITLNDR---FL 156

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-----RNIARDNWRLSLDR 291
           FD+  +     +   L K+  +       ISI GHTD  PF      +  +DNW LS  R
Sbjct: 157 FDQGRAALKQGSANTLSKLASLFRDLKTPISIEGHTDNIPFTRSSNSSTYKDNWELSGAR 216

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A S  +  +          + +G+A  R    +        NRR++I V  
Sbjct: 217 ALSVLRFFIDREQLSPSGFQYAGYADTRPVGDNSTEAGRQKNRRVEITVLR 267


>gi|326796443|ref|YP_004314263.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326547207|gb|ADZ92427.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 280

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 98/336 (29%), Gaps = 79/336 (23%)

Query: 10  ENDQFIIIKKK---VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
           E  + I+ +++               W + YADF+T+L AFF                  
Sbjct: 3   ERPKPIVRRRREPYNPRSSADKGKDRWVLSYADFITLLFAFF------------------ 44

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                    L + S      +     +     D         N  D  IG  + ++  + 
Sbjct: 45  -------VALYSISLKQAGNEKQLTETLNGVFDAVQKSVKPINIGDPIIGEPDGEEILEV 97

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                    +  +     NS                                        
Sbjct: 98  EPEEAEESVSKGEEGSPDNSTPSQI----------------------------------- 122

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                   L + ISS  S L        V      + I + +   ++  +F +       
Sbjct: 123 -----YDLLNEVISSQFSSLTQSG---KVSISENESWISLEL---KSGLLFGEGEYELTN 171

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304
           E + +L  I  +L      + + G+TD  P    A    NW LS  RA +    L+  GV
Sbjct: 172 EAVALLIVISNILNSYPSPVLVEGNTDDQPVSGAAPFSSNWSLSSLRASAVVDELVFRGV 231

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           +  ++    GF+    K+   +D   + NRR+ + +
Sbjct: 232 NP-KLIAPIGFSSEHPKVRNRNDDSRAQNRRVTLKI 266


>gi|284040434|ref|YP_003390364.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283819727|gb|ADB41565.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 537

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 9/252 (3%)

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
              + + + + +    N      GST+          +   L + +  +           
Sbjct: 292 GKGDIVRVKLTDDTPANQPGKVGGSTDVATNTDATRPDPVALISGKVIDQLTGKPIEARI 351

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             + L    +  ++ +         +         R      +A+  +  L+        
Sbjct: 352 IYQTLPDGAEAGEATSDPITGEYKIVLPYGQRYTMRAVAKDFIAEGANIDLTQPK--GYQ 409

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
           +    +     I +  + + N   FD   S   PE+   L ++   L  + ++   +RGH
Sbjct: 410 QITDQQLKLIPIEVGSVVRLNNIFFDTGKSELRPESGPELDRLVTTLNDAPKMTIEVRGH 469

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD +        N +LS DRA +  +  +  G+  DRI+   GF   +   +++      
Sbjct: 470 TDNT---GSNEINAKLSQDRADAVREYFISKGIEPDRIAS-KGFGEAKPTASNNTEEGRQ 525

Query: 331 -NRRIDILVEDR 341
            NRR++ ++  +
Sbjct: 526 QNRRVEFVIVKK 537


>gi|83592409|ref|YP_426161.1| hypothetical protein Rru_A1073 [Rhodospirillum rubrum ATCC 11170]
 gi|83575323|gb|ABC21874.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 375

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 98/295 (33%), Gaps = 16/295 (5%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +            + +  + +  +    +S+ +  L+    + ++   LK      +
Sbjct: 82  LSQLSGQLRDANARAESLAAQVREVDDTKFENSRLRDQLAGVAKLEQDVAALKALRAELE 141

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK--GKDLCKSTDLEKSINKEENYFLPPLS 179
            +  RL   +        +E   +   R         L +      +I +  +      +
Sbjct: 142 AEVARLGGQLGEKEGQIAAERTLSEEARAHAALLNAQLEQLQAQLGAIQQALDASEARSA 201

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMF 237
           ++K++      RL     +    L    ++   +       R  + I       ++  +F
Sbjct: 202 EQKVVIADLGTRLNAALAEKVQELQRYRSEFFGRLREVLGAREDVRIVGDRFVFQSEVLF 261

Query: 238 DKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRNIAR-DNWRLS 288
              SS   P     L  +   L             ++ + GHTD  P    A   NW+LS
Sbjct: 262 PSGSSQLQPAGQDTLASLATTLMAIAARIPGDVDWILRVDGHTDRRPINTAAFQSNWQLS 321

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             RA S    L++ GV  +R+   +GF  ++           + NRRI++ ++ R
Sbjct: 322 AARAISVVNFLIERGVPPERL-AAAGFGEYQPIDPGQSDEALARNRRIELKLDQR 375


>gi|330502789|ref|YP_004379658.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
 gi|328917075|gb|AEB57906.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
          Length = 269

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 10/203 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              K  +  +S  G        ++     EE           +        LQ +A  + 
Sbjct: 41  NEGKYKILSESLTGVFNQPDRSIKPIPVGEERPRTSEPDNTSMDDPSSDSTLQSIASSVR 100

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L+  +    +        I I +    ++ +F    +IP  +   +++K+ ++LA
Sbjct: 101 EAFGDLIQSD---QLTVRGNEMWIEIEL---SSSLLFPSGDAIPNNQAFDIIEKVAKILA 154

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G TD  P +      NW LS  RA S  ++L   GV   R++ + G+   +
Sbjct: 155 PYQNPVKVEGFTDNLPIQTAQYPTNWELSTARASSIVRMLAMDGVDPSRLAAV-GYGEFQ 213

Query: 320 LKIASDPM--NSANRRIDILVED 340
               +        NRR+ +++  
Sbjct: 214 PVADNATAEGRGRNRRVVLVISR 236



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 4/106 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + +        
Sbjct: 1   MARRRQHEEHENH--ERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSESLTGVFNQ 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              + K I   +  P  S     + S+D+  + +++     S  + 
Sbjct: 59  PDRSIKPIPVGEERPRTSE--PDNTSMDDPSSDSTLQSIASSVREA 102


>gi|34497269|ref|NP_901484.1| flagellar motor protein MotD [Chromobacterium violaceum ATCC 12472]
 gi|34103125|gb|AAQ59488.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
          Length = 277

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
                T    ++ +         S  +    +   +L  L + ++  LS LV       V
Sbjct: 67  QTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQSG---EV 123

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
               +  GI I I D     +F    ++P  +++ ++  + ++LA     I + G TD +
Sbjct: 124 TITQSNQGIHIDIRDS---ALFAVGQAVPNQQSMPLMSNMAKLLAGVDNAIKVEGFTDDA 180

Query: 276 PFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           P R      NW LS  RA    ++  +SGV   R+  + G   ++    +      + NR
Sbjct: 181 PIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAV-GHGANQPVADNATADGRARNR 239

Query: 333 RIDILVED 340
           R+ I V+ 
Sbjct: 240 RVTISVQA 247



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   ++   N   W + YADF+T+L AFF+VM+ I++ ++   + +             
Sbjct: 4   RRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAF----R 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           +   I  +  PP   +   I++   + I K++   +      K
Sbjct: 60  SGTTITVQTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAK 102


>gi|307293778|ref|ZP_07573622.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
 gi|306879929|gb|EFN11146.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
          Length = 351

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 89/231 (38%), Gaps = 2/231 (0%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
                +K         +  +       +        + K            +I    +  
Sbjct: 58  TTEKQRKGLADYFTPTLVQVKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDAS 117

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRN 233
                  K      + + + + K++ + ++     + + K V F  TR G+ I +ID+ +
Sbjct: 118 GTKDQGGKATKAADRAKFESIKKELEARMARRHGINKLRKNVRFTETREGLRIDLIDEAD 177

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRA 292
             MF   +   LP+   ++ ++ + +      + +RGHTD  P+ +    +NW LS  RA
Sbjct: 178 FAMFAMGTDRLLPQARELVDEVAKTIRTMPNPLIVRGHTDGLPYSSGQTMNNWMLSSARA 237

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
            +  + L  SG+  DR ++I G A        D  +  NRR+ I++   +G
Sbjct: 238 EATRKALAASGIGNDRFARIEGVADREPFAKGDVYDPRNRRMSIILGWSRG 288



 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 89/224 (39%), Gaps = 3/224 (1%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
                N+   + II+KK +      ++ G+WK+ YADF+T +MAFFL+MW++ AT +  +
Sbjct: 4   KKRGANEPEPRPIIVKKIIVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K +  YF P    +   S G          +++     +  +     ++      T  + 
Sbjct: 64  KGLADYFTPTLVQVKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDASGTKDQG 123

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK---DLCKSTDLEKSINKEENYFLPPLS 179
                  +     + ++    + +      K +      ++ +  +    +E  F     
Sbjct: 124 GKATKAADRAKFESIKKELEARMARRHGINKLRKNVRFTETREGLRIDLIDEADFAMFAM 183

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
               L  + ++ + ++AK I +  + L+      G+ + + +T 
Sbjct: 184 GTDRLLPQARELVDEVAKTIRTMPNPLIVRGHTDGLPYSSGQTM 227


>gi|270262419|ref|ZP_06190690.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
 gi|270043103|gb|EFA16196.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
          Length = 321

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 3/180 (1%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224
             +  +   L     + +     + RL  L +K+   +        +   +L      G+
Sbjct: 86  GDDPTQKDGLVKKQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDEGL 145

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282
            I IID +N PMF   S+        +L+ I  +L      IS+ GHTD  P+       
Sbjct: 146 RIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGY 205

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            NW LS DRA ++ + L+  G+SE ++ ++ G A           ++ NRRI +LV ++Q
Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITVLVLNKQ 265



 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 46/107 (42%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +  +++ +K       ++ GSWKI YADFMT +MAFFLVMW++          I +YF 
Sbjct: 3   QNHPVVLVRKRKSHQAGHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T       E +P      +            ++++ +   
Sbjct: 63  TPLKVALTTGDKSSSESSPIPGGGDDPTQKDGLVKKQIDTLEKRDEE 109


>gi|126662605|ref|ZP_01733604.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
 gi|126625984|gb|EAZ96673.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
          Length = 467

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 87/269 (32%), Gaps = 16/269 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G+  +    +       D            + K      K   Q  E+     + +++  
Sbjct: 201 GLTFKFGGKDTDGDGIYDKDDACPEVAGLPEFKGCPDTDKDGIQDSEDACPEEAGTKELN 260

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQDLAKKIS 200
            C ++        +D C      K +N   +     ++ +          +         
Sbjct: 261 GCPDNDGDGIINSEDACPEEKGTKMMNGCPDADGDGVADKDDNCPTVAGAKDNAGCPWPD 320

Query: 201 STLSGLVADNIVKGVL--------FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   G+   +     +                +  + D   T +F+   +    +TI VL
Sbjct: 321 TDGDGVADKDDKCPTVAGTVANNGCPEVSDDTMKKLNDYGKTILFNSGKASFQKQTIPVL 380

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           Q +  +L        S+ GHTD++        N +LS +RA +    L+++G+   R+S 
Sbjct: 381 QAMTAILKEYPTAKFSLEGHTDST---GADALNQKLSEERAAAVKNFLVENGIDASRLSS 437

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILV 338
             GF       ++        NRR+++ +
Sbjct: 438 -KGFGESMPVDSNKTAKGKANNRRVEVKL 465


>gi|323341391|ref|ZP_08081635.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
 gi|323091268|gb|EFZ33896.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
          Length = 267

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 9/201 (4%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPP-LSKEKILAMKRKKRLQDLAKKISSTLS 204
           ++    + G+   K      +  K++       +         R +  Q L +       
Sbjct: 67  AVDNVIDMGETATKGKGASSASTKKQAAASEQHVQNSLSKQQARVQERQQLKEVAEKLKQ 126

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST- 263
            +                G+ +++    ++ +F+  S+        +L K+   L   + 
Sbjct: 127 DIQNTGRAGNTTVSYESDGVHLNL---DSSILFNSGSADLSDAVKQMLDKLVPDLKQVSS 183

Query: 264 EVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
             + + G+TD  P   R+    NW LS  RA +  +  +  G   +    +  +A ++ K
Sbjct: 184 NPVIVAGYTDNVPVSKRSNYASNWELSSARAVTVMRYFVSKGAISESNVSVQAYAENKPK 243

Query: 322 IASDPMN--SANRRIDILVED 340
            ++D     + NRR++I+++ 
Sbjct: 244 ASNDTDEGKAQNRRVEIIIQK 264


>gi|226310457|ref|YP_002770351.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
 gi|226093405|dbj|BAH41847.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
          Length = 269

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 8/190 (4%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            L      +      +        +EK L    +K  +DL K  +     +  + +   +
Sbjct: 73  PLDPQLQQQTLHKGAQEAEKQKTEEEKRLEEAVRKETEDLKKLQTKLDGYIQQNKLQDKL 132

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
             + T  G+LI+I+D     +FD   +   PE   +  ++  +L    + +++ GHTD  
Sbjct: 133 QTKLTDEGLLITILDN---ALFDSGKADLKPEARKLASEMAGMLVPHPKKVTVTGHTDNV 189

Query: 276 PFRNIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN 331
           P R      NW LS  R+ +  + +L    +   + S  +G   +     +  D   + N
Sbjct: 190 PIRRAEFPSNWDLSAKRSVNFLKVLLENKNLDPTKFSA-TGLGEYHPVAPNTTDEGRAKN 248

Query: 332 RRIDILVEDR 341
           RR+++ +   
Sbjct: 249 RRVEVAILRD 258



 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 56/170 (32%), Gaps = 1/170 (0%)

Query: 16  IIKKKVAIDDTPNN-LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           + K+         +   SW I YAD +T+L+A F+V++  +  D      + + F+    
Sbjct: 1   MAKRPKRHAHHEEHMDESWLIPYADLLTLLLALFIVLFASSEMDAKKFDQMVRSFSVAIN 60

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                          P+   Q     + +    K   + ++    +K+     +      
Sbjct: 61  GGTGVMNYPSPVPLDPQLQQQTLHKGAQEAEKQKTEEEKRLEEAVRKETEDLKKLQTKLD 120

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
              QQ++      T+ +++G  +    +      K +          ++ 
Sbjct: 121 GYIQQNKLQDKLQTKLTDEGLLITILDNALFDSGKADLKPEARKLASEMA 170


>gi|254497489|ref|ZP_05110282.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
 gi|254353304|gb|EET12046.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
          Length = 255

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 8/189 (4%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             K    S  +  + NK+        +++       KK        +   ++  +++   
Sbjct: 43  TSKYKSLSEGMNTAFNKKAQENSEQSTEDIKDGPHTKKVYGKFQDGLD-DINQSLSELED 101

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           +       +  I +   D ++  +F    +    E +V L +I   L  S  ++SI G+T
Sbjct: 102 QNYKINRQKGWIEL---DIKSGALFGSGDADLKAEALVKLMQIAGKLKKSHAIVSIEGYT 158

Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNS 329
           D  P        NW LS  RA S  +VL   G+   RI  ++G+        +  D   +
Sbjct: 159 DNVPIETPQYPSNWELSATRAASVGRVLNAYGIDSHRIM-VTGYGDQYPIADNVTDVGRA 217

Query: 330 ANRRIDILV 338
            NRR+ I++
Sbjct: 218 LNRRVSIII 226



 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 3/213 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +K+   +   ++   W + YADF+T+L AFF+VM+ I++ +    K++ +  N       
Sbjct: 4   RKRKVEEHVDHH--RWIVSYADFITLLFAFFVVMYAISSLNTSKYKSLSEGMNTAFNKKA 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +     E       ++       D     N    ++   N K   Q+    +   S +
Sbjct: 62  QENSEQSTEDIKDGPHTKKVYGKFQDGLDDINQSLSELEDQNYKINRQKGWIELDIKSGA 121

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                  +       K   +        +I   E Y    +  E        +     A 
Sbjct: 122 LFGSGDADLKAEALVKLMQIAGKLKKSHAIVSIEGYTD-NVPIETPQYPSNWELSATRAA 180

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +   L+    D+    V     +  I  ++ D
Sbjct: 181 SVGRVLNAYGIDSHRIMVTGYGDQYPIADNVTD 213


>gi|238751745|ref|ZP_04613233.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380]
 gi|238710016|gb|EEQ02246.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380]
          Length = 339

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 3/215 (1%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L+   +       +   S        S       +  +         +   + K + 
Sbjct: 19  PQELAQIAEYFRTPLKVALTSGDRSSSSSSPIPGGGDDPTQQDGEVRKHIDSAESRKEEY 78

Query: 191 RLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           RL  L +K+   +        +   +L      G+ I IID +N PMF   S+   P   
Sbjct: 79  RLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMR 138

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  +L      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+ E 
Sbjct: 139 DILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELLIGGLDEG 198

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 199 KVLRVIGMASTMRLKEQAADDPVNRRISILVLNKQ 233



 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++ +       I +YF    K  +T+        +P      +    
Sbjct: 1   MTAMMAFFLVMWLLSVSSPQELAQIAEYFRTPLKVALTSGDRSSSSSSPIPGGGDDPTQQ 60

Query: 101 SIDEHITKNSVDLKIGS 117
             +     +S + +   
Sbjct: 61  DGEVRKHIDSAESRKEE 77


>gi|70729063|ref|YP_258799.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf-5]
 gi|68343362|gb|AAY90968.1| motB protein [Pseudomonas fluorescens Pf-5]
          Length = 294

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DS++        D            +    +           L+ +A  IS+    L++ 
Sbjct: 58  DSDRSLKPIPIGDERPKTVTPAKPLVKDSDQTDAGIAGASDPLKSIADDISAAFGDLISS 117

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N    +        + I +    ++ +F    ++P  +   ++ K+ ++L      I + 
Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDQAFTIIDKVAKILKPFDNPIHVE 171

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           G TD  P +      NW LS  R+ S  ++L   GV+  R++ + G+   +    +    
Sbjct: 172 GFTDNLPIQTAQYPTNWELSSARSASIVRMLAMQGVNPARMASV-GYGEFQPVANNATAE 230

Query: 328 -NSANRRIDILVED 340
             + NRR+ ++V  
Sbjct: 231 GRARNRRVVLVVSR 244



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I +       +   +
Sbjct: 3   RRRQQEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISEALIGVFTDSDRS 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            K       P     +    ++  + + K+S     G        + + ++I      
Sbjct: 63  LK-------PIPIGDERPKTVTPAKPLVKDSDQTDAGIAGASDPLKSIADDISAAFGD 113


>gi|13473358|ref|NP_104925.1| hypothetical protein mlr3926 [Mesorhizobium loti MAFF303099]
 gi|14024107|dbj|BAB50711.1| mlr3926 [Mesorhizobium loti MAFF303099]
          Length = 343

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 103/326 (31%), Gaps = 22/326 (6%)

Query: 37  YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           + D   T+L+A       F++   +   +   K  +    N     L             
Sbjct: 19  FVDALSTLLLAIMFLLTVFVLAQFLLGREISGKDTVLARLNSQINELTQLLALERSTAQD 78

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
            + S  N           K+ ++  +                       Q +  + +L++
Sbjct: 79  KDDSLANLQASLSAAEAEKSRLEQLLAQGAGAGDQANQRAAALSGELDSQRQISQQALSQ 138

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +        ++    N                 +RL     +    L+   +D
Sbjct: 139 VEILNQQIAALRKQIGALEDALNVSEARDRDSNTKIADLGRRLNVALAQRVQELNRYRSD 198

Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259
              +       R  I I       ++  +F   S +      V ++K+ + +        
Sbjct: 199 FFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIP 258

Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                V+ + GHTD  P       RDNW LS  R+ S  + L+++GV  +R+    GF  
Sbjct: 259 PEINWVLRVDGHTDNKPLSGTGRFRDNWELSTARSTSVVKFLIENGVPANRLVAA-GFGE 317

Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341
            +    +D   +   NRRI++ + +R
Sbjct: 318 FQPLDPADTDEARNKNRRIELKLTER 343


>gi|254302883|ref|ZP_04970241.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323075|gb|EDK88325.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 212

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A         +     ++I++        F   S+         L  I + L
Sbjct: 74  DNQEKELKAKLQGTQAEVKKDGNALVINL---PGGVTFASDSANITSSFYSALNGIAQSL 130

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD++        N  LS  RA +  Q L+  GVS  RI   +GF   
Sbjct: 131 NNYPETRIQVNGYTDST---GNDAHNQELSQRRANAVAQYLVAQGVSSSRIVA-NGFGSS 186

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRR++I +   Q
Sbjct: 187 NPIASNSTQEGRLQNRRVEIKILPAQ 212


>gi|153931184|ref|YP_001384895.1| chemotaxis motB protein [Clostridium botulinum A str. ATCC 19397]
 gi|152927228|gb|ABS32728.1| chemotaxis protein MotB [Clostridium botulinum A str. ATCC 19397]
          Length = 420

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241


>gi|119947181|ref|YP_944861.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119865785|gb|ABM05262.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
          Length = 306

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 3/154 (1%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++ LQ L K++   +  +   +    +L E    G+ I +    +  M+++  +   P  
Sbjct: 113 QEELQFLMKRLDDLVEEI---DASNNILIEVIPDGLRILLTASEDQKMYERGGTQLTPFY 169

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +L +   V       + I GHTD++P+      NW LS  RA SA +++   G+ +  
Sbjct: 170 EDMLLEFSSVFNAIENGVVITGHTDSAPYNGQQVSNWELSSQRANSARRIMELGGLKKAN 229

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I+++ G A+ +     + ++S NRR+++++  RQ
Sbjct: 230 ITQVIGMANTKPIDKQNELSSINRRVEVIILTRQ 263



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 46/150 (30%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                  +  +WK+ +AD M  LM  FLV+W +   D   K+ I  YF     +      
Sbjct: 15  RHQAHEEHSSAWKLAFADLMVSLMCVFLVLWALQIADKKEKEDIIHYFRTGQMSTPQERM 74

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
                         +  D + D + T N+  ++     Q++    ++     +     S 
Sbjct: 75  FAQKNSLVSIPLMSSAKDNNTDINDTVNNALIQGEYNTQEELQFLMKRLDDLVEEIDASN 134

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           +    +  D  +                 +
Sbjct: 135 NILIEVIPDGLRILLTASEDQKMYERGGTQ 164


>gi|317129962|ref|YP_004096244.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474910|gb|ADU31513.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
          Length = 258

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 11/188 (5%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
                + D +   +  +N   P  +       +  ++L DL   +   L  L A+N+ + 
Sbjct: 67  PFDNPAEDRDTKDDPFDNEVDPFENFLDSKKEENNQQLDDL---LVEVLDFLEANNLYES 123

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +       G+++ + +Q    +F+ + +  + +    L K+G ++      I + GHTD+
Sbjct: 124 ISASRDDRGVVLVLQEQ---VLFESARAELISDATAFLDKVGTLIESVPNPIMVEGHTDS 180

Query: 275 SPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SA 330
            P        NW LS  RA S  + L+    + + R   + G+   R    +        
Sbjct: 181 RPIETFQFPSNWELSGARASSVIRYLVDNHDLDQSRFVSV-GYGDTRPIAPNTTNENLQK 239

Query: 331 NRRIDILV 338
           NRR+ I++
Sbjct: 240 NRRVVIVI 247


>gi|295136349|ref|YP_003587025.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
           SM-A87]
 gi|294984364|gb|ADF54829.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
           SM-A87]
          Length = 316

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 91/220 (41%), Gaps = 17/220 (7%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           S     ++   ++  +S + ++L    + ++     E   L  L K+     +R   L+ 
Sbjct: 89  SYDALEKNSSAAIAENSRQNRELLAQLEEKEKTLAAEQARLEKLQKDLAARSQRIDELEG 148

Query: 195 L-------AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           L          +   +S  + D   KG+  E     + +S+    N  +F+  S     +
Sbjct: 149 LIAAKDAKMNALKDAISKALTDFEGKGLTVEQRDGKVYVSM---ENKLLFNSGSWAVNAD 205

Query: 248 TIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKS-G 303
               + ++G VLA + ++   I GHTD  P+      +DNW LS  RA +  Q+L ++  
Sbjct: 206 GRQAVNQLGSVLAQNPDISVLIEGHTDNVPYGGNGPLKDNWDLSTKRATAIVQILRENSN 265

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +    ++   G   +     +D     + NRRI++++  +
Sbjct: 266 IDPQNLTAA-GRGEYAPVATNDTAEGKAKNRRIEVILTPK 304


>gi|331006366|ref|ZP_08329676.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
 gi|330419826|gb|EGG94182.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
          Length = 321

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 7/169 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                 ++ K  A      + +L    ++    L+       +   +    + IS+    
Sbjct: 57  SEQQNTTETKQAAESPSASVIELPTLETAFYQQLLPLIEEGAIEVSSNELWLQISL---S 113

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291
           N  +FD  +  P  +   V+ +I  ++  +   I + G TD           NW+LS  R
Sbjct: 114 NRILFDIGNVKPSEQANEVIAQIATIMKDTVNPIRVEGFTDNLAINTAQFPSNWQLSAAR 173

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +  Q+L  SGVS  ++S + G+   +    +      + NRR+ +++
Sbjct: 174 ASAIVQLLSASGVSPSQLSAV-GYGEFQPIADNSSEAGRAKNRRVVLMI 221



 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 67/185 (36%), Gaps = 5/185 (2%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           ++K++       +    W + YADF+T+L AFF+VM+ ++  ++   + +    N F   
Sbjct: 1   MLKRRSLDLHINH--ERWLVSYADFVTLLFAFFVVMYSVSQINESKYEELTSTLNGFFSE 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK---QYQRLENNIF 132
               ++     ++P     +     +         ++      +  +   Q       +F
Sbjct: 59  QQNTTETKQAAESPSASVIELPTLETAFYQQLLPLIEEGAIEVSSNELWLQISLSNRILF 118

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            + N + SE     + + +   KD      +E   +          S  ++ A +    +
Sbjct: 119 DIGNVKPSEQANEVIAQIATIMKDTVNPIRVEGFTDNLAINTAQFPSNWQLSAARASAIV 178

Query: 193 QDLAK 197
           Q L+ 
Sbjct: 179 QLLSA 183


>gi|152975140|ref|YP_001374657.1| flagellar motor protein MotS [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023892|gb|ABS21662.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
          Length = 225

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           +  +        F              +    +    L K  +      + +   +    
Sbjct: 4   RPPKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAEVMENTI 63

Query: 180 KEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K   +     +   L G V +N ++ V      TG+ I I+D     +FD
Sbjct: 64  PDISHEKNSEKVSSKKRMDNLYKKLKGYVTENGIQEVQVYREDTGVSIVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P RN     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISRLAGFFQSVPNPIVVEGHTDSRPIRNAKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   +  +R++ + G+A  +    +D     + NRR+ I V++
Sbjct: 181 HLIEVYEIDPNRLAAV-GYADTKPVAPNDSPDNWAKNRRVVIYVKE 225


>gi|292489120|ref|YP_003532007.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430]
 gi|292900239|ref|YP_003539608.1| motility protein B [Erwinia amylovora ATCC 49946]
 gi|291200087|emb|CBJ47213.1| chemotaxis protein (motility protein B) [Erwinia amylovora ATCC
           49946]
 gi|291554554|emb|CBA22155.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora
           CFBP1430]
 gi|312173278|emb|CBX81533.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora
           ATCC BAA-2158]
          Length = 302

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 3/202 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                     K                 +   +     +K+   K  + L+ +  ++ + 
Sbjct: 64  PIKPTMGQGNKTSFSESIIPGGGDDVIRQEGEVYKHQVDKLDKFKNVESLKKVKTRLETM 123

Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +       N    ++   T  G++I I D +  PMF   S  P      +LQ +  +L  
Sbjct: 124 IESDPRLSNFKSNLMLTLTDDGLMIQITDSQERPMFKTGSEAPESYMNGILQALVPLLKE 183

Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +S+ GHTD+  +   +    NW LS  RA +A +VL+ +G+ +DRI ++ G     
Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLINAGLDDDRILRVIGTGSRM 243

Query: 320 LKIASDPMNSANRRIDILVEDR 341
                   N  NRRI +LV  +
Sbjct: 244 GLADISADNPMNRRISVLVLSK 265



 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II ++K       ++ G+WKI YADFMT +MAFFLVMW++ ++ D  ++ I  YF    
Sbjct: 6   PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           K  M         ++       + I    +
Sbjct: 66  KPTMGQGNKTSFSESIIPGGGDDVIRQEGE 95


>gi|325954396|ref|YP_004238056.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437014|gb|ADX67478.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 297

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 15/242 (6%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
               +    L+   TN++ +    +N    L+    S+  ++++ ++ +    L K+   
Sbjct: 52  TQKNEEIAQLQQELTNKQTELDEQQNAFEALAQDS-SKELQDNIEKNRDLLNQLAKTRSD 110

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             S   E    +  +++ + L  +++K +  L + IS  L G         +        
Sbjct: 111 LTSKETELQAKIKRINELENLLAQQRKAIAKLKQSISDALRGFEGKG----ITVYEKNGQ 166

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR---N 279
           I +S+    N  +F         E I  L ++  VL    +  I I GHTD+ P+     
Sbjct: 167 IYVSM---ENKLLFSTGKWDVRQEGISALVQLSSVLKKQNDLNILIEGHTDSVPYGAKQG 223

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             +DNW LS+ RA +  ++L K GV   +++   G + +     +   +  + NRR++I+
Sbjct: 224 DVQDNWDLSVMRATAVTKILQKDGVRPTQMTAA-GRSKYIPIGDNATESGKAKNRRVEII 282

Query: 338 VE 339
           + 
Sbjct: 283 IT 284


>gi|319781002|ref|YP_004140478.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166890|gb|ADV10428.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 343

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 116/330 (35%), Gaps = 30/330 (9%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           + D   T+L+A   +M+++           + I    +     L +    +         
Sbjct: 19  FVDALSTLLLA---IMFLLTVFVLAQFLLGREISGK-DTALSRLNSQINELTQLLALERS 74

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           ++Q+K D   +   + ++   +     +         +      +       +      +
Sbjct: 75  TAQDKDDSLANLQASLSAAQAEKSRLERLLAQGAGAGDAANQRAAALGGELDSQRQISQQ 134

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               +        ++ K+       L+  +I       ++ DL ++++  L+  V +   
Sbjct: 135 ALSQVEILNQQIAALRKQIGALEDALNVSEIRDRDSNTKIADLGRRLNVALAQRVQELNR 194

Query: 213 ---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---- 259
                    + +L +     I+      ++  +F   S +      V ++K+ + +    
Sbjct: 195 YRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQ 254

Query: 260 ----AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
                    V+ + GHTD  P       RDNW LS  R+ S  + L+++GV  +R+    
Sbjct: 255 KEIPPEINWVLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA- 313

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           GF   +    +D   +   NRRI++ + +R
Sbjct: 314 GFGEFQPLDPADTEEARNKNRRIELKLTER 343


>gi|150019639|ref|YP_001311893.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
           8052]
 gi|149906104|gb|ABR36937.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 244

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             + ++ ++ K I   +     +     V  +    G+ ISI D     +F+   +  L 
Sbjct: 83  AEEDKMTEVKKMIEEEIKK---EGYSDKVKVDLNSEGLAISIQD---VVLFNSGEADVLK 136

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK-SGV 304
           +   +L KI  +L      I + G+TD  P      R NW LS  RA +    ++   G+
Sbjct: 137 DVSQLLLKISHMLYGLDNEIKVAGYTDNVPINNGKFRSNWDLSAMRAINVLNYMVSTGGI 196

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           ++++I  I  +  H  K ++      + NRR++I V  +
Sbjct: 197 NQEKI-SIQAYGEHMPKASNATEDGRAKNRRVEIFVVRK 234



 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 4/134 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W + Y+D +T+L+A F+VM+ +  TD    +++ + FN         
Sbjct: 3   KKKQHHEEHVDEAWLLPYSDMLTLLLALFIVMFAMGQTDKAKFQSMAKEFNMIFA----G 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G+  +      S +            K +   K+     KK+    +  +   S    
Sbjct: 59  GTGVMHQDGNSAISMEESGVSDNKAEEDKMTEVKKMIEEEIKKEGYSDKVKVDLNSEGLA 118

Query: 140 SEHCKNSLTRDSEK 153
                  L    E 
Sbjct: 119 ISIQDVVLFNSGEA 132


>gi|251794146|ref|YP_003008877.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
 gi|247541772|gb|ACS98790.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
          Length = 272

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 12/227 (5%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                   +      + S         +   S           ++      ++      S
Sbjct: 37  AASSTDARKFERMSEAFSAAFNSGAGIMDNPSVIKSGEQPQQQIDDGKKTSKDRHEDTES 96

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             + L  K ++ L+ L K++   +     + +   +  +  ++ ++I+I D     +F  
Sbjct: 97  NLQELIKKEQEDLEKLKKQLDQYIKK---NGLSSELETKLNQSQLMITISDN---ALFAS 150

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
            S     E+  +   I ++L   T   I + GHTD  P R    + NW LS  RA     
Sbjct: 151 GSDALKTESKELAANISKMLEPYTGYEIVVSGHTDDQPIRTQNFKSNWDLSSSRAIRFMD 210

Query: 298 -VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            +L  S +  +R S I G+  +R   ++D     + NRR+++ +  +
Sbjct: 211 VLLQNSKLKPERFSAI-GYGEYRPVASNDTTAGRAKNRRVEVSIIRK 256


>gi|307546933|ref|YP_003899412.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
 gi|307218957|emb|CBV44227.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
          Length = 317

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 3/194 (1%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL-SGLV 207
            DS    +          +  E       L +    + ++++  +DL ++I   + +   
Sbjct: 73  GDSVSMSETVIPGGGPDPVYTEGERARVDLRQRSRPSERQRRAFRDLQRRIEMAIDADPD 132

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
              +   + F+ T  G+ I ++D    PMF+  S    P    +L+ +  +L      +S
Sbjct: 133 LKQLRDQLRFDMTPEGLRIQLVDTEQRPMFELGSDRVAPYMRDLLRLMAPLLNELPNDLS 192

Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           I GHTD+  + N      NW LS  RA ++ + L+  G+   ++ +++GFA   +   ++
Sbjct: 193 ISGHTDSLAYLNGFQGYGNWELSSARANASRRELVAGGLDSAKLLRVAGFADQVVMPDTE 252

Query: 326 PMNSANRRIDILVE 339
           P +  NRRI++LV 
Sbjct: 253 PSDPVNRRIELLVL 266



 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
             ++ GSWKI  ADFMT LMA FLVMWI++      ++ + +YF+      +     +  
Sbjct: 19  HRHHGGSWKIALADFMTALMALFLVMWILSTASRQEREGVAEYFSTPLVAAIAGGDSVSM 78

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            +        + +    +          +     ++            +      +  ++
Sbjct: 79  SETVIPGGGPDPVYTEGERARVDLRQRSRPSERQRRAFRDLQRRIEMAIDADPDLKQLRD 138

Query: 146 SLTRDSEKGKDLCKSTDLEK 165
            L  D        +  D E+
Sbjct: 139 QLRFDMTPEGLRIQLVDTEQ 158


>gi|330808241|ref|YP_004352703.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376349|gb|AEA67699.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 294

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DS++        D            +    +           L+ +A  IS+    L++ 
Sbjct: 58  DSDRALKPIPIGDERPKTTTPAKPLVKDSEQVDAGIAGGSDPLKSIADDISAAFGDLISS 117

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N    +        + I +    ++ +F    ++P      ++ K+  +L      I + 
Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNPIHVE 171

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           G TD  P R      NW LS  R+ S  ++L   GV+  R++ + G+   +    +    
Sbjct: 172 GFTDDQPIRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASV-GYGEFQPVANNATAE 230

Query: 328 -NSANRRIDILVED 340
             + NRR+ ++V  
Sbjct: 231 GRARNRRVVLVVSR 244



 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I +       +   A
Sbjct: 3   RRRHTEEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSDRA 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            K       P     +     +  + + K+S  +  G        + + ++I      
Sbjct: 63  LK-------PIPIGDERPKTTTPAKPLVKDSEQVDAGIAGGSDPLKSIADDISAAFGD 113


>gi|158327337|emb|CAM82843.1| flagellar motor protein MotB [Yersinia enterocolitica W22703]
          Length = 302

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 116/329 (35%), Gaps = 61/329 (18%)

Query: 13  QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
           Q  I+K+      +  + G+WK+ +ADF   +MA F+V+WI+    ++ ++ I    N  
Sbjct: 9   QTTIVKRAARKKHSGGHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIVAQLNGK 68

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
                 +   I  +         + +D       TK+++ +++                 
Sbjct: 69  TIFAQQSFISIPSKSKSGGGKFSDSVDGHEQAKETKSNLAVEVPEP-------------- 114

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                   E    S     E  + + + T    + +  +   +P   +  I   K +   
Sbjct: 115 ---EQSLEELVDRSGREMEELTRIITQITSAYDAQSNLKMEVVPQGLRILIQDDKHRDMF 171

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q  +  ++   S L+A+       F      I+I               +        VL
Sbjct: 172 QRSSAVLTPFFSRLLAELAP---AFNEMDNKIII------------TGHTDASRYRDQVL 216

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                         ++ G                   +RA  A++ L+K G+ +DR+ +I
Sbjct: 217 ----------YNNWNLSG-------------------ERALMAHKALVKGGLDDDRVLQI 247

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDR 341
           +  A   L  +++P+ + NRRI+I+V  +
Sbjct: 248 NAMAEQMLLDSAEPLAAKNRRIEIMVLTK 276


>gi|49079216|gb|AAT49867.1| PA1041 [synthetic construct]
          Length = 211

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   SS         L  I E L    ++  +SI GHTD+         N +LS  RA +
Sbjct: 105 FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 161

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
               L+ +GV    I  + G    +    +      + NRR++IL++ R+G
Sbjct: 162 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIK-REG 211


>gi|206602390|gb|EDZ38871.1| Putative OmpA family protein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 265

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 83/238 (34%), Gaps = 8/238 (3%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
              D K+ S     Q    + N+   +  Q ++                 K         
Sbjct: 27  PPHDSKLDSAQMSLQNALNDENLKQAAPEQLNKASDALKHASELLKNGAPKKDVDHYVYL 86

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +   +    ++     K  K+      +I    +    + + + +L    +      +
Sbjct: 87  ATQRIKIAEQKEKAAELQKEIKKASAHRDQIMLEANQAKIERLKRELLKMKAKETNR-GL 145

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRL 287
           +      +FD + +   P  +  ++K+ E +       + I G+TD++     A  N +L
Sbjct: 146 VLTLGNVLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDST---GTAAYNEKL 202

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           SL RA S    L+  G++  RI    G+       ++        NRR++I++ D +G
Sbjct: 203 SLKRAESVRDALVNDGINPQRIVT-KGYGPKYPIASNKTADGRQQNRRVEIVISDEKG 259


>gi|74095554|emb|CAJ27320.1| conserved hypothetical protein [Cronobacter sakazakii]
          Length = 444

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L A+     V  + ++    +         MF    +   PE I +++++   +      
Sbjct: 311 LKAEIARHWVSVDESQRESRVIFH---GDSMFAVGDASVRPERIDIIRRVAAEVQRVNGE 367

Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GHTD++P R      N  LS  RA +      + G++ ++I+   G    +   ++
Sbjct: 368 VVIIGHTDSTPIRSGAFASNQALSEKRAQAVAAYFREQGIAPEKITS-KGAGDTQPIASN 426

Query: 325 DPM--NSANRRIDILVE 339
                 S NRR++I V 
Sbjct: 427 HDAQGRSQNRRVEIFVT 443


>gi|170759482|ref|YP_001787603.1| chemotaxis MotB protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169406471|gb|ACA54882.1| putative chemotaxis MotB protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 254

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  L++  +   +     +S     ++    +++++  K+ 
Sbjct: 40  DTAKLQKASQEFNIIFKAGSNVLQEGGSGGASVGKSGVSIVPSDSVTEDIKMKEIKSKLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +           V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIEKS---GYFDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237



 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN   K     
Sbjct: 2   KKRESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +  +      ++ + +   + +T++    +I S  +K+  +    +   +     
Sbjct: 59  SNVLQEGGSGGASVGKSGVSIVPSDSVTEDIKMKEIKSKLEKEIEKSGYFDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|120437856|ref|YP_863542.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117580006|emb|CAL68475.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 320

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 120/310 (38%), Gaps = 15/310 (4%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +T ++A  ++M   +         +E       +   + +K + + +   E   +    L
Sbjct: 5   LTSVLALLVLM--SSCVSSKKYGELESKNANLQRENRSVAKELENYRKSSEDLDKELSGL 62

Query: 101 SID-EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
             D E IT     L    T  +K Y+ LE +   L  +  +   +NS       G+   K
Sbjct: 63  KTDYETITTERNQLMEKLTALEKNYESLEKSYDALEQNSSAAIAENSRQNRDLLGQLDEK 122

Query: 160 STDLEKSINKEE--NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
              L +  N+ E     L   S+                  + + +S  + +   KG+  
Sbjct: 123 EAALLQEKNRLEKLEKDLALRSQRINDLENVIAAKDAKMNALKNAVSNALTNFEGKGLSV 182

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASP 276
           E     + +S+    N  +FD  S     E    +Q++G VL  + ++   I GHTD  P
Sbjct: 183 EQRDGKVYVSM---ENKLLFDSGSWAVNSEGRKAVQQLGTVLGQNPDIAVLIEGHTDNVP 239

Query: 277 FRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SAN 331
           +      +DNW LS  RA +  Q+L ++  +    ++   G   +    ++D     + N
Sbjct: 240 YGGSGQLKDNWDLSTKRATAIVQILRENSNIDPQSLTAA-GRGEYAPVGSNDTEAGKAKN 298

Query: 332 RRIDILVEDR 341
           RRI++++  +
Sbjct: 299 RRIEVILTPK 308


>gi|58038715|ref|YP_190679.1| hypothetical protein GOX0240 [Gluconobacter oxydans 621H]
 gi|58001129|gb|AAW60023.1| Flagellar motor protein [Gluconobacter oxydans 621H]
          Length = 333

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 105/349 (30%), Gaps = 39/349 (11%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYAD-FMTVLMAF------------FLVMWIINATDDDTK 62
           + +++    +  +        Y D   T+LM              FL      +     +
Sbjct: 1   MARRRRGSHNALDAWPG----YVDALSTLLMVVTFVLLVFVVGQQFL------SVSLSRR 50

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +            L        D+      +     D          ++  +I +   + 
Sbjct: 51  EHTLDALQKQLAELSHMLSMTEDKNKSLSSTVATLADEKQHNQAQLQTLSTQIAALTGQL 110

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           Q +         ++ QQ+    +   +  E  + L   ++      K E      ++   
Sbjct: 111 QSKDQALASADDTSKQQNSKISDLQAQIEELTRQLQAISNALDIEKKAEQGKDAQIADLG 170

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                      +  K+  S   G + D +             +       +  +F + S+
Sbjct: 171 SKLNLALADKVNQLKRYRSEFFGRLRDLLKDQKGVNVVGDRFVFQ-----SEILFPQGSA 225

Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
              PE    +  +                 ++ + GH D  P  +    NW LS +RA +
Sbjct: 226 DLTPEGRKEITTLAHTFKQVASTIPTDLPWILRVDGHADRQPIHSAFPSNWELSSERAIT 285

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             ++L+  GV    +   +GFA ++   A+      + NRRI+  + DR
Sbjct: 286 VVKLLIAEGVDPHHL-AATGFADYQPLDAASTPAAYARNRRIEFRLTDR 333


>gi|89893041|ref|YP_516528.1| hypothetical protein DSY0295 [Desulfitobacterium hafniense Y51]
 gi|89332489|dbj|BAE82084.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 264

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           +      +       S       +  + + D+  KI   +     +N+   +    T   
Sbjct: 77  DNMGKNNDPVTTETDSLLAAARAREDRDMSDMKAKIDQYIKE---NNLSAQLETRITEEM 133

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           ++ISI D     +FD  S++   E   +   I ++L         + GHTD  P      
Sbjct: 134 LMISIRD---YALFDSGSALVKTEAQKLAYIISDILRQYPGYNVEVAGHTDNLPINTAEF 190

Query: 283 -DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             NW LS  R+ +  + L    G+ + R   I G+   +    +      + NRR+++ +
Sbjct: 191 PTNWDLSSRRSLNFMKYLLQSDGLDQSRFRSI-GYGEFQPIATNTTEEGRAKNRRVEVNI 249

Query: 339 EDRQG 343
               G
Sbjct: 250 LRNFG 254


>gi|121997146|ref|YP_001001933.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
 gi|121588551|gb|ABM61131.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
          Length = 246

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 7/187 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +     ++   E     P  +             D A+ + +    L  +     V 
Sbjct: 61  QEDTPQAAPTVVDLEGPAPTPEQEVHDDLPPADPEHTDTAEILEALQEALAEELAAGDVE 120

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
                 G+L+   +Q     F   S       + VL ++  VLA +  +I + GHTD  P
Sbjct: 121 LGEGEDGVLLRFPEQAA---FALGSKEISEPFVPVLDRVAGVLADTPGLIRVSGHTDDIP 177

Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
            R+     N+ LS  RA S   +L  +G++ +R+    G    R    ++     + NRR
Sbjct: 178 IRSDRFRSNFELSTARAISVVHILKDAGITPERLIA-QGHGETRPLAPNETPEQRARNRR 236

Query: 334 IDILVED 340
           +D+ + D
Sbjct: 237 VDVHLVD 243



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 46/153 (30%), Gaps = 6/153 (3%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +           +W   +AD M VL+ FF++++ ++  D++  + + +            
Sbjct: 2   RYRSKAAARGSPAWMTTFADLMAVLVVFFVMLYTMSTIDNERYQKLAESLRQVL------ 55

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +  E  P    +   ++        +   DL           + LE     L+    
Sbjct: 56  GPSVVQEDTPQAAPTVVDLEGPAPTPEQEVHDDLPPADPEHTDTAEILEALQEALAEELA 115

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           +   +     D    +   ++     S    E 
Sbjct: 116 AGDVELGEGEDGVLLRFPEQAAFALGSKEISEP 148


>gi|312131420|ref|YP_003998760.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311907966|gb|ADQ18407.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 532

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 97/249 (38%), Gaps = 13/249 (5%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ--QSEHCKNSLTRDSEKGK 155
            DL+ +    +  +     +  +K++ Q +      + + +       K    R   +  
Sbjct: 292 EDLTQESTPNEGVLQATTLAEERKEEEQPIVPTKVAIISGKVTDLTTGKPIEVRIIYEDM 351

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
           +  +   +  S      Y +     ++         L  ++K I  T+ G   +   + +
Sbjct: 352 EDGEELGVATSDPITGEYKIVLPYGKRYSIRPESDNLLGVSKSIDLTIPGQYKEITGQDL 411

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274
                + G  I++    N   F+ + +    E+ + L ++  +L  +  + I ++GHTD 
Sbjct: 412 ETAPIKAGTAITL----NNVFFEFAKATLEKESFLELDRLIALLVKNPNMAIEVQGHTDN 467

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
                    N RLS  RA +     ++ G++ DRI+  +GF   R   +++     + NR
Sbjct: 468 V---GSDNANMRLSQQRADAVKAYFVEKGIATDRITS-TGFGESRPVASNETTEGQAKNR 523

Query: 333 RIDILVEDR 341
           R++ ++  +
Sbjct: 524 RVEFVILRK 532


>gi|310659033|ref|YP_003936754.1| motility protein b [Clostridium sticklandii DSM 519]
 gi|308825811|emb|CBH21849.1| motility protein B [Clostridium sticklandii]
          Length = 216

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 11/177 (6%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +N  +                +Q+  K   +    L  + + + V       G+L+   D
Sbjct: 33  QNAPMLDSGLMDENTSSEVLEMQNFQKLEDTIQEYLDKNQLSESVTVLEEEAGLLLRFQD 92

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWR 286
                +FD  S+   PE++ ++  I ++L       + ISI GHTD  P  +     NW 
Sbjct: 93  N---ILFDSGSADLKPESLEIMSYIAQLLNAEDFKDKFISIEGHTDDVPMNSPRYPSNWE 149

Query: 287 LSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS+ R+ +  + L++ + +   RIS  SG++ +     +D     + NRR+DIL+  
Sbjct: 150 LSVGRSSNVVRFLVENNNMDPKRISA-SGYSEYHPVAQNDTAENRAKNRRVDILILK 205


>gi|260438796|ref|ZP_05792612.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
 gi|292808785|gb|EFF67990.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
          Length = 265

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 8/226 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ST   +++Q +  +     +                 G           S     +    
Sbjct: 38  STIDAEKFQEVIASFSSSYSVLDGGSTGIDDGMLIASGASQLTQLSEYYSSMGASDDDSD 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               +K   +  K+ L+D  +      + L        +  + T+  + +++   +   +
Sbjct: 98  KSEIDKAQDLIGKEELKDSEQMGDKIENLLDKMGQSNNIEVQVTQHYVCLNM---KGALL 154

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFR-NIARDNWRLSLDRAYS 294
           F+ +S+    +   VL  +  +L      +I I GHTD  P   +I   N  LS  RA +
Sbjct: 155 FNSASATLTSDAEKVLSDVAVILKMYEDNLIEIEGHTDNVPINWDIFTSNNVLSDYRALA 214

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            +  L+  G+S  ++   SG   +    ++D     + NRR++I +
Sbjct: 215 VFDFLVDKGISPVKLKH-SGRGEYNPIASNDTAEGRAQNRRVEIKI 259



 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 6/221 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   +D P     W   ++D M +L+ FF++++ ++  D +  + +   F+     L   
Sbjct: 3   RKKNEDPPIKTDGWMNTFSDLMNLLLCFFVMLFSMSTIDAEKFQEVIASFSSSYSVLDGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S GI D       +SQ      + E+ +           ++  + Q L        + Q 
Sbjct: 63  STGIDDGMLIASGASQL---TQLSEYYSSMGASDDDSDKSEIDKAQDLIGKEELKDSEQM 119

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +  +N L +  +      + T     +N +        S       ++   L D+A  +
Sbjct: 120 GDKIENLLDKMGQSNNIEVQVTQHYVCLNMKGALLFNSASATLTSDAEKV--LSDVAVIL 177

Query: 200 SSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                 L+  +     V            + D R   +FD 
Sbjct: 178 KMYEDNLIEIEGHTDNVPINWDIFTSNNVLSDYRALAVFDF 218


>gi|296329053|ref|ZP_06871559.1| proteobacterial sortase system OmpA family protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153857|gb|EFG94669.1| proteobacterial sortase system OmpA family protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 208

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A               ++I++        F   S+         L  I + L
Sbjct: 70  DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANITSGFYSALNGIAQSL 126

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD +        N  LS  RA +  Q L+  GVS +RI   +GF   
Sbjct: 127 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSNRIVA-NGFGSS 182

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRR++I +   Q
Sbjct: 183 NPIASNSTPEGRLQNRRVEIKILPAQ 208


>gi|56476024|ref|YP_157613.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
 gi|56312067|emb|CAI06712.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
           aromaticum EbN1]
          Length = 232

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +++    + L       GV  +     I +   +      FD + +   P+   VL ++ 
Sbjct: 74  RQMDKQEAELREQMAGTGVEVQRQGDTIRLQAPENIT---FDTNRADIKPQFQPVLGQLA 130

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + +    +  I + GHTD+      A  N  LS +RA +    L++ GV  +R++ + G+
Sbjct: 131 QSIQQYPDTVIQVEGHTDSV---GSASYNQTLSENRAGAVRSYLIQRGVDANRLAAV-GY 186

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              R    +      + NRR+++L+
Sbjct: 187 GLTRPVADNSTAAGRAQNRRVEMLI 211


>gi|15596238|ref|NP_249732.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
 gi|116048969|ref|YP_792229.1| hypothetical protein PA14_50880 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152988234|ref|YP_001349691.1| hypothetical protein PSPA7_4338 [Pseudomonas aeruginosa PA7]
 gi|218892997|ref|YP_002441866.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254234177|ref|ZP_04927500.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
 gi|254239398|ref|ZP_04932720.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
 gi|296390597|ref|ZP_06880072.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           PAb1]
 gi|313105992|ref|ZP_07792253.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
 gi|9946954|gb|AAG04430.1|AE004536_9 probable outer membrane protein precursor [Pseudomonas aeruginosa
           PAO1]
 gi|115584190|gb|ABJ10205.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166108|gb|EAZ51619.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
 gi|126192776|gb|EAZ56839.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
 gi|150963392|gb|ABR85417.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
 gi|218773225|emb|CAW29037.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|310878755|gb|EFQ37349.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
          Length = 210

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   SS         L  I E L    ++  +SI GHTD+         N +LS  RA +
Sbjct: 105 FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 161

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
               L+ +GV    I  + G    +    +      + NRR++IL++ 
Sbjct: 162 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIKR 209


>gi|114327745|ref|YP_744902.1| hypothetical protein GbCGDNIH1_1081 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315919|gb|ABI61979.1| chemotaxis motB protein [Granulibacter bethesdensis CGDNIH1]
          Length = 350

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 110/351 (31%), Gaps = 32/351 (9%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70
           +++    +  +        Y D   T+LM        F++     +     K+      N
Sbjct: 5   RRRNTSGENLHVWPG----YVDALSTLLMVIIFVLLVFVLAQAFLSYTLAGKEHRLDELN 60

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                +                S +   + +  +      +  +     ++K     +  
Sbjct: 61  RQLAIISRQFALEQQHSTQLAHSLERLRNEAAGKEADMARLRTQTVVLAEQKSRLESQLA 120

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                  +              K   L +  D  ++I ++       L   +  +  + +
Sbjct: 121 GRDQDVKRAEAKLAELDQTIHSKDTALDRLRDDLEAIRRQLAAVQSALDASEKESQSKDR 180

Query: 191 RLQDLAKKISSTLSGLVAD---------NIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            + DL  +++  L+  V +           ++ VL       ++      ++  +F   +
Sbjct: 181 TIADLGMRLNVALAEKVEELKKYRSEFFGKLREVLAGRPGIQVVGDRFVFQSDVLFPSGN 240

Query: 242 SIPLPETIVVLQKIGEVLAH--------STEVISIRGHTDASP-FRNIARDNWRLSLDRA 292
           +    +    ++ I   L             ++ + GH D           NW LS  RA
Sbjct: 241 ADLTEQGRQQVKDIAAALIQLSKKFPPNVNWLLRVDGHADRQKMVNGKFASNWELSAQRA 300

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            +  ++L++ GV  + +S    FA ++     D     + NRRI++ + DR
Sbjct: 301 INVARLLIEQGVPGNHVSA-DAFADYQPVSQGDSEADLAKNRRIELRLTDR 350


>gi|322806981|emb|CBZ04551.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
           065]
          Length = 247

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 ARFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241


>gi|87119461|ref|ZP_01075358.1| flagellar motor protein [Marinomonas sp. MED121]
 gi|86164937|gb|EAQ66205.1| flagellar motor protein [Marinomonas sp. MED121]
          Length = 281

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                  E + ++  +    P    + +  K+ + +Q+L + I + L     + +   + 
Sbjct: 90  AEDEAFQELTPDRGSDPSPSPQQNIQTVVDKKLQVVQELNQMILTHLGEYQQNGL---IS 146

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              +   I I +   +   +F         E + VL  I EVL   +  I + GHTD  P
Sbjct: 147 INESELWIEIEL---KAGLLFSSGEFELTNEAVAVLMSISEVLKRYSYPIVVEGHTDNLP 203

Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
             +     NW+LS  RA S    L+  G++  ++  + G +  + K+  ++D   + NRR
Sbjct: 204 VSSNKYTSNWQLSSARASSVVDELVNGGINP-QLIAVLGLSSEKPKVRNSNDFSRARNRR 262

Query: 334 IDILV 338
           + + +
Sbjct: 263 VTLKI 267



 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 16  IIKKKVA--IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
           I K++     +DT  N   W + YADF+T+L AFF+ ++ I+  +    K + +      
Sbjct: 11  ISKRRRLGLRNDTNQNKQRWILSYADFITLLFAFFVALYSISLKNQGDSKLLTETLEGVM 70

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           + +  + + I   +    ++          +  +  S   +
Sbjct: 71  QAVQLSVQPINIGKVTTGKAEDEAFQELTPDRGSDPSPSPQ 111


>gi|253990166|ref|YP_003041522.1| flagellar motor protein MotB [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781616|emb|CAQ84779.1| chemotaxis motb protein [Photorhabdus asymbiotica]
          Length = 327

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%)

Query: 181 EKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           E + A    +RL  L +++    ++      +   +L +    G+ I IID+ N PMF  
Sbjct: 102 EVVEANDDARRLNRLREQLDQLIITDPRLKALRPHLLIDMMDEGLRIQIIDRENRPMFMI 161

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297
            S+        +L+ I  +L      IS+ GHTD   + N      NW LS DRA ++ +
Sbjct: 162 GSAKVESYMSDILRAIAPILNDIPNKISLSGHTDDLKYANGERGYSNWELSADRANASRR 221

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  G+ E++I ++ G A        D  +  NRRI ILV ++Q
Sbjct: 222 ELLIGGLDEEKILRVVGMASTVRLKQEDASSPVNRRISILVLNKQ 266



 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 44/90 (48%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           +I  K+   +D  ++ GSWKI YADFMT +MAFFLVMW++  +       I +YF    +
Sbjct: 8   VIKVKRRKRNDIKHHGGSWKIAYADFMTAMMAFFLVMWLLAISSPQELTRIAEYFRTPLQ 67

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
             +   +   D  NP      + +    D 
Sbjct: 68  VAINKGERSSDSSNPIPGGGLDVLYQEGDT 97


>gi|150024266|ref|YP_001295092.1| OmpA family outer membrane protein P60 [Flavobacterium
           psychrophilum JIP02/86]
 gi|113927364|emb|CAL07968.2| outer membrane protein A [Flavobacterium psychrophilum JIP02/86]
 gi|149770807|emb|CAL42272.1| Outer membrane protein OmpA family P60 [Flavobacterium
           psychrophilum JIP02/86]
          Length = 465

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 84/299 (28%), Gaps = 21/299 (7%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
             ++ T   + +   +       +L     G+  +    +       D            
Sbjct: 174 LSLSTTYKKSFETRAE-----LPSLFQHFAGLTFKFGGKDTDGDGIYDRDDACPEAAGLK 228

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
             +             ++     +       C ++         D C       ++N   
Sbjct: 229 QFQGCPDTDGDGIADKDDACPEAAGLAALNGCPDTDGDGIADKDDACPEVAGLAALNGCP 288

Query: 172 NYFLPPLSKEKILAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +     ++  K    K               D    +            V          
Sbjct: 289 DTDGDGVADMKDKCPKVAGPRDNGGCPWPDTDGDSVLDKDDKCPTVKGTVANNGCPEVSE 348

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIA 281
             +  + D   T +FD +      +T+ +L  +  +L        SI G+TD        
Sbjct: 349 EAIKKLNDYAKTILFDNAKFTFQKQTLPILDAMVAILNEFPTSKFSIEGNTDN---SGKK 405

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             N  LS +RA +    L+  G+S DR++ I G+       ++      + NRR+++ V
Sbjct: 406 ATNQTLSENRAKAVADFLISKGISSDRLTSI-GYGDSMPIASNKTKAGKAQNRRVEVKV 463


>gi|262274025|ref|ZP_06051837.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
 gi|262221835|gb|EEY73148.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
           101886]
          Length = 208

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +    +    +    G+        I + +        F  + S   P     L  + 
Sbjct: 66  QYMDRQEAAFREELAGSGIEVVREGDNIRLVMPSNIT---FGTNQSGISPGFYQSLDAVA 122

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V+       +SI GHTD++     A  N  LS  RA S    L++S V+  R+  ++G+
Sbjct: 123 RVMNEYDKTFLSIEGHTDST---GDAAYNMTLSEKRAESVKSYLLRSAVNAKRLY-VTGY 178

Query: 316 AHHRLKIASD--PMNSANRRIDILVEDRQ 342
              +   ++D     + NRR++I +   Q
Sbjct: 179 GETQPIASNDTSTGRAQNRRVEIQIVPNQ 207


>gi|161504516|ref|YP_001571628.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865863|gb|ABX22486.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 559

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 6/265 (2%)

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              ++        P +S+   +       +         G    ++    +         
Sbjct: 269 WLYTRTCLQFSRKPGQSAPASLFPDAVLPLLAPFASTVQGGQRTRRLILLMWLCALTALG 328

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
                +        ++  +      D  +   +            +    + +     L 
Sbjct: 329 ISALNNRDLIRQVSTDLQRWNAIPMDHYRPKAESLAALKQDALLLERWQRQGEPLRYSLG 388

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                 L   +   I             +  I+   +  +FD   S+  P +  +L    
Sbjct: 389 YYPGQRLWLALQQAIDTWTPPPAPEPKPVPKIVRLDSMSLFDSGKSVLKPGSTKMLVNSL 448

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +       I + GHTD +      + N  LSL RA +    +  +G   +    + G+
Sbjct: 449 LGIKARPGWLIVVSGHTDNT---GSVQLNQTLSLQRAEAVRNWMRDTGDVPESCFAVQGY 505

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
              R   ++D  +    NRR++I +
Sbjct: 506 GDSRPIASNDTPDGRAHNRRVEISL 530


>gi|77165507|ref|YP_344032.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|76883821|gb|ABA58502.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
          Length = 286

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 23/279 (8%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  +F+ F            D +       Q + D ++ ++      + K      ++  
Sbjct: 16  VLGFFSVFLVAACAPPTKPVDLERADAAIEQAQADSNVAQYAPVRLDEAK---EALQRAQ 72

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
              E +         +   +           D     +++    + +   +     E   
Sbjct: 73  VAWEEDESVEEVEHLAYLAQQRAAIAEVAAADKAAQAEIKNLGQERQQMLMDVHELEARQ 132

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A ++ K  +  A K+   L+ L A+   +G +                   +F+  S+  
Sbjct: 133 AKEQAKMAEIRADKLEKRLAELNAEKTERGYVLT-------------LGDILFEVDSAEL 179

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
               +  L ++   L    +  + + GHTD++     A  N  LS  RA S Y  L+ +G
Sbjct: 180 TSGGMQNLFRLVTFLKEYPDREVVVEGHTDST---GSAVYNMELSQRRADSVYLFLVNNG 236

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           ++ DRI    G+        ++       NRR++I++  
Sbjct: 237 IAPDRIVA-HGYGQGYPVAPNNTTAGRQKNRRVEIVILG 274


>gi|327187188|dbj|BAK08928.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
           [Bacillus pseudofirmus]
          Length = 252

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q     +   +  +  +    + + E    +    F  P  +             D+ 
Sbjct: 40  DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L  + +   +       G+++ + ++    +F+ + +  L      L+K+G
Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            +L+    ++ + GHTD+ P  N     NW LS  RA S  + L++ + +   R    +G
Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   R  + +  +     NRR+ I++ D 
Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244



 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W + ++D MT+++ FF++++ ++  D    +AI + F       
Sbjct: 1   MKRRRRQQEK--GATKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              S   F+  +  E   +            + S   ++      ++ Q           
Sbjct: 59  FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              +   +  +    E+        +L  S       
Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154


>gi|254436394|ref|ZP_05049900.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
 gi|207088084|gb|EDZ65357.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
          Length = 344

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 28/304 (9%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
             +    AI   F P    + T++    D              +   E           G
Sbjct: 39  MKNKKTMAIMAIFTPLLLAVYTSALAEDDHPLYAPYKGWPPCAVMTGEGDMAPDGRSVTG 98

Query: 117 ----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                      +++       +         +  E      + +      L +  D    
Sbjct: 99  VICRSTLFIPDSDKDGVPDDKDQCPNTPPGVEVDEVGCPLDSDNDGVPDYLDQCPDTPMG 158

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +   E+        + +     +     +  +++S    L  D+   GV  +        
Sbjct: 159 VEVGEDGCPLDSDGDGVPDYLDQCPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPDTA 218

Query: 227 SIIDQRNTPM-----------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +D                 F   S+   P    +L K+ E +    +  I+I GHTD+
Sbjct: 219 YGVDVDEVGCPKPVVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDS 278

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
           +     A  N RLS  RA +A   L   G+   R+  I G+   R   ++      + NR
Sbjct: 279 T---GNADYNQRLSQLRAEAAMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNR 334

Query: 333 RIDI 336
           R+++
Sbjct: 335 RVEL 338


>gi|163858421|ref|YP_001632719.1| hypothetical protein Bpet4103 [Bordetella petrii DSM 12804]
 gi|163262149|emb|CAP44451.1| OmpA-family protein [Bordetella petrii]
          Length = 427

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           R   +F+  S+    + + VL ++ + L  +   I +RG+TD  P R      NW LS  
Sbjct: 303 RGDGLFESGSAEVREQYLPVLSRVADALRETQGNILVRGYTDNIPMRGARYPSNWHLSQA 362

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA +  ++L     +  R+ +  G         +D     S NRR++I + 
Sbjct: 363 RADAVKELLEARLDNPQRV-RAEGRGDADPVAPNDTAAGRSRNRRVEITLM 412


>gi|288553786|ref|YP_003425721.1| flagellar motor protein MotS [Bacillus pseudofirmus OF4]
 gi|34485061|gb|AAB94398.2| channel protein [Bacillus pseudofirmus OF4]
 gi|288544946|gb|ADC48829.1| Flagellar motor rotation protein motS [Bacillus pseudofirmus OF4]
 gi|327187185|dbj|BAK08926.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
           [Bacillus pseudofirmus]
          Length = 252

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q     +   +  +  +    + + E    +    F  P  +             D+ 
Sbjct: 40  DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L  + +   +       G+++ + ++    +F+ + +  L      L+K+G
Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            +L+    ++ + GHTD+ P  N     NW LS  RA S  + L++ + +   R    +G
Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   R  + +  +     NRR+ I++ D 
Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244



 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W + ++D MT+++ FF++++ ++  D    +AI + F       
Sbjct: 1   MKRRRRQQEK--GAPKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              S   F+  +  E   +            + S   ++      ++ Q           
Sbjct: 59  FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              +   +  +    E+        +L  S       
Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154


>gi|327187191|dbj|BAK08930.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
           [Bacillus pseudofirmus]
          Length = 252

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q     +   +  +  +    + + E    +    F  P  +             D+ 
Sbjct: 40  DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L  + +   +       G+++ + ++    +F+ + +  L      L+K+G
Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            +L+    ++ + GHTD+ P  N     NW LS  RA S  + L++ + +   R    +G
Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   R  + +  +     NRR+ I++ D 
Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244



 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W + ++D MT+++ FF++++ ++  D    +AI + F       
Sbjct: 1   MKRRRRQQEK--GASKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              S   F+  +  E   +            + S   ++      ++ Q           
Sbjct: 59  FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              +   +  +    E+        +L  S       
Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154


>gi|254433641|ref|ZP_05047149.1| OmpA family protein [Nitrosococcus oceani AFC27]
 gi|207089974|gb|EDZ67245.1| OmpA family protein [Nitrosococcus oceani AFC27]
          Length = 293

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 23/279 (8%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  +F+ F            D +       Q + D ++ ++      + K      ++  
Sbjct: 23  VLGFFSVFLVAACAPPTKPVDLERADAAIEQAQADSNVAQYAPVRLDEAK---EALQRAQ 79

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
              E +         +   +           D     +++    + +   +     E   
Sbjct: 80  VAWEEDESVEEVEHLAYLAQQRAAIAEVAAADKAAQAEIKNLGQERQQMLMDVHELEARQ 139

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A ++ K  +  A K+   L+ L A+   +G +                   +F+  S+  
Sbjct: 140 AKEQAKMAEIRADKLEKRLAELNAEKTERGYVLT-------------LGDILFEVDSAEL 186

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
               +  L ++   L    +  + + GHTD++     A  N  LS  RA S Y  L+ +G
Sbjct: 187 TSGGMQNLFRLVTFLKEYPDREVVVEGHTDST---GSAVYNMELSQRRADSVYLFLVNNG 243

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           ++ DRI    G+        ++       NRR++I++  
Sbjct: 244 IAPDRIVA-HGYGQGYPVAPNNTTAGRQKNRRVEIVILG 281


>gi|308273452|emb|CBX30054.1| hypothetical protein N47_D28630 [uncultured Desulfobacterium sp.]
          Length = 307

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 2/174 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGIL 225
            ++++   LP             + L+  A+KI+ T+S     +     +    T+ G+ 
Sbjct: 77  PDEQKPLSLPASPIAVDKRAFEMELLKSEAEKITKTISQTPEFNKFKDKITVTVTQEGMR 136

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDN 284
           I ++++     FD       P+T+ +LQ I +  LA     I I G+TDA P+ +    N
Sbjct: 137 IDLLEESEGLFFDIGKIHIKPDTVKLLQVIAKSHLAKLKNGIIIEGYTDARPYVSSDYTN 196

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           W LS +RA SA +VL +SG+ +D+I ++ GFA  +L++   PM+ +NRR+ IL+
Sbjct: 197 WELSTERANSARKVLEESGLRKDQILEVRGFADRKLRLPDKPMDFSNRRVSILL 250



 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           + E+ Q II+  K       ++ G+WK+ YADF+T +MA F+V+WI+  + +     I  
Sbjct: 2   DDEHIQPIIVV-KKVKGHGGHHGGAWKVAYADFVTAMMALFIVLWIVGQSKEVK-HYIGA 59

Query: 68  YFNPFGKNLMTASKGIFDEQNPP---ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           YFN  G        G+  ++  P     S       + +  + K+  +    + +Q  ++
Sbjct: 60  YFNDPGVFTNGRYGGVLPDEQKPLSLPASPIAVDKRAFEMELLKSEAEKITKTISQTPEF 119

Query: 125 QRLENNIFYLSNSQ 138
            + ++ I      +
Sbjct: 120 NKFKDKITVTVTQE 133


>gi|238795043|ref|ZP_04638637.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
           29909]
 gi|238725644|gb|EEQ17204.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
           29909]
          Length = 388

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182
              +   S  Q ++  +   T          KS+     I    +     + +     + 
Sbjct: 36  MWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSSSSSPIPGGGDDPTQQVGEVRKHIDS 95

Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             + K + RL  L +K+   +        +   +L      G+ I IID +N PMF   S
Sbjct: 96  EESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKMGS 155

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
           +   P    +L+ I  +L      IS+ GHTD  P+ N      NW LS DRA ++ + L
Sbjct: 156 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRREL 215

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  G+ E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 216 LVGGLDEGKVLRVVGMASTMRLKEQPGDDPVNRRISILVLNKQ 258



 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 48/102 (47%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +++K+ A     ++ GSWKI YADFMT +MAFFLVMW+++ +       I +YF    K 
Sbjct: 1   MVRKRKAKHGGGHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQQLTQIAEYFRTPLKV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +T+        +P      +      +     +S + +   
Sbjct: 61  ALTSGDKSSSSSSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 102


>gi|163754618|ref|ZP_02161740.1| phosphoglycerate kinase [Kordia algicida OT-1]
 gi|161325559|gb|EDP96886.1| phosphoglycerate kinase [Kordia algicida OT-1]
          Length = 457

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 21/286 (7%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
            F  +         GI  +    +       D        K   +            +  
Sbjct: 175 SFEDYLAPHFQHMAGIAIKFGGKDTDEDGIYDKDDACPDVKGLPEFNGCPDTDGDGIEDS 234

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AM 186
           +++    +       C ++        KD C       ++N   +     ++  K     
Sbjct: 235 KDDCPDTAGLAALNGCPDTDGDGIADAKDDCPEVAGTAAMNGCPDADGDGITDAKDNCPN 294

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVK-----------GVLFETTRTGILISIIDQRNTP 235
           +                 G++  +                         +  + +   T 
Sbjct: 295 EAGPSANKGCPWTDKDGDGVLDKDDRCPEVAGVAENDGCPPIPRMTEIEITELDNLARTV 354

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F+        ET  +L KI E++     E  +I GHTD+         N +LS  RA +
Sbjct: 355 YFNSGKDSFKQETYEILNKIVELIKGFPAEEFTIGGHTDSV---GSDSLNQKLSEKRANA 411

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
               L       ++ + I G+  +    ++      + NRR++I +
Sbjct: 412 VKSYLESK--LSNKFTAI-GYGENEPIASNRTRKGRAQNRRVEIKL 454


>gi|347153|gb|AAC36899.1| protein F [Pseudomonas fluorescens]
          Length = 317

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +A   +    + GHTD+         N +LS  RA + 
Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPDTNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            QVL+K GV+  RI+ + G+   R    +        NRR++
Sbjct: 275 KQVLVKDGVAPSRITSV-GYGESRPVADNATEAGRAVNRRVE 315


>gi|92113628|ref|YP_573556.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91796718|gb|ABE58857.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 283

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 7/247 (2%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
           D+          +    G+ +   +       +   +    +      +   S+K     
Sbjct: 36  DMLTLLITLFVLLLALTGNDDSAAEEALAFPVLGVPTLQASAWSPTFYVPPRSDKRYVPP 95

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           + T                +          +     + +              + GV+  
Sbjct: 96  RDTTFYTPPPMPPRPPRMIMVNPAPAEALVENAKAAVREPAGVRRLPNTLKPFIDGVVVT 155

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
            +  G+   I    N  +F  S +    E   VL+++ + L      I+I GHTD+ P  
Sbjct: 156 QSAQGLNFRI---ENHLLFSSSQADLTDEGRAVLRQLLDSLRAFDGEITIEGHTDSRPIA 212

Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                 NW LS  RA +  + L+  G+  + +  + G+A  R   ++D       NRR++
Sbjct: 213 TDRFPSNWELSTARATAVLRFLVGEGLDSEALRAV-GYADTRPLQSNDSAEGRAANRRVE 271

Query: 336 ILVEDRQ 342
           +++ + +
Sbjct: 272 LVLHEPE 278


>gi|298372337|ref|ZP_06982327.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275241|gb|EFI16792.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 700

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 75/258 (29%), Gaps = 7/258 (2%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            D     E  +      +  + +                       +          + C
Sbjct: 438 PDTPQDIEVDNDGCPKDTDGDGVYDYLDLCPDTPEGISVDENGCPIDSDGDGVPDDKDQC 497

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
            ++        K   K +D +   + ++     P     ++      +  D    +    
Sbjct: 498 PDTPKGLPVDAKGCSKDSDGDGVPDYKDKCPNTPKEVRGLVDENGCPKDTDGDGILDYKD 557

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                  + +       +  +L       +   FD   +   P +  VL+ I +++ ++ 
Sbjct: 558 ECPTIKGVKENQGCPPIKKEVLKVFKQALHGIQFDTGKATIKPVSRGVLKLIVDIMRNNP 617

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD+         N  LS  RA +  + L   G+ + R+    G+       
Sbjct: 618 DYNLIIAGHTDSQ---GNDALNMTLSEKRAAAVRKYLEDRGIDKRRLQS-KGYGETLPVA 673

Query: 323 ASDPM--NSANRRIDILV 338
            +      + NRR++  V
Sbjct: 674 TNKTAKGRAQNRRVEFTV 691


>gi|289208253|ref|YP_003460319.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288943884|gb|ADC71583.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 272

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             ++     S          D +  ++         L   +    +    + D   + ++
Sbjct: 69  DPRDDRPLASAAQPIQLAHPDRQALLDPLVAPLTGNLGDLEGRLHEPLPEVDDPDLEGTA 128

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           T +  + +   +GV          + I D+    +F    +   PE  ++L ++  +L  
Sbjct: 129 TTASRMREQAPQGVEVVEHPGRTELRIQDE---ILFASGQADLQPEGRMLLAQLEPLLDE 185

Query: 262 STEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              +I++ GHTD  P        NW LS  RA    + L+  G+  +R+  + G A  + 
Sbjct: 186 HDGLITVEGHTDNIPIATERFPSNWELSSARASGVVRYLLDQGLEAERLRAV-GRADTQP 244

Query: 321 KIASDPMNSA--NRRIDILVEDR 341
             ++D       NRR+ +++E  
Sbjct: 245 VASNDTARGRSENRRVALILESP 267



 Score = 36.1 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 11/159 (6%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
              D  +   +W + Y D +T+++  F++M      D    + +     P         +
Sbjct: 38  RQRDDEH---AWILTYLDVLTLVIVIFVIMLTF--MDPRDDRPLASAAQPIQLA-HPDRQ 91

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
            + D    P   +   ++  + E + +       G+     + +            +  E
Sbjct: 92  ALLDPLVAPLTGNLGDLEGRLHEPLPEVDDPDLEGTATTASRMRE-----QAPQGVEVVE 146

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           H   +  R  ++        DL+           P L +
Sbjct: 147 HPGRTELRIQDEILFASGQADLQPEGRMLLAQLEPLLDE 185


>gi|53804092|ref|YP_114257.1| OmpA domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53757853|gb|AAU92144.1| OmpA domain protein [Methylococcus capsulatus str. Bath]
          Length = 179

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 11/144 (7%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L  +     V  +  R  + +++ D+    +F +       E    + KI   L
Sbjct: 32  RQLNEQLRTEVEADEVKIQQLRDRLRVTMEDEL---LFPEGGYQISKEGKASIDKIIPTL 88

Query: 260 AHSTEVI-SIRGHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +T     + GHTD  P           NW LS  RA    + L   G+   R++   G
Sbjct: 89  QSATNHRIEVEGHTDNVPIGKHLAHRFSSNWELSAGRACEVVKYLQSKGIDPARMTAA-G 147

Query: 315 FAHHRLKIASDPMN--SANRRIDI 336
              ++   ++      + NRRIDI
Sbjct: 148 HGEYQPVASNATAEGKAQNRRIDI 171


>gi|213963452|ref|ZP_03391706.1| OmpA family protein [Capnocytophaga sputigena Capno]
 gi|213953860|gb|EEB65188.1| OmpA family protein [Capnocytophaga sputigena Capno]
          Length = 454

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 74/267 (27%), Gaps = 25/267 (9%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +      G  +    P+R +    D            +LK             ++   
Sbjct: 206 KDDACPDDPGKKELNGCPDRDNDGVADKDDACPDEAGLPELKGCPDRDGDGIADKDDACP 265

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             +   +   C ++         D CK     K  N                        
Sbjct: 266 DEAGKPEFNGCPDTDGDGVADNVDQCKDVAGPKENNGCPWPDTDGDG------------- 312

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 +                        +   +     T +FD + +   PE+  VL
Sbjct: 313 -----VLDKDDECPEEAGPASNNGCPEVTQEVQTQLNSFAKTILFDVNKATIRPESATVL 367

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             I  VL        SI G+TD          N +LS DRAYS    L+  G+ + R++ 
Sbjct: 368 NNIVNVLNKYKNAKFSIEGYTDT---SGNKAKNQKLSEDRAYSVKAYLIDKGIDQARLTA 424

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDI 336
             GF   +   ++        NRR++I
Sbjct: 425 -KGFGPEKPIASNKTKKGRELNRRVEI 450


>gi|309700460|emb|CBI99754.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
           ETEC H10407]
          Length = 296

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 56  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 116 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 175

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   DNW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 236 DQMLLDSKNPQSAGNRRIEIMVLTK 260


>gi|153213818|ref|ZP_01949026.1| outer membrane protein OmpA [Vibrio cholerae 1587]
 gi|229524210|ref|ZP_04413615.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
           VL426]
 gi|124115742|gb|EAY34562.1| outer membrane protein OmpA [Vibrio cholerae 1587]
 gi|229337791|gb|EEO02808.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
           VL426]
          Length = 321

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|229513857|ref|ZP_04403319.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
 gi|262192122|ref|ZP_06050283.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
 gi|297580859|ref|ZP_06942784.1| outer membrane protein OmpA [Vibrio cholerae RC385]
 gi|229349038|gb|EEO13995.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
 gi|262031971|gb|EEY50548.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
 gi|297534685|gb|EFH73521.1| outer membrane protein OmpA [Vibrio cholerae RC385]
          Length = 321

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|261211335|ref|ZP_05925623.1| outer membrane protein A precursor [Vibrio sp. RC341]
 gi|260839290|gb|EEX65916.1| outer membrane protein A precursor [Vibrio sp. RC341]
          Length = 322

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 209 DSSTFATASAELKPATVKKLDKIVGYLNQYPQAKVEVVGHTDST---GSDAYNQKLSERR 265

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 266 AQAVAKALEAQGIDASRISA-KGLGESSPIASNTTAEGREKNRRVELVI 313


>gi|229528782|ref|ZP_04418172.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
 gi|229332556|gb|EEN98042.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
 gi|327484732|gb|AEA79139.1| Outer membrane protein A precursor [Vibrio cholerae LMA3894-4]
          Length = 321

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|254286478|ref|ZP_04961435.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
 gi|150423427|gb|EDN15371.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
          Length = 321

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|108759341|ref|YP_630319.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463221|gb|ABF88406.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 639

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 77/276 (27%), Gaps = 11/276 (3%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P  ++         D     +       D            + K     +       + +
Sbjct: 338 PDIRDRCPNEPEDIDGFQDGDGCPDPDNDGDGIPDGEDGCANEKGPKHTKGCPDPNYDTD 397

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              + + + +   K     +    +D   +         ++    P              
Sbjct: 398 GDGVVDGEDACVDKPGPKSNKGCPEDENDADGDGIPDKLDKCPDKPGPKDYDGCPDTDGD 457

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + D              +                I I   +   +F+  S++   ++  
Sbjct: 458 EVPDNEDDCPEQFGPPENNGCPYDSPPYVVVESDRIRI---KGNVLFETGSAVIQKQSYP 514

Query: 251 VLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L ++  VL  +     + I GHTD          N  LS  RA S  + L+  G++  R
Sbjct: 515 LLDEVATVLRKNPTLGPVLIEGHTDNR---GSRALNMGLSDRRAKSVLEYLVAKGIARKR 571

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           +S   GF        +D     + NRR+D  +   +
Sbjct: 572 LSS-KGFGFDNPIATNDTALGRAKNRRVDFRLVRAE 606


>gi|312962248|ref|ZP_07776740.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
 gi|311283585|gb|EFQ62174.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
          Length = 295

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 10/203 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 +  D+++        +            +    +           L+ +A  IS
Sbjct: 50  SQALIGVFNDADRSLKPIPIGEERPRTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDIS 109

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +    L++ N    +        + I +    ++ +F  + ++P  +   ++ K+  +L 
Sbjct: 110 AAFGDLISSN---QMTVRGNELWVEIELN---SSLLFASADAMPSDQAFTIIDKVAAILK 163

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G TD  P        NW LS  RA S  ++L   GVS  R++ + G+   +
Sbjct: 164 PFENPVHVEGFTDNVPISTAQYPTNWELSSARAASIVRMLAMQGVSPGRLASV-GYGEFQ 222

Query: 320 LKIASDP--MNSANRRIDILVED 340
               +      + NRR+ ++V  
Sbjct: 223 PVANNATVEGRARNRRVVLVVSR 245



 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       +   
Sbjct: 3   RRRREPEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALIGVFNDADR 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           + K       P     +    ++  + +  +S +   G        + + ++I      
Sbjct: 63  SLK-------PIPIGEERPRTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDISAAFGD 114


>gi|295095728|emb|CBK84818.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 568

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           I+   +  +FD       P +  +L      +       I + GHTD++      + N  
Sbjct: 430 IVRLDSMSLFDTGKWALKPASTKLLVNSLVGIKAKPGWLIVVAGHTDST---GDDQSNQV 486

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           LSL RA S    +  +G   +    + G+   R    +D       NRR++I +
Sbjct: 487 LSLKRAESVRDWMRDTGDVPESCFAVQGYGESRPVATNDTAEGRALNRRVEISL 540


>gi|153006608|ref|YP_001380933.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030181|gb|ABS27949.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 440

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 28/288 (9%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +   +  G  + Q  P     +   L  D        + + G  ++        +    +
Sbjct: 153 DACPSQPGPRESQGCPVSKDSDSDALPDDIDRCPLDPEDRDGFQDEDGCPDADNDGDGVV 212

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +        ++       KD       + + +  +   +  L+             +D
Sbjct: 213 DKADACPLEPGAVEARGCPVKDRDGDGVSDPADSCPDVAGIKALAGCPDSDSDGIPDAED 272

Query: 195 LAKK-------------------ISSTLSGLVADNIVKGVLFETTRTGILISII--DQRN 233
              +                   ++  +         +        T + +     D + 
Sbjct: 273 KCPQQAGTKENGGCPDADTDGDALADRIDKCPTQFGPRPDGCPKKYTLVQVRREKIDIKQ 332

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRA 292
              F  +    LP++  +L ++ +VL     +   I GHTD+         N RLS  RA
Sbjct: 333 QVHFATAKFRVLPDSFPLLNQVVQVLRDFPNMQISIEGHTDSV---GGEALNMRLSQQRA 389

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            +    L+  GVS +R+  I GF   +   ++      + NRR +  +
Sbjct: 390 EAVLDYLISKGVSPERLEAI-GFGPTKPIASNKTASGRARNRRTEFRI 436


>gi|310639572|ref|YP_003944330.1| ompa/motb domain-containing protein [Paenibacillus polymyxa SC2]
 gi|309244522|gb|ADO54089.1| OmpA/MotB domain-containing protein [Paenibacillus polymyxa SC2]
          Length = 275

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 97/325 (29%), Gaps = 71/325 (21%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK       +   SW + Y+D MT+L+A F+V++ +++ D    + + Q       +  +
Sbjct: 3   KKRHEPHEEHADESWLLPYSDLMTLLLALFIVLFGMSSLDAKKFETMAQSL----SSAFS 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              G+ D       SSQ+       E +++        +++ +KQ  +           +
Sbjct: 59  GGTGVLDHSA-ANPSSQSMDMGKNKEEVSQPLKSKATSTSDLQKQLAQ----REEEDLKK 113

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             +     +  +        K    +  I   +N        E     ++          
Sbjct: 114 LKKQMDQYIQNNGLSTLLNTKLNQSQLMITISDNALFSSGQAEVKPEARK---------- 163

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++ ++S ++       V+       + IS         F  +  +    ++  L      
Sbjct: 164 LAKSISSMLQQFPGYDVIVSGHTDNVPIS------NSQFPSNFDLSAKRSLNFL------ 211

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                                                  +L+   +   +   I G+  +
Sbjct: 212 -------------------------------------RILLLNPQLDPTKFVSI-GYGEY 233

Query: 319 RLKIASDP--MNSANRRIDILVEDR 341
           R    +      + NRR++I V  +
Sbjct: 234 RPLAGNQTGAGRAKNRRVEISVLRK 258


>gi|104782795|ref|YP_609293.1| flagellar motor protein MotD [Pseudomonas entomophila L48]
 gi|95111782|emb|CAK16506.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
          Length = 285

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 9/206 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q       +  D E+        D      K     +     E+  A   +     L  
Sbjct: 46  KQISQALIGVFNDPERSMKPIPIGDERPLSVKPAEPLI--KDSEQTDAGLAQTSADPLKT 103

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                            +        + I +    ++ +F  + ++P      +++K+ +
Sbjct: 104 ITDDVHDAFGDLIKSNQMTVRGNELWVEIELN---SSLLFASADAMPSDVAFEIIEKVAK 160

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L      + + G TD  P R      NW LS  RA S  ++L   GV+  R++ + G+ 
Sbjct: 161 ILKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYG 219

Query: 317 HHRLKIASDPM--NSANRRIDILVED 340
            ++    +D     + NRR+ +++  
Sbjct: 220 EYQPVAGNDTADGRARNRRVVLVISR 245



 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 53/136 (38%), Gaps = 9/136 (6%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K I Q       +
Sbjct: 1   MARRRKTEEHENH--ERWLVSYADFITLLFAFFVVMYSISSINEGKYKQISQALIGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              + K       P     +  + +   E + K+S     G         +   +  + +
Sbjct: 59  PERSMK-------PIPIGDERPLSVKPAEPLIKDSEQTDAGLAQTSADPLKTITDDVHDA 111

Query: 136 NSQQSEHCKNSLTRDS 151
                +  + ++  + 
Sbjct: 112 FGDLIKSNQMTVRGNE 127


>gi|92114147|ref|YP_574075.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91797237|gb|ABE59376.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 330

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 2/218 (0%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
            +N +  ++   ++         D                   E       + ++   + 
Sbjct: 49  PKNELDNIAEYFRTPLAVALTGGDKSTASTSAIPGGGADPTFSEGERRRLDIRQQSRPSD 108

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + ++      +             +   +  +    G+ I ++D    PMF+  S+   P
Sbjct: 109 EIRRLRALRERLEREVREDPNLRQMSSQLRTDFIPEGLRIQLVDTDKRPMFELGSARLAP 168

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304
               +LQ +   L      IS+ GHTD   +        NW LS DRA ++ + L+ +G+
Sbjct: 169 YMRDLLQALAPELNDVPNAISLTGHTDDLRYAGGEKGYSNWELSADRANASRRALVAAGL 228

Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
              ++ ++SG         + P ++ NRRI I+V   +
Sbjct: 229 DSSKLLRVSGMGARVNLEGTQPSDAVNRRISIVVLSER 266



 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%)

Query: 27  PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86
            ++ G+WKI YADFMT LMA FLV+WI++    +    I +YF       +T        
Sbjct: 18  GHHGGNWKIAYADFMTALMALFLVLWILSMVPKNELDNIAEYFRTPLAVALTGGDKSTAS 77

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
            +       +      +          +     ++ +  R         +    +     
Sbjct: 78  TSAIPGGGADPTFSEGERRRLDIRQQSRPSDEIRRLRALRERLEREVREDPNLRQMSSQL 137

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            T    +G  +      ++ + +  +  L P  ++ + A+  +
Sbjct: 138 RTDFIPEGLRIQLVDTDKRPMFELGSARLAPYMRDLLQALAPE 180


>gi|126665356|ref|ZP_01736338.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
 gi|126629984|gb|EBA00600.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
          Length = 313

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 112/321 (34%), Gaps = 57/321 (17%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            ++    + +W + +AD M++L++FF+++   +  D    K I    +            
Sbjct: 5   PEEEKPGIPAWVVTFADLMSLLLSFFVLLLSFSEIDAQKFKQIAGELSAA---------- 54

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
            F  Q              I ++ +    +  + +  ++    +                
Sbjct: 55  -FGVQRDVPAVEVPMGTSIIFDNFSSAPAEPTVINEIKQTTTDQKPE------------- 100

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                              D  +             + +     K +++L+ L K +   
Sbjct: 101 ------------------VDTLRGAVDSAALAEATKAAKAAEQEKIQEQLEQLRKVLEPA 142

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L+          +     +  I+I + ++     F   S+    E   +L +I EVLA  
Sbjct: 143 LND-------GRIAVTQEQHRIVIRVEEK---GSFPSGSAKLTWEFESLLLEIAEVLASI 192

Query: 263 TEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320
              ++I GHTD  P        NW LS  RA S    L+ SG V  DR+  + G A    
Sbjct: 193 PGELTIEGHTDNVPISTDRFYSNWDLSAARAASVANALLASGTVEPDRL-AVKGLADTAA 251

Query: 321 KIASDPM--NSANRRIDILVE 339
           ++ +D     + NRR++I+++
Sbjct: 252 RVDNDSAENRAKNRRVEIIID 272


>gi|300817251|ref|ZP_07097469.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|307313501|ref|ZP_07593122.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|300530227|gb|EFK51289.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|306906669|gb|EFN37180.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|323181565|gb|EFZ66985.1| lateral flagellar motor protein B [Escherichia coli 1357]
 gi|323379881|gb|ADX52149.1| OmpA/MotB domain protein [Escherichia coli KO11]
          Length = 307

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271


>gi|288550313|ref|ZP_05969946.2| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
 gi|288315417|gb|EFC54355.1| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
          Length = 563

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + ++ +  +    I +    +  +FD       P +  +L  
Sbjct: 394 LIPPVEAAINDWTPPPPPRPIIKQIVQGPQTIRL---DSMSLFDTGRWALKPGSTKLLVN 450

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD++      + N  LSL RA S    +  +G   +    + 
Sbjct: 451 SLVGIKAKPGWLIVVAGHTDST---GDDKSNQVLSLKRAESVRDWMRDTGDVPESCFAVQ 507

Query: 314 GFAHHRLKIASDP--MNSANRRIDILV 338
           G+   R    +D     + NRR++I +
Sbjct: 508 GYGESRPVATNDTPEGRALNRRVEISL 534


>gi|15642211|ref|NP_231844.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586239|ref|ZP_01676029.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
 gi|121726579|ref|ZP_01679828.1| outer membrane protein OmpA [Vibrio cholerae V52]
 gi|147673624|ref|YP_001217730.1| outer membrane protein OmpA [Vibrio cholerae O395]
 gi|153817076|ref|ZP_01969743.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
 gi|153820798|ref|ZP_01973465.1| outer membrane protein OmpA [Vibrio cholerae B33]
 gi|153825329|ref|ZP_01977996.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
 gi|153829325|ref|ZP_01981992.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
 gi|227082337|ref|YP_002810888.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
 gi|229507710|ref|ZP_04397215.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
 gi|229512095|ref|ZP_04401574.1| outer membrane protein A precursor [Vibrio cholerae B33]
 gi|229519230|ref|ZP_04408673.1| outer membrane protein A precursor [Vibrio cholerae RC9]
 gi|229607214|ref|YP_002877862.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
 gi|254225790|ref|ZP_04919395.1| outer membrane protein OmpA [Vibrio cholerae V51]
 gi|254849343|ref|ZP_05238693.1| outer membrane protein OmpA [Vibrio cholerae MO10]
 gi|255747088|ref|ZP_05421033.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
 gi|262161368|ref|ZP_06030478.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
 gi|262167761|ref|ZP_06035463.1| outer membrane protein A precursor [Vibrio cholerae RC27]
 gi|298500409|ref|ZP_07010214.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
 gi|2641145|gb|AAB86826.1| putative outer membrane porin [Vibrio cholerae O395]
 gi|9656770|gb|AAF95357.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549505|gb|EAX59531.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
 gi|121631032|gb|EAX63411.1| outer membrane protein OmpA [Vibrio cholerae V52]
 gi|125621696|gb|EAZ50025.1| outer membrane protein OmpA [Vibrio cholerae V51]
 gi|126512344|gb|EAZ74938.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
 gi|126521590|gb|EAZ78813.1| outer membrane protein OmpA [Vibrio cholerae B33]
 gi|146315507|gb|ABQ20046.1| outer membrane protein OmpA [Vibrio cholerae O395]
 gi|148875166|gb|EDL73301.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
 gi|149741013|gb|EDM55082.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
 gi|227010225|gb|ACP06437.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
 gi|227014109|gb|ACP10319.1| outer membrane protein OmpA [Vibrio cholerae O395]
 gi|229343919|gb|EEO08894.1| outer membrane protein A precursor [Vibrio cholerae RC9]
 gi|229352060|gb|EEO17001.1| outer membrane protein A precursor [Vibrio cholerae B33]
 gi|229355215|gb|EEO20136.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
 gi|229369869|gb|ACQ60292.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
 gi|254845048|gb|EET23462.1| outer membrane protein OmpA [Vibrio cholerae MO10]
 gi|255735490|gb|EET90890.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
 gi|262023826|gb|EEY42525.1| outer membrane protein A precursor [Vibrio cholerae RC27]
 gi|262028679|gb|EEY47333.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
 gi|297541102|gb|EFH77156.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
          Length = 321

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|284924249|emb|CBG37350.1| putative type VI secretion protein [Escherichia coli 042]
          Length = 576

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD       P     L      +       I + GHTD +        N  LSL RA 
Sbjct: 447 ALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNT---GDPLRNQALSLKRAE 503

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    +  +G        + G+   R    +D     + NRR++I +
Sbjct: 504 AVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISL 550


>gi|218696635|ref|YP_002404302.1| hypothetical protein EC55989_3336 [Escherichia coli 55989]
 gi|218353367|emb|CAU99387.1| conserved hypothetical protein; putative membrane protein
           [Escherichia coli 55989]
          Length = 608

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD       P     L      +       I + GHTD +        N  LSL RA 
Sbjct: 479 ALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNT---GDPLRNQALSLKRAE 535

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    +  +G        + G+   R    +D     + NRR++I +
Sbjct: 536 AVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISL 582


>gi|187779120|ref|ZP_02995593.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
           15579]
 gi|187772745|gb|EDU36547.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
           15579]
          Length = 254

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 11/205 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K               S  +++      +     +S     ++    +++++   + 
Sbjct: 40  DTAKLQKASQEFNIIFKAGSNVVQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSNLE 99

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +           V       G+ I I D     +F+   +  L ++  +L +I ++L 
Sbjct: 100 KEIKKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                I I GHTD  P  N   R NW LS  RA +    L    G+  +++  I  +  +
Sbjct: 154 GLDNNIKITGHTDNKPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212

Query: 319 RLKIASDPM--NSANRRIDILVEDR 341
             K  +      + NRR++I +  +
Sbjct: 213 MPKFDNATEVGRAKNRRVEIAIVRK 237



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN   K     
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +         +  + +   + +T++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVVQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSNLEKEIKKSGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|159185884|ref|NP_356875.2| hypothetical protein Atu3746 [Agrobacterium tumefaciens str. C58]
 gi|159141018|gb|AAK89660.2| flagellar motor protein [Agrobacterium tumefaciens str. C58]
          Length = 261

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 15/251 (5%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              ++ +   + + +                  +Q +    +  +     + +       
Sbjct: 12  ENERSRLQSLLDAGSGNNASANARIGSLTGELDEQRQANSRASAQIELLNQQIAALRAQI 71

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S+           +  ++      +RL     +    L+   +D   +     + R  I
Sbjct: 72  ASVEAALQASEAKDTSSQVKIADLGRRLNVALAQRVQELNRYRSDFFGRLREILSDRENI 131

Query: 225 LI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDA 274
            I       ++  +F    +   PE    + K+   L        A    V+ + GHTD 
Sbjct: 132 RIVGDRFVFQSEVLFPSGGNDLNPEGQAEMAKLATALLDLAKEIPAEINWVLRVDGHTDN 191

Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
                    RDNW LS  RA S  + L+  GV  +R+    GF  ++     D   +   
Sbjct: 192 VQLTGSGRYRDNWELSSARATSVVKFLISKGVPANRLVAA-GFGEYQPIAEGDSPEARQQ 250

Query: 331 NRRIDILVEDR 341
           NRRI++ + +R
Sbjct: 251 NRRIELKLTER 261


>gi|327187194|dbj|BAK08932.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
           [Bacillus pseudofirmus]
          Length = 252

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q     +   +  +  +    + + E    +    F  P  +             D+ 
Sbjct: 40  DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L  + +   +       G+++ + ++    +F+ + +  L      L+K+G
Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            +L+    ++ + GHTD+ P  N     NW LS  RA S  + L++ + +   R    +G
Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   R  + +  +     NRR+ I++ D 
Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244



 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W + ++D MT+++ FF++++ ++  D    +AI + F       
Sbjct: 1   MKRRRRQQEK--GAPKWMVAFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              S   F+  +  E   +            + S   ++      ++ Q           
Sbjct: 59  FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              +   +  +    E+        +L  S       
Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154


>gi|260842477|ref|YP_003220255.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
 gi|257757624|dbj|BAI29121.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
          Length = 261

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPKSAGNRRIEIMVLTK 225


>gi|37525779|ref|NP_929123.1| flagellar motor protein MotB [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785208|emb|CAE14143.1| chemotaxis protein [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 333

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 3/165 (1%)

Query: 181 EKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           E + A    ++L  L +++    ++      +   +L +    G+ I IID+ N PMF  
Sbjct: 102 EVVEANDEARKLNRLREQLDQLIITDPRLKALRPHLLIDMMDEGLRIQIIDRENRPMFMV 161

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297
            S+        +L+ I  +L      IS+ GHTD   + N      NW LS DRA ++ +
Sbjct: 162 GSAKVESYMSDILRAIAPILNDIPNKISLSGHTDDLKYANGERGYSNWELSADRANASRR 221

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  G+ E +I ++ G A        D     NRRI ILV ++Q
Sbjct: 222 ELLIGGLDEVKILRVVGMASTVRLKQEDASAPVNRRISILVLNKQ 266



 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 46/95 (48%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  +  +I  K+   +   ++ GSWKI YADFMT +MAFFLVMW++  +       I +Y
Sbjct: 2   KTRNVSVIRVKRRKRNGIKHHGGSWKIAYADFMTAMMAFFLVMWLLAISSPQELTRIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           F    +  +   +   D  NP     ++ +    D
Sbjct: 62  FRTPLQVAINKGERSSDSSNPIPGGGEDVLHQEGD 96


>gi|288957797|ref|YP_003448138.1| chemotaxis protein [Azospirillum sp. B510]
 gi|288910105|dbj|BAI71594.1| chemotaxis protein [Azospirillum sp. B510]
          Length = 464

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 86/301 (28%), Gaps = 13/301 (4%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
                 +  ++A+            +    +         + +      I     +  + 
Sbjct: 165 SATQLTERQRQALLSELGATRDRAKSLESELASATEKTMLAQKEIDKRDIRLKALETQLT 224

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
                  +    + L       S + +      S  +     + L    D    I     
Sbjct: 225 DNRMQAQKDLDQRDLRIRDLMASLTGEQAAGTRSKQQIDLLNQQLLALRDQLARIGAALE 284

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIID 230
                 + +K+   +   RL          L+   ++   +       R  + I      
Sbjct: 285 ASEKASADQKVQIAELGARLNQALAAKVQDLARYKSEFFGRVREALGNRPDVRIVGDRFV 344

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR 282
            ++  +F   S+         L  +   L             V+ + GHTD  P R    
Sbjct: 345 FQSELLFPSGSATLEEAGKQRLADLARTLIEIGKVIPPDINWVLRVDGHTDIKPVRFQFS 404

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            NW LS  RA S  + L+  G+  +R++  + F   +           + NRRI+I ++ 
Sbjct: 405 SNWELSSARALSVVKFLIDQGIPAERLAAAA-FGEFQPIDPGTSDEALAKNRRIEIKLDQ 463

Query: 341 R 341
           R
Sbjct: 464 R 464


>gi|4580974|gb|AAD24561.1|AF117969_1 OprF [Pseudomonas fluorescens]
          Length = 326

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 9/283 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 45  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD      +        + N      +     
Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +K GV+  RI+ + G+   R    +        NRR++  VE 
Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323


>gi|19704600|ref|NP_604162.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714896|gb|AAL95461.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 202

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A               ++I++        F   S+         L  I + L
Sbjct: 64  DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANITSGFYSALNGIAQSL 120

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD +        N  LS  RA +  Q L+  GVS +RI   +GF   
Sbjct: 121 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSNRIVA-NGFGSS 176

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRR++I +   Q
Sbjct: 177 NPIASNSTPEGRLQNRRVEIKILPAQ 202


>gi|229591826|ref|YP_002873945.1| flagellar motor protein MotD [Pseudomonas fluorescens SBW25]
 gi|229363692|emb|CAY51066.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
          Length = 297

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 10/203 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 +  D+++        +            +    +           L+ +A  IS
Sbjct: 52  SQALIGVFNDADRALKPIPIGEERPKTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDIS 111

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +    L++ N    +        + I +    ++ +F  + ++P  +   ++ K+  +L 
Sbjct: 112 AAFGDLISSN---QMTVRGNELWVEIELN---SSLLFASADAMPSDQAFTIIDKVASILR 165

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                I + G TD  P        NW LS  RA S  ++L   GV+  R++ + G+   +
Sbjct: 166 PFENPIHVEGFTDNFPINTAQYPTNWELSSARAASIVRMLAMQGVNPGRLASV-GYGEFQ 224

Query: 320 LKIASDP--MNSANRRIDILVED 340
               +      + NRR+ ++V  
Sbjct: 225 PVANNATVEGRARNRRVVLVVSR 247



 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           + ++    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I Q       + 
Sbjct: 3   VSRRRREPEEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISQALIGVFNDA 62

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             A K       P     +    ++  + +  +S +   G        + + ++I     
Sbjct: 63  DRALK-------PIPIGEERPKTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDISAAFG 115

Query: 137 S 137
            
Sbjct: 116 D 116


>gi|256020246|ref|ZP_05434111.1| hypothetical protein ShiD9_15115 [Shigella sp. D9]
 gi|332281408|ref|ZP_08393821.1| flagellar motor region [Shigella sp. D9]
 gi|332103760|gb|EGJ07106.1| flagellar motor region [Shigella sp. D9]
          Length = 307

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +                              +L+ +      P+FD  
Sbjct: 156 VLIKDDQNRNMFE------------------RGSAQIMPFFKMLLVEL-----APVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271


>gi|323963541|gb|EGB59099.1| OmpA family protein [Escherichia coli H489]
 gi|323972411|gb|EGB67618.1| OmpA family protein [Escherichia coli TA007]
          Length = 261

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   DNW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225


>gi|322832491|ref|YP_004212518.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
 gi|321167692|gb|ADW73391.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
          Length = 367

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 3/194 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209
             +  D              ++  +  + + +  + +    LQ L +K+   L+      
Sbjct: 74  GPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQKLEDMLASDPRLK 133

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++   ++   T  G+ I IID +N PMF   S+I  P    +L+ I  VL      IS+ 
Sbjct: 134 DLRPHLMINLTEQGLRIQIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFPNKISLA 193

Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P+        NW LS +RA ++ + +M  G+SE ++ ++ G             
Sbjct: 194 GHTDDMPYATGERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSSMQLKNHPAG 253

Query: 328 NSANRRIDILVEDR 341
           ++ NRRI ILV ++
Sbjct: 254 DAINRRISILVLNK 267



 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 57/129 (44%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
             ++   ++++KK       ++ GSWKI YADFMT +MAFFLVMW+I+ +       I +
Sbjct: 2   KHQSHPIVVVRKKKNKHGGGHHGGSWKIAYADFMTAMMAFFLVMWLISISSPKELVQIAE 61

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF       +T      D  +P     ++      + H  + S       ++  ++ Q+ 
Sbjct: 62  YFRTPLAVAITGGPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQK 121

Query: 128 ENNIFYLSN 136
             ++     
Sbjct: 122 LEDMLASDP 130


>gi|167463460|ref|ZP_02328549.1| flagellar motor protein MotB [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 11/194 (5%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             +   S       +           + +  A   +++ ++L   + +  + +  +++  
Sbjct: 69  SMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEA 128

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +    +  G+ +++ D     +FD   +   PE   VL K+  +       ISI GHTD
Sbjct: 129 QIAVGNSERGVSVTLKD---LFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTD 185

Query: 274 ASPF--RNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKIASDP-- 326
             P    +  +DNW LS  R+ S  +         +S+ +    +G+A       +D   
Sbjct: 186 NIPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMS-TGYADTIPVAPNDSME 244

Query: 327 MNSANRRIDILVED 340
             + NRR++I++  
Sbjct: 245 NRAKNRRVEIVILR 258


>gi|168186129|ref|ZP_02620764.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
 gi|169295847|gb|EDS77980.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
          Length = 242

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 8/151 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +           +N+   V  +    G+++ + +     +FD   +     +  +L KI
Sbjct: 92  EEMYRKVKDFTGKNNLDGTVQVKKDARGVILELKEN---ILFDSGQADIKSSSKEILDKI 148

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKIS 313
            E++      + I GHTD  P  N     NW LS  RA +  +   +  G   +++    
Sbjct: 149 SELIKSVPNGVVIEGHTDNVPIHNSKYDSNWELSTQRAVNVLKYFVVNKGEKPEKLQAA- 207

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+  +     +D     + NRR++IL+   +
Sbjct: 208 GYGEYHPIAKNDTYADRAKNRRVNILITVDE 238



 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  I         W   YAD +T+L+ FF++++  ++ D    K +   F        +
Sbjct: 3   RRKKIQQGEGGGEEWLQTYADTITLLLTFFVLLYASSSIDAVKFKQMSSSFQNVFSGSNS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
            S   F+           +   S      +
Sbjct: 63  NSILDFNASGEAPIVGPPEEMGSKAGSGNE 92


>gi|144898366|emb|CAM75230.1| flagellar motor protein MotB [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 319

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 101/320 (31%), Gaps = 32/320 (10%)

Query: 37  YAD-FMTVLMAF-FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS 94
           + D   T+LM   F+++                 F      +  A  G     +  +   
Sbjct: 17  FVDAMATLLMVLIFVLLV----------------FVLAQFFMGNALTGRDQALSRLQAEM 60

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
            + ++    E      V   +    +K Q    E +    S  ++    + + ++     
Sbjct: 61  ASMVEQLSLERAKSADVKADLTRLQEKLQASLAERDNLLSSLDEERHLSETARSQADLLN 120

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           + +    +  + +    +       ++K       KRL          L    ++   K 
Sbjct: 121 QQMTAMREQLEKLAAALDATEKLSVEQKAQIADLGKRLNVALAGKVEELQRYRSEFFGKL 180

Query: 215 VLFETTRTGILIS----------IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                 R GI I           + D  +  +              ++    ++      
Sbjct: 181 RKVLGERQGIRIEGDRFVFQSELLFDSASADLGVSGEQQVRQLAKTLIDLSKQIPKEVNW 240

Query: 265 VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           V+ + GHTD  P +      NW LS  RA S  + L+ +GV  DR+   +GF        
Sbjct: 241 VLRVDGHTDKRPIKSGRFPSNWELSTARAISVIRTLIDAGVPADRL-AAAGFGEFLPLDN 299

Query: 324 SDPMN--SANRRIDILVEDR 341
           SD     + NRRI+I  + R
Sbjct: 300 SDSEAALAKNRRIEIRFDQR 319


>gi|94969959|ref|YP_592007.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552009|gb|ABF41933.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 263

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 9/225 (4%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
           Y   + +    +    +                   S     +     +  L   S E +
Sbjct: 37  YASSQTDQKRAAKISSAIEQAFEQLGLGTSNPPGNTSRVAPITPEIRASSSLADRSHETL 96

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               +++      + +   L   + + +    V   TT  G++IS+ +      FD  S+
Sbjct: 97  DIGSQRRVTAAQVQTLRGELQAAIPEELTRSDVTLRTTSDGLVISLQE---IGFFDSGSA 153

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY-SAYQVLM 300
              P +I    +I  +L      + + GHTD  P        NW LS  RA     +++ 
Sbjct: 154 KLRPSSISAFGRIASILREKQCTVRVEGHTDPMPIHTAQYASNWELSTARATGIVKRLIQ 213

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           + G++   +S   G+A       +D     + NRR+D+++   QG
Sbjct: 214 EYGINPGDLSAG-GYAEFHPVGPNDTAEGRAQNRRVDLVILSMQG 257



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +      T  N   W + YADF+T+L AFF+V++  + TD      I        + L  
Sbjct: 4   RPTRQRRTRANNERWLVSYADFITLLFAFFVVLYASSQTDQKRAAKISSAIEQAFEQLGL 63

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +       +     +      S     +  ++D+         Q Q L   +      +
Sbjct: 64  GTSNPPGNTSRVAPITPEIRASSSLADRSHETLDIGSQRRVTAAQVQTLRGELQAAIPEE 123


>gi|303239756|ref|ZP_07326280.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
 gi|302592693|gb|EFL62417.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
          Length = 277

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 97/324 (29%), Gaps = 80/324 (24%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
             +    +   +W + Y+D    +M   L ++I+                   K      
Sbjct: 4   KKVHHEEHADETWLLPYSD----MMTLLLALFIV--------------MFAMSKTDNAKM 45

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K + ++ +         ++   +  I     +  +G++                      
Sbjct: 46  KEMSEQFSIVFSGGAGMMEGDGNSVIPLVKNESSVGTSE--------------------- 84

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                                         EN     +S  K    K  ++++++   I 
Sbjct: 85  ------------------------------ENSNDITVSTTKSNETKEDEKMKEIKDNIE 114

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +S    +     +       G+ ISI D     +F+   +    E   +L K+  ++ 
Sbjct: 115 KEISE---EGYSNNIKLVLDSEGLEISIQD---VVLFNTGEADIKKEVYPLLLKLTGIIK 168

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318
                I + GHTD  P  N   R NW LS  RA +    +   G +  ++   I      
Sbjct: 169 GLNNSIKVVGHTDNVPIHNDKFRSNWDLSSFRAINVMSFMRDQGKLRPEKF-SIQACGEF 227

Query: 319 RLKIASDPM--NSANRRIDILVED 340
           + K  +      + NRR++I +  
Sbjct: 228 KPKYDNSTEEGRAKNRRVEIYIVR 251


>gi|260853484|ref|YP_003227375.1| putative lateral flagellar motor protein [Escherichia coli O26:H11
           str. 11368]
 gi|260866430|ref|YP_003232832.1| putative lateral flagellar motor protein [Escherichia coli O111:H-
           str. 11128]
 gi|257752133|dbj|BAI23635.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11
           str. 11368]
 gi|257762786|dbj|BAI34281.1| predicted lateral flagellar motor protein [Escherichia coli O111:H-
           str. 11128]
 gi|323158085|gb|EFZ44184.1| lateral flagellar motor protein B [Escherichia coli EPECa14]
 gi|323178474|gb|EFZ64052.1| lateral flagellar motor protein B [Escherichia coli 1180]
          Length = 307

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271


>gi|153940977|ref|YP_001391952.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
 gi|152936873|gb|ABS42371.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
 gi|295319971|gb|ADG00349.1| chemotaxis motB protein [Clostridium botulinum F str. 230613]
          Length = 247

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241


>gi|641920|gb|AAA85840.1| protein F precursor [Pseudomonas fluorescens]
          Length = 317

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +A      + + GHTD+         N +LS  RA + 
Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            QVL+K GV+  RI+ + G+   R    +        NRR++
Sbjct: 275 KQVLVKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVE 315


>gi|315127968|ref|YP_004069971.1| lipoprotein [Pseudoalteromonas sp. SM9913]
 gi|315016482|gb|ADT69820.1| lipoprotein [Pseudoalteromonas sp. SM9913]
          Length = 210

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 11/151 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +    +    GV        + + +        F    S         L  I 
Sbjct: 67  DYMDKQEAAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFHDTLNAIA 123

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V+       +S+ GHTD++        N  LS  RA S    L+   +   R+S  SG+
Sbjct: 124 SVMNKYEKTYLSVEGHTDST---GKDSYNMTLSEQRAQSVKNYLVNQQIMAARVST-SGY 179

Query: 316 AHHRLKIASDPM--NSANRRIDI-LVEDRQG 343
              R    +D     + NRR++I +V + QG
Sbjct: 180 GESRPIATNDTANGRAQNRRVEIQIVPNTQG 210


>gi|229592015|ref|YP_002874134.1| putative outer membrane porin A protein [Pseudomonas fluorescens
           SBW25]
 gi|229363881|emb|CAY51363.1| putative outer membrane porin A protein [Pseudomonas fluorescens
           SBW25]
          Length = 326

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 9/283 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 45  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD      +        + N      +     
Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +K GV+  RI+ + G+   R    +        NRR++  VE 
Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323


>gi|87201185|ref|YP_498442.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
 gi|87136866|gb|ABD27608.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
          Length = 230

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +  L       GV    T  G  I +++  N   FD  SS   P     L ++ + L
Sbjct: 79  DKQIRELREQTAGTGVDVTETDNGQAI-LVNLPNGVTFDVDSSTVKPAFATTLDRVAQSL 137

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I + GHTD++        N  LS  RA +    L+  GV   RI    GF   
Sbjct: 138 VQYPNSLIDVYGHTDST---GSDAYNQALSERRARAVADYLISRGVGYARIRS-QGFGES 193

Query: 319 RLKIASDPM--NSANRRIDILV 338
           +   ++D      ANRR++I +
Sbjct: 194 QPIASNDTEQGRQANRRVEIKI 215


>gi|269959951|ref|ZP_06174328.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835250|gb|EEZ89332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 326

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 207 EEYGTGTFEFDSATLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 263

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA S    L+ +G+  DR   + G         +        NRR++++V
Sbjct: 264 ERRAQSVADYLIAAGIDADRF-TVKGMGEENPVADNSTHEGREKNRRVEVVV 314


>gi|153833224|ref|ZP_01985891.1| outer membrane protein OmpA [Vibrio harveyi HY01]
 gi|148870495|gb|EDL69410.1| outer membrane protein OmpA [Vibrio harveyi HY01]
          Length = 326

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  +  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 207 EEYGSGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 263

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA +    L+ +G+  DR   ++G         +        NRR++++V
Sbjct: 264 ERRAQAVADYLIAAGIDADRF-TVTGMGEENPVADNSTHEGREQNRRVEVVV 314


>gi|293605836|ref|ZP_06688207.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
 gi|292815749|gb|EFF74859.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
          Length = 361

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 96/290 (33%), Gaps = 7/290 (2%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
            +    +  ++A  +       +    SK    ++       +     + +  ++   + 
Sbjct: 7   SLAQRIEQARQAQLRAQKAADNSGWRPSKSDRKDRYARWHVDETPEQDAENWLLSYLDLI 66

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
             + +           +     ++ +  E           K        D          
Sbjct: 67  TLLLAMLVVMLAVSRLHGQATQASDKPIELVGTLAAAGLPKYDGEYSEFDAVSIPASWAE 126

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
              PP   E           +      + +   L   ++ K V        +   I    
Sbjct: 127 PPPPPAVAEAAAVEDGVTVAEAAPPLKAPSKESLGLGDLAKSVDVIINEQSVSFRI---S 183

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
           N  +F    +   P  + V++++  +L  +   +S+ GH+D  P +      NW LS  R
Sbjct: 184 NELLFPSGQATLSPSGLDVIKRLAGILNKNAYQVSVEGHSDPVPIQTRQFASNWELSSSR 243

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A S  + L+  GV+ +R+  + G+A  R    +D     +ANRR++++++
Sbjct: 244 ATSVLRELVHDGVAPERLRAV-GYAETRPIETNDTPAGRAANRRVELIMD 292


>gi|262197216|ref|YP_003268425.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262080563|gb|ACY16532.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 374

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 17/258 (6%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
             +   +  D    K + + K G  ++        +    +  S              ++
Sbjct: 124 DSDGDGIFDDRDACKGAPEDKDGFEDEDGCPDLDNDQDGIVDASDACPLEPEDKDGLDDE 183

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-------DLAKKISSTLSGL 206
                +  D +   + ++     P  K+                   +    +    S  
Sbjct: 184 DGCPEEDRDGDMIADNKDQCPDEPEDKDGFADEDGCPDCDNDGDGVPECPVVVDQCPSKA 243

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265
                   V      T   I I   + T  F+   +   P +  +L ++  VL  + E+ 
Sbjct: 244 AKTPDGCPVYNLVKVTSKKIEI---KQTIYFETGKNTIKPVSFALLNEVATVLTDNPEIE 300

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + I GHTD+      A  N  LS  RA S    L+  GV  DR+    G+        ++
Sbjct: 301 VRIEGHTDSR---GSAEFNMELSQSRAESVRSFLIDKGVDGDRLEA-KGYGESAPIANNN 356

Query: 326 PMN--SANRRIDILVEDR 341
                + NRR++ ++  R
Sbjct: 357 TRAGQAQNRRVEFVIVSR 374


>gi|229522162|ref|ZP_04411579.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
 gi|229341087|gb|EEO06092.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
          Length = 321

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P T+  L KI   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RIS   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312


>gi|170754769|ref|YP_001781838.1| chemotaxis MotB protein [Clostridium botulinum B1 str. Okra]
 gi|169119981|gb|ACA43817.1| putative chemotaxis MotB protein [Clostridium botulinum B1 str.
           Okra]
          Length = 254

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 11/162 (6%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            +M    +++++  K+   +           V       G+ I I D     +F+   + 
Sbjct: 83  DSMTEDIKMKEIKSKLEKEIEKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAE 136

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK- 301
            L ++  +L +I ++L      I + GHTD  P  N   R NW LS  RA +    L   
Sbjct: 137 VLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNI 196

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            G+S +++  I  +  +  K  +      + NRR++I +  +
Sbjct: 197 GGISANKL-SIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN   K     
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +         +  + +   + +T++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVLQEGGGGGASVGKAGVSIVPSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|330964668|gb|EGH64928.1| flagellar motor protein MotD [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 295

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  RA S  ++L   G++  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARAASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  + +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|330014716|ref|ZP_08307964.1| OmpA family protein [Klebsiella sp. MS 92-3]
 gi|328532776|gb|EGF59559.1| OmpA family protein [Klebsiella sp. MS 92-3]
          Length = 568

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 20/299 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+W +         ++             +           +       D S        
Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESGTGDASALPEFILP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T + + ++         + +       N+       G D+ +   +     +
Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222
            +   +  L ++  L    A         L       +   + + I   V          
Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYRGEQIRLPLLEAIRGYVPPPPPPRPVQ 424

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            +  ++I   +  +FD    +  P +   L      +       I + GHTD+       
Sbjct: 425 RVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + N  LSL RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540


>gi|288935830|ref|YP_003439889.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
 gi|288890539|gb|ADC58857.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
          Length = 568

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 20/299 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+W +         ++             +           +    +  D S        
Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESDTGDASALPEFILP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T + + ++         + +       N+       G D+ +   +     +
Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222
            +   +  L ++  L    A         L       +   + + I   V          
Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            +   +I   +  +FD    +  P +   L      +       I + GHTD+       
Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + N  LSL RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540


>gi|148380609|ref|YP_001255150.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
 gi|153936730|ref|YP_001388364.1| chemotaxis motB protein [Clostridium botulinum A str. Hall]
 gi|148290093|emb|CAL84212.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152932644|gb|ABS38143.1| chemotaxis protein MotB [Clostridium botulinum A str. Hall]
          Length = 247

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241


>gi|114799250|ref|YP_759621.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444]
 gi|114739424|gb|ABI77549.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444]
          Length = 226

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 69/173 (39%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S             K    A    + +   A+ ++            + V   +  TG+ 
Sbjct: 50  SKEDRAVIASEFTGKPVSTAFHSDQAVSGAAELLALLRQSEGLKAAGESVQLSSDATGVR 109

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I ++D    P+F+  S     +   ++Q     L+     +SI GHTDA      A  NW
Sbjct: 110 IELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFSMTGAASSNW 169

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LS  RA  A + L  +G   DR+  ++G+A  R   A  P  +ANRRI + V
Sbjct: 170 ELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQV 222



 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 43/160 (26%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
           G+WK+ YADF+T L+AFF++MW+++    + +  I   F     +    S          
Sbjct: 23  GTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAAEL 82

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
               +    L       + S D             R        + +        +    
Sbjct: 83  LALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMS 142

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                          + +             +     R+ 
Sbjct: 143 LSGLPYALSIEGHTDAFSMTGAASSNWELSSQRANEARRA 182


>gi|15895120|ref|NP_348469.1| flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
 gi|15024821|gb|AAK79809.1|AE007693_7 Flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
 gi|325509259|gb|ADZ20895.1| Flagellar motor protein MotB [Clostridium acetobutylicum EA 2018]
          Length = 254

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 11/179 (6%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           ++  +         E   +   +  + ++ K I   ++    +     +  + T  G+ I
Sbjct: 74  VSSMKESTPSNAQSESNNSKIEQDMMNEIKKNIDQKVAE---NGYTDKIKSKITEEGLAI 130

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285
           SI D     +F    S  L     +L +I +++      I + GHTD  P        NW
Sbjct: 131 SIQD---IILFRSGDSTVLANIQPMLIEISKMIHSLDNNIKVTGHTDNIPIATETFHSNW 187

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            LS  RA +  + ++   GV E R   I  +  +  +  +      + NRR++I +  +
Sbjct: 188 ELSASRALNVMKFMVTSGGVDEKRF-SIQAYGEYSPEETNSTEQGRARNRRVEIFILRK 245



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 45/142 (31%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
             +W I YAD +T+L+A F+VM+ ++  D+   + + Q F+    +              
Sbjct: 14  DETWLIPYADMLTLLLALFIVMFAMSKVDNKKLQKMSQEFSAIFSSGKGVLVESGTGNGV 73

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                ++    +  E          +    +    +  EN       S+ +E       +
Sbjct: 74  VSSMKESTPSNAQSESNNSKIEQDMMNEIKKNIDQKVAENGYTDKIKSKITEEGLAISIQ 133

Query: 150 DSEKGKDLCKSTDLEKSINKEE 171
           D    +    +          E
Sbjct: 134 DIILFRSGDSTVLANIQPMLIE 155


>gi|310817591|ref|YP_003949949.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390663|gb|ADO68122.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
          Length = 632

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 21/268 (7%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +    + G    Q  P++      D          +   +              +    
Sbjct: 370 ADKCPQTPGAASAQGCPDQDGDGIQDSEDKCPAAAGNAAGQGCPDKDGDGIDDASDRCPA 429

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +   + + C               K  D +  ++++++        E      +     
Sbjct: 430 EAGPAERQGCPI-------------KDADNDGVLDEQDSCPNEAGLPELKGCPAKDADND 476

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA  + +  +     +       +     I    I+ +    FD ++S     +  +L 
Sbjct: 477 TLADHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLD 536

Query: 254 KIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           ++ ++L    E++S+   GHTD       A  N  LS  RA +    L+K GV+ +R+  
Sbjct: 537 QMAKLLNEHPEIVSVLIEGHTDDR---GAADYNRTLSKQRADTVRDYLVKKGVAAERLET 593

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDIL 337
             G+   R    +        NRR+D L
Sbjct: 594 -QGYGPDRPVQPNTTAAGRTANRRVDFL 620


>gi|294678012|ref|YP_003578627.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
 gi|294476832|gb|ADE86220.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
          Length = 224

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 10/171 (5%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              L K    A+        +  ++      L  D    GV        +++++      
Sbjct: 61  DEKLEKAAAGAIVGGLIGGAIGNQLDKQAQELRRDLDTNGVSVVRQGNQLIVTMPQD--- 117

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   S+   P+    L  +   L    +    + GHTD+      A  N RLS DRA 
Sbjct: 118 VLFAVDSAAVRPDLQRDLYTLSGSLNRYPDTTVDVVGHTDSD---GDAAYNQRLSQDRAN 174

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +  ++L+ +GV   R+    G    +   ++      + NRR++ ++   +
Sbjct: 175 AVARILIGAGVPSYRVVAY-GRGEEQPVASNLSAAGKAQNRRVEFIIRPNR 224


>gi|152969879|ref|YP_001334988.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954728|gb|ABR76758.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 568

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 20/299 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+W +         ++             +           +    +  D S        
Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESDTGDASALPEFILP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T + + ++         + +       N+       G D+ +   +     +
Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222
            +   +  L ++  L    A         L       +   + + I   V          
Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYRGEQIRLPLLEAIRGYVPPPPPPRPVQ 424

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            +  ++I   +  +FD    +  P +   L      +       I + GHTD+       
Sbjct: 425 RVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSV---GEE 481

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + N  LSL RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540


>gi|332283607|ref|YP_004415518.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
 gi|330427560|gb|AEC18894.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
          Length = 443

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 4/110 (3%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291
              +F   S     E I VL ++ + L  S   I + G++D  P R      NW LS  R
Sbjct: 317 GDGLFTSGSDELRSEYIPVLSRVADALNQSRGSILVSGYSDNVPIRTVRFPSNWELSQAR 376

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A +   +L       +R+ +  G         ++     + NRR++I + 
Sbjct: 377 ADAVKALLQDRLTQPERV-RAEGRGDANPVAPNNTPANRARNRRVEITLL 425


>gi|297583574|ref|YP_003699354.1| OmpA/MotB domain-containing protein [Bacillus selenitireducens
           MLS10]
 gi|297142031|gb|ADH98788.1| OmpA/MotB domain protein [Bacillus selenitireducens MLS10]
          Length = 256

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 83/191 (43%), Gaps = 11/191 (5%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
                + D +   +  +    P  S  ++  ++  ++L DL ++++  +     +++ + 
Sbjct: 65  PFENPAEDRDVRDDPFDADVDPFESHMEMDEVEMSEQLDDLLEEVNEFIED---NDLTEN 121

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +       G+++ + +Q    +F+ + +  LP+    L+K+G ++     ++ + GHTD+
Sbjct: 122 ISATRDDRGVVLVLQEQ---ALFETARAEILPQAEPFLEKVGTLVTTVPNMVKVEGHTDS 178

Query: 275 SPFRN-IARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMN--SA 330
            P        NW LS  RA S  +  L    V E R   + G+   R    +   +    
Sbjct: 179 RPINTVQFPSNWELSGARASSVIRFILSNFDVDERRFLAV-GYGETRPVAPNTTPDNLQQ 237

Query: 331 NRRIDILVEDR 341
           NRR+ I++ D 
Sbjct: 238 NRRVVIVISDP 248



 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 4/160 (2%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P     W + ++D MT+++ FF++++ ++  D +  +AI + F          S
Sbjct: 3   RKKKQGPKGAPKWMVTFSDLMTLILVFFILLFSMSVVDANRFEAIAESFQERAIFDFYPS 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
              F+          +  D  +D   +   +D         +Q   L   +         
Sbjct: 63  LIPFENPAEDRDVRDDPFDADVDPFESHMEMD----EVEMSEQLDDLLEEVNEFIEDNDL 118

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
               ++   D      L +    E +  +      P L K
Sbjct: 119 TENISATRDDRGVVLVLQEQALFETARAEILPQAEPFLEK 158


>gi|239781764|pdb|2ZOV|A Chain A, Structure Of The Periplasmic Domain Of Motb From
           Salmonella (Crystal Form I)
          Length = 210

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILIS 227
           +++       + +++     + RL  L   +   +        +   +  +  + G+ I 
Sbjct: 6   QQQGEVEKQPNIDELKKRXEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQ 65

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNW 285
           IID +N P F   S+   P    +L+ I  VL      IS+ GHTD  P+ N      NW
Sbjct: 66  IIDSQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNW 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            LS DRA ++ + L+  G+   ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 126 ELSADRANASRRELVAGGLDNGKVLRVVGXAATXRLSDRGPDDAINRRISLLVLNKQ 182


>gi|74310872|ref|YP_309292.1| hypothetical protein SSON_0272 [Shigella sonnei Ss046]
 gi|293418347|ref|ZP_06660782.1| chemotaxis protein MotB [Escherichia coli B088]
 gi|73854349|gb|AAZ87056.1| putative motility protein [Shigella sonnei Ss046]
 gi|291324875|gb|EFE64290.1| chemotaxis protein MotB [Escherichia coli B088]
          Length = 261

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225


>gi|77457796|ref|YP_347301.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf0-1]
 gi|77381799|gb|ABA73312.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
          Length = 296

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DS++        +            +    +           L+ +A  IS+    L++ 
Sbjct: 58  DSDRALKPIPIGEERPKTVTPAKPLVKDAEQVDAGIAGASDPLKSIADDISAAFGDLISS 117

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           N    +        + I +    ++ +F    ++P      ++ K+  +L      I + 
Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDIAFNIIDKVAAILKPFDNPIHVE 171

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           G TD  P R      NW LS  R+ S  ++L   GV+  R++ + G+   +    +    
Sbjct: 172 GFTDDQPIRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASV-GYGEFQPVANNATAE 230

Query: 328 -NSANRRIDILVED 340
             + NRR+ ++V  
Sbjct: 231 GRAKNRRVVLVVSR 244



 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K I +       +   A
Sbjct: 3   RRRQHEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKIISEALIGVFTDSDRA 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            K       P     +    ++  + + K++  +  G        + + ++I      
Sbjct: 63  LK-------PIPIGEERPKTVTPAKPLVKDAEQVDAGIAGASDPLKSIADDISAAFGD 113


>gi|194427556|ref|ZP_03060104.1| putative chemotaxis protein [Escherichia coli B171]
 gi|194414326|gb|EDX30600.1| putative chemotaxis protein [Escherichia coli B171]
          Length = 256

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P     L ++ 
Sbjct: 76  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTQLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPKSAGNRRIEIMVLTK 220


>gi|73532502|dbj|BAE19809.1| chemotaxis protein [Edwardsiella tarda]
          Length = 222

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           +R  RL+ L +++    ++      +   ++      G+ I IID +N PMF   S+   
Sbjct: 1   RRAVRLKRLLQRLEQVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVE 60

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303
           P    +L+ I  +L      IS+ GHTD  P+ N      NW LS DRA ++ + L+  G
Sbjct: 61  PYMRNILRAIAPILNELPNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELIAGG 120

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++ ++I ++ G A            + NRRI ILV ++
Sbjct: 121 LAGNKILRVVGMADTMNLRNLAGNAAVNRRISILVLNK 158


>gi|91209318|ref|YP_539304.1| hypothetical protein UTI89_C0270 [Escherichia coli UTI89]
 gi|91070892|gb|ABE05773.1| putative motility protein MbhA [Escherichia coli UTI89]
          Length = 262

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 22  AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 82  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            VL      I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 142 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 201

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226


>gi|187778759|ref|ZP_02995232.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
           15579]
 gi|187772384|gb|EDU36186.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
           15579]
          Length = 251

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 79/206 (38%), Gaps = 8/206 (3%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K      + +     +S +     N +           K+          D  +  +
Sbjct: 44  DAQKFQQVASAMQVAMTGQSGNTIVDYNLKNGDVPLVGETTKLGRETGSDAKSDSKEVYN 103

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                +  +N+   V  +    G++I + D     +F+   +   P++  ++ KI  ++A
Sbjct: 104 EVNKFVDKNNLKSSVEVKEDGRGVIIQLRDN---VLFEIGRADIKPQSKQIMDKINGLIA 160

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
                + + GHTD  P +N     NW LS  RA +  +  ++    +  R +   G+  +
Sbjct: 161 TLPNEVIVEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAA-GYGEY 219

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
           R    ++     + NRR++I++  ++
Sbjct: 220 RPIAQNNSDVNKAKNRRVNIVIVSKE 245


>gi|218557186|ref|YP_002390099.1| hypothetical protein ECS88_0265 [Escherichia coli S88]
 gi|218363955|emb|CAR01620.1| flagellar system protein [Escherichia coli S88]
          Length = 296

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 56  AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            VL      I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 176 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 235

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260


>gi|311106778|ref|YP_003979631.1| motility protein B 2 [Achromobacter xylosoxidans A8]
 gi|310761467|gb|ADP16916.1| motility protein B 2 [Achromobacter xylosoxidans A8]
          Length = 320

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 7/193 (3%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D E  +          +  +     +   +     A + +   +      + +   L   
Sbjct: 109 DGEYSEFDAVQIPASWAQAEAPAVAVAAAAASAQPAQEGEVVAEAAPPLRAPSKESLGLG 168

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++ K V        +   I    N  +F    +   P  + V++++  +L  +   +S+ 
Sbjct: 169 DLGKSVDVIINEQSVSFRI---SNELLFPSGQATLSPTGLDVIKRLAAILNKNEYQVSVE 225

Query: 270 GHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326
           GH+D  P +      NW LS  RA S  + L++ GVS  R+  + G+A  R   ++D   
Sbjct: 226 GHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVSAQRLRAV-GYAETRPIESNDTQA 284

Query: 327 MNSANRRIDILVE 339
             +ANRR++++++
Sbjct: 285 GRAANRRVELIMD 297


>gi|193063256|ref|ZP_03044347.1| putative chemotaxis protein [Escherichia coli E22]
 gi|192931164|gb|EDV83767.1| putative chemotaxis protein [Escherichia coli E22]
 gi|323160305|gb|EFZ46258.1| lateral flagellar motor protein B [Escherichia coli E128010]
          Length = 256

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPKSAGNRRIEIMVLTK 220


>gi|292490769|ref|YP_003526208.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291579364|gb|ADE13821.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 301

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 18/249 (7%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
                   D       T        G            +N        Q       +  +
Sbjct: 64  SNPFIPDSDNDGVPDDTDQCPGTPEGVEVDTVGCPLDNDNDGVPDYLDQCPDTPVGVAVN 123

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE          +   +++       P +   +        L      ++  +       
Sbjct: 124 SEGCPLDSDGDGVPDYLDQC------PDTPPGVAVNSEGCPLDSDGDGVTDDVDQCPDTP 177

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
               V        +++          F   S+   PE   +L +  + L    +  ++I 
Sbjct: 178 AGVEVDEVGCPEPVVLE-----GGVHFAFDSAKLTPEARDILDETADSLRTHPDLEVTIE 232

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD+      A  N RLS  RA +A   L+  GV + R+  + G+   +   ++     
Sbjct: 233 GHTDSV---GNADYNKRLSQLRAEAAMNYLVSQGVDQSRLEAV-GYGEAQPIASNKTKEG 288

Query: 328 NSANRRIDI 336
            + NRR+++
Sbjct: 289 RAQNRRVEL 297


>gi|183179549|ref|ZP_02957760.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
 gi|183012960|gb|EDT88260.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
          Length = 321

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           S   + +V     +     T    + ++        ++  F  +S+   P T+  L KI 
Sbjct: 172 SEEPAPVVEQRPAEPAPVATPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIV 231

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    +  + + GHTD++        N +LS  RA +  + L   G+   RIS   G 
Sbjct: 232 GYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERRAQAVAKALEAQGIDASRISA-KGL 287

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                  ++        NRR+++++
Sbjct: 288 GESSPIASNATAEGREKNRRVELVI 312


>gi|298372486|ref|ZP_06982476.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275390|gb|EFI16941.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 567

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ + +    E+   L K  + L  +    I+I GHTD+         N +LS  RA S 
Sbjct: 466 FNTNDTSLTAESNKELDKQAKFLKENPNVNITIVGHTDSR---GSDEYNLKLSEGRAVSV 522

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            + L+  G++ +R+    G    +   +++     + NRRI+I V 
Sbjct: 523 MRALIDRGIAPERLKA-EGRGETQPVASNETEEGRAENRRIEIEVR 567


>gi|138896104|ref|YP_001126557.1| flagellar motor protein MotB [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267617|gb|ABO67812.1| Chemotaxis MotB protein [Geobacillus thermodenitrificans NG80-2]
          Length = 260

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 10/209 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            + +    ++ T  +           +     ++E            ++ K K+ L  + 
Sbjct: 47  QKIASSFSSAFTGGNGVLDFPNPVEPITPPAAQDEQGQEREKQPSPAMSQKEKEGLAQVK 106

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +KI   +     + +   +    T  G+ I+I+D     +FD  S+    +   +  ++ 
Sbjct: 107 EKIDVYIQE---NKLGGKLQTSLTEEGLAITILDD---ILFDSGSAEVRMKDRRLASEVA 160

Query: 257 EVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +L  +    + I GHTD  P  N     NW LS+ RA +  +VL+++   + R     G
Sbjct: 161 ALLVMNPPRNVIISGHTDNVPIHNAQFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKG 220

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  ++   +++       NRR++IL+  R
Sbjct: 221 YGEYKPIASNETAAGRMKNRRVEILILPR 249


>gi|326799849|ref|YP_004317668.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326550613|gb|ADZ78998.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 302

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 83/225 (36%), Gaps = 9/225 (4%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            Q++            +Q    K+++            ++    +   +    +   +K 
Sbjct: 52  SQHELTNAKSRVTDLEEQIAQYKSNVNSLQAALDKCLTNSGQGNANIAKLVDEINASNKY 111

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
               +  K +   L   +++ L+  ++   ++ V  +  +  + IS+ D     ++   S
Sbjct: 112 IQHLVNTKAKSDSLNMVLTNNLTRSLSREEMQDVDVQVLKGVVYISLSDNM---LYKSGS 168

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299
               P     L KI +++    E  + I G+TD  P      R+NW LS  RA S  Q L
Sbjct: 169 YEISPAAGETLGKIAKIIMDYKEYEVLIEGNTDNVPISQKNIRNNWDLSALRASSVVQAL 228

Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
               GV   R++   G   +    ++D       NRR  I++  +
Sbjct: 229 QNDYGVDPKRLTAG-GRGEYNPIASNDTEAGRTRNRRTQIIITPK 272


>gi|290509857|ref|ZP_06549228.1| outer membrane protein [Klebsiella sp. 1_1_55]
 gi|289779251|gb|EFD87248.1| outer membrane protein [Klebsiella sp. 1_1_55]
          Length = 568

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 20/299 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+W +         ++             +           +    +  D S        
Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPGESDTEDASALPEFILP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T + + ++         + +       N+       G D+ +   +     +
Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222
            +   +  L ++ +L    A         L       +   + + I   V          
Sbjct: 365 PKASAVRVLREDAVLLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            +   +I   +  +FD    +  P +   L      +       I + GHTD+       
Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + N  LSL RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540


>gi|325982315|ref|YP_004294717.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325531834|gb|ADZ26555.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 277

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 13/226 (5%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K+    L+     L+  +      +      ++     ++   + + +   N  +     
Sbjct: 56  KEAGDILDKADVALNKGENDAKVNHLAYLAKQQVAIAQETAKAKIAESVVANADVERDRI 115

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                    +  +         ++    +   + +  + T  G++I++ D     +F  +
Sbjct: 116 LLEARTAEAEESKQQVAFDQLLIAQQQKEL--EELNAKKTERGLVITLND----VLFRTN 169

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            +      +  +QK+ + L   T+    I GHTD +        N  LS  RA +    L
Sbjct: 170 MAQLEANGVRTVQKLADFLRQYTQHKVLIEGHTDNT---GSHHYNQELSERRANAVKMAL 226

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           + SG+S DR++   G+        +D       NRR++I++ D  G
Sbjct: 227 LNSGISNDRVAS-RGYGETLPIAGNDTAEHRQLNRRVEIILSDENG 271


>gi|254785497|ref|YP_003072926.1| OmpA family protein [Teredinibacter turnerae T7901]
 gi|237684013|gb|ACR11277.1| OmpA family protein [Teredinibacter turnerae T7901]
          Length = 305

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 10/153 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            DL   +++ LS  +       V        + I++  Q    +F   S+ P      + 
Sbjct: 76  DDLLNTLNAVLSQQIG---AGMVTVSGNEDWVEIAVKSQL---LFASGSAAPSTAAQQIF 129

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++ +VLA     I++ GHTD  P RN    +NW LS  RA +   +L  +GV+ +R+  
Sbjct: 130 NELADVLAPFENAIAVSGHTDNVPIRNQQFQNNWELSAARAVAVVNLLAYAGVAPERL-A 188

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +G+   +    ++     +ANRR+ + +   +
Sbjct: 189 ATGYGEFQPVADNNSAQGRAANRRVVLRIARTK 221



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 52/195 (26%), Gaps = 1/195 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK-NLMT 78
           +    +T  N   W + YADF+T+L  FF+VM+ ++   +   + + +  +      + T
Sbjct: 3   RRTPVETKINHERWLVSYADFVTLLFGFFVVMYSVSQVSETKYRTLSETLSGAFSGAVQT 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +            N ++  + + I    V +       +   +         +   
Sbjct: 63  PPTNLPRTALVAPDDLLNTLNAVLSQQIGAGMVTVSGNEDWVEIAVKSQLLFASGSAAPS 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +     +   D     +   +           N       +           L   A  
Sbjct: 123 TAAQQIFNELADVLAPFENAIAVSGHTDNVPIRNQQFQNNWELSAARAVAVVNLLAYAGV 182

Query: 199 ISSTLSGLVADNIVK 213
               L+         
Sbjct: 183 APERLAATGYGEFQP 197


>gi|117622532|ref|YP_851445.1| hypothetical protein APECO1_1739 [Escherichia coli APEC O1]
 gi|237707752|ref|ZP_04538233.1| MbhA protein [Escherichia sp. 3_2_53FAA]
 gi|115511656|gb|ABI99730.1| putative motility protein MbhA [Escherichia coli APEC O1]
 gi|226898962|gb|EEH85221.1| MbhA protein [Escherichia sp. 3_2_53FAA]
 gi|323958690|gb|EGB54391.1| OmpA family protein [Escherichia coli H263]
          Length = 261

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            VL      I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 141 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|85711329|ref|ZP_01042388.1| Outer membrane protein and related
           peptidoglycan-associated(lipo)proteins [Idiomarina
           baltica OS145]
 gi|85694830|gb|EAQ32769.1| Outer membrane protein and related
           peptidoglycan-associated(lipo)proteins [Idiomarina
           baltica OS145]
          Length = 188

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +   +         +    GV        I + +        F   S+        VL+
Sbjct: 43  AIGNYMDKQEEAFRDELSGSGVQVIRDGDNIRLQL---PGNITFASESANISQNFYPVLE 99

Query: 254 KIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +  VL       + I GHTD++     A  N +LSL+RA +    L+  GV   R++  
Sbjct: 100 DVAAVLNKYNKTTMMIEGHTDST---GSADYNQQLSLNRANAVRNYLVGYGVDSRRVTT- 155

Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            GF   +    +D       NRR+++ +   Q
Sbjct: 156 QGFGESQPIATNDTAQGRQQNRRVELRIIPNQ 187


>gi|322383007|ref|ZP_08056837.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153030|gb|EFX45490.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 254

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 11/194 (5%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             +   S       +           + +  A   +++ ++L   + +  + +  +++  
Sbjct: 65  SMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEA 124

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +    +  G+ +++ D     +FD   +   PE   VL K+  +       ISI GHTD
Sbjct: 125 QIAVGNSERGVSVTLKD---LFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTD 181

Query: 274 ASPF--RNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKIASDP-- 326
             P    +  +DNW LS  R+ S  +         +S+ +    +G+A       +D   
Sbjct: 182 NIPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMS-TGYADTIPVAPNDSME 240

Query: 327 MNSANRRIDILVED 340
             + NRR++I++  
Sbjct: 241 NRAKNRRVEIVILR 254



 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 2/106 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++    +   N   W + YAD +T+L+AFF++M+ ++  D +  + + Q  +   K   +
Sbjct: 3   RRSKKPEEHVNHERWLVTYADLITLLLAFFVIMYAMSKVDVNKYEVLAQSLSLQFKESNS 62

Query: 79  --ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
             +       QN P +S+  +I     +     + D++      + 
Sbjct: 63  ILSMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQD 108


>gi|77165990|ref|YP_344515.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|76884304|gb|ABA58985.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
          Length = 319

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 28/304 (9%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
             +    AI   F P    + T++    D              +   E           G
Sbjct: 14  MKNKKTMAIMAIFTPLLLAVYTSALAEDDHPLYAPYKGWPPCAVMTGEGDMAPDGRSVTG 73

Query: 117 ----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                      +++       +         +  E      + +      L +  D    
Sbjct: 74  VICRSTLFIPDSDKDGVPDDKDQCPNTPPGVEVDEVGCPLDSDNDGVPDYLDQCPDTPMG 133

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +   E+        + +     +     +  +++S    L  D+   GV  +        
Sbjct: 134 VEVGEDGCPLDSDGDGVPDYLDQCPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPDTA 193

Query: 227 SIIDQRNTPM-----------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +D                 F   S+   P    +L K+ E +    +  I+I GHTD+
Sbjct: 194 YGVDVDEVGCPKPVVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDS 253

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
           +     A  N RLS  RA +A   L   G+   R+  I G+   R   ++      + NR
Sbjct: 254 T---GNADYNQRLSQLRAEAAMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNR 309

Query: 333 RIDI 336
           R+++
Sbjct: 310 RVEL 313


>gi|237742260|ref|ZP_04572741.1| outer membrane protein [Fusobacterium sp. 4_1_13]
 gi|256845531|ref|ZP_05550989.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294785172|ref|ZP_06750460.1| OmpA family protein [Fusobacterium sp. 3_1_27]
 gi|229429908|gb|EEO40120.1| outer membrane protein [Fusobacterium sp. 4_1_13]
 gi|256719090|gb|EEU32645.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294486886|gb|EFG34248.1| OmpA family protein [Fusobacterium sp. 3_1_27]
          Length = 212

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A               ++I++        F   S+         L  I + L
Sbjct: 74  DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 130

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD +        N  LS  RA +  Q L+  GV+ +RI   +GF   
Sbjct: 131 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVASNRIVA-NGFGSS 186

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRR++I +   Q
Sbjct: 187 NPVASNSTQEGRLQNRRVEIKILPAQ 212


>gi|300936146|ref|ZP_07151085.1| OmpA family protein [Escherichia coli MS 21-1]
 gi|300458724|gb|EFK22217.1| OmpA family protein [Escherichia coli MS 21-1]
          Length = 307

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|162450713|ref|YP_001613080.1| ompA family outer membrane protein [Sorangium cellulosum 'So ce
           56']
 gi|161161295|emb|CAN92600.1| omp A family outer membrane protein [Sorangium cellulosum 'So ce
           56']
          Length = 578

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 88/274 (32%), Gaps = 12/274 (4%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
            G     +     D +          I  S       N V      T+       ++   
Sbjct: 306 AGVGTRMSGGYAPDFRGVALVGGSFGIADSDARSPGFNYVITAEKDTDGDGYPDVIDLCP 365

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-KEKILAMKRKK 190
               + +Q +            G  +    D      ++++         E+        
Sbjct: 366 EDPEDGKQPKPSDGCPDMPDRDGDGIPDVVDKCPDDPEDKDGIDDRDGCPEEDADQDGIP 425

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             +D   K    +     +                I I+ Q     F+  SS  LP++  
Sbjct: 426 DAEDKCPKEPGQVVVEDPEKNGCPFYIRRITGSAEIEIMKQVE---FEFDSSRILPQSYP 482

Query: 251 VLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +L ++  +L  + E+   SI GHTD          N RL+ +RA +    L+  GV  +R
Sbjct: 483 ILDEVVRLLKANPEIKLLSIEGHTDNQ---GTIDYNDRLAHNRAIAVRVYLINKGVQSER 539

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           ++ I G+   R  +++D       NRR++  ++ 
Sbjct: 540 LTSI-GYGSRRPLLSNDTPEGRQRNRRVEFHIKS 572


>gi|197106951|ref|YP_002132328.1| OmpA family protein [Phenylobacterium zucineum HLK1]
 gi|196480371|gb|ACG79899.1| OmpA family protein [Phenylobacterium zucineum HLK1]
          Length = 221

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +   + +    +   ++  ++  G     +           N      +   I A     
Sbjct: 13  LAVGACTTTDPYTGQTVRSNTRTGILAGAAGGALLGYLTNTNKSEEGRTNALIGAGVGAL 72

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
               +   +    + L  +    GV  E     I++++        F    S        
Sbjct: 73  AGGAVGAYMDRQQAELRRELAGSGVEVERRGDDIVLNMPSDVT---FGVDQSDVQSRFYP 129

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL  I   L+   +  I + GH D++        N  LS  RA S    L+  GV +DR+
Sbjct: 130 VLDDIAATLSRYPQTLIDVAGHADST---GADAYNQALSERRASSVASYLVSRGVLQDRL 186

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
             + G+   R   ++      + NRR++I V   +G
Sbjct: 187 Y-VVGYGESRPVASNATEQGRAQNRRVEITVRPFRG 221


>gi|238796916|ref|ZP_04640420.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969]
 gi|238719176|gb|EEQ10988.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969]
          Length = 320

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 3/195 (1%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209
            +K                +++  +   +  K+   K  + L+   +K+ + +       
Sbjct: 40  GDKSSVSDSPIPGGGDDLMKQDGEVLKQTLAKMDKQKNAQNLRRAHEKLENLIKKDPRLS 99

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           +    +    T  G+LI IID +  PMF   S    P   ++LQ +  VL      I++ 
Sbjct: 100 DFQSNLRLSLTDDGLLIQIIDSQERPMFKVGSRELEPYMRIILQALVPVLNDLPNKINLT 159

Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD+ P+ N      NW LS DRA ++ + L+  G+++++  ++ G A           
Sbjct: 160 GHTDSLPYVNGEAGYSNWELSSDRANASRRTLVSGGLADNKFLRVIGSADMMNLANVKSD 219

Query: 328 NSANRRIDILVEDRQ 342
              NRRI ILV  + 
Sbjct: 220 APINRRISILVLSKN 234



 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+++++    ++ I  YF    K  M+         +P      + +  
Sbjct: 1   MTAMMAFFLVMWLLSSSTPLQREQIADYFKMPLKLAMSHGDKSSVSDSPIPGGGDDLMKQ 60

Query: 101 SID 103
             +
Sbjct: 61  DGE 63


>gi|237744199|ref|ZP_04574680.1| outer membrane protein [Fusobacterium sp. 7_1]
 gi|256027684|ref|ZP_05441518.1| Outer membrane protein [Fusobacterium sp. D11]
 gi|260494220|ref|ZP_05814351.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
 gi|289765644|ref|ZP_06525022.1| outer membrane protein [Fusobacterium sp. D11]
 gi|229431428|gb|EEO41640.1| outer membrane protein [Fusobacterium sp. 7_1]
 gi|260198366|gb|EEW95882.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
 gi|289717199|gb|EFD81211.1| outer membrane protein [Fusobacterium sp. D11]
          Length = 212

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A         +     ++I++        F   S+         L  I + L
Sbjct: 74  DNQERELKAKLQGTQAQVKKEGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 130

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD +        N  LS  RA +  Q L+  GVS  RI   +GF   
Sbjct: 131 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSSRIIA-NGFGSS 186

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++   +    NRR++I +   Q
Sbjct: 187 NPIASNSTPDGRLQNRRVEIKILPAQ 212


>gi|119357472|ref|YP_912116.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354821|gb|ABL65692.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 229

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D  V+G   E    GI +      +  +F+  SS     +   ++K+  +LA   
Sbjct: 82  QAAEIDRNVEGAEVERIGEGIRVVF---DSGILFNTGSSAITSTSRYNIEKLAGILAKYD 138

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD+         N  LS +RA S   +L   GVS  R+S I G+   R   
Sbjct: 139 DTNLIIEGHTDSV---GSDSMNQTLSENRAQSVANLLKAYGVSSSRLSAI-GYGESRPIA 194

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           +++  +    NRR+++L+    
Sbjct: 195 SNETESGRRLNRRVEVLITANN 216


>gi|238894412|ref|YP_002919146.1| putative outer membrane protein [Klebsiella pneumoniae NTUH-K2044]
 gi|238546728|dbj|BAH63079.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 568

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 20/299 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+W +         ++             +           +    +  D S        
Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPGESDTGDASALPEFILP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T +   ++         + +       N+       G D+ +   +     +
Sbjct: 305 QLPAGRGLTPRGWAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222
            +   +  L ++  L    A         L       +   + + I   V          
Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            +   +I   +  +FD    +  P +   L      +       I + GHTD+       
Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + N  LSL RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540


>gi|113868899|ref|YP_727388.1| outer membrane protein peptidoglycan-associated(lipo)proteins
           [Ralstonia eutropha H16]
 gi|113527675|emb|CAJ94020.1| outer membrane protein peptidoglycan-associated(lipo)proteins
           [Ralstonia eutropha H16]
          Length = 212

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S+   P    VL ++ + L    +V  ++ GHTD++        N +LS  
Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVSANVVGHTDST---GNPNYNMQLSQR 158

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R++   G    +    +      + NRR++I ++  QG
Sbjct: 159 RAQSVAGYLGDRGVARNRLTA-EGRGQSQPVADNGTEAGRAQNRRVEIFLKPIQG 212


>gi|194438259|ref|ZP_03070351.1| putative chemotaxis protein [Escherichia coli 101-1]
 gi|297521341|ref|ZP_06939727.1| hypothetical protein EcolOP_27134 [Escherichia coli OP50]
 gi|194422923|gb|EDX38918.1| putative chemotaxis protein [Escherichia coli 101-1]
          Length = 256

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   DNW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220


>gi|218698824|ref|YP_002406453.1| hypothetical protein ECIAI39_0419 [Escherichia coli IAI39]
 gi|218368810|emb|CAR16558.1| flagellar system protein [Escherichia coli IAI39]
          Length = 261

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L +  
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVEFA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|304393260|ref|ZP_07375188.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
 gi|303294267|gb|EFL88639.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
          Length = 343

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 116/349 (33%), Gaps = 34/349 (9%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           + +    D+ +        + D   T+L+A   +M++++         + Q  +     L
Sbjct: 4   RSRRRGSDSVSYWPG----FVDALSTLLLA---IMFLLSVFVLAQF-LLSQEISGKDTVL 55

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              +  I +           K DL        + +       ++ ++     + +   + 
Sbjct: 56  NRLNSQINELTQLLALEQSAKQDLEDQIATLSSGLSTAESERSRLQELLSSGSGVAEEAE 115

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           ++ S   +          + + +         ++ K+       L   +    +   ++ 
Sbjct: 116 TRASGLSETLDEERKVSRRAMSQVALLNQQISALRKQIASLEDALDVSETRDRESSTKIA 175

Query: 194 DLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           DL ++++  L+  V +            + +L       ++      ++  +F    +  
Sbjct: 176 DLGRRLNVALAQRVQELNRFRSDFFGRLRDILGARDDIRVVGDRFVFQSEVLFPSGGATL 235

Query: 245 LPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYS 294
               +  + K+   L             V+ + GHTD  P        DNW LS  RA S
Sbjct: 236 NEAGLGEMAKLANALIELGEEIPDEIDWVLRVDGHTDNIPLSGSGRYADNWELSSGRATS 295

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             + L+  GV  +R+    GF   +     D   +   NRRI++ + ++
Sbjct: 296 VVKYLITQGVPAERLVAA-GFGEFQPLEDVDTQEARDRNRRIELKLTEK 343


>gi|324115583|gb|EGC09522.1| OmpA family protein [Escherichia coli E1167]
          Length = 261

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225


>gi|209745374|gb|ACI70994.1| putative motility protein [Escherichia coli]
          Length = 261

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|170761206|ref|YP_001787972.1| chemotaxis motB protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169408195|gb|ACA56606.1| chemotaxis protein MotB [Clostridium botulinum A3 str. Loch Maree]
          Length = 247

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241


>gi|294085848|ref|YP_003552608.1| flagellar motor protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665423|gb|ADE40524.1| flagellar motor protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 389

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 21/261 (8%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             D     N     +    ++         I        S+   N     +    ++ + 
Sbjct: 126 QSDTETALNDAQKNLAEREEQLHIVEGTLAIADARAKTDSQTIDNLKAETNASRAEIAQM 185

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-------- 212
           T+   ++  +       L++++  A K K  + +L K +++ L+  V +           
Sbjct: 186 TNALAALKAQLESLQNLLAEKEAQATKDKIAIANLGKSLNNALASRVQELQRFRSEFFGR 245

Query: 213 -KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HST 263
            + +L       I+      ++  +F    +         + K+   LA           
Sbjct: 246 LRDILKGRNDVQIVGDRFVFQSEVLFAPGQADIGDSGREQMTKLAVALAEIAREIPDDIN 305

Query: 264 EVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            V+ + GHTD  P R     DNW LS +RA S  + L+  G+  +R+   +G+  H+  I
Sbjct: 306 WVLQVDGHTDDIPIRAGRYADNWDLSTERALSVVRFLISQGLPPNRL-AATGYGEHQPLI 364

Query: 323 ASDPMNSA--NRRIDILVEDR 341
             +  ++   NRRI++ +  R
Sbjct: 365 NENSEDARQKNRRIELKITQR 385


>gi|260450574|gb|ACX40996.1| OmpA/MotB domain protein [Escherichia coli DH1]
 gi|323943350|gb|EGB39503.1| OmpA family protein [Escherichia coli E482]
          Length = 261

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225


>gi|301643541|ref|ZP_07243583.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|307136895|ref|ZP_07496251.1| hypothetical protein EcolH7_02026 [Escherichia coli H736]
 gi|301078041|gb|EFK92847.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|315616807|gb|EFU97424.1| lateral flagellar motor protein B [Escherichia coli 3431]
          Length = 307

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++     +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271


>gi|163796351|ref|ZP_02190312.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159178493|gb|EDP63035.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 561

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 100/299 (33%), Gaps = 15/299 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           +  T++ T+  + +      K      +   D     + + + +  L+     T+     
Sbjct: 267 LTETNEATRARLAELAEALKKADSRVVRLETDLSEQRDVTKKLEARLAEQTERTR-LAQS 325

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           ++   + + +    E        +++ +    S  +       +         I      
Sbjct: 326 ELEQRDIRLEELFSEQERTQQKLTEEQKISAESSRQVELLNAQIAALRQQLARIEAALEA 385

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQ 231
                  +K+  +   +RL          L+   ++   +     + R  + I       
Sbjct: 386 TETQNRDQKVQILDLGRRLNAALATKVQELARFRSEFFGRLREVLSDRDDVRIVGDRFVF 445

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRNI-AR 282
           ++  +F   S+       V L +    L             ++ + GHTD  P  N   R
Sbjct: 446 QSEVLFGSGSAQIGEPGKVKLGQFAATLREIAPRIPKNIGWILQVEGHTDTVPIHNEQFR 505

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            NW LS  RA S  + L+  G+  +R+S  +G+  ++    +D     NRRI++ +  R
Sbjct: 506 SNWELSAARAISVVKYLVDQGIPAERLSA-TGYGEYQPIDPADLE--RNRRIEMKLTQR 561


>gi|56460671|ref|YP_155952.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Idiomarina loihiensis L2TR]
 gi|56179681|gb|AAV82403.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Idiomarina loihiensis L2TR]
          Length = 208

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +         +    GV        + + +        F   S+        VL  +  
Sbjct: 67  YMDKQEEEFREELADSGVKVIRDGDNLRLQLPSNIT---FATGSANISQSFNPVLDDVAR 123

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +    I GHTD++     A  N +LSL+RA +    L+ +GV   R++   G+ 
Sbjct: 124 VLKKYEKTTMLIEGHTDST---GSAEYNQQLSLNRANAVRNNLVGNGVDSRRVTT-EGYG 179

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                  +D  +    NRR+++ +
Sbjct: 180 ESMPVADNDTESGRQLNRRVELRI 203


>gi|331666564|ref|ZP_08367438.1| putative motility protein [Escherichia coli TA271]
 gi|331065788|gb|EGI37672.1| putative motility protein [Escherichia coli TA271]
          Length = 307

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N +     K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTVLLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKRLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271


>gi|309786020|ref|ZP_07680649.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
 gi|308926131|gb|EFP71609.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
          Length = 307

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------SRDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|293408386|ref|ZP_06652225.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471564|gb|EFF14047.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 307

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDLNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|303248961|ref|ZP_07335208.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489684|gb|EFL49620.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 261

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K +  A++ +++ Q+L     + ++ L  +   + +     R  + I+ +D+    
Sbjct: 50  ADERKAEARAVELERKTQELQTAYDALVADLRGEVDSRDIRVRQFREKLEINFVDK---I 106

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
           +F   S+   P    +L+K+G VLA   +  I + GHTD++P  +     NW LS  R+ 
Sbjct: 107 LFASGSAEITPRGREILRKVGGVLAKVKDKSIYVVGHTDSNPIHSALYPSNWELSTARSA 166

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  + L    GV+ +R + + G A ++   ++        NRR+DI+V
Sbjct: 167 SVIRFLSESGGVTPERFTAM-GRAFYQPVASNATPEGRHENRRVDIIV 213


>gi|237653594|ref|YP_002889908.1| flagellar motor protein MotD [Thauera sp. MZ1T]
 gi|237624841|gb|ACR01531.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 279

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 7/178 (3%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +  +      P + + ++  +R++  Q +          L        V       G+ +
Sbjct: 77  VPSQAITRPAPPAVDPVVEQRRQQAAQRMRNVADEIRRVLSPLTGSGQVKVTEGAFGVSV 136

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
            I       +F    +      +  LQ +  VLA +   I++ GHTD  P        NW
Sbjct: 137 EINASL---LFAPGEAALGSNAVSALQAVARVLAPAEFPITVEGHTDNVPISTFRFPSNW 193

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            LS  RA +  ++ + +GV+  R++   G+A  R    +  +     NRR+ IL+E R
Sbjct: 194 ELSAVRASTVARLFIDNGVTPARLTAA-GYADQRPVADNADEEGRGRNRRVTILIESR 250



 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 2/172 (1%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++++  +D+  +N   W + YADF+T+L AFF+VM+ +++ ++   + +        +N+
Sbjct: 1   MRRRRKLDEEHDNHERWLVSYADFITLLFAFFVVMYSLSSVNEGKYRVLSDSLVQAFRNV 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                G  ++   P+ S      ++       + V  +      ++     +     LS 
Sbjct: 61  NVNESG--EQIVLPKVSVVPSQAITRPAPPAVDPVVEQRRQQAAQRMRNVADEIRRVLSP 118

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
              S   K +        +                N      +  ++LA   
Sbjct: 119 LTGSGQVKVTEGAFGVSVEINASLLFAPGEAALGSNAVSALQAVARVLAPAE 170


>gi|94311700|ref|YP_584910.1| OmpA/MotB [Cupriavidus metallidurans CH34]
 gi|93355552|gb|ABF09641.1| outer membrane protein, OmpA/MotB family(modular protein)
           [Cupriavidus metallidurans CH34]
          Length = 294

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  SS   P    VL ++ + LA   +V  ++ GHTD++      + N +LS  
Sbjct: 184 PSQVTFDTDSSTIKPSFRNVLDQVAQTLAQHQDVSANVVGHTDST---GNPQYNMQLSQR 240

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA S    L   GV+  R+S   G    +    +      + NRR++I ++
Sbjct: 241 RAQSVAGYLGDRGVARTRLSA-EGRGQTQPVADNSTEAGRAQNRRVEIFLK 290


>gi|126665323|ref|ZP_01736305.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
 gi|126629951|gb|EBA00567.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
          Length = 348

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 110/353 (31%), Gaps = 32/353 (9%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMW----------IINATDDD----- 60
           +I  +     T N    +    +    +++  F+++            ++  + +     
Sbjct: 1   MIGSRRRSRSTTNVWPGYVDALS--ALLMLVIFMLLVYVVSQLFLSQTLSDRNSELARLN 58

Query: 61  -TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
                + Q             + +   QN    S     +L      +++ +  +     
Sbjct: 59  LRLSELSQLLGLEQGTTAALEQQMLIVQNSFSDSLAENENLQQQLEASRDQLMRQTADAE 118

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            + +     N      +   +      +   ++      +   +  ++  ++   +    
Sbjct: 119 ARAENLADMNQELGNKDELSNSQQTMIMRLSNQIAALQNQLRQITAALRLQKEMTVDQED 178

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           + K ++ +    L +   ++    S   +    + +L       I+       +  +F  
Sbjct: 179 ELKSVSRRLNTMLAERINQLEQYQSEFFSRL--RNILAANENIRIVGDRFLLPSELLFAS 236

Query: 240 SSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
            S++   E    L K+  VL        A    ++ I GHTD  P        NW LS  
Sbjct: 237 GSALLGAEGKRELDKLAGVLLDVVETIPADLEWILRIDGHTDRIPINTPQFPSNWELSTA 296

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           RA +  + L    V ++R+    GF             +   NRRI+I + DR
Sbjct: 297 RAVAVVRYLADQSVPQNRMVAA-GFGEFFPVADGTTPEALQENRRIEIKLTDR 348


>gi|115373807|ref|ZP_01461100.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369206|gb|EAU68148.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 663

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 21/268 (7%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +    + G    Q  P++      D          +   +              +    
Sbjct: 401 ADKCPQTPGAASAQGCPDQDGDGIQDSEDKCPAAAGNAAGQGCPDKDGDGIDDASDRCPA 460

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +   + + C               K  D +  ++++++        E      +     
Sbjct: 461 EAGPAERQGCPI-------------KDADNDGVLDEQDSCPNEAGLPELKGCPAKDADND 507

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA  + +  +     +       +     I    I+ +    FD ++S     +  +L 
Sbjct: 508 TLADHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLD 567

Query: 254 KIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           ++ ++L    E++S+   GHTD       A  N  LS  RA +    L+K GV+ +R+  
Sbjct: 568 QMAKLLNEHPEIVSVLIEGHTDDR---GAADYNRTLSKQRADTVRDYLVKKGVAAERLET 624

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDIL 337
             G+   R    +        NRR+D L
Sbjct: 625 -QGYGPDRPVQPNTTAAGRTANRRVDFL 651


>gi|213024875|ref|ZP_03339322.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 189

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             S      +   +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL  
Sbjct: 7   IESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNG 66

Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++ ++ G A   
Sbjct: 67  IPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 126

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
                 P ++ NRRI +LV ++Q
Sbjct: 127 RLSDRGPDDAINRRISLLVLNKQ 149


>gi|170756344|ref|YP_001782268.1| chemotaxis motB protein [Clostridium botulinum B1 str. Okra]
 gi|169121556|gb|ACA45392.1| chemotaxis protein MotB [Clostridium botulinum B1 str. Okra]
          Length = 247

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            R +   G+  +R    ++     + NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241


>gi|331640759|ref|ZP_08341894.1| putative motility protein [Escherichia coli H736]
 gi|331037557|gb|EGI09777.1| putative motility protein [Escherichia coli H736]
          Length = 318

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++     +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 12  MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 72  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 116

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 117 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 167 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 203

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 282


>gi|322433005|ref|YP_004210254.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321165232|gb|ADW70936.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 309

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 2/168 (1%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRN 233
                 +K     +K  L  L K +   +  + + + + K +    T  G+ I +++   
Sbjct: 73  TEGKESKKEEKESKKDDLAALKKDLMRAIEKIDSLNRLKKQIEMTVTEEGLRIELVEDAK 132

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRA 292
              F+  SS P P    +L+ + E L      ISI GHTDA P+       NW LS DRA
Sbjct: 133 GTFFETGSSKPTPALEEILKVLSEQLKSLPNSISIEGHTDAQPYATATVYGNWELSTDRA 192

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             A + + ++G+  D++S++ GFA  RL +   P++++NRRI ++V++
Sbjct: 193 NVARREMQENGIRTDQVSQVRGFADQRLHVPEKPLDASNRRISLVVQN 240



 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
          +  Q II+  K       ++ G+WK+ YADF+T +M+ F+V+W++++T   T++ I  YF
Sbjct: 3  DELQPIIVI-KKKGAHGGHHGGAWKVAYADFVTAMMSLFIVLWLMSSTSKQTQEEIAGYF 61

Query: 70 NPFGKNLMTASK 81
          N           
Sbjct: 62 NDPKGTSTKHGT 73


>gi|73540381|ref|YP_294901.1| OmpA [Ralstonia eutropha JMP134]
 gi|72117794|gb|AAZ60057.1| OmpA [Ralstonia eutropha JMP134]
          Length = 212

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S+   P    VL ++ + L    +V+ ++ GHTD++     A+ N +LS  
Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVVANVVGHTDST---GNAQYNMQLSQR 158

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           RA S    L   GV+ +R+S   G    +    +        NRR++I ++  QG
Sbjct: 159 RAQSVATYLGDRGVARNRLSA-EGRGQTQPVADNATEAGRTQNRRVEIFLKPIQG 212


>gi|326334458|ref|ZP_08200670.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325693425|gb|EGD35352.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 455

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 16/280 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F   G +    S GI  +    +       D        K   +               +
Sbjct: 176 FQQDGTDYFQHSAGIVIKFGAKDTDKDGIPDNKDACPEVKGLKEFNGCPDTDGDGIPDKD 235

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP--PLSKEKILAM 186
           +    +   ++   C ++         D C      K  N   +      P   +K   +
Sbjct: 236 DACPEVKGLKEFNGCPDTDGDGIPDKDDACPDVPGLKEFNGCPDTDGDGVPDKDDKCPDV 295

Query: 187 KRKKRL-------QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                         D    +                            +     T +FD 
Sbjct: 296 AGPAENGGCPWPDTDGDGVLDKDDLCPNEAGSASNKGCPEPNDDDQKRLNQYAKTILFDT 355

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +    ++  VL +I  VL         I GHTD++        N  LS +RA +    
Sbjct: 356 GKATIKFQSADVLNQIISVLNKFPNSRFRIEGHTDST---GKKAKNQVLSQNRADAVKVY 412

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           L++ G+  +R+  + G+   +   ++        NRR++I
Sbjct: 413 LIQGGIDANRLESV-GYGQDKPIASNKTKKGRELNRRVEI 451


>gi|330961246|gb|EGH61506.1| flagellar motor protein MotD [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 265

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 8/201 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +L       +   K   + +          P L   +       +   D  + I+  +
Sbjct: 49  SQALVGVFNDTERTMKPIPIGEQRPVSVKPAEPLLKDSEQTDAGIGQASDDPLQTIAQDV 108

Query: 204 SGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                D +    +        + I +       +F    ++P  +   +++K+  ++   
Sbjct: 109 RDAFGDLLKSDQMTVRGNELWVEIELNSSM---LFGSGDAMPSDKAFSIIEKVSGIVKRF 165

Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I + G TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +  
Sbjct: 166 DNPIHVEGFTDDQPINTSQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPI 224

Query: 322 IASDPM--NSANRRIDILVED 340
             +      + NRR+ +++  
Sbjct: 225 APNTTAAGRAKNRRVVLVISR 245



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  + +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLLKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLLKSDQ 120


>gi|260597724|ref|YP_003210295.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
 gi|260216901|emb|CBA30471.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
          Length = 520

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 9/167 (5%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---RNT 234
           L ++ +L  + +++ +     +       +   + + +    ++     SI       + 
Sbjct: 332 LKRDALLLERWQRQGEPQRYGLGLYNGQRLWLALQQAIDSYVSQPTPRDSIPHTVRLDSL 391

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD       P +  VL      +       I + GHTD        R N +LSL RA 
Sbjct: 392 SLFDTGQWRLKPGSTKVLVNALVGIKAKPGWLIVVAGHTDDV---GDERANQQLSLKRAE 448

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           S    +  +G   +    + G+   R    +      + NRR++I +
Sbjct: 449 SVRDWMRDTGDVPESCFAVQGYGESRPAAPNTTTQGRALNRRVEISL 495


>gi|170681840|ref|YP_001742391.1| hypothetical protein EcSMS35_0284 [Escherichia coli SMS-3-5]
 gi|170519558|gb|ACB17736.1| lateral flagellar motor protein B [Escherichia coli SMS-3-5]
          Length = 307

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H +K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|59889800|emb|CAH19156.1| Lateral flagellar motor protein B (MotB-like) [Escherichia coli]
 gi|284920064|emb|CBG33121.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
           042]
          Length = 307

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAAPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|330861237|emb|CBX71488.1| hypothetical protein YEW_CQ10830 [Yersinia enterocolitica W22703]
          Length = 89

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 47/86 (54%)

Query: 8  NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
            +N   I++KK+ A     ++ GSWKI YADFMT +MAFFLVMW+++ +       I +
Sbjct: 2  KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61

Query: 68 YFNPFGKNLMTASKGIFDEQNPPERS 93
          YF    K  +++ +   D  +P    
Sbjct: 62 YFRTPLKVALSSGEKSSDSTSPIPGG 87


>gi|331645436|ref|ZP_08346540.1| putative motility protein [Escherichia coli M605]
 gi|331045598|gb|EGI17724.1| putative motility protein [Escherichia coli M605]
          Length = 318

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 12  MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 72  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 116

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 117 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 167 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 203

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282


>gi|325525470|gb|EGD03283.1| flagellar motor protein MotB [Burkholderia sp. TJI49]
          Length = 201

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 51/246 (20%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +  D+ I++K+  A     ++ G+WK+ YADFMT +MAFFL+MW+++A      K I +Y
Sbjct: 3   KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN   K  +  S              ++  D SI     ++   +  G+  +      L 
Sbjct: 62  FNTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTPLA 109

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +    +                                            +  L  + 
Sbjct: 110 ERVAKPVDEA-------------------------------------AQAQLQGALERRE 132

Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + RL DL  K+ + +          + +  ++T  G+ I I+D +  PMF  SS    P 
Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLLGLRIEIVDTQKRPMFAMSSDRVEPY 192

Query: 248 TIVVLQ 253
              +L+
Sbjct: 193 MRDILR 198


>gi|157157459|ref|YP_001461420.1| hypothetical protein EcE24377A_0264 [Escherichia coli E24377A]
 gi|157159714|ref|YP_001457032.1| hypothetical protein EcHS_A0258 [Escherichia coli HS]
 gi|191165724|ref|ZP_03027563.1| putative chemotaxis protein [Escherichia coli B7A]
 gi|157065394|gb|ABV04649.1| putative chemotaxis protein [Escherichia coli HS]
 gi|157079489|gb|ABV19197.1| putative chemotaxis protein [Escherichia coli E24377A]
 gi|190904231|gb|EDV63941.1| putative chemotaxis protein [Escherichia coli B7A]
 gi|320176694|gb|EFW51731.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
           74-1112]
 gi|323169560|gb|EFZ55232.1| lateral flagellar motor protein B [Shigella sonnei 53G]
          Length = 256

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220


>gi|331671822|ref|ZP_08372618.1| putative motility protein [Escherichia coli TA280]
 gi|331070811|gb|EGI42170.1| putative motility protein [Escherichia coli TA280]
          Length = 318

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 12  MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H +K +       T +
Sbjct: 72  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEK 116

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 117 K----------ARDLNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 167 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 203

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282


>gi|218703545|ref|YP_002411064.1| hypothetical protein ECUMN_0293 [Escherichia coli UMN026]
 gi|300899473|ref|ZP_07117721.1| OmpA family protein [Escherichia coli MS 198-1]
 gi|218430642|emb|CAR11508.1| flagellar system protein [Escherichia coli UMN026]
 gi|300356952|gb|EFJ72822.1| OmpA family protein [Escherichia coli MS 198-1]
          Length = 307

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKIRPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K           +  N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------AHDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|194290514|ref|YP_002006421.1| outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
 gi|193224349|emb|CAQ70360.1| putative outer membrane lipoprotein [Cupriavidus taiwanensis LMG
           19424]
          Length = 212

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S+   P    VL ++ + L+   +V  ++ GHTD++        N +LS  
Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLSQHQDVSANVVGHTDST---GNPNYNMQLSQR 158

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R+S   G    +    +      + NRR++I ++  QG
Sbjct: 159 RAQSVAGYLGDRGVARNRLSA-EGRGQSQPVADNGTEAGRAQNRRVEIFLKPIQG 212


>gi|215485380|ref|YP_002327811.1| hypothetical protein E2348C_0225 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215263452|emb|CAS07773.1| flagellar system protein MbhA [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 261

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  + +   ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  +++   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|347159|gb|AAC36902.1| protein F [Pseudomonas fluorescens]
          Length = 317

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 9/278 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  +NP        +  +    N    +     D + ++ I  ++  +       + 
Sbjct: 42  KHIEDGYNPGASIGYFITDDVSVNLNYDTTNHTRSNDGTGNQKIKGDTGSVTAQYHFGQA 101

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD               + N      +     
Sbjct: 102 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQSTLAIAGAGVKYYFTNNLFARAGVESDYN 161

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 162 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 222 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSI---GPDAYNQKLSQRRADAVKQVL 278

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           +K GV+  RI+ + G+   R    +        NRR++
Sbjct: 279 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVE 315


>gi|30061847|ref|NP_836018.1| hypothetical protein S0298 [Shigella flexneri 2a str. 2457T]
 gi|56479639|ref|NP_706230.2| hypothetical protein SF0277 [Shigella flexneri 2a str. 301]
 gi|110804360|ref|YP_687879.1| hypothetical protein SFV_0301 [Shigella flexneri 5 str. 8401]
 gi|30040091|gb|AAP15824.1| putative motility protein [Shigella flexneri 2a str. 2457T]
 gi|56383190|gb|AAN41937.2| putative motility protein [Shigella flexneri 2a str. 301]
 gi|110613908|gb|ABF02575.1| putative motility protein [Shigella flexneri 5 str. 8401]
 gi|281599639|gb|ADA72623.1| putative motility protein [Shigella flexneri 2002017]
          Length = 261

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|15615801|ref|NP_244105.1| flagellar motor protein MotS [Bacillus halodurans C-125]
 gi|10175862|dbj|BAB06958.1| BH3239 [Bacillus halodurans C-125]
          Length = 250

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 10/209 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q         +  +  + L  + D E            P  + +    ++ +   DL 
Sbjct: 40  DAQKFRAIAESFQQRQVFEFLPSAIDFESPKEDRGEERKEPFDEGEYGDEQKDEV--DLD 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + ++     L  + + + +       G+++ + +Q    +F+   +  LP     L K+G
Sbjct: 98  ELLAEVEEFLEENELTEQISATRDDRGVVLILQEQ---ALFETGEAEVLPGARPFLDKVG 154

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
            ++     ++ + GHTD  P        NW LS  RA S  + ++    V   R    +G
Sbjct: 155 TLVELIPNIVKVEGHTDNRPISTYRYPSNWELSGARASSVIRYIIDHHNVDPSRFIA-TG 213

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           F   R  + +        NRR+ I++ D 
Sbjct: 214 FGDTRPVVPNTTEENLQQNRRVIIVISDP 242



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 55/144 (38%), Gaps = 3/144 (2%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W + ++D MT+++ FF++++ ++  D    +AI + F       
Sbjct: 1   MKRRKRQPEK--GAPRWMVTFSDLMTLILVFFILLFSMSVVDAQKFRAIAESFQQRQVFE 58

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
              S   F+     +R  + K      E+  +   ++ +     + +    EN +    +
Sbjct: 59  FLPSAIDFE-SPKEDRGEERKEPFDEGEYGDEQKDEVDLDELLAEVEEFLEENELTEQIS 117

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKS 160
           + + +     + ++    +     
Sbjct: 118 ATRDDRGVVLILQEQALFETGEAE 141


>gi|311696643|gb|ADP99516.1| flagellar motor protein MotB [marine bacterium HP15]
          Length = 277

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 8/200 (4%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                     + +S  +      E     P    E+   +   +    +    S  +  L
Sbjct: 66  ADDIGGSPLTMIESETVSLPEPTESQTREPEFIDERAEGVAPTQIPGGVIDLASRMIREL 125

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
            ++   + +     +  ++I   ++     F    +   PE I +++++  VL+  T  +
Sbjct: 126 ESEVASEALSVNYDQNQVVIRFSEEAT---FRSGEAAIKPEMIPIIERVVNVLSACTGDV 182

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324
            + G+TD  P  +     NW LS  RA S    L+    V  DR+    G A       +
Sbjct: 183 LVSGYTDDRPISSDRYRSNWDLSAARAVSVVHELVMNRQVPADRVVAA-GRAETNPLAPN 241

Query: 325 DP--MNSANRRIDILVEDRQ 342
           D     + NRR++I + + +
Sbjct: 242 DSPENRALNRRVEIAIRNPE 261


>gi|323171084|gb|EFZ56733.1| lateral flagellar motor protein B [Escherichia coli LT-68]
          Length = 307

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + +I      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|294491414|gb|ADE90170.1| putative chemotaxis protein [Escherichia coli IHE3034]
 gi|307628268|gb|ADN72572.1| hypothetical protein UM146_16065 [Escherichia coli UM146]
 gi|323953128|gb|EGB48996.1| OmpA family protein [Escherichia coli H252]
          Length = 256

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            VL      I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 136 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|4580970|gb|AAD24557.1|AF117965_1 OprF [Pseudomonas marginalis pv. marginalis]
          Length = 321

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 9/278 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 45  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD      +        + N      +     
Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            ++  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 225 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           +K GV+  R++ + G+   R    +        NRR++
Sbjct: 282 VKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVE 318


>gi|323976251|gb|EGB71344.1| OmpA family protein [Escherichia coli TW10509]
 gi|327254574|gb|EGE66190.1| lateral flagellar motor protein B [Escherichia coli STEC_7v]
          Length = 307

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++ +   +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFNGGGLSPLNKISPTHPLKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKSNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            +G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 DAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|347163|gb|AAA62423.1| protein F [Pseudomonas fluorescens]
          Length = 317

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +A      + + GHTD+         N +LS  RA + 
Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            QVL+K GV+  R++ + G+   R    +        NRR++
Sbjct: 275 KQVLVKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVE 315


>gi|221640526|ref|YP_002526788.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161307|gb|ACM02287.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 228

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L        V    T + +++++       +F   S+   P+    L  + + 
Sbjct: 89  LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLGAVAQN 145

Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L         + GHTD++     A  N  LS+ RA S   VL+ +GV   R+S I G   
Sbjct: 146 LLRYPNSTIAVVGHTDST---GSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAI-GRGE 201

Query: 318 HRLKIASDP--MNSANRRIDILVE 339
            +   ++      + NRR+DI++ 
Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIR 225


>gi|320643247|gb|EFX12446.1| hypothetical protein ECO9389_21954 [Escherichia coli O157:H- str.
           493-89]
 gi|320648894|gb|EFX17512.1| hypothetical protein ECO2687_10031 [Escherichia coli O157:H- str. H
           2687]
          Length = 256

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|170021342|ref|YP_001726296.1| hypothetical protein EcolC_3350 [Escherichia coli ATCC 8739]
 gi|188495907|ref|ZP_03003177.1| lateral flagellar motor protein B [Escherichia coli 53638]
 gi|169756270|gb|ACA78969.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
 gi|188491106|gb|EDU66209.1| lateral flagellar motor protein B [Escherichia coli 53638]
          Length = 307

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 70/341 (20%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M   G++     +  I+++++  +   ++ G+WK+ +ADF   +MA F+ +WI+N+    
Sbjct: 1   MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +++I    +                Q+       + ++     H  K +       T +
Sbjct: 61  ERESIIAALH---------------GQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEK 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           K              N + +   K S T   E    +             E   +P   +
Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             I   + +   +  + KI      L+ +                         P+FD  
Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +  +             +       ++ G             +  LS  R      VL 
Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271


>gi|347161|gb|AAC36903.1| protein F [Pseudomonas tolaasii]
          Length = 317

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 9/278 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 42  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIGGDTGSLTAQYHFGQA 101

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD               + N      +     
Sbjct: 102 GVDSLRPYVEGGFGHQSRSNVEADGHKGRDQSTLAIAGAGVKYYFTNNLYARAGVEADYA 161

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 162 IDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA +  QVL
Sbjct: 222 KSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAVKQVL 278

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           +K G++ +R+S + G+   R    +        NRR++
Sbjct: 279 VKDGIAPNRVSSV-GYGKSRPVADNATEAGRAINRRVE 315


>gi|226949496|ref|YP_002804587.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
 gi|226843238|gb|ACO85904.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
          Length = 254

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 11/162 (6%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++    +++++  K+   +           V       G+ I I D     +F+   + 
Sbjct: 83  DSVTEDIKMKEIKSKLEKEIEKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAE 136

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK- 301
            L ++  +L++I ++L      I + GHTD  P  N   R NW LS  RA +    L   
Sbjct: 137 VLKQSSALLKQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNI 196

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            G+S +++  I  +  +  K  +      + NRR++I +  +
Sbjct: 197 GGISANKL-SIQAYGEYMPKFNNATEAGRAKNRRVEISIVRK 237



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I Y+D +T+L+A F+VM+ ++  D    +   Q FN   K     
Sbjct: 2   KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  + +         +  + +   + +T++    +I S  +K+  +   ++   +     
Sbjct: 59  SNVLQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDAD 118

Query: 140 S 140
            
Sbjct: 119 G 119


>gi|312962474|ref|ZP_07776965.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
 gi|311283401|gb|EFQ61991.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
          Length = 326

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 9/283 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 45  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD      +        + N      +     
Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            ++  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 225 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +K GV+  R++ + G+   R    +        NRR++  VE 
Sbjct: 282 VKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323


>gi|34763092|ref|ZP_00144063.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887226|gb|EAA24326.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 202

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L A               ++I++        F   S+         L  I + L
Sbjct: 64  DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 120

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  E  I + G+TD +        N  LS  RA +  Q L+  GV+ +RI   +GF   
Sbjct: 121 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVASNRIVA-NGFGSS 176

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRR++I +   Q
Sbjct: 177 NPVASNSTQEGRLQNRRVEIKILPAQ 202


>gi|325923680|ref|ZP_08185304.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325545846|gb|EGD17076.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 407

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 19/252 (7%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 161 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 220

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217
               +       +P               +      +     G+   +            
Sbjct: 221 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPASQPGQTI 280

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 + +SI        FD + S   P+   +L +  E+L    +  + + GHTD+  
Sbjct: 281 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKVEVAGHTDS-- 336

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
            +     N +LS  RA + Y  L K+GV   R+    G+   R    +            
Sbjct: 337 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 395

Query: 329 SANRRIDILVED 340
           + NRR ++ V++
Sbjct: 396 AKNRRTELNVQN 407


>gi|242238952|ref|YP_002987133.1| flagellar motor protein MotB [Dickeya dadantii Ech703]
 gi|242131009|gb|ACS85311.1| OmpA/MotB domain protein [Dickeya dadantii Ech703]
          Length = 377

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 4/216 (1%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L+   +       +   S        +       +            + +     + 
Sbjct: 50  PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGADPTHQEGDVSRQIDTMDGRLEEI 109

Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +L  L +++   +        +   +L E    G+ I IID  N PMF   S+   P   
Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  +L      IS+ GHTD + +        NW LS DRA ++ + L+  G++E 
Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDARYATGERGYSNWELSADRANASRRELIAGGLTEG 229

Query: 308 RISKISGFAHH-RLKIASDPMNSANRRIDILVEDRQ 342
           ++ ++ G A    LK A D  ++ NRRI ++V ++Q
Sbjct: 230 KVLRVVGMADTMNLKQAKDGSDAINRRISLVVLNKQ 265



 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 50/107 (46%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T+   + D  NP      +      D     +++D ++  
Sbjct: 62  TPLKIAITSGPKMSDASNPIPGGGADPTHQEGDVSRQIDTMDGRLEE 108


>gi|206970743|ref|ZP_03231695.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
 gi|218233445|ref|YP_002366413.1| flagellar motor protein MotS [Bacillus cereus B4264]
 gi|218896660|ref|YP_002445071.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
 gi|296502310|ref|YP_003664010.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
 gi|206734379|gb|EDZ51549.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
 gi|218161402|gb|ACK61394.1| putative chemotaxis protein MotB [Bacillus cereus B4264]
 gi|218544664|gb|ACK97058.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
 gi|296323362|gb|ADH06290.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
          Length = 225

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +   ++        F              +    +    L K  +      + +   +  
Sbjct: 2   SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 61

Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +       +K + +    ++   L   V +N +  V      TG+ + I+D     +
Sbjct: 62  TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 118

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           FD   +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA + 
Sbjct: 119 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 178

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
              L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 179 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 225


>gi|149375283|ref|ZP_01893054.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
 gi|149360319|gb|EDM48772.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
          Length = 355

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 82/253 (32%), Gaps = 15/253 (5%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E   +             +     +      S  +  E    S      +  +   +  
Sbjct: 104 EEEKARRLEQQYNAEAQALRVEDLGKAIASAESELEDEEQLTASQRAIILQLSNQISALQ 163

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRK-KRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
            + S           L+ EK   ++   KRL  L  +  + L    ++   +        
Sbjct: 164 DQLSRITAALRLQEDLTAEKEAELEEVGKRLNTLLAERVNELERYQSEFFGRLRDILQDN 223

Query: 222 TGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGH 271
             I I        +  +F   S+   PE    L K+ EVL             ++ I GH
Sbjct: 224 ENIRIVGDRFLLPSELLFASGSARLGPEGQRELDKLAEVLLDVVAAIPEDIDWILRIDGH 283

Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS- 329
           TD  P    A   NW LS  RA +  + L   GV ++R+    GF       +     + 
Sbjct: 284 TDRIPINTEAFPSNWELSTARAVAVVRYLASEGVPQNRMVAA-GFGEFFPVASGGSAEAL 342

Query: 330 -ANRRIDILVEDR 341
             NRRI+I + DR
Sbjct: 343 RQNRRIEIKLTDR 355


>gi|120610159|ref|YP_969837.1| hypothetical protein Aave_1472 [Acidovorax citrulli AAC00-1]
 gi|120588623|gb|ABM32063.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 452

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
              +    +     ++  ++  M     +     ++   L   + + +   V        
Sbjct: 252 NYRLASRSDELFAAINAIRLPKMPSVVAVAPPKPRLRQFLEPEIREGL---VEVNDQADR 308

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282
            ++++   R   +FD +S+   P  + V+Q+I   L   +  + + G++D  P R     
Sbjct: 309 SIVTL---RGDGLFDPASTEVKPRYVAVIQRIASALNEVSGKVVVNGYSDNQPIRTARFP 365

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            NW LS +RA +   +L ++     R+ +  G A       +      + NRR++I++ 
Sbjct: 366 SNWHLSQERAQAVAAMLQRTIADGSRL-RAEGRAESDPIAPNSTPEGRALNRRVEIVLM 423


>gi|281177445|dbj|BAI53775.1| putative motility protein [Escherichia coli SE15]
          Length = 262

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 22  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 82  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226


>gi|104780466|ref|YP_606964.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95109453|emb|CAK14154.1| putative outer membrane protein; OmpA family [Pseudomonas
           entomophila L48]
          Length = 262

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D    +   +    + +    +   +   +     A
Sbjct: 39  QSDPQSSKVAALETKDAQDWLNKADKAYMERENEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EAELKNAAAQRAQAKLDARDAQIKKLQDSLNAKQTDRGTLVTFGD----VLFDFNKANLK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    I G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 GSAYPNITKLAQFLQENPERKVIIEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVA-QGYGKEYPVADNTSNSGRAQNRRVEVTISNDN 250


>gi|82775833|ref|YP_402180.1| hypothetical protein SDY_0484 [Shigella dysenteriae Sd197]
 gi|81239981|gb|ABB60691.1| putative motility protein [Shigella dysenteriae Sd197]
          Length = 259

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 19  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKSRDVNEKTALLKKKSATELG 78

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 79  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 138

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 139 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 198

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 199 DQMLLDAKNPQSAGNRRIEIMVLTK 223


>gi|299066021|emb|CBJ37202.1| putative outer membrane lipoprotein [Ralstonia solanacearum CMR15]
          Length = 209

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + E L+   E   ++ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAVIKPSFRGPLDSVAETLSQHPELAANVVGHTDST---GNPNYNMSLSQR 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+  R+S   G    +    +      + NRR++I ++  QG
Sbjct: 156 RAQSVASYLTDRGVARTRLSA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209


>gi|256024126|ref|ZP_05437991.1| hypothetical protein E4_12175 [Escherichia sp. 4_1_40B]
 gi|300947286|ref|ZP_07161489.1| OmpA family protein [Escherichia coli MS 116-1]
 gi|301019019|ref|ZP_07183235.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|299882424|gb|EFI90635.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|300453087|gb|EFK16707.1| OmpA family protein [Escherichia coli MS 116-1]
 gi|315134915|dbj|BAJ42074.1| putative motility protein [Escherichia coli DH1]
          Length = 256

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220


>gi|77361745|ref|YP_341320.1| lipoprotein [Pseudoalteromonas haloplanktis TAC125]
 gi|76876656|emb|CAI87878.1| putative lipoprotein [Pseudoalteromonas haloplanktis TAC125]
          Length = 209

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +    +    GV        + + +        F    S         L  I 
Sbjct: 67  DYMDKQETAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFHNTLSAIA 123

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +V+       +S+ GHTD++        N  LS  RA S    L+   +  +RIS  +G+
Sbjct: 124 KVMNKYEKTYLSVEGHTDST---GKDSYNMSLSQQRAQSVKNYLVNQQIMAERIST-TGY 179

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              R   ++D     + NRR++I +
Sbjct: 180 GETRPISSNDSANGRAQNRRVEIQI 204


>gi|332185595|ref|ZP_08387343.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
           S17]
 gi|332014573|gb|EGI56630.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
           S17]
          Length = 225

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +++ + A         +   +      L A      V        +L+++    +   F 
Sbjct: 61  TEKILGAGIGGLAGAGIGAYMDKQERDLRARTAGTDVQVVRQGDDLLLNL---PSGITFA 117

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS   P+    L ++ ++L+   +  I + GHTD++        N  LS  RA +   
Sbjct: 118 YDSSTVQPQFRQTLDQVADILSQYKQTYIDVYGHTDST---GSDSYNQALSERRAVAVAD 174

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED-RQG 343
            L   GV   RI    GF   +   ++D     +ANRR++I +   R+G
Sbjct: 175 YLASRGVQPARIGT-RGFGKSQPIASNDTDAGRAANRRVEIKIVPIREG 222


>gi|124007829|ref|ZP_01692531.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123986775|gb|EAY26556.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 715

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 7/130 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           +        I++    + N   FD   S     +   L ++   + +   +   + GHTD
Sbjct: 590 IKRNLYLAPIIVGQKIRLNNLFFDVGKSALKSSSFAELNRLVNSMKNYPNMTIEVSGHTD 649

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
           A         N +LS DRA +    L   G+   R+    G+   +    +      + N
Sbjct: 650 AQ---GSPAKNLQLSKDRANAVLNYLKSKGIPASRMQA-KGYGQTKPLATNGTAQGRARN 705

Query: 332 RRIDILVEDR 341
           RR++ ++  +
Sbjct: 706 RRVEFMILKK 715


>gi|15799935|ref|NP_285947.1| hypothetical protein Z0291 [Escherichia coli O157:H7 EDL933]
 gi|15829511|ref|NP_308284.1| hypothetical protein ECs0256 [Escherichia coli O157:H7 str. Sakai]
 gi|291281074|ref|YP_003497892.1| putative motility protein [Escherichia coli O55:H7 str. CB9615]
 gi|293413506|ref|ZP_06656155.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
 gi|331651164|ref|ZP_08352189.1| putative motility protein [Escherichia coli M718]
 gi|12513001|gb|AAG54555.1|AE005201_8 putative motility protein [Escherichia coli O157:H7 str. EDL933]
 gi|13359714|dbj|BAB33680.1| putative motility protein [Escherichia coli O157:H7 str. Sakai]
 gi|209745376|gb|ACI70995.1| putative motility protein [Escherichia coli]
 gi|209745378|gb|ACI70996.1| putative motility protein [Escherichia coli]
 gi|209745380|gb|ACI70997.1| putative motility protein [Escherichia coli]
 gi|209745382|gb|ACI70998.1| putative motility protein [Escherichia coli]
 gi|290760946|gb|ADD54907.1| Putative motility protein [Escherichia coli O55:H7 str. CB9615]
 gi|291433564|gb|EFF06537.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
 gi|323938776|gb|EGB35022.1| OmpA family protein [Escherichia coli E1520]
 gi|331050905|gb|EGI22957.1| putative motility protein [Escherichia coli M718]
          Length = 261

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|226950064|ref|YP_002805155.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
 gi|226842943|gb|ACO85609.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
          Length = 247

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI +++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINDLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     S NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241


>gi|302392384|ref|YP_003828204.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204461|gb|ADL13139.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 248

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 8/155 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + +L +      S L    +   +  E T  G+ I         +FD   +    +   +
Sbjct: 84  MPELNRINQKITSYLQEQELEDEIKVEMTERGLTIRFT---GKVLFDIGRATIKEDAYSI 140

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRI 309
           L KI  +++     I + GHTD  P  N     NW LS  RA    +  ++   ++  ++
Sbjct: 141 LDKISGIISEVPNQIMVEGHTDNLPISNSRFPSNWELSTARATEVVKYFIEENSITPAKL 200

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           S   G++ ++    +D     + NRR+D+++  R+
Sbjct: 201 SAA-GYSKYKPVKPNDSPENRALNRRVDVILLKRE 234



 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 45/121 (37%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++K   ++  ++  +W   Y D MT+L+AFF++++  ++ D    + + +        L 
Sbjct: 3   RRKKRRNNDESDDSNWLTTYGDMMTLLLAFFVLLYSFSSVDVQKFRNVVEALQGNLGVLK 62

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   +        +N     ++    K +  L+      + + +  E  +      
Sbjct: 63  GGKTISSSDLITAGVRDENLGMPELNRINQKITSYLQEQELEDEIKVEMTERGLTIRFTG 122

Query: 138 Q 138
           +
Sbjct: 123 K 123


>gi|294852539|ref|ZP_06793212.1| outer membrane protein [Brucella sp. NVSL 07-0026]
 gi|294821128|gb|EFG38127.1| outer membrane protein [Brucella sp. NVSL 07-0026]
          Length = 258

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 89  NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 201

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 202 GASQPIASNATPEGRAQNRRVEIQISPLRG 231


>gi|261418451|ref|YP_003252133.1| flagellar motor protein MotB [Geobacillus sp. Y412MC61]
 gi|319767588|ref|YP_004133089.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
 gi|261374908|gb|ACX77651.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC61]
 gi|317112454|gb|ADU94946.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
          Length = 259

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 10/208 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+     ++         D     +      ++E            +  K K+ L  +  
Sbjct: 47  QEIARAFSTAFAGGTGVLDFQSPIEPITPPAQDEEGRHQAKQPSPAVNGKEKEELGQIKA 106

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI S +     + +   +    T  G+ I+I+D     +FD  S+    +   +  +I  
Sbjct: 107 KIDSYIHD---NKLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRRLAAEISA 160

Query: 258 VL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L  +    I I GHTD  P  N     NW LS+ RA +  +VL+++   + R     G+
Sbjct: 161 LLVMNPPRNIIISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGY 220

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++   ++        NRR++IL+  R
Sbjct: 221 GEYKPIASNATAAGRMKNRRVEILILPR 248


>gi|331661626|ref|ZP_08362549.1| putative motility protein [Escherichia coli TA143]
 gi|331060048|gb|EGI32012.1| putative motility protein [Escherichia coli TA143]
          Length = 261

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|163789638|ref|ZP_02184076.1| chemotaxis motB protein [Carnobacterium sp. AT7]
 gi|159875170|gb|EDP69236.1| chemotaxis motB protein [Carnobacterium sp. AT7]
          Length = 249

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 8/153 (5%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           +L K  +  +  L   NI      E  + GI ++I +     +F   S+I        L 
Sbjct: 98  ELLKMYNEVVQFLEDKNITSQASVEYDQDGIYVNIQES---ILFGSGSAIIADSGKQTLN 154

Query: 254 KIGEVLAHSTEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISK 311
            +GE++      + I G+TD  P +      NW LS  RA S  + L  +  V+  R+  
Sbjct: 155 DLGELIQKFDNAVVIEGYTDNVPMYNANFSSNWELSTGRALSVLRYLSEERDVNPTRL-A 213

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
             G+  +   + +D     S NRR++I++   Q
Sbjct: 214 AKGYGEYHPLVPNDSEENRSKNRRVNIVIVYDQ 246


>gi|222032078|emb|CAP74817.1| Protein mbhA [Escherichia coli LF82]
          Length = 261

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|213962352|ref|ZP_03390615.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
           Capno]
 gi|213955018|gb|EEB66337.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
           Capno]
          Length = 360

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280
             ++  I     T +FD   S+  P+   +L  I  ++  + +   +  GHTD +     
Sbjct: 240 QRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT---GT 296

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              N +LS DRA +  Q L + GVS+ R+    G+   R   ++D       NRR++I V
Sbjct: 297 PEHNLKLSQDRADAIKQYLSRHGVSKKRLEA-KGYGQTRPIESNDTERGKEINRRVEINV 355

Query: 339 EDRQ 342
              Q
Sbjct: 356 IKDQ 359


>gi|83310388|ref|YP_420652.1| hypothetical protein amb1289 [Magnetospirillum magneticum AMB-1]
 gi|82945229|dbj|BAE50093.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
          Length = 333

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 30/326 (9%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95
           + D   T++M   +V  ++                    + +        E    + + Q
Sbjct: 17  FVDALATLIMV--VVFLLMIFVLAQFFLGQALSGRQKALDDLGREMAALAE----KLNLQ 70

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
            K + ++   +  +  + +          Q +   +      +     +  ++   E   
Sbjct: 71  TKANAALQAELVSSRAEKEKLEHWAAGVQQDMAALLTLKDEKEAELAAEKKIS--DEGRA 128

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            L   +   +++ +E       L   +    ++K ++ DL K+++  L+G V +      
Sbjct: 129 QLALLSRQIEALKEELARVAAALDASETRDKEQKAQISDLGKRLNVALAGKVEELQKYRS 188

Query: 216 LFETTRTGIL-----ISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263
            F      +L     I I   R    +  +F   S+    E    ++K+   +       
Sbjct: 189 EFFGRLRKVLGDRPGIRIEGDRFVFQSELLFATGSAELGTEGAEQVRKLAATIREINAGM 248

Query: 264 -----EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                 V+ + GHTD  P        NW LS  RA +  + L   GV  DR+   +GF  
Sbjct: 249 PKGLNWVLRVDGHTDKRPITSGKFPSNWELSTARAITVLRALAADGVPRDRL-AAAGFGE 307

Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341
            +   + +     + NRRI+I  + R
Sbjct: 308 FQPVDSGNTEAAYAKNRRIEIRFDQR 333


>gi|121998797|ref|YP_001003584.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
 gi|121590202|gb|ABM62782.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
          Length = 242

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 6/156 (3%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                 L+ L + +       V   + +  +        L   +D     +F+   +   
Sbjct: 76  EGEPSVLEGLPEPLDEADPVEVPAELEEAGIQAVGEEETLTFRLDDA--VLFETGRAELQ 133

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGV 304
            E    + ++  +   +   +S+ GHTD  P        NW LS  RA +  + L + G+
Sbjct: 134 AEGQAAIDELIPIFQATGVRLSVEGHTDNIPIATGQFPSNWELSSARASAVLRYLEEQGL 193

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              R+  I G+   R    ++     + NRR++I +
Sbjct: 194 DPRRMRAI-GYGDIRPIADNETAEGRAENRRVEITL 228


>gi|296332050|ref|ZP_06874514.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675555|ref|YP_003867227.1| putative flagellar motor apparatus component [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296150821|gb|EFG91706.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413799|gb|ADM38918.1| putative flagellar motor apparatus component [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 236

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 75/195 (38%), Gaps = 11/195 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D +K K    S   E    + +   +   +     A K++ +   L KK+++ +     +
Sbjct: 49  DLQKFKAAVDSIQKEGGGLQPDQTSIEKKNTSPADAKKQEDQQDQLLKKVNTYIKD---N 105

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++   +  +    G+++ + +     +FD   +  L     +L +I  +L      I + 
Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDSGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327
           GHTD+          NW LS  RA    Q       +   R   + G+A  +    +   
Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221

Query: 328 N--SANRRIDILVED 340
                NRR++I+++ 
Sbjct: 222 EHMKENRRVEIVIKK 236



 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++       ++  SW + ++D +T+++ FF++++ ++  D    KA              
Sbjct: 10  RRNGSGKNSHSSSSWMVTFSDLITLILVFFILLFSMSQIDLQKFKAAVDSIQ-------K 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
              G+  +Q   E+ + +  D    E     
Sbjct: 63  EGGGLQPDQTSIEKKNTSPADAKKQEDQQDQ 93


>gi|52079917|ref|YP_078708.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
 gi|52785288|ref|YP_091117.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
 gi|52003128|gb|AAU23070.1| motility protein B [Bacillus licheniformis ATCC 14580]
 gi|52347790|gb|AAU40424.1| MotB [Bacillus licheniformis ATCC 14580]
          Length = 259

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           E   +  E+   P  +K+   A K K + Q L K        +   N+ K V  + T  G
Sbjct: 73  EPKTSTTEDGKSPDQAKDLSEAQKEKDK-QSLKKIQEQVNRFIKEKNLQKQVNTKLTDEG 131

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR 282
           +L+SI D      FD   +    + I + +++ ++L  +    I I GHTD  P RN   
Sbjct: 132 LLLSIEDN---IFFDSGKAEIRQQDIPLAKEVSDLLVLNPPRNIVISGHTDNVPIRNSQF 188

Query: 283 -DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             NW LS+ RA +   +L+++   + +I    G+   +   ++D       NRR++IL+ 
Sbjct: 189 KSNWHLSVMRAVNFMGLLIENPKLDAKIFSAKGYGEFKPIASNDTEEGRRKNRRVEILIL 248


>gi|293408320|ref|ZP_06652159.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
 gi|291471498|gb|EFF13981.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
          Length = 433

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  E       +     R   MF             V+ K    +A     
Sbjct: 300 LANEIARGLLTVEEDDHHSRVIF---RGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA 356

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   G+   RI ++ G         +
Sbjct: 357 VTVTGHTDSQPIHSAEFPSNQVLSEKRAAEVASLLTSGGIPASRI-RVVGKGDTVPVADN 415

Query: 325 --DPMNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 416 RTKTGRAQNRRVEILVVE 433


>gi|226944750|ref|YP_002799823.1| hypothetical protein Avin_26720 [Azotobacter vinelandii DJ]
 gi|226719677|gb|ACO78848.1| OmpA/MotB domain protein [Azotobacter vinelandii DJ]
          Length = 430

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 10/226 (4%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                   ++        +           +        +T       + +  F      
Sbjct: 207 PAALSPHWHDPVAAPPRVRRSLPVWVGAALAALLCLGLFATFQWLLAGRSDAAFAAIDQL 266

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                +           +++  L   + D +            +  S++  R   +FD  
Sbjct: 267 RLPRVLAVAPTPAAPEPRLAKLLEAEIRDGL------VRVSDEVDRSLVVLRGDGLFDSG 320

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL 299
           ++  +     +L +IG+ L  +   + + G+TD  P R      NW LS  RA +    L
Sbjct: 321 AAQVIERFQPLLARIGDALNTTRGSVLVMGYTDNVPIRGLRYASNWELSQARADTVKAQL 380

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
                   R+ +  G         +D     + NRR++I +    G
Sbjct: 381 QARLSDPGRV-RAEGRGAADPVAPNDSPANRARNRRVEITLLVPPG 425


>gi|86130870|ref|ZP_01049469.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818281|gb|EAQ39441.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 326

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 20/303 (6%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +++       K +E  ++   K+    SK + + +   E++ + +    +D     N  +
Sbjct: 14  LVSCVPAKKFKDLEAKYSRLRKDNRNMSKELAEAKAALEKTKEERDLALVDLDALSNKYN 73

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G  +  K       + +    +  S     +  ++ +  ++L    +          
Sbjct: 74  EVSGEYDAAKANLAQLQDSYNALETNSSASIAENSKKNRQLLEELESKQNDLAEKTAALE 133

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISS----------TLSGLVADNIVKGVLFETTRT 222
                L + +     R  R+ +L   I++           +S  + D   KG+  E    
Sbjct: 134 AERKRLERLQKDLADRSARVDELEGLIAAKDAKMRGLKDAISKALTDFEGKGLTVEQRDG 193

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA 281
            + +S+    N  +FD  S          ++++G VLA + E+   I GHTD  P+    
Sbjct: 194 KVYVSL---ENKLLFDSGSWTVGTNGTKAVKQLGSVLADNPEIAVLIEGHTDNVPYGGSG 250

Query: 282 R--DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
               NW LS  RA S   +L     +    ++   G   +     +D     + NRRI++
Sbjct: 251 NLQGNWDLSAKRATSIVNILRQNKRIDPKNLTAA-GRGEYAPVAENDTPENKAKNRRIEV 309

Query: 337 LVE 339
           ++ 
Sbjct: 310 ILT 312


>gi|218550065|ref|YP_002383856.1| hypothetical protein EFER_2750 [Escherichia fergusonii ATCC 35469]
 gi|218357606|emb|CAQ90245.1| flagellar system protein [Escherichia fergusonii ATCC 35469]
          Length = 296

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 56  AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  +++   +NW LS DRA SA +VL  +G+ ED++ ++S  A
Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMA 235

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260


>gi|75760652|ref|ZP_00740680.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228900309|ref|ZP_04064539.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
 gi|228907361|ref|ZP_04071219.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
 gi|228920439|ref|ZP_04083784.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228938842|ref|ZP_04101442.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228952108|ref|ZP_04114203.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228958007|ref|ZP_04119744.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228971723|ref|ZP_04132344.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978332|ref|ZP_04138709.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
 gi|229043482|ref|ZP_04191192.1| OmpA/MotB domain protein [Bacillus cereus AH676]
 gi|229069280|ref|ZP_04202570.1| OmpA/MotB domain protein [Bacillus cereus F65185]
 gi|229078910|ref|ZP_04211462.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
 gi|229109185|ref|ZP_04238784.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
 gi|229144340|ref|ZP_04272746.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
 gi|229149929|ref|ZP_04278157.1| OmpA/MotB domain protein [Bacillus cereus m1550]
 gi|229178137|ref|ZP_04305508.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
 gi|229189825|ref|ZP_04316836.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
 gi|74491866|gb|EAO55054.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228593633|gb|EEK51441.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
 gi|228605267|gb|EEK62717.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
 gi|228633610|gb|EEK90211.1| OmpA/MotB domain protein [Bacillus cereus m1550]
 gi|228639127|gb|EEK95551.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
 gi|228674195|gb|EEL29440.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
 gi|228704324|gb|EEL56758.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
 gi|228713767|gb|EEL65652.1| OmpA/MotB domain protein [Bacillus cereus F65185]
 gi|228725860|gb|EEL77107.1| OmpA/MotB domain protein [Bacillus cereus AH676]
 gi|228781349|gb|EEM29550.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
 gi|228787813|gb|EEM35771.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228801714|gb|EEM48594.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228807640|gb|EEM54164.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228820691|gb|EEM66716.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228839069|gb|EEM84365.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228852222|gb|EEM97018.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
 gi|228859344|gb|EEN03774.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
          Length = 226

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +   ++        F              +    +    L K  +      + +   +  
Sbjct: 3   SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 62

Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +       +K + +    ++   L   V +N +  V      TG+ + I+D     +
Sbjct: 63  TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           FD   +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA + 
Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
              L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 226


>gi|30019773|ref|NP_831404.1| flagellar motor protein MotS [Bacillus cereus ATCC 14579]
 gi|229127054|ref|ZP_04256053.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
 gi|29895318|gb|AAP08605.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
 gi|228656407|gb|EEL12246.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
          Length = 226

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +   ++        F              +    +    L K  +      + +   +  
Sbjct: 3   SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMEN 62

Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +       +K + +    ++   L   V +N +  V      TG+ + I+D     +
Sbjct: 63  TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           FD   +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA + 
Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
              L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 226


>gi|17547099|ref|NP_520501.1| hypothetical protein RSc2380 [Ralstonia solanacearum GMI1000]
 gi|17429400|emb|CAD16087.1| probable bacterial outer membrane transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 209

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + E L+   E   ++ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAVIKPSFRGPLDSVAETLSQHPELAANVVGHTDST---GNPNYNMSLSQR 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R+S   G    +    +      + NRR++I ++  QG
Sbjct: 156 RAQSVASYLTDRGVARNRMSA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209


>gi|23502081|ref|NP_698208.1| OmpA family protein [Brucella suis 1330]
 gi|161619159|ref|YP_001593046.1| OmpA/MotB domain-containing protein [Brucella canis ATCC 23365]
 gi|163843469|ref|YP_001627873.1| OmpA/MotB domain-containing protein [Brucella suis ATCC 23445]
 gi|225852700|ref|YP_002732933.1| OmpA/MotB domain-containing protein [Brucella melitensis ATCC
           23457]
 gi|254701944|ref|ZP_05163772.1| OmpA family protein [Brucella suis bv. 5 str. 513]
 gi|254704489|ref|ZP_05166317.1| OmpA family protein [Brucella suis bv. 3 str. 686]
 gi|254706615|ref|ZP_05168443.1| OmpA family protein [Brucella pinnipedialis M163/99/10]
 gi|254710275|ref|ZP_05172086.1| OmpA family protein [Brucella pinnipedialis B2/94]
 gi|254714272|ref|ZP_05176083.1| OmpA family protein [Brucella ceti M644/93/1]
 gi|254717709|ref|ZP_05179520.1| OmpA family protein [Brucella ceti M13/05/1]
 gi|256031769|ref|ZP_05445383.1| OmpA family protein [Brucella pinnipedialis M292/94/1]
 gi|256044854|ref|ZP_05447758.1| OmpA family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061284|ref|ZP_05451434.1| OmpA family protein [Brucella neotomae 5K33]
 gi|256113758|ref|ZP_05454562.1| OmpA family protein [Brucella melitensis bv. 3 str. Ether]
 gi|256159939|ref|ZP_05457657.1| OmpA family protein [Brucella ceti M490/95/1]
 gi|256255170|ref|ZP_05460706.1| OmpA family protein [Brucella ceti B1/94]
 gi|256369628|ref|YP_003107138.1| OmpA family protein [Brucella microti CCM 4915]
 gi|260168903|ref|ZP_05755714.1| OmpA family protein [Brucella sp. F5/99]
 gi|260565544|ref|ZP_05836028.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260566267|ref|ZP_05836737.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
 gi|261219551|ref|ZP_05933832.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
 gi|261314075|ref|ZP_05953272.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317837|ref|ZP_05957034.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261322046|ref|ZP_05961243.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
 gi|261752512|ref|ZP_05996221.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|261755171|ref|ZP_05998880.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
 gi|261758395|ref|ZP_06002104.1| bacterial outer membrane protein [Brucella sp. F5/99]
 gi|306840330|ref|ZP_07473102.1| OmpA family protein [Brucella sp. BO2]
 gi|306844105|ref|ZP_07476699.1| OmpA family protein [Brucella sp. BO1]
 gi|23348039|gb|AAN30123.1| OmpA family protein [Brucella suis 1330]
 gi|161335970|gb|ABX62275.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
 gi|163674192|gb|ABY38303.1| OmpA/MotB domain protein [Brucella suis ATCC 23445]
 gi|225641065|gb|ACO00979.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
 gi|255999790|gb|ACU48189.1| OmpA family protein [Brucella microti CCM 4915]
 gi|260151612|gb|EEW86706.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260155785|gb|EEW90865.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
 gi|260924640|gb|EEX91208.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
 gi|261294736|gb|EEX98232.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
 gi|261297060|gb|EEY00557.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261303101|gb|EEY06598.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738379|gb|EEY26375.1| bacterial outer membrane protein [Brucella sp. F5/99]
 gi|261742265|gb|EEY30191.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|261744924|gb|EEY32850.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
 gi|306275548|gb|EFM57280.1| OmpA family protein [Brucella sp. BO1]
 gi|306289729|gb|EFM60918.1| OmpA family protein [Brucella sp. BO2]
          Length = 220

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 77  NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 189

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 190 GASQPIASNATPEGRAQNRRVEIQISPLRG 219


>gi|260597012|ref|YP_003209583.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
 gi|260216189|emb|CBA29047.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
          Length = 424

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  + +     +         MF   ++I  P+ + +++++   +      
Sbjct: 291 LKEEIARHWVSVDESPRESRVIFH---GDSMFSSGAAIVRPDRVDIIRRVAAEVRRVDGA 347

Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GHTD++P R      N  LS  RA +     +  G++ ++I+   G    +   ++
Sbjct: 348 VVIIGHTDSTPIRSGAFASNQALSEKRAEAVAAYFLAQGIAPEKITP-KGAGDTQPIASN 406

Query: 325 DPM--NSANRRIDILVE 339
                 S NRR++I V 
Sbjct: 407 HDEKGRSQNRRVEIFVT 423


>gi|26246276|ref|NP_752315.1| hypothetical protein c0378 [Escherichia coli CFT073]
 gi|26106674|gb|AAN78859.1|AE016756_42 MbhA protein [Escherichia coli CFT073]
          Length = 262

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 22  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 82  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226


>gi|312964712|ref|ZP_07778963.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
 gi|312290733|gb|EFR18611.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
          Length = 254

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 14  AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 73

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  + +   ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 74  ELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 133

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  +++   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 134 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 193

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 194 DQMLLDAKNPQSAGNRRIEIMVLTK 218


>gi|220927721|ref|YP_002504630.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
 gi|219998049|gb|ACL74650.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
          Length = 259

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             ++++ L K+I+S +     + +   V       GI+++I ++    +F   S+I  P+
Sbjct: 89  EDQQMEALEKEINSLVDS---EGLKGNVAVTMQERGIVVTINEK---ILFKSGSAIIEPK 142

Query: 248 TIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGV 304
               + KIG+ +      + I + GHTD  P ++     NW LS  RA +  ++L++ G 
Sbjct: 143 DQDTVIKIGKDILSKIPNKHIRVEGHTDNVPMKSTLYASNWELSAGRAINVLKLLVEKGG 202

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              ++     +  +   + +      + NRR+DI++   
Sbjct: 203 INPKMIHPVPYGEYSPLVPNTTDANRAKNRRVDIVILRD 241



 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/113 (9%), Positives = 33/113 (29%), Gaps = 8/113 (7%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG--------KNLMTASK 81
              + + YAD M +L+  F+V++ ++  + +  + + Q  +               ++  
Sbjct: 11  SERYLLTYADLMNLLLILFIVLYSMSQVNTEKFQQLSQSLSSAFGNGETAYVIQGGSSGN 70

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            + D                      +  ++  + S   K            +
Sbjct: 71  SLIDFPATMPSPVIPSKIEDQQMEALEKEINSLVDSEGLKGNVAVTMQERGIV 123


>gi|298206940|ref|YP_003715119.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
 gi|83849574|gb|EAP87442.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
          Length = 321

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 108/300 (36%), Gaps = 13/300 (4%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN---KIDLSIDEHIT 107
           + + +       K +E  +    +   +    +   +   E    +     D        
Sbjct: 15  LLLTSCVSSKVYKDLEGKYADVKRENRSLKDDLSKFKTSSEEFETSLDVMTDKYASLKAE 74

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
            + ++    +T Q  +  +   +    ++S+              + +D  K+   E++ 
Sbjct: 75  HDQLESDYNATKQSYESLQKSYDALEANSSKALAENSKQNRALIAELEDKKKALAEERAT 134

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
             +    L   S             +   + + + +S  + D   KG+  E     + +S
Sbjct: 135 LDKLKADLETRSNRINELESVIAAKEAKMQALKTAVSSALGDFEGKGLTVEQRNGKVYVS 194

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR--DN 284
           +    N  +F+  S     E    + ++GEVLA + ++   I GHTD  P+       DN
Sbjct: 195 M---ENKLLFNSGSWAVGSEGRRAVNQLGEVLASNPDIAVLIEGHTDNVPYGGNGPLQDN 251

Query: 285 WRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
           W LS  RA S   +L ++  +    ++   G   +    ++D     + NRRI++++  +
Sbjct: 252 WDLSTKRATSIVNILRENSQIDPQNLTAA-GRGEYLPIASNDSATGKAKNRRIEVILTPK 310


>gi|77464614|ref|YP_354118.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126463454|ref|YP_001044568.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559507|ref|ZP_08413829.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|77389032|gb|ABA80217.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126105118|gb|ABN77796.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
 gi|332277219|gb|EGJ22534.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 228

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L        V    T + +++++       +F   S+   P+    L  + + 
Sbjct: 89  LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLGAVAQN 145

Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L         + GHTD++     A  N  LS+ RA S   VL+ +GV   R+S I G   
Sbjct: 146 LLRYPNSTIAVVGHTDST---GAAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAI-GRGE 201

Query: 318 HRLKIASDP--MNSANRRIDILVE 339
            +   ++      + NRR+DI++ 
Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIR 225


>gi|251772419|gb|EES52986.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
           ferrodiazotrophum]
          Length = 285

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +    +  GI I I   +   +F    +    + I VL+ I  +L+ +   I + GHTD 
Sbjct: 104 MKVVQSSEGIRIQI---QAAFLFRTGHAAVRKQAIPVLKNIAALLSKTKRDIRVEGHTDN 160

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSAN 331
            P     ++NW LS  RA +    L+    +   R +  +G+  +R  + +        N
Sbjct: 161 VPIHGRYKNNWALSSMRAVNVLTTLIALAPIDPSR-ASAAGYGQYRPLVPNTSAENRQKN 219

Query: 332 RRIDILVEDRQ 342
           RR++I+V   +
Sbjct: 220 RRVEIVVLKEK 230



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          K    +   NL  W + YADF+T+L  FF++M+ I+A +    K +         +
Sbjct: 3  KKVKHEEHENLERWLVSYADFITLLFTFFVMMYAISAVNTGKYKVLSNAIVATFTH 58


>gi|313646638|gb|EFS11097.1| lateral flagellar motor protein B [Shigella flexneri 2a str. 2457T]
 gi|332761628|gb|EGJ91908.1| lateral flagellar motor protein B [Shigella flexneri 4343-70]
 gi|332761679|gb|EGJ91958.1| lateral flagellar motor protein B [Shigella flexneri 2747-71]
 gi|332764445|gb|EGJ94678.1| lateral flagellar motor protein B [Shigella flexneri K-671]
 gi|332768577|gb|EGJ98759.1| ompA family protein [Shigella flexneri 2930-71]
 gi|333008733|gb|EGK28197.1| lateral flagellar motor protein B [Shigella flexneri K-218]
 gi|333009709|gb|EGK29159.1| lateral flagellar motor protein B [Shigella flexneri VA-6]
 gi|333022107|gb|EGK41350.1| lateral flagellar motor protein B [Shigella flexneri K-304]
          Length = 256

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|261821136|ref|YP_003259242.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
 gi|261605149|gb|ACX87635.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
          Length = 350

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 4/203 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT  S+                +++      +  + +     + RL  L +++   +
Sbjct: 65  KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEARLNKLRERLDQLI 124

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +L E    G+ I IID +N PMF   S+   P    +L+ I  +L   
Sbjct: 125 EADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR- 319
              +SI GHTD   +        NW LS DRA ++ + L   G+S+ ++ ++ G A    
Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELTFGGLSDGKVLRVVGMAATMS 244

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
           LK A+   ++ NRRI +LV  +Q
Sbjct: 245 LKQATSGNDAINRRISLLVLSKQ 267



 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 70/177 (39%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T+     D  +P      +      +      + +++      +    R   +
Sbjct: 62  TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEARLNKLRERLD 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
               ++ +      + L    E+G  +       + + K  +  + P  ++ + A+ 
Sbjct: 122 QLIEADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178


>gi|52081472|ref|YP_080263.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
 gi|52786848|ref|YP_092677.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
 gi|52004683|gb|AAU24625.1| YtxE [Bacillus licheniformis ATCC 14580]
 gi|52349350|gb|AAU41984.1| YtxE [Bacillus licheniformis ATCC 14580]
          Length = 229

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 8/177 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S     +       K+     K +K  +     +      +  + +   +  +    G++
Sbjct: 54  SFQDRADGKSAAELKKDAGDQKAEKTAKSQDDLLKKINDYIEKNELSSLIAAKRDERGVI 113

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDN 284
           + + +     +FD   +    +   +L KI  +L   +  I + GHTD+ P        N
Sbjct: 114 LVLQEA---VLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPISTYRFPSN 170

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           W LS  RA +          +   R   I G+A  +    +   +    NRR++I++
Sbjct: 171 WELSAARASTVIGYFTSKEKLDSSRFLAI-GYADTKPVRDNRTESHMKENRRVEIVI 226



 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 36/82 (43%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          + +    +      +W I ++D +T+++ FF++++ ++  D +  KA    F        
Sbjct: 4  RHERRKREQGRKSPNWIITFSDLITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKS 63

Query: 78 TASKGIFDEQNPPERSSQNKID 99
           A           E++++++ D
Sbjct: 64 AAELKKDAGDQKAEKTAKSQDD 85


>gi|290508935|ref|ZP_06548306.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
 gi|289778329|gb|EFD86326.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
          Length = 565

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + V+ +  +    I +    +  +FD   S   P +  +L  
Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD+       + N +LSL RA +    +  +G   +    + 
Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+   R   +++     + NRR++I +  ++
Sbjct: 511 GYGASRPVASNETPDGRAQNRRVEISLVPQK 541


>gi|331656310|ref|ZP_08357272.1| MbhA protein [Escherichia coli TA206]
 gi|331054558|gb|EGI26567.1| MbhA protein [Escherichia coli TA206]
          Length = 261

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|118589219|ref|ZP_01546625.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
 gi|118437919|gb|EAV44554.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
          Length = 360

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 7/162 (4%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A +  + +   A    +      +  +      ++        I+ + +   F   S
Sbjct: 203 ARKAAEPAQSVSTDAAPKVTASQSAASTALEPEGNLDSEACTGRFEILSRTDNIYFPSGS 262

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S   P +  +L  + +++      VI + GHTD+         N  LS  RA +  Q L+
Sbjct: 263 SQLDPRSEPLLNSLVDIILRCPGLVIEVGGHTDSD---GSDTSNQLLSERRAGAVKQYLV 319

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
              + E RI  + G+   R   A+   +    NRRI+ +V +
Sbjct: 320 SKSIPESRIKSV-GYGESRPVAANTSADGKRRNRRIEFVVVE 360


>gi|108808116|ref|YP_652032.1| putative OmpA family protein [Yersinia pestis Antiqua]
 gi|108812385|ref|YP_648152.1| OmpA family protein [Yersinia pestis Nepal516]
 gi|145599315|ref|YP_001163391.1| OmpA family protein [Yersinia pestis Pestoides F]
 gi|162419405|ref|YP_001606412.1| SciP protein [Yersinia pestis Angola]
 gi|165925389|ref|ZP_02221221.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937006|ref|ZP_02225571.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008588|ref|ZP_02229486.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214237|ref|ZP_02240272.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399212|ref|ZP_02304736.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421156|ref|ZP_02312909.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424473|ref|ZP_02316226.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229838286|ref|ZP_04458445.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895433|ref|ZP_04510605.1| putative OmpA family protein [Yersinia pestis Pestoides A]
 gi|229898850|ref|ZP_04513995.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229902751|ref|ZP_04517868.1| putative OmpA family protein [Yersinia pestis Nepal516]
 gi|270490077|ref|ZP_06207151.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           KIM D27]
 gi|108776033|gb|ABG18552.1| OmpA family protein [Yersinia pestis Nepal516]
 gi|108780029|gb|ABG14087.1| putative OmpA family protein [Yersinia pestis Antiqua]
 gi|145211011|gb|ABP40418.1| OmpA family protein [Yersinia pestis Pestoides F]
 gi|162352220|gb|ABX86168.1| SciP protein [Yersinia pestis Angola]
 gi|165914869|gb|EDR33481.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922996|gb|EDR40147.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992970|gb|EDR45271.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204593|gb|EDR49073.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960645|gb|EDR56666.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051716|gb|EDR63124.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056355|gb|EDR66124.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229680198|gb|EEO76297.1| putative OmpA family protein [Yersinia pestis Nepal516]
 gi|229688398|gb|EEO80469.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229694652|gb|EEO84699.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701588|gb|EEO89615.1| putative OmpA family protein [Yersinia pestis Pestoides A]
 gi|262366676|gb|ACY63233.1| OmpA family protein [Yersinia pestis D182038]
 gi|270338581|gb|EFA49358.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
           KIM D27]
 gi|320014519|gb|ADV98090.1| putative OmpA family protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 278

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 168 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 227

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 228 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 276


>gi|224369952|ref|YP_002604116.1| MotB2 [Desulfobacterium autotrophicum HRM2]
 gi|223692669|gb|ACN15952.1| MotB2 [Desulfobacterium autotrophicum HRM2]
          Length = 244

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 8/147 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I      +V       +        ++++I       +FD  S+        +L +I  V
Sbjct: 98  IRDVNRFIVNREAPDTIKTHVLDGKVIVTIN---GQTLFDSGSANLKQGATAILDRIVAV 154

Query: 259 LAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +    E  I+I+G+TD  P        NW LS  RA +  + L++ G++  R++  +G+A
Sbjct: 155 VFEYPEYSINIKGYTDDIPIETAQFPSNWELSAIRATTVLKHLIQKGINPKRLTA-TGYA 213

Query: 317 HHRLKIAS--DPMNSANRRIDILVEDR 341
                + +  D   + NRR++ ++E +
Sbjct: 214 DMEPLVPNTSDTNRAINRRVEFVLEKK 240


>gi|209917443|ref|YP_002291527.1| hypothetical protein ECSE_0251 [Escherichia coli SE11]
 gi|209910702|dbj|BAG75776.1| putative motility protein [Escherichia coli SE11]
          Length = 262

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +   + +KK   +L 
Sbjct: 22  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 81

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 82  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 141

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 202 DQMLLDSKNPQSAGNRRIEIMVLTK 226


>gi|114777177|ref|ZP_01452188.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
 gi|114552322|gb|EAU54805.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
          Length = 212

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD  S+   P ++  L K    L     +   +  HTD+         N  LS 
Sbjct: 104 KLEGVYFDNDSAKLRPASVATLDKAVATLNRRATIKVEVAAHTDS---SGSDAYNLSLSE 160

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            RA S    L+  G+   R++   G+   +   ++      + NRR+++ V +
Sbjct: 161 RRAASVRDYLVAHGIDAARLTS-KGYGETQPIASNATKEGRAKNRRVELRVMN 212


>gi|206579667|ref|YP_002238891.1| OmpA domain protein [Klebsiella pneumoniae 342]
 gi|206568725|gb|ACI10501.1| OmpA domain protein [Klebsiella pneumoniae 342]
          Length = 567

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD    +  P +   L      +       I + GHTD+       + N  LSL 
Sbjct: 433 DSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSV---GEEKANQLLSLK 489

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S    +  +G   D    + G+   R    +D     + NRR++I +
Sbjct: 490 RAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 539


>gi|206577657|ref|YP_002237882.1| OmpA domain protein [Klebsiella pneumoniae 342]
 gi|206566715|gb|ACI08491.1| OmpA domain protein [Klebsiella pneumoniae 342]
          Length = 565

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + V+ +  +    I +    +  +FD   S   P +  +L  
Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD+       + N +LSL RA +    +  +G   +    + 
Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+   R   +++     + NRR++I +  ++
Sbjct: 511 GYGASRPVASNETPEGRAKNRRVEISLVPQK 541


>gi|168180924|ref|ZP_02615588.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
 gi|237796091|ref|YP_002863643.1| chemotaxis motB protein [Clostridium botulinum Ba4 str. 657]
 gi|182668356|gb|EDT80335.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
 gi|229263486|gb|ACQ54519.1| chemotaxis protein MotB [Clostridium botulinum Ba4 str. 657]
          Length = 247

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     S NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241


>gi|284040562|ref|YP_003390492.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283819855|gb|ADB41693.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 294

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +R   L   +  +L   + D   + V  E  +  + +SI D+    +F   S    P+  
Sbjct: 125 QRKDSLNLALVMSLKRSLDDINDQDVQVEVKKGVVYVSISDKL---LFKSGSYDITPKAE 181

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSE 306
            VL K+ +V+    +  I + GHTDA P    A +DNW LS  RA S  + L    GV+ 
Sbjct: 182 TVLGKVAKVVNDHKDLDILVEGHTDAVPISTPAIKDNWDLSALRATSVVRTLQAKFGVAP 241

Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +R++   G +    K  +        NRR +I++  +
Sbjct: 242 ERLTAG-GRSEFAPKDDNTTAVGRQQNRRTEIIITPK 277


>gi|168182734|ref|ZP_02617398.1| chemotaxis motB protein [Clostridium botulinum Bf]
 gi|182674075|gb|EDT86036.1| chemotaxis motB protein [Clostridium botulinum Bf]
          Length = 247

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++   D           +  +N+   V  +    GI+I + D     +F+   +   P++
Sbjct: 88  RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306
             ++ KI  ++A     + I GHTD  P +N     NW LS  RA +  +  ++    + 
Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            R +   G+  +R    ++     S NRR++I++  ++
Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241


>gi|30261729|ref|NP_844106.1| flagellar motor protein MotS [Bacillus anthracis str. Ames]
 gi|47526945|ref|YP_018294.1| flagellar motor protein MotS [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184555|ref|YP_027807.1| flagellar motor protein MotS [Bacillus anthracis str. Sterne]
 gi|165869455|ref|ZP_02214114.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
 gi|167633407|ref|ZP_02391732.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
 gi|167639130|ref|ZP_02397403.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
 gi|170686155|ref|ZP_02877377.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
 gi|170706447|ref|ZP_02896907.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
 gi|177650324|ref|ZP_02933291.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
 gi|190566282|ref|ZP_03019200.1| putative chemotaxis protein MotB [Bacillus anthracis
           Tsiankovskii-I]
 gi|218902843|ref|YP_002450677.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
 gi|225863587|ref|YP_002748965.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
 gi|227815517|ref|YP_002815526.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
 gi|229604338|ref|YP_002866130.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
 gi|254683216|ref|ZP_05147077.1| flagellar motor protein MotS [Bacillus anthracis str. CNEVA-9066]
 gi|254723805|ref|ZP_05185591.1| flagellar motor protein MotS [Bacillus anthracis str. A1055]
 gi|254734568|ref|ZP_05192280.1| flagellar motor protein MotS [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740977|ref|ZP_05198665.1| flagellar motor protein MotS [Bacillus anthracis str. Kruger B]
 gi|254755218|ref|ZP_05207252.1| flagellar motor protein MotS [Bacillus anthracis str. Vollum]
 gi|254759755|ref|ZP_05211779.1| flagellar motor protein MotS [Bacillus anthracis str. Australia 94]
 gi|30255957|gb|AAP25592.1| putative chemotaxis protein MotB [Bacillus anthracis str. Ames]
 gi|47502093|gb|AAT30769.1| putative chemotaxis protein MotB [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49178482|gb|AAT53858.1| chemotaxis protein MotB, putative [Bacillus anthracis str. Sterne]
 gi|164714895|gb|EDR20413.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
 gi|167512920|gb|EDR88293.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
 gi|167531445|gb|EDR94123.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
 gi|170128545|gb|EDS97412.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
 gi|170669852|gb|EDT20593.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
 gi|172083468|gb|EDT68528.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
 gi|190562417|gb|EDV16384.1| putative chemotaxis protein MotB [Bacillus anthracis
           Tsiankovskii-I]
 gi|218535723|gb|ACK88121.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
 gi|225787259|gb|ACO27476.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
 gi|227002562|gb|ACP12305.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
 gi|229268746|gb|ACQ50383.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
          Length = 225

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|153948417|ref|YP_001399654.1| hypothetical protein YpsIP31758_0662 [Yersinia pseudotuberculosis
           IP 31758]
 gi|152959912|gb|ABS47373.1| flagellar motor protein B [Yersinia pseudotuberculosis IP 31758]
          Length = 303

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 4/230 (1%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           + + S  ++++     N     +          S +   +    +      +++ +    
Sbjct: 50  VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAI 109

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    + +  K +  +++L++ I    S     N    +  E    G+ I I D  
Sbjct: 110 EVPEPEQSLEEVVDKSRNEMEELSRIIMQITSAY---NAQSNLQMEVVPQGLRILIQDDL 166

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291
              MF +SS++  P    +L ++          I I GHTDAS +R+    +NW LS +R
Sbjct: 167 QRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNKIIITGHTDASRYRDQLLYNNWNLSGER 226

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A  A++ L+  G+ + R+ +I+  A   L   +DP+ + NRRI+I+V  +
Sbjct: 227 ALMAHKALVSGGLDKGRVLQINAMADQMLLDPTDPLAAKNRRIEIMVLTK 276



 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
            +       IIK+         + G+WK+ +ADF   +MA F+V+WI+    ++ ++ I 
Sbjct: 3   NHASGGATTIIKRANRKKHHARHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              N        +   I  +         N ID       TK+++ +++    Q 
Sbjct: 63  AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAIEVPEPEQS 117


>gi|255068383|ref|ZP_05320238.1| OmpA family protein [Neisseria sicca ATCC 29256]
 gi|255047376|gb|EET42840.1| OmpA family protein [Neisseria sicca ATCC 29256]
          Length = 421

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 73/179 (40%), Gaps = 9/179 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           ++ S+  + +     ++  K+ ++  K++      ++   L   +A  +   V  E  + 
Sbjct: 217 MQWSLGDDFDVASTKVNNLKLPSVTAKQQETQSTVRLRPLLENEIARKL---VSVEDFQD 273

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281
              ++I+      +F+  S+    +   VL ++ + L      I + G+TD  P ++   
Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDNQPIQSLNF 330

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             NW LS  RA +  ++L+    +     +  G         +D     + NRR++I +
Sbjct: 331 PSNWHLSQARADAVKEILLNYIKNGGVRIRSEGRGSTDPVAPNDTLENRAKNRRVEITL 389


>gi|229058360|ref|ZP_04196744.1| OmpA/MotB domain protein [Bacillus cereus AH603]
 gi|229166569|ref|ZP_04294321.1| OmpA/MotB domain protein [Bacillus cereus AH621]
 gi|228616823|gb|EEK73896.1| OmpA/MotB domain protein [Bacillus cereus AH621]
 gi|228719869|gb|EEL71459.1| OmpA/MotB domain protein [Bacillus cereus AH603]
          Length = 225

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N V  V      TG+ I I+D     +FD
Sbjct: 64  PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   V+ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +   ++D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVASNDSPQNWEKNRRVVIYIKE 225


>gi|331671759|ref|ZP_08372555.1| OmpA family membrane protein [Escherichia coli TA280]
 gi|331070748|gb|EGI42107.1| OmpA family membrane protein [Escherichia coli TA280]
          Length = 438

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  E       +     R   MF             V+ K    +A     
Sbjct: 305 LANEIARGLLTVEEDDHHSRVIF---RGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA 361

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   G+   RI ++ G         +
Sbjct: 362 VTVTGHTDSQPIHSAEFPSNQVLSEKRAAEVASLLTSGGIPASRI-RVVGKGDTVPVADN 420

Query: 325 --DPMNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 421 RTKTGRAQNRRVEILVVE 438


>gi|261365147|ref|ZP_05978030.1| OmpA family protein [Neisseria mucosa ATCC 25996]
 gi|288566399|gb|EFC87959.1| OmpA family protein [Neisseria mucosa ATCC 25996]
          Length = 421

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 15/182 (8%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           ++ S+  + +     ++  K+ ++  K++      ++   L   +A  +   V  E  + 
Sbjct: 217 MQWSLGDDFDTASTKVNNLKLPSVTAKQQETQGTIRLRPLLENEIARKL---VSVEDFQD 273

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281
              ++I+      +F+  S+    +   VL ++ + L      I + G+TD  P ++   
Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDDKPIQSLNF 330

Query: 282 RDNWRLSLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
             NW LS  RA +  ++L   +K+G    RI    G         +D     + NRR++I
Sbjct: 331 PSNWHLSQARADAVKEILLNYIKNG--GTRIRS-EGRGSTDPVAPNDTLENRAKNRRVEI 387

Query: 337 LV 338
            +
Sbjct: 388 TL 389


>gi|331269325|ref|YP_004395817.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
 gi|329125875|gb|AEB75820.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
          Length = 242

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 8/151 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                     +  + +   V  +    GI+I + D     +FD + +     +  +L KI
Sbjct: 92  EAMYGKVKEFMDKNKLDNTVQVKRDARGIIIELKDN---ILFDSAQAEIKAPSKEILDKI 148

Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313
             +L      I I GHTD  P  N     NW LS  RA +  +  ++  G++ D+     
Sbjct: 149 SRLLESVPNGIIIEGHTDNVPIHNTKYESNWELSTQRAVNVLKYFVESKGLAPDKFQAA- 207

Query: 314 GFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           G+        +D     + NRR++IL+   +
Sbjct: 208 GYGEFHPIEKNDNYADRAKNRRVNILITASE 238



 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++     +      W   YAD +T+L+ FF++++  ++ D      I            +
Sbjct: 3   RRKKAQQSEGGGEEWLQTYADTITLLLTFFVLLYASSSIDAVKFNKISSSLQSVLSGSNS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
            S   F+           +          +
Sbjct: 63  NSILDFNSNGEVPIVGPPQEMGPKSGGGNE 92


>gi|218688122|ref|YP_002396334.1| hypothetical protein ECED1_0264 [Escherichia coli ED1a]
 gi|218425686|emb|CAR06478.1| flagellar system protein [Escherichia coli ED1a]
          Length = 296

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 56  AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260


>gi|332341583|gb|AEE54917.1| lateral flagellar motor protein B LafU [Escherichia coli UMNK88]
          Length = 256

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        S    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|152970821|ref|YP_001335930.1| hypothetical protein KPN_02274 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150955670|gb|ABR77700.1| putative exported protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 565

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + V+ +  +    I +    +  +FD   S   P +  +L  
Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD+       R N +LSL RA +    +  +G   +    + 
Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+   R   +++     + NRR++I +  ++
Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541


>gi|94970509|ref|YP_592557.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552559|gb|ABF42483.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 264

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 2/153 (1%)

Query: 189 KKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K  + +L +++   +  +   + + K +    T  G+ I +++      FD  S+ P   
Sbjct: 84  KDNMPELKEQLQRAIRKMNNFEQLKKQIEITVTSEGLRIELLESAAGTFFDSGSARPNDS 143

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L+ +   L +    ISI GHTD+ PF    +  NW LS DRA +A +++  SGV  
Sbjct: 144 GKELLEMLAHELQNLPNTISIEGHTDSKPFVGNGSYSNWELSADRANAARRLMQDSGVRG 203

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++S++ GFA   L+    P + +NRRI ILV+
Sbjct: 204 NQVSQVRGFADQNLRKKDAPEDPSNRRITILVQ 236



 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MA F+V+W++N +     +AI  YF                      
Sbjct: 23  AWKVAYADFVTAMMALFIVLWLMNTSKPVK-EAISGYFKDPSGTAKKTGSAQSGTGENFT 81

Query: 92  RSSQNKIDLSID 103
            +  N  +L   
Sbjct: 82  ITKDNMPELKEQ 93


>gi|237740698|ref|ZP_04571179.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
 gi|229422715|gb|EEO37762.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
          Length = 340

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 10/286 (3%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
           +      + +    NP  K  +  +K I           + +    +D   +        
Sbjct: 59  SITIPEIQNLSVSENPDAKITLDMTKKISSVPGITISPVKVENGNIVDGSYSMQIGKNGD 118

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G    K     L+ +         +++       +    +    + ++  + +    Y  
Sbjct: 119 GQYINKVTGVILQVDKDGTGLYTDNKNNIKIYVGEI-NARYESPNVEIINNGDGSGTYTD 177

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              +       K K ++    +        L     ++ V    +     + I       
Sbjct: 178 KSKNLVIENDGKGKAKITFNGQTTEVDAKPLEKPGKLEMVPPVPSIEANSLLITSDSG-I 236

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD       PE   VL+ +  VL     +   I G+TD+         N  LS  RA S
Sbjct: 237 LFDVDKYDVRPEDKEVLKNLATVLKEMNVKNFEIDGYTDSD---GSDEHNQVLSEKRANS 293

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               L+  GV+ +      G+   +   ++D       NRR++I++
Sbjct: 294 VKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGRQKNRRVEIII 337


>gi|65318994|ref|ZP_00391953.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012]
 gi|228933012|ref|ZP_04095875.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826613|gb|EEM72384.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 227

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|46202032|ref|ZP_00053894.2| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 274

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 87/265 (32%), Gaps = 19/265 (7%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK- 153
           Q K + +++  +  +  + +         +Q +   +      +     +  ++ +    
Sbjct: 11  QTKANAALEAELMSSRAEKEKMEAWAAGVHQDMAALLALKDEKEAELAAEKKISDEGRAQ 70

Query: 154 ----GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                + +    +    +    +       ++K       KRL          L    ++
Sbjct: 71  LALLNQQIAAMREELARVTAALDASEARDKEQKAQIADLGKRLNVALAGKVEELQKYRSE 130

Query: 210 NIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPETIVVLQKIGEVLAH------ 261
              +         GI I           +F   S+   PE +  + ++   L        
Sbjct: 131 FFGRLRKVLGDHPGIRIEGDRFIFQSELLFATGSADLGPEGVEQVGRLAATLKDIAKTMP 190

Query: 262 --STEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                V+ I GHTD  P        NW LS  RA +  + L  +GV +DR+   +GF   
Sbjct: 191 KGVNWVLRIDGHTDRRPMVSGRYPSNWELSTARAITVLRTLAANGVPKDRL-AAAGFGEF 249

Query: 319 RLK--IASDPMNSANRRIDILVEDR 341
           +      ++   + NRRI+I  + R
Sbjct: 250 QPVDPADNEAAYAKNRRIEIRFDQR 274


>gi|331675914|ref|ZP_08376631.1| putative motility protein [Escherichia coli H591]
 gi|331076474|gb|EGI47751.1| putative motility protein [Escherichia coli H591]
          Length = 261

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +   + +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225


>gi|107100485|ref|ZP_01364403.1| hypothetical protein PaerPA_01001510 [Pseudomonas aeruginosa PACS2]
          Length = 188

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   SS         L  I E L    ++  +SI GHTD+         N +LS  RA +
Sbjct: 83  FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 139

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
               L+ +GV    I  + G    +    +      + NRR++IL++ 
Sbjct: 140 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIKR 187


>gi|254719262|ref|ZP_05181073.1| OmpA family protein [Brucella sp. 83/13]
 gi|265984261|ref|ZP_06096996.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
 gi|306838013|ref|ZP_07470871.1| OmpA family protein [Brucella sp. NF 2653]
 gi|264662853|gb|EEZ33114.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
 gi|306406937|gb|EFM63158.1| OmpA family protein [Brucella sp. NF 2653]
          Length = 220

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A +   GV        I++++        FD        +    L  + 
Sbjct: 77  NYMDRQEAELRAQSQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 189

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 190 GASQPIASNATPEGRAQNRRVEIQISPLRG 219


>gi|62290115|ref|YP_221908.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700038|ref|YP_414612.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
           2308]
 gi|189024353|ref|YP_001935121.1| outer membrane protein [Brucella abortus S19]
 gi|254689424|ref|ZP_05152678.1| Bacterial outer membrane protein [Brucella abortus bv. 6 str. 870]
 gi|254697559|ref|ZP_05159387.1| Bacterial outer membrane protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730453|ref|ZP_05189031.1| Bacterial outer membrane protein [Brucella abortus bv. 4 str. 292]
 gi|256257670|ref|ZP_05463206.1| Bacterial outer membrane protein [Brucella abortus bv. 9 str. C68]
 gi|260546663|ref|ZP_05822402.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
 gi|260754947|ref|ZP_05867295.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
           870]
 gi|260758163|ref|ZP_05870511.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
           292]
 gi|260761989|ref|ZP_05874332.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62196247|gb|AAX74547.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616139|emb|CAJ11182.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
           [Brucella melitensis biovar Abortus 2308]
 gi|189019925|gb|ACD72647.1| Bacterial outer membrane protein [Brucella abortus S19]
 gi|260095713|gb|EEW79590.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
 gi|260668481|gb|EEX55421.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
           292]
 gi|260672421|gb|EEX59242.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675055|gb|EEX61876.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
           870]
          Length = 220

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 77  NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 189

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +  +++      + NRR++I +   +G
Sbjct: 190 GASQPIVSNATPEGRAQNRRVEIQISPLRG 219


>gi|325918947|ref|ZP_08181016.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325534834|gb|EGD06761.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 365

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 19/252 (7%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217
               +       +P               +      +     G+   +            
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPASQPGQTI 238

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 + +SI        FD + S   P+   +L +  E+L    +  + + GHTD+  
Sbjct: 239 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKVEVAGHTDS-- 294

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
            +     N +LS  RA + Y  L K+GV   R+    G+   R    +            
Sbjct: 295 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 353

Query: 329 SANRRIDILVED 340
           + NRR ++ V++
Sbjct: 354 AKNRRTELNVQN 365


>gi|21241777|ref|NP_641359.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|294627877|ref|ZP_06706456.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666871|ref|ZP_06732103.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|21107151|gb|AAM35895.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|292597791|gb|EFF41949.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603388|gb|EFF46807.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 365

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178

Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +       +P                      L D    +++           + +
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     + I +        FD + S   P+ + +L +  E+L    +  + + GHTD+
Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS 294

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326
              +     N +LS  RA + Y  L K+GV   R+    G+   R    +          
Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351

Query: 327 MNSANRRIDILVED 340
             + NRR ++ V++
Sbjct: 352 GRAKNRRTELNVQN 365


>gi|206603127|gb|EDZ39607.1| Putative flagellar motor protein (OmpA/MotB) [Leptospirillum sp.
           Group II '5-way CG']
          Length = 261

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           K   ++Q +  +    L    ++     V+       + I      +  +F    +    
Sbjct: 78  KASPQVQSVMIQAMQLLVQKSSEKGDMKVVQTKEGIVLRIQ-----SRFLFASGHARVRR 132

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-V 304
           + + VL+KI  +LA +   I + G+TD  P R      NW LS  RA +    L++ G +
Sbjct: 133 KAVPVLRKIAALLARTNHEIRVHGYTDNQPIRTSRYPSNWALSTMRAVNVLTRLLEYGSI 192

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              R+    GF   R   ++        NRR++IL+ +R+
Sbjct: 193 DPGRMGAA-GFGKFRPIASNLTPEGREKNRRVEILIMNRE 231



 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          K    +   NL  W + YADF+T+L AFF++++ I + +    + +         +
Sbjct: 3  KKPRHEEHENLERWLVSYADFITLLFAFFVMLYAIASVNTGKFRVLSNAIVAAFTH 58


>gi|56421066|ref|YP_148384.1| flagellar motor protein MotB [Geobacillus kaustophilus HTA426]
 gi|56380908|dbj|BAD76816.1| motility protein B (flagellar motor rotation) [Geobacillus
           kaustophilus HTA426]
          Length = 259

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 10/208 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+     ++         D     +      ++E           ++  K K+ L  +  
Sbjct: 47  QEIARAFSTAFAGGTGVLDFQSPIEPITPPAQDEEGRHQAKQPSPVVNGKEKEELGQIKA 106

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           KI S +     + +   +    T  G+ I+I+D     +FD  S+    +   +  +I  
Sbjct: 107 KIDSYIHD---NKLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRRLAAEISA 160

Query: 258 VL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L  +    I I GHTD  P  N     NW LS+ RA +  +VL+++   + R     G+
Sbjct: 161 LLVMNPPRNIIISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGY 220

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++   ++        NRR++IL+  R
Sbjct: 221 GEYKPIASNATAAGRMKNRRVEILILPR 248


>gi|312795362|ref|YP_004028284.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
 gi|312167137|emb|CBW74140.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
          Length = 224

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + L    E V  + GHTD++      R N  LS +
Sbjct: 111 PSSVSFDTNSYAIKPSFTPVLDQVAQTLTQHPELVAHVVGHTDST---GQPRYNQMLSQE 167

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S  Q L   GV+  R+    G    +    +      + NRR++I +  
Sbjct: 168 RAQSVAQYLALHGVAAQRL-AAEGRGQSQPIADNSTEAGRAQNRRVEIYLRA 218


>gi|108757340|ref|YP_635150.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
 gi|108461220|gb|ABF86405.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
          Length = 295

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 10/229 (4%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           +              S    +   +++     +  + L         +  E+        
Sbjct: 38  RGTSQAEALAEQSRQSALDAATRARDAEAARLQLEQKLAALEAERAQLATEKEQLSSEKE 97

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +      +++  L  L          + A+     +        I + ++D+    +FD 
Sbjct: 98  QLSQTVQEQEAELAKLKATYDDLQDKMKAEIAEGAIRLSHAEGRIQVDLVDK---VLFDS 154

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR----NIARDNWRLSLDRAYS 294
             +        VL ++G VLA   +  I + GHTD SP      +    NW LS+ RA +
Sbjct: 155 GDASISARGQEVLTRLGSVLAKVEDKSIQVSGHTDDSPPSQKLQSTFPSNWELSVARAVN 214

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             + L  +G    R    +G+   R    +      + NRRI++L+   
Sbjct: 215 VVRFLQDTGGVPARRLVAAGYGQMRPVSTNATPLGRARNRRIEVLLMPD 263


>gi|86143638|ref|ZP_01062014.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
           MED217]
 gi|85829681|gb|EAQ48143.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
           MED217]
          Length = 461

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 67/269 (24%), Gaps = 26/269 (9%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +    + G+ +    P+       D            +               E+    +
Sbjct: 215 DECPETPGLPEFNGCPDTDGDGIKDSEDACPEVAGLPEFNGCPDTDGDGIPDNEDACPDV 274

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +    +  C ++        +D C +     S N                         D
Sbjct: 275 AGPAATNGCPDADGDGVIDSEDECPNEAGPASNNGCPFADADGDGVADKD--------DD 326

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                    +    +     +            +  +    +FD   +     +   L +
Sbjct: 327 CPNVAGPASNNGCPEVDASVLEV----------LNGEAGRILFDTDKATIRTSSYETLAR 376

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312
           I  ++         + GH D+         N  LS  RA S    L    GV+  ++  I
Sbjct: 377 IASIVKEYPTASFEVEGHADSR---ASNAYNMDLSERRAQSVVDYLTSKEGVNASQL-SI 432

Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVE 339
             +   +    +        NRR+ + +E
Sbjct: 433 KAYGEEQPIAPNTTAAGMQLNRRVKLTLE 461


>gi|168750213|ref|ZP_02775235.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
 gi|168763471|ref|ZP_02788478.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
 gi|168770028|ref|ZP_02795035.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
 gi|168782991|ref|ZP_02807998.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
 gi|168789703|ref|ZP_02814710.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
 gi|168800332|ref|ZP_02825339.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
 gi|187776213|ref|ZP_02801137.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
 gi|189402400|ref|ZP_02782265.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
 gi|194432761|ref|ZP_03065046.1| putative chemotaxis protein [Shigella dysenteriae 1012]
 gi|195938633|ref|ZP_03084015.1| hypothetical protein EscherichcoliO157_19762 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807047|ref|ZP_03249384.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
 gi|208811824|ref|ZP_03253153.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
 gi|208818543|ref|ZP_03258863.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
 gi|209397836|ref|YP_002268857.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
 gi|217325834|ref|ZP_03441918.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
 gi|254791390|ref|YP_003076227.1| hypothetical protein ECSP_0264 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223715|ref|ZP_05937996.1| hypothetical protein EscherichiacoliO157_03796 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255876|ref|ZP_05948409.1| hypothetical protein EscherichiacoliO157EcO_08593 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|187768449|gb|EDU32293.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015577|gb|EDU53699.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
 gi|188999606|gb|EDU68592.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
 gi|189355696|gb|EDU74115.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
 gi|189361036|gb|EDU79455.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
 gi|189366384|gb|EDU84800.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
 gi|189370768|gb|EDU89184.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
 gi|189377329|gb|EDU95745.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
 gi|194419023|gb|EDX35107.1| putative chemotaxis protein [Shigella dysenteriae 1012]
 gi|208726848|gb|EDZ76449.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
 gi|208733101|gb|EDZ81788.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
 gi|208738666|gb|EDZ86348.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
 gi|209159236|gb|ACI36669.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
 gi|217322055|gb|EEC30479.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
 gi|254590790|gb|ACT70151.1| chemotaxis motB protein [Escherichia coli O157:H7 str. TW14359]
 gi|320190216|gb|EFW64866.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. EC1212]
 gi|320638165|gb|EFX07914.1| hypothetical protein ECO5101_07089 [Escherichia coli O157:H7 str.
           G5101]
 gi|320654674|gb|EFX22675.1| hypothetical protein ECO7815_10457 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660242|gb|EFX27752.1| hypothetical protein ECO5905_08983 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320665008|gb|EFX32118.1| hypothetical protein ECOSU61_13992 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326338763|gb|EGD62582.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. 1044]
 gi|326342450|gb|EGD66230.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
           str. 1125]
 gi|332097320|gb|EGJ02301.1| lateral flagellar motor protein B [Shigella dysenteriae 155-74]
          Length = 256

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|332704885|ref|ZP_08424973.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332555034|gb|EGJ52078.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 222

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    S L       GV        I++++        FD  S+   P+   VL  +  
Sbjct: 80  YMDYQESKLRQRLQGTGVSVTRQGDMIILNM---PGNVTFDTGSAGIKPQFFEVLNSVAI 136

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL       + + GHTD++        N RLS DRA S  Q L+  GV ++R   + G  
Sbjct: 137 VLKEYEKTYVDVLGHTDST---GSMNLNMRLSQDRAQSVAQYLISQGVQQERFL-VRGMG 192

Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339
            ++    +        NRR++I + 
Sbjct: 193 PNQPIADNSTAAGRSQNRRVEIKLT 217


>gi|228984812|ref|ZP_04144984.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775010|gb|EEM23404.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 225

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDAEQVDAKIMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|193068683|ref|ZP_03049644.1| putative chemotaxis protein [Escherichia coli E110019]
 gi|192958046|gb|EDV88488.1| putative chemotaxis protein [Escherichia coli E110019]
          Length = 256

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLNNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|120552993|ref|YP_957344.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120322842|gb|ABM17157.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 277

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 86/265 (32%), Gaps = 10/265 (3%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
                P +++   K            +  L           +        ++NS      
Sbjct: 1   MQPARPLKKNRGKKGTPDWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMSLAFG 60

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISS 201
            +++  +   G  +        S+ +             E+    + ++    +      
Sbjct: 61  SSNVVAEDVGGSPITLVESDTVSLPEPSESLQQQPEFIDERTERSETRQIPGGVLDLAGR 120

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +  L  +   + +        ++I   ++     F    +   PE I +++++  VL+ 
Sbjct: 121 LVRELEEEVASETLHVNYDEDQVVIRFSEEAT---FRSGDATIKPEMIPIIERVVSVLSA 177

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
            +  + + GH+D  P  +     NW LS  RA S    L+    +  +R+    G A  R
Sbjct: 178 CSGDVVVSGHSDDRPISSSQYRSNWDLSAARAVSVVHELVLNRDIPAERVVAA-GRAETR 236

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
               +      + NRR++I + + +
Sbjct: 237 PLAPNTSPENRAINRRVEIAIRNPE 261



 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 5/148 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG----- 73
           + +  +        W + +AD  T+L+ FF+++      D +  +A+    +        
Sbjct: 5   RPLKKNRGKKGTPDWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMSLAFGSSNV 64

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
                    I   ++      +    L           +                  +  
Sbjct: 65  VAEDVGGSPITLVESDTVSLPEPSESLQQQPEFIDERTERSETRQIPGGVLDLAGRLVRE 124

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKST 161
           L     SE    +   D    +   ++T
Sbjct: 125 LEEEVASETLHVNYDEDQVVIRFSEEAT 152


>gi|321312511|ref|YP_004204798.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
 gi|320018785|gb|ADV93771.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
          Length = 242

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 76/197 (38%), Gaps = 11/197 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D +K K    S   E +  + +   +   +       K++ +   L KK+++ +     +
Sbjct: 49  DLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQDQLLKKVNTYIKD---N 105

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++   +  +    G+++ + +     +FD   +  L     +L +I  +L      I + 
Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327
           GHTD+          NW LS  RA    Q       +   R   + G+A  +    +   
Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221

Query: 328 N--SANRRIDILVEDRQ 342
                NRR++I+++  +
Sbjct: 222 EHMKENRRVEIVIKKSK 238



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++        +  SW + + D +T+++ FF++++ ++  D    KA        G  L  
Sbjct: 10  RRNGSGKNSQSSSSWMVTFTDLITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQP 69

Query: 79  ASKGIFDEQNPPERSSQNKIDLSI 102
               I  +   P  + + +     
Sbjct: 70  DQTSIEKKNTSPSDTKKQEDQQDQ 93


>gi|148559799|ref|YP_001259124.1| OmpA family protein [Brucella ovis ATCC 25840]
 gi|148371056|gb|ABQ61035.1| OmpA family protein [Brucella ovis ATCC 25840]
          Length = 243

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 212

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 213 GASQPIASNATPEGRAQNRRVEIQISPLRG 242


>gi|187929665|ref|YP_001900152.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
 gi|309781567|ref|ZP_07676302.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
 gi|187726555|gb|ACD27720.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
 gi|308919672|gb|EFP65334.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
          Length = 209

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + + L    E   ++ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAVIKPSFRGPLDSVAQTLTQHPELAANVVGHTDST---GNPNYNLTLSQK 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R+S   G   ++    +      + NRR++I ++  QG
Sbjct: 156 RAQSVASYLTDRGVARNRLSA-EGRGQNQPVADNATEAGRAQNRRVEIYLKPIQG 209


>gi|110640466|ref|YP_668194.1| hypothetical protein ECP_0259 [Escherichia coli 536]
 gi|191171446|ref|ZP_03032995.1| putative chemotaxis protein [Escherichia coli F11]
 gi|110342058|gb|ABG68295.1| putative chemotaxis membrane protein [Escherichia coli 536]
 gi|190908380|gb|EDV67970.1| putative chemotaxis protein [Escherichia coli F11]
 gi|312944854|gb|ADR25681.1| hypothetical protein NRG857_01255 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|320197285|gb|EFW71901.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327]
          Length = 256

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ E+++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|317407354|gb|EFV87320.1| OmpA-family protein [Achromobacter xylosoxidans C54]
          Length = 332

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 9/216 (4%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                    +   S   K     D E  +    +     +            +       
Sbjct: 86  FPEPGETQVDIVGSLAAKGLPAYDGEYAEFDMPAIPASWAEPTAPAATASAAADAADSDG 145

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +   +     K  S    GL        V+         IS     N  +F    +   P
Sbjct: 146 EVVAQAAPPLKAPSKESLGLADLGNSVDVIINEQSVSFRIS-----NELLFPSGQATLSP 200

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305
             + V++++  +L  +   +S+ GH+D  P +      NW LS  RA S  + L++ GV+
Sbjct: 201 SGLDVIKRLAAILNKNDYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVA 260

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             R+  + G+A  R   ++D     +ANRR++++++
Sbjct: 261 GSRLRAV-GYAETRPIESNDTPAGRAANRRVELIMD 295


>gi|257871284|ref|ZP_05650937.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
 gi|257805448|gb|EEV34270.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
          Length = 254

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 8/182 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N  +       ++ +  +++ +   Q L K        L +  +           G+ 
Sbjct: 73  ETNTGKKAPTSTEAQAQEASVRTQLENQQLQKISDQLSQELASSGLKDQTEVRLESDGLH 132

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282
           I++    ++ +F   S+     T   L  + + L    T  I I GHTD  P +     +
Sbjct: 133 ITL---ASSILFTSGSAEITATTRQSLDLLSDSLKKLKTNKIVIAGHTDNVPEKGNGRYQ 189

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            NW LS  RA +  +  +  G   ++ + I  FA    K  ++     S NRR++++++ 
Sbjct: 190 SNWDLSSARAINVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249

Query: 341 RQ 342
            +
Sbjct: 250 TE 251



 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 52/122 (42%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W + Y+D +T+L+A F+VM+ +   DD+  + I   F     +  ++
Sbjct: 2   KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIRSEFGTILSSHHSS 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  I    +  E ++  K   S +    + SV  ++ +   +K   +L   +       Q
Sbjct: 62  SSVIGSVIDMGETNTGKKAPTSTEAQAQEASVRTQLENQQLQKISDQLSQELASSGLKDQ 121

Query: 140 SE 141
           +E
Sbjct: 122 TE 123


>gi|77457448|ref|YP_346953.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77381451|gb|ABA72964.1| putative OmpA family protein [Pseudomonas fluorescens Pf0-1]
          Length = 240

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283
           +I++ D     +FD   S   P     L  + + L ++  V I + GHTD+   +     
Sbjct: 127 VITLND-AGNVLFDFDKSDLKPAAKSQLDTLMDKLRNADVVSIKVIGHTDS---KGSDAY 182

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           N  LS  RA S  + L+  G++ ++++   G         ++     + NRR+++ +  
Sbjct: 183 NQALSERRASSVAEYLLSQGLAPNKLTS-EGRGESEPVADNNTDEGRAQNRRVELHINR 240


>gi|163939534|ref|YP_001644418.1| flagellar motor protein MotS [Bacillus weihenstephanensis KBAB4]
 gi|163861731|gb|ABY42790.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
          Length = 227

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N V  V      TGI I I+D     +FD
Sbjct: 66  PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGISIVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   V+ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNENFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +   ++D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVASNDSPQNWEKNRRVVIYIKE 227


>gi|290474940|ref|YP_003467824.1| flagellar protein [Xenorhabdus bovienii SS-2004]
 gi|289174257|emb|CBJ81046.1| enables flagellar motor rotation, linking torque machinery to cell
           wall [Xenorhabdus bovienii SS-2004]
          Length = 333

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 10/205 (4%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202
              +  +         +          +         + + + K K+RL  L +++    
Sbjct: 65  PLQVAINQGPQSSDSTNPIPGGGDEVFQQDGEVFRESKLVESNKEKRRLNRLHQQLDQLI 124

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++      +   +L +    G+ I IID+ N PMF   S+        +LQ I  +L   
Sbjct: 125 ITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMRDILQAIAPILNEI 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-- 318
              +S+ GHTD   + N      NW LS DRA ++ + L+  G+ E +I ++ G A    
Sbjct: 185 PNKVSLSGHTDNLQYANGQRGYSNWELSADRANASRRELLNGGLDEVKILRVVGMASTVS 244

Query: 319 --RLKIASDPMNSANRRIDILVEDR 341
             +    + P+   NRRI I+V ++
Sbjct: 245 MQKGIDPNAPV---NRRISIVVLNK 266



 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 41/95 (43%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N+  +I  KK       +  GSWKI YADFMT +MAFFLVMW+++        +I  Y
Sbjct: 2   RANNVTVIRVKKRKKHGEKHCGGSWKIAYADFMTAMMAFFLVMWLLSIASPQELTSIADY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           F    +  +       D  NP             +
Sbjct: 62  FRTPLQVAINQGPQSSDSTNPIPGGGDEVFQQDGE 96


>gi|229155299|ref|ZP_04283410.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
 gi|228628224|gb|EEK84940.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
          Length = 213

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L  +        S     +  K L K +D+E+   K     +P +S EK    
Sbjct: 3   TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDVEQVDAKIMENTIPDISHEKNDEK 62

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
              K+      ++   L   V +N +  V      TG+ + IID     +FD   +   P
Sbjct: 63  MISKK---RMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIIDNL---IFDTGDANVKP 116

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGV 304
           E   ++ ++          I + GHTD+ P  N     NW LS  RA +    L++   V
Sbjct: 117 EAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNV 176

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 177 DDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213


>gi|167950042|ref|ZP_02537116.1| flagellar motor protein MotB [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 151

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 8/139 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  ET  T I+I I ++     F    +   P    V+ KI +V+A +   
Sbjct: 2   LDKEIDEGMLEVETEATKIIIRIQEK---GSFGSGRATLNPGFFDVISKITKVIASTPGK 58

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIA 323
           + + GHTD  P      R NW LS DRA +    +L   G+   R+  + G A     + 
Sbjct: 59  VVVAGHTDDIPISTKRFRSNWELSSDRAVTVVHAMLSNHGLDPSRV-SVEGHADSSPLVP 117

Query: 324 SDP--MNSANRRIDILVED 340
           +D     + NRR+++++E 
Sbjct: 118 NDSWANRAKNRRVELIIER 136


>gi|49480957|ref|YP_035848.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52143729|ref|YP_083099.1| flagellar motor protein MotS [Bacillus cereus E33L]
 gi|196033392|ref|ZP_03100804.1| putative chemotaxis protein MotB [Bacillus cereus W]
 gi|196039124|ref|ZP_03106431.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
 gi|196045046|ref|ZP_03112279.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
 gi|49332513|gb|AAT63159.1| chemotaxis motB protein, OmpA family [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51977198|gb|AAU18748.1| chemotaxis motB protein, OmpA family [Bacillus cereus E33L]
 gi|195993826|gb|EDX57782.1| putative chemotaxis protein MotB [Bacillus cereus W]
 gi|196024048|gb|EDX62722.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
 gi|196030269|gb|EDX68869.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
          Length = 225

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|21230404|ref|NP_636321.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769602|ref|YP_244364.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992813|ref|YP_001904823.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111963|gb|AAM40245.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574934|gb|AAY50344.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734573|emb|CAP52783.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           campestris]
          Length = 365

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 75/252 (29%), Gaps = 19/252 (7%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217
               +       +P               +      +     G+   +            
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPTSQPGQTI 238

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 + +SI        FD + S   P+ + +L +  E+L    +  + + GHTD+  
Sbjct: 239 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS-- 294

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
            +     N +LS  RA + Y  L K+GV   R+    G+   R    +            
Sbjct: 295 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 353

Query: 329 SANRRIDILVED 340
           + NRR ++ V++
Sbjct: 354 AKNRRTELNVQN 365


>gi|241663775|ref|YP_002982135.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
 gi|240865802|gb|ACS63463.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
          Length = 209

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + + L    E   ++ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAVIKPSFRGPLDSVAQTLTQHPELAANVVGHTDST---GNPNYNMTLSQK 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R+S   G   ++    +      + NRR++I ++  QG
Sbjct: 156 RAQSVASYLTDRGVARNRLSA-EGRGQNQPVADNATEAGRAQNRRVEIYLKPIQG 209


>gi|255533611|ref|YP_003093983.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255346595|gb|ACU05921.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 440

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 24/205 (11%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL---------- 203
              +  + D      +  N     L  +K    + +  + DL K                
Sbjct: 239 HNPVALTYDEALQAKQTANALKSDLDAQKAENARLRTEMNDLLKDSDGDGVADKLDKCPG 298

Query: 204 --SGLVADNIVKGVLFETTRTGILIS------IIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             +G+V D     +        I+I+      + D      FD   +    ++   L ++
Sbjct: 299 TPAGVVVDGSGCPLKVPAPVEKIIITEADRKVVADAIKNLEFDLGKATIRQKSYATLNRV 358

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            E+L      + + GHTD +     A  N RLS DRA S    L+  G +  RI   +G+
Sbjct: 359 AELLIQKNFSLKLAGHTDNT---GSAALNMRLSKDRAESVKAYLVSQGANASRIEA-TGY 414

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
             ++   ++        NRR++  +
Sbjct: 415 GMNQPIASNKTAAGRQQNRRVEFTL 439


>gi|108763506|ref|YP_633737.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108467386|gb|ABF92571.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 2699

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 82/281 (29%), Gaps = 17/281 (6%)

Query: 68   YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
               P     +        + +    +     D   DE    +  +   G  +        
Sbjct: 2417 SREPKQVAPVDTDGDGILDIDDACPTEPEDKDGFQDEDGCPDPDNDADGIPDTADTCPNE 2476

Query: 128  ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-KEKILAM 186
               +    ++                G  +    D   +  ++++ F       +     
Sbjct: 2477 PETVNGFEDTDGCPDVAPPPPPVDTDGDGIMDPDDRCPNDPEDKDGFQDEDGCPDPDNDR 2536

Query: 187  KRKKRLQDLAKKISSTLSGLVADNIVKG---VLFETTRTGILISIIDQRNTPMFDKSSSI 243
                  +D       T++G   ++       V        I+I          F     +
Sbjct: 2537 DGIPDAEDKCPNEPETINGFQDEDGCPDKGKVKVLVDGERIVI-----LEKVYFATGKDV 2591

Query: 244  PLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
             L  +  +L+++  VL  + +V  + I GHTD          N  LS  RA +    L+K
Sbjct: 2592 ILARSHPLLKQVAAVLRANPQVELVRIEGHTDDQ---GNDAKNLDLSQRRANNVRAFLVK 2648

Query: 302  SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             G++E R+  + G+   +    +        NRR+   +  
Sbjct: 2649 EGIAEGRMEAV-GYGETKPVDTNKTAKGRENNRRVGFTILR 2688


>gi|95929859|ref|ZP_01312600.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95134155|gb|EAT15813.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 246

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 7/149 (4%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           + +  +  ++ +    +   +     R  +++ I D     +F   SS   P    VL K
Sbjct: 82  VQRLYTRIMTQMNRLRMDPSIKVVKDRGAVILQINDS---ILFAPGSSTLKPAAFPVLAK 138

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKIS 313
           + E++        I GHTD  PF      NW LS+ R+ S  +   K+ +   +R+S + 
Sbjct: 139 VAELIRPLPLSARIEGHTDDIPFGRADMSNWDLSVARSVSVLKYFQKNDLLPLNRMSAV- 197

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVED 340
           G+   +  + +D     + NRR++ ++E 
Sbjct: 198 GYGAEKPLVPNDSPENRAKNRRVEFVLES 226



 Score = 36.9 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 20/71 (28%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                      W + Y+D +T+L+ FF+++  +   D                      
Sbjct: 3  KKPKKQSGGAPEWMVTYSDMVTLLLTFFVLLLSMANMDQIKFSQAAGSLKGAFGVFGGKD 62

Query: 81 KGIFDEQNPPE 91
          +      +  E
Sbjct: 63 RKEISPPSLVE 73


>gi|330910071|gb|EGH38581.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
          Length = 256

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|347155|gb|AAC36900.1| protein F [Pseudomonas fluorescens]
          Length = 317

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAV 274

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            QVL+K G++ +R+S + G+   R    +        NRR++
Sbjct: 275 KQVLVKDGIAPNRVSSV-GYGKSRPVADNATEAGRAINRRVE 315


>gi|228914307|ref|ZP_04077922.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228845301|gb|EEM90337.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 227

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +   +  + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSNTEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|332668363|ref|YP_004451151.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332337177|gb|AEE54278.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 312

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 17/302 (5%)

Query: 45  MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           +AFF V+ +  ++    K+ +          + T  +   +  N         ++  +  
Sbjct: 8   LAFFCVLCLTFSSCVMKKQYLA---------MQTDLQTQLEAANKDLGKLGVSLNEYMSR 58

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                    ++G   +  Q               Q    K+   +      DL K +   
Sbjct: 59  LAACERDKERLGGDIRTNQSAMQLREEQINDLKAQIADLKSQREKQLNTVTDLTKISSSA 118

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
               KE    L    K   L    + R   +   ++  L G++ + +    +       +
Sbjct: 119 NDNIKETLAQLERKDKYIHLLQAARTRADSINLALAVNLKGVLKEGLDDKDVDVKVDKTV 178

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-AR 282
               ++  +  +F   S+    +   VL KI ++L    +  + + G+TD  P +     
Sbjct: 179 --VFVNLSDKMLFQSGSATMTTKANEVLGKIAQILKSRPDLEVMVEGYTDNKPIKTACIE 236

Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           DNW LS+ RA +  + L K  GV  +R+    G   +     +D       NRR  I++ 
Sbjct: 237 DNWDLSVKRATAVARTLQKTHGVDPNRLIAA-GRGEYNALATNDTEEGRSTNRRTRIIIL 295

Query: 340 DR 341
            +
Sbjct: 296 PK 297


>gi|296534172|ref|ZP_06896663.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296265499|gb|EFH11633.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 157

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 1/141 (0%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++  S     ++ + +L E TR G+ I ++D    P+F    + P      +L ++  VL
Sbjct: 6   AAIQSDPGLSDLARQLLIEQTREGLRIQLVDADGQPVFATGQAAPNQRGRALLLRVATVL 65

Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A     + I GHTDA+PF     R NW LS +RA +A +VL+++G++E+R+  ++G A  
Sbjct: 66  ARLPYGLDIAGHTDAAPFRGGGDRSNWELSAERAGAARRVLIEAGIAEERLRAVAGRADR 125

Query: 319 RLKIASDPMNSANRRIDILVE 339
            L     P+++ANRR+ ILV 
Sbjct: 126 DLLSPDRPLDAANRRVSILVL 146


>gi|238895326|ref|YP_002920061.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae NTUH-K2044]
 gi|238547643|dbj|BAH63994.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 565

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + V+ +  +    I +    +  +FD   S   P +  +L  
Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSALKPGSTKLLVN 453

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD+       R N +LSL RA +    +  +G   +    + 
Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+   R   +++     + NRR++I +  ++
Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541


>gi|254693909|ref|ZP_05155737.1| Bacterial outer membrane protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214200|ref|ZP_05928481.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915807|gb|EEX82668.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 216

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 10/207 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +    +  T   +       +                  +   I A         +   +
Sbjct: 16  AGCTTDPYTGQQKVSNTTGGAAVGALGGLMVGGSSRAQRNAVLIGAGIGALGGGLIGNYM 75

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV        I++++        FD        +    L  +  VL
Sbjct: 76  DRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVAIVL 132

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+   
Sbjct: 133 RKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGYGAS 188

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +  +++      + NRR++I +   +G
Sbjct: 189 QPIVSNATPEGRAQNRRVEIQISPLRG 215


>gi|118477164|ref|YP_894315.1| flagellar motor protein MotS [Bacillus thuringiensis str. Al Hakam]
 gi|228945331|ref|ZP_04107686.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229183920|ref|ZP_04311136.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
 gi|301053265|ref|YP_003791476.1| flagellar motor protein [Bacillus anthracis CI]
 gi|118416389|gb|ABK84808.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
 gi|228599572|gb|EEK57176.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
 gi|228814303|gb|EEM60569.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|300375434|gb|ADK04338.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
          Length = 227

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|114571128|ref|YP_757808.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114341590|gb|ABI66870.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 329

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 105/337 (31%), Gaps = 30/337 (8%)

Query: 20  KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +    D  ++       + D   T+L+   +++++++         +   F         
Sbjct: 8   RFQEADNGDHWPG----FVDALATLLL---VIVFLLSIF-------VAGQFALSRALTGR 53

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN-- 136
             +         + + +  +  + +  +      L+                   L    
Sbjct: 54  DEQLAALNAQLAQLADELALTQAENTELELRVSGLETERDALSDALAMAGTQTAALQAEL 113

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             + E  + S          +    D   ++N   +       + +   +   +RL    
Sbjct: 114 DVERELSEESQRALMMLNLQIQALRDQIATLNAALDAAELRAQEAEAQVINLGERLNAAL 173

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254
            + ++ L+   +D   +       RTG+ I           +F   S+    E    L+ 
Sbjct: 174 AERAAELAVYRSDFFGRLRAILGNRTGVRIVGDRFVFETDVLFPSGSAALSNEGRESLRP 233

Query: 255 IGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           I + +        +    VI I GHTD  P R     NW LS  RA S    +   GV  
Sbjct: 234 IADAIIQLTDEIPSDLEWVIRIDGHTDPVPIRTTYPSNWHLSAARAISVVNWMEDLGVPS 293

Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +R+    GF  H   +        + NRRI++ +  R
Sbjct: 294 NRLVAA-GFGEHYPMVEGRSAEANARNRRIELKLTAR 329


>gi|94264078|ref|ZP_01287877.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93455494|gb|EAT05684.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 235

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 12/154 (7%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++ K I      L    +   V  E     IL+ I D      FD   +    +   +L 
Sbjct: 67  EVRKPIQQVFEDLQEAGL---VTVEDQEEEILVRIQDAVA---FDTGRAEIKGDFRELLD 120

Query: 254 KIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           ++GE++  S   + + GHTD  P         NW LS  RA +  + L+ +  +  DR++
Sbjct: 121 QLGEIIYDSQSTMVVEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLA 180

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            ++  A  +    +D       NRR++  +   +
Sbjct: 181 AVA-HADGKPVATNDTAEGRAANRRVEFRIRPGE 213



 Score = 39.2 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 4/48 (8%), Positives = 16/48 (33%)

Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +AD   +++ F +++   +  D+ +   +           +    
Sbjct: 1  MTTFADIALLVLCFLILILSFSTLDEPSFLKVTGSIRTAFGVQVETPA 48


>gi|319647377|ref|ZP_08001599.1| YtxE protein [Bacillus sp. BT1B_CT2]
 gi|317390724|gb|EFV71529.1| YtxE protein [Bacillus sp. BT1B_CT2]
          Length = 229

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 8/177 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S     +       K+     K +K  +     +      +  + +   +  +    G++
Sbjct: 54  SFQDRADGKSVAELKKDAGDQKAEKTAKSQDDLLKKINDYIEKNELSSLIAAKRDERGVI 113

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDN 284
           + + +     +FD   +    +   +L KI  +L   +  I + GHTD+ P        N
Sbjct: 114 LVLQEA---VLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPISTYRFPSN 170

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           W LS  RA +          +   R   I G+A  +    +   +    NRR++I++
Sbjct: 171 WELSAARASTVIGYFTSKEKLDSSRFLAI-GYADTKPVRDNRTESHMKENRRVEIVI 226



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 36/82 (43%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          + +    +      +W I ++D +T+++ FF++++ ++  D +  KA    F        
Sbjct: 4  RHERRKREQGRKSPNWIITFSDLITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKS 63

Query: 78 TASKGIFDEQNPPERSSQNKID 99
           A           E++++++ D
Sbjct: 64 VAELKKDAGDQKAEKTAKSQDD 85


>gi|311106780|ref|YP_003979633.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
 gi|310761469|gb|ADP16918.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
          Length = 183

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +   +A + ++    L A+           +  + +++    N  +F +      P+  
Sbjct: 26  DKEAQMAAEYAALNQKLTAELSGDRAQITQLQNELKVTM---VNEILFPEGGWRLSPKGE 82

Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKSGV 304
             L KI   L++      + +G+TD  P      +    N  LS  RA +  + L   GV
Sbjct: 83  QTLAKIAPTLSNLPGQQVVVQGYTDNEPIGPELRSQFPSNLELSSARADNVARFLTSKGV 142

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             + IS   GF   R   ++      + NRR++I++  
Sbjct: 143 PPNSISA-QGFGEARPVASNSTPQGKAQNRRVEIVITS 179


>gi|90420689|ref|ZP_01228595.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90334980|gb|EAS48741.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 220

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             + +  + L       GV        I++++        F    S  LP     L  + 
Sbjct: 77  AYMDNQEAKLRDQLRGTGVSVTRVGDRIILNMPSNIT---FPTDQSSILPAFYPTLNSVA 133

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL      ++++ GHTD+         N+ LS  RA S  Q+L   GV   R++   GF
Sbjct: 134 LVLKEYDKSIVNVYGHTDSQ---GSDGYNFTLSQQRASSVSQLLASQGVDPRRLNT-QGF 189

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++D     + NRR++I +
Sbjct: 190 GESQPVASNDTESGRAQNRRVEIAI 214


>gi|262275699|ref|ZP_06053508.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
 gi|262219507|gb|EEY70823.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
          Length = 331

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
             +  N  +F    +   P     L  + + L +  E   +I GHTD+         N +
Sbjct: 215 FSEADNVELFAFGKAELSPNASQQLGPMLKRLQNFDEATATIIGHTDSV---GSEAFNQK 271

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           LS  RA S     + +G+S +R+  I G        ++      + NRR++I
Sbjct: 272 LSEQRAQSVANYFISNGISAERL-TIIGKGETSPIASNKTKEGRAKNRRVEI 322


>gi|256819872|ref|YP_003141151.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581455|gb|ACU92590.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 360

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           ++  I     T +FD   S+  P+   +L  I  ++  + +   +  GHTD +       
Sbjct: 242 VVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT---GTPE 298

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI-LVE 339
            N +LS DRA +  Q L + GVS+ R+    G+   R   +++       NRR++I +V+
Sbjct: 299 HNLKLSQDRADAIKQYLSRHGVSKKRLDA-KGYGQTRPIESNETERGKEINRRVEINVVK 357

Query: 340 DRQ 342
           D Q
Sbjct: 358 DNQ 360


>gi|303325924|ref|ZP_07356367.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863840|gb|EFL86771.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
          Length = 235

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 4/200 (2%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
              TR         +      S +   N      + +      +   ++     I+  + 
Sbjct: 30  PPETRAGLAAYFSGERNFDSSSTSPVSNNPFIQNTDKIDTRDLKINEVEKSHYAIAQKIK 89

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            ++  + V       +   + + +    +  MF   S   LPE   VL  + ++L     
Sbjct: 90  QMLMADAVPQSSSGISADDVGVQLRVNSD-VMFKAGSVDFLPEGEKVLGSVLQILKEYNL 148

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323
            + +RGH D++  R      W LS  RA +    L   GV   R+  ++ +   R     
Sbjct: 149 YLVVRGHADSTEARPPYASAWELSGARAAAVLHYLADHGVKPTRLRGVA-YGDTRPLKPG 207

Query: 324 -SDPMNSANRRIDILVEDRQ 342
             +   + NRR++      +
Sbjct: 208 IDEESRAVNRRVEFFFHRPE 227



 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           +WK+ YADF+T +MAFFL++W++N    +T+  +  YF+       +++  + +      
Sbjct: 4   AWKVAYADFVTAMMAFFLLLWVLNMVPPETRAGLAAYFSGERNFDSSSTSPVSNNPFIQN 63

Query: 92  RSSQNKIDLSIDE 104
               +  DL I+E
Sbjct: 64  TDKIDTRDLKINE 76


>gi|227884752|ref|ZP_04002557.1| chemotaxis protein [Escherichia coli 83972]
 gi|227838353|gb|EEJ48819.1| chemotaxis protein [Escherichia coli 83972]
 gi|307552161|gb|ADN44936.1| putative motility protein [Escherichia coli ABU 83972]
          Length = 256

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|326203246|ref|ZP_08193111.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986504|gb|EGD47335.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 258

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP- 246
             ++++ L ++IS  +     + +   V       GI+++I ++    +F   S+I  P 
Sbjct: 89  EDQQMEALQEEISGLVDS---EGLKGNVSVTMQERGIVVTINEK---ILFKSGSAIIEPN 142

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGV 304
           +   V++   ++L+      I + GHTD  P ++     NW LS  RA +  ++L+  G 
Sbjct: 143 DQDTVIKIGKDILSKIPNKHIRVEGHTDNIPMKSALYPSNWELSAARAINVLKLLVDKGG 202

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              ++     +  +   + +      + NRR+DI++   
Sbjct: 203 INPKMIAPVPYGEYSPLVPNTTDINRAKNRRVDIVILRD 241



 Score = 45.3 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 33/114 (28%), Gaps = 8/114 (7%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF--------NPFGKNLMTAS 80
           N   W + YAD M +L+  F++++ ++  + +  + + Q           P      ++ 
Sbjct: 10  NAERWLLTYADLMNLLLILFIILYSMSQVNTEKFQQLSQSLSSAFGNGERPSVVQGGSSG 69

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
             + D                      +  +   + S   K            +
Sbjct: 70  NSLIDFPATMPSPVIPSKIEDQQMEALQEEISGLVDSEGLKGNVSVTMQERGIV 123


>gi|104780439|ref|YP_606937.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95109426|emb|CAK14127.1| putative outer memebrane protein, OmpA family [Pseudomonas
           entomophila L48]
          Length = 239

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           +  +D +   +F  +S          L  +   L   +   I + GHTD+         N
Sbjct: 127 VITLDDQGQVLFAFNSDRLEAGAQERLHNLLPKLNDPSVLSIKVIGHTDSV---GSDSYN 183

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             LS  RA S  + L+  G++ ++++   G         +D       NRR+++ +
Sbjct: 184 QGLSERRASSVAEYLISQGLAPEKVTS-QGRGESEPVADNDTEEGRAHNRRVELHL 238


>gi|218929795|ref|YP_002347670.1| putative OmpA family protein [Yersinia pestis CO92]
 gi|115348406|emb|CAL21342.1| putative OmpA family protein [Yersinia pestis CO92]
          Length = 261

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 151 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 210

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 211 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 259


>gi|186472491|ref|YP_001859833.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184194823|gb|ACC72787.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 166

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 9/151 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  LA       S     N   G+    T+ G+ + + ++    +F+ + S   P+    
Sbjct: 14  LSMLAACGGLDRSKEETLNKQAGIEVTQTKEGVQVRLPEK---VLFNFNESSLRPDAATA 70

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           L ++  VL  + + + I GHTD          N +LS  RA S    L + G+S  RI  
Sbjct: 71  LSRVVVVLNRTHKPMIIEGHTDNV---GTREYNQQLSEARAKSVADELERRGISASRI-T 126

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVED 340
           + G+A  R    ++     + NRR +I+V  
Sbjct: 127 LKGYAFDRPVADNNTPEGRARNRRTEIVVMG 157


>gi|332975535|gb|EGK12425.1| OmpA domain protein [Desmospora sp. 8437]
          Length = 243

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               +FD   S    +    L K+G+ L      + I G+TD       A  N +LS +R
Sbjct: 135 PGHILFDTDQSTIRAKARPELDKLGKSLKEYKGTVRIYGYTDDR---GSAAYNQKLSQER 191

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           A +    L+K  G++ D +  I GF      + +  D     NRR++I+V+ +
Sbjct: 192 AEAVKAYLVKECGIAGDHLK-IKGFGKKHPVVPNNSDSNRQKNRRVEIIVDSK 243


>gi|228926763|ref|ZP_04089831.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832876|gb|EEM78445.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 227

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   + +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDELYKKLKAYLDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|16080024|ref|NP_390850.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310916|ref|ZP_03592763.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315243|ref|ZP_03597048.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320160|ref|ZP_03601454.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221324441|ref|ZP_03605735.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|732300|sp|P39064|YTXE_BACSU RecName: Full=Uncharacterized protein YtxE
 gi|348049|gb|AAA68283.1| putative [Bacillus subtilis]
 gi|2293223|gb|AAC00301.1| YtxE [Bacillus subtilis]
 gi|2635456|emb|CAB14950.1| putative flagellar motor apparatus component [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291485404|dbj|BAI86479.1| flagellar motor protein MotS [Bacillus subtilis subsp. natto
           BEST195]
          Length = 242

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 76/197 (38%), Gaps = 11/197 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D +K K    S   E +  + +   +   +       K++ +   L KK+++ +     +
Sbjct: 49  DLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQDQLLKKVNTYIKD---N 105

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
           ++   +  +    G+++ + +     +FD   +  L     +L +I  +L      I + 
Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162

Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327
           GHTD+          NW LS  RA    Q       +   R   + G+A  +    +   
Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221

Query: 328 N--SANRRIDILVEDRQ 342
                NRR++I+++  +
Sbjct: 222 EHMKENRRVEIVIKKSK 238



 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++        +  SW + + D +T+++ FF++++ ++  D    KA        G  L  
Sbjct: 10  RRNGSGKNSQSSSSWMVTFTDLITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQP 69

Query: 79  ASKGIFDEQNPPERSSQNKIDLSI 102
               I  +   P  + + +     
Sbjct: 70  DQTSIEKKNTSPSDTKKQEDQQDQ 93


>gi|310814625|ref|YP_003962589.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
 gi|308753360|gb|ADO41289.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
          Length = 227

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +  A+   +     +   +   V        + +++       +F  +S+    ++   L
Sbjct: 82  RQEAELARARQEAELRQQLGGNVGIVNNGQNLTVTMPQD---VLFGTNSTAVSIQSQTDL 138

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + +   L       IS+ GHTD++     A  N  LS+ RA +   VL+  GV+  R+  
Sbjct: 139 RTVAASLNRYPNTSISVIGHTDST---GSASYNQDLSVRRAQAVASVLINGGVAPARVYT 195

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           + G    +   ++   +    NRR++I++    
Sbjct: 196 V-GRGASQPIASNATPDGRQLNRRVEIIITPTN 227


>gi|228471770|ref|ZP_04056543.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228276923|gb|EEK15618.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 455

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 72/270 (26%), Gaps = 27/270 (10%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P  K+      G+ +    P+       D        K   +               ++ 
Sbjct: 205 PDNKDACPEVPGLKEFNGCPDTDGDGIPDKDDACPQVKGPKEFNGCPDTDGDGIPDKDDA 264

Query: 131 IFYLSNSQQSEHCKNS-LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
              ++  ++   C ++      +K           ++              +K       
Sbjct: 265 CPEVAGPKEFNGCPDTDGDGIPDKDDKCPDVAGPAENGGCPWPDTDGDGVLDKDDLCPEV 324

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                                                 +     T +FD   +    ++ 
Sbjct: 325 AGPASNKGCPEPDEKEQK-------------------QLNQYAKTILFDTGKATIKFQSA 365

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL +I  VL         I GHTD++        N  LS +RA +    L++ G+   R
Sbjct: 366 EVLNQIINVLKKYPNSRFRIEGHTDST---GKKAKNMILSQNRADAVKVYLIQGGIDAGR 422

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           +    GF   +   ++        NRR++I
Sbjct: 423 LES-QGFGPEKPIASNKNKKGRELNRRVEI 451


>gi|239827803|ref|YP_002950427.1| flagellar motor protein MotB [Geobacillus sp. WCH70]
 gi|239808096|gb|ACS25161.1| OmpA/MotB domain protein [Geobacillus sp. WCH70]
          Length = 251

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 7/184 (3%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D E  I  E          ++      K+  ++L        + +   ++   +    T 
Sbjct: 65  DFESPIEPETPPSPSKQEHKQQQKNSNKEDKEELHAVQEKIDTYIAEKHLNGKLQTSLTD 124

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI 280
            G+ I+I++     +FD  S+   P+   + ++I ++L  +    I I GHTD  P  N 
Sbjct: 125 EGLAITILND---ILFDSGSAEVRPKDRKLAKEISQLLVMNPPRNIIISGHTDNVPIHNA 181

Query: 281 -ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               NW LS+ RA +  ++L+++   + R     G+   +    ++       NRR++IL
Sbjct: 182 QFASNWELSVMRAINFMKILLENPELDPRWFSAKGYGEFKPVAPNNTPEGRMKNRRVEIL 241

Query: 338 VEDR 341
           +  +
Sbjct: 242 ILPK 245



 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 4/101 (3%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
           +   SW I Y+D +T+L+A F+V++  +  D    + I + FN           G+ D +
Sbjct: 12  HINESWLIPYSDLLTLLLALFIVLFASSQIDQKKFQQIARSFNTALA----GGTGVLDFE 67

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           +P E  +         +   KNS        +  ++     
Sbjct: 68  SPIEPETPPSPSKQEHKQQQKNSNKEDKEELHAVQEKIDTY 108


>gi|220918973|ref|YP_002494277.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956827|gb|ACL67211.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 544

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 88/295 (29%), Gaps = 19/295 (6%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS----SQNKIDLSIDEHITKNSV 111
           + + +    +   F       +     +     P  R     +      +          
Sbjct: 260 SQNAELLAGVRYGFGEGEIYALGGPGFMESPGTPTYRGLIGFAFTGGKKAAPPPPPPPPD 319

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
               G ++  +Q   L+++   ++N Q     +  +  +            +   +++  
Sbjct: 320 PCAAGQSHTPEQCPTLDDDGDGVANGQDRCPLEKGVAENQGCPDKDTDGDGVPDRLDRCP 379

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +      ++       +     D  +               +    +  +        D 
Sbjct: 380 SVPGATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKI-------DI 432

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +    FD        ++  +L  + +++       V++I GHTD++     A  N  LS 
Sbjct: 433 KEKVYFDTGKDTIKAKSNALLDDVAKLVAANPQVGVVTIEGHTDST---GSAATNRALSQ 489

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            RA +    L+  GV   R+    GF   +   ++        NRR++  +++  
Sbjct: 490 KRAEAVKDYLVSKGVDASRLEA-KGFGPDQPVESNKTAKGREANRRVEFTIQNAN 543


>gi|325523338|gb|EGD01688.1| Outer membrane protein [Burkholderia sp. TJI49]
          Length = 552

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   +   P++   +    E++    +    + G+TD          N +LS+ 
Sbjct: 440 DSMSLFDSGKAQLKPDSTRAMVGALEMIKTHPDKRILVAGYTDNV---GHPDSNLKLSVA 496

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +    L+++ G+   +   I G+   R    +D     + NRR++I +   
Sbjct: 497 RAQAVRDWLIEASGIPATQF-AIQGYGDTRPIADNDTPEGRARNRRVEITLVPD 549


>gi|225627675|ref|ZP_03785712.1| OmpA family protein [Brucella ceti str. Cudo]
 gi|225617680|gb|EEH14725.1| OmpA family protein [Brucella ceti str. Cudo]
          Length = 243

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 212

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 213 GASQPIASNATPEGRAQNRRVEIQISPLRG 242


>gi|169633170|ref|YP_001706906.1| hypothetical protein ABSDF1479 [Acinetobacter baumannii SDF]
 gi|169151962|emb|CAP00823.1| conserved hypothetical protein; putative bacterial outer membrane
           domain [Acinetobacter baumannii]
          Length = 471

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+ +  L +     I+           
Sbjct: 319 HTEVVATAPETAEQSVSNSLSASQTALTAIDPNNVDENALVKALNLQIIN---------- 368

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469


>gi|83589634|ref|YP_429643.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
 gi|83572548|gb|ABC19100.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
          Length = 256

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 8/176 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +  E      P + +   A     R Q++ +   +  + L A+ +   V       GI +
Sbjct: 67  VETEPAPSNYPENLQTPEAAAALARAQEMMQTYQTVKNFLTANGLESEVEVRYEDRGIAL 126

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
              D +   +FD   +   PE   +L K+  +L+     + + G+TD  P        NW
Sbjct: 127 ---DIKERILFDSGRADLKPEARQLLDKLSGLLSRLPNEVKVEGYTDNRPIHTVQFPTNW 183

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            LS  RA    +  + +  +  DR   I G+  +     +D     + NRR+ +L+
Sbjct: 184 ELSTARAARVVRYFIEEHHLQPDRFMAI-GYGEYHPLYPNDSPEHMAENRRVVLLL 238



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
          +KK     +      +W I Y+D MT L+ FF++++  +  +    +     +   G   
Sbjct: 3  VKKWQKKSEE--GAPTWMITYSDLMTQLVVFFVLLFSFSVINQQKFQQFIASYQGMGILD 60

Query: 77 MTASKGIFDEQNPPERSS 94
             S  +  E  P     
Sbjct: 61 GGVSPIVETEPAPSNYPE 78


>gi|78358626|ref|YP_390075.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221031|gb|ABB40380.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 242

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L +     M++ +RL+DL          +    + + +       G+ I + D     +
Sbjct: 75  ELLESPRDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQGLAIVLTD---GVL 131

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S         +L  + +VL +S+  ++I GHTD SP      DN+ LS  RA +  
Sbjct: 132 FRPGSWELTAPARKLLAPLADVLEYSSADVTISGHTDDSPASG--VDNYDLSGRRAMAVL 189

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              ++SG+  +R   +SG+   +   ++      + NRR++IL++  Q
Sbjct: 190 DFFLESGLGAERF-SVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQ 236


>gi|289664228|ref|ZP_06485809.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668820|ref|ZP_06489895.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 365

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPRED 178

Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +       +P                      L D    +++           + +
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     + I +        FD + S   P+ I +L +  E+L    +  + + GHTD+
Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326
              +     N +LS  RA + Y  L K+GV   R+    G+   R    +          
Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351

Query: 327 MNSANRRIDILVED 340
             + NRR ++ V++
Sbjct: 352 GRAKNRRTELNVQN 365


>gi|217959212|ref|YP_002337760.1| flagellar motor protein MotS [Bacillus cereus AH187]
 gi|217063689|gb|ACJ77939.1| putative chemotaxis protein MotB [Bacillus cereus AH187]
          Length = 225

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +     +   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKTVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ K+          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|328958273|ref|YP_004375659.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
 gi|328674597|gb|AEB30643.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
          Length = 205

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 10/207 (4%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISS 201
              SL +  E    +  + +   SI +E          E I A   +  L  +L K  + 
Sbjct: 2   SSVSLEKFQEASNSIQSAFNGGDSIIEESIKDTETEPSEDITAAPSEDSLDPELIKMYNE 61

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            ++ L A+ +      E  + GI ++I +     +F   S+I        L  + +++  
Sbjct: 62  VVAFLEANEMTAQASVEYDQDGIYVNIQES---ILFGSGSAIIAESGESTLNGLSDLIQQ 118

Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319
               + + G+TD  P  N     NW LS  RA S  + L  +  V   R+S   G+  + 
Sbjct: 119 FENDVVVEGYTDDVPMNNSIFSSNWELSTGRALSVLRYLSEERSVDPTRLSA-KGYGEYH 177

Query: 320 LKIASDPMN--SANRRIDILVE-DRQG 343
               +D       NRR++I++  DRQG
Sbjct: 178 PISPNDSEENKEKNRRVNIVLVYDRQG 204


>gi|73539085|ref|YP_299452.1| OmpA/MotB [Ralstonia eutropha JMP134]
 gi|72122422|gb|AAZ64608.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 575

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 22/187 (11%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-------- 226
               +         K+   +L +  S+ +   +     +G         ++         
Sbjct: 377 AEHDAARVDALQALKRDRDELEQYQSAGVPPRLGLGFYRGAKLLAPLNTLIAGYQPPAPP 436

Query: 227 -SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
            S I+  +  +F   S++  P +  VL    E++    +    + GHTDA      A+ N
Sbjct: 437 PSTIELNSLSLFKSGSAVLNPGSNRVLIGALELIKAHPDKRVLVAGHTDAV---GAAQSN 493

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV--- 338
            +LS  RA S    L  + G+   R   I G+   R K  +D       NRR++I +   
Sbjct: 494 LKLSEARAASVRDWLADAAGLPVTRF-AIQGYGDTRPKAPNDTEAGRSANRRVEITLVPD 552

Query: 339 --EDRQG 343
             +DR+G
Sbjct: 553 CHDDRRG 559


>gi|83746716|ref|ZP_00943765.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
 gi|207721381|ref|YP_002251822.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
 gi|207742640|ref|YP_002259032.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
 gi|83726669|gb|EAP73798.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
 gi|206586540|emb|CAQ17127.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
 gi|206594034|emb|CAQ60961.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
          Length = 209

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + E L    E   S+ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAMIKPSFRGPLDSVAETLTQHPELAASVVGHTDST---GNPNYNMSLSQR 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+ +R++   G    +    +      + NRR++I ++  QG
Sbjct: 156 RAQSVTSYLTDRGVARNRLTA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209


>gi|149370978|ref|ZP_01890573.1| outer membrane protein, OmpA family [unidentified eubacterium
           SCB49]
 gi|149355764|gb|EDM44322.1| outer membrane protein, OmpA family [unidentified eubacterium
           SCB49]
          Length = 323

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 107/292 (36%), Gaps = 16/292 (5%)

Query: 59  DDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            D  +A+        +        +S G+   +   ++   +K  L++D    +   D  
Sbjct: 29  QDKYEALKVENASLMSQLDNVEGASSIGLEQIKEDLQKCKSDKTQLAMDLAGAQAKYDKI 88

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
            G  +  +       +     N       +      + K  DL +   + K      +  
Sbjct: 89  KGDYDALEANSSENLSENLDRNRALLTELEAKERILNTKEADLIEQEKVLKRAQNNLDAS 148

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              + + + +   ++ ++  L   IS+ L+    + +      E     + +S+    N 
Sbjct: 149 AARVLELEGIIAAKEAQMDALKNAISAALTSFEGNGL----TVEQREGKVYVSM---ENK 201

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF--RNIARDNWRLSLDR 291
            +F+  S          +  +G+VL  + E+   I GHTD  P+  + + +DNW LS  R
Sbjct: 202 LLFESGSWDVNSRGREAVVALGKVLGDNKEIAVLIEGHTDNVPYGEKGLIKDNWDLSTKR 261

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           A +   +L ++          +G   +    +++     + NRRI++++  +
Sbjct: 262 ATAIVAILTENNNIPKENLTAAGRGEYAPIASNNTSEGKAKNRRIEVVLTPK 313


>gi|229138428|ref|ZP_04267017.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
 gi|228644965|gb|EEL01208.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
          Length = 213

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 13/219 (5%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L  +        S     +  K L K +D E+   K     +P +S EK    
Sbjct: 3   TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEK 62

Query: 187 K-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              KKR+ DL KK+ +     V +N +  V      TG+ + I+D     +FD   +   
Sbjct: 63  TVSKKRMDDLYKKLKAY----VDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVK 115

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SG 303
           PE   ++ K+          I + GHTD+ P  N     NW LS  RA +    L++   
Sbjct: 116 PEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYN 175

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 176 VDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213


>gi|167467398|ref|ZP_02332102.1| possible OmpA/MotB family protein [Yersinia pestis FV-1]
          Length = 263

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 153 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 212

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 213 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 261


>gi|78046598|ref|YP_362773.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325925345|ref|ZP_08186747.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
 gi|78035028|emb|CAJ22673.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325544223|gb|EGD15604.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
          Length = 365

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           D
Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPRED 178

Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +       +P                      L D    +++           + +
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     + I +        FD + S   P+ + +L +  E+L    +  + + GHTD+
Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS 294

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326
              +     N +LS  RA + Y  L K+GV   R+    G+   R    +          
Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351

Query: 327 MNSANRRIDILVED 340
             + NRR ++ V++
Sbjct: 352 GRAKNRRTELNVQN 365


>gi|291613031|ref|YP_003523188.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291583143|gb|ADE10801.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 259

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           ++   +  K+ + +Q+LAK ++++++  V +     +    T  G+ + I       +F 
Sbjct: 86  ARLAEIQRKQNESMQNLAKDLNASMASFVKNG---QMNVSQTGRGVELEINAS---ALFK 139

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
           +  +   PE +  L    +VLA +   I + GHTD  P        NW LS  RA S  +
Sbjct: 140 QGEADIEPEALKTLADAAKVLAGNDFAIEVEGHTDNLPISTPKFPSNWELSSARASSVVR 199

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + +  G++  R+  + G A ++   ++D     + NRR+ I V + 
Sbjct: 200 LFIDQGITAKRLKAV-GSADNQPVDSNDTPEGRARNRRVTITVLNP 244



 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          + ++    +   +    W + YADF+T+L AFF+VM+ I++ ++   K      N     
Sbjct: 1  MARRPKRAEHDNH--ERWMVSYADFITLLFAFFVVMYGISSVNEGKYKVFSVSVNQAFGA 58

Query: 76 LMTASKG 82
             A +G
Sbjct: 59 NGKAGEG 65


>gi|300823443|ref|ZP_07103573.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|300524061|gb|EFK45130.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|320201151|gb|EFW75734.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
          Length = 256

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +   + +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220


>gi|146276251|ref|YP_001166410.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554492|gb|ABP69105.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 228

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 10/147 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L        V    T + +++++       +F   S+   P+    L  + + 
Sbjct: 89  LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLAAVAQN 145

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       I + GHTD++     A  N  LS+ RA S   VL+ +GV   R++ + G   
Sbjct: 146 LLRYPNSTIMVVGHTDST---GSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVASL-GRGE 201

Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342
            +   ++      + NRR+DI++    
Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIRPTN 228


>gi|224373377|ref|YP_002607749.1| major outer membrane protein [Nautilia profundicola AmH]
 gi|223589055|gb|ACM92791.1| major outer membrane protein [Nautilia profundicola AmH]
          Length = 209

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + ++        LQK+ E+L ++    I + GHTD          N +LS  RA + 
Sbjct: 103 FDFNKAVVKKIYYPELQKVAEILKNNPNLKIEVAGHTDNI---GSDEYNLKLSQKRAEAV 159

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL-VEDRQ 342
             +L+   G+   RI    G+      + +  +   + NRR++I+ + ++Q
Sbjct: 160 KNILVNKFGIDPSRIVA-KGYGEKYPLVPNTTETNRALNRRVEIVNITNKQ 209


>gi|218552836|ref|YP_002385749.1| hypothetical protein ECIAI1_0271 [Escherichia coli IAI1]
 gi|218693715|ref|YP_002401382.1| hypothetical protein EC55989_0255 [Escherichia coli 55989]
 gi|218350447|emb|CAU96134.1| flagellar system protein [Escherichia coli 55989]
 gi|218359604|emb|CAQ97145.1| flagellar system protein [Escherichia coli IAI1]
          Length = 296

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +   + +KK   +L 
Sbjct: 56  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 115

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 175

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260


>gi|294012887|ref|YP_003546347.1| OmpA-family protein [Sphingobium japonicum UT26S]
 gi|292676217|dbj|BAI97735.1| OmpA-family protein [Sphingobium japonicum UT26S]
          Length = 226

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 67/211 (31%), Gaps = 10/211 (4%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +  +  +       N+  R   K         L   +  +        +++ + A     
Sbjct: 13  LAAMLATTACTTDPNTGNRTISKAAIGGIGGALGGYLLGDLVGGRHDRTEKILGAGIGAV 72

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
               +   + +    L  +    GV        +++ +    +   F   SS   P+   
Sbjct: 73  AGAGIGAYMDAQERKLREETAGSGVDVIRDGDNLVLRM---PSGITFATDSSAVQPQFQP 129

Query: 251 VLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L  +  VLA      I + GHTD+         N  LS  RA +    L   GV   RI
Sbjct: 130 TLNDVASVLAQYPKTYIDVYGHTDSD---GTDTYNQALSERRAQAVGDYLTTHGVQSARI 186

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               GF   +   ++        NRR++I +
Sbjct: 187 -ATRGFGETQPIASNATAEGKASNRRVEIKI 216


>gi|94270700|ref|ZP_01291804.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93450704|gb|EAT01786.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 227

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 12/154 (7%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++ K I      L    +   V  E     IL+ I D      FD   +    +   +L 
Sbjct: 59  EVRKPIQQVFEDLQEAGL---VTVEDQEEEILVRIQDAVA---FDTGRAEIKGDFRELLD 112

Query: 254 KIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           ++GE++  S   + + GHTD  P         NW LS  RA +  + L+ +  +  DR++
Sbjct: 113 QLGEIIYDSQSTMVVEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLA 172

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            ++  A  +    +D       NRR++  +   +
Sbjct: 173 AVA-HADGKPVATNDTAEGRAANRRVEFRIRPGE 205


>gi|169796598|ref|YP_001714391.1| hypothetical protein ABAYE2575 [Acinetobacter baumannii AYE]
 gi|215484059|ref|YP_002326284.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
 gi|301344741|ref|ZP_07225482.1| OmpA family protein [Acinetobacter baumannii AB056]
 gi|301510762|ref|ZP_07235999.1| OmpA family protein [Acinetobacter baumannii AB058]
 gi|301595171|ref|ZP_07240179.1| OmpA family protein [Acinetobacter baumannii AB059]
 gi|332853538|ref|ZP_08434802.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332868403|ref|ZP_08438134.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|169149525|emb|CAM87414.1| conserved hypothetical protein; putative bacterial outer membrane
           domain [Acinetobacter baumannii AYE]
 gi|213987872|gb|ACJ58171.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
 gi|332728571|gb|EGJ59943.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332733402|gb|EGJ64585.1| OmpA family protein [Acinetobacter baumannii 6013113]
          Length = 471

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   T V   + GHTD++     A  N  LS  RA + 
Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVTGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469


>gi|261380420|ref|ZP_05984993.1| OmpA family protein [Neisseria subflava NJ9703]
 gi|284796655|gb|EFC52002.1| OmpA family protein [Neisseria subflava NJ9703]
          Length = 411

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 15/182 (8%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           ++ S+  + N     ++  K+ ++  K++      ++   L   +A  +   V  E  + 
Sbjct: 217 MQWSLGDKFNTASTKVNSLKLPSVITKQQDTQKTVRLRPLLENEIARKL---VSVEDFQD 273

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281
              ++I+      +F+  S+    +   VL  + + L      I + G+TD  P ++   
Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLAAVSQALDSVEGQIIVTGYTDNQPIQSLNF 330

Query: 282 RDNWRLSLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
             NW LS  RA +  ++L   +K+G    RI    G         +D     + NRR++I
Sbjct: 331 PSNWHLSQARADAVKEILLNYVKNG--GTRIRS-EGRGSTDPVAPNDTLENRAKNRRVEI 387

Query: 337 LV 338
            +
Sbjct: 388 TL 389


>gi|149925845|ref|ZP_01914109.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
 gi|149825962|gb|EDM85170.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
          Length = 222

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           ++D     +FD + S    +    L +I   L  +   I  + G+TD++      + N  
Sbjct: 111 MLDIPGAALFDTNKSDVKAQFAGTLDQIAATLRDNPNTIVCVIGYTDST---GSDQYNQD 167

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS+ RA S    L   G+S  R++   G        ++D     + NRR+++ V +
Sbjct: 168 LSVRRAQSVTNFLTAKGISGARLTAA-GLGEGFPVASNDTESGRAQNRRVEMYVRN 222


>gi|126668169|ref|ZP_01739130.1| Flagellar motor protein [Marinobacter sp. ELB17]
 gi|126627318|gb|EAZ97954.1| Flagellar motor protein [Marinobacter sp. ELB17]
          Length = 279

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 9/196 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-TLSGLVAD 209
            + G    K +D   S++ ++     P   ++         + +    ++S  +  L  +
Sbjct: 71  DDGGSLPIKISDGNSSLDPDKQLQAEPELIDERSTSDGVTPVSEGVITLASSLIRELENE 130

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                +  +     ++I   +      F    +    E + +++++ +VL +    + + 
Sbjct: 131 VASGALNVDYDEHQVIIRFSEDAT---FMSGDATIKKEMLPIIERVVDVLKNCRGDVVVA 187

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP- 326
           G+TD  P  +     NW LS  RA S    L+    V  DR+    G A     + ++  
Sbjct: 188 GYTDDRPIASSRYRSNWDLSAARAVSVVHELVLNRDVPADRVIAA-GRAETNPLVPNNSP 246

Query: 327 -MNSANRRIDILVEDR 341
              + NRR++I +   
Sbjct: 247 ENRAVNRRVEIAIRGP 262


>gi|85858041|ref|YP_460243.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
 gi|85721132|gb|ABC76075.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
          Length = 223

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
           +    FD +S+   P     + ++  V+    E  I + GHTD+         N  LS  
Sbjct: 109 KGDVTFDTNSAEVRPGLYSEINRVAGVMTQYPETLIRVEGHTDSV---GSDAYNMDLSTR 165

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +   +L++ GV++ RI ++ G+        +D       NRR++I +
Sbjct: 166 RANAVKTLLVQRGVADSRI-EVVGYGETMPIATNDTEAGRQKNRRVEIKI 214


>gi|119385600|ref|YP_916655.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119376195|gb|ABL70959.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 215

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +      L        +      T + + + +     +F   S+    +    L  I   
Sbjct: 76  LDQQQRSLQQSLNNPNIQIVNHGTHLSVVMPEST---LFATDSAAVGAQGQNDLYTIARN 132

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       I I GHTD++     A  N  LS  RA S   +L   GV++ R++ + G   
Sbjct: 133 LTQYPNSRIQIVGHTDST---GSAAYNQDLSERRARSVAGILTAGGVAQSRVTTL-GRGA 188

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            +   ++D     + NRR++IL+   +
Sbjct: 189 TQPVASNDTAAGRAQNRRVEILITPTR 215


>gi|148549426|ref|YP_001269528.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148513484|gb|ABQ80344.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 263

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        +    + +    +   +   +     A
Sbjct: 39  QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EAELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    + G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 SSAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250


>gi|325295240|ref|YP_004281754.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065688|gb|ADY73695.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 251

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RG 270
            K V        + + + D     +F  +S    PE    L+++   L+ + + + +  G
Sbjct: 117 NKPVAVVKEPNRVRVVLKDS---VLFGFNSYQLKPEAKETLRRLARTLSQNPDTVIVISG 173

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
            TD++        N RLS  RA S    L+ +GV   RI  + G    +    ++     
Sbjct: 174 FTDST---GSFDYNVRLSEKRAESVKNELVLNGVDPTRIL-VFGCGPKKPIAPNNTPEGR 229

Query: 329 SANRRIDILVEDR 341
           + NRR++ILV  +
Sbjct: 230 ALNRRVEILVYPK 242


>gi|253681414|ref|ZP_04862211.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
 gi|253561126|gb|EES90578.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
          Length = 242

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 8/151 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
               S     +  + +   V  +    GI+I + D     +FD + +     +  +L KI
Sbjct: 92  EAMYSKVKEFMDKNKLNNTVQVKRDAKGIIIELKDN---ILFDSAQAEIKTPSKEILDKI 148

Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313
             +L      I I GHTD  P  N     NW LS  RA +  +  ++  G++ D+     
Sbjct: 149 SNLLESVPNGIIIEGHTDNVPIHNAKYASNWELSTQRAVNVLKYFVENKGLAPDKFQAA- 207

Query: 314 GFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           G+        +D     + NRR++IL+   +
Sbjct: 208 GYGEFHPIEKNDNYANKAKNRRVNILITSGE 238



 Score = 39.9 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++     +      W   YAD +T+L+ FF++++  ++ D      I            +
Sbjct: 3   RRKKAQQSEGGGEEWLQTYADTITLLLTFFVLLYASSSLDTVKFNKISSSLQSVLSGSNS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
            S   F+           +          +
Sbjct: 63  NSILDFNPNGEVPIVGPPQEMGPKSGGGNE 92


>gi|239503512|ref|ZP_04662822.1| OmpA family protein [Acinetobacter baumannii AB900]
          Length = 471

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469


>gi|193076900|gb|ABO11623.2| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
          Length = 471

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469


>gi|114706609|ref|ZP_01439510.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
 gi|114538001|gb|EAU41124.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
          Length = 344

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 100/345 (28%), Gaps = 26/345 (7%)

Query: 18  KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70
           + + +   +          + D   T+L+A       F++   I + +   +       N
Sbjct: 5   RNRRSAGGSAEYWPG----FVDALSTLLLAIMFLLSVFVLAQFILSREISGQDEALDRLN 60

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                L              E    +           ++ +   + S +          +
Sbjct: 61  GQIAELTQLLALERSNAQDSEDEIASLRASLGQLEDERSRLQSALDSGSGSAAAANATIS 120

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
               +  ++    + + ++     + L        ++            + +       +
Sbjct: 121 ALQDNLEEEESISQRARSQVELLNQQLSALRQQIGALESALEASEERDQESQTKIADLGR 180

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248
           RL     +    L+   +D   +       R  I I       ++  +F   S+      
Sbjct: 181 RLNVALAQRVQELNRYRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPSGSADLQTAG 240

Query: 249 IVVLQKIGEVLAH--------STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQV 298
              L ++   +             ++ + GHTD  P        DNW LS+ RA S  + 
Sbjct: 241 TDELDQMASAIRDLAREIPSDINWIVRVDGHTDNVPLSGTGQFDDNWELSVARASSVVKY 300

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           L+  GV  + +   +GF   +             NRRI+  + +R
Sbjct: 301 LISQGVQAEHL-AATGFGEFQPIEEGSTPEVRRRNRRIEFKLTER 344


>gi|320183885|gb|EFW58714.1| Flagellar motor rotation protein MotB [Shigella flexneri CDC
           796-83]
          Length = 256

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GH DA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHIDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  + +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220


>gi|260574860|ref|ZP_05842862.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259022865|gb|EEW26159.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 218

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             +  +   +    +   T   +++++       +F   S+   P+    L+ +   L  
Sbjct: 81  QQAADLRSQMSNSTMVTNTGNSLVVTMPQD---ILFALDSANLRPDLQADLRAVSNNLLD 137

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  I + GHTD       A  N  LS  RA +   VL   GV   RIS   G    + 
Sbjct: 138 YPDSTIEVVGHTDD---SGSAAYNQDLSERRARAVAAVLRNGGVPGGRISAY-GRGEDQP 193

Query: 321 KIASDP--MNSANRRIDILVEDRQ 342
             ++      + NRR++I++    
Sbjct: 194 IASNQTVNGRAQNRRVEIIIHPSN 217


>gi|332162880|ref|YP_004299457.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604276|emb|CBY25774.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667110|gb|ADZ43754.1| Flagellar motor protein MotB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863328|emb|CBX73451.1| putative protein mbhA [Yersinia enterocolitica W22703]
          Length = 272

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 4/230 (1%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           + + S  ++++     N     +          S +   +    +      +++ +    
Sbjct: 20  VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKFSDSVDGHEQAKETKSNLAV 79

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    + L  +  + +++L + I+   S     +    +  E    G+ I I D +
Sbjct: 80  EVPEPEQSLEELVDRSGREMEELTRIITQITSAY---DAQSNLKMEVVPQGLRILIQDDK 136

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291
           +  MF +SS++  P    +L ++          I I GHTDAS +R+    +NW LS +R
Sbjct: 137 HRDMFQRSSAVLTPFFSRLLAELAPAFNEMDNKIIITGHTDASRYRDQVLYNNWNLSGER 196

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A  A++ L+K G+ +DR+ +I+  A   L  +++P+ + NRRI+I+V  +
Sbjct: 197 ALMAHKALVKGGLDDDRVLQINAMAEQMLLDSAEPLAAKNRRIEIMVLTK 246


>gi|194364578|ref|YP_002027188.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194347382|gb|ACF50505.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 362

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L D    +++           + +  +     + I +        FD   S   P+ +
Sbjct: 210 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVN----FDFDKSNLRPDAV 265

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +  E+L    +  + + GHTD+   +     N +LS  RA + Y  L K+GV   R
Sbjct: 266 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 322

Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
           +    G+   R    +            + NRR ++ V++
Sbjct: 323 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 362


>gi|146308382|ref|YP_001188847.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145576583|gb|ABP86115.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 261

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     L+  +  E  +     D    +   +    + +    +   +   +     A
Sbjct: 39  QSDPQSNKLAALETKEAQEWLNKADKAYMERDDEKKVDQLAYLTNQRVEVAKQTIALRAA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       K            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  ENELKNTSAQRAKALLDARDAQIRKLQDSLNAKQTERGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  + ++   L  + E    + G+TD+      A  N  LS  RA S  + L+++GV
Sbjct: 155 SSALPNVTQLARFLQENPERQVIVEGYTDSV---GSASYNQGLSERRAESVRRALIRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  D   + NRR+++ + +  
Sbjct: 212 EPTRIVA-QGYGKEYPVADNSSDSGRAQNRRVEVTISNDN 250


>gi|330876044|gb|EGH10193.1| flagellar motor protein MotD [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 295

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   G++  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  + +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|262038680|ref|ZP_06012041.1| outer membrane protein [Leptotrichia goodfellowii F0264]
 gi|261747295|gb|EEY34773.1| outer membrane protein [Leptotrichia goodfellowii F0264]
          Length = 147

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
             +     +    ++++    + +FD   S   P+   +LQ + E +  +   ++I GHT
Sbjct: 19  DEIDITKVKGPKEVTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHT 78

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D+   +     N +L + RA S    +++ GV   RI  +           +D       
Sbjct: 79  DS---KGTNEYNMKLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATNDTAEGRAL 135

Query: 331 NRRIDILVEDRQ 342
           NRRI+  +  + 
Sbjct: 136 NRRIEFKLVRKN 147


>gi|253582159|ref|ZP_04859382.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
 gi|251835698|gb|EES64236.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
          Length = 186

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                KE ++     + + +       TL  ++  N    V        +++S+      
Sbjct: 23  DKQPLKELVIEETENEFIMEDIDVSKKTLEEIIVFNEKG-VTIRREGNNLVLSM---PEL 78

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD +      +    L  + + L  + ++   I G+TD   F      N  LS+ RA 
Sbjct: 79  VLFDFNKYEVKNKVKGSLNALAKALEENPDIRIKIDGYTD---FIGSEGYNLELSVKRAN 135

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
           +    L   GV    I  I G+       ++  +   + NRR++ ++   +
Sbjct: 136 AIKDYLTNRGVKPSNI-SIEGYGKQNPIASNQTETGRAKNRRVEFIISRDK 185


>gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O]
 gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O]
          Length = 357

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 7/146 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A+++           + +    E     +      Q N  +F   SS         L  +
Sbjct: 203 AEEVKQEEPVAEPILLAEEPKPEPKPEWVTKFSNQQYNQELFATGSSKLSAGGKQALTPL 262

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            EVL    +    I GHTD++      + N R+S  RA +    L++ GV  +++  +SG
Sbjct: 263 AEVLIKYPDAEAEIVGHTDST---GSEKVNQRISEQRAQAVADYLVEQGVKAEQLK-VSG 318

Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338
               +   ++      + NRR+++ +
Sbjct: 319 AGESQPIASNKTAEGRAQNRRVEVTI 344


>gi|146306455|ref|YP_001186920.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145574656|gb|ABP84188.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 244

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           + ++      +F   S+    E   +L  +   L   S   + + GHTD+         N
Sbjct: 131 VIVLSDLGNVLFAFDSAELTAEARRLLTDVSARLTGASLVSVKVVGHTDSV---GSDAYN 187

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
             LS  RA S    L+  GV   ++S   G    +    +  D   + NRR+++ V  
Sbjct: 188 QGLSERRARSVADFLVAQGVPAGKLST-EGRGESQPVADNGSDAGRAQNRRVELYVSR 244


>gi|307293986|ref|ZP_07573830.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
 gi|306880137|gb|EFN11354.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
          Length = 226

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 63/199 (31%), Gaps = 10/199 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
             N+  R   K         L   +  +        +++ + A         +   + + 
Sbjct: 25  DPNTGNRTISKAAIGGIGGALGGYLLGDLVGGRHDRTEKILGAGIGAVAGAGIGAYMDAQ 84

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              L       GV        +++ +    +   F   SS   P+    L  +  VLA  
Sbjct: 85  EKKLREQTAGSGVDVIRDGDNLVLRM---PSGITFATDSSAVQPQFQPTLNDVASVLAQY 141

Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I + GHTD+         N  LS  RA +    L   GV   RI    GF   +  
Sbjct: 142 PKTYIDVYGHTDSD---GTDVYNQGLSERRAQAVGDYLTSHGVQSARI-ATRGFGETQPI 197

Query: 322 IASDPMNSA--NRRIDILV 338
            ++        NRR++I +
Sbjct: 198 ASNATAEGKASNRRVEIKI 216


>gi|184157492|ref|YP_001845831.1| outer membrane protein [Acinetobacter baumannii ACICU]
 gi|332872459|ref|ZP_08440430.1| OmpA family protein [Acinetobacter baumannii 6014059]
 gi|183209086|gb|ACC56484.1| Outer membrane protein [Acinetobacter baumannii ACICU]
 gi|332739345|gb|EGJ70201.1| OmpA family protein [Acinetobacter baumannii 6014059]
          Length = 471

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPDASLEWVGDKITLKAGDAAALEALTAKVKALVP 318

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469


>gi|108757927|ref|YP_633347.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108461807|gb|ABF86992.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 476

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 70/263 (26%), Gaps = 15/263 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G  DE   P+  +     +   +     +  ++        +      ++      +  
Sbjct: 222 DGFQDEDGCPDLDNDGDGIVDTADKCPNEAGPMQNLGCPIVDKDGDGILDVDDKCPDEPE 281

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +        D     D       +                           +  L     
Sbjct: 282 DKDGFQ-DEDGCPDLDNDGDGTPDVQDKCPNEAGPTENGGCPDKDTDGDGIVDRLDACPE 340

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVL 259
                       +  +    R  I I     +   +F   S      ++  VL  + + L
Sbjct: 341 EPGVQEERGCAKQYKMVVIKRDRIEI-----KKQILFSSGSHKIYGKQSTAVLDDVAQAL 395

Query: 260 AHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             +     I I GHTD+         N RLS  RA +    L++ G+   RI  + GF  
Sbjct: 396 RDAPWIKRIRIEGHTDSM---GNDASNLRLSQRRADAVMAQLLRRGIDPGRIQAV-GFGE 451

Query: 318 HRLKIASD--PMNSANRRIDILV 338
            +    +      + NRR +  V
Sbjct: 452 TQPIAPNSTKTGRAMNRRTEFKV 474


>gi|261253627|ref|ZP_05946200.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
 gi|260937018|gb|EEX93007.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
          Length = 320

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
           S   + ++  F  +S+   PE+  +L ++ + +    +  + I G+TD+      A  N 
Sbjct: 202 SYATKVDSGNFALNSTELKPESKSLLSELVQFMEQYPQANVEITGYTDS---SGAAEYNQ 258

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            LS  RA +    L   GV   RI  +SG   +    ++D     + NRR++I V
Sbjct: 259 MLSEKRAQAVANELESQGVESSRI-TVSGEGENNPIASNDTRGGRAQNRRVEITV 312


>gi|317047826|ref|YP_004115474.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
 gi|316949443|gb|ADU68918.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
          Length = 342

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 3/200 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT                    K++      +  +         RL  L +K+   +
Sbjct: 67  KVALTGGQRSSDSDSPIPGGGDDPTKKDGEVKKVVDMDAQKRQLDDIRLNRLREKLDQLI 126

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   ++      G+ I IID +N PMF   S+   P    +L+ I  VL   
Sbjct: 127 EADPRLKALRPHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNDI 186

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              IS+ GHTD   +        NW LS DRA ++ + LM  G+   ++ ++ G A    
Sbjct: 187 PNKISLAGHTDDFQYATGDRGYSNWELSADRANASRRELMMGGLDGSKMLRVVGMADTMK 246

Query: 321 KIASDPMNSANRRIDILVED 340
                  ++ NRRI +LV +
Sbjct: 247 LKNRGGNDAVNRRISLLVLN 266



 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 1/180 (0%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
              N   ++IK++        + GSWKI YADFMT +MAFF+VMW+++  +      I +
Sbjct: 2   KHGNRPIVLIKRRKHKRHEGGH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQQLVQIAE 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF    K  +T  +   D  +P      +      +     +    K    + +    R 
Sbjct: 61  YFRTPLKVALTGGQRSSDSDSPIPGGGDDPTKKDGEVKKVVDMDAQKRQLDDIRLNRLRE 120

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
           + +    ++ +      + +    E+G  +       + + K  +  + P  ++ + A+ 
Sbjct: 121 KLDQLIEADPRLKALRPHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIA 180


>gi|83590576|ref|YP_430585.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
 gi|83573490|gb|ABC20042.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
          Length = 244

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +LA       S L    +   V    T  G++IS      + +FD+  +   P ++ +L
Sbjct: 88  DELAGFSQDLQSYLAEQGLKDQVFVTATDQGLIISFT---GSVLFDRGQATLRPASVPIL 144

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310
           QKI   L      I + G TD  P        NW LS+ RA +  +   + +G+S  R  
Sbjct: 145 QKIAGYLGQVPNYIGVAGSTDDLPINTSQFPTNWELSVIRATTVIRYFTETAGLSPSRFV 204

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            + G+  +     ++       NRR+DI++    
Sbjct: 205 AL-GYGQYHPLFPNNSEEDRRKNRRVDIIIYKEN 237



 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 6/94 (6%)

Query: 16  IIKKKVAID------DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           I K+  A +              W + YAD +T+LMAFF+VM+ ++  D    + + Q  
Sbjct: 3   IFKRLQAGEENQGSSHAGAGSMRWLLTYADLITLLMAFFIVMYAVSKVDMARYQQLAQAL 62

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           +    +   +                     S D
Sbjct: 63  SQIFTSSAGSMVLPELGNGNQVTPPDELAGFSQD 96


>gi|300690749|ref|YP_003751744.1| outer membrane lipoprotein [Ralstonia solanacearum PSI07]
 gi|299077809|emb|CBJ50447.1| putative outer membrane lipoprotein [Ralstonia solanacearum PSI07]
          Length = 209

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + E L    E   ++ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAVIKPSFRGPLDSVAETLTQHPELAANVVGHTDST---GNPNYNMSLSQR 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           RA S    L   GV+ +R++   G    +    +        NRR++I ++  QG
Sbjct: 156 RAQSVTSYLTDRGVARNRLTA-EGRGQTQPVGDNATEAGRSQNRRVEIYLKPIQG 209


>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
 gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
          Length = 344

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            I I +     +F+ + S       +    I  +L   +  +++ GHTD+   +     N
Sbjct: 225 RIVIDENLGGALFEFNKSEIRNTAAIQ-PVIDVLLEDPSLYVNVIGHTDS---KGSEEYN 280

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            RLS  RA    + L   GVS  RI  + G    +    +      + NRR++ ++ + Q
Sbjct: 281 QRLSQTRANVVAKYLNSKGVSLSRIK-VFGMGEDQPVADNSTEEGRAQNRRVEFIISNSQ 339


>gi|237815623|ref|ZP_04594620.1| OmpA family protein [Brucella abortus str. 2308 A]
 gi|237788921|gb|EEP63132.1| OmpA family protein [Brucella abortus str. 2308 A]
          Length = 243

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 212

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +  +++      + NRR++I +   +G
Sbjct: 213 GASQPIVSNATPEGRAQNRRVEIQISPLRG 242


>gi|170737030|ref|YP_001778290.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169819218|gb|ACA93800.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 340

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 4/208 (1%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +     +++L  DS+         +     +   ++     + E           + +  
Sbjct: 86  KMDAMVESALYDDSDMLAGAPLGPNTHALQDTLASHVAVDEAGEVKRGQPMADSREAMDV 145

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                        ++  V    T  G+ + + D     +F    ++P      +L K+G 
Sbjct: 146 LAERVRKLGKDAGVLDNVQAIVTPMGLRVMLHDTEKRGVFVSGGAVPSEPFRPMLIKLGA 205

Query: 258 VLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           ++      + + GHTD+ P+RN     R NW LS+DRA SA   +++ GV+ +++ ++ G
Sbjct: 206 LMGSIGNPLFVMGHTDSVPYRNSDSGSRSNWDLSVDRAMSARSWVLQGGVNSEQVMQVIG 265

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
            A     + ++P  + NRRI+ LV   +
Sbjct: 266 MADRAPLV-NNPRAAINRRIEFLVLTPE 292



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 47/134 (35%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           I+K+ +  D   ++ G WK+ +ADF   L+  F+++W ++A D++T++ ++        +
Sbjct: 38  IVKRPLRRDYDDDHDGGWKVAFADFCLALLCVFMLLWALSARDEETRRKMDAMVESALYD 97

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                 G     N           +++DE            S             +   +
Sbjct: 98  DSDMLAGAPLGPNTHALQDTLASHVAVDEAGEVKRGQPMADSREAMDVLAERVRKLGKDA 157

Query: 136 NSQQSEHCKNSLTR 149
               +     +   
Sbjct: 158 GVLDNVQAIVTPMG 171


>gi|254227754|ref|ZP_04921185.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262395797|ref|YP_003287650.1| outer membrane protein A precursor [Vibrio sp. Ex25]
 gi|151939796|gb|EDN58623.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262339391|gb|ACY53185.1| outer membrane protein A precursor [Vibrio sp. Ex25]
          Length = 330

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPATYNQKLS 267

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA S    L  +G+  DR+  + G         +        NRR++++V
Sbjct: 268 ERRAQSVADYLTAAGIDSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318


>gi|300855151|ref|YP_003780135.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
           13528]
 gi|300435266|gb|ADK15033.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
           13528]
          Length = 249

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 8/205 (3%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K +            + +      +    +     S +K      K     + +   
Sbjct: 41  DQEKLAKISQQFNVIFSGEKSIQNNGGSSTNQFIETGESTDKPDESAGKTEQDTMNEIKK 100

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  + +  D     V  E ++ G+ ISI +     +F+   +  L     +L  I E++ 
Sbjct: 101 TLDAKIKQDGYDDKVKVEISKDGLGISIQEA---ILFNSGDAEVLTHIHPLLISISEMIR 157

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
           +    I I GHTD  P  N   R NW LS  RA +    ++K+ G++  ++  I  ++ +
Sbjct: 158 NLDNNIRIAGHTDNVPIHNSKFRSNWDLSAMRAINVMNFMVKNGGINITKV-SIQAYSEY 216

Query: 319 RLKIASDP--MNSANRRIDILVEDR 341
           + K  +      + NRR++I +  +
Sbjct: 217 QPKSTNLTKEGRAQNRRVEIFIVRK 241



 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 44/129 (34%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W I YAD +T+L+A F+VM+ I+  D +    I Q FN       + 
Sbjct: 3   KKRQHHEEHVDETWLIPYADMLTLLLALFIVMFAISKVDQEKLAKISQQFNVIFSGEKSI 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                   N    + ++          T+     +I  T   K  Q   ++   +  S+ 
Sbjct: 63  QNNGGSSTNQFIETGESTDKPDESAGKTEQDTMNEIKKTLDAKIKQDGYDDKVKVEISKD 122

Query: 140 SEHCKNSLT 148
                    
Sbjct: 123 GLGISIQEA 131


>gi|224824498|ref|ZP_03697605.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224602991|gb|EEG09167.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 218

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 10/148 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L        V  +     I +++ D      F  +S+   P     L  + 
Sbjct: 76  AYMDYQEKQLRDKLANTQVGVDRVGDQIKLTMPDNIT---FAVNSAELQPSVRTALTDVS 132

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +   ++ GHTD +        N  LS  RA S    L   GV+  RI+ + G+
Sbjct: 133 NVLTQYPDTTITVAGHTDNT---GNVAYNQTLSQRRAQSVAGFLQSRGVAGSRINPV-GY 188

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
             ++   ++      + NRR++IL+  +
Sbjct: 189 GQNQPIASNTTAEGRAKNRRVEILINPK 216


>gi|158422120|ref|YP_001523412.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
 gi|158329009|dbj|BAF86494.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
          Length = 339

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 14/271 (5%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            +      + S+     +  +        LK  +                     Q +  
Sbjct: 70  LERATGQSQDSELAALRASLQATEAERDRLKAAAGPAPTGPDPSREAALAREVDMQKDVA 129

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +L +     + +        ++ +  N       + +       KRL     +    L
Sbjct: 130 SRALAQIELLNQQIAALRRQMAALEEALNVSEKRDQESQTKIADLGKRLNVALAQRVQEL 189

Query: 204 SGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259
           S   ++   +       R  I I       ++   FD+ S+ P PE +  L K+   +  
Sbjct: 190 SRFRSEFFGRLRDILGNRPDIRIVGDRFVFQSEVFFDRGSATPRPEALAELDKLASAILE 249

Query: 260 ------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                       + I GHTD+ P        NW LS  RA +  Q L+  GV    +   
Sbjct: 250 LERQIPPDINWALRIDGHTDSRPISTPQFPSNWELSAARAIAVAQYLISKGVQPRHLIAA 309

Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            GF  ++           + NRRI++ + +R
Sbjct: 310 -GFGEYQPIDTGTSDESMARNRRIELKLTER 339


>gi|300703368|ref|YP_003744970.1| outer membrane lipoprotein [Ralstonia solanacearum CFBP2957]
 gi|299071031|emb|CBJ42340.1| putative outer membrane lipoprotein [Ralstonia solanacearum
           CFBP2957]
          Length = 209

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S++  P     L  + E L    E   S+ GHTD++        N  LS  
Sbjct: 99  PSQVSFDTDSAMIKPSFRGPLDSVAETLTQHPELAASVVGHTDST---GNPNYNMSLSQR 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           RA S    L   GV+  R++   G    +    +      + NRR++I ++  QG
Sbjct: 156 RAQSVTSYLTDRGVARTRLTA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209


>gi|17987069|ref|NP_539703.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
 gi|261222366|ref|ZP_05936647.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
 gi|261325291|ref|ZP_05964488.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
 gi|265988867|ref|ZP_06101424.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|265991281|ref|ZP_06103838.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995118|ref|ZP_06107675.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998331|ref|ZP_06110888.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
 gi|265999432|ref|ZP_05466341.2| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982726|gb|AAL51967.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
 gi|260920950|gb|EEX87603.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
 gi|261301271|gb|EEY04768.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
 gi|262552799|gb|EEZ08789.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
 gi|262766231|gb|EEZ12020.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002065|gb|EEZ14640.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093937|gb|EEZ17871.1| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264661064|gb|EEZ31325.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|326409224|gb|ADZ66289.1| OmpA/MotB domain-containing protein [Brucella melitensis M28]
 gi|326538933|gb|ADZ87148.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
          Length = 232

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 89  NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 201

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR++I +   +G
Sbjct: 202 GASQPIASNATPEGRAQNRRVEIQISPLRG 231


>gi|26988234|ref|NP_743659.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24982975|gb|AAN67123.1|AE016341_6 OmpA family protein [Pseudomonas putida KT2440]
          Length = 263

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        +    + +    +   +   +     A
Sbjct: 39  QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EAELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    + G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250


>gi|262404553|ref|ZP_06081108.1| outer membrane protein A precursor [Vibrio sp. RC586]
 gi|262349585|gb|EEY98723.1| outer membrane protein A precursor [Vibrio sp. RC586]
          Length = 321

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P     L K+   L    +  + + GHTD++        N +LS  R
Sbjct: 208 DSGTFANNSAQLKPAMESKLDKLVGYLKQYPQATVEVVGHTDST---GSDAYNQKLSEKR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   G+   RI+   G        ++        NRR+++++
Sbjct: 265 AQAVAKALEAQGIEASRITA-KGQGESNPIASNATAEGREKNRRVELVI 312


>gi|261378300|ref|ZP_05982873.1| OmpA family protein [Neisseria cinerea ATCC 14685]
 gi|269145394|gb|EEZ71812.1| OmpA family protein [Neisseria cinerea ATCC 14685]
          Length = 225

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        V  +     I + + +      F   S++        L    +
Sbjct: 76  YMDYQEQRLRQSLAGTQVQVQRQGNQIKLVMPENVT---FATGSAVLSDNAQFALNTAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQTVAYYLQSRGVAASRL-AVYGYG 188

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 189 SHMPVASNATAEGRAQNRRVEILINPDQ 216


>gi|163781627|ref|ZP_02176627.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882847|gb|EDP76351.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
          Length = 235

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 9/155 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           R K+  +L K+I+     L++  I    L   T   + ++        ++   S  P P+
Sbjct: 84  RVKKFAELKKEITKIKEELLSMGIEADYLVTGTCMKLRVN-----TNRLYPLGSEEPYPQ 138

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306
              +   +   L   +  I+  G+TD  P  N     NW LS  RA S  ++ +  G  +
Sbjct: 139 AKELFLNMCSRLKPFSLPITFEGYTDNMPISNPRFPSNWELSAMRAVSVLRLFITCGYPQ 198

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           + +S + G+  H     +D       NRRI+  ++
Sbjct: 199 ELLSAV-GYGEHHPIAPNDTPANRERNRRIEFCIK 232



 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLMTA 79
             ++      +W   + D M++L+ FF++++ ++    +   + ++     FG   +  
Sbjct: 4  KKKEEECPKAPAWLTSFGDLMSLLLTFFILLYSMSIISLEKFYQVLKGLIEAFGGKQVIF 63

Query: 80 SKGIFDEQNPPE 91
          S+G   + +   
Sbjct: 64 SEGGALKASRIP 75


>gi|283853398|ref|ZP_06370644.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283571211|gb|EFC19225.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 301

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 103/329 (31%), Gaps = 46/329 (13%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K   +D       W I  AD MT+L+ FFL++  ++  D    + +             
Sbjct: 8   RKRRPEDDD----LWPISMADMMTLLLCFFLLLVAVSHVDLGRYERVADSMQKAMIPDKP 63

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           ASK    E  P    +                  ++   ++       +          +
Sbjct: 64  ASKPKAPEPQPAPPKAPAPQAAPKSPPPPPEPASVRSKVSHTTLASDPVPPLEPEKPKPE 123

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                       +       + T                           KK L+D+ K+
Sbjct: 124 AKPAEPAPPQAAAVPAGPEAERTGP------------------------TKKSLEDIRKE 159

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++  L     D     V       G+ +++           +S+      + +L+ I   
Sbjct: 160 LAGKL-----DITSGAVEILPRENGVELNLRGAAFFD---AASADIKSGGLPLLRDIAAT 211

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L+ +   +++ GHTD  P  +     NW LS  RA    ++L+  GV    + ++ G A 
Sbjct: 212 LSGTPYRVTVEGHTDNRPIESWLYPSNWELSSARASRVARLLIDGGVPAGHM-RVEGLAD 270

Query: 318 HRLKIASDPMN--------SANRRIDILV 338
            +    +            + NRR+ ILV
Sbjct: 271 TQPVAPNTDPAGRSIAENQARNRRVVILV 299


>gi|253774745|ref|YP_003037576.1| hypothetical protein ECBD_3391 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300929521|ref|ZP_07144987.1| OmpA family protein [Escherichia coli MS 187-1]
 gi|253325789|gb|ACT30391.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|300462520|gb|EFK26013.1| OmpA family protein [Escherichia coli MS 187-1]
          Length = 211

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/172 (29%), Positives = 87/172 (50%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E          +  A+ +KK   +L +  +S  +     ++   +  E    G+ + I 
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIK 63

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   DNW LS 
Sbjct: 64  DDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSG 123

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           DRA SA +VL ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 124 DRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175


>gi|157370029|ref|YP_001478018.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
 gi|157321793|gb|ABV40890.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
          Length = 569

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 51/185 (27%), Gaps = 9/185 (4%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
             D                ++    A         L       L   + D I   V    
Sbjct: 359 PIDDYGPKTDAVAVLREDAAQLDDQARNGVPTRMSLGLYQGERLRMPLLDAIRSYVPPPL 418

Query: 220 TRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275
                      I+   +  +FD         +  +L      +       I + GHTD +
Sbjct: 419 PSKPQPKPAPKIVRLDSMSLFDSGKYALKAGSTKMLINSLVGIKAKPGWLIVVAGHTDNT 478

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                   N  LS  RA +    +  +G   +    + G+   R    +D     + NRR
Sbjct: 479 ---GNPALNQTLSQKRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRR 535

Query: 334 IDILV 338
           ++I +
Sbjct: 536 VEISL 540


>gi|28869189|ref|NP_791808.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852429|gb|AAO55503.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 295

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   G++  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  + +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|227112504|ref|ZP_03826160.1| flagellar motor protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227326903|ref|ZP_03830927.1| flagellar motor protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 351

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT  S+                +++      +  + +     + RL  L +++   +
Sbjct: 65  KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +L E    G+ I IID +N PMF   S+   P    +L+ I  +L   
Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR- 319
              +SI GHTD   +        NW LS DRA ++ + L+  G+S+ ++ ++ G A    
Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMS 244

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
           LK A+   ++ NRRI +LV  RQ
Sbjct: 245 LKQATGGNDAINRRISLLVLSRQ 267



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 70/177 (39%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T+     D  +P      +      +      + +++      +    R   +
Sbjct: 62  TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
               ++ +      + L    ++G  +       + + K  +  + P  ++ + A+ 
Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178


>gi|114321225|ref|YP_742908.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227619|gb|ABI57418.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 251

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 14/202 (6%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
             ++   + E G    ++        +    +  P S   +     ++   D A      
Sbjct: 59  EDHAGVPEQEPGLFAGQAGVPSVLEGEFGPLYALPESPAPVADPATEEDPVDQAM----- 113

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                 D +   +        I   I D+    +F    +    + + VL ++  VL  S
Sbjct: 114 --ADELDALGDDIDVLVEAGSISFRISDE---ILFPSGEAELTDQGLQVLGQLIPVLEVS 168

Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I++ GHTD  P        NW LS  RA    + L   G++  R+   +G A  R  
Sbjct: 169 DHRITVEGHTDNVPIATERFPSNWELSTGRATRVLRFLEAEGIASTRLQA-TGLADTRPI 227

Query: 322 IASDPM--NSANRRIDILVEDR 341
             +      + NRR++++++  
Sbjct: 228 AGNATAEGRAQNRRVELVLQTP 249



 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 24/86 (27%), Gaps = 4/86 (4%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA----TDDDTKKAIEQYFNPFGKNLMT 78
                    SW +VY D MT+L+  F+VM           +                   
Sbjct: 26  EPAEDTEGESWLLVYLDVMTLLLVMFVVMLAFTEDHAGVPEQEPGLFAGQAGVPSVLEGE 85

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDE 104
                   ++P   +     +  +D+
Sbjct: 86  FGPLYALPESPAPVADPATEEDPVDQ 111


>gi|302343053|ref|YP_003807582.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639666|gb|ADK84988.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 247

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   +  +      + +    +   V       G+ + +   +    F+   +    E
Sbjct: 88  EARAAMESRQMSEQVQNFVNETGLGSEVNVNAGNKGVRLRV---KGHLFFEPGGAEIRQE 144

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306
              +L+ I +V       +++ GHTD  P        NW LS  RA +  + L   GV E
Sbjct: 145 AKKLLEGIAKVTKKFDFYLTVEGHTDDQPISTPRFPSNWELSAARAAAVLRYLAGDGVPE 204

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            R+S I G+A      A+        NRR++ +
Sbjct: 205 KRMSAI-GYASSFPIAANTSEAGRNKNRRVEFV 236


>gi|299134013|ref|ZP_07027206.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
 gi|298590760|gb|EFI50962.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
          Length = 464

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 87/276 (31%), Gaps = 9/276 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           +      KNL        +    P    Q   D           V             +R
Sbjct: 195 EAIAAALKNLPEGYTVEKNALYAPPYLFQVNKDPVATTLALSGYVPDNNAHAAIVSAIER 254

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
               +      + S          +                 ++ N  L   +       
Sbjct: 255 KFVGVKIEDKLKASAGAPQGFLAATMTALSALSRLSTGTLTIQDRNVTLSGDALYPGANA 314

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  + L     +     + L    +   V     +  +   +   + T  F+   ++  P
Sbjct: 315 RISEELAAKLPQGWKQKAELTVKPVAAPVNATICQQLLTGLL--AKGTIQFETGKAVIDP 372

Query: 247 ETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           ++  +L ++ E VL   T  I I GHTD+         N  LS+ RA +     +K+GV 
Sbjct: 373 DSAGLLDRLIEAVLRCPTSQIEIEGHTDS---NGEKEANLALSMRRAQAVADYFIKAGVP 429

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           ++RIS + GF   R   ++D     + NRRI+ +V 
Sbjct: 430 KERISAV-GFGSERPVASNDTEEGKAQNRRIEFVVR 464


>gi|262041860|ref|ZP_06015044.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040765|gb|EEW41852.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 565

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   + + ++        + V+ +  +    I +    +  +FD   S   P +  +L  
Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSALKPGSTKLLVN 453

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
               +       I + GHTD+       R N +LSL RA +    +  +G   +    + 
Sbjct: 454 SLLGIKVKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+   R   +++     + NRR++I +  ++
Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541


>gi|294504689|ref|YP_003568751.1| putative OmpA family protein [Yersinia pestis Z176003]
 gi|262362751|gb|ACY59472.1| putative OmpA family protein [Yersinia pestis D106004]
 gi|294355148|gb|ADE65489.1| putative OmpA family protein [Yersinia pestis Z176003]
          Length = 186

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 76  KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 135

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 136 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 184


>gi|153949967|ref|YP_001400351.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152961462|gb|ABS48923.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
          Length = 458

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 348 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 407

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 408 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 456


>gi|330807883|ref|YP_004352345.1| hypothetical protein PSEBR_a1163 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375991|gb|AEA67341.1| Conserved hypothetical protein; putative outer membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 231

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+ + +   P    VL  +   L    ST  + + GHTD+         N RLS  RA S
Sbjct: 127 FEFNKATLTPADKDVLSGVATRLKQETSTTQLRVTGHTDSV---GSDAYNQRLSEKRANS 183

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             Q L+ +GV       +SG    +    +      + NRR +I +  
Sbjct: 184 VVQYLVDNGVPRASFVSVSGAGESQPVADNKTADGRAMNRRTEIKINR 231


>gi|298504468|gb|ADI83191.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
          Length = 429

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++  P+    ++K  + L    +  ++  GHTD+         N +LS  RA + 
Sbjct: 321 FDTDKAVVKPQYNDEIKKAADFLKEYPDATAVIEGHTDSV---GSDAYNQKLSERRAKAV 377

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            + L+   G+S  R+S   GF   +    +        NRR+  +++
Sbjct: 378 MKYLVDKFGISAKRLSA-KGFGESKPIADNATEEGRYKNRRVVAVID 423


>gi|39995468|ref|NP_951419.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39982231|gb|AAR33692.1| OmpA domain protein [Geobacter sulfurreducens PCA]
          Length = 429

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++  P+    ++K  + L    +  ++  GHTD+         N +LS  RA + 
Sbjct: 321 FDTDKAVVKPQYNDEIKKAADFLKEYPDATAVIEGHTDSV---GSDAYNQKLSERRAKAV 377

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            + L+   G+S  R+S   GF   +    +        NRR+  +++
Sbjct: 378 MKYLVDKFGISAKRLSA-KGFGESKPIADNATEEGRYKNRRVVAVID 423


>gi|51596980|ref|YP_071171.1| OmpA/MotB family protein [Yersinia pseudotuberculosis IP 32953]
 gi|170023725|ref|YP_001720230.1| type VI secretion system OmpA/MotB family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186896063|ref|YP_001873175.1| type VI secretion system OmpA/MotB family protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51590262|emb|CAH21899.1| possible OmpA/MotB family protein [Yersinia pseudotuberculosis IP
           32953]
 gi|169750259|gb|ACA67777.1| type VI secretion system OmpA/MotB family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186699089|gb|ACC89718.1| type VI secretion system OmpA/MotB family protein [Yersinia
           pseudotuberculosis PB1/+]
          Length = 458

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE I V++++ + +      I I GHTD+ P  +    +N  LS  
Sbjct: 348 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 407

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + + ++G+  D+I +  G    +   ++D     S NRR++I V
Sbjct: 408 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 456


>gi|260460699|ref|ZP_05808949.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259033276|gb|EEW34537.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 216

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L       GV    +   I++++        F+       P    VL  +  V
Sbjct: 77  MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNSDQDAVKPGFYQVLNSVALV 133

Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L    +    + GHTD++      + N+ LS  RA +    L   GV + R   ++GF  
Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLAGQGVDQRRF-AVTGFGK 189

Query: 318 HRLKIASDP--MNSANRRIDILV 338
            R   ++      + NRR++I +
Sbjct: 190 TRPVASNATSEGRAQNRRVEIQL 212


>gi|15964027|ref|NP_384380.1| hypothetical protein SMc00354 [Sinorhizobium meliloti 1021]
 gi|15073203|emb|CAC41711.1| Probable porin [Sinorhizobium meliloti 1021]
          Length = 221

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 11/169 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
               + A         +   +    S L A     GV        I++++        F 
Sbjct: 60  DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 116

Query: 239 KSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                 +P     L  +  VL   +  +I + GHTD++     A  N  LS  RA S   
Sbjct: 117 TDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 173

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343
            L   GV + R+S + G+   R   ++      + NRR++I +   +QG
Sbjct: 174 YLASRGVDQRRMSAV-GYGLERPIASNATEVGRAQNRRVEISIAPIKQG 221


>gi|51597618|ref|YP_071809.1| hypothetical protein YPTB3318 [Yersinia pseudotuberculosis IP
           32953]
 gi|51590900|emb|CAH22556.1| Putative chemotaxis membrane protein [Yersinia pseudotuberculosis
           IP 32953]
          Length = 264

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 4/230 (1%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           + + S  ++++     N     +          S +   +    +  +   +++ +    
Sbjct: 11  VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGNEQAKETKSNLAI 70

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    + +  K +  +++L++ I    S     N    +  E    G+ I I D +
Sbjct: 71  EVPEPEKSLEEVVDKSRHEMEELSRIIMQITSAY---NAQSNLQMEVVPQGLRILIQDDQ 127

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291
              MF +SS++  P    +L ++          I I GHTDAS +R+    +NW LS +R
Sbjct: 128 QRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNKIIITGHTDASRYRDQLLYNNWNLSGER 187

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A  A++ L+  G+ E R+ +I+  A   L   +DP+ + NRRI+I+V  +
Sbjct: 188 ALMAHKALVNGGLDEGRVLQINTMADQMLLDPTDPLAAKNRRIEIMVLTK 237


>gi|258621036|ref|ZP_05716070.1| outer membrane protein OmpA [Vibrio mimicus VM573]
 gi|262166295|ref|ZP_06034032.1| outer membrane protein A precursor [Vibrio mimicus VM223]
 gi|258586424|gb|EEW11139.1| outer membrane protein OmpA [Vibrio mimicus VM573]
 gi|262026011|gb|EEY44679.1| outer membrane protein A precursor [Vibrio mimicus VM223]
          Length = 322

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P     L K+   L    +  + + GHTD+         N +LS  R
Sbjct: 209 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSEAYNQKLSEKR 265

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   GV   RI+   G        ++        NRR+++++
Sbjct: 266 AQAVAKALEAQGVDAARITA-KGQGESNPIASNATAEGREKNRRVELVI 313


>gi|319787865|ref|YP_004147340.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317466377|gb|ADV28109.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 369

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 25/288 (8%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
                + +NP+    + A     +   P   S   + D          +V  K+G+  Q 
Sbjct: 98  FIQAGRSWNPYLLFGIGAQFSEEEYVVPAPNSPFERAD---------GNVAAKVGAGLQT 148

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
               R+         +   +   N      ++         +   I         P +  
Sbjct: 149 TFDSRVAVRAELAYRADFDDQSINPARAGRDEDYFGDLLASIGVVIPLGPAAVAAPPAPA 208

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                     L D    +++           + +  +     + I +        FD   
Sbjct: 209 PTPVAPSCADLDDDGDGVNNCDDKCPGSQAGQAIGPDGCPVPVSIDL----KGVNFDYDK 264

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P+ + +L +  E+L    +  + + GHTD+         N +LS  RA + Y  L 
Sbjct: 265 ATLRPDAVAILSEAAEILKRYPDLRVEVAGHTDSR---GTDAYNQKLSERRAKAVYDYLT 321

Query: 301 KSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
            +G+   R+    G+   R    +            + NRR ++ V++
Sbjct: 322 SNGIDASRLVGPIGYGESRPIAPNANPDGSDNPEGRAKNRRTELNVQN 369


>gi|289627957|ref|ZP_06460911.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647094|ref|ZP_06478437.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298487807|ref|ZP_07005848.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157899|gb|EFH98978.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330866472|gb|EGH01181.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 295

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    +IP  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++ A +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K I   +  P   S    +  + +    ++   +      +   Q + +    L 
Sbjct: 59  TERTMKPIPIGEQRP--VSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 136 NSQQ 139
            S Q
Sbjct: 117 KSDQ 120


>gi|326795346|ref|YP_004313166.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326546110|gb|ADZ91330.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 254

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 88/216 (40%), Gaps = 12/216 (5%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +  LS+ Q + + + +LTR +        +  ++ +  +         SKE I  ++R  
Sbjct: 44  VSALSSIQIALNSEGALTRLNPTQYSGGGTEIIKPADPQLATNDDLTYSKEPIDDVER-- 101

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             + + +  + T +   A+N+   +        I I +       +F+   +  L     
Sbjct: 102 --EHVKEIANDTANKFAAENLDSQIAVFEDGEKITIRV---DGASLFESGEADVLWSAEP 156

Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308
           + + +  +     +    I+GHTD  P        NW LS  RA +  +  ++ G+  +R
Sbjct: 157 IFEALYRIFVTYPDYNISIKGHTDNIPINTTRFPSNWELSAIRATTTLRYFLEKGIPPER 216

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           ++  +G+A     + +D     + NRR + +++  +
Sbjct: 217 MTA-TGYADVIPLVPNDTPEHRAQNRRAEFVLQRNK 251



 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 6/156 (3%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
           +     G W + YAD M++L+ FF++++ ++   + T  +               S+G  
Sbjct: 7   EEEEVAG-WIVTYADLMSLLLVFFILLYSLSKLTESTLVSALSSIQIALN-----SEGAL 60

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
              NP + S      +   +     + DL           +     I   + ++ +    
Sbjct: 61  TRLNPTQYSGGGTEIIKPADPQLATNDDLTYSKEPIDDVEREHVKEIANDTANKFAAENL 120

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +S     E G+ +    D        E   L     
Sbjct: 121 DSQIAVFEDGEKITIRVDGASLFESGEADVLWSAEP 156


>gi|315287740|gb|EFU47143.1| OmpA family protein [Escherichia coli MS 110-3]
          Length = 211

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  VL      I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ E+++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|298369093|ref|ZP_06980411.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283096|gb|EFI24583.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 417

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +   K V  +       ++I+      +F+  S+    +   VL  +G+ L      
Sbjct: 257 LENEIARKLVSVKDDPDRSTVTIL---GDGLFESGSTSIQDQYYPVLAAVGQALNSVDGQ 313

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + G+TD +P +++    NW LS  RA +  ++L+    +     +  G         +
Sbjct: 314 VVVTGYTDNTPIQSLEYPSNWHLSQGRADAVKEILLSYMRNGANRIRSEGRGSTNPVAPN 373

Query: 325 DPMN--SANRRIDILV 338
           D     + NRR++I +
Sbjct: 374 DSPENKAKNRRVEITL 389


>gi|71737581|ref|YP_275515.1| flagellar motor protein MotD [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71558134|gb|AAZ37345.1| chemotaxis protein MotB [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|283133060|dbj|BAI63827.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci]
 gi|320325140|gb|EFW81209.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329399|gb|EFW85392.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330889033|gb|EGH21694.1| flagellar motor protein MotD [Pseudomonas syringae pv. mori str.
           301020]
 gi|330986516|gb|EGH84619.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 295

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    +IP  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++ A +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K I   +  P   S    +  + +    ++   +      +   Q + +    L 
Sbjct: 59  TERTMKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 136 NSQQ 139
            S Q
Sbjct: 117 KSDQ 120


>gi|253688988|ref|YP_003018178.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755566|gb|ACT13642.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 350

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT  S+                +++      +  + +     + RL  L +++   +
Sbjct: 65  KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +L E    G+ I IID +N PMF   S+   P    +L+ I  +L   
Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-R 319
              +SI GHTD   +        NW LS DRA ++ + L+  G+S+ ++ ++ G A    
Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMN 244

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
           LK A+   ++ NRRI +LV  RQ
Sbjct: 245 LKQATGGNDAINRRISLLVLSRQ 267



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 70/177 (39%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T+     D  +P      +      +      + +++      +    R   +
Sbjct: 62  TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
               ++ +      + L    ++G  +       + + K  +  + P  ++ + A+ 
Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178


>gi|152980650|ref|YP_001353771.1| flagellar motor protein MotD [Janthinobacterium sp. Marseille]
 gi|151280727|gb|ABR89137.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
          Length = 259

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 10/195 (5%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                     K    + +         P     + +  + K R+  +A+ I   ++ LV+
Sbjct: 57  GGVAAKTQTIKDPVSQNAPILPLPIPTPAQRANEAVVKREKARMTSIARDILKAMAPLVS 116

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 V    T  G+ + I       +F    +    ++   L+ + +VL      I +
Sbjct: 117 QG---KVRVTQTNRGVSVEINAS---VLFAPGEAKLNAQSEAALRAVAQVLKDVDNDIQV 170

Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
            GHTD +P  N     NW LS  RA S  ++ + +GV+E R+  + G   +    ++D  
Sbjct: 171 EGHTDNTPINNTMFPSNWELSAVRASSVVRLFLANGVAEKRLVAM-GHGANLPVDSNDTT 229

Query: 328 NS--ANRRIDILVED 340
                NRR+ +++  
Sbjct: 230 EGRLRNRRVQLMILS 244


>gi|300921970|ref|ZP_07138116.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|301325438|ref|ZP_07218924.1| OmpA family protein [Escherichia coli MS 78-1]
 gi|300421640|gb|EFK04951.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|300847736|gb|EFK75496.1| OmpA family protein [Escherichia coli MS 78-1]
          Length = 211

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175


>gi|114778645|ref|ZP_01453461.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
 gi|114551110|gb|EAU53671.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
          Length = 226

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 11/152 (7%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           + K+ +     L A+     +  E      + I++    +   FD +S+   P     L 
Sbjct: 79  MDKQQAEFNRQLAAEQQAHQIEVERLQNENLKITMN---SEISFDYNSAQLKPAFTDTLN 135

Query: 254 KIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           K+ ++L       I I GHTD        + N +LS  RA +    L   GV   RI   
Sbjct: 136 KVADILKRYPRSTIRITGHTDNR---GSTQYNQQLSEQRAQAVKWYLSDRGVDPRRIIA- 191

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            G    + +  +D       NRR+++L+   Q
Sbjct: 192 EGRGELQPRATNDTEAGRQLNRRVEMLIVPDQ 223


>gi|213967534|ref|ZP_03395682.1| motB protein [Pseudomonas syringae pv. tomato T1]
 gi|301382871|ref|ZP_07231289.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062803|ref|ZP_07254344.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato K40]
 gi|302131302|ref|ZP_07257292.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213927835|gb|EEB61382.1| motB protein [Pseudomonas syringae pv. tomato T1]
          Length = 295

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   G++  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  I +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|162448390|ref|YP_001610757.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
 gi|161158972|emb|CAN90277.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
          Length = 617

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 73/266 (27%), Gaps = 14/266 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
               DE    +R         I     K       G  ++      ++        + + 
Sbjct: 354 PSDRDEDGFLDRVDACPDTPGIANDDPKKHGCPPPGDRDKDGITDDVDACPDEAGPANED 413

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                        G  +  + D    I                      +  QD      
Sbjct: 414 PKKHGCPPPPDRDGDGVIDAEDACPDIPGIRTSDPATNGCPGDRDGDTVRDDQDACPD-E 472

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V    T T I+I          FD   +     +  +L ++  VL 
Sbjct: 473 KGKPDPDPTKNGCPVAVRMTETEIVI-----LQQVQFDTGKATIKKVSDPLLDEVAGVLK 527

Query: 261 HSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              E+  I   GHTD          N +LS  RA S  + L++ G+  +R++   G+   
Sbjct: 528 EHPEITKIEVQGHTDPR---GGRAYNIKLSQARAESVTKALVQRGIEAERLAS-KGYGPD 583

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
                +D       NRR+   + +++
Sbjct: 584 VPIAENDTDEGRQKNRRVQFKILEKK 609


>gi|209883793|ref|YP_002287650.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
 gi|209871989|gb|ACI91785.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
          Length = 464

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   ++  P+++ +L ++ EV L  ST  I I GHTD+      A  N  LS  RA S 
Sbjct: 363 FETGKAVIDPDSVGLLDRLVEVVLRCSTSQIEITGHTDS---NGDAESNLALSNRRAQSV 419

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
              L+K+GV  +RI+ I GF   R    +D     + NRRI+ LV+
Sbjct: 420 ADYLIKAGVPSERITAI-GFGSGRPIAPNDTEEGKAQNRRIEFLVK 464


>gi|229172375|ref|ZP_04299934.1| OmpA/MotB domain protein [Bacillus cereus MM3]
 gi|228610846|gb|EEK68109.1| OmpA/MotB domain protein [Bacillus cereus MM3]
          Length = 227

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L +  +    + + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSQMLEKFSDVEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMVSKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|190572988|ref|YP_001970833.1| putative outer membrane protein [Stenotrophomonas maltophilia
           K279a]
 gi|190010910|emb|CAQ44519.1| putative outer membrane protein [Stenotrophomonas maltophilia
           K279a]
          Length = 366

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L D    +++           + +  +     + I +        FD   S   P+ +
Sbjct: 214 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDL----KGVNFDFDKSNLRPDAV 269

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +  E+L    +  + + GHTD+   +     N +LS  RA + Y  L K+GV   R
Sbjct: 270 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 326

Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
           +    G+   R    +            + NRR ++ V++
Sbjct: 327 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 366


>gi|307565706|ref|ZP_07628175.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
 gi|307345532|gb|EFN90900.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
          Length = 286

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 14/242 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           + + K+ +  Q  +     NN    S   Q    K S             S +       
Sbjct: 31  TENNKLTNDYQSAKETIAANNARIKSLEDQLAQAKESAAALQGSLDKSLTSANYNNINIA 90

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +    +   ++     ++ K +   L   + + L+  ++   +K V  +  +  + IS+ 
Sbjct: 91  KLVDQINESNQYIRHLVEVKTKSDSLNMALQNNLTRSLSREELKEVDIQVLKGVVYISLA 150

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282
           D     ++   S          L KI +++         I G+TD  P           R
Sbjct: 151 DNM---LYKSGSYEINSRAEQTLSKIAKIIMDYNNYDVLIEGNTDNVPINTTNKIMANIR 207

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +NW LS  RA S    L    GV   RI+   G   +   + +D       NRR  I++ 
Sbjct: 208 NNWDLSALRATSVANYLQTRFGVDPSRITAG-GRGEYNPIVGNDTELGRQRNRRTQIIIT 266

Query: 340 DR 341
            +
Sbjct: 267 PK 268


>gi|260883956|ref|ZP_05895570.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
           C68]
 gi|297248510|ref|ZP_06932228.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
 gi|260873484|gb|EEX80553.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
           C68]
 gi|297175679|gb|EFH35026.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
          Length = 232

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 89  NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + G TD++     A  N  LS  RA S    L   G+   R   + G+
Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 201

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +  +++      + NRR++I +   +G
Sbjct: 202 GASQPIVSNATPEGRAQNRRVEIQISPLRG 231


>gi|182418680|ref|ZP_02949956.1| chemotaxis protein MotB [Clostridium butyricum 5521]
 gi|237669705|ref|ZP_04529682.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377457|gb|EDT75012.1| chemotaxis protein MotB [Clostridium butyricum 5521]
 gi|237654779|gb|EEP52342.1| putative chemotaxis MotB protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 248

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 12/207 (5%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q++  K      S        ++ ++   N             K  A   + ++  +   
Sbjct: 39  QTDKAKFQAMSKSFNQIFSGGTSMMQSDGNSIIPMDTISDGTGKSDAELEQDKMVAIKAV 98

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   ++    +     +  +    G+ I++ D     +FD   +      I +L K+  +
Sbjct: 99  MEEEITS---EGYSDAINVDINEEGLYITVQD---VALFDSGKADIHQNVIPLLSKVSAM 152

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM--KSGVSEDRISKISGF 315
           L      I I GHTD  P  N     N  LS +RA +   +L+  ++G+  ++ + I  +
Sbjct: 153 LNGLENEIKIVGHTDNVPIDNSEFHSNMDLSAERAINVRSLLVNSENGLDPEK-TSIEAW 211

Query: 316 AHHRLKIASDPM--NSANRRIDILVED 340
              + K ++D     + NRR++I+V  
Sbjct: 212 GELKPKASNDTEQGRAQNRRVEIVVSR 238



 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 40/118 (33%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +       +   +W + Y+D +T+L+A F+VM+ +  TD    +A+ + FN       + 
Sbjct: 3   RKKQHHEEHVDEAWLLPYSDMLTLLLALFIVMFAMGQTDKAKFQAMSKSFNQIFSGGTSM 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            +   +   P +  S        +    K      +       +      N+      
Sbjct: 63  MQSDGNSIIPMDTISDGTGKSDAELEQDKMVAIKAVMEEEITSEGYSDAINVDINEEG 120


>gi|312970356|ref|ZP_07784537.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
 gi|310337005|gb|EFQ02143.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
          Length = 256

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  ++N   +NW LS DRA+SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRAFSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|296313347|ref|ZP_06863288.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
 gi|296840164|gb|EFH24102.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
          Length = 225

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        V  +     I + + +      F   S++        L    +
Sbjct: 76  YMDYQEQRLRQSLTGTQVQVQRQGNQIKLVMPENVT---FATGSAVLSNNAQFALNTAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQSRGVAASRL-AVYGYG 188

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 189 SHMPVASNATAEGRAQNRRVEILINPDQ 216


>gi|171318847|ref|ZP_02907983.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171095946|gb|EDT40882.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 226

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 8/140 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L+ L A      +       GI I I  +    +F+   +  LP+   VL +I   L+  
Sbjct: 89  LASLDALKTSGRISLVRAPHGIEIGIDAK---ILFNVGDARLLPDATPVLSQIARALSEH 145

Query: 263 -TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            T  I + GHTD+ P  N     NW LS  RA S  + L   GV+  R++ I G A  + 
Sbjct: 146 ATGDILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQP 204

Query: 321 KIASD--PMNSANRRIDILV 338
            +A D  P  + NRR+ I V
Sbjct: 205 LVAGDDAPARARNRRVTIFV 224



 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
              G W I YAD +T LM  FL ++++ 
Sbjct: 24 GAQSGRWLISYADLITTLMVLFLALYVLQ 52


>gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6]
 gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6]
 gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016]
          Length = 357

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 7/146 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A+++           + +    E     +      Q N  +F   SS         L  +
Sbjct: 203 AEEVKQEEPVAEPILLAEEPKPEPKPEWVTKFSNQQYNQELFATGSSKLSAGGKQALTPL 262

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            EVL    +    I GHTD++      + N R+S  RA +    L++ GV  +++  + G
Sbjct: 263 AEVLIKYPDAEAEIVGHTDST---GSEKVNQRISEQRAQAVADYLVEQGVKAEQLK-VRG 318

Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338
               +   ++      + NRR+++ +
Sbjct: 319 AGESQPIASNKTAEGRAQNRRVEVTI 344


>gi|330504604|ref|YP_004381473.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328918890|gb|AEB59721.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 261

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  E  +     D        +    + +    +   +   +     A
Sbjct: 39  QSDPQSSKVAALETKEAQEWLNKADKAYMDKEDEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            + + +  + T  G L++  D     +FD + +   
Sbjct: 99  EAELKNSSAQRAQALLDARDAQIRKLQESLNAKQTERGTLVTFGD----VLFDFNKADLK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  + ++   L  + E    + G+TD+      A  N  LS  RA S  + L+++GV
Sbjct: 155 SSALPNITQLARFLQENPERQVIVEGYTDSV---GSASYNQGLSERRAESVRRALIRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  D   + NRR+++ + +  
Sbjct: 212 EPTRIVA-QGYGKEYPVADNSSDSGRAQNRRVEVTISNDN 250


>gi|229160692|ref|ZP_04288684.1| OmpA/MotB domain protein [Bacillus cereus R309803]
 gi|228622707|gb|EEK79541.1| OmpA/MotB domain protein [Bacillus cereus R309803]
          Length = 226

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 5   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMENTI 64

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +     +   L   V +N +  V      TG+ I I+D     +FD
Sbjct: 65  PDISHEKNDEKMVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSIVIVDNL---IFD 121

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 122 TGDASVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 181

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 182 HLIEVYHVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 226


>gi|242309709|ref|ZP_04808864.1| cadf [Helicobacter pullorum MIT 98-5489]
 gi|239523710|gb|EEQ63576.1| cadf [Helicobacter pullorum MIT 98-5489]
          Length = 308

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   PE    +Q   E +  + +   +I GHTD++        N +LS  RA S 
Sbjct: 204 FPSDSSSVNPEYYPEIQDFAEYMKQNPDKTATISGHTDST---GSEAYNQKLSERRAISV 260

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            + ++K G+S DR+    G+   +    +        NRR++
Sbjct: 261 KEEIVKQGISPDRLDT-KGYGEEKPIATNKTKEGRQANRRVE 301


>gi|163732619|ref|ZP_02140064.1| OmpA family domain protein [Roseobacter litoralis Och 149]
 gi|161393979|gb|EDQ18303.1| OmpA family domain protein [Roseobacter litoralis Och 149]
          Length = 210

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L  D     V    T   +++S+       +F   S    P+    L  +  
Sbjct: 70  NLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQDL---LFATDSFSVRPDLQNDLYTVAG 126

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L +     I + GHTD+      A  N +LS  RA S   +LM +GV+  R+  I G  
Sbjct: 127 SLQNYPASTIQVIGHTDSD---GDAAYNQQLSERRAGSVAGILMNAGVTSSRLQTI-GRG 182

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
             +   +  ++   + NRR++I++ 
Sbjct: 183 ESQPVASNLNETGKAQNRRVEIVIL 207


>gi|331681649|ref|ZP_08382282.1| MbhA protein [Escherichia coli H299]
 gi|331080851|gb|EGI52016.1| MbhA protein [Escherichia coli H299]
          Length = 261

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 21  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 81  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I   GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 141 PVFDSLDNKIIFTGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225


>gi|307301173|ref|ZP_07580935.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
 gi|307321074|ref|ZP_07600479.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306893246|gb|EFN24027.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306903629|gb|EFN34216.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
          Length = 227

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 11/169 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
               + A         +   +    S L A     GV        I++++        F 
Sbjct: 66  DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                 +P     L  +  VL   +  +I + GHTD++     A  N  LS  RA S   
Sbjct: 123 TDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 179

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343
            L   GV + R+S + G+   R   ++      + NRR++I +   +QG
Sbjct: 180 YLASRGVDQRRMSAV-GYGLERPIASNATEVGRAQNRRVEISIAPIKQG 227


>gi|197124193|ref|YP_002136144.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196174042|gb|ACG75015.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 543

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 77/231 (33%), Gaps = 15/231 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G ++  +Q   L+++   + N Q     +  +  +            +   +++  +   
Sbjct: 323 GQSHTPEQCPALDDDGDGVPNGQDRCPLEKGVAENQGCPDKDTDGDGVPDRLDRCPSVPG 382

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              ++       +     D  +               +    +  +  I       +   
Sbjct: 383 ATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKIEI-------KEKV 435

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            FD   +    ++  +L  + +++       V++I GHTD++     A  N  LS  RA 
Sbjct: 436 YFDTGKATIKAQSNALLDDVAKLIAANPQVGVVTIEGHTDST---GSAATNRALSQKRAE 492

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +    L+  GV   R+    GF   +   ++        NRR++  +++  
Sbjct: 493 AVKDYLVSKGVDASRLEA-KGFGPDQPVESNKTAKGREANRRVEFTIQNAN 542


>gi|77918162|ref|YP_355977.1| hypothetical protein Pcar_0547 [Pelobacter carbinolicus DSM 2380]
 gi|77544245|gb|ABA87807.1| conserved OmpA/MotB domain protein [Pelobacter carbinolicus DSM
           2380]
          Length = 420

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 16/244 (6%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            T+  V  +   ++       L+        +          T        L +  D  K
Sbjct: 174 GTEQPVKKEPVDSDGDGVTDDLDQCPDTPKGAPVDAKGCPLDTDGDGVFDYLDQCPDTPK 233

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
               +          + +     +         + +    L  D        +       
Sbjct: 234 GAPVDAKGCPLDTDGDGVFDYLDQCPDTPKGAPVDAKGCPLDTDGDGVFDYLDQCPDTPK 293

Query: 226 ISIIDQRNTPM-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASP 276
              +D++   +       FD   ++  PE    L K    +  +  V  I   GHTD+  
Sbjct: 294 GMNVDEKGCDLKLTLRINFDFDQAVIKPEFKGELDKAAAFVRANANVPFILLAGHTDS-- 351

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
            +     N RLS  RA +  Q L+ + G+   ++    G+   +    +D       NRR
Sbjct: 352 -KGRDTYNQRLSEKRAEAVRQALIDNYGLDAAKLKS-RGYGEAQPVATNDTEEGRYLNRR 409

Query: 334 IDIL 337
           ++++
Sbjct: 410 VELI 413


>gi|74318472|ref|YP_316212.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
 gi|74057967|gb|AAZ98407.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
          Length = 402

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 82/296 (27%), Gaps = 45/296 (15%)

Query: 52  WIINATDDDTKKAIEQ-YFNPFGKNLMTASKG------IFDEQNPPERSSQNKIDLSIDE 104
           W   + D    +      F          ++        +    P +      ID     
Sbjct: 140 WAFGSNDALRWELRADRSFGNDALPGAGLTQVQVLVGYAWGLGEPSDADGDGVIDRVEQC 199

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T     +             + + +    ++        +       G  +  + D  
Sbjct: 200 PGTPKGAAVDALGCPLDSDADGVFDGLDRCPSTPPGATVDAAGCPSDRDGDGVPDARDKC 259

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +     +    P    +    + +     + +++                         
Sbjct: 260 PAEAGRGSADGCPPRAAREAEPEPEPPRPSMPRRM------------------------- 294

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
                   +   F+  S    P++I +L      L    E  + + GHTD++     A  
Sbjct: 295 ------TLDGVSFEPGSVRLTPDSITILDNAAASLNAWGEVRVEVAGHTDSTH---SAAF 345

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           N  LS  RA +    L+K GV  +R++   G+   +    +      + NRR++++
Sbjct: 346 NLELSQRRAEAVRAYLVKKGVRAERLTA-RGYGESQPVADNRTAAGRAQNRRVELV 400


>gi|312891209|ref|ZP_07750731.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311296376|gb|EFQ73523.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 267

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 10/197 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            EK   L        S   + +  L              ++  +    +   L   +   
Sbjct: 65  DEKYNGLNSRYTASSSKVSQLSTDLQKREARLKEVEDILRKRDEATNALKEKLQKALLGF 124

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269
              G+  +     + +S+ D+    +F   S +   +    L+++  VL    ++   + 
Sbjct: 125 QQSGLTVDIRNGKVYVSLADKL---LFPSGSIVIDEKGKSALKQLAAVLNKEPDIYIAVE 181

Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326
           GHTD          +DNW LS+ RA S  + L +   V   R++  +G    +    +  
Sbjct: 182 GHTDDKKVINLGQIKDNWDLSVLRATSVTRYLTETEKVDPVRLTA-TGKGQFQPIDPAGT 240

Query: 327 --MNSANRRIDILVEDR 341
               + NRRI+I++  R
Sbjct: 241 PEARAKNRRIEIVLSPR 257


>gi|271500049|ref|YP_003333074.1| OmpA/MotB domain-containing protein [Dickeya dadantii Ech586]
 gi|270343604|gb|ACZ76369.1| OmpA/MotB domain protein [Dickeya dadantii Ech586]
          Length = 376

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 4/216 (1%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L+   +       +   S        +       +  +         + +     + 
Sbjct: 50  PSQLAQIAEYFRTPLKIAITSGPKISDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109

Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +L  L +++   +        +   +L E    G+ I IID  N PMF   S+   P   
Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  +L      IS+ GHTD + +        NW LS DRA ++ + L+  G+++ 
Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADG 229

Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342
           ++ ++ G A       +    ++ NRRI ++V ++Q
Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 50/107 (46%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T+   I D  NP      +      D     +++D ++  
Sbjct: 62  TPLKIAITSGPKISDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108


>gi|149277137|ref|ZP_01883279.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
 gi|149232014|gb|EDM37391.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
          Length = 280

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           K      S   + +  L    +      +  ++  +   ++   L   +      G+  E
Sbjct: 86  KLRSNSSSEINKLSQDLKKREQRLKEVEEILRKRDEATNQLKEKLQQALLGFTKSGLTVE 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF 277
                + +S+ D+    +F   S +   +    L ++  VL    E+   + GHTD+   
Sbjct: 146 IKNGKVYVSMTDKL---LFPSGSIVIDEKGKQALTQLATVLKQQPEINIAVEGHTDSQKI 202

Query: 278 R--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332
                 +DNW LS+ R+ S  + L + + V   R++  +G    +  ++  +    S NR
Sbjct: 203 TNLGQIKDNWDLSVLRSTSVVRYLTEVNKVESVRMTA-TGKGEFQPLVSNANAEGRSKNR 261

Query: 333 RIDILVEDR 341
           RI+I++  +
Sbjct: 262 RIEIVLSPK 270


>gi|309797860|ref|ZP_07692242.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|308118544|gb|EFO55806.1| OmpA family protein [Escherichia coli MS 145-7]
          Length = 211

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 87/172 (50%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E          +  A+ +KK   +L +  +S  +     ++   +  E    G+ + I 
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIK 63

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW LS 
Sbjct: 64  DDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSG 123

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           DRA SA +VL ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 124 DRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175


>gi|260557560|ref|ZP_05829775.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
 gi|260409186|gb|EEX02489.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
          Length = 471

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 82/255 (32%), Gaps = 8/255 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +  ++ + ++    I +     ++  ++       +   ++ +  Y +     +     L
Sbjct: 219 STDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSATKDCDVDTSQTYAAAFTDKDALAGVL 278

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                      +    + ++   +   L  L+ +    +   + +    +    ++S  +
Sbjct: 279 GALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVASAPETAEQSVSNSL 338

Query: 208 ADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           + +       +     +   +         F   SS    +   +L +   +L   + V 
Sbjct: 339 SASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNKAILDQAATLLNKVSGVK 398

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
             + GHTD++     A  N  LS  RA +    L+  GV   ++    G    +    + 
Sbjct: 399 LDVGGHTDST---GNAAANKALSQRRAQAVVDYLVSKGVDASKLVA-KGHGSEQPVADNT 454

Query: 326 PMNSA--NRRIDILV 338
                  NRRI+  V
Sbjct: 455 TEEGRFKNRRIEFSV 469


>gi|229096214|ref|ZP_04227187.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
 gi|229102326|ref|ZP_04233035.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
 gi|229115169|ref|ZP_04244579.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
 gi|228668309|gb|EEL23741.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
 gi|228681227|gb|EEL35395.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
 gi|228687174|gb|EEL41079.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
          Length = 213

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 11/218 (5%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L  +        S     +  K L K +D E+   K     +P ++ EK    
Sbjct: 3   TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDAEQVDAKVMENTIPDITHEKNDEK 62

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
              K+      ++   L   V +N +  V      TG+ + I+D     +FD   +   P
Sbjct: 63  MISKK---RMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVKP 116

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGV 304
           E   ++ ++          I + GHTD+ P  N     NW LS  RA +    L++   V
Sbjct: 117 EAKEIMSQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNV 176

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 177 DDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213


>gi|94970975|ref|YP_593023.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553025|gb|ABF42949.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 407

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 82/288 (28%), Gaps = 14/288 (4%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
           W   + DD    A    F      +      +   +                 ++T    
Sbjct: 122 WANASVDDG---ASPMRFTMDLIEVTPPPISMTLHEPAQTPEKMPTGGKGDFPYLTPMPG 178

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
            +  G   +   ++                  +N    D  +   +    D       + 
Sbjct: 179 SVAHGGQEEDTPFRLTPKGASQDEIVANGSVLRNYSLNDGSQILFVAVYHDALLKAGWDI 238

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P          K  + L           S  V          +  ++ ++      
Sbjct: 239 EQETPNAEVIVAHYGKHGRNLWAYLIDHGEEYSFRVGKEAAP----DQMKSKLIADCHVA 294

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + +   PE+   L ++G +L  ++   + ++GHTD          N  LS  
Sbjct: 295 IYGVLFDFNKATLQPESDGPLGQVGALLTANSSLNVEVQGHTDNV---GTDAYNQTLSEA 351

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA S    L + GV+  R++   G+        +   +    NRR++I
Sbjct: 352 RAKSVMTWLTQHGVAPGRMTA-KGYGKTMPVADNKTDDGRMKNRRVEI 398


>gi|300114861|ref|YP_003761436.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299540798|gb|ADJ29115.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
          Length = 249

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D  +++ + L+     + ++    +     +     D  +   FD  S    P  +  
Sbjct: 87  MNDQQREMEAALAEERRRHQLEIQRLQDESLKL-----DIPSEVSFDHDSDALKPAFLPT 141

Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L KI +VL      V+ + GHTD++      + N  LSL RA +    L + G+   R+ 
Sbjct: 142 LDKIADVLKKYNKTVVHVIGHTDST---GAEKYNLDLSLRRAGNVALYLERQGIPSQRL- 197

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            I G   +  + ++   +    NRR++I+++
Sbjct: 198 SIYGRGENEPRASNATASGRQLNRRVEIILK 228


>gi|238793598|ref|ZP_04637221.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
           29909]
 gi|238727013|gb|EEQ18544.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
           29909]
          Length = 255

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 4/230 (1%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           + + S  ++++     N     S          S +   +    +      +++ +    
Sbjct: 3   VGVVSEEERQEIVAQLNGQTIFSQQSFISIPSKSKSGGGKFSDSIDGKEQAKETKSNLAV 62

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    + +  K +K +++L++ I    S     +    +  E    G+ I I D +
Sbjct: 63  EVPEPEQSLEEVVDKSRKEMEELSRIIMQITSAY---DAQSNLQMEVVPQGLRILIQDDK 119

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291
              MF +SS++  P    +L ++          I I GHTDAS +R+    +NW LS +R
Sbjct: 120 QRDMFQRSSAVLTPFFNRLLAELAPAFNEMDNKIIITGHTDASRYRDQVLYNNWNLSGER 179

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A  A++ L+K G+SE R+ +I+  A   L   ++P+ + NRRI+I+V  +
Sbjct: 180 ALMAHKALVKGGLSEGRVLQINAMADQMLLDPAEPLAAKNRRIEIMVLTK 229


>gi|331016979|gb|EGH97035.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 295

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFFSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   G++  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  I +    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|251789151|ref|YP_003003872.1| flagellar motor protein MotB [Dickeya zeae Ech1591]
 gi|247537772|gb|ACT06393.1| OmpA/MotB domain protein [Dickeya zeae Ech1591]
          Length = 376

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 4/216 (1%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L+   +       +   S        +       +  +         + +     + 
Sbjct: 50  PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109

Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +L  L +++   +        +   +L E    G+ I IID  N PMF   S+   P   
Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  +L      IS+ GHTD + +        NW LS DRA ++ + L+  G+++ 
Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADG 229

Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342
           ++ ++ G A       +    ++ NRRI ++V ++Q
Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265



 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 50/107 (46%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T+   + D  NP      +      D     +++D ++  
Sbjct: 62  TPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108


>gi|237747593|ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
 gi|229378955|gb|EEO29046.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
          Length = 207

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   SI  PE    L ++ + L+     + +  GHTD        + N +LS  RA
Sbjct: 96  DAFFDFDKSIVKPEGKAKLDELIKALSGMDTEVIVAVGHTDWI---GTDKYNQKLSERRA 152

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            +    L+  GV  ++I    G    +   ++      + NRR+++ V   +G
Sbjct: 153 NAVKAYLVSKGVPANKIFT-EGKGKKQPIASNKTREGRAKNRRVEVEVVANRG 204


>gi|331011090|gb|EGH91146.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 295

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      ++     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    +IP  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++ A +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRPAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDS 151
                +  + ++  + 
Sbjct: 112 FGDLIKSDQMTVRGNE 127


>gi|325498393|gb|EGC96252.1| hypothetical protein ECD227_2490 [Escherichia fergusonii ECD227]
          Length = 256

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPTHPLKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA  +++   +NW LS DRA SA +VL  +G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P +S NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSSGNRRIEIMVLTK 220


>gi|92115424|ref|YP_575352.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91798514|gb|ABE60653.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 226

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 10/171 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +       +  I A         +   + +    L  D    G+  +     I++++   
Sbjct: 57  DGSTSRRDRALIGAAAGAAIGGGVGAYMDAQEEKLRRDLDGTGIGVDRQGDNIVLNM--- 113

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD  SS         L     V+       I++ G+TD++     A  N RLS  
Sbjct: 114 PSSVTFDVDSSALKTPARQALNDATAVMREYPKTRINVAGYTDST---GSADYNQRLSER 170

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA +    L + G++ +RI+ + G+   +   ++D     + NRR++I + 
Sbjct: 171 RAQAVADYLGQGGIAANRINTV-GYGERQPVASNDTESGRAQNRRVEITLT 220


>gi|315225274|ref|ZP_07867091.1| OmpA domain protein [Capnocytophaga ochracea F0287]
 gi|314944957|gb|EFS96989.1| OmpA domain protein [Capnocytophaga ochracea F0287]
          Length = 360

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278
               ++  I     T +FD   S+  P+   +L  I  ++  + +   +  GHTD +   
Sbjct: 238 RTQRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT--- 294

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N +LS DRA +  Q L + GVS+ R+    G+   R   +++       NRR++I
Sbjct: 295 GTPEHNLKLSQDRADAIKQYLSRHGVSKKRLDA-KGYGQTRPIESNETERGKEINRRVEI 353

Query: 337 -LVEDRQ 342
            +V+D Q
Sbjct: 354 NVVKDNQ 360


>gi|323498433|ref|ZP_08103429.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
 gi|323316506|gb|EGA69521.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
          Length = 322

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   PE+  +L ++   +    +  + + G+TD       A  N +LS  R
Sbjct: 210 DSGSFALNSTELKPESKQILNELVVFMNEYPQANVEVVGYTDT---SGAAAYNQKLSEKR 266

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S    L   G+   RI  + G   +    +++       NRR++I V
Sbjct: 267 AQSVSDALQAEGIDASRI-TVRGEGENNPIASNETKEGRVQNRRVEITV 314


>gi|257484887|ref|ZP_05638928.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 295

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      ++     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    +IP  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++ A +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDS 151
                +  + ++  + 
Sbjct: 112 FGDLIKSDQMTVRGNE 127


>gi|262279684|ref|ZP_06057469.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
 gi|262260035|gb|EEY78768.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
          Length = 473

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 81/271 (29%), Gaps = 17/271 (6%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P    L T  KG   +             L  +     ++       T+Q       + +
Sbjct: 215 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTNVKKVFSTTQDCNVDTSQTYAASFTDKD 274

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                          SL    +K           +++  +    +P         +  ++
Sbjct: 275 ALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVAAAPVTAEQ 334

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + +      + L+ +  +N+    L +     I+           F   SS    +   
Sbjct: 335 SVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN----------FASGSSEIPADNKA 384

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L +   +L   + V  ++ GHTD++     A  N  LS  RA +    L   GV   ++
Sbjct: 385 ILDQAVTLLNKVSGVKLNVGGHTDST---GNAASNKALSQRRAQAVVDYLTSKGVDASKL 441

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               G    +    +        NRRI+  V
Sbjct: 442 VA-QGHGSDQPVAENTTDEGRFKNRRIEFSV 471


>gi|300722595|ref|YP_003711885.1| flagella protein [Xenorhabdus nematophila ATCC 19061]
 gi|297629102|emb|CBJ89687.1| enables flagellar motor rotation, linking torque machinery to cell
           wall [Xenorhabdus nematophila ATCC 19061]
          Length = 333

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 10/206 (4%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202
              +  +         +       +  +         +++ A +  +RL  L +++    
Sbjct: 65  PLQVAINKGHQSSDSTNPIPGGGDDVFQQDGEIFRQTKEVEASEENRRLNRLHQQLDQLI 124

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++      +   +L +    G+ I IID+ N PMF   S+        +LQ I  +L   
Sbjct: 125 ITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMSDILQAIAPILNDI 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-- 318
              IS+ GHTD+  + N      NW LS DRA ++ + L+  G+ E +I ++ G A    
Sbjct: 185 PNKISLSGHTDSLKYANGQRGYSNWELSSDRANASRRELLVGGLDEVKILRVVGMASTVS 244

Query: 319 --RLKIASDPMNSANRRIDILVEDRQ 342
             +    + P+   NRRI I+V +++
Sbjct: 245 MQKGIDPNAPV---NRRISIIVLNKE 267



 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 2/179 (1%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           + N+  +I  KK    +   + GSWKI YADFMT +MAFFLVMW+I+        +I +Y
Sbjct: 2   RANNVSVIRVKKRKKHNPSQHGGSWKIAYADFMTAMMAFFLVMWLISIASPQELTSIAEY 61

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    +  +       D  NP      +      D  I + + +++    N++      +
Sbjct: 62  FRTPLQVAINKGHQSSDSTNPIPGGGDDV--FQQDGEIFRQTKEVEASEENRRLNRLHQQ 119

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +   +++ +  E   + L    ++G  +       + +    +  +     + + A+ 
Sbjct: 120 LDQLIITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMSDILQAIA 178


>gi|327397929|gb|AEA73286.1| MopB [Stenotrophomonas maltophilia]
          Length = 363

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L D    +++           + +  +     + I +        FD   S   P+ +
Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVN----FDFDKSNLRPDAV 266

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +  E+L    +  + + GHTD+   +     N +LS  RA + Y  L K+GV   R
Sbjct: 267 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 323

Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
           +    G+   R    +            + NRR ++ V++
Sbjct: 324 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 363


>gi|162452747|ref|YP_001615114.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161163329|emb|CAN94634.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 386

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 12/278 (4%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +   +   P           +  +       ++       D+    +      G T+ K 
Sbjct: 112 RGFVEEAPPPKPGDCDGDGLLDPQDKKCPCDAETWNGFQDDDGCPDDPDTDGDGLTDSKD 171

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
               L  +     +        N L    +         +        + Y       E 
Sbjct: 172 SCVLLPEDKDGYLDEDGCPELDNDLDTILDANDKDSTGKNCANDPEDPDGYEDADGCPEP 231

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                    L+D        + G       K  L   T   I I+         F+    
Sbjct: 232 DNDQDTVVDLEDQCPNEPGVVGGDKPGCPKKPSLVIVTEKEIKITQQIH-----FEFDKD 286

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              PE+  +L  + +VL  + ++   I+GHTD    +  A  N +LS  RA S  + L+ 
Sbjct: 287 KIRPESFPILDAVVDVLQQNPKIKIEIQGHTDN---KGAAAYNKKLSDRRAASVKKYLVA 343

Query: 302 SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            G+ E R++   G+   +  + +  D   + NRR+  +
Sbjct: 344 KGIDEARLTS-KGYGMEQPIVPNTSDQNRALNRRVQFV 380


>gi|585710|sp|P37726|PORF_PSEFL RecName: Full=Outer membrane porin F; AltName: Full=Root adhesin;
           Flags: Precursor
 gi|5668610|gb|AAD45981.1| OprF [Pseudomonas fluorescens]
          Length = 326

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 9/283 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D +  + I  ++  L       + 
Sbjct: 45  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGSQKIGGDTSSLTAQYHFGQA 104

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD               + N      +     
Sbjct: 105 GVDSLRPYVEGGFGHQSRGNVKADGHSGRDQSTLAIAGAGVKYYFTNNVYARAGVEADYA 164

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+  P +   ++ + + +A      + + GHTD+         N +LS  RA    QVL
Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSI---GPDAYNQKLSQRRADRVKQVL 281

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +K GV+  RI+ + G+   R    +        NRR++  VE 
Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323


>gi|330880603|gb|EGH14752.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 262

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 24  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 83

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    +IP  +   +++K+  ++      I + G
Sbjct: 84  KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 140

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 141 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 199

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 200 RAKNRRVVLVISR 212


>gi|255530239|ref|YP_003090611.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343223|gb|ACU02549.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 280

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE   +  K      +   + +  L    +      +  ++  +   K+   L   +   
Sbjct: 78  SEMDNNYSKLRSNSSTEINKLSADLKKREQRLKEVEEILRKRDEATNKLKEKLQQALLGF 137

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269
              G+  E     + +S+ D+    +F   S I   +    L ++ +VL    E+   + 
Sbjct: 138 TQSGLTVEIKNGKVYVSLTDKL---LFPSGSIIIDEKGKQALTQLADVLKQQPEINIAVE 194

Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326
           GHTD+         +DNW LS+ R+ S  + L +   V   R++  +G    +    +  
Sbjct: 195 GHTDSQKITNLGQIKDNWDLSVLRSTSVVRFLTEICKVQPVRMTA-TGKGEFQPLGPNTS 253

Query: 327 MNSA--NRRIDILVEDR 341
             S   NRRI+I++  +
Sbjct: 254 AESRSKNRRIEIVLSPK 270


>gi|237799262|ref|ZP_04587723.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806231|ref|ZP_04592935.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022118|gb|EGI02175.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027345|gb|EGI07400.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 296

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSTKPAEPLLKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +    ++ +F    ++P  +   +++K+ +++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSDIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
            TD  P R      NW LS  R+ S  ++L   GV+  R++ + G+   +   ++     
Sbjct: 174 FTDDQPIRTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPVASNATAAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +    +   N   W + YADF+T+L AFF+VM+ I++ ++   K + Q       +    
Sbjct: 3   RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSQALVGVFNDTERT 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            K I   +  P   S    +  + E    ++   +      +   Q + +    L  S Q
Sbjct: 63  MKPIPIGEQRP--VSTKPAEPLLKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120


>gi|296328184|ref|ZP_06870715.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154696|gb|EFG95482.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 394

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 10/272 (3%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             +     +    DE    +R+       +         VD +       ++ +      
Sbjct: 125 TVQTDGKGAGQYTDENVTIQRNEDGSGQYTNKITGVTLQVDAQGEGQYLDEKNKISFQIG 184

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   + E+   ++T           +  +E + +    Y             K K  
Sbjct: 185 ADGTGVYKDENNDTTITIGENNSTYTKGNITIENNGDGSGTYNDKDKELLIENDGKGKAI 244

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETI 249
           +    K I      L        +        I  +  +I   +  +FD       PE  
Sbjct: 245 ITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAE 304

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL+ +  VL  +  +   I GHTD+         N  LS +RA +    L   G+  + 
Sbjct: 305 EVLKNLVIVLKEADIKAFEIDGHTDSD---ASDEHNQVLSENRANAVKNFLTSQGIMAE- 360

Query: 309 ISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
              I G+   R   ++D       NRR++I++
Sbjct: 361 -ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 391


>gi|95930659|ref|ZP_01313393.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95133311|gb|EAT14976.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 303

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 112/300 (37%), Gaps = 22/300 (7%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
            F ++         T +           +L   ++ + + Q              I E  
Sbjct: 12  LFALLSTSGCVSKATYQQQLDQNQTLQTDLYGTTEKLNNLQ----------ARYDIVEQQ 61

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            ++++       +Q        + +  +  ++  +  +     + ++ +   +    ++ 
Sbjct: 62  LEDAMAQNRALNDQNIAAMAEIDRLKNIFQARSQQQQEQLSALEQQQQELEAQQEQQQQR 121

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +  +       + +   + R+ RL  +A   +S ++ L  +     +     +  + +
Sbjct: 122 YQQLLDNKQQLEQELERERIAREARLAKMANTYNSLVANLEQEIERGEITINKLKDKLTV 181

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR----NIA 281
           +++++    +F   S+   P  I V++++G++L    +  I + GHTD            
Sbjct: 182 NLVEK---ILFPSGSADLTPAGIKVIRQVGDILKEVDDKDIRVEGHTDNLGISKALQAKF 238

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             NW LS  RA +  +VL +  G+  +++ +I  +       ++D     + NRRI I++
Sbjct: 239 PSNWELSAARAANVVRVLQREVGIPGEKL-EIGAYGPFHPVSSNDTPEGRAQNRRIQIVL 297


>gi|194099378|ref|YP_002002478.1| hypothetical protein NGK_1853 [Neisseria gonorrhoeae NCCP11945]
 gi|239999626|ref|ZP_04719550.1| hypothetical protein Ngon3_09112 [Neisseria gonorrhoeae 35/02]
 gi|240014801|ref|ZP_04721714.1| hypothetical protein NgonD_09194 [Neisseria gonorrhoeae DGI18]
 gi|240017250|ref|ZP_04723790.1| hypothetical protein NgonFA_08817 [Neisseria gonorrhoeae FA6140]
 gi|240081113|ref|ZP_04725656.1| hypothetical protein NgonF_07349 [Neisseria gonorrhoeae FA19]
 gi|240113325|ref|ZP_04727815.1| hypothetical protein NgonM_07083 [Neisseria gonorrhoeae MS11]
 gi|240116327|ref|ZP_04730389.1| hypothetical protein NgonPID1_08846 [Neisseria gonorrhoeae PID18]
 gi|240118614|ref|ZP_04732676.1| hypothetical protein NgonPID_09178 [Neisseria gonorrhoeae PID1]
 gi|240121324|ref|ZP_04734286.1| hypothetical protein NgonPI_06069 [Neisseria gonorrhoeae PID24-1]
 gi|240124157|ref|ZP_04737113.1| hypothetical protein NgonP_09504 [Neisseria gonorrhoeae PID332]
 gi|240126226|ref|ZP_04739112.1| hypothetical protein NgonSK_08443 [Neisseria gonorrhoeae SK-92-679]
 gi|240128827|ref|ZP_04741488.1| hypothetical protein NgonS_09423 [Neisseria gonorrhoeae SK-93-1035]
 gi|293398468|ref|ZP_06642646.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
 gi|193934668|gb|ACF30492.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|291610939|gb|EFF40036.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
 gi|317164880|gb|ADV08421.1| hypothetical protein NGTW08_1460 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 225

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  +     I + + +      F   S+         L    +
Sbjct: 76  YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 189 SHMPVASNATVEGRAQNRRVEILINPDQ 216


>gi|300955691|ref|ZP_07168041.1| OmpA family protein [Escherichia coli MS 175-1]
 gi|2494512|sp|Q47154|MBHA_ECOLI RecName: Full=Putative protein mbhA
 gi|984586|dbj|BAA07592.1| MbhA [Escherichia coli W3110]
 gi|1552798|gb|AAB08650.1| MbhA [Escherichia coli]
 gi|300317442|gb|EFJ67226.1| OmpA family protein [Escherichia coli MS 175-1]
          Length = 211

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175


>gi|222056198|ref|YP_002538560.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221565487|gb|ACM21459.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 349

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 8/205 (3%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             E     +        D  +      +  +     L  +  + +   K++   ++    
Sbjct: 129 AQEEAAKKVPELQAAVADREERISNLNATLRSLKSNLIQIRTDVVQLAKKRSGSEEKENA 188

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            ++             +L       +++++ +Q    +F   S+         L+++  +
Sbjct: 189 YAAFRRDFSDQIGKGEILVTEYPDKLIVTMPEQ---VLFRSGSATINKGGKKALERVASI 245

Query: 259 LAHSTEVI-SIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           L         I GHTD++P ++      NW LS  RA S  + L K G        ++G+
Sbjct: 246 LKKVKNNRIRIEGHTDSTPIKSKHRYASNWDLSAARAASVVRHLQKKGAVNPEFLTLAGY 305

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
             +    A++       NRRI+I +
Sbjct: 306 GPYAPAAANNTSRGRSLNRRIEIAL 330


>gi|262170812|ref|ZP_06038490.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
 gi|261891888|gb|EEY37874.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
          Length = 322

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P     L K+   L    +  + + GHTD+         N +LS  R
Sbjct: 209 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSKAYNQKLSEKR 265

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   GV   RI+   G        ++        NRR+++++
Sbjct: 266 AQAVAKALEAQGVDAARITA-KGQGESNPIASNATAEGREKNRRVELVI 313


>gi|170700356|ref|ZP_02891367.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170134743|gb|EDT03060.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 228

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270
              +       GI I I  +    +F    +  LP+   VL +I   L+   T  I + G
Sbjct: 100 NGRISLVRASHGIEIGIDAK---ILFSVGDARLLPDATPVLSQIARALSEHATGDILVEG 156

Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327
           HTD+ P  N     NW LS  RA S  + L   GV+  R++ I G A  +  +A D  P 
Sbjct: 157 HTDSVPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQPLVAGDDAPA 215

Query: 328 NSANRRIDILV 338
            + NRR+ I V
Sbjct: 216 RARNRRVTIFV 226



 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
              G W I YAD +T LM  FL ++++ 
Sbjct: 24 GAQSGRWLISYADLITTLMVLFLALYVLQ 52


>gi|307131627|ref|YP_003883643.1| flagellar motor rotation protein motB [Dickeya dadantii 3937]
 gi|306529156|gb|ADM99086.1| Flagellar motor rotation protein motB [Dickeya dadantii 3937]
          Length = 376

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 4/216 (1%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L+   +       +   S        +       +  +         + +     + 
Sbjct: 50  PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109

Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +L  L +++   +        +   +L E    G+ I IID  N PMF   S+   P   
Sbjct: 110 KLNKLRERLDQLIEADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L+ I  +L      IS+ GHTD + +        NW LS DRA ++ + L+  G++E 
Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIIGGLAEG 229

Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342
           ++ ++ G A       +    ++ NRRI ++V ++Q
Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 50/107 (46%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
              K  +T+   + D  NP      +      D     +++D ++  
Sbjct: 62  TPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108


>gi|291286231|ref|YP_003503047.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290883391|gb|ADD67091.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 247

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISII 229
           E        ++ +  +   + ++ + +K++ +L   V    + + V    T+ G+ + I+
Sbjct: 61  EGNKTEMTQEDIMSRLSFVQNVRSVQRKVTKSLREYVKSAQMSQVVTIAETKKGVSVRIL 120

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLS 288
           D+    +F   S+  L +   +L K+  V+  S   I + GHTD  P        NW LS
Sbjct: 121 DKM---LFKSGSAEILDQGKPLLDKLAAVIEESPFNIMVEGHTDDIPISTALYPSNWELS 177

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             RA S  +  M   VS  R+S  SG+A +     +    S   NRR+++
Sbjct: 178 TARAVSVVKYFMSKDVSAQRLSA-SGYAEYHPVTPNISAASREKNRRVEV 226



 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K   ++       W   ++D  T+LM FF+++  + + D    K            L   
Sbjct: 3   KKKCEECKPGAPMWMSTFSDMATLLMTFFILLLSMASMDKRKIKVALGSLQGSLGVLKEG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +K    +++   R S  +   S+   +TK+
Sbjct: 63  NKTEMTQEDIMSRLSFVQNVRSVQRKVTKS 92


>gi|332664040|ref|YP_004446828.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332854|gb|AEE49955.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 651

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F+ +S+    E+   L  + ++L  +    I I GHTD         DN RLS  R
Sbjct: 546 RNVFFETASAALRQESGPELDHLADLLNQNPNLRIQINGHTDNV---GTDADNLRLSEQR 602

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A + Y  L+  G++ +R+    GF   +    ++       NRR + +V 
Sbjct: 603 AKAVYTYLVGKGIAAERL-AYKGFGETQPIADNNTEEGRKVNRRTEFVVL 651


>gi|258404712|ref|YP_003197454.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796939|gb|ACV67876.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 248

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 8/162 (4%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                  + LQ + + I + +  L  +   + +     R  +++ + D     +FD   +
Sbjct: 75  AQQNNLNESLQRVYQNIKNRIDNLEVN---ENIKLVKDRGAVVLRLNDSL---LFDSGET 128

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              P    +L+++ +++      + + GHTD  P       NW +S++RA S  + L   
Sbjct: 129 ALKPRAAPLLREVAQLVRPLHLDMRVEGHTDNVPVSRPGISNWDISIERAVSVVKFLTSR 188

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +        +G+   R  + +D     + NRR+D  +E  +
Sbjct: 189 DLLPPSRLSAAGYGDQRPLVRNDSPENRAKNRRVDFYLEQDE 230


>gi|110638407|ref|YP_678616.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281088|gb|ABG59274.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 509

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 7/142 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            S +  L      + +  +     + ++   + N   FD  S+    E+ + L ++ E++
Sbjct: 369 QSEVYDLEKAVAYETIKKDMVLEPLKLNASFRLNNLFFDFDSASLTKESELELDRVIEMM 428

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +  +   I  HTD          N +LS  RA S  + L   G+   R+    G+   
Sbjct: 429 KTNATMQVEISAHTDDM---GSDAYNQKLSQLRAESVVKYLTLHGIITTRLVA-KGYGES 484

Query: 319 RLKIASDPM--NSANRRIDILV 338
              + +D     + NRR++  +
Sbjct: 485 VPSVPNDTEENRAKNRRVEFKI 506


>gi|4580969|gb|AAD24556.1|AF117964_1 OprF [Pseudomonas fuscovaginae]
          Length = 326

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + ++  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 221 FDFNKAVVKPNSYGDVKNLADFMKQYPQTTTVVSGHTDSV---GTDAYNQKLSQRRADAV 277

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            QVL+K G++ +RI  +  +   R    +        NRR++  VE 
Sbjct: 278 KQVLVKDGIAPNRIQSVV-YGKTRPVADNATEAGRAINRRVEASVEA 323


>gi|15836945|ref|NP_297633.1| outer membrane protein [Xylella fastidiosa 9a5c]
 gi|9105169|gb|AAF83153.1|AE003886_12 outer membrane protein [Xylella fastidiosa 9a5c]
          Length = 389

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   S   P+ + VL++  E+L    +  + + GHTD++     A  N
Sbjct: 275 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 331

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +LS  RA   Y  L  +G+   R+    G+        +      + NRR ++ V++
Sbjct: 332 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 389


>gi|311695446|gb|ADP98319.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 218

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I + +        FD + S   P     L+ +  
Sbjct: 78  YMDKQEAELRRKLEGTGVRVVRNGDEIELVM---PGNITFDLNESSIKPSFSGTLESVAL 134

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      +I I GHTD+         N  LS  RA S    L+  G+   R ++  G+ 
Sbjct: 135 VLKEYDKTIIQIEGHTDS---SGSDSYNQLLSERRASSVRDFLLNQGIEPKR-TRAVGYG 190

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                 ++D       NRR+++ +
Sbjct: 191 ERYPVASNDTAAGREQNRRVELTL 214


>gi|257126222|ref|YP_003164336.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257050161|gb|ACV39345.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 225

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 6/156 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETI 249
           ++++   +I++       DN V             I  I+       FD   S   P   
Sbjct: 35  QMRENTIRINALEIEEPGDNTVPAKKITCEDIMGPIQPIVFDEGALNFDFDKSYVKPYYN 94

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  + E L      + I GHTD+   +     N  L + RA +    L++ G+S  RI
Sbjct: 95  GLLGILKEFLNEKDYNVGITGHTDS---KGSDAYNMALGMRRAKAVKDRLIELGLSSSRI 151

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
             I           ++     + NRRI+  V +R G
Sbjct: 152 RGIDSKGESEPIATNETDEGRAQNRRIEFDVRNRDG 187


>gi|254302309|ref|ZP_04969667.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322501|gb|EDK87751.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 189

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 5/155 (3%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L  L        S  +    +K +    +     ++I+       FD   S   PE  
Sbjct: 23  PALAALTTTQMRENSIRINALELKNIDILNSEAPKEMTIVLDERALNFDFDKSNVKPEYY 82

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L+ I E +  +   I+I GHTD+         N++LS  RA S    L++ G++EDRI
Sbjct: 83  DLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLTEDRI 139

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             I      +    ++     + NRR++  +  R+
Sbjct: 140 VGIEAMGEEQPIATNETKEGRAQNRRVEFKLVQRE 174


>gi|188590401|ref|YP_001920214.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
 gi|251779316|ref|ZP_04822236.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|188500682|gb|ACD53818.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
 gi|243083631|gb|EES49521.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 247

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 73/174 (41%), Gaps = 6/174 (3%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +  +P +  E  +      +            + +  +N+   +       G+++ + D 
Sbjct: 73  DGKVPVIGGESDVDGVIDAQSLGKENMYKDIKNYVEKNNLSGSMDIIQDERGVILELKDS 132

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLD 290
               +F+   +  +P +  VL K+  +++     + + GHTD  P  N     NW LS  
Sbjct: 133 ---VLFESGQADLIPGSKEVLDKVDTLVSALPNSVIVEGHTDNVPISNYRYASNWELSTQ 189

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA +  +  +++  ++      +G+  +R  + ++     + NRR++IL+ + +
Sbjct: 190 RAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENRAKNRRVNILIINEK 243



 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + ++K + D        W   Y+D +T+L+ FF++++ +++ D +  K+I + F      
Sbjct: 1   MARRKKSDDGGGLKGDEWLGTYSDCVTLLLTFFILLYSMSSVDAEKLKSISEAFVSVMTG 60

Query: 76  LMTASKGIFDE--QNPPERSSQNKIDLSIDEHI 106
             + S   F+      P    ++ +D  ID   
Sbjct: 61  QSSDSFMEFNMYDGKVPVIGGESDVDGVIDAQS 93


>gi|332978756|gb|EGK15448.1| outer membrane porin OprF [Psychrobacter sp. 1501(2011)]
          Length = 304

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 15/279 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           + P     +         +          +D          +++     +     +  + 
Sbjct: 35  WYPNKVVDVDTILNTPTPEGTTRLVFYRPMDEDDSRTGVNIAINDDYQVSLHPGSFTTVY 94

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + I     S +S     +      K   L         IN  +N         +  A   
Sbjct: 95  SCIGDNRLSNRSSELNTNDLLLKHKTSTLKDQETQYYEINVNKNRVAKSKRVSEDQARAA 154

Query: 189 KKRLQDLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
              +   + +IS  +           + +        + I++       +FD   S+  P
Sbjct: 155 MAGMTYQSHQISKVIPNCAPRPQPKPQPISVPVLEEKVTINLQ-----VLFDNDKSVVKP 209

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
           + +  L    E +   ++   +  GHTD+         N  LS  RA++  +V +   G+
Sbjct: 210 QYLRDLSTAAEFMQKYSDTTVVIEGHTDS---NASDAYNIALSKRRAHAVKEVFVNQYGI 266

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           S  RI  + G+   R   ++        NRR+  +++ +
Sbjct: 267 SPARIQAV-GYGESRPIASNATAEGRQMNRRVVAVIQQK 304


>gi|163787137|ref|ZP_02181584.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
           ALC-1]
 gi|159877025|gb|EDP71082.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
           ALC-1]
          Length = 319

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 17/217 (7%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL-- 195
              E+   S+  +S+K ++L    + ++     E+  L  L KE     KR   L+++  
Sbjct: 96  ALEENSSASIAANSKKNRELLAQLEAKEQALATESERLNTLKKELESRSKRVAELENVIA 155

Query: 196 -----AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
                 + +   +S  + +   KG+  E     + +S+    N  +F   S     E   
Sbjct: 156 AKDANMRALKDAISKALTNFEGKGLTVEQRDGKVYVSM---ENKLLFQSGSWSVGTEGRK 212

Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSE 306
            +Q++G VLA + E+   I GHTD  P++  A    NW LS  RA +   +L ++  +S 
Sbjct: 213 AVQQLGSVLAENPEISVLIEGHTDNVPYKGNAQLSGNWDLSAKRATAIVNILRENSAISP 272

Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           + ++   G         +      + NRRI++++  +
Sbjct: 273 ENLTAA-GRGEFAPIATNSTAEGKAKNRRIEVVLTPK 308


>gi|325982116|ref|YP_004294518.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325531635|gb|ADZ26356.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 237

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 7/162 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIP 244
           +      L +K+  T+S           + +T     +I    I+   +   F     I 
Sbjct: 75  QDDEHTILTEKVEKTISQDENPPAATEEIIDTVPPLDVIDRPRILAIFDGKTFRSGQDII 134

Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              +  V+  + + ++ S      I GHTD  P   I+ DN  LS  RA +   VL+  G
Sbjct: 135 HDVSHSVIDNLIKEISASPNSRILIEGHTDNIPTGKISSDNMDLSRRRARAIANVLILHG 194

Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQG 343
           V   RI  I G+   R  +++  D   + NRR+++ +   +G
Sbjct: 195 VPATRI-SIIGYGDKRPIVSNATDEGRAKNRRVEVKLMPPEG 235


>gi|114707989|ref|ZP_01440881.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
 gi|114536618|gb|EAU39750.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
          Length = 221

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +  + L       GV        I++++        F    S  LP     L  +  
Sbjct: 79  YMDNQEAQLRQQLQGTGVSVTRVGDRIILNMPSNVT---FPSDQSQILPGFYPTLDSVAI 135

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    E I ++ GHTD+         N  LS  RA S  Q L   GV+ +R++   G+ 
Sbjct: 136 VLQKFDETIVNVYGHTDSQ---GGDGYNLSLSQQRASSVSQFLASRGVNPNRLNT-QGYG 191

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
             +    +      + NRR+++ +
Sbjct: 192 ESQPIADNSTEAGRARNRRVEVQI 215


>gi|256822902|ref|YP_003146865.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
 gi|256796441|gb|ACV27097.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
          Length = 221

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 10/195 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            E+            +I              +  A+        +   + S    L  + 
Sbjct: 32  GEEQTSKTVKYGAIGAITCGLIGATRDSKSARNAALGCGAIGAGIGAYMDSQEKELREEL 91

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
              GV  +     I + +        F             VL  + +VL    +    + 
Sbjct: 92  AGTGVGVQRDGEQIHLIMPGDIT---FQTDRYAIDSGFYPVLDSVSKVLYKFKDTNLEVA 148

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G TD+         N  LS  RA S    L +  +  +R+ ++ G+        ++    
Sbjct: 149 GFTDSV---GSDSYNQELSEKRANSVASYLRQREIPNNRL-RVVGYGERYPVAPNETEAG 204

Query: 330 A--NRRIDILVEDRQ 342
              NRR+++ +    
Sbjct: 205 RSKNRRVELTITPDP 219


>gi|310764847|gb|ADP09797.1| chemotaxis protein (motility protein B) [Erwinia sp. Ejp617]
          Length = 302

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 77/202 (38%), Gaps = 3/202 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                     K                 +   +     +K+   K  + L+ +  ++ + 
Sbjct: 64  PIKPTMGQGNKTSFSESVIPGGGDDVIRQEGEVFKHQVDKLDKFKNVESLKKVKTRLEAM 123

Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +       N    +L   T  G++I I D +  PMF   S  P      +LQ +  +L  
Sbjct: 124 IESDPRLSNFKSNLLLTLTDDGLVIQITDSQERPMFKTGSESPESYMKGILQALVPLLKE 183

Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +S+ GHTD+  +   +    NW LS  RA +A +VL+ +G+ +D I ++ G     
Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLVNAGLDDDHILRVIGTGSRM 243

Query: 320 LKIASDPMNSANRRIDILVEDR 341
                   N  NRRI +L+  +
Sbjct: 244 GLTDISADNPMNRRISVLILSK 265



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II ++K       ++ G+WKI YADFMT +MAFFLVMW++ ++ D  ++ I  YF    
Sbjct: 6   PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           K  M         ++       + I    +
Sbjct: 66  KPTMGQGNKTSFSESVIPGGGDDVIRQEGE 95


>gi|262042941|ref|ZP_06016085.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039658|gb|EEW40785.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 568

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280
             +  ++I   +  +FD    +  P +   L      +       I + GHTD+      
Sbjct: 424 QRVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GE 480

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            + N  LSL RA S    +  +G   D    + G+   R    +      + NRR++I +
Sbjct: 481 EKANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNGTPEGRALNRRVEISL 540


>gi|19704459|ref|NP_604021.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714725|gb|AAL95320.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 315

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 10/272 (3%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             +     +    DE    +R+       +         VD +       ++ +      
Sbjct: 46  TVQTDGKGAGQYTDENITIQRNEDGSGQYTNKVTGVTLQVDTQGEGQYLDEKNKISFQIG 105

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   + E+   ++T           +  +E + +    Y             K K  
Sbjct: 106 ADGTGVYKDENNDTTITIGENNSTYTKGNITIENNGDGSGTYNDKEKELLIENDGKGKAI 165

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETI 249
           +    K I      L        +        I  +  +I   +  +FD       PE  
Sbjct: 166 ITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAE 225

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL+ +  VL  +  +   I GHTD+         N  LS +RA +    L   G+  + 
Sbjct: 226 EVLKNLVIVLKEADIKAFEIDGHTDSD---ASDEHNQVLSENRANAVKNFLTSQGIMAE- 281

Query: 309 ISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
              I G+   R   ++D       NRR++I++
Sbjct: 282 -ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 312


>gi|237740687|ref|ZP_04571168.1| outer membrane protein [Fusobacterium sp. 2_1_31]
 gi|229422704|gb|EEO37751.1| outer membrane protein [Fusobacterium sp. 2_1_31]
          Length = 212

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
               +    L A               +++++        F   S+         L  + 
Sbjct: 71  AYKDNQARELRAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L    E  I + G+TD++        N  LS  RA S  Q L+  GVS  RI   +GF
Sbjct: 128 QTLVRYPETRIQVNGYTDST---GGDAHNQELSQRRANSVAQYLISQGVSSSRIVA-NGF 183

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  ++        NRR+++ +   Q
Sbjct: 184 GSSNPIASNATPEGRQANRRVEVRILPAQ 212


>gi|254487455|ref|ZP_05100660.1| OmpA family domain protein [Roseobacter sp. GAI101]
 gi|214044324|gb|EEB84962.1| OmpA family domain protein [Roseobacter sp. GAI101]
          Length = 221

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                +   +   V+   T   +++++       +F   S+         L  +   +  
Sbjct: 85  QQEADLRRQLDSNVIITNTGDRLIVTLPQD---ILFATDSTTVQSGMQSDLAALARNVNV 141

Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +     + GHTD+      A  N +LS  RA +   VL+ +GV  +RI  + G    + 
Sbjct: 142 YSNSTLQVIGHTDSV---GDASYNQQLSEGRANAVANVLIGNGVPRNRIQAV-GRGESQP 197

Query: 321 KIA--SDPMNSANRRIDILVE 339
             +  +    + NRR++I++ 
Sbjct: 198 VASNLNASGKAQNRRVEIVIL 218


>gi|330953776|gb|EGH54036.1| flagellar motor protein MotD [Pseudomonas syringae Cit 7]
          Length = 295

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +       +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +    +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTSTVG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 10/236 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                +  + ++  +    +    S+ L  S +   +     + ++    +KR      +
Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLPETIV 250
                              +    + + + +  +D  N             P    
Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPN 227


>gi|229132541|ref|ZP_04261390.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
 gi|228650887|gb|EEL06873.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
          Length = 225

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N V  V      TG+ I I+D     +FD
Sbjct: 64  PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   V+ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +   ++D       NRR+ I +++
Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVESNDSPQNWEKNRRVVIYIKE 225


>gi|213963523|ref|ZP_03391776.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
 gi|213953803|gb|EEB65132.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
          Length = 229

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 7/142 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  +      FD +      ++   L K+  +L    
Sbjct: 80  QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINEKSKQTLDKLAAILKEYP 139

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    + GHTD+         N  LS  RA +        G++  R +    +       
Sbjct: 140 DTNVLVAGHTDSV---GKDEYNLGLSQRRAQAVTNYFKSKGLAGSRFTT-KWYGEKNPIA 195

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
           ++D     + NRR+++++   +
Sbjct: 196 SNDTAEGRAKNRRVNVVIVPNE 217


>gi|162449773|ref|YP_001612140.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161160355|emb|CAN91660.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 601

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 67/270 (24%), Gaps = 10/270 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T +KG          ++    D   D       V  +          +++          
Sbjct: 322 TGTKGARGAAPAAPPAADFDGDSVPDAEDACPRVIGEARPPAAAAGARQVFRRGCPPDRD 381

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
               +  +    D               + +            +                
Sbjct: 382 DDGIYDVDDRCPDVPGVSSAAADAGPGGAGSGITAETAANAGSQPASRHGCPADTDGDGI 441

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKI 255
             ++           +          + I            F    +   PE+  +L ++
Sbjct: 442 PNAADACPYERGKPSEDRATHGCPFAVRIEGSQIVILQQVQFRTGRAEIEPESFELLSEV 501

Query: 256 GEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
             VL    E+  +   GHTD       A+ N  LS  RA +    L   G+   R+    
Sbjct: 502 AAVLEEHPEIARVAVDGHTDNQ---GAAQANLSLSQRRALAVVAWLTAHGIDARRLEA-R 557

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDR 341
           GF   R    +      + NRR++  +  R
Sbjct: 558 GFGARRPLADNRTRDGRAKNRRVEFQIRKR 587


>gi|59801892|ref|YP_208604.1| hypothetical protein NGO1559 [Neisseria gonorrhoeae FA 1090]
 gi|260439855|ref|ZP_05793671.1| hypothetical protein NgonDG_01984 [Neisseria gonorrhoeae DGI2]
 gi|291043130|ref|ZP_06568853.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|59718787|gb|AAW90192.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|291012736|gb|EFE04719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|307075938|emb|CBE70801.1| outer membrane protein A [Neisseria gonorrhoeae]
          Length = 225

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  +     I + + +      F   S+         L    +
Sbjct: 76  YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 189 SHMPVASNATVEGRAQNRRVEILINPDQ 216


>gi|28199584|ref|NP_779898.1| outer membrane protein [Xylella fastidiosa Temecula1]
 gi|28057699|gb|AAO29547.1| outer membrane protein [Xylella fastidiosa Temecula1]
          Length = 389

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   S   P+ + VL++  E+L    +  + + GHTD++     A  N
Sbjct: 275 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 331

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +LS  RA   Y  L  +G+   R+    G+        +      + NRR ++ V++
Sbjct: 332 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 389


>gi|302875899|ref|YP_003844532.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307689333|ref|ZP_07631779.1| chemotaxis MotB protein [Clostridium cellulovorans 743B]
 gi|302578756|gb|ADL52768.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
          Length = 245

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++ +L  K+   ++    +     V+ E  + G+ ISI D     +F+   +  L E   
Sbjct: 99  KMHELKAKLDQEIA---REGYSDKVITELNKDGLYISIQD---VILFNSGDANVLKEVSP 152

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308
           +L +I  ++      I I GHTD  P      R NW LS  RA +    ++ +G ++ ++
Sbjct: 153 LLTEISHLIRDIDNRIRIVGHTDNVPISTVKFRSNWDLSAMRAINVMNFMVDTGKLNPEK 212

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           +  I  +  +  +  +      + NRR++I +  
Sbjct: 213 V-SIQAYGEYMPRFDNSTAENRARNRRVEIFIIR 245



 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
          K       +   +W I YAD +T+L+A F+VM+ ++  D+     + Q  N    
Sbjct: 3  KKKQHHEEHVDETWLIPYADMLTLLLALFIVMFAMSKLDNQKVSQVSQQLNAIFA 57


>gi|78189119|ref|YP_379457.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
 gi|78171318|gb|ABB28414.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
          Length = 233

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D  V+G   +     I +      +  +F   SS     +   ++++  +L    
Sbjct: 86  QAAAIDQNVEGAQVQRVGESIRVVF---DSGLLFTTGSSTISAASRSNIEQLARILNTYG 142

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +   +  GHTD+         N  LS  RA S   +L   GV+ +R+S + G+   R   
Sbjct: 143 DTNVVIEGHTDSI---GNEATNQVLSEKRAESVATLLKVYGVAPNRMSAV-GYGETRPVA 198

Query: 323 ASDPMNSA--NRRIDILV 338
            ++       NRR+++L+
Sbjct: 199 TNETEAGRNLNRRVEVLI 216


>gi|328470939|gb|EGF41850.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
          Length = 329

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA +    +  +G+  DR+  + G         +        NRR++++V
Sbjct: 268 ERRAQAVADYITSAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318


>gi|118443271|ref|YP_877986.1| chemotaxis motB protein [Clostridium novyi NT]
 gi|118133727|gb|ABK60771.1| chemotaxis motB protein [Clostridium novyi NT]
          Length = 241

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 8/163 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                 K   D  +  S        +N+   V  +    GI++ + +     +FD   + 
Sbjct: 80  PEEMGSKVANDNEEMYSKVKDFTSKNNLDSTVQVKKDARGIILELKEN---ILFDSGQAD 136

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MK 301
               +  +L KI  ++      I I GHTD  P  N     NW LS  RA +  +   + 
Sbjct: 137 LKLSSKEILDKISALIESVPNGIIIEGHTDNVPIHNSKYDSNWELSTQRAVNVLKYFVVS 196

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            G   ++     G+  +     +D     + NRR++IL+   +
Sbjct: 197 KGEKPEKFQAA-GYGEYHPIAKNDNYVDRAKNRRVNILIVGEK 238



 Score = 43.4 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++  I  +      W   YAD +T+L+ FF++++  +  D    K +   F        +
Sbjct: 3   RRKKIQQSEGGGEEWLQTYADTITLLLTFFVLLYASSNLDVVKFKQMSSSFQNVFSGNNS 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLS 101
            S   F+           +   S
Sbjct: 63  NSILDFNASGEAPIVGPPEEMGS 85


>gi|146298593|ref|YP_001193184.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146153011|gb|ABQ03865.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 314

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 118/299 (39%), Gaps = 11/299 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           LV+  ++AT   +KK I         +L   ++ I DE    +++               
Sbjct: 9   LVVLALSATSCVSKK-IYNDLETKYSDLKKENRSIADENADLKKAKNQLELDRDKLTKDL 67

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            S    +         ++ +  +   S +   ++  ++L ++  K ++L    + +    
Sbjct: 68  ASTKDDLAKQKADLAAEQKKYKVLQDSYNALEKNSNDALEKNMAKNRELLAQLEAKGKAL 127

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            +E   L   +             ++  +K+  TLS  +     KG+  E     + +S+
Sbjct: 128 ADEQARLDKTASRLKELEDMIAAKEEAMRKLKETLSKALTGFEGKGLTVEHKNGKVYVSM 187

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA--RDNW 285
               N  +F+  S     E    + ++G+VL  + +  + I GHTD  P+       +NW
Sbjct: 188 ---ENKLLFNSGSWAVGTEGRRAVVELGKVLGDNPDLSVLIEGHTDDDPYAGSGPIANNW 244

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            LS  RA +   +L ++  +++ +++   G +      ++      + NRRI+I++  R
Sbjct: 245 DLSTKRATAIVAILSENPKINKQKLTAA-GRSEFSPLASNATPEGKAKNRRIEIILTPR 302


>gi|159045565|ref|YP_001534359.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
 gi|157913325|gb|ABV94758.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
          Length = 208

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K  I A+        +   +      L A+     V    T + +++++       
Sbjct: 47  EDREKALIGAVVGAGVGAAIGDMLDRQARDLQAELGNDAVQIVNTGSELVVTMPQD---I 103

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S++        L  +   L    +    + GHTD +     A  N  LS  RA +
Sbjct: 104 LFAVDSAVVQSTLQSDLAALSRNLLDYPDTTVQVVGHTDNT---GSAGYNQELSQRRASA 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
              +L+++GV   R+    G    +   ++  +   + NRR++I++  R
Sbjct: 161 VAAILLQNGVPSSRVVAF-GRGEDQPIASNLDEAGRAQNRRVEIIITPR 208


>gi|255067217|ref|ZP_05319072.1| OmpA family protein [Neisseria sicca ATCC 29256]
 gi|255048585|gb|EET44049.1| OmpA family protein [Neisseria sicca ATCC 29256]
          Length = 261

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  E     I + + +      F   S+    +    L    E
Sbjct: 111 YMDYQEKKLRENLKNTNIEVERQGNQIKLVMPENVT---FATGSAALSDQARNALATASE 167

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA +    L   GV+  R++   G+ 
Sbjct: 168 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRALAVADYLQSRGVNGSRLTTA-GYG 223

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                 ++      + NRR++IL+   Q
Sbjct: 224 SRHPIASNATAEGRAQNRRVEILINPDQ 251


>gi|269121368|ref|YP_003309545.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
 gi|268615246|gb|ACZ09614.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
          Length = 215

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F  +SS         L  I  VL    +  I++ GHTD++        N  LS++
Sbjct: 107 PENVTFATNSSTISSRFTNTLDSIASVLKEYPDSNITVSGHTDST---GNDAINNPLSVN 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA S    L + G++  RI+ + G+   +   ++      + NRR++I +  +
Sbjct: 164 RANSVANYLKQEGIASSRITAV-GYGSKQPVASNSTSDGRAQNRRVEIKITAK 215


>gi|187933571|ref|YP_001885053.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
 gi|187721724|gb|ACD22945.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
          Length = 247

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 70/174 (40%), Gaps = 6/174 (3%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +  +P +  E                        +  +N+   +       G+++ + D 
Sbjct: 73  DGKVPIIGGESDTEGVIDAESLGKESMYKDVKDYVEKNNLSGAMDIVQDERGVILELKDS 132

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLD 290
               +F+   +  +P +  VL K+  +++     + + GHTD  P  N     NW LS  
Sbjct: 133 ---VLFESGQADLIPGSKEVLDKVDTLISALPNSVIVEGHTDNVPISNYKYASNWELSTQ 189

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           RA +  +  +++  ++      +G+  +R  + ++     + NRR++IL+ + +
Sbjct: 190 RAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENKAKNRRVNILIINEK 243



 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 4/136 (2%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK + D        W   Y+D +T+L+ FF++++ ++  D    ++I Q F     +
Sbjct: 1   MARKKKSDDGGGLRGDEWLATYSDCVTLLLTFFILLYSMSTVDAQKVQSISQAF----VS 56

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +MT   G    +          I    D     ++  L   S  +  +    +NN+    
Sbjct: 57  VMTGQSGDTFLKYNQYDGKVPIIGGESDTEGVIDAESLGKESMYKDVKDYVEKNNLSGAM 116

Query: 136 NSQQSEHCKNSLTRDS 151
           +  Q E       +DS
Sbjct: 117 DIVQDERGVILELKDS 132


>gi|94268092|ref|ZP_01291083.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93451732|gb|EAT02500.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 240

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    + P   ++ +L+++ E+LA      + I GH+D  P  +     NW LS  RA +
Sbjct: 128 FASGRAEPREPSLPILERLAELLAGKPAYRVIIAGHSDDLPISSERYPSNWYLSSARAVA 187

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             + L + GV   R++   G A  + ++A+D     + NRR++I +   +
Sbjct: 188 VAEYLQQQGVDPGRLTT-QGHAEFKPRVANDSPQNRAKNRRVEITLLRDE 236


>gi|329847657|ref|ZP_08262685.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
 gi|328842720|gb|EGF92289.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
          Length = 208

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L ++   + V    +   I++S+        F   S+      + VL  +  
Sbjct: 67  YMDRQNKDLRSELEGRNVYVTRSGDNIILSMPGDVT---FSSGSADLNGGFMPVLNDVAT 123

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L       I + GH D+         N  LS  RA +    L+   V  +RI  ++G  
Sbjct: 124 ILNQYPSTYIDVVGHADSQ---GTDAFNMDLSERRANAVAGYLVGQKVKSERIY-VAGAG 179

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                 ++D     + NRR++I +   Q
Sbjct: 180 ESSPIASNDTADGRARNRRVEITLRPIQ 207


>gi|258593360|emb|CBE69699.1| OmpA/MotB precursor [NC10 bacterium 'Dutch sediment']
          Length = 249

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+    E++ +L  + E+L+   +  ++I GHTD+      A  N +LS  RA S 
Sbjct: 147 FAFNSAELTTESLTILDGVAEILSKHPDLKVTIAGHTDSV---GTADYNKKLSQRRAESV 203

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L   GV+  +++ + GF   +   ++D       NRR+++
Sbjct: 204 RNYLASHGVNAAKLTAV-GFGEEQPIASNDEAEGRTKNRRVEL 245


>gi|332557731|ref|ZP_08412053.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
 gi|332275443|gb|EGJ20758.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
          Length = 525

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 16/297 (5%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +    A+        +        +   +    R+       +      + +++ + G 
Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNTREGE 291

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             +  +   L N       +Q           +++   +  +   L   +N         
Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQVASE 351

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             +   L    + RL+   K ++   S        + VL       ++       +  +F
Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287
           +  S+   PE    +  + + L             +I + GHTD  P       RDNW L
Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S  RA S  + + +S G    R+   +GF  +R     D     + NRRI++ + +R
Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525


>gi|257459102|ref|ZP_05624221.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
           RM3268]
 gi|257443487|gb|EEV18611.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
           RM3268]
          Length = 340

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           V+ +      +I +    N   F   SS   PE +  ++ + +VL    +   I  GHTD
Sbjct: 219 VVVDEYGCEKVIRLNLGVN---FATDSSKISPEFMNQIKNVSDVLVAHPDYKVILEGHTD 275

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           ++        N +LS  RA +    L   GV   RI+ + G+   +    +      + N
Sbjct: 276 ST---GSNAYNQKLSERRAAAVGGALKSFGVDASRITTV-GYGETKPIATNATKAGRAQN 331

Query: 332 RRID 335
           RR+D
Sbjct: 332 RRVD 335


>gi|223039024|ref|ZP_03609315.1| outer membrane fibronectin-binding protein [Campylobacter rectus
           RM3267]
 gi|222879663|gb|EEF14753.1| outer membrane fibronectin-binding protein [Campylobacter rectus
           RM3267]
          Length = 293

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                  P +++   +       L D    + + +           V+ + T    +I +
Sbjct: 127 GFGAKNAPVVAESPKMQEPAVVSLDDDNDGVLNDVDQCPNTPAG--VVVDETGCEKVIFL 184

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
            D      F   S    P+ +  ++K+   +  +     +  GHTD+         N +L
Sbjct: 185 RDLDVN--FAFDSYKITPKYLEEIKKVAMFMGENPGYRIVLSGHTDSV---GTEAYNQKL 239

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           S  RA +  + L + GVS D+I+ I G+   +    +      + NRR++
Sbjct: 240 SEKRANAVAKALEELGVSADKITAI-GYGELKPIATNKTKEGRAENRRVE 288


>gi|254492090|ref|ZP_05105265.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxidans DMS010]
 gi|224462642|gb|EEF78916.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxydans DMS010]
          Length = 224

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 9/206 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +     C  +      K      +          ++     ++   + A+      + + 
Sbjct: 11  ATALSGCAANDPNQKTKAGAAIGAAAGALVGYAVDDGAGGVIAGAAVGALAGGGVGRYMD 70

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +     + L  +     +  +      L   ID  N   FD  S+         L K+ 
Sbjct: 71  NQQKEMEAALAEEQARHELEIQQLENETLK--IDIANEVSFDFDSAALKSAFTPTLSKVA 128

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +VL      +I + GHTD+         N RLS  RA S        GV+  R+  I G 
Sbjct: 129 DVLQRYPNTIIHVVGHTDSV---GSESYNQRLSERRAQSVVDYFSSRGVATGRLYAI-GR 184

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                +  ++       NRR++I V+
Sbjct: 185 GETEPRATNETEAGRQLNRRVEIFVK 210


>gi|156936614|ref|YP_001440528.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156534868|gb|ABU79692.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
           BAA-894]
          Length = 567

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 9/151 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + L   + + +S   A      V          I +       +FD         +  
Sbjct: 398 QGEKLIPPLDAAISDWSAPVSSPPVNKNIITEPQTIRL---DALSLFDTGQWRLKTGSTK 454

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL      +       I + GHTD        R N +LSL RA +    +  +G   +  
Sbjct: 455 VLVNALVGIKARPGWLIVVAGHTDDV---GDERANQQLSLKRAEAVRDWMRGTGDVPESC 511

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             + G+   R  + +        NRR++I +
Sbjct: 512 FAVQGYGESRPAVPNTTAEGRALNRRVEISL 542


>gi|292492509|ref|YP_003527948.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291581104|gb|ADE15561.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 243

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D  +++ + L+     + ++    +     +     D  +   FD  S+      +  
Sbjct: 82  MNDQQREMEAALAEERRRHQLEIQRLQDESLKL-----DIPSEVSFDHDSASLKQAFLPT 136

Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L KI +VL      V+ + GHTD++        N  LS+ RA +    L + GV   R+ 
Sbjct: 137 LDKIADVLKKYNKTVVHVIGHTDST---GSEEYNLDLSVRRAANVAVYLEQKGVPSPRL- 192

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            I G    + + ++D       NRR++I+++
Sbjct: 193 SIYGEGESQPRASNDTAAGRQLNRRVEIILK 223


>gi|257875985|ref|ZP_05655638.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
 gi|257810151|gb|EEV38971.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
          Length = 254

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 8/182 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +       ++ +  A++ +   Q L K        L A  + +         G+ 
Sbjct: 73  ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLH 132

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282
           I++    ++ +F   S+     T   L  + + L       I I GHTD  P +     +
Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            NW LS  RA +  +  +  G   ++ + I  FA    K  ++     S NRR++++++ 
Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249

Query: 341 RQ 342
            +
Sbjct: 250 TE 251



 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 53/122 (43%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W + Y+D +T+L+A F+VM+ +   DD+  + I+  F     +  + 
Sbjct: 2   KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIKSEFGTILSSHHSN 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  I    +  E + + K   S +    + +V  ++ +   +K   +L   +      +Q
Sbjct: 62  SSVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQ 121

Query: 140 SE 141
           +E
Sbjct: 122 TE 123


>gi|115360213|ref|YP_777351.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115285501|gb|ABI91017.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 228

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 8/179 (4%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +     +     L++    A           ++  + L+ L A      +       G
Sbjct: 52  QLAKYNALDARYQTLARHDGGASSVMAAAPATPERAPAWLTSLDALKTNGRISLVRAPHG 111

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-A 281
           I I I  +    +F+   +  LP+   VL +I   L+   T  I + GHTD++P  N   
Sbjct: 112 IEIGIDAK---ILFNVGDARLLPDATPVLSEIARALSEHATGDILVEGHTDSAPIANAKY 168

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
             NW LS  RA S  + L + GV+  R++ I G A  +  +A D  P  + NRR+ I V
Sbjct: 169 ESNWELSSARAGSVVRYLAERGVAPHRLAAI-GRADTQPLVAGDDAPARARNRRVTIFV 226



 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
           G W I YAD +T LM  FL ++++         A++  +    ++   AS  +      
Sbjct: 27 SGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARHDGGASSVMAAAPAT 83

Query: 90 PERSS 94
          PER+ 
Sbjct: 84 PERAP 88


>gi|255533363|ref|YP_003093735.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255346347|gb|ACU05673.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 282

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             L   +++ L+  ++   ++ V  +  +  + IS+ D     ++   S   LP+    L
Sbjct: 116 DSLNMVLTNNLTRSLSREELRDVDVQVLKGVVYISLSDNM---LYKSGSYEILPKAGETL 172

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRI 309
            KI +++    +    I G+TD  P      R+NW LS  RA S  Q L    GV   R+
Sbjct: 173 SKIAKIIKDYRDYDVLIEGNTDNVPISMVNIRNNWDLSALRASSVVQALQNTYGVDPKRL 232

Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   G   +    A+D     + NRR  I++  +
Sbjct: 233 TAG-GRGEYNPLAANDTEAGKAKNRRTQIIITPK 265


>gi|149913202|ref|ZP_01901736.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
 gi|149813608|gb|EDM73434.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
          Length = 222

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L        V    T   +++++       +FD  S+         L  + 
Sbjct: 80  NMLDRQEAQLRQQLDDDRVQITNTGDRLIVTLPQD---ILFDVDSASVRSGLRDDLMTVA 136

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    +  + + GHTD +     A  N +LS  RA +   VLM  GV+  RI    G 
Sbjct: 137 SSLRDYPDSTVQVVGHTDNT---GDAGYNQQLSERRANAVADVLMDGGVAFSRIQTF-GR 192

Query: 316 AHHRLKIAS--DPMNSANRRIDILVE 339
             ++    +  D   + NRR++I++ 
Sbjct: 193 GENQPVADNLTDAGRAQNRRVEIVIL 218


>gi|256846747|ref|ZP_05552203.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|256717967|gb|EEU31524.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
          Length = 190

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q L        S  +    +K V    +     ++I+    +  FD   S   P+   
Sbjct: 25  AVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYD 84

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L+ I E +  +   I+I GHTD+         N++LS  RA S    L++ G+SEDRI 
Sbjct: 85  LLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIV 141

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            I      +    +      + NRR++  +  R+
Sbjct: 142 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 175


>gi|259907647|ref|YP_002648003.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
 gi|224963269|emb|CAX54753.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
 gi|283477490|emb|CAY73406.1| Chemotaxis protein motB (Motility protein B) [Erwinia pyrifoliae
           DSM 12163]
          Length = 302

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 3/202 (1%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                     K                 +   +     +K+   K  + L+ +   + + 
Sbjct: 64  PIKPTMGQGNKTSFSESVIPGGGDDVIRQEGEVSKYQVDKLDKFKNVESLKKVKTHLEAM 123

Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +       N    +L   T  G++I I D +  PMF   S  P      +LQ +  +L  
Sbjct: 124 IESDPRLSNFKSNLLLTLTDDGLMIQITDSQERPMFKTGSESPESYMKGILQALVPLLKE 183

Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +S+ GHTD+  +   +    NW LS  RA +A +VL+ +G+ +D I ++ G     
Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLVNAGLGDDHILRVIGTGSRM 243

Query: 320 LKIASDPMNSANRRIDILVEDR 341
                   N  NRRI ILV  +
Sbjct: 244 GLTDISADNPMNRRISILVLSK 265



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query: 14  FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            II ++K       ++ G+WKI YADFMT +MAFFLVMW++ ++ D  ++ I  YF    
Sbjct: 6   PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           K  M         ++       + I    +
Sbjct: 66  KPTMGQGNKTSFSESVIPGGGDDVIRQEGE 95


>gi|162454068|ref|YP_001616435.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
 gi|161164650|emb|CAN95955.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
          Length = 985

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 88/289 (30%), Gaps = 21/289 (7%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P          G F  Q     +   +                + G         + + 
Sbjct: 701 QPGAFGPQPGQPGPFGPQPGQPGAFGPQPGQPGPFGPQPGPFGPQPGGPGAAPSPAQPQG 760

Query: 130 NIFYLSNSQQSEHCKNS----LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE---- 181
             F   +       K        +D+E G  +  +T         E       S      
Sbjct: 761 PTFVDVDCSLEALPKTGNIVGTVKDAESGDAVAGATIRLVDAAGREQTATADGSGAFRFP 820

Query: 182 --KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236
                A+  K   Q     ++        D      + +  +  ++  + ++        
Sbjct: 821 DLPAGAVTLKVEAQGYMNHVNQADVRTSEDTRAALTVNKRPKISLVKVLGNEIKISRQIH 880

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+  L ++  ++++I +VL  +  +  +   GHTD +        N  LS  RA +
Sbjct: 881 FETDSAKILGDSNALMEEIADVLQRNPNIRKVEIQGHTDNT---GGREHNQTLSEARANA 937

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
               L+++GV   R+    G+   R    +      + NRR+  ++ ++
Sbjct: 938 VRAWLIRAGVDGSRLLA-KGYGQDRPVAPNVTPANKAKNRRVQFIIVEK 985


>gi|126741155|ref|ZP_01756836.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
 gi|126717792|gb|EBA14513.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
          Length = 474

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
              L   T+         +       + +            + ++I+     L  +    
Sbjct: 285 SWALSNETENVVGQLSIVDAGQKAELERRAPPPPPPPPAPTIEEQIAKVSGFLEPEIAGG 344

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V        ++I +     + MF   S          +Q++ E L      + + GH+D
Sbjct: 345 IVKVFQKGNVLIIRL---AGSGMFGSGSDQLSKAFRTPVQRLAEALNDEKGQVIVVGHSD 401

Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
             P R+     N  LSL RA S  + + K+    +R+S   G A       +      + 
Sbjct: 402 NIPIRSSRFPSNMALSLARAKSVMEGMAKAMAEPERLSA-EGRADQEPIADNGTKAGRAK 460

Query: 331 NRRIDILVEDRQG 343
           NRRI+IL+    G
Sbjct: 461 NRRIEILLVQEVG 473


>gi|126461734|ref|YP_001042848.1| hypothetical protein Rsph17029_0965 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103398|gb|ABN76076.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 525

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 16/297 (5%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +    A+        +        +   +    R+       +      + +++ + G 
Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNAREGE 291

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             +  +   L N       +Q           +++   +  +   L   +N         
Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQVASE 351

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             +   L    + RL+   K ++   S        + VL       ++       +  +F
Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287
           +  S+   PE    +  + + L             +I + GHTD  P       RDNW L
Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S  RA S  + + +S G    R+   +GF  +R     D     + NRRI++ + +R
Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525


>gi|206974802|ref|ZP_03235717.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
 gi|222095352|ref|YP_002529412.1| flagellar motor protein mots [Bacillus cereus Q1]
 gi|206746821|gb|EDZ58213.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
 gi|221239410|gb|ACM12120.1| chemotaxis protein MotB, putative [Bacillus cereus Q1]
          Length = 225

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +     +   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKTVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ K+          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|89891334|ref|ZP_01202840.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
           BBFL7]
 gi|89516365|gb|EAS19026.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
           BBFL7]
          Length = 289

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           + +++   + +   + +     +  + ISI D+    +F   S         VL K+G +
Sbjct: 124 LVTSIKSSLGNVNDEDINVNVEKGVVFISINDKL---LFASGSDQINSNAYTVLGKVGTI 180

Query: 259 LAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           L     + + I GHTD+ P  +   +DNW LS  RA +  + L +   +   R++   G 
Sbjct: 181 LKDKANMEVMIEGHTDSQPIASANFKDNWDLSTARAAAITRYLQEKEQIDPARMTAA-GR 239

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
           +++    ++D     + NRR  I++  +
Sbjct: 240 SYYVPIASNDTAEGRAKNRRTRIIILPK 267


>gi|300919511|ref|ZP_07136009.1| OmpA family protein [Escherichia coli MS 115-1]
 gi|300413405|gb|EFJ96715.1| OmpA family protein [Escherichia coli MS 115-1]
          Length = 211

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|326316328|ref|YP_004234000.1| type IV / VI secretion system protein, DotU family [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373164|gb|ADX45433.1| type IV / VI secretion system protein, DotU family [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 450

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
              +    +     ++  ++  M     +     ++   L   + + +   V        
Sbjct: 250 NYRLASRSDELFAAINAIRLPKMPSVVAVAPPKPRLRQFLEPEIREGL---VEVNDQADR 306

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282
             +++   R   +F+ +S+   P  + V+Q++   L   +  + + G++D  P R     
Sbjct: 307 STVTL---RGDGLFEPASTEVKPRYVAVIQRVASALNEVSGKVVVNGYSDNQPIRTARFP 363

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            NW LS +RA +   +L ++     R+    G A       +      + NRR++I++ 
Sbjct: 364 SNWHLSQERAQAVAAMLQRTITDGSRVKA-EGRAESDPIAPNSTPEGRALNRRVEIVLL 421


>gi|325278144|ref|ZP_08143653.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
 gi|324096719|gb|EGB95056.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
          Length = 263

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        +    + +    +   +   +     A
Sbjct: 39  QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EGELKNAAAQRAQAKLDARDAQIAKLQNSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    + G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSASYNQSLSERRANSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVA-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250


>gi|86160165|ref|YP_466950.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776676|gb|ABC83513.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 542

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 15/231 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G  +  +Q   L+++   + N Q     +  +  +            +   +++  +   
Sbjct: 322 GQAHTPEQCPALDDDGDGVPNGQDRCPLEKGVAENQGCPDKDTDRDGVPDRLDRCPSVPG 381

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              ++       +     D  +               +    +  +        D +   
Sbjct: 382 ATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKI-------DIKEKV 434

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            FD   +    ++  +L  + +++       V++I GHTD++     A  N  LS  RA 
Sbjct: 435 YFDTGKATIKAQSNALLDDVAKLVAANPQVGVVTIEGHTDST---GSAATNRALSQKRAE 491

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           S    L+  GV   R+    GF   R   ++        NRR++  +++  
Sbjct: 492 SVKDYLVSKGVDASRLEA-KGFGPDRPVESNKTAKGREANRRVEFTIQNAN 541


>gi|166710885|ref|ZP_02242092.1| outer membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 365

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           +
Sbjct: 119 EEEFDATPNPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPREN 178

Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +       +P                      L D    +++           + +
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     + I +        FD + S   P+ I +L +  E+L    +  + + GHTD+
Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326
              +     N +LS  RA + Y  L K+GV   R+    G+   R    +          
Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351

Query: 327 MNSANRRIDILVED 340
             + NRR ++ V++
Sbjct: 352 GRAKNRRTELNVQN 365


>gi|110678313|ref|YP_681320.1| OmpA family domain-containing protein [Roseobacter denitrificans
           OCh 114]
 gi|109454429|gb|ABG30634.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
          Length = 221

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L  D     V    T   +++S+       +F   S    P+    L  +  
Sbjct: 81  NLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQDL---LFATDSFSVRPDLQNDLYTVAG 137

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L +     I + GHTD+      A  N RLS  RA S   +LM +GV+  R+  I G  
Sbjct: 138 SLQNYPASTIQVIGHTDSD---GDAAYNQRLSERRAGSVAGILMDAGVTPSRLQTI-GRG 193

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
             +   +  ++   + NRR++I++ 
Sbjct: 194 ESQPVASNLNEAGKAQNRRVEIIIL 218


>gi|226314899|ref|YP_002774795.1| chemotaxis protein [Brevibacillus brevis NBRC 100599]
 gi|226097849|dbj|BAH46291.1| probable chemotaxis protein [Brevibacillus brevis NBRC 100599]
          Length = 260

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 7/195 (3%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           +K +   +   LE    + +   +   S++     KR   L D +++   T+   ++  +
Sbjct: 69  QKLELQREVYQLEARQKELKGEKVKEGSEDTANVPKRPMGLSDSSERDMETVRNQLSSAL 128

Query: 212 VK-GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
            +  + +E T  G+ I +     T +F   S+    +   V+  +  VL      + I G
Sbjct: 129 AELNLDYEETEEGLRIRL---PETILFTSGSADLQAQGKQVVGTVAGVLKRFEHKVRIEG 185

Query: 271 HTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327
           +TD  P  R+  + NW LS  RA S  + ++ +         ++G   ++  + +     
Sbjct: 186 YTDDVPISRSSFQSNWELSSARAISVMREMVDANSLPASRFTVAGLGEYKPLVDNSNAEN 245

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++I++   +
Sbjct: 246 RAKNRRVEIVILGEK 260


>gi|218961893|ref|YP_001741668.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730550|emb|CAO81462.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 911

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 7/132 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            + +      + +    + +     F+ + ++  P+++ +L+ I   +  +    I + G
Sbjct: 665 QQNITKNFRLSKLEKEAVFELENVEFEFNKAVLTPKSLEILKPILATMKENETLEIELSG 724

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
           HTD        + N +LS  RA +    L+K+G+   RI  + G+   +   ++D     
Sbjct: 725 HTDNI---GSKQYNRKLSEARAKAVADYLIKNGIDPKRIKTV-GYGFDKPIASNDTPEGR 780

Query: 329 SANRRIDILVED 340
             NRR ++ +  
Sbjct: 781 QRNRRTEMKILG 792


>gi|324019871|gb|EGB89090.1| OmpA family protein [Escherichia coli MS 117-3]
          Length = 211

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTVLLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAQIMPFFKRLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  + +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175


>gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
 gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
          Length = 588

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 13/271 (4%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           G  L T   G+          + +   L +D  +   ++  ++  +   K  +   ++  
Sbjct: 328 GLTLGTVDIGLARVSPYIWSGALSSNALVLDGVVPSKAIADRLLESAALKFGRLKIDDRQ 387

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++          +L       +    S  L           L   +   +         
Sbjct: 388 RVAAGAPGGFETAALAALQALSRLDEASVVLRDGALSVRGEALSGNAAADLQRQLEADLP 447

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +  A + S  L  L ++++             +++ +   NT  FD   +     +   L
Sbjct: 448 EAFAAQQSVALKPLPSEDLSG------PSCQNVLNQLLAANTIRFDTGQAGIQHHSFGFL 501

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +I        +V   I GHTDA         N  LS  RA +    ++ +GV  DR+  
Sbjct: 502 DRIAFAARQCRDVRLEISGHTDADGDEGA---NQTLSERRAEAVVAYMVAAGVGPDRVVA 558

Query: 312 ISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           I G+   R    +  D   +ANRRI+I V +
Sbjct: 559 I-GYGESRPVADNETDTGKAANRRIEIRVVN 588


>gi|108761291|ref|YP_633197.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108465171|gb|ABF90356.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 640

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 80/273 (29%), Gaps = 12/273 (4%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            +     +G+ +    P+         ++ +   K + +                +    
Sbjct: 359 ADHCPTVEGLSELNGCPDGDDDGDGLPNLADRCPKEAENFNGFEDQDGCPDDPDTDGDGI 418

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                Q            ++        D +  ++  +        KE      +     
Sbjct: 419 SDAKDQCPDQAEDKDGFQDEDGCPDPDNDNDGVLDTADRCPNEAGPKENRGCPDKDTDGD 478

Query: 194 DLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +  ++ +       A N               I +++      F+ +  I +  +  +L
Sbjct: 479 GIVDRLDNCPTEPGPAKNHGCKEKQLAQIGENRIQLLEA---VYFENNKDIIIARSNKLL 535

Query: 253 QKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             +  +L    E   + + GHTD          N  LS  RA +  + L+  GV+ +R+ 
Sbjct: 536 DTVANILIAHPEVEKVRVEGHTDNR---GNPDYNLDLSQRRADAVVRYLVSKGVARERLD 592

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              GF   +    ++     + NRR++  +   
Sbjct: 593 A-KGFGPTQPIADNNTTQGRAKNRRVEFKIVGD 624


>gi|256828886|ref|YP_003157614.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578062|gb|ACU89198.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 375

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 81/270 (30%), Gaps = 30/270 (11%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            +S  K+   I    T   V L+      +    R    I         E         +
Sbjct: 100 GASIAKVPTLIGSDPTPLGVALQALEPTLQGASGRNAVIIVSDGRENAGEDSLKVAAALA 159

Query: 152 EKGKDLCKSTDLEKSINKEENYFLP----------PLSKEKILAMKRKKRLQDLAKKISS 201
           EK      +     S+N  +                 + +       +K ++D+   ++ 
Sbjct: 160 EKYNVCFHTVSFADSVNGNQPLLDSITALKPCGVGVSAAQLADDAAMQKFVRDVFYDVAG 219

Query: 202 TLSGLVADNIVKGVL--FETTRTGILISIIDQRNTPM---------FDKSSSIPLPETIV 250
            +     D+   GV    +     I+   +D    P+         FD   S   P    
Sbjct: 220 GVDPCSLDDDGDGVNNCVDKCPDTIMGLAVDADGCPIPEVIRLKVNFDFDKSDIKPAYHQ 279

Query: 251 VLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
            L      +        +   GHTD+   +     N +LS  RA +    L+ + G+   
Sbjct: 280 ELADFAAYMKQQQSFTVVEIAGHTDS---KGADEYNQKLSERRAKAVRDYLVTNFGLDGS 336

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRID 335
            +    G+   +   ++D     + NRR++
Sbjct: 337 -LFSARGYGESKPVASNDTEEGRAENRRME 365


>gi|224371370|ref|YP_002605534.1| MotB4 [Desulfobacterium autotrophicum HRM2]
 gi|223694087|gb|ACN17370.1| MotB4 [Desulfobacterium autotrophicum HRM2]
          Length = 425

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 15/305 (4%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           L M  +N  D      ++         L  +     D+       S+   +    +  T 
Sbjct: 122 LTMVSLNE-DIQALTRVKDELEQKVAILGRSLSDRDDQILVLRDRSKALAERLATQAETT 180

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
                +I +   + Q           + +++ +    +    +     + +  +    I+
Sbjct: 181 VLAQKEIEAQEIRIQALSAVLASQKEAVAREKQLSATARAEVTLLSDQITRLREQLSMIS 240

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
              +       ++    +   K+L     +  + L    ++   +          + I  
Sbjct: 241 NALSLANTQTQEKDEKIVDLGKQLNIALARKVNELEKYQSEFFGRLRKILGNNPAVQIEG 300

Query: 229 ID--QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFR 278
                +   +F+  S++   +  + L  + E L             ++ I GHTD  P  
Sbjct: 301 DRFVLQAGLLFESGSAVLGDQGRIHLTTLAETLMDIAKKIPDDINWILRIDGHTDRVPIN 360

Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
           N A   NW LS  RA +  + L + GV E R+   +GF+ +     +D   +   NRRI+
Sbjct: 361 NAAFPSNWELSAARAVAVVRFLSQRGVPEKRM-AAAGFSKYHPIDRADTPAAYQRNRRIE 419

Query: 336 ILVED 340
           I +  
Sbjct: 420 IKLTR 424


>gi|26987857|ref|NP_743282.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|148546400|ref|YP_001266502.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|24982560|gb|AAN66746.1|AE016303_1 OmpA family protein [Pseudomonas putida KT2440]
 gi|148510458|gb|ABQ77318.1| OmpA/MotB domain protein [Pseudomonas putida F1]
 gi|313497483|gb|ADR58849.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 230

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+         L  I   L     +  +S+ GHTD+         N +LS  RA+S
Sbjct: 126 FEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 182

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L++SGV       + G    +    +        NRR +I ++ 
Sbjct: 183 VTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 230


>gi|289672567|ref|ZP_06493457.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
           FF5]
          Length = 240

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 1/212 (0%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             +  S         L    E   +   + +++ + + +        ++ K  A+++++ 
Sbjct: 8   DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTVPIEAENAETKAEAVEQERL 67

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
              L +  +              +LFE T+ G+ I I+D  N PMFD  S+   P    +
Sbjct: 68  EMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDI 127

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  + + +      +SI GHTDA+PF       NW LS +RA +A + L+     + +++
Sbjct: 128 LLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVA 187

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ G+A   L    +P N  NRRIDI+V  ++
Sbjct: 188 RVVGYASSALYDHQNPTNPINRRIDIVVLTKK 219


>gi|126641241|ref|YP_001084225.1| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
          Length = 397

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 185 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 244

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 245 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 294

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 295 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 351

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 352 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 395


>gi|28211321|ref|NP_782265.1| chemotaxis motB protein [Clostridium tetani E88]
 gi|28203761|gb|AAO36202.1| chemotaxis motB protein [Clostridium tetani E88]
          Length = 252

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 8/149 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               S +   N+ + V  ++   G+L+ + D     +F+ + +     ++ +L KI +++
Sbjct: 104 DKVKSAVQKSNLQESVKIKSDARGVLLELDDS---ILFEIAQADIKQNSLPILDKINKII 160

Query: 260 AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +     + + GHTD  P +N     NW LS  RA +  +  +++     +    +G+   
Sbjct: 161 STLPNSVMVEGHTDNVPIKNYKYDSNWELSTQRAVNVLRYFVETKKQNPQRFTAAGYGEF 220

Query: 319 RLKIASDP--MNSANRRIDILVE--DRQG 343
           +    +D     S NRR+ I++   DR+G
Sbjct: 221 KPIHPNDTLENRSKNRRVTIVIVSIDREG 249



 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++        N   W   YAD +T+L+ FF++++  ++ D    K I   F         
Sbjct: 10  RRKRGKGEGVNGEGWLQTYADTVTLLLTFFVLLYSFSSVDAQKFKQISTAFQSVLSGQNG 69

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            +   F+ +N           +       +N +  K+ S  QK   Q 
Sbjct: 70  ETVFDFNMKNGDIPLVGETTQMGSATGGKENELYDKVKSAVQKSNLQE 117


>gi|239905020|ref|YP_002951759.1| hypothetical protein DMR_03820 [Desulfovibrio magneticus RS-1]
 gi|239794884|dbj|BAH73873.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 424

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                  K +  A   +++ ++L     + ++ L  +   + +     R  + I+ +D+ 
Sbjct: 57  QSKEEEKKAEKRAQDLERKTEELQTAYDALVADLRGEVDSRQIRVRQFREKLEINFVDK- 115

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLD 290
              +F   S+   P    +L ++G VLA   +  I + GHTD  P  +     NW LS  
Sbjct: 116 --ILFPSGSAEISPRGRDILTRVGAVLAKVKDKSIYVVGHTDNVPIHSALFPSNWELSAS 173

Query: 291 RAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S  + L    G++ +R + + G A ++   ++        NRR+DI+V
Sbjct: 174 RAASVIRHLSESGGLAPERFTAM-GRAFYQPVASNATPEGRQENRRVDIIV 223


>gi|330899454|gb|EGH30873.1| flagellar motor protein MotD [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330940674|gb|EGH43692.1| flagellar motor protein MotD [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330976021|gb|EGH76087.1| flagellar motor protein MotD [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 295

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +       +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +  + +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                +  + ++  +    +    S+ L  S +   +     + ++    +KR      +
Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246
                              +    + + + +  +D  N             P
Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223


>gi|66046660|ref|YP_236501.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257367|gb|AAY38463.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|330972462|gb|EGH72528.1| flagellar motor protein MotD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 295

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +       +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +  + +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232

Query: 328 NSANRRIDILVED 340
            + NRR+ +++  
Sbjct: 233 RAKNRRVVLVISR 245



 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                +  + ++  +    +    S+ L  S +   +     + ++    +KR      +
Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246
                              +    + + + +  +D  N             P
Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223


>gi|256845382|ref|ZP_05550840.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
 gi|256718941|gb|EEU32496.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
          Length = 396

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +    DE    +R        +         VD +       ++ +         +  
Sbjct: 133 KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQISADGTGV 192

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            + E    ++T + +          +E + +    Y     +       K K ++    K
Sbjct: 193 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 252

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                   L        +        I  +  +I   +  +FD       PE   VL+ +
Sbjct: 253 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 312

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  +  +   + GHTD+       + N  LS +RA +    L   G++ +    I G
Sbjct: 313 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 367

Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338
           +   R   ++D       NRR++I++
Sbjct: 368 YGESRPIASNDTAEGKQKNRRVEIII 393


>gi|196248997|ref|ZP_03147697.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
 gi|196211873|gb|EDY06632.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
          Length = 191

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 10/181 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
               ++E            ++ K K+ L  + +KI   +     + +   +    T  G+
Sbjct: 6   PPAAQDEQGQEREKQPSPAMSQKEKEGLAQVKEKIDVYIQE---NKLGGKLQTSLTEEGL 62

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-AR 282
            I+I+D     +FD  S+    +   +  ++  +L  +    + I GHTD  P  N    
Sbjct: 63  AITILDD---ILFDSGSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTDNVPIHNAQFA 119

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            NW LS+ RA +  +VL+++   + R     G+  ++   +++       NRR++IL+  
Sbjct: 120 SNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMKNRRVEILILP 179

Query: 341 R 341
           R
Sbjct: 180 R 180


>gi|313500273|gb|ADR61639.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 263

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        +    + +    +   +   +     A
Sbjct: 39  QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       K            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EADLKNASAERAKAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    + G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 SNAYPNVTKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250


>gi|162450796|ref|YP_001613163.1| hypothetical protein sce2524 [Sorangium cellulosum 'So ce 56']
 gi|161161378|emb|CAN92683.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 561

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 27/279 (9%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F   G    +      +  +P  R        +  +       D+ +  T+ +       
Sbjct: 288 FRMVGVIGYSFGIKDVEPVSPGRRFQAVPPRAADTDKDGLPD-DIDLCPTDPEDGKPPNA 346

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           ++       +  +   +   +  ++ +D  K  D +     + +    P +K+       
Sbjct: 347 DDGCPALPDRDGDGIPDISDKCPDQPEDFDKINDADGCPEDDADEDSIPDAKDACPKEPG 406

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +   +               +   + +   T  + I I          F   S+  LP +
Sbjct: 407 QPSPE------------PTKNGCPQFIRRITGSSEIQI-----LKQVQFATGSARILPNS 449

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
             +L ++  +L  + E+  +   GHTD        + N +LS DRA+S    L++  G+ 
Sbjct: 450 YSILDEVVRLLKVNPEITLVAIEGHTDNR---GSDQLNEKLSNDRAHSVRTYLIERGGID 506

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             R++   GF   R    ++       NRR++  + +  
Sbjct: 507 PARLTAA-GFGPKRPIDDNNTEAGRQKNRRVEFHIRESN 544


>gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 323

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+  S+   PE+   L  I EVL    + V+ + G+TD        + N +LS  
Sbjct: 209 MGAGNFEFDSAKLKPESANELDSIVEVLEDYPQSVVEVSGYTDT---SGPEKYNQKLSEQ 265

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +   VL+  G+ E RI+ I G        +++ +     NRR++I +
Sbjct: 266 RAQAVKAVLIAKGIDESRITAI-GKGEANPIASNETLEGRKQNRRVEINI 314


>gi|323258027|gb|EGA41706.1| hypothetical protein SEEM8283_04036 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
          Length = 418

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 285 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 341

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 342 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 400

Query: 325 DP--MNSANRRIDILVED 340
           D     + NRR++ILV +
Sbjct: 401 DSKAGRAKNRRVEILVVE 418


>gi|262198074|ref|YP_003269283.1| hypothetical protein Hoch_4901 [Haliangium ochraceum DSM 14365]
 gi|262081421|gb|ACY17390.1| Myxococcales GC_trans_RRR domain protein [Haliangium ochraceum DSM
            14365]
          Length = 1987

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 88/276 (31%), Gaps = 18/276 (6%)

Query: 73   GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            G       K  + +++       +   +   E    +  + K G  ++      L +   
Sbjct: 1680 GAPNDPEDKDGYQDEDGVPDPDNDDDGIPDTEEACPDEPENKNGYQDEDGCPDELPDTDG 1739

Query: 133  YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE-----KSINKEENYFLPPLSKEKILAMK 187
                 +  E  +     D  + +D C   D +      S +K  N   P  ++      +
Sbjct: 1740 DGHVDRVDECPEQPEDMDGFEDEDGCPDEDNDEDGVVDSADKCPNEAGPVENRGCPDTDR 1799

Query: 188  RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
                + D                  +      +   + I      +   F  + ++    
Sbjct: 1800 DGDGVVDRLDNCPDEAGSERNQGCKRRQRVRLSGDRLEI-----LDRVYFRSNRAVLQRR 1854

Query: 248  TIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +  +LQ + +VL    E   + + GHTD          N  LS  RA +    L++ GV 
Sbjct: 1855 SNPLLQNVAQVLIAHPEIEHVRVEGHTDNR---GDPTYNMNLSQSRAEAVVAFLVQEGVE 1911

Query: 306  EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
              R++ + GF   +    +      +ANRR++  + 
Sbjct: 1912 AKRLAAV-GFGETQPLEDNKTRRGRAANRRVEFNIL 1946


>gi|212283809|gb|ACJ23322.1| outer membrane protein OmpA [Vibrio parahaemolyticus]
          Length = 301

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 183 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 239

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA +    +  +G+  DR+  + G         +        NRR++++V
Sbjct: 240 ERRAQAVADYITGAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 290


>gi|254254076|ref|ZP_04947393.1| Outer membrane protein [Burkholderia dolosa AUO158]
 gi|124898721|gb|EAY70564.1| Outer membrane protein [Burkholderia dolosa AUO158]
          Length = 616

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290
            +  +FD   +   P +   + +  E++        +  G+TD          N RLS  
Sbjct: 499 DSMSLFDSGKAQLKPGSNRAMVRAIEMINAHPGKRIVVAGYTDN---AGNPDSNLRLSRA 555

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +    L+ + G+   +   I G+   R   ++D     + NRR++I +   
Sbjct: 556 RAQAVRDWLIDASGIPATQF-AIQGYGDTRPIASNDAPDGRARNRRVEITLVPD 608


>gi|237747505|ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
 gi|229378856|gb|EEO28947.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
          Length = 207

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   SI  PE    L ++   L+     + +  GHTD          N +LS  RA
Sbjct: 96  DAFFDFDKSIVKPEGKAKLDELVNALSGLDTEVIVAVGHTDWI---GTDAYNQKLSERRA 152

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            +    L+  GV  ++I    G    +    +      + NRR+++ V   +G
Sbjct: 153 NAVKAYLVSKGVPAEKIFT-EGKGKKQPIADNKTRQGRAKNRRVEVEVVANRG 204


>gi|239817126|ref|YP_002946036.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239803703|gb|ACS20770.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 315

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 8/188 (4%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                D     + E          +       K+RL  L        +  V       +L
Sbjct: 83  PGGGMDPSTRADGEVQRADAEDDADADRLASMKERLDKL------IENSPVFRQFRSQIL 136

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
            + T  G+ + I+D  N PMFD +S+  +P    +L+++G  L      I++ GHTDA  
Sbjct: 137 IDITTEGLRLQIVDNENRPMFDLASAQVVPHMRAILRELGPTLNELPNKITLSGHTDAFV 196

Query: 277 FRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           + N  R   NW LS DRA ++ + L+  G++E+++ ++ G A       S+P N  NRRI
Sbjct: 197 YSNGDRSYGNWELSADRANASRRELVMGGMAENKVLRVVGLADSMHLDRSNPRNPINRRI 256

Query: 335 DILVEDRQ 342
            I++ + +
Sbjct: 257 SIILLNHR 264



 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           ++ ++VA      + G WKI YADFMT +MAFFLVMW+++ T    ++ I ++F    K 
Sbjct: 8   VVVRRVAAHGGGGHGGGWKIAYADFMTAMMAFFLVMWLLSNTSPKQREGIAEHFRMPLKV 67

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDE 104
            ++  +      +       +    +  E
Sbjct: 68  ALSGGEKSSTSISVVPGGGMDPSTRADGE 96


>gi|94264345|ref|ZP_01288137.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93455239|gb|EAT05452.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 240

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    + P   ++ +L+++ E+LA      + I GH+D  P  +     NW LS  RA +
Sbjct: 128 FASGRAEPREPSLPILERLAELLAGKPAYRVVIAGHSDDLPISSERYPSNWYLSSARAVA 187

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             + L + GV   R++   G A  + ++A+D     + NRR++I +   +
Sbjct: 188 VAEYLQQQGVDPGRLTT-QGHAEFKPRVANDSPQNRAKNRRVEITLLRDE 236


>gi|301019118|ref|ZP_07183322.1| OmpA family protein [Escherichia coli MS 69-1]
 gi|300399377|gb|EFJ82915.1| OmpA family protein [Escherichia coli MS 69-1]
          Length = 211

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|257866373|ref|ZP_05646026.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
 gi|257873111|ref|ZP_05652764.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
 gi|257800331|gb|EEV29359.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
 gi|257807275|gb|EEV36097.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
          Length = 256

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 8/182 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +       ++ +  A++ +   Q L K        L A  + +         G+ 
Sbjct: 73  ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLH 132

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282
           I++    ++ +F   S+     T   L  + + L       I I GHTD  P +     +
Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            NW LS  RA +  +  +  G   ++ + I  FA    K  ++     S NRR++++++ 
Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249

Query: 341 RQ 342
            +
Sbjct: 250 TE 251



 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 53/122 (43%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W + Y+D +T+L+A F+VM+ +   DD+  + I+  F     +  + 
Sbjct: 2   KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIKSEFGTILSSHHSN 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S  I    +  E + + K   S +    + +V  ++ +   +K   +L   +      +Q
Sbjct: 62  SSVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQ 121

Query: 140 SE 141
           +E
Sbjct: 122 TE 123


>gi|326798978|ref|YP_004316797.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326549742|gb|ADZ78127.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 269

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 14/223 (6%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            +++N+      ++      +   R +   ++L  S+   K +          L + + +
Sbjct: 46  AQIKNDNLEDELAKLRADTASLGRRLASLEENLSSSSSEAKKLAANLAEREERLKEVEDV 105

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             KR++    L  K+   L G     +      +     + + + D+    +F   S I 
Sbjct: 106 LRKREEAGNQLKDKLQRALLGFKESGL----TVDMREGKVYVLLADKL---LFSSGSIII 158

Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLM- 300
                  L ++ +VL    E+   + GHTD    R     +DNW LS+ R+ S  + L  
Sbjct: 159 DQRGKQALAELAKVLNTQPEINMAVEGHTDNQKVRSLGQIKDNWDLSVLRSTSVVRYLTE 218

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           + G+   R+   +G         +D   +   NRRI+I++  +
Sbjct: 219 EEGIDPKRLIA-TGKGEFTPVDTADTPEARSANRRIEIVLSPK 260


>gi|294785320|ref|ZP_06750608.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
 gi|294487034|gb|EFG34396.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
          Length = 396

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +    DE    +R        +         VD +       ++ +         +  
Sbjct: 133 KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGV 192

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            + E    ++T + +          +E + +    Y     +       K K ++    K
Sbjct: 193 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 252

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                   L        +        I  +  +I   +  +FD       PE   VL+ +
Sbjct: 253 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 312

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  +  +   + GHTD+       + N  LS +RA +    L   G++ +    I G
Sbjct: 313 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 367

Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338
           +   R   ++D       NRR++I++
Sbjct: 368 YGESRPIASNDTAEGKQKNRRVEIII 393


>gi|255323068|ref|ZP_05364204.1| outer membrane fibronectin-binding protein [Campylobacter showae
           RM3277]
 gi|255299930|gb|EET79211.1| outer membrane fibronectin-binding protein [Campylobacter showae
           RM3277]
          Length = 332

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 9/124 (7%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           V+ + T    +I + D      F   S    P+ +  ++K+   +  +     +  GHTD
Sbjct: 210 VVVDETGCEKVIVLRDIGVN--FAFDSYKITPKYLEEIRKVANFMGENPGYRVVLSGHTD 267

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           +         N +LS  RA +  + L + GVS D+I+ + G+   +   ++      + N
Sbjct: 268 SV---GAEAYNQKLSEKRANAVAKALEELGVSADKITTV-GYGELKPVASNKTKEGRAEN 323

Query: 332 RRID 335
           RR++
Sbjct: 324 RRVE 327


>gi|124003367|ref|ZP_01688217.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123991465|gb|EAY30896.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 116

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   F+ +      ++ V L  + + L  + E+   I GHTD          N  LS  R
Sbjct: 6   NNVFFEYNKYALKDKSKVELDNLVKFLKENPEISGEISGHTDNI---GDKARNRELSQQR 62

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A S    L+  GV   R+    G+   +    +D     + NRRI+  +  
Sbjct: 63  ANSVRDYLVSHGVDASRLV-YKGYGDSKPAATNDTEEGRAKNRRIEFKILK 112


>gi|42780820|ref|NP_978067.1| flagellar motor protein MotS [Bacillus cereus ATCC 10987]
 gi|42736740|gb|AAS40675.1| chemotaxis protein MotB, putative [Bacillus cereus ATCC 10987]
 gi|324325747|gb|ADY21007.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 225

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +     +   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKMVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ K+          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|51244080|ref|YP_063964.1| outer membrane protein F [Desulfotalea psychrophila LSv54]
 gi|50875117|emb|CAG34957.1| probable outer membrane protein F [Desulfotalea psychrophila LSv54]
          Length = 216

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + + +      L                 +L +    +    FD +S    P     +
Sbjct: 74  NQIGRYMDQQEQDLRNAVAASNAASVRRDQDVLTATF--KGETFFDTNSFTIKPGGWAEV 131

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++  VL       I + GHTD+         N +LS  RA +    L++ GV+ +RI  
Sbjct: 132 NRVATVLNKYPNTNIKVAGHTDSL---GNEAYNQQLSERRARAVKNALIQYGVNGNRIRA 188

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           I G+       +S+   + NRR++I++   Q
Sbjct: 189 I-GYGESLPISSSN---AQNRRVEIVITPNQ 215


>gi|322432961|ref|YP_004210210.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321165188|gb|ADW70892.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 239

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 7/182 (3%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S  + E     P+  +     +    L+    K+S  L G++ D I K  +        
Sbjct: 54  MSAAQTETAPETPVPDQLRGPTQSADPLRFDTAKLSQQLQGVLGDAIDKHEIVMQQTADG 113

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARD 283
            I  I  R    F+   +  LP     LQ   +VL      + + GH+D  P      + 
Sbjct: 114 FI--ISLRELGFFNSGEATLLPGAAAKLQDTAKVLMEDGLEVRVEGHSDDQPIHNGQFQS 171

Query: 284 NWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           NW LS  RA S   +L+ ++G    +I  ++G+  +     +  ++    NRR+D++V  
Sbjct: 172 NWELSTARAMSVLSLLVDEAGFPPTKI-SVAGYGPYHPVADNATLDGRRSNRRVDLVVLS 230

Query: 341 RQ 342
            +
Sbjct: 231 PR 232


>gi|71898965|ref|ZP_00681131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|71731211|gb|EAO33276.1| OmpA/MotB [Xylella fastidiosa Ann-1]
          Length = 375

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   S   P+ + VL++  E+L    +  + + GHTD++     A  N
Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +LS  RA   Y  L  +G+   R+    G+        +      + NRR ++ V++
Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375


>gi|322507807|gb|ADX03261.1| OmpA/MotB [Acinetobacter baumannii 1656-2]
 gi|323517407|gb|ADX91788.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
          Length = 397

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T+Q       + +               SL    +K           +++  +    +P
Sbjct: 185 DTSQTYAAAFTDKDALAGVLGALKGIPDASLEWVGDKITLKAGDAAALEALTAKVKALVP 244

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                       ++ + +      + L+ +  +N+    L +     I+           
Sbjct: 245 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 294

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    +   +L +   +L   + V   + GHTD++     A  N  LS  RA + 
Sbjct: 295 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 351

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV   ++    G    +    +        NRRI+  V
Sbjct: 352 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 395


>gi|215433387|gb|ACJ66659.1| OmpA domain protein [Myxococcus fulvus HW-1]
          Length = 620

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 75/246 (30%), Gaps = 14/246 (5%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
            D+   E  T N    + G  +    +Q         +           +  D +   D 
Sbjct: 371 TDVCPTEPETVNGFQDEDGCPDDPNAHQPSAEERQPSAPPAPLTLPPPPVDTDGDGLVDS 430

Query: 158 CKS-TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                +  +  +  E+    P        +   +    L  +  + +             
Sbjct: 431 EDLCPNAAEDTDGFEDEDGCPDPDNDQDGIPDAEDQCPLEAETINGVKDDDGCPDKGKAR 490

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDA 274
                  I+I      +   F     + L  +  +L+++   L  +   E + + GHTD 
Sbjct: 491 VRVEGARIVI-----LDKVYFATGRDVILARSHSLLRQVASTLKANPRIERVRVEGHTDD 545

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  LS  RA +    L+K G++ +R+  + G+   +    +        NR
Sbjct: 546 Q---GAEAKNLDLSQRRAKNVVDFLVKVGIAAERLEAV-GYGEAKPVDTNKTAKGRENNR 601

Query: 333 RIDILV 338
           R++  +
Sbjct: 602 RVEFNI 607


>gi|325567537|ref|ZP_08144204.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
 gi|325158970|gb|EGC71116.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
          Length = 256

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 8/182 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +       ++ +  A++ +   Q L K        L A  +           G+ 
Sbjct: 73  ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKDQTEVRLESDGLH 132

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282
           I++    ++ +F   S+     T   L  + + L       I I GHTD  P +     +
Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            NW LS  RA +  +  +  G   ++ + I  FA    K  ++     S NRR++++++ 
Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249

Query: 341 RQ 342
            +
Sbjct: 250 TE 251



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 51/122 (41%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K       +   +W + Y+D +T+L+A F+VM+ +   DD+  + I   F     +  + 
Sbjct: 2   KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIRSEFGTILSSHHSN 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           +  I    +  E + + K   S +    + +V  ++ +   +K   +L   +       Q
Sbjct: 62  ASVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKDQ 121

Query: 140 SE 141
           +E
Sbjct: 122 TE 123


>gi|126662906|ref|ZP_01733905.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
 gi|126626285|gb|EAZ96974.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
          Length = 321

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 13/303 (4%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           ++    +       + +E  +    K     S      +    +   +K  L  +    K
Sbjct: 11  VLSLTTSCVSKKIYQDLENKYADLKKEHNALSDENTTLKTDKNQLELDKNSLQTELDKVK 70

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           +  D         K+        +       ++  + ++ ++ +   +L        +  
Sbjct: 71  SERDKLAADYAATKKNLDNLKASYAALEKDSNDALEANINKNRQLLAELEAKQKALTAEQ 130

Query: 169 KEENYFLPPLSKE---KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
              N     L           K     +   KK+  TLS  +     KG+        + 
Sbjct: 131 DRLNKLKKDLEASSTRLAELEKMMADKEAAMKKLKETLSKSLKAFEGKGLTVTEKDGKVY 190

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF----RNI 280
           +S+    N  +F+  S     E    ++ +GEVL  + E+   I GHTD           
Sbjct: 191 VSM---ENKLLFESGSWTVGAEGKKAVKALGEVLGQNPEISVLIEGHTDNDKITGTIGGG 247

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             +NW LS  RA +   +L ++   + +    +G       + +D     + NRRI+I++
Sbjct: 248 VENNWDLSTKRATAIVNILGENKAIDKKNLTAAGRGEFAPLMTNDSAEGKAKNRRIEIIL 307

Query: 339 EDR 341
             +
Sbjct: 308 TPK 310


>gi|159025752|emb|CAO02050.1| outer membrane protein A [Bordetella trematum]
          Length = 165

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   +   PE   +L ++ +          I  GHTD+         N +LS+ RA +
Sbjct: 58  FFDFDKATLKPEGRQLLDQVAQQAKAINLETIIAVGHTDSI---GTEAYNMKLSVRRADA 114

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +   ++      + NRR++I +   +
Sbjct: 115 VKAYLVGQGIDPNRIYT-EGKGEAQPIASNKTAEGRARNRRVEIEIVGSR 163


>gi|209522485|ref|ZP_03271080.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. H160]
 gi|209497081|gb|EDZ97341.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. H160]
          Length = 444

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 16/298 (5%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           FFL++  +   D      + +               + D       S + +++  I    
Sbjct: 156 FFLILQRLAQ-DPARNVDVLELLYVILSLGFEGRYRLIDGGRSQLESVRERLERIIRNQR 214

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                +L +     ++    L   +     +  +     +      +  +      +  +
Sbjct: 215 GAFETELSVHWRPAERARMPLGQRMPPWVCAALAAVVVVATHIVLAQSLNRTSDP-VFDA 273

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +N+      P      I           L+  ++  +   +       V    T    ++
Sbjct: 274 LNRIRVSERPTAQASVIAPAAMLAAAATLSTFLAPEIRQGL-------VSVHETADRSIV 326

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285
           +I       +F   S+   P    ++ +I E L      I + GHTD     +     NW
Sbjct: 327 TITGDN---LFASGSATLDPAYDALIGRIAEALKSVPGKIVVTGHTDDQRLVSARFPSNW 383

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            LS  RA S   +L     +  R S   G        +++     + NRR++I +   
Sbjct: 384 HLSQARAESVRAMLASLSGAPARFSA-EGRGDAEPLASNETPAGRAKNRRVEITLLAP 440


>gi|124516288|gb|EAY57796.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
           rubarum]
          Length = 261

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 10/160 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           K   ++Q +  +    L    ++     V+       + I      +  +F    +    
Sbjct: 78  KATPQVQSVMIRALELLVQKSSEKGDMKVVQTKEGIVLRIQ-----SRFLFASGHARVRR 132

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-V 304
           + + VL+KI  +LA +   I + G+TD  P R     +NW LS  RA +    L++ G +
Sbjct: 133 KAVPVLRKIAALLARTNHEIRVHGYTDNQPIRTSRYPNNWALSTMRAVNVLTRLLEYGSI 192

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              R+    GF   R   ++        NRR++IL+ +R+
Sbjct: 193 DPGRMGAA-GFGKFRPIASNLTPEGREKNRRVEILIMNRE 231



 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          K    +   NL  W + YADF+T+L AFF++++ I + +    + +         +
Sbjct: 3  KKPRHEEHENLERWLVSYADFITLLFAFFVMLYAIASVNTGKFRVLSNAIVAAFTH 58


>gi|95928801|ref|ZP_01311547.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95135146|gb|EAT16799.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 415

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 74/287 (25%), Gaps = 21/287 (7%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
           A + + +  +                  F  Q P      +  D  ID      +    +
Sbjct: 143 AVNTEVRHMLATSGESNNLLASAGLVYYFGGQKPAPAPLDSDGDGVIDADDQCPNTPAGV 202

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
              +         + ++   +         ++                   +    +   
Sbjct: 203 TVNSMGCPLDTDGDGVYDYLDKCPGTPAGVAVDGKGCPLDTDGD------GVYDYLDKCP 256

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                  + A+     +      +   +           V     +  + + I       
Sbjct: 257 GTPKGVAVDAVGCPLPMDSDGDGVYDDVDRCPNSPAGAHVDEYGCQLVLTLLIE------ 310

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD + +   P+ I  +      +         I GHTD+         N +LS  RA +
Sbjct: 311 -FDTNKADIRPQHIQDMTNAAAFINKYPGEKILISGHTDSD---GSEAYNQQLSQRRADA 366

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
               L+++  +    ++   GF   +    +        NRR+++ +
Sbjct: 367 VKAYLIQNYAIDGTNLTA-KGFGESQPIADNTTAAGKQKNRRVELSL 412


>gi|71276570|ref|ZP_00652844.1| OmpA/MotB [Xylella fastidiosa Dixon]
 gi|71901217|ref|ZP_00683319.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|170730957|ref|YP_001776390.1| outer membrane protein [Xylella fastidiosa M12]
 gi|71162641|gb|EAO12369.1| OmpA/MotB [Xylella fastidiosa Dixon]
 gi|71729028|gb|EAO31157.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|167965750|gb|ACA12760.1| outer membrane protein [Xylella fastidiosa M12]
          Length = 375

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   S   P+ + VL++  E+L    +  + + GHTD++     A  N
Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +LS  RA   Y  L  +G+   R+    G+        +      + NRR ++ V++
Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375


>gi|85858897|ref|YP_461099.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
 gi|85721988|gb|ABC76931.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
          Length = 180

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           +    FD +S+   P+    + ++  VL    +  I + G+TD+   +     N  LS  
Sbjct: 66  KGDVTFDTNSAEIRPDLYFEIDRVAGVLKQYPDTFIRVEGYTDS---KGSDTYNMDLSKR 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +   +L++ GV+E+RI ++ GF        +D       NRR++I +
Sbjct: 123 RANAVKNLLVQRGVAENRI-EVVGFGETMPVATNDTEAGRQKNRRVEIKI 171


>gi|323225691|gb|EGA09915.1| hypothetical protein SEEM0055_14308 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 324

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 191 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 247

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 248 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 306

Query: 325 DP--MNSANRRIDILVED 340
           D     + NRR++ILV +
Sbjct: 307 DSKAGRAKNRRVEILVVE 324


>gi|322614563|gb|EFY11492.1| hypothetical protein SEEM315_18040 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620081|gb|EFY16953.1| hypothetical protein SEEM971_15751 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623376|gb|EFY20215.1| hypothetical protein SEEM973_06161 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629326|gb|EFY26105.1| hypothetical protein SEEM974_10273 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632046|gb|EFY28800.1| hypothetical protein SEEM201_09439 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637216|gb|EFY33918.1| hypothetical protein SEEM202_19199 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639968|gb|EFY36639.1| hypothetical protein SEEM954_15657 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645904|gb|EFY42424.1| hypothetical protein SEEM054_14670 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652397|gb|EFY48751.1| hypothetical protein SEEM675_07291 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652601|gb|EFY48951.1| hypothetical protein SEEM965_20397 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660411|gb|EFY56647.1| hypothetical protein SEEM19N_20108 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664564|gb|EFY60757.1| hypothetical protein SEEM801_06607 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669383|gb|EFY65533.1| hypothetical protein SEEM507_01240 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670929|gb|EFY67062.1| hypothetical protein SEEM877_06997 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678832|gb|EFY74887.1| hypothetical protein SEEM867_12360 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681861|gb|EFY77886.1| hypothetical protein SEEM180_16428 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687987|gb|EFY83953.1| hypothetical protein SEEM600_10746 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194341|gb|EFZ79536.1| hypothetical protein SEEM581_21554 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197757|gb|EFZ82889.1| hypothetical protein SEEM501_21645 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203447|gb|EFZ88472.1| hypothetical protein SEEM460_07455 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206808|gb|EFZ91761.1| hypothetical protein SEEM020_02639 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213373|gb|EFZ98174.1| hypothetical protein SEEM6152_07603 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214666|gb|EFZ99417.1| hypothetical protein SEEM0077_18540 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221803|gb|EGA06208.1| hypothetical protein SEEM0047_03122 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323230011|gb|EGA14131.1| hypothetical protein SEEM0052_01387 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233750|gb|EGA17839.1| hypothetical protein SEEM3312_07048 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238556|gb|EGA22614.1| hypothetical protein SEEM5258_09862 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244244|gb|EGA28253.1| hypothetical protein SEEM1156_09790 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246405|gb|EGA30388.1| hypothetical protein SEEM9199_12008 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252212|gb|EGA36065.1| hypothetical protein SEEM8282_14849 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323259875|gb|EGA43506.1| hypothetical protein SEEM8284_21890 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265110|gb|EGA48609.1| hypothetical protein SEEM8285_20494 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272673|gb|EGA56080.1| hypothetical protein SEEM8287_15269 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 434

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
           D     + NRR++ILV +
Sbjct: 417 DSKAGRAKNRRVEILVVE 434


>gi|218783104|ref|YP_002434422.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764488|gb|ACL06954.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 217

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                      +     E     +++++    N+ +F  +SS   P     L+ I +V+ 
Sbjct: 80  KMGKQAQELEQIPNTQVEVQEDKVVVTM---DNSILFAVNSSTVQPAAQGTLRDIAQVMV 136

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +  I ++GHTD++        N +LS  RA     +L+  GV   RI+ I G     
Sbjct: 137 KYPDTQIMVKGHTDST---GGEEYNQQLSERRANVVKNILISYGVPAHRITAI-GLGEVM 192

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
              ++D     + NRR++I V   Q
Sbjct: 193 PIASNDTPDGRAMNRRVEIEVRPIQ 217


>gi|148287120|emb|CAK36854.1| outer membrane protein A [Bordetella ansorpii]
          Length = 181

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++   +        I  GHTD+         N +LS  RA S
Sbjct: 75  FFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSI---GSDAYNQKLSERRAAS 131

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +   ++      + NRR++I +   +
Sbjct: 132 VKSYLVSKGIDPNRIYT-EGKGEKQPVASNSTREGRAKNRRVEIEIVGTR 180


>gi|229195941|ref|ZP_04322694.1| OmpA/MotB domain protein [Bacillus cereus m1293]
 gi|228587500|gb|EEK45565.1| OmpA/MotB domain protein [Bacillus cereus m1293]
          Length = 213

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 13/219 (5%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L  +        S     +  K L K +D E+   K     +P +S EK    
Sbjct: 3   TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEK 62

Query: 187 K-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              KKR+ DL KK+ +     V +N +  V      TG+ + I+D     +FD   +   
Sbjct: 63  MVSKKRMDDLYKKLKAY----VDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVK 115

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SG 303
           PE   ++ K+          I + GHTD+ P  N     NW LS  RA +    L++   
Sbjct: 116 PEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYN 175

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 176 VEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213


>gi|313205304|ref|YP_004043961.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312444620|gb|ADQ80976.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 294

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 84/209 (40%), Gaps = 9/209 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +  +     + ++  + +    S   + +    +   L           K   R   + K
Sbjct: 79  KLEKQNGELMDKNLSQNQQFSNSLKQKSAELAAKEKLLQERENALNDLKKVVARQDSITK 138

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++++ L   +       +  E     + +S+ D+    +F   S+    + I  ++ + +
Sbjct: 139 RLNNVLRDALLGFKSDELSVEIKNGKVYVSMSDKL---LFKSGSAAIESKGIDAIKVLAD 195

Query: 258 VLAHSTEVIS-IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISG 314
           VL  + E+   + GHTD  P +    +DNW LS+ RA S  ++L  +  ++  R++  SG
Sbjct: 196 VLNKNAEIDILVEGHTDNIPIKTALYQDNWDLSVARAISIVRILTNEYRIAPTRLTA-SG 254

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341
                 + ++        NRR +I++  +
Sbjct: 255 KGEFSPRASNATPEGRASNRRTEIILSPK 283


>gi|300902537|ref|ZP_07120514.1| OmpA family protein [Escherichia coli MS 84-1]
 gi|301302019|ref|ZP_07208152.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|300405350|gb|EFJ88888.1| OmpA family protein [Escherichia coli MS 84-1]
 gi|300842571|gb|EFK70331.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|315253712|gb|EFU33680.1| OmpA family protein [Escherichia coli MS 85-1]
          Length = 211

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|182682319|ref|YP_001830479.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
 gi|182632429|gb|ACB93205.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
 gi|307578598|gb|ADN62567.1| OmpA/MotB domain-containing protein [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 375

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   S   P+ + VL++  E+L    +  + + GHTD++     A  N
Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +LS  RA   Y  L  +G+   R+    G+        +      + NRR ++ V++
Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375


>gi|167035287|ref|YP_001670518.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166861775|gb|ABZ00183.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 239

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDN 284
           + I+D     MF   S+   P     LQ +   L + +   + + GHTD          N
Sbjct: 127 VIILDDNGAVMFAFDSADLTPAAQQRLQGLVAKLDSPTVAKVRVIGHTDNV---GSDSYN 183

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LS  RA S  + L+  G+   +++   G         ++     + NRR+++ +
Sbjct: 184 QALSERRASSVAEYLIGQGLEAGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238


>gi|124006808|ref|ZP_01691638.1| OmpA domain protein [Microscilla marina ATCC 23134]
 gi|123987489|gb|EAY27198.1| OmpA domain protein [Microscilla marina ATCC 23134]
          Length = 570

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           + +N+ +     T   K   ++  +      S+ +   ++  T +    +    S  ++ 
Sbjct: 339 VQQNTEETITSETPTAKYTIKIVKDAAGNVISRDTIKTESLTTEELTSSETPTHSYKIKL 398

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             +K  N       + K+                     G +A+      + +   + I 
Sbjct: 399 IKDKNGNVVRRDTLEAKMKDKDGDGVADVNDNCPDEA--GTLANKGCPETISKAKLSDIQ 456

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDN 284
             +    ++  F    +    E+I  L+ I  ++        +I GH+D       A +N
Sbjct: 457 KELARHAHSLHFASGKTTINDESIPDLKAILAIMKKYPKNKFNIEGHSDNV---GNAANN 513

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RLS  RA S  Q  + +G++  R+    G+   R ++++        NRRI++LV
Sbjct: 514 LRLSQQRANSVRQYFVNNGIAASRLIA-KGYGQTRPEVSNATAAGRKKNRRIEVLV 568


>gi|119472020|ref|ZP_01614278.1| putative lipoprotein [Alteromonadales bacterium TW-7]
 gi|119445155|gb|EAW26447.1| putative lipoprotein [Alteromonadales bacterium TW-7]
          Length = 210

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +         +    GV        + + I        F    S         L  I 
Sbjct: 67  DYMDKQEEAFRDELAGSGVEVVREGDNLRLVIPSNIT---FATDQSYISTGFNDTLNAIA 123

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +V+       +S+ GHTD++        N  LS +RA S    L    +   RIS  SGF
Sbjct: 124 KVMNKYEKTYLSVEGHTDST---GQDSYNMNLSRERAQSVKAYLANQDIMAARIST-SGF 179

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              R    +D     + NRR++I +
Sbjct: 180 GETRPIATNDTANGRAQNRRVEIQI 204


>gi|300977371|ref|ZP_07173862.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|301045873|ref|ZP_07193060.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|300302123|gb|EFJ58508.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|300409896|gb|EFJ93434.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|315295164|gb|EFU54499.1| OmpA family protein [Escherichia coli MS 153-1]
 gi|315300866|gb|EFU60088.1| OmpA family protein [Escherichia coli MS 16-3]
 gi|324010200|gb|EGB79419.1| OmpA family protein [Escherichia coli MS 57-2]
          Length = 211

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|170767971|ref|ZP_02902424.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
 gi|170123459|gb|EDS92390.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
          Length = 222

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  +    L +LA  I++       +     +  E    G+ +
Sbjct: 21  PEETEKKARDVNEKTALLKKRSATELGELATSINTIARHAHMEA---NLEMEIVPQGLRV 77

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 78  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 137

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL  +G+ ED++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 138 LSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 192


>gi|294787848|ref|ZP_06753092.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
 gi|294484141|gb|EFG31824.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
          Length = 217

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV  +     I +++ +      F              L    +
Sbjct: 76  YMDYQEKKLREQLADTGVEVQREGNQIKLTMPENVT---FATGRYDLSVNAQNSLNGAAQ 132

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA   E    I GHTD++        N  LS +RA +  Q L+  GVS  RIS   G  
Sbjct: 133 TLATYNETTISIIGHTDST---GNDSINIPLSQNRANAVAQYLISKGVSSSRISTA-GHG 188

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
             +   ++      + NRR++IL+
Sbjct: 189 ASQPIASNSTAEGRAQNRRVEILI 212


>gi|217978498|ref|YP_002362645.1| type IV / VI secretion system protein, DotU family [Methylocella
           silvestris BL2]
 gi|217503874|gb|ACK51283.1| type IV / VI secretion system protein, DotU family [Methylocella
           silvestris BL2]
          Length = 494

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 8/148 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++      L  +   K V    T T I I + D     +F    +   P+   + ++I +
Sbjct: 350 QLQRIRLALAPEIAAKKVDATQTATKIRIIVGD---LVLFPSGQANVKPQFEPIAKRIAQ 406

Query: 258 VLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            L      I+I GHTD       +    NW LS+ RA +   VL K G+SE    ++ G 
Sbjct: 407 TLEKEPGAITIVGHTDNVKLQATSPFDSNWTLSMARAKAVAAVL-KPGLSEPARIEVDGK 465

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341
           A  +    +D     + NRR++I++   
Sbjct: 466 ADEQPIAPNDTPAGRAQNRRVEIMLARS 493


>gi|294782148|ref|ZP_06747474.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
 gi|294480789|gb|EFG28564.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
          Length = 396

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 228 IIDQRNTPMFDKSSSIPL--PETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDN 284
           +I+  +  +FD         PE   VL+ +  VL     +   I GHTD+         N
Sbjct: 283 LINLDSEVLFDVDKYDVRVHPEAEEVLKNLAIVLKEMDVKNFEIDGHTDSD---GSDEYN 339

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             LS  RA S    L+  GV+ +      G+   +   ++D       NRR++I++
Sbjct: 340 QVLSEKRANSVKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGKQKNRRVEIII 393


>gi|310781368|gb|ADP24154.1| outer membrane protein A [Bordetella avium]
 gi|310781370|gb|ADP24155.1| outer membrane protein A [Bordetella avium]
          Length = 198

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   VL ++ + +        I  GHTD+         N +LS  RA +
Sbjct: 92  FFDFDKSTIKPEGRQVLDQVADTVQSIDLETLIATGHTDSI---GAEAYNQKLSERRANA 148

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  GV  DRI    G    +   ++      + NRR++I +   +
Sbjct: 149 VKAYLVNKGVPADRIYT-EGKGEAQPVASNKTREGRAQNRRVEIEIVGSR 197


>gi|307728583|ref|YP_003905807.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307583118|gb|ADN56516.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 620

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 20/192 (10%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            + +         +         K+   +L +  S  +   +   + +G   +     ++
Sbjct: 407 DMARYRAIAPAEDAARVDALKAVKRDRDELERYASLGVPPRLGLGLYRGAPLQQPVNALI 466

Query: 226 ISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            S              +  +  +F   S++  P +  VL    E++    +    + GHT
Sbjct: 467 ASYQPPPPASVPPPTIELDSMSLFRSGSAVLNPGSNRVLIGALEMIKAHPDKRVLVAGHT 526

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329
           D+         N +LS  RA S    L  + G++  R   I G+   R K  +      +
Sbjct: 527 DSV---GTPASNLKLSEARAASVRDWLADASGIALTRF-AIQGYGDTRPKAPNSTEAGRA 582

Query: 330 ANRRIDILVEDR 341
           ANRR++I +   
Sbjct: 583 ANRRVEITLVPD 594


>gi|319778881|ref|YP_004129794.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
           [Taylorella equigenitalis MCE9]
 gi|317108905|gb|ADU91651.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
           [Taylorella equigenitalis MCE9]
          Length = 445

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +  K+++  L   + +N+   +         ++ +        F+  S+    +   V+
Sbjct: 274 TEGPKRLAQYLESEIRENL---LTVRDESDRSVVELRGDE---FFESGSADIKKQFESVV 327

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++G+ L  +   I I GHTD  P +      NW LS  RA +  +++       +RI  
Sbjct: 328 NRLGDALDETEGNILITGHTDNRPIKTIRFPSNWDLSQARADAVAKIIESRLTQPNRIRS 387

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVE 339
             G A      ++D       NRR++I + 
Sbjct: 388 -EGKADTMPVTSNDTPENRKRNRRVEITLL 416


>gi|311696932|gb|ADP99805.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 341

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 25/346 (7%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +I  +     T N        Y D ++ L+   + M ++               +     
Sbjct: 1   MIGSRRRSRSTTNVWPG----YVDALSALLMLVIFMLLVYVVSQLYLSQTLSDRDTQLAR 56

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L      + +     E  S+   +         NS+  ++ ST ++   Q    +     
Sbjct: 57  LNAQLNELSELLGLEENRSEALENQLTSLQERNNSLVGQLESTREQLMRQTAMADAQSER 116

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            +   E         + +   + + ++   S+ ++       L  ++ +   +++ L+ +
Sbjct: 117 LASMEESIDEKDDISASQQAMILRLSNQIASLREQLRQIASALELQEQMTADKEQELEQV 176

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGIL-----ISIIDQR----NTPMFDKSSSIPLP 246
           ++++++ L+  V         F      IL     + I+  R    +  +F  +S+    
Sbjct: 177 SRRLNTLLAERVNQLEQYQSEFFARLRDILAGNENVRIVGDRFLLPSELLFASASAELGE 236

Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
           E    L K+ ++L             ++ I GHTD  P        NW LS  RA +  +
Sbjct: 237 EGRQELDKLAKLLLDVSAKIPEDVDWILRIDGHTDVIPINTPRFPSNWELSTARAVAVVR 296

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            L   GV E R+   +GF             +   NRRI++ + DR
Sbjct: 297 YLAAQGVPERRM-AAAGFGEFFPVAEGTSPEALQRNRRIELKLTDR 341


>gi|150025962|ref|YP_001296788.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772503|emb|CAL43986.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 710

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 91/287 (31%), Gaps = 24/287 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           G ++    K    + N  ++ +   +D   D   T   ++ K G   +      + +   
Sbjct: 429 GIDMHLGLKIPIYQGNKKDKDNDGVLDKFDDCPETAGPIENK-GCPWKDTDNDTVLDKDD 487

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                      K     D++K   L +           EN   P L  +K   + +  + 
Sbjct: 488 KCPTIAGPAKNKGCPYEDTDKDGVLDEDDKCINEAGPIENKGCPYLDTDKDGTLDKDDKC 547

Query: 193 ----------------QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                            D    +            +K          ++  + D   T +
Sbjct: 548 PTIVGDKENAGCPWPDTDGDSVLDKDDKCPTVKGTIKNNGCPEVTADVMKKLNDYAKTIL 607

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ S S     T  VLQ I  +L        SI GHTD+         N  LS  RA + 
Sbjct: 608 FEVSKSSFQQRTFPVLQSILAILKEYPVAKFSIEGHTDSD---GKDTANQTLSETRAAAV 664

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+K+G+   R++   GF   +    +        NRR+++ + +
Sbjct: 665 MAYLVKNGIDASRLAS-KGFGESKPIATNKTKVGKILNRRVEVKLVN 710


>gi|28901041|ref|NP_800696.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837129|ref|ZP_01989796.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
 gi|260362470|ref|ZP_05775403.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
 gi|260879890|ref|ZP_05892245.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|260894565|ref|ZP_05903061.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|260900439|ref|ZP_05908834.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|28809554|dbj|BAC62529.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749546|gb|EDM60292.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
 gi|308086367|gb|EFO36062.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|308092443|gb|EFO42138.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|308107064|gb|EFO44604.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|308113361|gb|EFO50901.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
          Length = 329

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA +    +  +G+  DR+  + G         +        NRR++++V
Sbjct: 268 ERRAQAVADYITGAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318


>gi|300991173|ref|ZP_07179516.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|300305611|gb|EFJ60131.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|324015565|gb|EGB84784.1| OmpA family protein [Escherichia coli MS 60-1]
          Length = 211

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             + E        K  +L  K    L +LA  I++       +     +  E    G+ +
Sbjct: 4   PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I D +N  MF++ S+  +P    +L ++  V       I I GHTDA  ++N   +NW 
Sbjct: 61  LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LS DRA SA +VL ++G+ E+++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 121 LSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175


>gi|172062649|ref|YP_001810300.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995166|gb|ACB66084.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 228

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270
              +       GI I I  +    +F+   +  LP+   VL +I   L+   T  I + G
Sbjct: 100 NGRISLVRAPHGIEIGIDAK---ILFNVGDARLLPDATPVLSEIARALSEHATGDILVEG 156

Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327
           HTD++P  N     NW LS  RA S  + L   GV+  R++ I G A  +  +ASD  P 
Sbjct: 157 HTDSAPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQPLVASDDAPA 215

Query: 328 NSANRRIDILV 338
            + NRR+ I V
Sbjct: 216 RARNRRVTIFV 226



 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
          +      G W I YAD +T LM  FL ++++ 
Sbjct: 21 EAEGAQSGRWLISYADLITTLMVLFLALYVLQ 52


>gi|254303029|ref|ZP_04970387.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323221|gb|EDK88471.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 386

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 80/259 (30%), Gaps = 10/259 (3%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           DE    +R+     + +  E      VD +        + +         +   + E+  
Sbjct: 130 DENLTIKRNKDGSGEYTNKETGVTLQVDAQGSGQYLDDKNKVSFQIAADGTGVYKDENDD 189

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            ++T           +  ++ + +    Y             K K  +    K       
Sbjct: 190 VTITIAENSSTYTKGNITVKNNDDGSGTYNDKDKDLLIENDGKGKAIITLKEKSTEVEAK 249

Query: 205 GLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
            L        +        I  +  +I   +  +FD       PE    L  +  VL  +
Sbjct: 250 PLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAERALASLATVLKEA 309

Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
             +   I GHTD+         N  LS  RA +    L   G++ +    I G+   R  
Sbjct: 310 DVKAFEIDGHTDSD---ASDEYNQALSEKRANAVKDFLASQGLTSE--ITIIGYGESRPV 364

Query: 322 IASDPMNS--ANRRIDILV 338
            ++D       NRR++I++
Sbjct: 365 ASNDTPEGKQKNRRVEIII 383


>gi|298209046|ref|YP_003717225.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
 gi|83848973|gb|EAP86842.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
          Length = 286

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 10/249 (4%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
            DL   +  T++ ++      N   + +            Q ++  + +      KG   
Sbjct: 25  ADLEAQQQETQDRLNTATVKLNSCLEEKAGATAKANALEDQVADLRRTNADLIETKGNLT 84

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             +T    ++ K          + K L     ++   +   + ++L G + +   + +  
Sbjct: 85  TLTTKGATNLEKSLESLKEKDLQIKTLRDAVTRK-DSVTLALVTSLKGALGNMADEDIEI 143

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASP 276
              +  + +SI D+    +F   S         VL K+  V+    ++   + GHTD  P
Sbjct: 144 NVEKGVVYVSISDKL---LFKSGSYNVTSRAKEVLGKVATVVNAKPDIEFMVEGHTDNVP 200

Query: 277 FRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
            +N    DNW LS  RA S  ++L  + GV   R++   G +++    ++D     + NR
Sbjct: 201 IKNAVLEDNWDLSAKRATSVVRILQDEYGVPPQRMTAA-GRSYYIPVASNDTAEGRAKNR 259

Query: 333 RIDILVEDR 341
           R  I+V  +
Sbjct: 260 RTRIVVLPK 268


>gi|229029408|ref|ZP_04185491.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
 gi|228731867|gb|EEL82766.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
          Length = 227

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +    + + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDVEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +     +   L   V  N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDDLYKKLKAYVDSNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 183 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227


>gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
          Length = 319

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 206 GTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDT---SGAAAYNQKVSEKR 262

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L++ G+   RI    G   +    ++D       NRR++I+V
Sbjct: 263 AESVANALVEKGIDASRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 310


>gi|268595437|ref|ZP_06129604.1| ompA family protein [Neisseria gonorrhoeae 35/02]
 gi|268597225|ref|ZP_06131392.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599401|ref|ZP_06133568.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
 gi|268601994|ref|ZP_06136161.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
 gi|268604326|ref|ZP_06138493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
 gi|268682782|ref|ZP_06149644.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
 gi|268684809|ref|ZP_06151671.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268687209|ref|ZP_06154071.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268548826|gb|EEZ44244.1| ompA family protein [Neisseria gonorrhoeae 35/02]
 gi|268551013|gb|EEZ46032.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583532|gb|EEZ48208.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
 gi|268586125|gb|EEZ50801.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
 gi|268588457|gb|EEZ53133.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
 gi|268623066|gb|EEZ55466.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
 gi|268625093|gb|EEZ57493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627493|gb|EEZ59893.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 216

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  +     I + + +      F   S+         L    +
Sbjct: 67  YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 123

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 124 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 179

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 180 SHMPVASNATVEGRAQNRRVEILINPDQ 207


>gi|238784596|ref|ZP_04628602.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
           43970]
 gi|238714465|gb|EEQ06471.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
           43970]
          Length = 256

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 4/230 (1%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           + + S  ++++     N                S +   +    +      +++ +    
Sbjct: 3   VGVVSEEERQEIVAQLNGETIFDKQSYISIPSKSKSGGGKFSDSIDGHEQAKETKSNLAV 62

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    + +  K  K +++L++ I    S     +    +  E    G+ I I D +
Sbjct: 63  EVPEPEQSLEEVVDKSGKEMEELSRIIMQITSTY---DAQSNLKMEVVPQGLRILIQDDK 119

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
              MF +SS++  P    +L ++          I I GHTDAS +R+    +NW LS +R
Sbjct: 120 QRDMFQRSSALLTPFFSRLLAELAPAFNEMDNKIIITGHTDASRYRDQVRYNNWNLSGER 179

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A  A++ L+K G+SE+R+ +I+  A   L   ++P+ ++NRRI+I+V  +
Sbjct: 180 ALMAHKALVKGGLSEERVLQINAMADQMLLTPTEPLAASNRRIEIMVLTK 229


>gi|170720328|ref|YP_001748016.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169758331|gb|ACA71647.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 230

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+   P     L  I   L     +  +S+ GHTD+         N  LS  RA+S
Sbjct: 126 FEFDSARLTPADKERLNTISTRLKQEAPSARLSVTGHTDSV---GSDSYNQNLSERRAHS 182

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L++SGV       + G    +    +   +    NRR +I +E 
Sbjct: 183 VTDYLVESGVPRASFVSVVGAGETQPVADNATADGRSMNRRTEIKIER 230


>gi|77164341|ref|YP_342866.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|254434085|ref|ZP_05047593.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
           AFC27]
 gi|76882655|gb|ABA57336.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|207090418|gb|EDZ67689.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
           AFC27]
          Length = 248

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D  +++ + L+     + ++    +     +     D  +   FD  S +  P  +  
Sbjct: 81  MNDQQREMEAALAEERRGHQLEIQRLQDESLKL-----DIPSEISFDHDSDVLKPAFLPT 135

Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L KI EVL      V+ + GHTD++      + N  LSL RA +      + GV   R+ 
Sbjct: 136 LDKIAEVLKKYNKTVVHVIGHTDST---GSEKYNLDLSLRRAGNVAVYFERKGVPSQRL- 191

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            I G      + ++        NRR++I+++
Sbjct: 192 SIYGRGESEPRASNATAAGRQLNRRVEIILK 222


>gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
 gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
 gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
 gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
 gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
          Length = 319

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 206 GTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDT---SGAAAYNQKVSEKR 262

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L++ G+   RI    G   +    ++D       NRR++I+V
Sbjct: 263 AESVANALVEKGIDASRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 310


>gi|262068012|ref|ZP_06027624.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
 gi|291378280|gb|EFE85798.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
          Length = 212

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
               +    L A               +++++        F   S+         L  + 
Sbjct: 71  AYKDNQARELKAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L    E  I + G+TD++        N  LS  RA +  Q  +  GVS +RI   +GF
Sbjct: 128 QTLVKYPETRIQVNGYTDST---GGDAHNLDLSQRRANAVAQYFIAQGVSSNRIVA-NGF 183

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  ++        NRR+++ +   Q
Sbjct: 184 GSSNPIASNATPEGRQANRRVEVRILPAQ 212


>gi|85058002|ref|YP_453704.1| flagellar motor protein MotB [Sodalis glossinidius str.
           'morsitans']
 gi|84778522|dbj|BAE73299.1| chemotaxis protein MotB [Sodalis glossinidius str. 'morsitans']
          Length = 341

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 7/223 (3%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK--STDLEKSINKEENYFLPPLSKEKI 183
            +   +   +  Q+ +          E      K    ++   ++ ++   L  L + ++
Sbjct: 41  MVMWMLGATTPQQREQIADYFKMPLKEALTHNGKFNMGNIPLPVDAKDTDGLTRLRQREL 100

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +  +RL++   ++   L        +   +       G+ I IID +  PMF    +
Sbjct: 101 EHQRDIQRLKNTRHRLEQMLRNDPRLRELQPNMRITLVHDGLRIEIIDSKKRPMFATGGT 160

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300
              P    +L+ I  VL +    IS+ GHTD  P+ N      NW LS DRA ++ + L+
Sbjct: 161 AIAPYMRSILRIIAPVLDNLPNRISLAGHTDNQPYLNGERGYGNWELSTDRANASRRELV 220

Query: 301 KSGVSEDRISKISGFAHHR-LKIASDPMNSANRRIDILVEDRQ 342
           + G++ D+I ++ G A+        D   +  RRI I++  R+
Sbjct: 221 EGGLAGDKILRVIGMANTMAPAGKVDDNAAQ-RRISIVILTRE 262



 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 43/88 (48%)

Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
               ++ K     +  + +GSWKI YADFMT +MAFF+VMW++ AT    ++ I  YF 
Sbjct: 3  KPSPPVVIKWRRAQNANHYVGSWKIAYADFMTAMMAFFMVMWMLGATTPQQREQIADYFK 62

Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKI 98
             K  +T +        P    +++  
Sbjct: 63 MPLKEALTHNGKFNMGNIPLPVDAKDTD 90


>gi|50120622|ref|YP_049789.1| flagellar motor protein [Pectobacterium atrosepticum SCRI1043]
 gi|49611148|emb|CAG74594.1| chemotaxis protein [Pectobacterium atrosepticum SCRI1043]
          Length = 351

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 4/203 (1%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT  S+                +++      +  + +     + RL  L +++   +
Sbjct: 65  KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVRKAIKTDNVEKKLDEVRLNRLRERLDQLI 124

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                   +   +L E    G+ I IID +N PMF   S+   P    +L+ I  ++   
Sbjct: 125 EADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPIMNDF 184

Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              +SI GHTD   +        NW LS DRA ++ + L+  G+S+ ++ ++ G A    
Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIWGGLSDGKVLRVVGMAATMS 244

Query: 321 KIASDPM-NSANRRIDILVEDRQ 342
              +    ++ NRRI +LV  RQ
Sbjct: 245 LKQAASGNDAINRRISLLVLSRQ 267



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 70/177 (39%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T+     D  +P      +      +      + +++      +    R   +
Sbjct: 62  TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVRKAIKTDNVEKKLDEVRLNRLRERLD 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
               ++ +      + L    E+G  +       + + K  +  + P  ++ + A+ 
Sbjct: 122 QLIEADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178


>gi|237738475|ref|ZP_04568956.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
 gi|229420355|gb|EEO35402.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
          Length = 185

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
           +GV+       +++S+       +FD  SS         L  +G+ LA + ++   I GH
Sbjct: 57  EGVVIRKDGNNLVLSM---PVEILFDFDSSKVKEGVKESLNTLGKALAENKDIKLKIDGH 113

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   +    + N  LSL RA S    L+  GVS + I  I G+        +      +
Sbjct: 114 TD---YIGTEQYNLNLSLKRANSIKNYLIGRGVSANNI-SIEGYGKQNPVANNSTEAGRA 169

Query: 330 ANRRIDILVEDRQ 342
            NRR++ ++   +
Sbjct: 170 KNRRVEFIISRDK 182


>gi|194288765|ref|YP_002004672.1| replication/virulence associated protein; outer membrane protein,
           ompa family membrane protein [Cupriavidus taiwanensis
           LMG 19424]
 gi|193222600|emb|CAQ68603.1| replication/virulence associated protein; putative outer membrane
           protein, OmpA family membrane protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 425

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +   T   I+        MF +  +    + + +L K+   ++  T  
Sbjct: 292 LRDEIARGVVSVQEDATRSAITFRGDD---MFGRGRADVSEKILPLLDKVAAEVSKVTGK 348

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD  P +      N  LS +RA +  + L   GV+++R+  I G    +    +
Sbjct: 349 VTVIGHTDNVPIKTAKYPSNQALSEERAATVAEYLASKGVAKNRLEAI-GKGDSQPLADN 407

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++I+V  
Sbjct: 408 KAPVGRARNRRVEIVVTQ 425


>gi|56698398|ref|YP_168771.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680135|gb|AAV96801.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
          Length = 221

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T  ++K K       +  +          P       A         +   +    + L 
Sbjct: 31  TDPNQKAKQGALIGGILGAGVGAIANDSNPGLGALAGAAIGAAGGGLIGNSLDKQAAELR 90

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266
            +    G+    T   +++S+ +      FD  SS   P     LQK+   L    +   
Sbjct: 91  QELANDGITITNTGDRLIVSVPNDIT---FDTDSSTVRPGLRSDLQKVAAHLVRYPQSSV 147

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + GHTD+      A  N  LS  RA +   +L   GV+ DRIS + G   +    ++  
Sbjct: 148 QVIGHTDSD---GEAAYNQGLSERRAGAVADILQAGGVTYDRISTL-GMGENSPIASNLT 203

Query: 327 MN--SANRRIDILVEDRQ 342
               + NRR++I+V  R 
Sbjct: 204 PEGKARNRRVEIVVIPRN 221


>gi|294782159|ref|ZP_06747485.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480800|gb|EFG28575.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
          Length = 212

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
               +    L A               +++++        F   S+         L  + 
Sbjct: 71  AYKDNQARELKAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L    E  I + G+TD++        N  LS  RA S  Q L+  GVS +RI   +GF
Sbjct: 128 QTLVRYPETRIQVNGYTDST---GGDAHNQELSQRRANSVAQYLISQGVSSNRIVA-NGF 183

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  ++        NRR+++ +   Q
Sbjct: 184 GSLNPIASNATPEGRQANRRVEVRILPAQ 212


>gi|222081943|ref|YP_002541308.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
 gi|221726622|gb|ACM29711.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
          Length = 494

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 69/230 (30%), Gaps = 9/230 (3%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
                  K     +N       S + +    +    +        +       +   +  
Sbjct: 269 PDDDAHGKIIDAAKNLFSSDEISDELKAAPGAPNGFATAALGGLNALSRLAKGSFSLSGT 328

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQR 232
              LS E +     K      A  I        A+          +      L++ I  +
Sbjct: 329 DAKLSGEALYNGAVKSIQDSFAAAIPEGFKATPAEIAVSAPAAAVDAPNCQSLLNTILTK 388

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   +   P +  VL  I   +       + + GHTD+         N  LS  R
Sbjct: 389 SKINFDTGKARISPASSGVLDTIVATIGRCPGNAVEVSGHTDS---SGDEAANVALSEQR 445

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A +    L  +GV   R++ + G    R   ++D       NRRI+  V+
Sbjct: 446 AKAVVTYLTDAGVPASRLTAV-GLGSSRPVASNDTDEGKALNRRIEFSVK 494


>gi|213416605|ref|ZP_03349749.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 170

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL      IS+ GHTD 
Sbjct: 1   MKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDD 60

Query: 275 SPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
            P+ N      NW LS DRA ++ + L+  G+   ++ ++ G A         P ++ NR
Sbjct: 61  FPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINR 120

Query: 333 RIDILVEDRQ 342
           RI +LV ++Q
Sbjct: 121 RISLLVLNKQ 130


>gi|77462842|ref|YP_352346.1| hypothetical protein RSP_2289 [Rhodobacter sphaeroides 2.4.1]
 gi|77387260|gb|ABA78445.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
           2.4.1]
          Length = 525

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +    A+        +        +   +    R+       +      + +++ + G 
Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNAREGE 291

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             +  +   L N       +Q           ++    +  +   L   +N         
Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAHDSANNVQLQSLGTQLNSALAQVASE 351

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             +   L    + RL+   K ++   S        + VL       ++       +  +F
Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287
           +  S+   PE    +  + + L             +I + GHTD  P       RDNW L
Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S  RA S  + + +S G    R+   +GF  +R     D     + NRRI++ + +R
Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525


>gi|295699895|ref|YP_003607788.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295439108|gb|ADG18277.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 410

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   +   P +   +    E++    +    + GHTD        + N +LS  
Sbjct: 296 DSMSLFDSGRAQLKPGSTRAMVDALEMIKAHPDKRILVAGHTDNV---GNPQSNLKLSTA 352

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           RA +    L+  SG++E +   I G+   R   ++  D   + NRR++I +   
Sbjct: 353 RAQAVRDWLIDVSGIAETQF-AIQGYGDTRPIASNASDDGRARNRRVEITLVPD 405


>gi|254524919|ref|ZP_05136974.1| outer membrane protein [Stenotrophomonas sp. SKA14]
 gi|219722510|gb|EED41035.1| outer membrane protein [Stenotrophomonas sp. SKA14]
          Length = 363

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L D    +++           + +  +     + I +        FD   S   P+ +
Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDL----KGVNFDFDKSNLRPDAV 266

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +  E+L    +  + + GHTD+   +     N +LS  RA + Y  L K+GV   R
Sbjct: 267 AILGEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 323

Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
           +    G+   R    +            + NRR ++ V++
Sbjct: 324 LIGPVGYGKSRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 363


>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
 gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
          Length = 332

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 15/163 (9%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +    M  ++ + +    +             K V        +        ++  F 
Sbjct: 173 DNQPAPVMAEEQPVAEPQPVVEQAPVQEPVAAAPKMVTKTVAFQKL--------DSKSFA 224

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            +S+    E    L  +   L    +  + I GHTD++        N +LS  RA     
Sbjct: 225 HNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDST---GAEAYNQKLSEKRAQGVSD 281

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            L + G+   RI+   G        ++        NRR++I++
Sbjct: 282 ALQEQGIDAARITA-KGEGESNPIASNATAAGREQNRRVEIVI 323


>gi|313205587|ref|YP_004044764.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312444903|gb|ADQ81258.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
 gi|315022683|gb|EFT35708.1| OmpA/MotB domain protein [Riemerella anatipestifer RA-YM]
 gi|325334983|gb|ADZ11257.1| Outer membrane protein related peptidoglycan-associated
           (lipo)protein [Riemerella anatipestifer RA-GD]
          Length = 230

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I I    NT  F   S+         L K+ +VL ++ +  I++ GHTD+         N
Sbjct: 105 IKITLNENTVNFGFDSANLTSVAKTNLDKLAQVLKNNPDTNINVYGHTDSR---GADDYN 161

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            RLS  RA +    L   G++  R+    G        ++D     + NRR++  +   +
Sbjct: 162 LRLSERRANAVVSYLSSLGIASSRMIA-KGVGEAEPIASNDTDEGRAKNRRVEFAITANE 220


>gi|161504616|ref|YP_001571728.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865963|gb|ABX22586.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 574

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S     +  +L      +       I + GHTD +      + N  LSL 
Sbjct: 440 DSMSLFDSGKSALKAGSTRMLVNSLVGIKAKPGWLIVVSGHTDNT---GNPKLNQTLSLK 496

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +    +  +G   +    + G+   R    +D     + NRR++I +
Sbjct: 497 RAEAVRNWMRDTGDVPESCFAVQGYGESRPIATNDTPEGRALNRRVEISL 546


>gi|47566111|ref|ZP_00237149.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
           cereus G9241]
 gi|47557028|gb|EAL15358.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
           cereus G9241]
          Length = 225

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 10/226 (4%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           + Q         +   +         L   S++          + S  ++ +  +   + 
Sbjct: 4   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMGNTI 63

Query: 181 EKILAMKRKKRLQDLAKK--ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             I   K  +++    +   +   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 64  PDISHEKNDEKMASKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297
              +   PE   ++ K+          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L++   V + R++ + G+A  +  + +D       NRR+ I +++
Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225


>gi|110638825|ref|YP_679034.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281506|gb|ABG59692.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 320

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +    +  +F+  S + +  +   L  + +VL ++    + I GHTD          N  
Sbjct: 209 LQKAFDNLLFETGSDVIVSSSFQSLDDLAKVLRNNPLYNLYIEGHTDNV---GDDEANLD 265

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           LS  RA S    L+  GV   R++   GF   R    +D       NRR+++ +  
Sbjct: 266 LSKRRAISVKNYLVSKGVGAARLTT-DGFGEARPVDTNDTPEGRKKNRRVEMHILQ 320


>gi|260432355|ref|ZP_05786326.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416183|gb|EEX09442.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 223

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                      ++  K       L  +          P       A         +  ++
Sbjct: 23  DPGTLRVQDDPNQNAKQGAILGGLIGAGVGAIANDSDPGLGALAGAAIGAAGGGLIGNQL 82

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       G+        +++++ +      FD  S+   P     L ++G+ L
Sbjct: 83  DRQAAELRQQLANDGITIVNAGDRLIVTVPNDIT---FDTDSATVRPALRADLVRVGQNL 139

Query: 260 AHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +     + I GHTD+      A  N  LS  RA +   +L  +GVS  RI+ I G   +
Sbjct: 140 VNYPKSNVQIIGHTDSD---GDAGYNQALSERRASAVADILHANGVSYARITTI-GRGEN 195

Query: 319 RLKIASDPMN--SANRRIDILV 338
           +   ++      + NRR++I++
Sbjct: 196 QPIASNLTPEGKAQNRRVEIVI 217


>gi|260886728|ref|ZP_05897991.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
 gi|330839448|ref|YP_004414028.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
 gi|260863580|gb|EEX78080.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
 gi|329747212|gb|AEC00569.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
          Length = 303

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 9/207 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            ++  K +    +               +   E+     ++ E        +  + L + 
Sbjct: 41  ATDSSKMAQMAQAFTAAFNTGGPSFFSQMGPSESRHAERVATEDKGNSAYIQEAKALEEV 100

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                + +  + +   +    T  G++I I ++    +F   S+  + E   +   +  +
Sbjct: 101 QKELDNYIKQNGLQGELNTTMTDDGLMIRIKEK---ALFPSGSAELVGEAQKIGPVVAGL 157

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315
           LA   E + I GHTD  P        NW LS  RA +  + L  S   ++  R S I G+
Sbjct: 158 LAKIPERVVISGHTDNVPIATARYPSNWELSSQRALNFMKFLFASNTSLNPARFSSI-GY 216

Query: 316 AHHRLKIAS--DPMNSANRRIDILVED 340
           + +R    +  D   S NRR+++L+  
Sbjct: 217 SEYRPIADNKTDEGRSQNRRVEVLIAR 243



 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK           +W + Y+D MT+L+A F+ ++ ++ATD      + Q F      
Sbjct: 1   MARKKRHAPHEEEAGEAWLLPYSDLMTLLLATFIALYAMSATDSSKMAQMAQAFTAAFNT 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
              +                   D     +I +   
Sbjct: 61  GGPSFFSQMGPSESRHAERVATEDKGNSAYIQEAKA 96


>gi|260549981|ref|ZP_05824196.1| OmpA family protein [Acinetobacter sp. RUH2624]
 gi|260406973|gb|EEX00451.1| OmpA family protein [Acinetobacter sp. RUH2624]
          Length = 472

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 84/275 (30%), Gaps = 8/275 (2%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
              P       A+       +  ++ + ++    I +     ++  ++       +   +
Sbjct: 200 ETTPASGVAAAAAAPATLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKKVLSGTKDCNV 259

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
           + +  Y +     +     L           +    + ++   +   L  L+ +    + 
Sbjct: 260 DTSQTYAAAFTDKDALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 319

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLP 246
             + +    +    ++S  +  +       +     +   +         F   SS    
Sbjct: 320 HTEVVSAAPQTAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSEIPA 379

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           +   +L +   +L   T V  ++ GHTD++     A  N  LS  RA +    L+  GV 
Sbjct: 380 DNKAILDQAATLLNKVTSVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLVSKGVD 436

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             ++    G         +        NRRI+  V
Sbjct: 437 ASKLVA-QGHGSENPVAENTTEEGRFKNRRIEFSV 470


>gi|330998481|ref|ZP_08322305.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329568587|gb|EGG50392.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 292

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 9/213 (4%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
               + ++  K S            +          +    +   +K     ++ K +  
Sbjct: 64  AEAQKANDELKASYAALQGSLDKSIQQNSQGNVNISKLVDEINASNKFIKQLVEAKDKSD 123

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S          L 
Sbjct: 124 SLNMVLTNNLTRSLSREEMKDVDVQVLKGVVYISLADNM---LYKSGSYEISERAGETLS 180

Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310
           KI +++    E  + I G+TD  P      R+NW LS  RA S  Q L    GV   R++
Sbjct: 181 KIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLT 240

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
              G   +    ++D       NRR  I++  +
Sbjct: 241 AA-GRGEYNPVASNDTPEGKMRNRRTQIIITPK 272


>gi|308274998|emb|CBX31597.1| hypothetical protein N47_E51090 [uncultured Desulfobacterium sp.]
          Length = 315

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 11/224 (4%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + +  +  +     L  S+  E  + ++  D+   +         +   + E      L 
Sbjct: 94  EAEVERLNQERNRILMESRSLEAKQANIKADASTKEANQAKMMAIEKAQQLEIKQQEALE 153

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           + K L + +++      +   +          +  +  + T  GI++++ D     +F  
Sbjct: 154 QMKKLELAKQESQAMSLEAEQARKKAAELKAEIDKLQAKQTDRGIVLTLGD----VLFAN 209

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           + +   P  +  + ++ E L    E + +  GHTD+         N  LS  RA +    
Sbjct: 210 NKANLQPGAMRTIDQLAEFLKKHAERMVVIEGHTDSR---GSDTYNLGLSQRRADAVRDA 266

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L+  G+ + RI  I G        ++D       NRR++I++ +
Sbjct: 267 LVARGIDQARIQTI-GKGEVYPVASNDTSAGRQQNRRVEIIISN 309


>gi|319783265|ref|YP_004142741.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169153|gb|ADV12691.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 216

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L       GV    +   I++++        F+       P    VL  +  V
Sbjct: 77  MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNSDQDAVKPGFYQVLNSVALV 133

Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L    +    + GHTD++      + N+ LS  RA +    L   GV + R   ++GF  
Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLSGQGVDQRRF-AVTGFGK 189

Query: 318 HRLKIASDPM--NSANRRIDILV 338
            R   ++      + NRR++I +
Sbjct: 190 TRPVASNATAEGRAQNRRVEIQL 212


>gi|94496613|ref|ZP_01303189.1| OmpA/MotB [Sphingomonas sp. SKA58]
 gi|94423973|gb|EAT08998.1| OmpA/MotB [Sphingomonas sp. SKA58]
          Length = 226

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 10/199 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
             N+  R   K         L   +  +        +++ + A         +   + + 
Sbjct: 25  DPNTGQRSISKAAIGGIGGALGGYLLGDLVGGRNDRTEKILGAGIGAVAGAGIGAYMDAQ 84

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              L  +    GV        +L+ +    +   F    +   P+    L  +  VLA  
Sbjct: 85  ERKLREETAGTGVDVIRDGDNLLLRM---PSGITFGYDRADVQPQFQPTLNDVASVLAQY 141

Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I + GHTD+         N  LS  RA +    L+  GV   RI    GF   +  
Sbjct: 142 PKTYIDVYGHTDSD---GSDAYNQTLSERRAQAVANYLVGRGVQSARIGT-RGFGETQPI 197

Query: 322 IASDPMN--SANRRIDILV 338
            ++      +ANRR++I +
Sbjct: 198 ASNATEEGKAANRRVEIKI 216


>gi|299145942|ref|ZP_07039010.1| OmpA family protein [Bacteroides sp. 3_1_23]
 gi|298516433|gb|EFI40314.1| OmpA family protein [Bacteroides sp. 3_1_23]
          Length = 297

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
              TK   + +      ++   R  +    L+ +Q++         D +   +   +   
Sbjct: 31  TDYTKLQTEYQESQLQLRENQARSTSLEERLAEAQRNNSELRKSLSDMQSILNKSLTQSS 90

Query: 164 EKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           + ++N  +       S   I  + K K R   L   + + L+  +    ++ +  +  + 
Sbjct: 91  QGNMNMGKLIDEINASNRFIQHLVKEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKG 150

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNI 280
            + IS+ D     ++   S     +   VL KI +++    +    + G+TD  P  R  
Sbjct: 151 VVYISLADNM---LYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTN 207

Query: 281 ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R+NW LS  RA S  Q L    G++  R++   G         +D     + NRR +I+
Sbjct: 208 IRNNWDLSALRASSVVQALQNVYGINPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEII 266

Query: 338 VEDR 341
           +  +
Sbjct: 267 ITPK 270


>gi|282858415|ref|ZP_06267595.1| OmpA family protein [Prevotella bivia JCVIHMP010]
 gi|282588863|gb|EFB93988.1| OmpA family protein [Prevotella bivia JCVIHMP010]
          Length = 287

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 14/215 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q    + S             S +       +    +   ++     ++ K +   L 
Sbjct: 58  EDQLTQARESAAALQGSLDKSLTSANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             + + L+  ++   +K V  +  +  + IS+ D     ++   S          L KI 
Sbjct: 118 MALQNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRAEQTLSKIA 174

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           ++++   +    I G+TD  P           R+NW LS  RA S  + L +  GV+  R
Sbjct: 175 KIISDYNDYDVLIEGNTDNVPINTANKMMTNIRNNWDLSALRATSVAKYLQEHFGVNPKR 234

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           I+   G   +   +A++       NRR  I++  +
Sbjct: 235 ITAG-GRGEYNPLVANNTELGRQRNRRTQIIITPK 268


>gi|323529927|ref|YP_004232079.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323386929|gb|ADX59019.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 321

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 14/281 (4%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           ++          + ++       N    +S      +     +    +   G      + 
Sbjct: 42  VDNSSMSIRTTALPSASSSAPALNTAGLASGTTGAGTGAVTASPPPANATPGQVVVGGKV 101

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                    L+  + +    N + +          +                   + KI 
Sbjct: 102 PDEATKAAVLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKID 161

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKG------VLFETTRTGILISIIDQRNTPMFD 238
             +   + +   +     L+  +A+ +         +    +  G+L   +  R    F+
Sbjct: 162 GTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIE-FE 220

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+   P+   +L ++   +   T     I GHTD          N  LS  RA +   
Sbjct: 221 TGSATLTPQGRAILDQMAAAMQKMTTKTVAIIGHTDN---SGNRASNIALSQARADAVKG 277

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            L+  GV   ++S  +G    +   ++D     + NRRI+ 
Sbjct: 278 YLVAKGVPPQQMST-TGVGPDQPIASNDTADGRARNRRIEF 317


>gi|226939690|ref|YP_002794763.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
 gi|226714616|gb|ACO73754.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
          Length = 225

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 12/155 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +     ++ S L   ++    +  L +     +++++ +      F+ +S++  P     
Sbjct: 78  MDRQKAELESKLRSEISSG--QMQLQQNADQSLVVTMNEDAT---FNLNSAVVKPAFYPT 132

Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           + K+ E L    +   + RG+TD++     A  N +LSL RA +    L+  GV+ +RI 
Sbjct: 133 MNKVAETLKQYNQTTLVIRGYTDST---GAAAYNQQLSLKRANAVKSYLVGQGVAANRIQ 189

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
            I G      + ++D     + NRR+ I +  +QG
Sbjct: 190 TI-GMGESDPRASNDTAQGRAMNRRVSITIVPQQG 223


>gi|108757918|ref|YP_632429.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108461798|gb|ABF86983.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 620

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 14/246 (5%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
            D+   E  T NS   + G  +    +Q                     +  D +   D 
Sbjct: 371 TDVCPTEPETFNSFQDEDGCPDDPNAHQPPTEAGQPAPAPAPLALPPAPVDTDKDGVVDS 430

Query: 158 CKSTDLEKS-INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                 E   ++  E+    P        +   +    L  +  + +             
Sbjct: 431 EDLCQTEPEDLDGFEDEDGCPDPDNDQDGIPDAEDQCPLEAETINGVQDDDGCPDKGKAQ 490

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDA 274
                  I+I      +   F     + L  +  +L+++   L  +    ++ + GHTD 
Sbjct: 491 VRVEGARIVI-----LDKVYFGTGQDVILARSHGLLRQVAATLKANPRILMVRVEGHTDD 545

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  LS  RA +    L+K G++  R+  + G+   +    ++       NR
Sbjct: 546 Q---GNDMKNLDLSQRRARNVVAFLVKEGIAAQRLDAV-GYGEAKPVDTNETAKGRENNR 601

Query: 333 RIDILV 338
           R++  +
Sbjct: 602 RVEFNI 607


>gi|118578992|ref|YP_900242.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501702|gb|ABK98184.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 224

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                   +           + +++    +  +FD             L K    L  S 
Sbjct: 81  QAAALKKNMPEAEVVRDGENVYVAL---PSGILFDTGKDELKTSAKESLAKAAATLKSSE 137

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I I+GHTD++      + N  LS  RA      L  +GV   R++ I G+   R  + 
Sbjct: 138 TNIIIQGHTDST---GSDKINQPLSQRRANQVRDFLAANGVPSSRMTAI-GYGSSRPAVP 193

Query: 324 SDPM--NSANRRIDILVEDRQ 342
           +D     + NRR+ + +   +
Sbjct: 194 NDTEVNRALNRRVQLEISPNE 214


>gi|255037862|ref|YP_003088483.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950618|gb|ACT95318.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 525

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 87/272 (31%), Gaps = 26/272 (9%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            K+       +     P    + + ++  +      + V +  G     K  + +E  I 
Sbjct: 277 FKDTEGKGDIVRYNLQPKPAPADSAVEAPVAVVPPSDPVVMISGKVIDSKTNKPVEATII 336

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
           Y   +   E    +    + + K +              N+     + +   +  ++K  
Sbjct: 337 YEDLTTGEEVGTATTNPTTGEYKLVLPYGQKYSMRAVAPNFIAEGENIDLTDSTGKEKSF 396

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +++A K    +       +                     N   F    +    E+   L
Sbjct: 397 KEIANKSLKLIPIEEGQIVR-------------------LNNIFFATGKATLREESFPEL 437

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +I   +  +    I + GHTD +     A  N  LS +RA +  + L+  G+  DRI+ 
Sbjct: 438 NRIAISMTENKTLAIELGGHTDNT---GSAEFNVNLSQERADTVREYLIGKGIEPDRIAS 494

Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             G+   +    +D       NRR++  +  +
Sbjct: 495 -KGYGETKPVATNDTPEGQQQNRRVEFKILKK 525


>gi|182678181|ref|YP_001832327.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634064|gb|ACB94838.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 459

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 12/277 (4%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQ---NKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
           ++   K +    KG+   +       Q   +   L     +T +     +      +  +
Sbjct: 189 YDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHKQILAEAKR 248

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
              N       +      +N  +        L +  D   ++   +         E+ +A
Sbjct: 249 LFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGGALYERAVA 308

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             R      L     +  S +      K V  ++ +  +   +   + T +F+ + +   
Sbjct: 309 AIRTNLADQLPAGYQTDTSAITVHPEDKAVDSKSCQAELDGLLG--KATILFETNGATIS 366

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +  +L +I   + H  E  I I GHTD++        N  LS  RA + +  L+ +G+
Sbjct: 367 KSSEGLLDRIVTTIGHCPEATIEISGHTDST---GNEPFNLALSERRAKAVFDYLVAAGI 423

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             D++S  +G+   R   ++D     + NRRI+  V+
Sbjct: 424 PADKLSA-TGYGSSRPVASNDTEEGRAKNRRIEFTVK 459


>gi|213855850|ref|ZP_03384090.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 172

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 65/166 (39%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK      +    R + + 
Sbjct: 66  PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQ 125

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
              S+ +      +      ++G  +       + + K  +  + P
Sbjct: 126 LIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEP 171



 Score = 40.3 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 1/105 (0%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             ++T  +                 +++       + +++     + RL  L   +   +
Sbjct: 68  ATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLI 127

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
                   +   +  +  + G+ I IID +N PMF   S+   P 
Sbjct: 128 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPY 172


>gi|260428759|ref|ZP_05782736.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
 gi|260419382|gb|EEX12635.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
          Length = 221

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V    T   +++++       +F   S+    +    ++ +G  L    
Sbjct: 87  EAELRQQLGNNVSINNTGDRLVVTMPQD---ILFPFDSAALRSDLQADIRTVGRSLLQYP 143

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                + GHTD+      A  N +LSL RA +   VL+  GV   RI  I G    +   
Sbjct: 144 NTTVQVLGHTDSD---GDAAYNQKLSLRRAQAVSSVLIAEGVPSSRIQSI-GRGEDQPIA 199

Query: 323 ASDPMNSA--NRRIDILVE 339
           ++        NRR++I++ 
Sbjct: 200 SNLTAEGKQQNRRVEIVIL 218


>gi|170723276|ref|YP_001750964.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169761279|gb|ACA74595.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 262

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 72/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D    +        + +    +   +   +     A
Sbjct: 39  QSDPQASKIAALETKDAQDWLNKADKAYMEREDSKKVDQLAYLTNQRVEVAKQTIALRSA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  ENELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  + K+ + L  + E    + G+TD+      A  N  LS  RA +    L+++GV
Sbjct: 155 SSALPNVTKLAQFLQENPERKVIVEGYTDSV---GSANYNQSLSERRAGAVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVA-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250


>gi|77457447|ref|YP_346952.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77381450|gb|ABA72963.1| putative outer membrane protein A precursor [Pseudomonas
           fluorescens Pf0-1]
          Length = 231

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F    +   P   +VL K+   L   +    +++ GHTD+         N +LS  RA+S
Sbjct: 127 FQFDKATLTPADKLVLDKVASRLKQESSTAQLTVTGHTDSV---GSDAYNQKLSDRRAHS 183

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L++SGV +     ++G    +    +      + NRR +I +  
Sbjct: 184 VVKYLVESGVPQSSFVSVTGAGESQPVADNKTADGRALNRRTEIKINR 231


>gi|326561460|gb|EGE11810.1| outer membrane protein CD [Moraxella catarrhalis 46P47B1]
 gi|326562231|gb|EGE12559.1| outer membrane protein CD [Moraxella catarrhalis 7169]
 gi|326567185|gb|EGE17307.1| outer membrane protein CD [Moraxella catarrhalis BC1]
 gi|326568467|gb|EGE18547.1| outer membrane protein CD [Moraxella catarrhalis BC7]
 gi|326572021|gb|EGE22023.1| outer membrane protein CD [Moraxella catarrhalis BC8]
 gi|326574959|gb|EGE24889.1| outer membrane protein CD [Moraxella catarrhalis 101P30B1]
          Length = 453

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
              AI+ Y          A K +         S     +L +      N      G    
Sbjct: 156 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
              +         L+  + +   + +         +      +            P    
Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239
           E+  A+     +      +   L       +   V        + L+  + Q     FD 
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             SI  P+    + K+   +        +I GH      R+ AR N RLS  RA +   +
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L    G++ +R++ + G+   R    +        NRR++ ++   +
Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440


>gi|237742042|ref|ZP_04572523.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
 gi|229429690|gb|EEO39902.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
          Length = 348

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +    DE    +R        +         VD +       ++ +         +  
Sbjct: 85  KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGI 144

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            + E    ++T + +          +E + +    Y     +       K K ++    K
Sbjct: 145 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 204

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                   L        +        I  +  +I   +  +FD       PE   VL+ +
Sbjct: 205 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 264

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  +  +   + GHTD+       + N  LS +RA +    L   G++ +    I G
Sbjct: 265 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 319

Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338
           +   R   ++D       NRR++I++
Sbjct: 320 YGESRPIASNDTPEGKQKNRRVEIVI 345


>gi|118419991|gb|ABK88265.1| outer membrane protein CD [Moraxella catarrhalis]
          Length = 427

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
              AI+ Y          A K +         S     +L +      N      G    
Sbjct: 130 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 189

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
              +         L+  + +   + +         +      +            P    
Sbjct: 190 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 248

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239
           E+  A+     +      +   L       +   V        + L+  + Q     FD 
Sbjct: 249 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 308

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             SI  P+    + K+   +        +I GH      R+ AR N RLS  RA +   +
Sbjct: 309 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 368

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L    G++ +R++ + G+   R    +        NRR++ ++   +
Sbjct: 369 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 414


>gi|311067881|ref|YP_003972804.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
 gi|310868398|gb|ADP31873.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
          Length = 262

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T   +        ++ +     E+        +E       ++ L+++ K++   +  
Sbjct: 60  GGTGVMDYSSVTPPESEQQGIDQLEDEKKKKKEKQEAADKTADQEELENVEKQVKQFIKD 119

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264
              +N    +  + T  G+LI+I D      FD   +    + I + ++I ++L  +   
Sbjct: 120 KKLEN---QLETKLTDEGLLITIKDS---IFFDSGKATIREQDIPLAEEISDLLVLNPPR 173

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            I I GHTD  P +N     NW LS+ RA +   +L+++   + ++    GF  ++    
Sbjct: 174 NIIISGHTDNMPIKNSQFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGFGEYKPVAT 233

Query: 324 SDPMNSA--NRRIDILVEDR 341
           +D       NRR+++L+  R
Sbjct: 234 NDTAEGRSKNRRVEVLILPR 253


>gi|307545103|ref|YP_003897582.1| OmpA/MotB [Halomonas elongata DSM 2581]
 gi|307217127|emb|CBV42397.1| OmpA/MotB [Halomonas elongata DSM 2581]
          Length = 270

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+        VL  +   L  +    + I GHTD+      A+ N  LS  RA S 
Sbjct: 168 FEFDSAQLTMGAESVLTDVASKLRANENVRVRIEGHTDSV---GPAQYNKDLSQRRADSV 224

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L   G++ +R++ I G+   +   ++D     + NRR+++
Sbjct: 225 ASFLASQGIAANRMTTI-GYGEEQPVASNDTKAGRAENRRVEL 266


>gi|238790287|ref|ZP_04634061.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
           ATCC 33641]
 gi|238721637|gb|EEQ13303.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
           ATCC 33641]
          Length = 241

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 4/200 (2%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
             NS +   +    +      +++ +        P    + +  K ++ +++L++ I   
Sbjct: 19  PSNSKSGGGKFSDSIDGQEQAKETKSNLAVEVPEPEQSLEDVVDKSRQEMEELSRIIMQI 78

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
            S     +    +  E    G+ I I D +   MF +SS++  P    +L ++       
Sbjct: 79  TSAY---DAQSNLHMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFSRLLGELAPAFNEM 135

Query: 263 TEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I I GHTDAS +R+    +NW LS +RA  A++ L+K G+++ R+ +I+   H  L 
Sbjct: 136 DNKIIITGHTDASRYRDQELYNNWNLSGERALMAHKALVKGGLADGRVLQINAMGHQMLL 195

Query: 322 IASDPMNSANRRIDILVEDR 341
             ++P+ + NRRI+I++  +
Sbjct: 196 HETEPLAAKNRRIEIMILTK 215


>gi|91224878|ref|ZP_01260138.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
 gi|91190424|gb|EAS76693.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
          Length = 330

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA S    L  +G+  DR+  + G         +        NRR++++V
Sbjct: 268 ERRAQSVADYLTAAGIGSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318


>gi|160880837|ref|YP_001559805.1| OmpA/MotB domain-containing protein [Clostridium phytofermentans
           ISDg]
 gi|160429503|gb|ABX43066.1| OmpA/MotB domain protein [Clostridium phytofermentans ISDg]
          Length = 275

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 15/227 (6%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             ++ +     LS+S       +S   D +         +            +  +  EK
Sbjct: 46  DQEKFDQVAASLSSSFSIFSGGHSSIGDGQLINMGVSQLNDFNQYFTNMGQTIDSVDGEK 105

Query: 183 ILAMKR------KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           I  +K+      K   + + + I+        D  +     +T    +LI+I     + +
Sbjct: 106 IDELKQLLTEANKAETEKMYENITEMSGQYNLDKYLDIETDKTGGQYVLINI---SGSLL 162

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYS 294
           +D   +    E + +  K+G++L         + GHTD  P    I R N  LS  RA +
Sbjct: 163 YDSGKAQLKSEALPIFSKVGDILKTYKGYRISVIGHTDNVPVTSGIYRSNKELSSARAIN 222

Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A + L+   G+    I  I G   +     +        NRRI+I +
Sbjct: 223 AAEYLIDVKGIDPSNIEWI-GRGEYDPIADNSSEAGRSKNRRIEIRI 268



 Score = 43.4 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          +K   ++       W   +AD M +L+ FF++++  +  D +    +    +        
Sbjct: 7  RKKKTEEASAGAPLWMNTFADLMNLLLCFFVLLFAFSNVDQEKFDQVAASLSSSFSIFSG 66

Query: 79 ASKGIFDEQ 87
              I D Q
Sbjct: 67 GHSSIGDGQ 75


>gi|86141364|ref|ZP_01059910.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
 gi|85831923|gb|EAQ50378.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
          Length = 276

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +     +         R   +   + ++L G + +   + +     +  + +SI D+ 
Sbjct: 92  EQMKEKDLQIKAFRDAMNRKDSVTLALVTSLKGAIGNLNDEDIEINVEKGVVYVSISDKL 151

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLD 290
              +F+            VL K+  V+ +  ++   + GHTD+ P       DNW LS+ 
Sbjct: 152 ---LFNSGRWDVTNRAKEVLGKVATVVKNKPDIEFMVEGHTDSQPISTSVIEDNWDLSVK 208

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA S  ++L +  GV  +R+    G +++    ++D     + NRR  I+V  +
Sbjct: 209 RATSVVRILQEEFGVPPERMVAA-GRSYYVPLASNDTAEGRARNRRTRIVVLPK 261


>gi|115376920|ref|ZP_01464141.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825376|ref|YP_003957734.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115366099|gb|EAU65113.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398448|gb|ADO75907.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 374

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 98/282 (34%), Gaps = 11/282 (3%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            K  + +            +      +   E  +Q +   +  +   +  ++ +      
Sbjct: 87  RKAQLAEAQASIAVAQHQRAVAAQALRQTQE--AQRRQSQAQLDAAQRQLLEARRLRDEA 144

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
            +  +        +   Q+++  +  + R +++ +   ++    + + + E         
Sbjct: 145 AQLAEARRLQSQTVQLQQEAQRRQEEMDRLAQEQRQRSEAETQAQRLAQAEQALEVERRA 204

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                 +  +  +  A+  +   + L        +       G ++++     + +F   
Sbjct: 205 RAEAETRAAEEREARARAEAQAATALAGLARQGELKVSEDARGTVLTL---SGSVLFASG 261

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
               LP     L ++ E L  +   ++I GHTDA       R N  LS  RA      L+
Sbjct: 262 EDDLLPSARSKLSEVAEALKPTHNRLTIEGHTDAQ---GADRFNEDLSFRRAERVRNFLV 318

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             GV+ +R+ ++ G   +R   ++        NRR++I+++ 
Sbjct: 319 SQGVAANRV-EVRGLGEYRPVASNSTAEGRANNRRVEIILQR 359


>gi|104780902|ref|YP_607400.1| outer membrane protein OprF [Pseudomonas entomophila L48]
 gi|95109889|emb|CAK14594.1| outer membrane protein OprF [Pseudomonas entomophila L48]
          Length = 346

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 217 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTTVEGHT 276

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +   VL +  GV   R+S + G+   R    +       
Sbjct: 277 DSV---GPDAYNQKLSERRAKAVKDVLTQQYGVESGRVSSV-GYGETRPVADNATEAGRA 332

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 333 VNRRVEAQVEA 343


>gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
 gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
          Length = 327

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + ++  F   S     E+   L K+   L    +  + I GHTDA+     A  N  LS 
Sbjct: 212 RLDSSSFAFDSVSLNQESKQQLTKLVRFLNQYPQAKVVITGHTDAT---GPAAYNQTLSE 268

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA +    L++ G+   RI    G        ++        NRR+DI +
Sbjct: 269 KRAKAVADALVEQGIQRSRI-TWRGEGETNPIASNSTAEGRELNRRVDITI 318


>gi|42521782|ref|NP_967162.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
 gi|39574312|emb|CAE77816.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
          Length = 249

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++   +  +L   +     K  + +     + + I     +  F + S+   PE +  L 
Sbjct: 94  EVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIA-LAASTFFQEGSAKLKPEALKSLD 152

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311
           K+ +VL    + I I GHTD  P        NW L+  RA +  + L+K   +   R   
Sbjct: 153 KVADVLKTHKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVS 212

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +S +   +  + +D     + NRRI+I +   
Sbjct: 213 LS-YGDQKPVVPNDSDEHRAMNRRIEIFIVTD 243



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 1/97 (1%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KK    ++  N+   W + YADF+T+L AFF+VM+  + ++++ +K  E         
Sbjct: 1   MAKKHRKHEEHENH-ERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHL 59

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +                        +  +      V+
Sbjct: 60  VGRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVE 96


>gi|254787924|ref|YP_003075353.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
 gi|237683974|gb|ACR11238.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
          Length = 304

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 95/259 (36%), Gaps = 13/259 (5%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +     +  +      +   K+   L+    +    Y+              +       
Sbjct: 42  SVVSSQNLEEYAPVAFDEAGKSIARLETLENDGADDYELEHQQYLAERKLDTAIELAKHN 101

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                      +  DL     + +       +       +  ++  ++A   ++++    
Sbjct: 102 RSQEYIDDADVRRKDLMLQARERDLTQAEREAAFMKSRAEAAEQRAEMAVARANSMEEKA 161

Query: 208 ADNIV--KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +      + V  +  + G++I++ D     +F    S   P  +  L+K+ ++LA   + 
Sbjct: 162 SQMASKLESVTTKLDKRGLVITMGD----ILFATDESEVKPGAVRTLEKVSDLLAEYPDR 217

Query: 266 -ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            I + G TD++     A  N  LS  RA +  + L+ +G++EDR+S   G+       ++
Sbjct: 218 EILVEGFTDST---GAADYNKNLSERRAEAVVKQLVDNGLAEDRLSA-KGYGEEYPVASN 273

Query: 325 DPMNSA--NRRIDILVEDR 341
           D       NRR++++V ++
Sbjct: 274 DTAAGRQQNRRVELVVANK 292


>gi|254251112|ref|ZP_04944430.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
 gi|124893721|gb|EAY67601.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
          Length = 431

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 8/168 (4%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               + E  +    ++RL    +++   LS L+ D I +GVL         I +   +  
Sbjct: 268 TERHALEARILEIGRERLASAPQRLR--LSQLLRDEIARGVLTVDEDERRSIVVF--KGD 323

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293
            MF    S  LP    +L K+   +A     + + GHTD  P R+ A  +N  LS  RA 
Sbjct: 324 SMFASGQSTVLPGIEPILDKVAREVARVGGTVLVTGHTDNQPIRSAAFANNLALSEKRAA 383

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              Q+L + G   +RI  + G    +    +        NRR++I+V 
Sbjct: 384 YVAQILQRDGTPAERIRAV-GKGDTQPVGDNATAAGRALNRRVEIMVT 430


>gi|269836612|ref|YP_003318840.1| OmpA/MotB domain-containing protein [Sphaerobacter thermophilus DSM
           20745]
 gi|269785875|gb|ACZ38018.1| OmpA/MotB domain protein [Sphaerobacter thermophilus DSM 20745]
          Length = 233

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 8/174 (4%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +   P       LA +  + +  LA +          D  +     E T+ GI+I + + 
Sbjct: 60  DVMEPGQPLGPALAEQDFRFMSFLAIRAQIASLVQRYDLGLDAADVELTQEGIVIHLAES 119

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
               +F        PE   VL  I  ++      + + GHTD  P  N    DNW LS  
Sbjct: 120 ---VLFPPGEVQLRPEAHRVLADIAAIIGPMPFPVRVEGHTDNVPPANPNYPDNWALSTM 176

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           RA S  + L    GV  +R+  + G+A HR +  +  +     NRR+D+++   
Sbjct: 177 RAVSTVRFLSDVQGVPAERLVAV-GYAEHRPRADNRTLEGRRKNRRVDLVIVQP 229



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          ++        +   W + YAD +T+L+ FF+VM+ I+  D    +          +  + 
Sbjct: 3  RRRHEHAGEASSERWLVTYADLITLLLVFFVVMYSISKADSAKFQRFSTSVQQAFRVDVM 62

Query: 79 ASKGIFDE 86
                  
Sbjct: 63 EPGQPLGP 70


>gi|303240000|ref|ZP_07326522.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
 gi|302592479|gb|EFL62205.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
          Length = 261

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 11/195 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           + +    + +   ++     E N      S        ++K + +  +++ + +SGL  D
Sbjct: 74  NGKDIVSIFEENMVDDIDTNETNNESKSGSNADYDTENKQKAITEFKEEVQALISGLKID 133

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
              + V     +T +++ I    +  +FD   +         L+K+GE++      I++ 
Sbjct: 134 ---EYVHVVDVKTSVILRI---DSAILFDVGKADIKESGKDTLKKVGELMDKLNTNIAVM 187

Query: 270 GHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P        NW LS  RA +    L+    ++  +++  +G    R    +D  
Sbjct: 188 GHTDNIPINTSLFPSNWELSTRRATNVVVFLVNECNLNPTKLTA-TGNGEFRPIAPNDSE 246

Query: 328 --NSANRRIDILVED 340
                NRR+DI+++ 
Sbjct: 247 ENRQKNRRVDIVIDK 261


>gi|86134567|ref|ZP_01053149.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85821430|gb|EAQ42577.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 283

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 10/246 (4%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
            +EH       LK+ ++ QK   ++ + +    + S+Q ++ +       ++ ++L   T
Sbjct: 29  QEEHAQAKDELLKVETSLQKCLIEKEKQDTKVFALSEQVKYLQEDKKTALKQVENLTVLT 88

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK-GVLFETT 220
                  K     L    K      K   +   L   I   L+  +AD I    +     
Sbjct: 89  QSSSDNIKNVISQLSEKDKYINGVRKAMTQKDSLNLAIKYHLTRNLADGIQDKDIEVNVE 148

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279
           +T + ISI D+    +F   S         VL KI +V+    ++ + I GHTD +P + 
Sbjct: 149 KTVVFISISDKL---LFKSGSYNVTENAYTVLDKIAKVIKDQPKMEVMIEGHTDTTPIKR 205

Query: 280 IA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
              +DNW LS  RA S  ++L  K GV  +R+    G + +     +D     + NRR  
Sbjct: 206 DLIQDNWDLSALRATSITRILQYKFGVKPERLIAA-GRSQYIPLAPNDTAENKAKNRRTK 264

Query: 336 ILVEDR 341
           I++  +
Sbjct: 265 IIIMPK 270


>gi|315224547|ref|ZP_07866374.1| OmpA family protein [Capnocytophaga ochracea F0287]
 gi|314945568|gb|EFS97590.1| OmpA family protein [Capnocytophaga ochracea F0287]
          Length = 230

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 7/142 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  +      FD +      ++   L K+  +L    
Sbjct: 80  QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNKSRQTLDKLSAILKEYP 139

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  + + GHTD          N  LS  RA +        G++  R +    +       
Sbjct: 140 DTNVIVAGHTDNV---GKDEYNLGLSQRRAQAVTNYFKSKGLAGSRFTT-KWYGERNPVA 195

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
           +++     + NRR+++++   +
Sbjct: 196 SNETADGRAKNRRVNVVIVPNE 217


>gi|163735541|ref|ZP_02142973.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149]
 gi|161391161|gb|EDQ15498.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149]
          Length = 279

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 57/332 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   +IIKKK  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +  +  Y
Sbjct: 4   QSNLAPVIIKKKKKVVGGGHHGGAWKVAYADFVTAMMAFFMMMWLLNATTEQQRAGLADY 63

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F P                 P  R S         + I       + G            
Sbjct: 64  FAPTI---------------PINRISGGGDGAFGGDSIFSEETLPQNG------------ 96

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                              T      K          S   E++     L       M R
Sbjct: 97  ----------------LGATSQHATRKKAASGESGNDSDGGEQDSSDEELQALIEELMGR 140

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                 +   +   ++ +  +              ++I +      P+F  +S  P P  
Sbjct: 141 GGESTVMENALEHIVTRITDEG-------------LVIELFALDGQPLFQPNSDDPTPLM 187

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++ +  V   +T  I+I  H  + P        W +S DRA     +L ++G+  +R
Sbjct: 188 TQLVELVASVAFAATNNIAIGAHVPSRPIVVAQNPVWDVSTDRATRTRLMLQENGLEPER 247

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + +++G A       + PM + N R++I++  
Sbjct: 248 MHRVTGHADREPVHLN-PMATRNSRVEIVLLR 278


>gi|84685261|ref|ZP_01013160.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666993|gb|EAQ13464.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
          Length = 225

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 10/148 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++      L +      +    T + + + +       +F   S+   P     L+ + 
Sbjct: 84  NQLDKQAGDLRSSLSNSSIQVINTGSYLKVVM---PQGILFPTDSADVSPALYPDLRALA 140

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           E L         + GHTD +     A  N  LS  RA +   V+  +GV   R+  + G 
Sbjct: 141 ENLREYPNSSVQVVGHTDNT---GQASYNLTLSQRRAQAVLGVIQSNGVGAARLQAV-GK 196

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341
                   +      + NRR+++L+  R
Sbjct: 197 GDSEPVATNLTPEGRAQNRRVEVLIIPR 224


>gi|237741116|ref|ZP_04571597.1| outer membrane protein [Fusobacterium sp. 4_1_13]
 gi|229430648|gb|EEO40860.1| outer membrane protein [Fusobacterium sp. 4_1_13]
          Length = 144

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V    +     ++I+    +  FD   S   P+   +L+ I E +  +   I+I+GHT
Sbjct: 4   KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIQGHT 63

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L++ G++EDRI  I      +    ++     + 
Sbjct: 64  DSI---GSNAYNFKLSRRRAESVKAKLLEFGLAEDRIVGIEAMGEEQPIATNETKEGRAQ 120

Query: 331 NRRIDILVEDRQ 342
           NRR++  +  R+
Sbjct: 121 NRRVEFKLVQRE 132


>gi|327403673|ref|YP_004344511.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319181|gb|AEA43673.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 223

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S   P +   L  + E++    E+   I GHTD+       + N +LS  RA S 
Sbjct: 122 FETGKSDLKPISYGALNNLVEIMKRKKEIKIQIDGHTDSD---GDNQANQQLSQKRAESV 178

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
              L+  G+   R+    G    +    ++     + NRR +I + 
Sbjct: 179 RNYLISKGIDATRVKA-KGNGESKPIADNNTAQGKAQNRRTEITIL 223


>gi|300727657|ref|ZP_07061045.1| OmpA family protein [Prevotella bryantii B14]
 gi|299775083|gb|EFI71687.1| OmpA family protein [Prevotella bryantii B14]
          Length = 286

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 14/165 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   +++ L+  ++ + +K V  +  +  + IS+ D     ++   S     
Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSKDEMKEVDVQVLKGVVYISLADNM---LYKSGSYEVND 165

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD------NWRLSLDRAYSAYQVL 299
                L KI +++    +    I G+TD  P    A        NW LS  RA S  Q L
Sbjct: 166 RAEQTLSKIAKIIKDYKDYDVLIEGNTDNVPVNTKAVSMKNIRNNWDLSALRASSVVQYL 225

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
               G++  R++   G   +     +D       NRR  I++  +
Sbjct: 226 QDHYGINPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIITPK 269


>gi|189475074|gb|ACE00211.1| OmpA [Vibrio alginolyticus]
          Length = 330

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  T  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA S    L  +G+  DR+  + G         +        NRR++++V
Sbjct: 268 ERRAQSVADYLTAAGIGSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318


>gi|285017363|ref|YP_003375074.1| ompa family outer membrane protein precursor [Xanthomonas
           albilineans GPE PC73]
 gi|283472581|emb|CBA15086.1| putative ompa family outer membrane protein precursor [Xanthomonas
           albilineans]
          Length = 366

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 16/231 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                   + +I   +         +       +         +   I        P   
Sbjct: 143 GAGLQTTFDKHIAVRAEVAYRADFDDKSVAAPSRNWFGDALASVGVVIPLGPAPSAPVPP 202

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                         D    +++           + V  +     + I +        FD 
Sbjct: 203 PPPPPVAPSCADKDDDGDGVNNCDDKCPDSKPGQTVGPDGCPVPVSIDLKGVN----FDF 258

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           + S   P+ I +L +   +L    +  + + GHTD+       + N +LS  RA   Y  
Sbjct: 259 NKSTLRPDAIGLLNEAVGILNSYPDLKVQVAGHTDSI---GSDKYNQKLSERRARVVYDY 315

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341
           L+K GV   R+    G+   R    +            + NRR ++ VE++
Sbjct: 316 LVKHGVDASRLDGPIGYGKTRPIAPNTNPDGSDNPEGRAKNRRTELNVENK 366


>gi|114321978|ref|YP_743661.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228372|gb|ABI58171.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 362

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 90/257 (35%), Gaps = 21/257 (8%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              + +++  +    +                + +            E+   + +     
Sbjct: 107 EAQQAALEDSLADQEEALDEAAARRAELRDRLAGREADLARERALTDEQAARIDRLHRQI 166

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            ++ ++       L   +  A  ++  ++DL ++++  L+  V +       F      +
Sbjct: 167 IALREQLTALSEALDLSEATAAAQRAEIRDLGQRLNLALAERVQELARYRSEFFGRLREV 226

Query: 225 L-----ISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVIS 267
           L     I I   R    +  +F  +S+    E    L+ +   L             V+ 
Sbjct: 227 LGDHPDIRIEGDRFLFQSELLFATASADLGGEGREQLEGLATTLHELRGRIPDDLDWVLQ 286

Query: 268 IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           + GHTD  P R      NW LS  RA +  + LM  G+  +R+   +GFA +      D 
Sbjct: 287 VEGHTDRRPIRTAEFPSNWELSTARAQTIVRYLMDQGIPPERL-AAAGFAEYHPVDDRDT 345

Query: 327 --MNSANRRIDILVEDR 341
               + NRRI++ + +R
Sbjct: 346 PEAWARNRRIELRLTNR 362


>gi|228471996|ref|ZP_04056764.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228276608|gb|EEK15321.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 278

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + +  +  +  + +SI D+    +F   S    P    
Sbjct: 109 RRDSINLALVQSLKGVLGNLDDEDITVQVDKGVVYVSISDKM---LFSSGSYNVTPRARE 165

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307
           VL K+ +V+ +  +    + GHTD  P +N   +DNW LS+ RA +  ++L    GV+  
Sbjct: 166 VLGKVAKVVNNKPDFEFMVEGHTDNVPIKNTCIKDNWDLSVLRATAVVRILQNDFGVTAS 225

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G   +    ++      + NRR  I+V  +
Sbjct: 226 RMTAA-GRGEYVPVTSNASADGRALNRRTRIVVLPK 260


>gi|159025750|emb|CAO02049.1| outer membrane protein A [Bordetella holmesii]
          Length = 177

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S+  PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 70  FFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSI---GTEAYNLKLSDRRAAS 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +    +      + NRR++I +   +
Sbjct: 127 VKAYLVSKGIDPNRIYT-EGKGEAQPIATNKTAEGRARNRRVEIEIVGSR 175


>gi|221638712|ref|YP_002524974.1| hypothetical protein RSKD131_0613 [Rhodobacter sphaeroides KD131]
 gi|221159493|gb|ACM00473.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
          Length = 525

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 16/241 (6%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           + G   +  +   L N       +Q           +++   +  +   L   +N     
Sbjct: 288 REGEGAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQ 347

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 +   L    + RL+   K ++   S        + VL       ++       +
Sbjct: 348 VASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSS 405

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARD 283
             +F+  S+   PE    +  + + L             +I + GHTD  P       RD
Sbjct: 406 EVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRD 465

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           NW LS  RA S  + + +S G    R+   +GF  +R     D     + NRRI++ + +
Sbjct: 466 NWELSSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSADARAQNRRIELKLTE 524

Query: 341 R 341
           R
Sbjct: 525 R 525


>gi|209550136|ref|YP_002282053.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535892|gb|ACI55827.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 221

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     G+        I++++        FD       P     L  + 
Sbjct: 78  NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215


>gi|170741264|ref|YP_001769919.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168195538|gb|ACA17485.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 337

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 109/326 (33%), Gaps = 27/326 (8%)

Query: 37  YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           Y D +T L+   + +  I  T               G++ +         +     + + 
Sbjct: 18  YVDALTTLLLSVVFLLTIFVTG-----QFFLSQEISGRDTVLGRLNRQIAELTDLLALER 72

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
               +++E       +L+   T +++    L  +      +        +    + +   
Sbjct: 73  SGRRTLEETAASLRANLQESETERRRLQDALSADQGAQGKASDLGRQLEAEKGATNRALS 132

Query: 157 LCKSTDLEKSINKEENYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
             +  + + +  +++   L       +    + + R+ DL  +++  L+  V +      
Sbjct: 133 QVELLNQQIAAMRQQLAALEDALAASETRDRESQARIADLGSRLNVALAQRVQELARYRS 192

Query: 216 LFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL------- 259
            F      IL +  D R         +  +F    +   PE    L +I   +       
Sbjct: 193 DFFGRLRQILGNRSDIRIVGDRFVLQSEVLFAAGQATLRPEAGAELDRIAVAIIELGRQI 252

Query: 260 -AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                 V+ + GHTDA P  +     NW LS  R+ +  Q ++  G+   R+   + F  
Sbjct: 253 PPDIPWVLRVDGHTDARPISSATFPSNWALSAARSIAVVQYMVGRGIPPQRLLAGA-FGE 311

Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341
            +           + NRRI++ + +R
Sbjct: 312 FQPLDTGTTEEAYARNRRIELKLTER 337


>gi|325105320|ref|YP_004274974.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974168|gb|ADY53152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 278

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 10/176 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +  L    +      +  ++  + +  + + L   +     KG+  E     + +S+ D+
Sbjct: 98  SEDLKRREQRLKEVEEMIRKRDEASNALKNKLQKALLGFQDKGLTVEMRDGKVYVSLTDK 157

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR--NIARDNWRLS 288
               +F   S +        L ++  +L    E+   + GHTD          +DNW LS
Sbjct: 158 L---LFASGSIVIDERGKQALHELAVILNTQPEINIAVEGHTDNQRVVNLGQIKDNWDLS 214

Query: 289 LDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           + RA S  + L +   +S +RI   +G    +     +   S   NRRI+I++  +
Sbjct: 215 VLRATSVVRFLTVDEKISPNRIMA-TGKGEFQPISTDNSAESRSKNRRIEIVLSPK 269


>gi|332877182|ref|ZP_08444932.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684925|gb|EGJ57772.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 284

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 9/213 (4%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
               + +E  K S            +          +    +   +K     ++ K +  
Sbjct: 56  AEAQKANEELKASYAALQGSLDKSIQQNSQGNVNISKLVDEINASNKFIKQLVEAKDKSD 115

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S          L 
Sbjct: 116 SLNMVLTNNLTRSLSREEMKDVDIQVLKGVVYISLADNM---LYKSGSYEISERAGETLS 172

Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310
           KI +++    E  + I G+TD  P      R+NW LS  RA S  Q L    GV   R++
Sbjct: 173 KIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLT 232

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
              G   +    ++D       NRR  I++  +
Sbjct: 233 AA-GRGEYNPVASNDTPEGKMRNRRTQIIITPK 264


>gi|254494341|ref|ZP_05107512.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|226513381|gb|EEH62726.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
          Length = 216

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  +     I + + +      F   S+         L    +
Sbjct: 67  YMDYQEQRLRQNLADTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 123

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS  RA +    L   GV+  R+  + G+ 
Sbjct: 124 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 179

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
            H    ++      + NRR++IL+   Q
Sbjct: 180 SHMPVASNATVEGRAQNRRVEILINPDQ 207


>gi|50956536|gb|AAT90783.1| conserved hypothetical protein [uncultured proteobacterium QS1]
          Length = 575

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 11/207 (5%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
             ++ D  +   +  +   ++         +  L ++ +      ++ + L+  +     
Sbjct: 350 RQISDDLRRYTAIPVAERRDQPQFTLREDAVAVLRQDAMRLDAYYRQGEPLSLGLGLYRG 409

Query: 205 GLVADNIVKGVLFETTRTGILI-----SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            L+   ++  +        + I     S +   +  +F   S+   P +  VL      +
Sbjct: 410 ELLRQPLLATIADHRQPPELPILAKIPSPVRLDSLSLFAPGSAELKPGSTKVLIAALVNI 469

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 + +  GHTD          N  LS  RA S    + + G   D    + GF  +
Sbjct: 470 KAQPGWLIVIAGHTD---VTGSPEQNLELSRARAASVRDWMQRMGDIPDSCFAVQGFGAN 526

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++D     +ANRR+DI +    G
Sbjct: 527 QPVASNDTEVGRAANRRVDIRLVPEVG 553


>gi|256827978|ref|YP_003156706.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256577154|gb|ACU88290.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 223

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 16/152 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + + +    +   LS        + V        + +++        F   S + LP   
Sbjct: 76  RMMDNQEADMRQALSQ------SEEVAVRREGDLLALTLKGDVT---FAVDSDVVLPGLY 126

Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++I +VL    +   +  GHTD++        N  LS  RA+S  ++L++ GV+  R
Sbjct: 127 TEIERIAQVLVKYPQTTIVVEGHTDST---GSDTYNQALSERRAWSVQRLLVERGVNPSR 183

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           I+ + G+   R    +D       NRR++I V
Sbjct: 184 ITAM-GYGESRPVATNDTPEGRQMNRRVEIRV 214


>gi|77919971|ref|YP_357786.1| outer membrane protein/peptidoglycan-associated (lipo)proteins
           [Pelobacter carbinolicus DSM 2380]
 gi|77546054|gb|ABA89616.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Pelobacter carbinolicus DSM 2380]
          Length = 427

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 82/282 (29%), Gaps = 15/282 (5%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF      L    + +F   +P      +     +       +  +    T+Q       
Sbjct: 144 YFFTDSLALRGDLRHVFAFGDPENNFIYSAGLTYLFGSQQPATPRVVPKDTDQDGIIDAN 203

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
           +      + +   +      +          K      S+  ++         + +  + 
Sbjct: 204 DACPDTPAGAPVDKLGCPLDSDKDGVPDYRDKCPGTPDSVAVDQQGCALDKDGDGVADIH 263

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKS 240
            +         + +      AD        +         ++DQ+  P+       FD  
Sbjct: 264 DRCPDTPADTPVDTEGCMGDADKDGVADQMDKCPGTPAGLMVDQQGCPISLTLAIEFDVD 323

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            +   P     L++  + +    E    I GHTD++        N  LS  RA S    +
Sbjct: 324 KADIKPRYHSELKRGADFIRKYPESRILIAGHTDST---ASDAYNLALSQRRADSVRNYV 380

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + + G+  +R+    G+        +        NRR+++ V
Sbjct: 381 ISNFGIKAERLEA-KGYGEAFPIADNATVQGRQRNRRVELSV 421


>gi|6045178|dbj|BAA85317.1| MotB protein, partial [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 176

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 65/166 (39%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                +T    I + ++P      +      +     N  +LK      +    R + + 
Sbjct: 66  PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQ 125

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
              S+ +      +      ++G  +       + + K  +  + P
Sbjct: 126 LIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEP 171



 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 1/107 (0%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             ++T  +                 +++       + +++     + RL  L   +   +
Sbjct: 68  ATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLI 127

Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                   +   +  +  + G+ I IID +N PMF   S+   P   
Sbjct: 128 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMR 174


>gi|332533226|ref|ZP_08409093.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037305|gb|EGI73760.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 210

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +         +    GV        + + +        F    S         L  I 
Sbjct: 67  NYMDKQEEAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFNDTLDAIA 123

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +V+       +SI GHTD++        N  LS +RA S    L+   +  +R+S + G+
Sbjct: 124 KVMNKYEKTYLSIEGHTDST---GKDSYNMNLSRERAQSVKNYLVNQQIMAERVSTM-GY 179

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              R    +D     + NRR++I +
Sbjct: 180 GETRPIATNDSANGRAQNRRVEIQI 204


>gi|326576289|gb|EGE26204.1| outer membrane protein CD [Moraxella catarrhalis CO72]
          Length = 453

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
              AI+ Y          A K +         S     +L +      N      G    
Sbjct: 156 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
              +         L+  + +   + +         +      +            P    
Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239
           E+  A+     +      +   L       +   V        + L+  + Q     FD 
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNAVVDPRGCPVQVNLVEELRQELRVFFDY 334

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             SI  P+    + K+   +        +I GH      R+ AR N RLS  RA +   +
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L    G++ +R++ + G+   R    +        NRR++ ++   +
Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440


>gi|304398526|ref|ZP_07380399.1| OmpA/MotB domain protein [Pantoea sp. aB]
 gi|304354031|gb|EFM18405.1| OmpA/MotB domain protein [Pantoea sp. aB]
          Length = 570

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 22/301 (7%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++W +          +             + +    +    +    +   LS        
Sbjct: 252 MLWGMGPI-------LAGSLATSVWTAWLSHRTAMQQVAGWQPIGSDSTILSPFPDFVLP 304

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            +    G T++ + ++         + +       N+         D+ +   +    + 
Sbjct: 305 LLPEGEGLTSRGRSWRCALGIFTLAATAALLSSGWNNRQLLQRVSFDIARYDRIPMQDSG 364

Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKG-----VLFETT 220
            +   +  L  +       A         L       L   V D I              
Sbjct: 365 PKASAVATLRDDATELDGWARNGVPARMSLGLYQGERLRMPVLDAIRSYEPPSLPPEPQP 424

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279
               +  I+   +  +FD   ++    +  +L      +       I + GHTD +    
Sbjct: 425 IPQPVTKIVRLDSMSLFDSGKAVLKTGSTRMLVNSLVGIKAKPGWLIVVSGHTDNT---G 481

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             + N  LSL RA +    +  +G   +    + G+   R    +D     + NRR++I 
Sbjct: 482 NPQLNQTLSLRRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPAGRALNRRVEIS 541

Query: 338 V 338
           +
Sbjct: 542 L 542


>gi|34763981|ref|ZP_00144872.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886240|gb|EAA23525.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 315

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 88/276 (31%), Gaps = 20/276 (7%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
              +      +     G     N     +         +++ + +        +    Y+
Sbjct: 54  AGQYTDEKVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGVYK 113

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             +N++    N + + +    +T ++        +   +  + + +      ++      
Sbjct: 114 DEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGKTT 173

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K L+   K     +   V       +L                +  +FD       
Sbjct: 174 EVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITL------------DSGILFDVDKYDLR 221

Query: 246 PETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           PE   VL+ +  VL  +  +   + GHTD+       + N  LS +RA +    L   G+
Sbjct: 222 PEAEEVLKNLAIVLKEADIKAFEVDGHTDSD---ASDKHNRILSENRANAVKNFLTSQGI 278

Query: 305 SEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           + +    I G+   R   ++D       NRR++I++
Sbjct: 279 TAE--ITIKGYGESRPIASNDTAEGKQKNRRVEIII 312


>gi|260174718|ref|ZP_05761130.1| OmpA/MotB domain protein [Bacteroides sp. D2]
 gi|315922978|ref|ZP_07919218.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696853|gb|EFS33688.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 297

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
              TK   + +      ++   R  +    L+ +Q++         D +   +   +   
Sbjct: 31  TDYTKLQTEYQESQLQLRENQARSTSLEERLAEAQRNNSELRKSLSDMQSILNKSLTQSS 90

Query: 164 EKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           + ++N  +       S   I  + K K R   L   + + L+  +    ++ +  +  + 
Sbjct: 91  QGNMNMGKLIDEINASNRFIQHLVKEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKG 150

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNI 280
            + IS+ D     ++   S     +   VL KI +++    +    + G+TD  P  R  
Sbjct: 151 VVYISLADNM---LYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTN 207

Query: 281 ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R+NW LS  RA S  Q L    G++  R++   G         +D     + NRR +I+
Sbjct: 208 IRNNWDLSALRASSVVQALQNIYGINPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEII 266

Query: 338 VEDR 341
           +  +
Sbjct: 267 ITPK 270


>gi|302338088|ref|YP_003803294.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301635273|gb|ADK80700.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 242

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
           R + L +     +S    +   + V  +    G++I++        F  +S+     E+ 
Sbjct: 87  RGRALDEARRKAISQFEPEIKSQKVRVQQDERGLIITLASD---AFFKPASAEVQIEESR 143

Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             LQK+  +L         I GHTD++P         NW LS DRA +    L+  GV+E
Sbjct: 144 ETLQKLSALLRSMPGRKFRIEGHTDSTPTDPTGPWPTNWELSTDRATNVLHYLVDFGVTE 203

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           ++  +++GFA      +         NRR+DI++   
Sbjct: 204 NQF-QVAGFADTVPLASESTEEGKAYNRRVDIIILSD 239



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS---KG 82
            P    +W   Y D +T+L+ FF++++  +  DD     I   F+  G      +     
Sbjct: 12  CPTGSPAWMNTYGDMVTLLLTFFVMLYTTSTPDDSKMNLILAAFSGLGMYTGGQTLQEGK 71

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
           + +  N            ++DE   K     +    +QK + Q+ E  +     S     
Sbjct: 72  LAELGNMIMSLPSTNRGRALDEARRKAISQFEPEIKSQKVRVQQDERGLIITLASDAFFK 131

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
             ++  +  E  + L K + L +S+   +
Sbjct: 132 PASAEVQIEESRETLQKLSALLRSMPGRK 160


>gi|297568668|ref|YP_003690012.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924583|gb|ADH85393.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 288

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +     +   LQ I  +L    +  + I+GHTD+      A  N +LS  RA S
Sbjct: 185 LFDYDRATLQQASSKQLQGIVTLLHDHPDLRLEIQGHTDSD---GSAAYNLQLSQRRAES 241

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
               L+  G+   R+    G+        +D     + NRR++++
Sbjct: 242 VLNYLLLFGIDPSRLKS-KGYGETMPVAPNDTAENKAKNRRVELV 285


>gi|254508437|ref|ZP_05120557.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
 gi|219548647|gb|EED25652.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
          Length = 323

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            +  F+ +SS   PE+   L ++   +    +  + + G+TD++     A  N +LS  R
Sbjct: 211 GSGNFELNSSKLKPESTQKLNELVAFMNQYPQSTVEVVGYTDST---GAAAYNQKLSEKR 267

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +    L   G+   RI  +SG   +    +++       NRR+++ V
Sbjct: 268 AQAVANELEAQGIDASRI-TVSGQGENNPVASNETKEGRMMNRRVEMTV 315


>gi|70729258|ref|YP_258995.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
 gi|68343557|gb|AAY91163.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
 gi|154759407|gb|ABS85198.1| major outer membrane porin [Pseudomonas fluorescens]
          Length = 325

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            QVL+   GV  +R+  + G+   R    +        NRR++  VE 
Sbjct: 276 KQVLVNQYGVGANRVQSV-GYGESRPVADNATEAGRAVNRRVEASVEA 322


>gi|256425383|ref|YP_003126036.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256040291|gb|ACU63835.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 449

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           I D      F+ + S     +   L ++ E+L      + + GHTD       A  N  L
Sbjct: 340 IKDAIQNLEFEFAKSSIKASSYPSLDRVAEMLRTKGFSLKLGGHTDNV---GNATKNMAL 396

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S DRA S  Q L++ G +  +I  + G+  ++   ++        NRR++  +
Sbjct: 397 SKDRAESVKQYLVEHGANPSKIEAV-GYGANQPIASNKTAAGRQKNRRVEFTI 448


>gi|326334952|ref|ZP_08201152.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692757|gb|EGD34696.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 376

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 7/169 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +E I+    ++RL  + K+            +      E     +   I     T +
Sbjct: 205 KALEEPIVDHVERERLPKIKKERKRITKARPITRVETPEEREARTIRVTKEINLYAKTIL 264

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +I   +   +L  I +++  + +   +  GHTD +        N +LS +RA + 
Sbjct: 265 FDLDKAIVKTQAEFILDNIAKIMQENEDFNFVIEGHTDNT---GTPEHNLQLSQERADAI 321

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L+  G+++ R+    G+   R   ++D       NRR++I V   +
Sbjct: 322 RAYLVNKGINKKRLEA-KGYGLSRPLESNDTERGREINRRVEINVIPDE 369


>gi|167588461|ref|ZP_02380849.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
          Length = 223

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 10/178 (5%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            + K     +   +  +  A K        A +  S L   + +     V       G+ 
Sbjct: 51  QLAKYNALDVRFQALAQQAAGKTNAPAHADAAQAWSALLKSLKE--QGQVTVVNAAHGVE 108

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARD 283
           I I  +    +F+   +  LP+   VL +I  VL       I + GHTD+ P        
Sbjct: 109 IGINAK---ILFNVGDARLLPDASGVLARIAGVLKAHPATSILVEGHTDSVPISTAKYES 165

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           NW LS  RA +  + L++ GV   R++ I G A +   +A D     + NRR+ I V+
Sbjct: 166 NWELSSARAGAVVRYLVERGVEPHRLAAI-GRADNLPLVAGDDAAARAKNRRVTIFVQ 222



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATD----DDTKKAIEQY 68
               G W I YAD +T LM  FL ++++        D   +A+ Q 
Sbjct: 22 EGAQSGRWLISYADLVTTLMVLFLALYVLQLAKYNALDVRFQALAQQ 68


>gi|289806378|ref|ZP_06537007.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 130

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 47/103 (45%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                +T    I + ++P      +      +     N  +LK
Sbjct: 66  PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK 108


>gi|225012121|ref|ZP_03702558.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225003676|gb|EEG41649.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 298

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 13/289 (4%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG-- 116
                 I         +   ++K   D ++        +  L      T+ + DL     
Sbjct: 1   MKKYSFIVLLVLMVIVSSCVSTKVFNDLESRYSVLKMERRSLEKSRDSTQQAFDLLNQKW 60

Query: 117 -STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
             T    Q  R   +          +          +K ++   + +        +   L
Sbjct: 61  QETEGYLQRSRDSVSEGLSQLKILRKEYALLEQNSDQKIQESIGANNALLKEIAVKEAQL 120

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              S+            ++   ++   LS  + +   KG+  E     + IS+    N  
Sbjct: 121 LARSERVDQLELLMSEQKEALLELKKRLSDALLNFEGKGLTVEQRNGKVYISM---ENKL 177

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA--RDNWRLSLDRA 292
           +F   S     +    L ++G VLA + +++ +  GHTD  PF        NW LS  RA
Sbjct: 178 LFKSGSWNVGSQGQEALGQLGTVLAENPDIVVVIEGHTDNVPFSPKEALESNWDLSTKRA 237

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
            +  ++L+ +  V    ++   G + +     ++     + NRRI+I++
Sbjct: 238 TAVVKILLNNESVLPQNLTAA-GRSEYVPIAPNNNATGRAVNRRIEIIL 285


>gi|51702435|gb|AAU08790.1| OmpA [Bordetella ansorpii]
          Length = 178

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++   +        I  GHTD+         N +LS  RA S
Sbjct: 72  FFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSI---GSDAYNQKLSERRAAS 128

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +   ++      + NRR++I +   +
Sbjct: 129 VKSYLVSKGIDANRIYT-EGKGEKQPVASNSTREGRAKNRRVEIEIVGTR 177


>gi|260062810|ref|YP_003195890.1| putative flagellar motor protein MotB [Robiginitalea biformata
           HTCC2501]
 gi|88784378|gb|EAR15548.1| putative flagellar motor protein MotB [Robiginitalea biformata
           HTCC2501]
          Length = 287

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 12/213 (5%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK---RLQ 193
               E        + E   ++   T L     +     L  L ++ +   K +    R  
Sbjct: 60  QTLEEQNAFLKANNQELINNMGNLTTLTAKGAENLEKSLESLKEKDLTIRKLQDAVTRRD 119

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +   +  +L G++ +   + +     +  + +SI D+    +F   S         VL 
Sbjct: 120 SVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFSSGSYNVTNAAKNVLG 176

Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           K+ +V+ +  +    + GHTD  P+R  +  DNW LS  RA S  ++L    GV   R++
Sbjct: 177 KVAQVVNNKPDFEFMVEGHTDNVPYRSGVLLDNWDLSAKRATSVVRILQNDFGVDPARMT 236

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              G +++    ++D     + NRR  I+V  +
Sbjct: 237 AA-GRSYYVPLASNDTAANRAKNRRTRIVVLPK 268


>gi|15606305|ref|NP_213684.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
 gi|2983507|gb|AAC07084.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
          Length = 235

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 13/154 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K L+ +A++I + +S            +  T   + I +   +    F       + E  
Sbjct: 88  KELKKVAQEIKAEMSKR-----GIWSDYALTGECLRIRVNTDK---FFPPGEDTLMKEAK 139

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSED 307
            ++  +   L      + I GHTD  P        NW LS+ RA S  +V  K  G   D
Sbjct: 140 GLILGLCYKLKPYALPVDIEGHTDNRPISTPRFPSNWELSMARAISVIEVFEKECGYPSD 199

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           ++S + G+A  +   ++D       NRR++  V+
Sbjct: 200 KLSAL-GYADTKPIASNDTPQGRQKNRRVEFCVK 232



 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLM 77
             +      +W   + D M++L+ FF++++ ++    +      K I   F        
Sbjct: 4  KKKEECPKPPAWLTSFGDLMSLLLTFFILLYSMSIISLEKFYQVLKGIVSAFGAQSVVFE 63

Query: 78 TAS 80
            +
Sbjct: 64 EGT 66


>gi|323495403|ref|ZP_08100480.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
 gi|323310326|gb|EGA63513.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
          Length = 322

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +SS    E+  +L ++ + +    +  + I G+TD+      A  N +LS  R
Sbjct: 211 DSGSFALNSSELKEESKSILDELVQFMNQYPQANVEITGYTDS---SGAAAYNQKLSEKR 267

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S    L   G+   RI  +SG   +    +++       NRR++I+V
Sbjct: 268 AQSVANALESEGIDSSRI-TVSGEGENNPIASNETREGREQNRRVEIVV 315


>gi|255036139|ref|YP_003086760.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254948895|gb|ACT93595.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 295

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +     +     K  +    L   +   L   +AD   + V  E  +  + +S+ D+ 
Sbjct: 112 AMMDQQGAQIRDLNKSIQHKDSLNMALVLNLKRSLADVSDEDVQIEVKKGVVYVSLSDKM 171

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLD 290
              +F   SS+       VL K+ ++L    E+ I I GHTD  P       DNW LS+ 
Sbjct: 172 ---LFRSGSSVINSAADNVLSKVAKILNDYKEIEILIEGHTDNVPIATDKVADNWDLSVL 228

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
           RA +  + L K  GV   R+    G   +  K+A+D  P  S NRR +I++  +
Sbjct: 229 RATAVARTLQKKYGVEPVRMIAG-GRGEYLPKVANDSAPNRSLNRRTEIIITPK 281


>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
          Length = 332

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 15/163 (9%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +    M  ++ + +    +             K V        +        ++  F 
Sbjct: 173 DNQPAPVMAEEQPVAEPQPVVEQAPVQEPVAAEPKMVTKTVAFQKL--------DSKSFA 224

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            +S+    E    L  +   L    +  + I GHTD++        N +LS  RA     
Sbjct: 225 HNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDST---GAEAYNQKLSEKRAQGVSD 281

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            L + G+   RI+   G        ++        NRR++I++
Sbjct: 282 ALQEKGIDAARITA-KGEGESNPIASNATAAGREQNRRVEIVI 323


>gi|13470497|ref|NP_102066.1| hypothetical protein mlr0220 [Mesorhizobium loti MAFF303099]
 gi|14021239|dbj|BAB47852.1| mlr0220 [Mesorhizobium loti MAFF303099]
          Length = 216

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L       GV    +   I++++        F+       P    VL  +  V
Sbjct: 77  MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNVDQDAVKPGFYPVLNSVALV 133

Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L    +    + GHTD++      + N+ LS  RA +    L   GV + R   ++GF  
Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLSGQGVDQRRF-AVTGFGK 189

Query: 318 HRLKIASDPMNSA--NRRIDILV 338
            R   ++        NRR++I +
Sbjct: 190 TRPIASNATAAGREQNRRVEIQL 212


>gi|149922900|ref|ZP_01911321.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149816217|gb|EDM75723.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 517

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 81/274 (29%), Gaps = 12/274 (4%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           G ++    +      +       + +D   DE  T N    + G            ++  
Sbjct: 249 GLSVTLGREKAKPAGDRDGDGLTDDVDSCPDEPETVNDYQDEDGCPEPDSDGDGFIDDKD 308

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR- 191
              N  ++ +         E  +D     D + S   E         ++      R    
Sbjct: 309 TCPNEAETVNDYQDEDGCPESDRDGDGFWDDQDSCPDEAETVNDYKDEDGCPESDRDGDG 368

Query: 192 -LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +L K      +     +              + +         F+  S      +  
Sbjct: 369 ILDELDKCPDEPETANGYQDEDGCAD---EVPKEVAAFTGAIKGITFETDSDKIRKSSTR 425

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L K  +VL    ++   + GHTD+         N  LS  RA S    L++ G+   RI
Sbjct: 426 TLDKAVKVLTDFPDIRIKVTGHTDSR---GDHDHNVDLSKRRAESVKTYLVEHGIDASRI 482

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +   GF   +    +D       NRRI+  +  R
Sbjct: 483 TT-DGFGPDKPVDTNDTRAGRANNRRIEFEIVQR 515


>gi|148254500|ref|YP_001239085.1| putative outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Bradyrhizobium
           sp. BTAi1]
 gi|146406673|gb|ABQ35179.1| putative outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Bradyrhizobium
           sp. BTAi1]
          Length = 707

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             K  D+        +     + KE   A     +L D+   +      L  +       
Sbjct: 537 AAKDADITIEGEAIYDKSAEQVRKELTDAAGGDVKLADVRIGLKPESPPLPTEACQPAFN 596

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
               +  I            FD  S+    E++ +L  I  V     +  I I GHTD  
Sbjct: 597 GLLAKGRIR-----------FDTGSAELSRESLALLDHIVVVAQRCKDAEIVIEGHTDNV 645

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
                  DN  LS  RA +    + ++G+   R++   G+   R   ++D     + NRR
Sbjct: 646 ---GDEEDNMDLSKRRAVAVVGYIGEAGIDTSRMTSA-GYGQTRPIASNDTAEGRAQNRR 701

Query: 334 IDILVE 339
           I+ +V+
Sbjct: 702 IEFVVK 707


>gi|330807884|ref|YP_004352346.1| OmpA/MotB, OmpA family protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375992|gb|AEA67342.1| Conserved hypothetical protein; putative OmpA/MotB, putative OmpA
           family protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 241

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARD 283
           +I++ D     +FD   S    E    L  +   L+H +   I + GHTD+         
Sbjct: 128 VITLND-AGKVLFDFDKSDLTAEARSQLDGLMGKLSHANVASIRVVGHTDSV---GSDAY 183

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           N  LS  RA S  + L+  G++ D+++   G         ++     + NRR+++ ++ 
Sbjct: 184 NQGLSERRASSVVEYLLTQGLAPDKLTS-EGKGESEPVADNETDEGRAQNRRVELHIQR 241


>gi|167032610|ref|YP_001667841.1| OmpF family protein [Pseudomonas putida GB-1]
 gi|166859098|gb|ABY97505.1| OmpF family protein [Pseudomonas putida GB-1]
          Length = 344

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 INRRVEAQVEA 341


>gi|159025748|emb|CAO02048.1| outer membrane protein A [Bordetella holmesii]
          Length = 163

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S+  PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 59  FFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSI---GTEAYNLKLSDRRAAS 115

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
               L+  G+  +RI    G    +    +      + NRR++I +
Sbjct: 116 VKAYLVSKGIDPNRIYT-EGKGEAQPIATNKTAEGRARNRRVEIEI 160


>gi|308271290|emb|CBX27898.1| hypothetical protein N47_G32220 [uncultured Desulfobacterium sp.]
          Length = 310

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 15/278 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            + F P   +    +  + ++    E  S    DL+            + G        +
Sbjct: 45  AEQFAPAELHKAHEALAVAEQSFIDEPDSHTTKDLA----YVAQRKSEQAGVLGAMAANK 100

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
            ++N        QQ+E  K      S+       +      +   +       ++ +   
Sbjct: 101 EVKNKSNAEFRDQQTEIVKQGKQNLSDSEMKTTAARAELDKLATVKEVKDKSDAEFRNQQ 160

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            +  ++ +          +   A+ + K    +    G+++++       +F  + S  L
Sbjct: 161 AEIVEQGKQNLFDSEMRTAAAQAE-LAKLAAVKEEERGLVVTL---SGGVLFQSAKSTLL 216

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P   V L ++ + L         + GHTD+         N  LS  RA +    L++ G 
Sbjct: 217 PSAQVKLDQVAKALLSIPARNLIVEGHTDSI---GSESYNQGLSQRRADAVRDYLVQKGY 273

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             DRI    G         +        NRR++I++E 
Sbjct: 274 PADRIQA-RGKGEGSPIADNTSPEGRANNRRVEIVIER 310


>gi|325274538|ref|ZP_08140599.1| OmpF family protein [Pseudomonas sp. TJI-51]
 gi|324100318|gb|EGB98103.1| OmpF family protein [Pseudomonas sp. TJI-51]
          Length = 345

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 216 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 275

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R    +       
Sbjct: 276 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 331

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 332 INRRVEAQVEA 342


>gi|190892542|ref|YP_001979084.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           CIAT 652]
 gi|190697821|gb|ACE91906.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           CIAT 652]
 gi|327192440|gb|EGE59397.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           CNPAF512]
          Length = 221

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     G+        I++++        FD       P     L  + 
Sbjct: 78  NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215


>gi|86358413|ref|YP_470305.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
 gi|86282515|gb|ABC91578.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
          Length = 221

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     G+        I++++        FD       P     L  + 
Sbjct: 78  NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215


>gi|241205517|ref|YP_002976613.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859407|gb|ACS57074.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 221

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     G+        I++++        FD       P     L  + 
Sbjct: 78  NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215


>gi|326392537|ref|ZP_08213903.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325991422|gb|EGD50048.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 114

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL 299
           S+   PE   VL KIG +L      I + G TD  P  N     NW LS+ RA +  ++L
Sbjct: 1   SADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDDLPMHNSKFDSNWELSVIRATNVVKIL 60

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +   G+   RIS + G+  +R  + +D       NRR+DI++ + +
Sbjct: 61  VNEVGIEPQRISAV-GYGEYRPVVPNDSEEHRRLNRRVDIVIMNTE 105


>gi|313497484|gb|ADR58850.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 239

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284
           +  +D     MF   S+   P     LQ +   L   +   + + GHTD+         N
Sbjct: 127 VITLDDNGAVMFAFDSAELTPAAQQRLQGLVAKLNSPTVAKVRVIGHTDSV---GSDSYN 183

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LS  RA S  + L+  G+   +++   G         ++     + NRR+++ +
Sbjct: 184 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238


>gi|257470361|ref|ZP_05634452.1| Outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
 gi|317064570|ref|ZP_07929055.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
 gi|313690246|gb|EFS27081.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
          Length = 186

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 15/178 (8%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           +  +N  L  L  E+       + +    K +   +           V        +++S
Sbjct: 20  SSVDNQPLKELVIEETENQFVMEDIDVSKKTLEEIIVFNEKG-----VTIRREGNNLVLS 74

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           +       +FD +      +    L  + + L  + ++   I G+TD   F      N  
Sbjct: 75  M---PELVLFDFNKYEVKNKIKGSLNALAKALEENPDIRIKIDGYTD---FIGSEGYNLE 128

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
           LS+ RA +    L   GV    I  I G+       ++  +   + NRR++ ++   +
Sbjct: 129 LSVKRADAIKDYLTNKGVKASNI-SIEGYGKQNPIASNQTETGRAKNRRVEFIISRDK 185


>gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 301

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 16/260 (6%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           S  K      ++    +    +    Q+ Q    E      S  +Q  + K +  +  E 
Sbjct: 23  SSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTRIKSLEEQLAYEKANNAQLKEA 82

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL-------QDLAKKISSTLSGL 206
             +L K+ D   + N + N  +  L  E   + K  + L         L   +++ L+  
Sbjct: 83  YANLQKTLDNSINQNSQGNVNISKLVDEINASNKYIQHLVNTKNKSDSLNMVLTNNLTRS 142

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265
           ++   +K V  +  +  + IS+ D     ++   S     +    L KI +++    +  
Sbjct: 143 LSREEMKDVDVQVLKGVVYISLSDNM---LYKSGSYEISDKAGETLSKIAKIIQDYKDYE 199

Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           + I G+TD  P  +   R+NW LS  RA S  Q L    GV   R++   G   +     
Sbjct: 200 VLIEGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAG-GRGQYNPIAD 258

Query: 324 SDPMNS--ANRRIDILVEDR 341
           +        NRR  I++  +
Sbjct: 259 NSTAAGKMKNRRTQIIITPK 278


>gi|170691988|ref|ZP_02883152.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170143272|gb|EDT11436.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 217

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + L  + E +  + GHTD++        N  LS++
Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + GV+  R+S   G   ++    ++     +ANRR++I +  
Sbjct: 160 RAQSVTGYLAQRGVAPQRLSA-EGMGQNQPIADNNTEAGRAANRRVEIYLRA 210


>gi|220924409|ref|YP_002499711.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219949016|gb|ACL59408.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 337

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 112/326 (34%), Gaps = 27/326 (8%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95
           Y D   T+L++   V++++          + Q  +     L   ++ I +  +       
Sbjct: 18  YVDALTTLLLS---VVFLLTIFVTGQF-FLSQEISGRDSVLDRLNRQIAELTDLLALERS 73

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
            +  L       ++++  +  +  ++ Q     +       ++            +    
Sbjct: 74  GRRTLEETTAALRSNLQ-ESETERRRLQDALTADQGAQGKATELGRQLDVEKGATNRALS 132

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            +   +    ++ ++       L+  +    + + R+ DL  +++  L+  V +      
Sbjct: 133 QVELLSQQIAAMRQQLAALEEALAASETRDRESQARIADLGSRLNVALAQRVQELARYRS 192

Query: 216 LFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVLA------ 260
            F      IL +  D R         +  +F    +    E    L +I   +       
Sbjct: 193 DFFGRLRQILGNRSDIRIVGDRFVLQSEVLFAAGQASLRAEAGPELDRIATAIRELNRQI 252

Query: 261 --HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                 V+ + GHTDA P  + A   NW LS  RA +  Q L+  G+    +   + F  
Sbjct: 253 PSDIPWVLRVDGHTDARPISSSAFPSNWALSAARAIAVVQYLVGRGIPPQHLLAGA-FGE 311

Query: 318 HRLKI--ASDPMNSANRRIDILVEDR 341
            +      SD   + NRRI++ + +R
Sbjct: 312 FQPIDTGTSDEAYARNRRIELKLTER 337


>gi|293369806|ref|ZP_06616382.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292635228|gb|EFF53744.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 297

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           K K R   L   + + L+  +    ++ +  +  +  + IS+ D     ++   S     
Sbjct: 115 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 171

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303
           +   VL KI +++    +    + G+TD  P  R   R+NW LS  RA S  Q L    G
Sbjct: 172 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNVYG 231

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           ++  R++   G         +D     + NRR +I++  +
Sbjct: 232 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 270


>gi|242280812|ref|YP_002992941.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242123706|gb|ACS81402.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 248

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 10/233 (4%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           +    +            +   + +        +   +  ++            +E+   
Sbjct: 13  DPPPEEGLPPWMATFADMVTLLLCFFVLLLSFANNDLAKFKELLGSLKDAFGVQMERKEE 72

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                    L ++++      KRL  L  +I + L    A     GV  +     +    
Sbjct: 73  DNLALTPSDLKRKEVKMDSNDKRLLGLVLRIKALLDEDDATRKSSGVKADQDGVVV---- 128

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRL 287
               +  +F+  S+   PE   VL K+  +L      + +RGHTD S   +     NW L
Sbjct: 129 -STDSATLFEPGSATLRPEAHKVLDKVISILKDHNYNLVVRGHTDNSEIHSRKFPTNWEL 187

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           S  RA SA + +++  G++  R+  + G+A  +  + +D     S NRR++  
Sbjct: 188 SSARAASALRYIVEQGGIAPKRLKAV-GYADTQPLVKNDSPANKSKNRRLEFF 239



 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%)

Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
          ++IK K         L  W   +AD +T+L+ FF+++      D    K +         
Sbjct: 5  VVIKPKNNDPPPEEGLPPWMATFADMVTLLLCFFVLLLSFANNDLAKFKELLGSLKDAFG 64

Query: 75 NLMTASKGIFDEQNPPE 91
            M   +       P +
Sbjct: 65 VQMERKEEDNLALTPSD 81


>gi|167032120|ref|YP_001667351.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166858608|gb|ABY97015.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 263

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        +    + +    +   +   +     A
Sbjct: 39  QSDPQSSKVAALETKDAQDWLNKADKAYMDREDQKQVDQLAYLTNQRIEVAKQTIALRTA 98

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K       +            +   +  + T  G L++  D     +FD + +   
Sbjct: 99  EGELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  + E    + G+TD+      A  N  LS  RA S    L+++GV
Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQSLSERRAGSVRMALVRAGV 211

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              RI    G+        +  +   + NRR+++ + +  
Sbjct: 212 DPARIVS-QGYGKEYPVADNGSNSGRAQNRRVEVTISNDN 250


>gi|254786261|ref|YP_003073690.1| hypothetical protein TERTU_2240 [Teredinibacter turnerae T7901]
 gi|237686902|gb|ACR14166.1| conserved repeat domain protein [Teredinibacter turnerae T7901]
          Length = 3228

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 92/308 (29%), Gaps = 18/308 (5%)

Query: 45   MAF---FLVMWI--INATDDDTKKA-IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98
            MA    F   W   +   D    K  I+  +    +   T  K   +       +    +
Sbjct: 2922 MALGYRFTPRWSAELGYLDLGEFKIDIQGSYQNPSEFYNTIEKLHPESGEGAFLAGMYLL 2981

Query: 99   DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
             LS    +   +   +       +Q       +               L  D        
Sbjct: 2982 PLSEKVQLGARAGIFRWHGDYTTQQPANNNTVVGTNYQKGTDGFVGLVLNMDVTPRWAAA 3041

Query: 159  KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA--KKISSTLSGLVADNIVKGVL 216
               +     N   ++    LS     A++R +    L    +I      + A+   + V+
Sbjct: 3042 LGWERFGFDNHNVDFINAGLSYRFGKAVRRNETTAPLKVVAEIPEAKPAIPAEPAKEYVV 3101

Query: 217  FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
                   +            F  +S+         LQ   + L       ISIR HTDA 
Sbjct: 3102 ISKDDCAL---FSGTLEGVTFATASAQLTEAAQHTLQNAVDALQRYPRLAISIRAHTDAV 3158

Query: 276  PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
                 A DN  LS  RA +  Q  + +GV  +R+S   G+        +      + NRR
Sbjct: 3159 ---GKAEDNLALSEARALAVQQFFVAAGVDNERLSA-RGYGEAEPVADNSTAAGRAQNRR 3214

Query: 334  IDILVEDR 341
            +++ + + 
Sbjct: 3215 VELKLAED 3222


>gi|256425427|ref|YP_003126080.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256040335|gb|ACU63879.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 285

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 9/168 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                         R   L   +   L G + +   K +  +  +  + I I D+    +
Sbjct: 108 AKDAYIQDLQSAIARKDSLNMALVMNLKGAIGNLDDKDINIKVEKGVVYIDISDKM---L 164

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYS 294
           F+  S    P+   VL K+ +VL         + GHTD++P++  +  DNW LS+ RA +
Sbjct: 165 FESGSYDVTPKAKEVLGKVAKVLLNQPDIEFMVEGHTDSNPYKKGVLLDNWDLSVKRATA 224

Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             +VL     +    I+   G + +    ++D       NRR  I++ 
Sbjct: 225 VTRVLQNDYNIPPAHITAA-GRSEYLPIASNDTPEGRATNRRTRIVIL 271


>gi|104780438|ref|YP_606936.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95109425|emb|CAK14126.1| putative outer membrane protein, OmpA family [Pseudomonas
           entomophila L48]
          Length = 230

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+         L  I   L     +  +S+ GHTD+       + N +LS  RA S
Sbjct: 126 FEFDSARLTANDKERLNTIATRLKKEAPSARLSVTGHTDSV---GSDKYNQKLSEARARS 182

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L++SGV       + G    +    +      + NRR +I ++ 
Sbjct: 183 VVEYLVESGVPRASFVSVVGAGETQPVADNATADGRAMNRRTEIKIQR 230


>gi|34556650|ref|NP_906465.1| CADF precursor [Wolinella succinogenes DSM 1740]
 gi|34482364|emb|CAE09365.1| CADF PRECURSOR [Wolinella succinogenes]
          Length = 341

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P  +  ++     L +   V   + GHTD+   +     N +LS  R+ + 
Sbjct: 236 FPFDSAEITPAYMDEVKDFALFLENHKGVSAKLEGHTDS---KGSDAYNKKLSAKRSNAV 292

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
            + L+K G+ + R+S   GF   R    +  D     NRR++ ++
Sbjct: 293 KEALIKLGIDKSRLSS-EGFGEERPIADNATDEGRQKNRRVEAII 336


>gi|26988814|ref|NP_744239.1| OmpF family protein [Pseudomonas putida KT2440]
 gi|148548857|ref|YP_001268959.1| OmpF family protein [Pseudomonas putida F1]
 gi|24983615|gb|AAN67703.1|AE016401_6 outer membrane protein OprF [Pseudomonas putida KT2440]
 gi|148512915|gb|ABQ79775.1| OmpF family protein [Pseudomonas putida F1]
 gi|313499790|gb|ADR61156.1| OprF [Pseudomonas putida BIRD-1]
          Length = 344

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 VNRRVEAQVEA 341


>gi|261856649|ref|YP_003263932.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261837118|gb|ACX96885.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 216

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++    + L       GV  +    GI +   +      F+ +S+   P+ + VLQ++ 
Sbjct: 75  NQMDKQAAQLQQQMANTGVEVQRQGDGIHLQAPEAIT---FNTNSATLKPQFMPVLQQLA 131

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + +      I  + G+TD++     A  N +LSL+RA S    L + GV  +RI  + G+
Sbjct: 132 QSVNQYPGTIVRVEGNTDST---GSASYNQQLSLNRAQSVASALSQYGVPYNRIQAV-GY 187

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342
              R   ++      + NRR+DIL+   Q
Sbjct: 188 GMTRPIASNATAAGRAQNRRVDILIVPAQ 216


>gi|218459695|ref|ZP_03499786.1| hypothetical protein RetlK5_09429 [Rhizobium etli Kim 5]
          Length = 91

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 261 HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               V+ + GHTD  P       RDNW LS  RA S  + L+  GV  DR+    GF   
Sbjct: 8   EINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAA-GFGEF 66

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
           +     D   +   NRRI++ + ++
Sbjct: 67  QPIAPGDTPEARATNRRIELKLTEK 91


>gi|213584595|ref|ZP_03366421.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 161

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 47/103 (45%)

Query: 12  DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71
              +++K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF  
Sbjct: 6   HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                +T    I + ++P      +      +     N  +LK
Sbjct: 66  PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK 108


>gi|254467608|ref|ZP_05081017.1| OmpA family protein [Rhodobacterales bacterium Y4I]
 gi|206684356|gb|EDZ44840.1| OmpA family protein [Rhodobacterales bacterium Y4I]
          Length = 474

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 7/169 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
              P    E+              ++++     L  +     V        ++I +    
Sbjct: 304 DAGPKAQLERRAPPPPPPLTPTTEEQVAKVAGFLEPEIKEGIVQVFQKGNTLIIRLT--- 360

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291
            + MF   S          + ++ E L      I + GH+D  P R+     N  LSL R
Sbjct: 361 GSGMFGSGSDQLSKAFRNPVNRVAEALNDEKGKIIVAGHSDNVPIRSSRFPSNMALSLAR 420

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    +       DR+S   G A       +      + NRRI+IL+
Sbjct: 421 AKSVMAGMANVMTDPDRLSA-EGRADKEPIADNSTRDGRAKNRRIEILL 468


>gi|116253010|ref|YP_768848.1| OmpA family outer membrane protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115257658|emb|CAK08755.1| putative OmpA family outer membrane protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 221

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     G+        I++++        FD       P     L  + 
Sbjct: 78  NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215


>gi|256846250|ref|ZP_05551707.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|256718019|gb|EEU31575.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
          Length = 191

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+    +  FD   S   P+   +L+ I E +  +   I+I GHTD+         N++
Sbjct: 62  TIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFK 118

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA S    L++ G+SEDRI  I      +    +      + NRR++  +  R+
Sbjct: 119 LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 176


>gi|124004460|ref|ZP_01689305.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123990032|gb|EAY29546.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 350

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 8/115 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + +   FD + +   P + V L K+ ++L     ++  I GHTD          N+ LS 
Sbjct: 240 RLDNVSFDFNKATFRPFSKVELDKLVKLLKQYPAIVILITGHTDNI---GTDTKNFDLSQ 296

Query: 290 DRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            RA +     L K GV  DRI +  G    +  +++  +   + NRR++  V  +
Sbjct: 297 RRAQTVANYLLTKGGVDPDRI-RTEGMGETQPVMSNNTNTGRALNRRVEFRVLKK 350


>gi|152990729|ref|YP_001356451.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
 gi|151422590|dbj|BAF70094.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
          Length = 234

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
             +                +L+ +       +F   S+ P  E      +  +    S  
Sbjct: 97  KALLQKAGIAAEVVDHGNKVLLRVNADN---LFLPGSAYPTKEAAKYFMEFCKRFKESGF 153

Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            I+I G+TD  P       +NW LS+ RA +  ++ +  G    R     G   +     
Sbjct: 154 RINIIGYTDNQPIHTAEFRNNWELSVYRAINILRLFVSCGYD-KRFLTAEGRGEYDPIAP 212

Query: 324 SDP--MNSANRRIDILVE 339
           ++     + NRR++ +V+
Sbjct: 213 NNTPQGRAKNRRVEFVVD 230



 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 20/44 (45%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
                  ++  W + + D M++L+ FF++++ ++    +    
Sbjct: 3  KKKKQECASIPGWLVSFGDLMSLLLTFFILLYSMSTVSVEKFYQ 46


>gi|46581013|ref|YP_011821.1| chemotaxis MotB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601691|ref|YP_966091.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46450434|gb|AAS97081.1| chemotaxis MotB protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561920|gb|ABM27664.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311234697|gb|ADP87551.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 243

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 6/203 (2%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
                           +     +++   N      + +      +   ++     I+  L
Sbjct: 35  SKETKEGLAGYFSSDAAKMQSNNVSPVANNPFVQSTDKLDTRDFKITEVERSHYAIAQKL 94

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             ++  +         +   + + +    +  M+   S+   PE   VL  +  +L    
Sbjct: 95  RQMLMADATPQSASGISADDVGVQLRVNSD-IMYAPGSAELAPEGAKVLDDVIRILKEYN 153

Query: 264 EVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLK 321
             + +RGHTD+  P  +I   NW LS  RA +A + ++  G +   R+  I+ +A  R  
Sbjct: 154 LYLVVRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIA-YADTRPL 212

Query: 322 IASDPM--NSANRRIDILVEDRQ 342
             +      + NRR++      +
Sbjct: 213 EPNTSPDSRAKNRRVEFYFHRPE 235



 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           SWK+ YADF+T +MAFFL+MWI+N T  +TK+ +  YF+     + + +          +
Sbjct: 9   SWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAKMQSNNVSPVANNPFVQ 68

Query: 92  RSSQNKIDLSIDEHITKN 109
            + +          + ++
Sbjct: 69  STDKLDTRDFKITEVERS 86


>gi|163759606|ref|ZP_02166691.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
 gi|162283203|gb|EDQ33489.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
          Length = 215

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L A     GV        I++++        FD   S   P+    L  +  
Sbjct: 75  YMDQQEAQLRAQLQGTGVSVTRVGDKIILNMPSNIT---FDSDQSAVKPQFYETLNSVAL 131

Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL   +  ++ + GHTD++        N  LS  RA S    L+  G    R     GF 
Sbjct: 132 VLQKFNRSLVDVAGHTDST---GSDSYNLTLSQQRAQSVSSYLISQGNDARRFYT-QGFG 187

Query: 317 HHRLKIAS--DPMNSANRRIDILV 338
             R    +  D   +ANRR++I +
Sbjct: 188 ESRPIADNGTDAGRAANRRVEIQI 211


>gi|121596298|ref|YP_988194.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
 gi|222112527|ref|YP_002554791.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
 gi|120608378|gb|ABM44118.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
 gi|221731971|gb|ACM34791.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
          Length = 216

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288
           D  +   F  + S   P    +L +  E L ++    + I GHTD++        N  LS
Sbjct: 102 DIPSDISFATNRSDIQPNFRPILDRFAEGLRNNPNTEVRIVGHTDST---GSDAINNPLS 158

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           LDRA S    L   GV+ +RI  + G        ++D     + NRR++I V +RQG
Sbjct: 159 LDRAESTRNYLTARGVNGNRIH-VEGRGSREPVASNDTSDGRARNRRVEIYVGERQG 214


>gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25]
 gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25]
          Length = 320

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L++ G+   RI    G   +    ++D       NRR++I+V
Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 311


>gi|134294581|ref|YP_001118316.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134137738|gb|ABO53481.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 319

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 82/278 (29%), Gaps = 18/278 (6%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                + ++            ++   +       IT    +   G      +        
Sbjct: 47  VATTALPSTPNASAAPGAAPGTASGTVVHGTAGTITPPPANATPGQVVAGGKVPDEATKA 106

Query: 132 FYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             L   + +    N + +              ++ K    +     +    +     E  
Sbjct: 107 AVLQKLRDTYGAANVVDQIEVGDVATPPNWSTNVQKLLGAQLKQISKGQLKINGTQIEVK 166

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             +  + + Q LA  ++++L+          V         ++       T  F+  S+ 
Sbjct: 167 GEVHNEAQRQQLASDMANSLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSAT 223

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+   +L ++   LA        I GHTD          N  LS  RA +    L+  
Sbjct: 224 LTPQGKQILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITK 280

Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           G+   +++  +G    +    +D     + NRRI+  V
Sbjct: 281 GIQPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 317


>gi|323490130|ref|ZP_08095350.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
 gi|323396178|gb|EGA89004.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
          Length = 256

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 9/204 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     +       G    ++       +        P++ E    +   K  ++L    
Sbjct: 48  AIAESFNSELQGGSGVLDEQAPVESFETSPTAELSEDPVTGESPEEVFEAKDQEELLDFQ 107

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   + +  + +   +  + TR G+ I I +     +F+  S+  L  +  +  +I  +L
Sbjct: 108 NKIDTYIDENGLAPRLQTDMTRKGLKIIIKE---GVLFESGSATILKGSEKITDEISNLL 164

Query: 260 -AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFA 316
                 +I I GHTD  P        NW LS  RA +    +L    +S  + S  +G++
Sbjct: 165 ITDPPRMIFIEGHTDNVPAGTAEYPTNWELSSARAINFMRNLLENDKLSPQKFSA-TGYS 223

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
            ++   ++D     + NRR+++L+
Sbjct: 224 QYQPIASNDTPEGRAENRRVEVLI 247



 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 4/135 (2%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K K       +   +W + YAD +T+L+A F+V++  +  D     AI + FN    + 
Sbjct: 1   MKLKRKKKHEEHVDEAWLLPYADVLTLLLALFIVLFASSQVDAKKFNAIAESFN----SE 56

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
           +    G+ DEQ P E    +      ++ +T  S +    + +Q++          Y+  
Sbjct: 57  LQGGSGVLDEQAPVESFETSPTAELSEDPVTGESPEEVFEAKDQEELLDFQNKIDTYIDE 116

Query: 137 SQQSEHCKNSLTRDS 151
           +  +   +  +TR  
Sbjct: 117 NGLAPRLQTDMTRKG 131


>gi|325275242|ref|ZP_08141202.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324099634|gb|EGB97520.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 231

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+         L  I   L     +  +S+ GHTD+         N +LS  RA+S
Sbjct: 127 FEFDSARLTATDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 183

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L++SGV       + G    +    +        NRR +I ++ 
Sbjct: 184 VTDYLVQSGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 231


>gi|255534904|ref|YP_003095275.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
 gi|255341100|gb|ACU07213.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
          Length = 230

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I +  + N   F   SS         L K+ +VL ++ +  I+I GHTD+   +     N
Sbjct: 105 IRVTMKENMVNFGFDSSELTSAAKTNLDKLAQVLKNNMDTNINIYGHTDS---KGTDAYN 161

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             LS  RA +    L+  GV+  R+  + G        ++D     + NRR++  +   +
Sbjct: 162 LSLSERRAAAVRSYLISQGVASSRMLTM-GVGEKEPVASNDTDAGRAENRRVEFAITANE 220


>gi|261416280|ref|YP_003249963.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372736|gb|ACX75481.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 485

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 17/278 (6%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPP----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
             +P   N    +   F +   P     +   +    + D    + +V+           
Sbjct: 212 SLDPKFNNPSLGNPNFFCQSTSPMIKRGKGKLDIGLTATDVVKEEEAVEETRNPDTDGDG 271

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                 +   LS              +  +  D  +  D     + + +    P  + K 
Sbjct: 272 LCDPWVSEEGLSEKYAGVCTGFDNCPEEAEDFDGYQDDDGCPDADNDRDGLCDPWVEAKG 331

Query: 184 LAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           +  +     + +        S     D+             + +          F+   S
Sbjct: 332 MLSQYAHICKGVDLCPEQAESLNNYKDDDGCPDEVPQPPKKVFV-----LEGVNFESGKS 386

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
               ++ + L K+ +++    E    I GHTD          N  LS DRA +    L++
Sbjct: 387 TITQDSYISLMKVVDIMETFPEATFEIVGHTDNI---GNKDKNMTLSADRANAVKNFLVE 443

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            G++E R++   G    +   ++      + NRRI+ +
Sbjct: 444 KGIAESRMTT-QGMGDTKPVASNKTPEGRAQNRRIEFI 480


>gi|156072340|gb|ABU45492.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302328072|gb|ADL27273.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 511

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 17/278 (6%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPP----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
             +P   N    +   F +   P     +   +    + D    + +V+           
Sbjct: 238 SLDPKFNNPSLGNPNFFCQSTSPMIKRGKGKLDIGLTATDVVKEEEAVEETRNPDTDGDG 297

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                 +   LS              +  +  D  +  D     + + +    P  + K 
Sbjct: 298 LCDPWVSEEGLSEKYAGVCTGFDNCPEEAEDFDGYQDDDGCPDADNDRDGLCDPWVEAKG 357

Query: 184 LAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           +  +     + +        S     D+             + +          F+   S
Sbjct: 358 MLSQYAHICKGVDLCPEQAESLNNYKDDDGCPDEVPQPPKKVFV-----LEGVNFESGKS 412

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
               ++ + L K+ +++    E    I GHTD          N  LS DRA +    L++
Sbjct: 413 TITQDSYISLMKVVDIMETFPEATFEIVGHTDNI---GNKDKNMTLSADRANAVKNFLVE 469

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            G++E R++   G    +   ++      + NRRI+ +
Sbjct: 470 KGIAESRMTT-QGMGDTKPVASNKTPEGRAQNRRIEFI 506


>gi|107026971|ref|YP_624482.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116691833|ref|YP_837366.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|105896345|gb|ABF79509.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116649833|gb|ABK10473.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 223

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
           +F+   +  LP +  VL +I + L+   T  I + GHTD+ P  N     NW LS  RA 
Sbjct: 116 LFNVGDARLLPHSSPVLNQIAQALSEHATGDILVEGHTDSVPIANAKYESNWELSSARAG 175

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           S  + L + GV+  R++ I G A  +  +A D     + NRR+ I V
Sbjct: 176 SVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAGSRARNRRVTIFV 221



 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          +   +      G W I YAD +T LM  FL ++++         A++  +    +    A
Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69

Query: 80 SKGIFDEQNPPERSS 94
          +    D         
Sbjct: 70 ATASVDAAKSDPAPP 84


>gi|148653943|ref|YP_001281036.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148573027|gb|ABQ95086.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
          Length = 218

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 8/148 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L       GV          I ++       F   S+         L K+  
Sbjct: 73  YMENQEKQLKQQMAGTGVEVNRNPNTGNIDLV-MPGNITFAHDSTNINGSFYNTLDKLAS 131

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +    +   ++ GHTD+         N  LS  RA +    L++ GVS +RI +  G+ 
Sbjct: 132 TMVQYGDTTVNVMGHTDSV---GNPSYNQGLSERRAQAVASYLIQRGVSSNRI-RTMGYG 187

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
            ++   ++   +    NRR++I +   Q
Sbjct: 188 QNQPVASNSTESGRLQNRRVEIQIVAPQ 215


>gi|156977475|ref|YP_001448381.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
 gi|156529069|gb|ABU74154.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
          Length = 334

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           ++  +  F+  S+         L      L    +  + I G+TD+      A  N +LS
Sbjct: 215 EEYGSGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNLKLS 271

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RA +    L+ +G+  DR   ++G         +        NRR+ + V
Sbjct: 272 ERRAQAVADYLIAAGIDADRF-TVTGMGEEDPVADNSTHEGREQNRRVVVHV 322


>gi|330980720|gb|EGH78823.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 271

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 12/247 (4%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              + + + S D +    +        ++ I    +  ++E   + L   ++       S
Sbjct: 27  DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219
           +   +   +  N  L      K+   +++ +L     K++S        ++ +  +    
Sbjct: 87  SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
           T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++   
Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              +DN +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++I
Sbjct: 200 GDRQDNLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDEKG 265


>gi|149184216|ref|ZP_01862534.1| OmpA/MotB [Erythrobacter sp. SD-21]
 gi|148831536|gb|EDL49969.1| OmpA/MotB [Erythrobacter sp. SD-21]
          Length = 276

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 2/201 (0%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            +++ +     G  L    +   +  +     L           +    ++ +  ++S  
Sbjct: 76  EQSAGSDGMLGGASLTDVDNYPHAAGQTGTNSLTIPRDATGGPKEGVATIKRINSRVSKM 135

Query: 203 LSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +        +++ V    T TGI I ++D  N  MF   +++   +   +L  I   LA 
Sbjct: 136 IESDKELKRLMRQVRMIDTTTGIRIDLVDDANFSMFSLGTTVLTNDARELLVVIAAALAP 195

Query: 262 STEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               I++RGHTDA  +R     +NW LS  RA    Q L++ G++++R  +I G A    
Sbjct: 196 EGGKITVRGHTDALRYRYPSRVNNWSLSAGRAEETRQTLIREGINQERFRRIEGVAATEP 255

Query: 321 KIASDPMNSANRRIDILVEDR 341
            I  +P +  NRRI I +ED 
Sbjct: 256 LIGDNPSDPRNRRISISLEDS 276



 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
           S     +     II+KK   + +  ++ G+WK+ YADF+T +MAFFL++W++ AT +D +
Sbjct: 2   SGAATGRNEPAPIIVKKI-TVVEAGHHGGAWKVAYADFVTAMMAFFLLLWLLGATTEDQR 60

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K +  YF P        S G          +  +    +  +  T +    +  +   K+
Sbjct: 61  KGLADYFTPTLVKTKEQSAGSDGMLGGASLTDVDNYPHAAGQTGTNSLTIPRDATGGPKE 120

Query: 123 QYQ 125
              
Sbjct: 121 GVA 123


>gi|330899174|gb|EGH30593.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 271

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 12/247 (4%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              + + + S D +    +        ++ I    +  ++E   + L   ++       S
Sbjct: 27  DSGQALQQASTDFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219
           +   +   +  N  L      K+   +++ +L     K++S        ++ +  +    
Sbjct: 87  SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
           T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++   
Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              +DN +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++I
Sbjct: 200 GDRQDNLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDEKG 265


>gi|254489078|ref|ZP_05102282.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
 gi|214042086|gb|EEB82725.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
          Length = 416

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 7/168 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            +++    A            +++     L  +     V     +  I + +     + M
Sbjct: 250 QVAELMRRAPPPPPPPPPPDVQLNRVKGFLQKEISDGIVEVFQDQQTITVRL---AGSNM 306

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295
           F   S    P     L+K+ + L  +   + + GH+D  P ++     N RLSL RA + 
Sbjct: 307 FGSGSDRLQPAFEEPLRKVAQALDETEGPVIVVGHSDNIPIKSSRFPSNERLSLARAEAV 366

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            + L       DR+    G A  +    +      + NRRI+I++  +
Sbjct: 367 MRTLEGKLAKSDRLEA-EGRAEKQPIADNSTREGRAKNRRIEIVLVRK 413


>gi|172062063|ref|YP_001809715.1| hypothetical protein BamMC406_3023 [Burkholderia ambifaria MC40-6]
 gi|171994580|gb|ACB65499.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MC40-6]
          Length = 434

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 8/225 (3%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           T        L+  +                +        +         +  + +     
Sbjct: 214 TLITGARDALQPELSPHWRGAPPGKLPLLRSVPVWASAAVAALALFALFVFYQYHLLTQR 273

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              E  +    K+RL    +++      L  +     V  +      ++     R   MF
Sbjct: 274 HVLETRILEIGKERLASAPQRLR-LSQLLRNEIARGLVTVDEDDRRSVVVF---RGDSMF 329

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296
                + LPE   +L K+   +A     + + GHTD  P R+ A  DN  LS  RA    
Sbjct: 330 ASGKRVVLPEIEPILNKVASEVARVGGNVLVSGHTDNQPIRSAAFADNQVLSEKRAEFVA 389

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           Q+L + G   +RI  + G    +    +        NRR++I+V 
Sbjct: 390 QILQRDGTPAERIRAV-GKGDTQPVGDNATAAGRALNRRVEIMVT 433


>gi|4580972|gb|AAD24559.1|AF117967_1 OprF [Pseudomonas putida]
          Length = 338

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESTRVDSV-GYGETRPVADNATEEGRA 330

Query: 331 -NRRID 335
            NRR++
Sbjct: 331 VNRRVE 336


>gi|172064681|ref|YP_001812331.1| DotU family type IV/VI secretion system protein [Burkholderia
           ambifaria MC40-6]
 gi|171998166|gb|ACB69082.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MC40-6]
          Length = 436

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARD 283
             S++  +   MF    S  LP     L K+G  +A     + +RGHTD  P R+     
Sbjct: 317 RRSVVVFKGDSMFASGQSTVLPVVEPALGKVGGEVARVGGSVLVRGHTDNQPIRSAVFPS 376

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N  LS  RA    Q+L + G   DRI  I G    +    +        NRR++I+V  +
Sbjct: 377 NLVLSEKRAAYVAQILQQRGTPADRIHAI-GKGDTQPVGDNATAAGRALNRRVEIVVTQQ 435

Query: 342 Q 342
           +
Sbjct: 436 R 436


>gi|254248921|ref|ZP_04942241.1| OmpA/MotB [Burkholderia cenocepacia PC184]
 gi|124875422|gb|EAY65412.1| OmpA/MotB [Burkholderia cenocepacia PC184]
          Length = 223

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 12/170 (7%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L   +     A     +       ++     L +      +       G+ I I  + 
Sbjct: 60  QTLARQAGGAATAAVDTAKADPAPPWLAL----LDSLKSNGRISLVKAPHGVEIGIDAK- 114

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290
              +F+   +  LP++  VL +I + L+  T   I + GHTD+ P  N     NW LS  
Sbjct: 115 --ILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSA 172

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S  + L + GV+  R++ I G A  +  +A D     + NRR+ I V
Sbjct: 173 RAGSVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAASRARNRRVTIFV 221



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          +   +      G W I YAD +T LM  FL ++++         A++  +    +    A
Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69

Query: 80 SKGIFDEQNPPERSS 94
          +    D         
Sbjct: 70 ATAAVDTAKADPAPP 84


>gi|254490409|ref|ZP_05103596.1| Thrombospondin type 3 repeat family [Methylophaga thiooxidans
           DMS010]
 gi|224464375|gb|EEF80637.1| Thrombospondin type 3 repeat family [Methylophaga thiooxydans
           DMS010]
          Length = 200

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--S 267
              +GV+ +     +    +       F    ++   E   +L++   +L  +  ++   
Sbjct: 70  GTPEGVIVDQDGCPLAGENLLSLTGVNFAFDKAVLTEEAKTILEEAVTLLKETDGIVEVR 129

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           + GHTD+         N  LS  RA S    L   G+  + +  + G        ++D  
Sbjct: 130 VEGHTDSI---GTEAYNQDLSQRRAQSVVDYLTSRGIDGNNLVPV-GLGESSPVASNDSK 185

Query: 327 -MNSANRRIDILV 338
              +ANRR+D +V
Sbjct: 186 AGRAANRRVDFVV 198


>gi|162456876|ref|YP_001619243.1| hypothetical protein sce8593 [Sorangium cellulosum 'So ce 56']
 gi|161167458|emb|CAN98763.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 210

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 24/183 (13%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            +      L+ E+      + RL+ L   ++  L+          +              
Sbjct: 41  FQVDLARDLAAERATRATERARLEALESALAGPLAEGRITLTEGRIGI------------ 88

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRGHTDASPFRNI---AR 282
             R + +F+ +S+   P  I +L+ + + L    E     I + G TD  P  +      
Sbjct: 89  --RGSILFELNSAELQPAGIALLRALADPLKAYLEHHDELIMVSGFTDDRPLTSSSRGYA 146

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           DNW LS  RA +  + L  +GV +  +    GF        +D     + NRR++I    
Sbjct: 147 DNWELSAQRALTVTRALAAAGVPDTSLFAA-GFGERHPVAPNDTSENRAKNRRVEISPIP 205

Query: 341 RQG 343
           R+G
Sbjct: 206 RRG 208


>gi|84625147|ref|YP_452519.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578417|ref|YP_001915346.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|84369087|dbj|BAE70245.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522869|gb|ACD60814.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 365

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +E        +  G         +    +    + + +   + +   D           +
Sbjct: 119 EEEFDATPNPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPREN 178

Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +       +P                      L D    +++           + +
Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     + I +        FD + S   P+ I +L +  E+L    +  + + GHTD+
Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326
              +     N +LS  RA + Y  L K+GV   R+    G+   R    +          
Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGKSRPIAPNTNPDGSDNPE 351

Query: 327 MNSANRRIDILVED 340
             + NRR ++ V++
Sbjct: 352 GRAKNRRTELNVQN 365


>gi|323343250|ref|ZP_08083477.1| OmpA family protein [Prevotella oralis ATCC 33269]
 gi|323095069|gb|EFZ37643.1| OmpA family protein [Prevotella oralis ATCC 33269]
          Length = 287

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 9/233 (3%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           ++ ++ Q  + Q   +     S  +Q    K               + +       +   
Sbjct: 45  ELTNSYQTAKEQLAASQARVSSLEEQLAQQKRDYAALQNSLDKSLTNANQNNVSIDKLVD 104

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ D   
Sbjct: 105 QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM- 163

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDR 291
             ++   S          L KI +++    +    I G+TD  P      R+NW LS  R
Sbjct: 164 --LYKSGSYEINDRAQTTLSKIAKIIMDYKDYDVLIEGNTDNVPISRENIRNNWDLSCLR 221

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A S  Q L    GV   R++   G   +    ++        NRR  I++  +
Sbjct: 222 ASSVVQYLQNHYGVDPKRLTAG-GRGEYNPIASNGTEVGRQRNRRTQIIITPK 273


>gi|237740939|ref|ZP_04571420.1| outer membrane protein [Fusobacterium sp. 4_1_13]
 gi|229430983|gb|EEO41195.1| outer membrane protein [Fusobacterium sp. 4_1_13]
          Length = 147

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+    +  FD   S   P+   +L+ I E +  +   I+I GHTD+         N++
Sbjct: 18  TIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFK 74

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA S    L++ G+SEDRI  I      +    +      + NRR++  +  R+
Sbjct: 75  LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 132


>gi|124006466|ref|ZP_01691299.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123987879|gb|EAY27559.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 693

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            L+  N  + V  +     +      + N   FD +     P +   L ++ ++L    +
Sbjct: 558 DLLQANHYREVKHDLYLVPLNQGQSIRLNNLFFDYNQDTLKPSSYPELNRLIKILQKHPQ 617

Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           +   I GHTDA      A  N  LS  RA S  + L   G+++ R+ +  G+   R    
Sbjct: 618 MNIEISGHTDA---HGSADKNLTLSQARANSVLRYLTTQGIAKQRL-RAKGYGQGRPVAN 673

Query: 324 SDP--MNSANRRIDILVED 340
           +      + NRR++ L+  
Sbjct: 674 NTTVAGRALNRRVEFLILK 692


>gi|130681|sp|P22263|PORF_PSESY RecName: Full=Outer membrane porin F; Flags: Precursor
 gi|151407|gb|AAA25910.1| oprF [Pseudomonas syringae]
          Length = 344

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      D E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   +    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|308270955|emb|CBX27565.1| hypothetical protein N47_H23870 [uncultured Desulfobacterium sp.]
          Length = 229

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 73/216 (33%), Gaps = 8/216 (3%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                     +     +             +T                         +++
Sbjct: 18  CATKTQTGTLAGTGVGAAVGAGLGQAIGGNTTGTLVGAAIGAAAGGLAGGAIGNYMDRQE 77

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             ++       +         + +     + +   ++++  + +  ++  +SS   P   
Sbjct: 78  AAMRQALADSEAASINREQQVLAQATADSSKKVRDVLTVTFKSDF-LYAVNSSTLFPGAY 136

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L ++ +V+    +  I + GHTD++     A  N +LS  RA +    L+  GV+  R
Sbjct: 137 DELDRVAKVINQYPDTRIQVGGHTDST---GSAEYNQKLSEQRAQAVKNALVSRGVNASR 193

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           IS I G+  ++   +++       NRR++I +   Q
Sbjct: 194 ISAI-GYGENKSIASNETEAGRQQNRRVEIRIIPNQ 228


>gi|288575422|ref|ZP_06393704.1| OmpA family protein [Neisseria mucosa ATCC 25996]
 gi|288568103|gb|EFC89663.1| OmpA family protein [Neisseria mucosa ATCC 25996]
          Length = 190

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +     +  E     I + + +      F   S+         L    E
Sbjct: 40  YMDYQEKKLRENLKNTNIEVERQGNQIKLVMPENVT---FATGSAALSDHARNALATASE 96

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA +    L   GV+  R++   G+ 
Sbjct: 97  TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRALAVADYLQSRGVNGSRLTTA-GYG 152

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
                 ++      + NRR++IL+   Q
Sbjct: 153 SRHPIASNATVEGRAQNRRVEILINPDQ 180


>gi|171318547|ref|ZP_02907697.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MEX-5]
 gi|171096248|gb|EDT41156.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MEX-5]
          Length = 460

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 6/171 (3%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +  L + ++           + +        L  +   + +  + T    +I++    
Sbjct: 290 PVVSALRQARLPQGGGSPEPASVRQYAPKLAVLLAPEIARRTLQIDETADRAVITLNSD- 348

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              +F   S+  LP  + V+++IG+ L      + + GHTD  P       NW+LSLDRA
Sbjct: 349 --GLFASGSARVLPSQVSVIRRIGDALRDVPGRVIVVGHTDNQPPSPGKPSNWQLSLDRA 406

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            S  Q+L       +R     G          D     + NRR+ I V   
Sbjct: 407 GSVVQLLRDEAGGLERFLA-QGRGESEPVAPDDSAADRARNRRVVITVLAP 456


>gi|78213752|ref|YP_382531.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Synechococcus sp. CC9605]
 gi|78198211|gb|ABB35976.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Synechococcus sp. CC9605]
          Length = 217

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 12/124 (9%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +ID  +  +FD   S   P     L+   + +       + I GHTD+   +     N  
Sbjct: 97  LIDISSDILFDFDKSSLKPSAFPSLRIASKQITEMARGDVRIEGHTDS---KGADAYNQS 153

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRRIDILV 338
           LS  RA S  + L+++G   D    + GF   +    ++             NRR++I+V
Sbjct: 154 LSEARAESVRKWLVENGGLTDINFVVRGFGETKPIEPNETDKGEDNPAGRQRNRRVEIIV 213

Query: 339 EDRQ 342
              +
Sbjct: 214 NTSE 217


>gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 301

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 16/260 (6%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           S  K      ++    +    +    Q+ Q    E      S  +Q  + K +  +  E 
Sbjct: 23  SSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTRIKSLEEQLAYEKANNAQLKEA 82

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL-------QDLAKKISSTLSGL 206
             +L K+ D   + N + N  +  L  E   + K  + L         L   +++ L+  
Sbjct: 83  YANLQKTLDNSINQNSQGNVNISKLVDEINASNKYIQHLVNTKNKSDSLNMVLTNNLTRS 142

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265
           ++   +K V  +  +  + IS+ D     ++   S     +    L KI +++    +  
Sbjct: 143 LSREEMKDVDVQVLKGVVYISLSDNM---LYKSGSYEISDKAGETLSKIAKIIQDYKDYE 199

Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323
           + I G+TD  P  +   R+NW LS  RA S  Q L    GV   R++   G   +     
Sbjct: 200 VLIEGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAG-GRGQYNPIAD 258

Query: 324 SDPMNS--ANRRIDILVEDR 341
           +        NRR  I++  +
Sbjct: 259 NSTAAGKMKNRRTQIIITPK 278


>gi|237718629|ref|ZP_04549110.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229452089|gb|EEO57880.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 290

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           K K R   L   + + L+  +    ++ +  +  +  + IS+ D     ++   S     
Sbjct: 108 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 164

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303
           +   VL KI +++    +    + G+TD  P  R   R+NW LS  RA S  Q L    G
Sbjct: 165 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNIYG 224

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           ++  R++   G         +D     + NRR +I++  +
Sbjct: 225 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 263


>gi|159025742|emb|CAO02045.1| outer membrane protein A [Bordetella hinzii]
 gi|159025744|emb|CAO02046.1| outer membrane protein A [Bordetella hinzii]
 gi|159025746|emb|CAO02047.1| outer membrane protein A [Bordetella hinzii]
          Length = 177

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S+  PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 70  FFDFDKSVLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +    +      + NRR++I +   +
Sbjct: 127 VKAYLVSKGIDPNRIYT-EGKGELQPIATNKTAEGRARNRRVEIEIVGSR 175


>gi|160884511|ref|ZP_02065514.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
 gi|298481223|ref|ZP_06999417.1| OmpA family protein [Bacteroides sp. D22]
 gi|156110250|gb|EDO11995.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
 gi|298272797|gb|EFI14364.1| OmpA family protein [Bacteroides sp. D22]
          Length = 297

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           K K R   L   + + L+  +    ++ +  +  +  + IS+ D     ++   S     
Sbjct: 115 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 171

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303
           +   VL KI +++    +    + G+TD  P  R   R+NW LS  RA S  Q L    G
Sbjct: 172 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNIYG 231

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           ++  R++   G         +D     + NRR +I++  +
Sbjct: 232 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 270


>gi|5081414|gb|AAD39369.1|AF117974_1 outer membrane protein OprF [Pseudomonas sp. DC]
          Length = 343

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++  +    FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 214 NVTVDANGCPAVAEVVRVQLDVKFDFDKSVVKPNSYRDIKNLADFMKQYPQTTTTVEGHT 273

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL+   GV  +R+S + G+   R    +       
Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLVNQYGVGANRVSSV-GYGETRPVADNATDAGRA 329

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 330 VNRRVEAEVEA 340


>gi|116622076|ref|YP_824232.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225238|gb|ABJ83947.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 605

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 7/228 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T++ K+    +         +         T    +   L +  + +    + E   L 
Sbjct: 367 ETDRLKRENDAQATAALAETDRLKRENDAQATAAQNETDRLKRQNEAQALAAQNEADRLK 426

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             ++ + +A K         K  +      +   ++               +I   +  +
Sbjct: 427 AENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIVNMSDVL 486

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD             L ++  +LA      + + G+TD+         N  LS  RA S 
Sbjct: 487 FDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSV---GSETSNQLLSERRATSV 543

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
              L  +G+    ++   G        ++D       NRR++++V   
Sbjct: 544 RDYLTSAGIPPASVTA-KGLGETLPVASNDNAAGRQQNRRVELVVSGD 590


>gi|311695725|gb|ADP98598.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 269

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 84/247 (34%), Gaps = 8/247 (3%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
            +  ++   +                R  +     +  Q +   +      S    +   
Sbjct: 23  SAPKDNQMVDEAKAAYEDIRTDPDVARSGDRQLRSARDQLARAERLLEEGASTAEIEHAA 82

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                 +    E      L ++   A +R+K L+  A+   +  +   A  + + +    
Sbjct: 83  YLANRHAEIAREQAERAKLQQQINSAEERRKELELQARSAEAQAAQQEAAELRRQMEAMQ 142

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
                   ++      +FD + +   P     + ++ E +A        + G+TD++   
Sbjct: 143 AEQTDRGMVL-TLGDVLFDLNRAELKPAGETTVGRLAEFMAEYENRRVRVEGYTDST--- 198

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
                N +LS  RA +  + LM  G++  RI ++ GF        ++       NRR++I
Sbjct: 199 GAESYNQQLSERRAEAVREALMDRGINRARI-EVQGFGEQYPVATNETPAGRQQNRRVEI 257

Query: 337 LVEDRQG 343
           ++ D  G
Sbjct: 258 VISDADG 264


>gi|316933944|ref|YP_004108926.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315601658|gb|ADU44193.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 284

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 103/323 (31%), Gaps = 59/323 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K  ++D       W + +AD M        ++             +  +     + +   
Sbjct: 12  KKKVEDGHAVGHGWFVTFADLMA-------LLVSF-------FVMLVSFSTQDLRKMQIV 57

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           +  + +     +    ++    ++         +K        Q     +      +   
Sbjct: 58  AGSMREAFGVQQN---SRFAGVLETDGVPVQGQVKSKRNVAPDQASNTPHLEEAGGSGSA 114

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + H K                                  S     A++    L ++    
Sbjct: 115 ASHAK--------------------------AEREFALASASLRQALQDVPELTEM---- 144

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                        + V+FE T  G+ + + DQ   PMF   S+IP   T  ++ ++   L
Sbjct: 145 ------------SRNVIFEETPVGLNLELTDQDGRPMFADGSAIPYERTRKLVARLAAPL 192

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             ++  ISI GHT A+  +    D   LS++RA +  ++L + G+   ++  + G     
Sbjct: 193 RATSLRISIVGHTAATLMQVDDDDPLSLSINRANAVREILKQQGLPTSQVLSLVGKGDGD 252

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
                 PM +ANRR+ I +    
Sbjct: 253 PLFPDAPMLAANRRVTITLMREN 275


>gi|78356732|ref|YP_388181.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219137|gb|ABB38486.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 352

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 17/290 (5%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           NA       A    F P+ + +          +        +K   +    +      L+
Sbjct: 71  NAIPALKYNASMHMFAPYEEVVPYGPYSKSGFEQGIMSLKADKEIFARRTPMGDGLNMLR 130

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK----DLCKSTDLEKSINKE 170
             + N  +    +  +    +          +L   +         + ++   +  +++ 
Sbjct: 131 PAADNMARNAAVIIVSDGESNFGSDPVAQAQALYESAPGLCLHVVSVAETEAGKAVLDRI 190

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
                  ++ +    +  ++ L    K +      +        V+   T   I++    
Sbjct: 191 AALKGCSVTADAATLLADEQALNGFVKDVFYDTREVKKAPAPAPVVTPETEEVIVLR--- 247

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
              +  F   S+    E   VL +   ++       +++ GHTD++        N +LS 
Sbjct: 248 ---SVQFAFDSAEISNEAEDVLTEAATLIEEHAGKQVTLAGHTDST---GPEAYNQKLSQ 301

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            RA S    L K GV  +RI  + GF     K  ++       NRR++I 
Sbjct: 302 RRAESVKAFLAKEGVDANRIKAV-GFGESEPKFDNNTAEGRKLNRRVEIT 350


>gi|317402977|gb|EFV83516.1| outer membrane protein A [Achromobacter xylosoxidans C54]
          Length = 197

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 91  FFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSI---GTDAYNQKLSERRAAS 147

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G        ++      + NRR++I +   +
Sbjct: 148 VKAYLVSKGIDPNRIYT-EGKGEKNPIASNKTKEGRAQNRRVEIEIVGSR 196


>gi|283853943|ref|ZP_06371147.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283570664|gb|EFC18720.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 357

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K ++ A + +++  +L     S ++ L  +   K +     R  + I+ +D+    
Sbjct: 50  EEERKAELRATELERKAGELQTAYDSLVADLKGEVDSKEIRVRQFREMLEINFVDK---I 106

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
           +F   S+   P    VL K+  VL    +  I + GHTDA P  +     NW LS  R+ 
Sbjct: 107 LFGSGSADISPRGREVLLKVAAVLGKVKDKSIYVVGHTDAQPIHSALYPSNWELSTARSS 166

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  + L +  G++ +R + + G + ++   ++        NRR+DI+V
Sbjct: 167 SVIRFLSETGGLTPERFTAM-GRSFYQPVASNATAEGRQENRRVDIIV 213


>gi|224367491|ref|YP_002601654.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
 gi|223690207|gb|ACN13490.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
          Length = 374

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 114/334 (34%), Gaps = 40/334 (11%)

Query: 39  DFMTVLMAFFLVMWIINATDD-----DTK---KAIEQYFNPFGKNLMTASKGIFDEQNPP 90
           D+++ L  F +++   ++ DD           + I ++ +     L   + G+    + P
Sbjct: 42  DYVSALDNFLIILDASSSMDDRYNGNKKFVTAREIVKHLSQTLPEL-GQNAGLRSFGHSP 100

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL--- 147
           + S +  +     E  T+  ++ K G  ++      +   +       ++   K ++   
Sbjct: 101 KVSDKLTVLFYGMEEYTQKGLNEKSGLVSRAGGTSPMHTALTAAREDLKTFSGKTAVVII 160

Query: 148 -TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK-----KISS 201
                  G  L  + +  +++  +    L           K    ++++A       ++ 
Sbjct: 161 SDGQEAMGLKLPITLEAAQALKNQMGEDLCFYPIFVGDDEKGMHLMEEIANIGKCGFVTK 220

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ---------------RNTPMFDKSSSIPLP 246
               +    + + V         ++                         FD   SI  P
Sbjct: 221 ADKLMTGSGMGQFVQDVFLTKKPMVQAPAPTPIVATPPAVEKAWVVGEAYFDFDKSIIKP 280

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                L K+ +VL       + I+GHTD+       + N  LSL RA +    L+  G+ 
Sbjct: 281 AGFEFLDKVVDVLKSRPALFVKIQGHTDSI---GTRKYNDALSLRRAKAVKTYLINKGID 337

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           ++R+    GFA  +   ++        NRR+++ 
Sbjct: 338 KNRL-SCEGFAFSKPVASNKTAEGRAMNRRVELY 370


>gi|170731810|ref|YP_001763757.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169815052|gb|ACA89635.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 316

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 17/286 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124
             +    G  +     G       P+ +           H T  +       +T  +   
Sbjct: 33  AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAPPPANATPGQVVV 92

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                +    +   Q        T   ++ +    +T    S N ++          K  
Sbjct: 93  GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235
                 +++   +  +      +A ++   +    T + G+ +S  +Q          T 
Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F+  S+   P+  ++L ++   LA        I GHTD          N  LS  RA +
Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
               L+   +   +++  +G    +    +D     + NRRI+  V
Sbjct: 270 VKGYLITKNIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314


>gi|68304102|gb|AAY89709.1| MotB [Escherichia coli LW1655F+]
          Length = 144

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 49/112 (43%)

Query: 3   SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
            +    +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +     
Sbjct: 5   DNRGSMKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKEL 64

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
             I +YF       +T    I + ++P      +      + +   N  +LK
Sbjct: 65  IQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK 116


>gi|299770927|ref|YP_003732953.1| OmpA family protein [Acinetobacter sp. DR1]
 gi|298701015|gb|ADI91580.1| OmpA family protein [Acinetobacter sp. DR1]
          Length = 471

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 80/271 (29%), Gaps = 17/271 (6%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P    L T  KG   E             L  +     ++       T+Q       + +
Sbjct: 213 PASLTLSTDDKGTVSECQAGIGDQGFLATLQTNVKKVFSTTQDCKVDTSQTYAASFTDKD 272

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                          SL    +K           +++  +    +P         +  ++
Sbjct: 273 ALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVGAAPVTAEQ 332

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + +      + L  +  +N+    L +     I+           F   SS    +   
Sbjct: 333 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 382

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L +   +L   T V  ++ GHTD++     A  N  LS  RA +    L   GV   ++
Sbjct: 383 ILDQAATLLNKVTSVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLKSKGVDASKL 439

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               G    +    +        NRRI+  V
Sbjct: 440 VA-EGHGSDQPVAENTTEEGRFKNRRIEFSV 469


>gi|237752179|ref|ZP_04582659.1| cadF [Helicobacter winghamensis ATCC BAA-430]
 gi|229376421|gb|EEO26512.1| cadF [Helicobacter winghamensis ATCC BAA-430]
          Length = 307

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS+  PE    ++   + +  +      I GHTD++        N +LS  RA + 
Sbjct: 201 FPFDSSVVAPEYNAEIKDFAQSMKENPSQTAIISGHTDST---GNDEYNQKLSERRANAV 257

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              +++ GV  +R+    G+   +    +        NRR++
Sbjct: 258 KDAIIEEGVQAERLQA-KGYGESKPIADNATKEGRQENRRVE 298


>gi|254467574|ref|ZP_05080983.1| YceI like family [Rhodobacterales bacterium Y4I]
 gi|206684322|gb|EDZ44806.1| YceI like family [Rhodobacterales bacterium Y4I]
          Length = 327

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
            F          I+ Q  +  F  S++     +   L  + +++     +I  + GHTD+
Sbjct: 204 DFSREACTGRFEILSQGRSVNFAPSTARLDASSRDFLNSLSDIIRRCPGMIVEVGGHTDS 263

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
                 A  N  LS  RA +  Q L K G+  +R+  + G+      + ++     + NR
Sbjct: 264 Q---GKAAWNMALSEKRAAAVNQYLQKKGIPSERLVAV-GYGETTPLVPNNTAQNRAKNR 319

Query: 333 RIDILVED 340
           RI+  V +
Sbjct: 320 RIEFKVLN 327


>gi|330898192|gb|EGH29611.1| outer membrane porin OprF [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 344

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      D E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   +    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|217978313|ref|YP_002362460.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
 gi|217503689|gb|ACK51098.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
          Length = 337

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 121/344 (35%), Gaps = 33/344 (9%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++++   D           + D ++ ++   +++++++         + +     GK+ +
Sbjct: 7   RRRIRQVDYWPG-------FVDALSTMLL--VIIFLLSVFMLAQF-FLAREV--TGKDTV 54

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                   EQ     + +       DE  T  + +L     ++ +    ++        +
Sbjct: 55  LEKLNRQIEQLSALLALERAGKTESDEKATLLASNLDAAQKDKARLQGAIDAKAAGDGGA 114

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
              +         +     +        ++ ++       LS  +    + + ++ DL  
Sbjct: 115 AAQQQLAAEKDASAAALAQIDILNQQIAALRRQLAAIEDALSASEKSGAESQAKIADLGS 174

Query: 198 KISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +++  L+  V +            + +L +     ++      ++  +F+ S ++     
Sbjct: 175 RLNIALAQKVQELARYRSDFFGRLRQILGDRPGVSVVGDRFIFQSEVLFESSQAVLDTAG 234

Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299
              L K+   L             +I + GHTD  P ++     NW LS  RA +  Q L
Sbjct: 235 RAELDKLASALIELEHEIPPDIPWIIRVDGHTDKKPIQSSQYPSNWSLSAARAIAVVQYL 294

Query: 300 MKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           +  GVS  R+   +GF   +       D  N  NRRI++ + ++
Sbjct: 295 VSKGVSPQRL-AAAGFGEFQPLDPGEGDDANRRNRRIELKITEK 337


>gi|153002898|ref|YP_001377223.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152026471|gb|ABS24239.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 510

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 11/185 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D +   N+++         E      +      +        +   + +          +
Sbjct: 333 DGDGVANRDDECPSEQGLAELKGCAAKDGDGDGVPDHQDKCPAEAGSADNEGCPRVVVEK 392

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRN 279
               + + ++     FD   +   PE+  +L +I +VLA   E+  +   GH+D+     
Sbjct: 393 EAKKVELREKVQ---FDTGKATIKPESAGLLDEIAKVLAEHAEITRVVIEGHSDS---SG 446

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            A  N RLS  RA +  + L++ G++++R+S   GF   R   ++D       NRR++I 
Sbjct: 447 GAALNKRLSQARADAVLKALVERGIAKERLSA-KGFGPSRPIASNDTPEGREANRRVEIS 505

Query: 338 VEDRQ 342
           +   +
Sbjct: 506 IAQSE 510


>gi|300779346|ref|ZP_07089204.1| proteobacterial sortase system OmpA family protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300504856|gb|EFK35996.1| proteobacterial sortase system OmpA family protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 229

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I +    +   F   SS         L K+ EVLA++ +  I+I GHTD+   +     N
Sbjct: 104 IKVTMNESIVNFAFDSSNLTSVAQTNLDKLAEVLANNPDTNINIYGHTDS---KGSDDYN 160

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +LS  RA +    L   G++  R+    G        ++D     + NRR++  +   +
Sbjct: 161 LKLSQRRADAVKAYLTGKGIASSRMFT-KGEGEAMPVASNDTEEGRAKNRRVEFAITANE 219


>gi|332968653|gb|EGK07706.1| OmpA family protein [Psychrobacter sp. 1501(2011)]
          Length = 217

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L       GV  +    G +  I+       F   S+   P     L K+  
Sbjct: 73  YMENQKRQLEQQMAGTGVEVKHDGQGNIDLIM--PGNITFAHDSTNINPSFYNTLDKLAS 130

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +    +   ++ GHTD+         N  LS  RA S    L+  GVS  RI  + G+ 
Sbjct: 131 TMNQYNQTTVTVMGHTDSV---GNPTYNQGLSQRRAQSVAGYLVNRGVSGARIQTL-GYG 186

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +    +        NRR++I +   Q
Sbjct: 187 QSQPIADNSTEQGRMQNRRVEIKLNAPQ 214


>gi|254511081|ref|ZP_05123148.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
 gi|221534792|gb|EEE37780.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
          Length = 559

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 90/303 (29%), Gaps = 16/303 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               + +  KA  +            ++                 D    E         
Sbjct: 258 FGEINAEELKAQLKAALDAQTQAQAQAEAQQSLAEERAALLAIARDTLASEQEISTEAQR 317

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +    NQ+    R +            +    +  +    G+DL  +     S  +    
Sbjct: 318 QTALLNQQMSALRNQLGSLQALLDDYEDRNAAAEIQIQTLGQDLNAALARAASEERRRRL 377

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-- 231
                        +            +  L    ++   +       + G+ I       
Sbjct: 378 LEEAERLRLEAEAEELAGQNQELTAQAEDLQRYRSEFFGRLRDVLGDQEGVRIEGDRFVF 437

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI--A 281
            +  +FD  S++   E    + K+  +L             VI + GHTD  P       
Sbjct: 438 SSEVLFDTGSAVLSLEGREEVAKVANILRAVAAEIPEGLNWVIRVDGHTDNVPLAGSGRY 497

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RDNW LS  RA S  + ++ + G+  +R+   +GF   +    +D     + NRRI++ +
Sbjct: 498 RDNWELSQGRALSVVRYMVDALGIPPNRL-AANGFGEFQPVNPADTPDARAQNRRIELKL 556

Query: 339 EDR 341
            +R
Sbjct: 557 TER 559


>gi|94986930|ref|YP_594863.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731179|emb|CAJ54541.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 206

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           R++ +        +  S +    +   +        I + + D+    +F   S    P+
Sbjct: 46  REEMIAAQKNTFDAIRSFITEHALGDNIKATFDNGIITLRLPDE---VLFAPGSEQLTPQ 102

Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304
               L ++ +  L +  + I+I+G+TD S     AR  +NW LS  RA +  + L++ G+
Sbjct: 103 GEKALSQLRDLFLKNREQSINIKGYTDNSSVSEGARFHNNWELSALRAVNVLRKLLQGGI 162

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              R++  +G         +D     + NRR++  +E +
Sbjct: 163 EATRMTA-TGLGDLDPLAPNDTPENRAQNRRVEFTLERK 200


>gi|255264513|ref|ZP_05343855.1| OmpA/MotB [Thalassiobium sp. R2A62]
 gi|255106848|gb|EET49522.1| OmpA/MotB [Thalassiobium sp. R2A62]
          Length = 272

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
            ++  IIIK+K  +    ++ G+WK+ YADF+T +MAFF++MW++NAT ++ +K I  YF
Sbjct: 4   NSNVPIIIKRKKVVSGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTENQRKGIADYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +P       +  G          S     ++      ++    L     ++    Q +E 
Sbjct: 64  SPTIPISRISGGGDGAFGGESVLSKDLLPEVGNLPQPSQAQAQLLGAEQDEISFNQVMEA 123

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  S   +     +         + +  DLE      +   +P    + + AM  +
Sbjct: 124 LTALSGESAVIDRMLRHVITRVTDEGLIIELFDLEDQPLFIDASDVPTGVMQDLTAMIAQ 183



 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 84/204 (41%), Gaps = 5/204 (2%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                ++R S  G        +       E   LP  S+ +   +  ++      + + +
Sbjct: 64  SPTIPISRISGGGDGAFGGESVLSKDLLPEVGNLPQPSQAQAQLLGAEQDEISFNQVMEA 123

Query: 202 TL----SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                    V D +++ V+   T  G++I + D  + P+F  +S +P      +   I +
Sbjct: 124 LTALSGESAVIDRMLRHVITRVTDEGLIIELFDLEDQPLFIDASDVPTGVMQDLTAMIAQ 183

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           ++   +  +++ GH  + P   +   NW +S  RA +   +L ++G    ++++++    
Sbjct: 184 IVGFVSNDLAVEGHVRSQPIVLLKNQNWEISHSRAQAIRLLLQQNGAYPQQMNRVTAHGD 243

Query: 318 HRLKIASDPMNSANRRIDILVEDR 341
              +  + P++  N RI+I+V   
Sbjct: 244 REPQYKN-PLSVRNNRIEIIVLRS 266


>gi|167744038|ref|ZP_02416812.1| hypothetical protein Bpse14_38553 [Burkholderia pseudomallei 14]
          Length = 379

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 227 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 283

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 284 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 342

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 343 PVAPNDSPANRARNRRVEITLMLAPG 368


>gi|167588145|ref|ZP_02380533.1| OmpA/MotB [Burkholderia ubonensis Bu]
          Length = 592

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 82/300 (27%), Gaps = 25/300 (8%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +     P     +    G  D           + D+     +   ++          
Sbjct: 286 FDVLADRRQPAPPWRLFG-AGWIDCGPETGPGKPWERDVRTRIAVAPRALPGSTTPWPLP 344

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +          + S    +     ++   +        + + E    +   +     +  
Sbjct: 345 QPLIEAAPQRAWRSPRIAAVGHAFAIVACAATVAIWGAAKNNEALATRIGEHLARYNAIS 404

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------- 231
                 ++  L+ L                ++          +L  + D           
Sbjct: 405 ATHDAAKRDALRALVADRDQLDRYARTGVPLRLSFGMYHGRNLLSPLNDAIASYEPPSPP 464

Query: 232 ------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
                  +  +FD   +   P++   +    E++         + GHTDA         N
Sbjct: 465 PSVVTLDSMSLFDSGKAALKPDSTRAMVGALELIKAHPGKRILVAGHTDAV---GKPDRN 521

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            +LS+DRA +    L+ + G++  +   I G+   R    +      + NRR++I +   
Sbjct: 522 LKLSVDRAAAVRDWLVDASGIAPTQF-AIQGYGDTRPVADNATPEGRARNRRVEITLVPD 580


>gi|226944839|ref|YP_002799912.1| flagellar motor protein [Azotobacter vinelandii DJ]
 gi|226719766|gb|ACO78937.1| Flagellar motor protein [Azotobacter vinelandii DJ]
          Length = 275

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 8/186 (4%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
             + E+S++      LP  S     A +  +  +D+       L GL  D + K +    
Sbjct: 88  QGNEERSLSPLSEGVLPAGSGLLEQAGRSLRDEKDVDST-GDPLQGLPVDQLGKDIEVIV 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
               +   I    +  +F  + +    + + VLQ++  VL  S   I + GHTD+ P R+
Sbjct: 147 KEGTVSFRI---SSEILFSSAQADLSLDGLRVLQQLVPVLNSSRHDIVVVGHTDSLPIRS 203

Query: 280 IAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                NW LS  RA S  + L  +GV+  R+  + G A  R  + +        NRR+++
Sbjct: 204 TRFPSNWELSGARAGSVVRYLEANGVARQRMRAV-GLADTRPLLENSSPEGRAGNRRVEL 262

Query: 337 LVEDRQ 342
           ++E  Q
Sbjct: 263 ILETPQ 268


>gi|292669789|ref|ZP_06603215.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
 gi|292648586|gb|EFF66558.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
          Length = 304

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 90/229 (39%), Gaps = 12/229 (5%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           ++       L   +F +S +  S+  + +    +                N + +  +  
Sbjct: 23  SDLMTLLLALFIALFAMSQTDASKMQQLAEAFTAAFNMGGPSFFSGMGPSNSQSDASISG 82

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           +       +K    L +  +K+   +      ++   V  E +  G++I + ++    +F
Sbjct: 83  VDNGTGAYLKENADLSEAKEKLEQYIKEH---DLQDQVSTELSEEGLMIRLKER---ALF 136

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296
              S+    +   ++  I  +L+   E ++I GHTD  P        NW LS  RA S  
Sbjct: 137 ASGSAQLQGQAEQIVPVIAALLSSLPERVTISGHTDNVPISTAQFPSNWELSSARAVSLM 196

Query: 297 QVLMKSG--VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + LM +   ++  R S + G++ +R   ++D     + NRR+++ +   
Sbjct: 197 RGLMTAQPTLNPARFSAL-GYSEYRPIASNDTDEGRAQNRRVEVFIARS 244



 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 48/125 (38%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK           +W + Y+D MT+L+A F+ ++ ++ TD    + + + F      
Sbjct: 1   MARKKHGKPHEEELNEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQQLAEAFTAAFNM 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +        N    +S + +D     ++ +N+   +     ++   +    +     
Sbjct: 61  GGPSFFSGMGPSNSQSDASISGVDNGTGAYLKENADLSEAKEKLEQYIKEHDLQDQVSTE 120

Query: 136 NSQQS 140
            S++ 
Sbjct: 121 LSEEG 125


>gi|317051549|ref|YP_004112665.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
 gi|316946633|gb|ADU66109.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
          Length = 252

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 83/217 (38%), Gaps = 5/217 (2%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
             +++  L  +        +     +  + L    D    +N      + P+       +
Sbjct: 21  TFSDLAILLLTFFILLLSMATLDKIKIVQSLGTLRDSLGVLNLGRQTEVSPVPVVVTAQI 80

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  +++Q + + I++  + +    +   V  ++ +    I +       +FD+  +   P
Sbjct: 81  QEVEQIQ-MEEVINAIQAMVQVTGLEDSVEVDSQQDTEGIKVT-LAEEILFDRGRAEIKP 138

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVS 305
               +L ++  ++  S   + I GHTD      +    NW LS  R+ +  +  +++   
Sbjct: 139 AAFPILDQLAAIIHQSKRKVRIEGHTDNVQVPASRYPTNWELSTARSVNVVKYFVQARNL 198

Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           + RI   +G+      + +  +   + NRR++I  E 
Sbjct: 199 DPRIFVAAGYGEFSPVVPNITESNRAKNRRVEIYFEG 235


>gi|4580971|gb|AAD24558.1|AF117966_1 OprF [Pseudomonas mendocina]
          Length = 318

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        E+   ++ + + +    +  + + GHTD+         N  LS  RA + 
Sbjct: 219 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 275

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
             VL+   GV   R++ + G+   R    +  D   + NRR++
Sbjct: 276 RNVLVNQYGVDGSRVNAV-GYGETRPVADNATDSGRAINRRVE 317


>gi|70729207|ref|YP_258943.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68343506|gb|AAY91112.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 270

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 11/234 (4%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            K+   +   +    +      S ++         +    +          E +    E 
Sbjct: 39  QKVKEDSNVLRIAPKDVIRAGESLARADRLSTYWGSGGDVEHYAYLSRRYSEIAREHTEQ 98

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                 + +  L  +R +     AK +S    G   +  +  +    T  G+++++ D  
Sbjct: 99  ALNNERAAKLELERQRLQLALREAKLLSVQQQGKWLEEQIISLATTQTDRGLVMTLGD-- 156

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +         + K+ + L  +   V+ I G+TD +      + N +LS DR
Sbjct: 157 --VLFDTGEAELKNSANRTVLKVVQFLQLNPKRVVRIEGYTDNT---GERQSNLQLSKDR 211

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           A +   VL+  G+ E RI ++ G+       A+      + NRR++I+  D +G
Sbjct: 212 AQAVADVLVDLGIDEKRI-QVEGYGDDYPVEANASERGRAQNRRVEIVFSDEKG 264


>gi|304319913|ref|YP_003853556.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
 gi|303298816|gb|ADM08415.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
          Length = 343

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 118/349 (33%), Gaps = 34/349 (9%)

Query: 19  KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++ +     N        + D   T+L+   ++M++++          EQ          
Sbjct: 3   RRRSYTQGANIWPG----FVDGLSTLLL---VLMFVLSIFVVAQFYLGEQLTRNQQLISE 55

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                          S+   +  +    +++++  L++     +      +  I  L +S
Sbjct: 56  QDDALTRLRAELARLSNDLSLARAEAASLSEDNAALQLDLEVLQDTIAEKDAQIASLGSS 115

Query: 138 QQSEHCKNSLTRD--SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             +   +  + R    E+  ++        ++ ++       L   +   ++++ ++++L
Sbjct: 116 VAASAEELEVERALSEEQKAEIATLNAQLAALRRQLASLQEALEAAEAKDVEQQAQIENL 175

Query: 196 AKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           ++++++ L+  V +       F                           +F   S+   P
Sbjct: 176 SQRLNAALARRVNELARVRSDFLEQLAAALEGRPGFRRDGDRYIVEGDVLFGSCSTELTP 235

Query: 247 ETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNI----ARDNWRLSLDRAYS 294
               VL+ +   +             V+ + GH D  P           N +LS  RA S
Sbjct: 236 AARDVLRTVAAAINDVRRDLDTDYEWVLRVDGHADQVPLGAACRALFDSNLQLSTRRALS 295

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN-SANRRIDILVEDR 341
             + L   GV  DR+    GF      +A  DP + + NRRI+  + +R
Sbjct: 296 VVEFLSSQGVPADRLVAA-GFGDAYPLVAGRDPASLAQNRRIEFKLTER 343


>gi|332969616|gb|EGK08634.1| OmpA family protein [Kingella kingae ATCC 23330]
          Length = 258

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV  E     I +++ +      F        P     L    +
Sbjct: 113 YMDYQETKLREQLANTGVEVERQGNQIKLTMPENVT---FATGRYDLSPAAQSALANAAQ 169

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA   E   +I GHTD++        N  LS +RA +    L + GV+ +R+  +SG  
Sbjct: 170 TLATYNETTITIVGHTDST---GSDAINNPLSYNRANAVASYLNQRGVAANRM-SVSGQG 225

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +    +      + NRR++IL+
Sbjct: 226 SRQPIADNSTDYGRAQNRRVEILI 249


>gi|206562638|ref|YP_002233401.1| OmpA family protein [Burkholderia cenocepacia J2315]
 gi|198038678|emb|CAR54638.1| OmpA family protein [Burkholderia cenocepacia J2315]
          Length = 223

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
           +F+   +  LP++  VL +I + L+   T  I + GHTD+ P  N     NW LS  RA 
Sbjct: 116 LFNVGDARLLPDSSPVLNQIAQALSAHATGDILVEGHTDSVPIANAKYESNWELSSARAG 175

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           S  + L + GV+  R++ I G A  +  +A D     + NRR+ I V
Sbjct: 176 SVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAASRARNRRVTIFV 221



 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          +   +      G W I YAD +T LM  FL ++++         A++  +    +    A
Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69

Query: 80 SKGIFDEQNPPERSS 94
          +  + D         
Sbjct: 70 ATAVVDTAKSDPAPP 84


>gi|119944065|ref|YP_941745.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119862669|gb|ABM02146.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
          Length = 215

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           + + T   ++     KS                  +     A+        +        
Sbjct: 21  RQNATTGEQEMNTATKSAIGGAIAGALAGAATGKKNGALFGAVGGAAIGGGVGYYFDQQE 80

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + L  + +  GV  +      L  I+       FD  +          L  + +VL    
Sbjct: 81  AALRQELLNSGVQVKRVGEYELQLIMADGIG--FDTGNYQLSGSIFSTLNGVAKVLNEYP 138

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              + I GHTD+      +  N  LS  RA S    LM+  V   R+S + G+   R   
Sbjct: 139 KSSLRIIGHTDSV---GSSESNLTLSERRAESVSNYLMQRNVKSGRLSTL-GYGERRPIA 194

Query: 323 ASDP--MNSANRRIDILV 338
            +D     +ANRR++I +
Sbjct: 195 TNDTPYGRAANRRVEINI 212


>gi|325294095|ref|YP_004279959.1| porin [Agrobacterium sp. H13-3]
 gi|325061948|gb|ADY65639.1| porin [Agrobacterium sp. H13-3]
          Length = 220

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     GV        I++++        F       +P     L  + 
Sbjct: 78  NYMDGQESELRAQLQGTGVSVTRRGDSIVLNMPSNIT---FATDQDQVIPPFYQTLDSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I I GHTD++      + N  LS  RA S    L   GV + RIS + GF
Sbjct: 135 IVLNKFNRTLIDINGHTDST---GSQQHNQALSERRAASVANYLGARGVDQRRISTL-GF 190

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR+++L+   +G
Sbjct: 191 GPSQPIASNATPDGRAQNRRVEVLISPLKG 220


>gi|167851058|ref|ZP_02476566.1| hypothetical protein BpseB_37821 [Burkholderia pseudomallei B7210]
          Length = 415

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 263 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 319

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 320 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 378

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 379 PVAPNDSPANRARNRRVEITLMLAPG 404


>gi|313203319|ref|YP_004041976.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312442635|gb|ADQ78991.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 817

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 7/272 (2%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +    +          +    +     + +++ K     K       K    L+++
Sbjct: 543 PDYLDKCPDTPKEAKGFIDSKGCPIDTDGDGVPDYLDKCPDTPKEAKGMVDKNGCLLDSD 602

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              + +         +  +           TD +   +  +     P+     +      
Sbjct: 603 GDGVPDYLDLCPNTPAEAKAFVDKNGCTLDTDGDGVPDYLDKCPNTPIEARGKVDQNGCP 662

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R  D                + +       +  +            F+       P++  
Sbjct: 663 RDTDGDGIPDYLDKCPTIAGVAENEGCPAIKKEVKTLFKKALQGIQFETGKDKIKPKSYP 722

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L +I  V+  +    I +RGHTD       A+ N  LS  RA S  + L+  G+   R+
Sbjct: 723 ILNQIAAVMTANPTYLIEVRGHTDNV---GDAKLNQVLSQKRAESVRKYLIGKGIDSKRM 779

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  +G+        +        NRR++  + 
Sbjct: 780 TA-NGYGDTLPVSTNSTPAGRTLNRRVEFEIT 810


>gi|255264641|ref|ZP_05343983.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
 gi|255106976|gb|EET49650.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
          Length = 223

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 10/137 (7%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            +  ++   V    T + +++S+       +F   SS         L  +   L      
Sbjct: 92  ALRQSLGGNVGITNTGSELIVSLPQD---ILFATDSSTLTGGLQSDLNALANNLNQYPNT 148

Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
             ++ GHTD       A  N  LS  RA +   VL+ +GVS  RI+   G    +    +
Sbjct: 149 TVNVIGHTDNV---GDAGYNDGLSTRRATAVANVLLNAGVSSGRINAF-GRGEAQPIATN 204

Query: 325 --DPMNSANRRIDILVE 339
             D   + NRR++I++ 
Sbjct: 205 LTDEGRAQNRRVEIVIT 221


>gi|239832093|ref|ZP_04680422.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
 gi|239824360|gb|EEQ95928.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
          Length = 260

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 116 NYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSIT---FDTDQDQVKSQFYPTLNSVA 172

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + GHTD++        N  LS  RA S    L   G+   R   + G+
Sbjct: 173 IVLRKFNQTLVDVYGHTDST---GSVSHNQALSQRRAASVASYLGSQGIDPRRF-AVIGY 228

Query: 316 AHHRLKIASDP--MNSANRRIDILV 338
              +    +      + NRR++I +
Sbjct: 229 GASQPVATNATPEGRAQNRRVEIQI 253


>gi|238798865|ref|ZP_04642332.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
           43969]
 gi|238717266|gb|EEQ09115.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
           43969]
          Length = 575

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S+  P +  VL      +       I + GHTD        + N  LSL 
Sbjct: 440 DSLSLFDVGQSMLKPGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQTLSLK 496

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    +  +G   +    + G+   R   ++D       NRR++I +
Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546


>gi|237748606|ref|ZP_04579086.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
 gi|229379968|gb|EEO30059.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
          Length = 217

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 11/150 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             +      + A     GV         I +SI        F   SS   P+   +L+ +
Sbjct: 75  NHMEKQKQEMQAATQGTGVEVVQTENNMIRVSIPSD---VSFATGSSTLSPQFKTILRDL 131

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L ++    I + G+TD +        N  LS  RA S  + L+  GV+ +R   + G
Sbjct: 132 ATTLKNNPSSSIFVVGYTDNT---GSDSVNLPLSRKRAMSVMEYLVSQGVAANRF-TVEG 187

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342
                   ++      + NRR++I V  ++
Sbjct: 188 MGSKDPIASNATAEGRAQNRRVEIYVGQKK 217


>gi|254246487|ref|ZP_04939808.1| OmpA/MotB [Burkholderia cenocepacia PC184]
 gi|124871263|gb|EAY62979.1| OmpA/MotB [Burkholderia cenocepacia PC184]
          Length = 316

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 17/286 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124
             +    G  +     G       P+ +           H T  S       +T  +   
Sbjct: 33  AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGSIAPPPANATPGQVVV 92

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                +    +   Q        T   ++ +    +T    S N ++          K  
Sbjct: 93  GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235
                 +++   +  +      +A ++   +    T + G+ +S  +Q          T 
Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F+  S+   P+  ++L ++   LA        I GHTD          N  LS  RA +
Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
               L+   +   +++  +G    +    +D     + NRRI+  V
Sbjct: 270 VKGYLITKNIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314


>gi|330958963|gb|EGH59223.1| OprF [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 344

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      D E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD + S+  P +   ++ + + +       +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAQVEA 341


>gi|110834388|ref|YP_693247.1| OmpA family protein [Alcanivorax borkumensis SK2]
 gi|110647499|emb|CAL16975.1| OmpA family protein [Alcanivorax borkumensis SK2]
          Length = 362

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA 281
            +L +     N   F+  S+     +  +L ++ + L   T     I GHTD+      A
Sbjct: 245 CLLTNQTITFNNIGFELDSANITASSRPILDRLVKALKSQTNFDVEIAGHTDS---SGSA 301

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             N  LS  RA +  Q L+  G+S +R++   G+       +++     + NRR++  V 
Sbjct: 302 EYNEGLSDRRAKAVRQYLIDQGISSERLTA-RGYGEVVPVASNETASGRAMNRRVEFRVS 360

Query: 340 D 340
           +
Sbjct: 361 E 361


>gi|108524622|ref|YP_619844.1| hypothetical protein pQKH54_47 [Plasmid QKH54]
 gi|99644193|emb|CAJ43326.1| hypothetical protein [Plasmid QKH54]
          Length = 220

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 53/170 (31%), Gaps = 10/170 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P     I A             +    + L       GV  E     + + +     +  
Sbjct: 53  PGQGALIGAAIAGSAGAGYGYYVDKQEAELRESMKGSGVEVEREGDQLKLVM---PGSIT 109

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S   P     L ++        +  + + GHTD+         N  LS  RA S 
Sbjct: 110 FATGKSEIQPSFQYTLNQLAASFRQFQDSDLIVTGHTDSV---GSYEANQVLSARRADSV 166

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            Q L  +GV   R+    G         +D     + NRR++I +  R G
Sbjct: 167 SQFLRSNGVDPSRLQTF-GAGSSSPIAPNDTTEGRAQNRRVEIKLVPRTG 215


>gi|4580966|gb|AAD24553.1|AF117961_1 OprF [Pseudomonas chlororaphis subsp. aureofaciens]
          Length = 325

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            QVL    GV   R+  + G+   R    +        NRR++  VE 
Sbjct: 276 KQVLTSQYGVESSRVQSV-GYGESRPVADNATEAGRAVNRRVEAQVEA 322


>gi|115526365|ref|YP_783276.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520312|gb|ABJ08296.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 270

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 84/216 (38%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             +    +   + S +    +  + R   K              +          +    
Sbjct: 43  STQDVRKLQIFAGSMRDAFGEQFVVRHPGKLPSNAVQPLDRTIDDSAAIEHGQDAAIATK 102

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                ++     A    +         + K ++F+ T   + + I+D  + PMF + S++
Sbjct: 103 QMKAEREFATASASLRRALQDIPELTEVTKNIIFQETSQSLALEIVDHFSRPMFRQGSAV 162

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P   T V+++K+   L  +   ISI GHT ++      RD + LS+ RA +  ++L + G
Sbjct: 163 PYDWTRVLIEKLAVPLKATALRISIVGHTSSTETARGDRDVFELSVLRADAVRRILKQQG 222

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +   ++  ++G        + DP  +ANRR+ I + 
Sbjct: 223 LPTSQLFVVAGKGDREPLFSDDPTMAANRRVTIALM 258



 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 33/97 (34%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           KK     +  + +  W + +AD M ++++FF++M   +  D    +              
Sbjct: 6   KKPKKFPEQDSKIQVWFVTFADLMGLMVSFFVMMLAFSTQDVRKLQIFAGSMRDAFGEQF 65

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                     N  +   +   D +  EH    ++  K
Sbjct: 66  VVRHPGKLPSNAVQPLDRTIDDSAAIEHGQDAAIATK 102


>gi|220934640|ref|YP_002513539.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995950|gb|ACL72552.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 227

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292
            +F  +S+   P+    L ++   LA       I + GHTD +     A  N  LS  RA
Sbjct: 114 ALFAINSAAISPQGRAELDQLVSDLARLDNVQNIHVVGHTDNT---GAADYNMDLSKRRA 170

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            S    L++ G+  D +    G    +   ++      + NRR++I +   +
Sbjct: 171 ESVKAYLVEKGIRAD-LITTEGRGITQPVASNATTEGRAQNRRVEITIRGTE 221


>gi|207723077|ref|YP_002253485.1| chemotaxis motility protein b [Ralstonia solanacearum MolK2]
 gi|206588269|emb|CAQ18823.1| probable chemotaxis motility protein b [Ralstonia solanacearum
           MolK2]
          Length = 171

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +L + T  G+ I I+DQ+N PMF  +S+   P    +L+++G  L      IS+ GHTDA
Sbjct: 1   MLIDMTSEGLRIQIVDQQNRPMFANASAEVEPYMRTILRELGSALNDVPNPISLSGHTDA 60

Query: 275 SPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           + +       NW LS DRA ++ + L+  G+  ++++++ G         +D  N  NRR
Sbjct: 61  TQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFNPINRR 120

Query: 334 IDILVEDRQ 342
           I I+V + +
Sbjct: 121 ISIVVLNNR 129


>gi|148252339|ref|YP_001236924.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146404512|gb|ABQ33018.1| putative outer membrane protein with ompA domain [Bradyrhizobium
           sp. BTAi1]
          Length = 464

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 84/276 (30%), Gaps = 9/276 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           +        L    K   +E   P    Q   D          +V  +           R
Sbjct: 195 EAIAAALAKLPDGFKVASNEVKAPPYIFQAYKDPVAVTVTLSGNVPDENIHAVVVGSSSR 254

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              +   + N + S     +                    +  + +  +   +     A 
Sbjct: 255 KFFSEKVVDNLKNSVGAPANFVNAVVPALGALSRLSTGTLVVSDRDIKISGDALYDAAAG 314

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  L     +     + +        V     +      +   R    F+   S    
Sbjct: 315 QIRTGLAKDVPQGWQVKADITVKPAAAPVDPTVCQQLFADLLGKARIR--FETGRSDLDR 372

Query: 247 ETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           ++  +L ++ E+ +      + I GHTDA      A  N  LS  RA +    L+K+G+ 
Sbjct: 373 DSTGLLDRLVEIAMRCPAANVEIAGHTDAE---GDAAANQALSEKRAQAVVDYLVKAGLP 429

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            +R + + G+   +   ++D     + NRRI+ LV 
Sbjct: 430 AERFTAV-GYGSAQPVASNDTGDGRAQNRRIEFLVR 464


>gi|71736714|ref|YP_274287.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257486264|ref|ZP_05640305.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289627226|ref|ZP_06460180.1| OprF [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650179|ref|ZP_06481522.1| OprF [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298486585|ref|ZP_07004644.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71557267|gb|AAZ36478.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298158911|gb|EFH99972.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320324974|gb|EFW81046.1| OprF [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329128|gb|EFW85126.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330867622|gb|EGH02331.1| OprF [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330881064|gb|EGH15213.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330888250|gb|EGH20911.1| OprF [Pseudomonas syringae pv. mori str. 301020]
 gi|330988403|gb|EGH86506.1| OprF [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331010567|gb|EGH90623.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 344

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|26987858|ref|NP_743283.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24982561|gb|AAN66747.1|AE016303_2 OmpA family protein [Pseudomonas putida KT2440]
          Length = 264

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284
           +  +D     MF   S+   P     LQ + E L   +   + + GHTD+         N
Sbjct: 152 VITLDDNGAVMFAFDSAELTPAAQQRLQGLVEKLNSPTVAKVRVIGHTDSV---GSDSYN 208

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LS  RA S  + L+  G+   +++   G         ++     + NRR+++ +
Sbjct: 209 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 263


>gi|34763480|ref|ZP_00144424.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886853|gb|EAA23981.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 157

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V    +     ++I+    +  FD   S   P+   +L+ I E +  +   I+I GHT
Sbjct: 14  KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L++ G+SEDRI  I      +    +      + 
Sbjct: 74  DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130

Query: 331 NRRIDILVEDRQ 342
           NRR++  +  R+
Sbjct: 131 NRRVEFKLVQRE 142


>gi|313203887|ref|YP_004042544.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312443203|gb|ADQ79559.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 506

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 84/311 (27%), Gaps = 28/311 (9%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +++   +  D     +    +            +     P +       D       T  
Sbjct: 200 LIFSFGSPKDADGDGVSDKLD--KCPNTPKGVEVDAFGCPIDTDGDGVADYLDKCPNTPA 257

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD--LEKSI 167
              +             + + +    N+ +      +       G  +  S D       
Sbjct: 258 GAAVDANGCPLDSDGDGVPDYLDKCPNTPKGIKVDAAGCPLDSDGDGVPDSLDKCPNTPK 317

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
             + N    PL  +         +  D  K +    SG   D    GV     +   +  
Sbjct: 318 GVKVNASGCPLDSDGDGVPDNIDKCPDTPKGVKVDTSGCPIDTDGDGVPDYLDKCPTVPG 377

Query: 228 IIDQRNTP-----------------MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
           I   +  P                  F+    +    +  +L K+ +V+  +      I 
Sbjct: 378 IAANKGCPEVKAETKKIFAQALQGIQFESGKDVIKKSSFAILNKVVKVMNDNPSYNLEIN 437

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           GHTD       A  N  LS  RA +    L K+GV   ++    GF        +     
Sbjct: 438 GHTDNQ---GAAAMNLTLSQKRADAVKAYLTKNGVDAGKL-AAKGFGQTVPVADNATAAG 493

Query: 328 NSANRRIDILV 338
            + NRR++  V
Sbjct: 494 RAKNRRVEFKV 504


>gi|16078432|ref|NP_389251.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309232|ref|ZP_03591079.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313560|ref|ZP_03595365.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318482|ref|ZP_03599776.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322755|ref|ZP_03604049.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321315123|ref|YP_004207410.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
 gi|127250|sp|P28612|MOTB_BACSU RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|143208|gb|AAA22603.1| motility protein B [Bacillus subtilis]
 gi|2633739|emb|CAB13241.1| motility protein B; MotB component of the stator flagellum complex
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021397|gb|ADV96383.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
          Length = 261

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T  +        +    +S   +E        ++     ++    ++L    S     + 
Sbjct: 59  TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIK 118

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266
              +   +  + T  G+LI+I D      FD   +    E + + ++I  +L  +    I
Sbjct: 119 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 175

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            I GHTD  P +N     NW LS+ RA +   +L+++   + ++    G+  ++   ++ 
Sbjct: 176 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 235

Query: 326 PMNSA--NRRIDILVEDR 341
                  NRR+++L+  R
Sbjct: 236 TAEGRSKNRRVEVLILPR 253



 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 4/166 (2%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK    +  +   SW + YAD +T+L+A F+V++  ++ D    + + + FN     
Sbjct: 1   MARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF-- 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             T   G+ D  +     +++     + +   +   + K       ++      +     
Sbjct: 59  --TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKF 116

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +    +      SE      K +    S          PL+KE
Sbjct: 117 IKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKE 162


>gi|297529303|ref|YP_003670578.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
 gi|297252555|gb|ADI26001.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
          Length = 268

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             ++L +  +   S +   ++   +    T  G+ I+I+D     +FD  S+    +   
Sbjct: 106 EKEELKQIQAKIDSYIHQKHLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRR 162

Query: 251 VLQKIGEVL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +  +I  +L  +    I I GHTD  P  N     NW LS+ RA +  +VL+++   + R
Sbjct: 163 LAAEISALLVMNPPRNIMISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPR 222

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
                G+  ++   ++        NRR++IL+  R
Sbjct: 223 YFSAKGYGEYKPIASNATAAGRMKNRRVEILILPR 257


>gi|254475762|ref|ZP_05089148.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214030005|gb|EEB70840.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 219

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 10/209 (4%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             +    +     ++  +    +       +  +                  A+      
Sbjct: 14  AAALGLTACTDPATIGTNGSNTQQGAIIGGIIGAGVGALTNDSDRGLGAATGAIVGAAAG 73

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             +  ++ +    L       G+    T   +++S+ +      F   SS   P     L
Sbjct: 74  SVIGNQLDAQERELRQSISNDGITIVNTGDRLIVSLPNDLT---FATDSSAISPAVRSDL 130

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            K+   L       + + GHTD+      A  N  LS  RA +    +   GV  +R+  
Sbjct: 131 NKVAASLVRYPNSLVQVIGHTDSD---GSASYNQALSERRANAVADQIQAGGVPYNRL-A 186

Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILV 338
           I G    +   ++      + NRR++I+V
Sbjct: 187 IIGRGEDQPVASNLTPEGKARNRRVEIVV 215


>gi|238024505|ref|YP_002908737.1| outer membrane protein [Burkholderia glumae BGR1]
 gi|237879170|gb|ACR31502.1| Outer membrane protein [Burkholderia glumae BGR1]
          Length = 602

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 80/280 (28%), Gaps = 24/280 (8%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                          +  + D+ +   +     +         +          ++S   
Sbjct: 316 GPANAVGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQPLLAAMPRRLWVSPRM 375

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +     +L   +        + + E  +N+         +        ++  L+ L   
Sbjct: 376 TAFAHALALAACAAAVAFWASAKNNEALLNRIGADLGRYSTVPPAHDAAKRDALEALIAD 435

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ----------------RNTPMFDKSSS 242
                        ++          ++ ++ D                  +  +FD   S
Sbjct: 436 RDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPAVVTLDSMSLFDSGRS 495

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P +   +    E++    +    + G+TD          N +LS  RA +    L++
Sbjct: 496 QLKPGSTRAMVGALEMIKAHPDKRILVAGYTDN---SGNPNRNLKLSTARARAVRDWLIE 552

Query: 302 S-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G+   +   I G+   R   ++D     + NRR++I +
Sbjct: 553 ASGIPTTQF-AIQGYGDTRPIASNDTPEGRARNRRVEITL 591


>gi|167002401|ref|ZP_02268191.1| ompA family protein [Burkholderia mallei PRL-20]
 gi|243061889|gb|EES44075.1| ompA family protein [Burkholderia mallei PRL-20]
          Length = 438

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 343 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427


>gi|89093920|ref|ZP_01166865.1| OmpA/MotB [Oceanospirillum sp. MED92]
 gi|89081806|gb|EAR61033.1| OmpA/MotB [Oceanospirillum sp. MED92]
          Length = 265

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 88/225 (39%), Gaps = 12/225 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            ++++   ++      +   +    L  ++    ++ +  +         +       + 
Sbjct: 43  DRFEKAMRSLNDAFQGEDGANSVIELPHEAPVKTEVPEEIEEVLPATNIADAEGEKPQEN 102

Query: 182 KI--LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++ +  L  +A ++S  L   +  ++ +          ++IS+   +   +FD 
Sbjct: 103 EAEFQDIELQTELNRMADEVSQELQAAINSDMAEIGT--PKDGKLVISL---KGDVVFDP 157

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
            S+    E +     I  ++  + +    I GHTD  P +      NW LS  RA +  +
Sbjct: 158 GSAEFHAEMMTTFDSIVLLMKKNPDYKLRINGHTDNIPIQTTRFPSNWDLSAIRATNVLR 217

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +++ G+  +R++  +G+       ++      + NRR++ ++E 
Sbjct: 218 YMVRGGIDLERVTA-TGYGESVPLESNRTLEGRAKNRRLEFVLEK 261


>gi|172058884|ref|YP_001815344.1| OmpA/MotB domain-containing protein [Exiguobacterium sibiricum
           255-15]
 gi|171991405|gb|ACB62327.1| OmpA/MotB domain protein [Exiguobacterium sibiricum 255-15]
          Length = 257

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +       K       +   + +L K        +    + K +  E T  G++ +I D+
Sbjct: 71  SQEEEDSKKTDARTKAQSYEIAELEKIKEEANDYIKQQKLEKDIKVEVTNEGLVFNIRDR 130

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIAR-DNWRLSL 289
               +F  + +    + I + Q +  +L       I + GHTD  P   +    NW LS 
Sbjct: 131 ---ALFSPAQADVKGDAIQIAQGMSNLLVKAGQRQIQVSGHTDNIPINTVQYPSNWELSA 187

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +RA S  + L ++  ++  R   +SG+  ++   ++D     S NRR+++L+ 
Sbjct: 188 ERAISFMRALQRNPKLTPKRF-TVSGYGEYQPIASNDTESGRSQNRRVEVLIR 239



 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +    W I YAD +T+L+A F+V++  +  D    KA+ Q F+        
Sbjct: 2   KRKKKPHDEHISEGWLIPYADLLTLLLALFIVLFASSNVDAVKLKAMSQSFSSVFNGGSG 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
                    +  E  S+     +  +      ++      N   + Q+LE +I  
Sbjct: 62  MITNSSLSTSQEEEDSKKTDARTKAQSYEIAELEKIKEEANDYIKQQKLEKDIKV 116


>gi|326319300|ref|YP_004236972.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323376136|gb|ADX48405.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 296

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               K      +  +  ++ +   +   +  +     + +      +   +       + 
Sbjct: 104 DADIKKAGADAERLRLTSEADRARMQAEANARSAQQAQLQAASAEQRAADNAARVRALEA 163

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
            ++ +  + T  G+L+++ D     +F  + +    +    L K+   L    +    I 
Sbjct: 164 QLRDIEAQQTERGLLVTLGD----VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIE 219

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD+         N  LS  RA +    L++ GV+ DRI+   G+        +     
Sbjct: 220 GHTDSV---GGDAYNQSLSERRAQAVQSALVQRGVAPDRITA-RGYGKTYPVADNSSPEG 275

Query: 328 NSANRRIDILVEDRQG 343
            + NRR++I++ D +G
Sbjct: 276 RAMNRRVEIVIADDKG 291


>gi|83944251|ref|ZP_00956706.1| OmpA family protein [Sulfitobacter sp. EE-36]
 gi|83953292|ref|ZP_00962014.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842260|gb|EAP81428.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
 gi|83844795|gb|EAP82677.1| OmpA family protein [Sulfitobacter sp. EE-36]
          Length = 222

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V+   T   +++++       +F   S+         L  +   +   +
Sbjct: 87  EADLRRQLDSDVIITNTGDRLIVTLPQD---ILFATDSTQVQAGMQNDLAALARNVNVYS 143

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                I GHTD+      A  N +LS  RA +   VL+ +GV   RI  + G    +   
Sbjct: 144 NSTLQIVGHTDSD---GEASYNQQLSEGRARAVANVLVSNGVPGSRIQSV-GRGESQPVA 199

Query: 323 A--SDPMNSANRRIDILVE 339
           +  +    + NRR++I++ 
Sbjct: 200 SNLNAAGKAQNRRVEIVIL 218


>gi|299137972|ref|ZP_07031152.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599902|gb|EFI56060.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 513

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 93/270 (34%), Gaps = 12/270 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +  A K   D         QN   +   +H  +           QK +  R+ +     S
Sbjct: 242 MNHADKYAPDIMQDVATDLQNADTMDSSKHRDQKMEITYAREAVQKAEDARISSLRKQAS 301

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             QQ E       +       +  +    ++                  A   + +    
Sbjct: 302 ERQQQERADKEQAQADAAQSQIAAANANAQAEAAAAAKARAEADAANARAQAAESQHNAQ 361

Query: 196 AKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
             +  +  +   +   +   +    +  G+++++ D     +FD +     P+T V L K
Sbjct: 362 KSEADASAVREKLRAQLNSVLATSESARGLIVNMSD----VLFDTAKFTLKPDTKVSLAK 417

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L       + + G+TD+         N +LS +RA + +  L+++GV    ++   
Sbjct: 418 VATILQLYPGLKVQVEGYTDSV---GGDEYNQKLSENRANAVHDFLVQNGVPAANVTAA- 473

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G+  ++    +      + NRR++++V   
Sbjct: 474 GYGKNKPVADNGTAAGRAQNRRVNLVVSGD 503


>gi|167035288|ref|YP_001670519.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166861776|gb|ABZ00184.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 230

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S+         L  I   L     +  +S+ GHTD+         N +LS  RA+S
Sbjct: 126 FEFDSARLTSSDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 182

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L++SGV       + G    +    +        NRR +I ++ 
Sbjct: 183 VTDYLVESGVPRRSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 230


>gi|290475121|ref|YP_003468005.1| hypothetical protein XBJ1_2106 [Xenorhabdus bovienii SS-2004]
 gi|289174438|emb|CBJ81232.1| Conserved hypothetical protein with OmpA/MotB domains (probable
           component of SST VI cluster) [Xenorhabdus bovienii
           SS-2004]
          Length = 403

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNW 285
           SI+  R   +F+  S+      + V++ I E + +    I + G+TD  P  +     N+
Sbjct: 281 SIVTLRGDGLFNTGSTQIKNNELPVIKHIAETINNIKGEILVIGYTDDVPINSSGFSSNY 340

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            LSL RA S  +   K     +R+ +  G         +D     + NRR++I++ 
Sbjct: 341 ALSLARAKSVKREFEKYLDHPERV-RTEGRGESDPLFPNDTPSHRAKNRRVEIVLL 395


>gi|227536011|ref|ZP_03966060.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244124|gb|EEI94139.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 460

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 92/260 (35%), Gaps = 7/260 (2%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +          + S    ++L    + T +++    G  + K ++  +   + +   S+
Sbjct: 204 GAFVPVGVGVKFKLSEVVALNLGYTMNFTDDNLLYGPGRVDYKGKFSNVYGGLEFTLGSR 263

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             ++   +    +   +    S   E    K+    L     +               K 
Sbjct: 264 DKQNLTFANPVATLYDELKDPSLKNEVEALKQRVSTLEGTVDQLGKDSDGDGVSDKFDKC 323

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            ++  +G V D     + F       + +   Q  +  F+  SS+   E+   L ++ + 
Sbjct: 324 PNTP-AGTVVDGSGCPIKFPEPVVNNITASTGQYGSIQFEFDSSVLKTESYSTLDRLAKE 382

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L  +   +++ G+  A         N  LS DRA +  Q L+ +GV+  +++  +G+   
Sbjct: 383 LRDNNSSVTLDGYASAE---GTEAYNMTLSKDRANAVKQYLVNAGVTAAKVTA-NGYGEA 438

Query: 319 RLKIASDPMNSA--NRRIDI 336
               ++        NRR++I
Sbjct: 439 NPVASNATEEGRIQNRRVEI 458


>gi|157736742|ref|YP_001489425.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
           RM4018]
 gi|157698596|gb|ABV66756.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
           RM4018]
          Length = 338

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+        + +  +V+        +I  HTD+         N +LS  RA SA
Sbjct: 236 FDTDKSVIKDSYNSRINEFAKVMKADPKLKANIEAHTDSV---GTDAYNQKLSERRATSA 292

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
              L+ +GV +DRI  + G+   R   ++D     + NRR++
Sbjct: 293 VNALVAAGVEKDRIKAV-GYGESRPIASNDTVEGRAENRRVE 333


>gi|53716349|ref|YP_105194.1| hypothetical protein BMAA0398 [Burkholderia mallei ATCC 23344]
 gi|53723119|ref|YP_112104.1| hypothetical protein BPSS2105 [Burkholderia pseudomallei K96243]
 gi|67642591|ref|ZP_00441345.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|121596826|ref|YP_991186.1| hypothetical protein BMASAVP1_1592 [Burkholderia mallei SAVP1]
 gi|124382978|ref|YP_001025575.1| hypothetical protein BMA10229_1777 [Burkholderia mallei NCTC 10229]
 gi|126443591|ref|YP_001063957.1| hypothetical protein BURPS668_A2966 [Burkholderia pseudomallei 668]
 gi|126447095|ref|YP_001077649.1| hypothetical protein BMA10247_A0447 [Burkholderia mallei NCTC
           10247]
 gi|126458045|ref|YP_001076870.1| hypothetical protein BURPS1106A_A2841 [Burkholderia pseudomallei
           1106a]
 gi|167821238|ref|ZP_02452918.1| hypothetical protein Bpse9_39318 [Burkholderia pseudomallei 91]
 gi|167829581|ref|ZP_02461052.1| hypothetical protein Bpseu9_38230 [Burkholderia pseudomallei 9]
 gi|167908000|ref|ZP_02495205.1| hypothetical protein BpseN_37601 [Burkholderia pseudomallei NCTC
           13177]
 gi|226193911|ref|ZP_03789512.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237508208|ref|ZP_04520923.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
 gi|242312724|ref|ZP_04811741.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254177324|ref|ZP_04883980.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|254184501|ref|ZP_04891090.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|254194178|ref|ZP_04900610.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|254203138|ref|ZP_04909500.1| ompA family protein [Burkholderia mallei FMH]
 gi|254208472|ref|ZP_04914821.1| ompA family protein [Burkholderia mallei JHU]
 gi|254300798|ref|ZP_04968242.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|254359345|ref|ZP_04975617.1| ompA family protein [Burkholderia mallei 2002721280]
 gi|52213533|emb|CAH39585.1| putative outer membrane porin protein [Burkholderia pseudomallei
           K96243]
 gi|52422319|gb|AAU45889.1| ompA family protein [Burkholderia mallei ATCC 23344]
 gi|121224624|gb|ABM48155.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|126223082|gb|ABN86587.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126231813|gb|ABN95226.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|126239949|gb|ABO03061.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|147746183|gb|EDK53261.1| ompA family protein [Burkholderia mallei FMH]
 gi|147751159|gb|EDK58227.1| ompA family protein [Burkholderia mallei JHU]
 gi|148028532|gb|EDK86492.1| ompA family protein [Burkholderia mallei 2002721280]
 gi|157810991|gb|EDO88161.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|160698364|gb|EDP88334.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|169650929|gb|EDS83622.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|184215093|gb|EDU12074.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|225933856|gb|EEH29842.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|235000413|gb|EEP49837.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
 gi|238523774|gb|EEP87210.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|242135963|gb|EES22366.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|261827068|gb|ABM98527.2| ompA family protein [Burkholderia mallei NCTC 10229]
          Length = 438

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 343 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427


>gi|332284746|ref|YP_004416657.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
 gi|330428699|gb|AEC20033.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
          Length = 192

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   VL ++            I  GHTD+       + N  LS  RA S
Sbjct: 86  FFDFDKSTLKPEGRQVLDQVASQADTINLETLIATGHTDSI---GTEQYNQGLSQRRANS 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  GV+ DRI  + G        ++      + NRR++I +   +
Sbjct: 143 VKDYLVSKGVAADRIY-VEGKGETSPVASNSTREGRAQNRRVEIEIVGTR 191


>gi|153009315|ref|YP_001370530.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561203|gb|ABS14701.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 221

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        FD        +    L  + 
Sbjct: 77  NYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSIT---FDTDQDQVKSQFYPTLNSVA 133

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  + + GHTD++        N  LS  RA S    L   G+   R   + G+
Sbjct: 134 IVLRKFNQTLVDVYGHTDST---GSVSHNQALSQRRAASVASYLGSQGIDPRRF-AVIGY 189

Query: 316 AHHRLKIASDP--MNSANRRIDILV 338
              +    +      + NRR++I +
Sbjct: 190 GASQPVATNATPEGRAQNRRVEIQI 214


>gi|66045337|ref|YP_235178.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256044|gb|AAY37140.1| Thrombospondin type 3 repeat:OmpA/MotB:OmpF [Pseudomonas syringae
           pv. syringae B728a]
 gi|330973748|gb|EGH73814.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 344

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   +    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGETKPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|291483903|dbj|BAI84978.1| flagellar motor protein MotB [Bacillus subtilis subsp. natto
           BEST195]
          Length = 260

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T  +        +    +S   +E        ++     ++    ++L    S     + 
Sbjct: 58  TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIK 117

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266
              +   +  + T  G+LI+I D      FD   +    E + + ++I  +L  +    I
Sbjct: 118 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 174

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            I GHTD  P +N     NW LS+ RA +   +L+++   + ++    G+  ++   ++ 
Sbjct: 175 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 234

Query: 326 PMNSA--NRRIDILVEDR 341
                  NRR+++L+  R
Sbjct: 235 TAEGRSKNRRVEVLILPR 252



 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 4/163 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K    +      SW + YAD +T+L+A F+V++  ++ D    + + + FN       T
Sbjct: 3   RKKKKHEDEQVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF----T 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              G+ D  +     +++     + +   +   + K       ++      +        
Sbjct: 59  GGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIKD 118

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +    +      SE      K +    S          PL+KE
Sbjct: 119 KKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKE 161


>gi|83952523|ref|ZP_00961254.1| OmpA domain protein [Roseovarius nubinhibens ISM]
 gi|83836196|gb|EAP75494.1| OmpA domain protein [Roseovarius nubinhibens ISM]
          Length = 203

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 57/202 (28%), Gaps = 10/202 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +    D                                I           +   + 
Sbjct: 6   AEPAHLQGNDPNARAKQGALIGGVVGAITGAAASDKKGKGAVIGGAIGALGGAAIGNALD 65

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              + L  D     V    T   +++++       +F   SS         L  +   L 
Sbjct: 66  KQAAELERDLNNDSVTVNNTGDRLIVTMPQD---ILFAIDSSTVNSGLRGDLLTVARSLQ 122

Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +    + GHTD +     A  N  LS  RA +   VLM  GV+  RI    G    +
Sbjct: 123 SYPDTTVQVVGHTDNT---GSAAHNQALSERRANAVADVLMNGGVAFSRIQTY-GRGEDQ 178

Query: 320 LKIASDPM--NSANRRIDILVE 339
              ++      + NRR++I++ 
Sbjct: 179 PLASNLTAEGRAQNRRVEIVIL 200


>gi|229588852|ref|YP_002870971.1| hypothetical protein PFLU1321 [Pseudomonas fluorescens SBW25]
 gi|229360718|emb|CAY47576.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
          Length = 231

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+         L  +   L     +  + + GHTD+         N RLS  RA+S
Sbjct: 127 FQFDSAQLTAADKTKLDTVATRLKQEAPSAQLRVSGHTDSV---GKDAYNQRLSEKRAHS 183

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L+ +GV       ++G         +        NRR +I +  
Sbjct: 184 VTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEIQINR 231


>gi|296113910|ref|YP_003627848.1| outer membrane protein CD [Moraxella catarrhalis RH4]
 gi|149757|gb|AAA66180.1| outer membrane protein CD [Moraxella catarrhalis]
 gi|45685720|gb|AAS75593.1| OmpCD [Moraxella catarrhalis O35E]
 gi|295921604|gb|ADG61955.1| outer membrane protein CD [Moraxella catarrhalis RH4]
 gi|326560587|gb|EGE10968.1| outer membrane protein CD [Moraxella catarrhalis 103P14B1]
 gi|326573968|gb|EGE23918.1| outer membrane protein CD [Moraxella catarrhalis O35E]
          Length = 453

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 7/287 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
              AI+ Y          A             S     +L +      N      G    
Sbjct: 156 KVNAIDGYTAEVANGQNIAKDQAVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
              +         L+  + +   + +         +      +            P    
Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239
           E+  A+     +      +   L       +   V        + L+  + Q     FD 
Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             SI  P+    + K+   +        +I GH      R+ AR N RLS  RA +   +
Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L    G++ +R++ + G+   R    +        NRR++ ++   +
Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440


>gi|326565587|gb|EGE15750.1| outer membrane protein CD [Moraxella catarrhalis 12P80B1]
          Length = 449

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 7/287 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
              AI+ Y          A             S     +L +      N      G    
Sbjct: 152 KVNAIDGYTAEVANGQNIAKDQAVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 211

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
              +         L+  + +   + +         +      +            P    
Sbjct: 212 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 270

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239
           E+  A+     +      +   L       +   V        + L+  + Q     FD 
Sbjct: 271 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 330

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             SI  P+    + K+   +        +I GH      R+ AR N RLS  RA +   +
Sbjct: 331 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 390

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L    G++ +R++ + G+   R    +        NRR++ ++   +
Sbjct: 391 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 436


>gi|256823578|ref|YP_003147541.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
 gi|256797117|gb|ACV27773.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
          Length = 377

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +     PE +  + K+ E L         I+GHTD+      +  N  LS  RA S 
Sbjct: 270 FDTNKYEVKPEMVAEIAKVAEFLRQYPSVNAEIQGHTDSV---GSSAYNQGLSERRANSV 326

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L+ + G++  R+S   G+        +        NRR +
Sbjct: 327 KDYLVSNFGINASRLSA-KGYGEEEPIADNSTEEGRALNRRAE 368


>gi|225375333|ref|ZP_03752554.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
           16841]
 gi|225212822|gb|EEG95176.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
           16841]
          Length = 270

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 10/228 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ST   ++++ +  ++    +   S             G    +  D+  +          
Sbjct: 38  STVDAEKFEMVIASLQSSFSILPSGGASIGDGEMVSSGVSQLQMYDIYYNQMANTQTTDD 97

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                 +    +++ L +  +        +    I   V  +     +L+++       +
Sbjct: 98  TSESSDVAEEYKEEALAESEQMAEQVQDLVAQYGIQDQVEIDFNAEYVLLNLN---GAVL 154

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF--RNIARDNWRLSLDRAY 293
           FD   S    E   ++ KIG++L      +I I GHTD  PF   +   +N  LS+ RA 
Sbjct: 155 FDSGKSEIKSEAYPLMDKIGKILQSYQQNMIEIEGHTDNIPFTHSSKYENNDVLSMYRAL 214

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                +   + +    I   SG   +     +      + NRR++I +
Sbjct: 215 YVADYMRNITTIDPSHIKS-SGRGEYVPIADNSTPEGRARNRRVEIKI 261



 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 66/206 (32%), Gaps = 1/206 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   ++ P    +W   ++D M +L+ FF++++ ++  D +  + +          L + 
Sbjct: 3   RKKTEEAPAGAPAWMATFSDLMNLLLCFFVLLFSMSTVDAEKFEMVIASLQSSFSILPSG 62

Query: 80  SKGIFDEQNPPERSSQ-NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              I D +      SQ    D+  ++     + D    S++  ++Y+            Q
Sbjct: 63  GASIGDGEMVSSGVSQLQMYDIYYNQMANTQTTDDTSESSDVAEEYKEEALAESEQMAEQ 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
             +       +D  +     +   L  +     +     +  E    M +  ++    ++
Sbjct: 123 VQDLVAQYGIQDQVEIDFNAEYVLLNLNGAVLFDSGKSEIKSEAYPLMDKIGKILQSYQQ 182

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGI 224
               + G   +              +
Sbjct: 183 NMIEIEGHTDNIPFTHSSKYENNDVL 208


>gi|120553263|ref|YP_957614.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120323112|gb|ABM17427.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 348

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 126/351 (35%), Gaps = 28/351 (7%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-WIINATDDDTKKAIEQYFNPFGK 74
           +I  +     T N    +    +    +++  F+++ +++         +          
Sbjct: 1   MIGSRRRSQSTTNVWPGYVDALS--ALLMLVIFMLLVYVVCQLYLSQTLSDRDNQLARLS 58

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
             +     +   +     + +N+I    D++ T    + ++    +  + Q +       
Sbjct: 59  AQLNELPELLGLEQSKTEALENQIVRLQDDYSTSLKRNDQLIEQLESNREQLMRQTASVE 118

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKS----TDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           + ++Q    + ++    +            ++   S+ ++       L  ++ +  ++++
Sbjct: 119 AQAEQLARMEEAVGEKDQISASQQAMILQLSNQIVSLREQLRQIASALELQQQMTDEKEQ 178

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-----ISIIDQR----NTPMFDKSS 241
            L+ +++++++ L+  V         F      IL     + I+  R    +  +F  +S
Sbjct: 179 ELEQVSRRLNTLLAERVNQLQQYQSEFFARLRDILAGNENVRIVGDRFLLPSELLFASAS 238

Query: 242 SIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN-IARDNWRLSLDRA 292
           +    E    L K+ ++L             ++ I GHTD  P        NW LS  RA
Sbjct: 239 AELGEEGRQELDKLADLLLDVSSRIPDDVDWILRIDGHTDMLPINTQRFPSNWELSTARA 298

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            +  + L   GV E R+   +GF             +   NRRI++ + DR
Sbjct: 299 VAVVRYLATEGVPERRM-AAAGFGEFFPVADGTSPEALQRNRRIELKLTDR 348


>gi|163786823|ref|ZP_02181271.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
           ALC-1]
 gi|159878683|gb|EDP72739.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
           ALC-1]
          Length = 367

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 7/147 (4%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I +     V    +K +  +     I ++ +      +FD   S  L  +   L ++ +
Sbjct: 225 YIDNVSIESVEKKEMKPIKEKIEEPEIKVNEVYTFKNVLFDFDKSELLDVSKGELNQLYK 284

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L  + +  + I GHTD      +   N  LS  RA +    L+  G+   RI +  GF 
Sbjct: 285 HLKENKDLKVKIFGHTDNV---GLEARNKELSKQRAKAVVDYLISQGLDVSRI-QFIGFG 340

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341
             +    +D       NRR++  + D 
Sbjct: 341 SSKPISDNDTDEGRQLNRRVEFKLTDS 367


>gi|28869391|ref|NP_792010.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213968194|ref|ZP_03396339.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|301383801|ref|ZP_07232219.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302060757|ref|ZP_07252298.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
 gi|302131856|ref|ZP_07257846.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28852632|gb|AAO55705.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213927174|gb|EEB60724.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|331018607|gb|EGH98663.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 271

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSAQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
                DN  LS DRA +   VLM  GV + RI ++ G+       A+      + NRR++
Sbjct: 200 -GDREDNLTLSKDRAQAVADVLMDLGVDDKRI-QVEGYGQQFPVDANASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|167916344|ref|ZP_02503435.1| hypothetical protein Bpse112_38087 [Burkholderia pseudomallei 112]
          Length = 421

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 269 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 325

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 326 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 384

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 385 PVAPNDSPANRARNRRVEITLMLAPG 410


>gi|4928701|gb|AAD33691.1|AF136403_3 RpmB [Pseudomonas aeruginosa]
          Length = 146

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +N+Q II+K+        ++ GSWKI +ADF T +MAFFLV+W++++   + KKAI  YF
Sbjct: 2   DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                   +AS  + D    P  +    ++  +      N   +     +Q
Sbjct: 61  QDPIGFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSNESRISPEQDHQ 111


>gi|332668433|ref|YP_004451221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332337247|gb|AEE54348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 501

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 73/280 (26%), Gaps = 16/280 (5%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           K+      G       P+  +   I+          +                 ++    
Sbjct: 226 KDACPTEAGTAATNGCPDTDNDGIINSKDQCPTEAGTAANNGCPDTDNDGIINSKDQCPT 285

Query: 134 LSNSQQSEHCKNSLTRDSE--KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
            +    +  C              D C +     S     +     ++ +       K  
Sbjct: 286 EAGPASNNGCPIRDADGDGVIDANDECPNAAGPASTKGCPDRDSDGIADKNDACPDVKGS 345

Query: 192 LQ-------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           L        D    I S                         ++        F+  S++ 
Sbjct: 346 LANRGCPDTDGDGIIDSADKCPNQPGPASNNGCPEIAQKDRETLTFAARNVQFETGSAVL 405

Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              +  +L ++ ++L   ++    + GHTD          N +LS  RA +    L+  G
Sbjct: 406 KNTSNTILDQVVDILKRYSDYNVRVSGHTDNV---GSDELNLKLSKARAKACTDYLVSKG 462

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  +RI    GF   R    +        NRR +  +  +
Sbjct: 463 IPANRIV-FDGFGESRPVANNATPQGRTQNRRTEFELYQK 501


>gi|262039107|ref|ZP_06012440.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
 gi|261746896|gb|EEY34402.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
          Length = 164

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD +SS+        L  + +VL    +  I + GHTD++        N  LS++
Sbjct: 56  PENITFDTNSSVIKSRFTGSLNSVADVLKKYPDSNIIVSGHTDST---GNDSINNPLSVN 112

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA S    L+ +GV   RI+ + G+       ++      + NRR++I +  +
Sbjct: 113 RAASVKSYLVGAGVPSSRITSV-GYGSKEPIASNSTANGRAQNRRVEIKIVAK 164


>gi|146283087|ref|YP_001173240.1| OmpA family protein [Pseudomonas stutzeri A1501]
 gi|145571292|gb|ABP80398.1| OmpA family protein [Pseudomonas stutzeri A1501]
 gi|327481439|gb|AEA84749.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
          Length = 260

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 11/214 (5%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             L+  +  +        +     D  + T  + +   +    L   +     A +   +
Sbjct: 45  SKLAALETQDAGNMLDKANKAYLNDADEKTVDQLAYLTKRRIELAEQTIALRSAEEELGK 104

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                 +            + + +  + T  G L++  D     +FD   +   P  +  
Sbjct: 105 TSAQRAEARLEAREAQIRKLQEDMQAKQTERGTLVTFGD----VLFDYDRAELKPGGMRS 160

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +QK+ + L  + E    + G+TD++     A  N RLS  RA +    L+K GV   RI 
Sbjct: 161 VQKLADFLNDNPERKVIVEGYTDST---GSAEYNQRLSERRADAVRMALVKMGVDPQRIV 217

Query: 311 KISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              G+       ++      + NRR+++ + D  
Sbjct: 218 S-QGYGKEYPVASNSDSAGRAMNRRVEVTISDDN 250


>gi|77457293|ref|YP_346798.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77381296|gb|ABA72809.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 264

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 11/238 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
               +  +          +       ++  +  +        D         +   + + 
Sbjct: 21  STPPNPNLEQARTNYAGLQANPQASKVAALETKDASDYLDKADKAYLDKEDAAKVDQLAY 80

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +   +   +     A    K       +            +   +  + T  G L++
Sbjct: 81  LTNQRVEVAKQTIALRTAENNLKNAAAQRAQARLDARDQQIKQLQDSLNAKQTDRGTLVT 140

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
             D     +F  + +      +V + K+ + L  + +    + G+TD++     A  N  
Sbjct: 141 FGD----VLFATNKADLKSSGLVNINKLAQFLQENPDRKVIVEGYTDST---GSASYNQS 193

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           LS  RA S    L+K GV   RI  + G+        +      + NRR+++ + +  
Sbjct: 194 LSERRATSVQVALIKMGVDPSRIV-VQGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250


>gi|311697206|gb|ADQ00078.1| secreted protein containing outer membrane protein, OmpA/MotB,
           C-terminal domain [marine bacterium HP15]
          Length = 366

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 98/297 (32%), Gaps = 21/297 (7%)

Query: 48  FLVMWIINATDDDTKKA--IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
           F V+   +  + +T+      + F       +   K       P   +  +  D+ +D+ 
Sbjct: 72  FSVLLQGSYAEPETRTQNLDTELFRGSLGARLHPGKFRLGGWRPFGGAGYSYTDIDVDQG 131

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
             K    + +    Q+    R        + ++  E   +             +     K
Sbjct: 132 GGKTEDAIYLEGGFQRMVAPRFMIETGVRARTELEEGYVDGQYFAGIHYLFGREFPAAPK 191

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            +   +    P +             + DL K   + +  LV  +     L +  +  + 
Sbjct: 192 PVVAVQPKPEPVVRPPMDTDGDGV--IDDLDKCPDTPMGALVDSDGCPKELTKDIKETLY 249

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
           +          FD   +   P+    + ++ +VL        +  GHTD++     A  N
Sbjct: 250 VE---------FDLDKTEVKPQFYPEIGELAKVLKQYPTSTILLEGHTDST---GSASYN 297

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            +LS  RA +  +VL+    +   RIS  +G    +   ++      + NRR++ +V
Sbjct: 298 QQLSKSRADAVMKVLIDRFSIPSTRIST-TGMGESQPIASNATVEGRAQNRRVEAIV 353


>gi|167725111|ref|ZP_02408347.1| hypothetical protein BpseD_39196 [Burkholderia pseudomallei DM98]
          Length = 407

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 311

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 312 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 370

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 371 PVAPNDSPANRARNRRVEITLMLAPG 396


>gi|170722426|ref|YP_001750114.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169760429|gb|ACA73745.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 576

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 9/220 (4%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +  +S+++Q+      +T D  +      S D +K   ++E   +     +++    R+
Sbjct: 338 CVALISSARQNTLLIRQVTDDLRRYSTASLSPDSDKVSQRQEALMVLRQDAQRLDHYYRQ 397

Query: 190 KRLQDLAKKI---SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                L   +         L+A      +             +   +  +F+  S+   P
Sbjct: 398 GEPWSLGIGLYQGERLRPSLLAAISGYRIPAMPQGVPDKPRTVRLDSLSLFNSGSAQLKP 457

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           E+   L      +      + +  GHTDA+        N RLS  RA + +  +   G  
Sbjct: 458 ESTKFLVNAFAGIKAQPGWLIVITGHTDAT---GSDEQNLRLSRARAAAVHDWIQHMGDI 514

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
            +    + G        ++D       NRR++I +    G
Sbjct: 515 PNNCFAVQGLGASEPVASNDTEQGRSTNRRVEIRLVPEAG 554


>gi|110636904|ref|YP_677111.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279585|gb|ABG57771.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 620

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 98/305 (32%), Gaps = 31/305 (10%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQN--------------PPERSSQNKIDLSIDEHIT 107
                 Y +P GK L  +SKG                        +  + ++ + D+   
Sbjct: 320 FDEDAPYMHPDGKTLYFSSKGHSTMGGYDVFKTTKLANGVWSTPENMGSPVNTAGDDVYF 379

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
             S D KIG  +  K+    + +I+ +         + +L +         K T+   +I
Sbjct: 380 VLSADGKIGYYSSNKEGGFGKQDIYSIRMPAAENEPELALLKGKILDDQTGKPTEASITI 439

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISST-----LSGLVADNIVKGVLFET 219
                  +    +      +    L         I           +  +N      ++ 
Sbjct: 440 TDNATKEIVARYRSNSETGEYLLSLPAGKNYGIAIEKEGHLFYSENMTLNNTNGFKEYKQ 499

Query: 220 TRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
             T + I    +       FD   +    E+   L K+ ++L ++    I I GHTD   
Sbjct: 500 DITLVTIKTSGKIILRNIFFDSGKATIRLESTAELLKLVDLLKNNPTLRIEIAGHTDNI- 558

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRI 334
                  N +LS +RA +    L  +G+S  R+    G+   +    +  D     NRR 
Sbjct: 559 --GDETLNQKLSEERAKNVVTFLTANGISAGRLVA-KGYGSSQPVAPNTTDTGRQQNRRT 615

Query: 335 DILVE 339
           +I + 
Sbjct: 616 EIKIL 620


>gi|254253396|ref|ZP_04946714.1| Outer membrane protein [Burkholderia dolosa AUO158]
 gi|124896005|gb|EAY69885.1| Outer membrane protein [Burkholderia dolosa AUO158]
          Length = 317

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 14/269 (5%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A+  +         ++   +       IT    +   G      +          L   +
Sbjct: 52  ATAALPAPNAGAPGTASGTVVRGTAGTITPPPANAVPGQVVVGGKVPDEATKAAVLQKLR 111

Query: 139 QSEHCKNSLT----RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            +    N +      D     +   +         ++            + MK +   + 
Sbjct: 112 DTYGAANVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEA 171

Query: 195 LAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             ++I+S ++        I   +    +  G+L   +  R    F+  S+   P+   +L
Sbjct: 172 QRQQIASDMANTLNPTYTIKNALRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQIL 230

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++   L+        I GHTD          N  LS  RA +    L+  G+   +++ 
Sbjct: 231 DQMAAALSKLQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKGIPPQQMTT 287

Query: 312 ISGFAHHRLKIASD--PMNSANRRIDILV 338
            +G    +    +D     + NRRI+  V
Sbjct: 288 -TGVGPDQPIAPNDMAEGRARNRRIEFRV 315


>gi|304321111|ref|YP_003854754.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
           HTCC2503]
 gi|303300013|gb|ADM09612.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
           HTCC2503]
          Length = 231

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 10/195 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            EK  +  +   L                     A         +   +      L  + 
Sbjct: 43  EEKVSNTARGAGLGALAGGVIGAIAGDDEAALAGAAAGAALGGGIGAYMDRQEQELRREL 102

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269
              GV  +     I + +        F    +   PE    L  + +V+    +    + 
Sbjct: 103 ASTGVRVQRVGNDIRLIM---PGNITFATGQASVRPEFYATLNSVAKVIERYQQTAVLVE 159

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM 327
           GHTD+         N +LS+ RA S    L   GV+  RI  I G+   +   ++  D  
Sbjct: 160 GHTDSV---GTEDSNVQLSIARAESVGNYLAAQGVAVPRIRAI-GYGESQPVASNGTDSG 215

Query: 328 NSANRRIDILVEDRQ 342
              NRR++I +   Q
Sbjct: 216 RQQNRRVEIQLSPTQ 230


>gi|332298234|ref|YP_004440156.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
 gi|332181337|gb|AEE17025.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
          Length = 236

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
           ++ + L   +   +S    D     +   +   G++I++        F   S+     ET
Sbjct: 79  EKGKSLGLSVKRAVSLFAPDVKSNKITLSSDERGLVITLASD---SFFAPGSAALNIEET 135

Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304
              + ++ + L+          I GHTD +P  +     NW LS  RA +    L   GV
Sbjct: 136 RATVLRLAQFLSSKELSGRRFRIEGHTDGTPVASKDFPSNWELSAARAVNVLHYLSDFGV 195

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +E +   ++G+A  R K ++D       NRR+DI++ D
Sbjct: 196 NEAQF-SVAGYADTRPKFSNDTAEGRAYNRRVDIIILD 232



 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +      +W   Y D +T+++ FF++++     D     A+     
Sbjct: 3  RKEPEKPSTAWMGTYGDMITLMLCFFVMLYNPTEVDAVQMAALTASLQ 50


>gi|114776523|ref|ZP_01451568.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
 gi|114553353|gb|EAU55751.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
          Length = 223

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 10/155 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +       +    +           V+   T   + +++        F   S+    +  
Sbjct: 73  ETAVQYLDRQEKAVRLSKDATAGNIVVQRETPQALKLTLSRDAA---FASGSNELSEQGK 129

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L  +  +L       ++I GHTD++     A  N  LS  RA +    ++  GVS DR
Sbjct: 130 QTLDDVATLLKRYKKTRLTITGHTDST---GTALFNQSLSERRALAVASYMISKGVSADR 186

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           I+  SG         +D     + NRR++IL+   
Sbjct: 187 IAS-SGMGESSPAYPNDSAANRAKNRRVEILITTP 220


>gi|88811406|ref|ZP_01126661.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
 gi|88791295|gb|EAR22407.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
          Length = 439

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 14/299 (4%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
             D DT + + +        L++  +    + +     ++    L  +           +
Sbjct: 142 QADIDTLRKVRETLEAKVGELVSHLEHSRGQLSAARDRTKALEALLAEAQERTQLAQKTL 201

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
              + + Q    +      + + Q      +  +     + L    +   ++    +   
Sbjct: 202 QHRDIRIQDLVAQIEERQEALAHQHRLSAAADAKLGALRRQLQALQEQISALAAALHSSK 261

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRN 233
             +  +K+   +  ++L     K    LS   ++   +          I +       ++
Sbjct: 262 QTVVSQKVQLRRLGEQLNVALVKKVKELSYYRSEFFGRLRQVLGDVPEIRVVGDRFMFQS 321

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRNIAR-DN 284
              F   S+         L ++  VL             V+ + GHTD  P        N
Sbjct: 322 ELFFPSGSAQIAAPGKDKLDRLATVLEEVSRRIPGDVDWVLQVDGHTDRRPIHTPRFPSN 381

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           W LS  RA S    L+  GV  +R+   +G+  +    + D     + NRRI++ +  R
Sbjct: 382 WELSTARALSIVHYLVTRGVPPNRL-AAAGYGQYDPIDSRDSPQALARNRRIELRLTSR 439


>gi|70728655|ref|YP_258404.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68342954|gb|AAY90560.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 229

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+         L  I   L    S+  + + GHTD+         N +LS  RA+S
Sbjct: 125 FHFDSAKLTDADKTKLNTIVTRLKQEASSAQLRVTGHTDSV---GSDAYNQKLSDKRAHS 181

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             + L+ +G+       ++G    +    +        NRR +I +  
Sbjct: 182 VVEYLISNGIPRSSFVSVTGAGESKPVADNKTAEGRAMNRRTEIQINR 229


>gi|260432828|ref|ZP_05786799.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416656|gb|EEX09915.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 580

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 78/220 (35%), Gaps = 16/220 (7%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
               E    +  +    G+DL  +     S  +                 ++        
Sbjct: 362 DDYKERNAEAEVQIQTLGQDLNAALARAASEERRRRLLEEAERIRLEAEAEKLAGQNQQL 421

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254
            K +  L    ++   +       + G+ I        +  +FD  S++   E    + K
Sbjct: 422 AKQAEDLQRYRSEFFGRLRDVLGDQEGVRIEGDRFVFSSEVLFDPGSAVLSDEGKREIAK 481

Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-G 303
           + E+L             VI + GHTD  P       RDNW LS  RA S  + +++  G
Sbjct: 482 VAEILRSVAAEIPPELNWVIRVDGHTDNIPVSGAGRYRDNWELSQGRALSVVRYMVEELG 541

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +  +R+   +GF   +    +D     + NRRI++ + +R
Sbjct: 542 IPPNRL-AANGFGEFQPVDTADTPEARAKNRRIELKLTER 580


>gi|115372711|ref|ZP_01460017.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310823482|ref|YP_003955840.1| thrombospondin type 3 repeat protein, outer membrane
            domain-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|115370192|gb|EAU69121.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309396554|gb|ADO74013.1| Thrombospondin type 3 repeat protein, outer membrane domain protein
            [Stigmatella aurantiaca DW4/3-1]
          Length = 5149

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 13/282 (4%)

Query: 63   KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
            +       P  K ++           P        +D   DE    +  +   G  +   
Sbjct: 4862 ERKAPSPKPEEKPVVEPVAVPQQAPAPVCPQGPEDMDGFQDEDGCADPDNDGDGILDASD 4921

Query: 123  QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL-EKSINKEENYFLPPLSKE 181
            +            +                 G  L    D        ++ +       +
Sbjct: 4922 KCPNAPETKNGFQDEDGCPDEAPPPPPVDTDGDGLTDDVDRCPNEPEDKDGFRDEDGCPD 4981

Query: 182  KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKS 240
                        D       T++G+  ++        +       I I+D+     F   
Sbjct: 4982 PDNDQDGIADASDKCPNQPETINGVTDEDGCPDKGKVKVLVEREKIVILDK---IFFTSK 5038

Query: 241  SSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
              + LP++  +L+++ +VL    E+  + + G+TD         +N RLS  RA +  + 
Sbjct: 5039 MDVILPKSFSLLKQVAQVLKAHPEIEKVRVEGYTDDQ---GPDEENLRLSERRAKAVLER 5095

Query: 299  LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            L++ GV+ +R+  + GF   R   ++        NRR++  V
Sbjct: 5096 LVQEGVAAERLDSV-GFGEARPVASNKTSKGRDANRRVEFSV 5136


>gi|15889974|ref|NP_355655.1| porin [Agrobacterium tumefaciens str. C58]
 gi|15157937|gb|AAK88440.1| porin [Agrobacterium tumefaciens str. C58]
          Length = 220

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     GV        I++++        F       +P     L  + 
Sbjct: 78  NYMDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNIT---FATDQDQVIPPFYQTLDSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I I GHTD++      + N  LS  RA S    L   GV + RIS + GF
Sbjct: 135 IVLNKFNRTLIDINGHTDST---GSLQHNQALSERRAASVANYLGARGVDQRRISTL-GF 190

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +   ++      + NRR+++L+   +G
Sbjct: 191 GPSQPIASNATSDGRAQNRRVEVLISPLKG 220


>gi|262197986|ref|YP_003269195.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081333|gb|ACY17302.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 1755

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 76/240 (31%), Gaps = 14/240 (5%)

Query: 110  SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
              + +  +  +       E       N         ++  D +   D     D +   + 
Sbjct: 1513 PEEAETFNQFEDSDGCPDELLDSDGDNIFDHLDECPTVAEDLDGFMDEDGCPDADNDGDG 1572

Query: 170  EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
              +     +++   +  +           I   L     +     V  +      L+ I 
Sbjct: 1573 VLDQADGCMNEAGPIENRGCPDADRDGDTIVDRLDNCPDE--AGPVENQGCVKEQLVQIT 1630

Query: 230  DQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD 283
            D +   +    F+   +     +  +L  + +VL    E+ ++   GHTD          
Sbjct: 1631 DNQIIILDRVYFETDKARIRSRSFALLNNVVQVLEAHPEIANVRIEGHTDDR---GSDAY 1687

Query: 284  NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            N  LS  RA S    L+++GV   R+  + G+   R    +      +ANRR++  +   
Sbjct: 1688 NLDLSDRRAASVVSFLIEAGVDPVRLQSV-GYGETRPVRENGSREGRAANRRVEFHIVRD 1746


>gi|302185648|ref|ZP_07262321.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. syringae 642]
          Length = 344

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   +    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGETKPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|149203135|ref|ZP_01880106.1| OmpA/MotB [Roseovarius sp. TM1035]
 gi|149143681|gb|EDM31717.1| OmpA/MotB [Roseovarius sp. TM1035]
          Length = 210

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V    T   +++++       +F    +   P     L K+ + L    
Sbjct: 76  EAELRQQLDGDVRIVNTGDRLILTMPQD---ILFPVDGATVAPALRDDLFKVSQSLQAYP 132

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                + GHTD+      A  N  LSL RA +   VL   GV   R+  I G    +   
Sbjct: 133 NTTVQVVGHTDSD---GDAGYNQGLSLRRANAVADVLASGGVPYARLRAI-GRGEDQPVA 188

Query: 323 ASDPMN--SANRRIDILVE 339
           ++      + NRR++I++ 
Sbjct: 189 SNLTSEGKAQNRRVEIVIL 207


>gi|330951777|gb|EGH52037.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae Cit 7]
          Length = 344

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV  +R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGANRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|227538390|ref|ZP_03968439.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241772|gb|EEI91787.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 438

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 14/214 (6%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           S    S     +   +    K      + E  +                L       + +
Sbjct: 228 SKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNADLKDDDGDGVAN 287

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246
              K  +T SG   D     +    T+    I + +     +        FD   S   P
Sbjct: 288 KYDKCPNTPSGTKVDGAGCPLPVAETKVVEKIVVTEADKKVVDEAIKDLEFDLGKSTIRP 347

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +   L ++  +L      + + GHTD +      + N RLS +RA +    L   G + 
Sbjct: 348 TSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMQTNLRLSKERAEAVKAYLTSKGANP 404

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RI   +G+  ++    +        NRR++  +
Sbjct: 405 SRIEA-TGYGPNQPIATNATAEGRQQNRRVEFTL 437


>gi|49083000|gb|AAT50900.1| PA3692 [synthetic construct]
          Length = 262

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 13/239 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            T  + +L+   +N      +          ++ +        +  + G+D      L  
Sbjct: 21  STPPNANLEQARSNFSALQSQPGATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        +      A  +    Q    ++ +  + L  D +   +  + T  G +
Sbjct: 81  LTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD   S   P  +  +Q++ E L  + E    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RLS  RA S    L+  G+S +R+    G+       ++      + NRR+++ + + 
Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249


>gi|149197358|ref|ZP_01874409.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
 gi|149139376|gb|EDM27778.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
          Length = 265

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 13/240 (5%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            +    +   +Q KQ +    +       Q+S    +  T++ E+ +         K   
Sbjct: 17  GTAGWLLWENDQLKQNKAQLESERTELLEQKSGLEDHLSTKEKEQIELSQALDQEIKKQE 76

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                    L + K    + K+ +  L  K+   L   +          +       IS+
Sbjct: 77  ALIEAHQQTLDEFKRSVEEEKEEMSTLHSKLVEELQNEITSR-----EIKLKELNGRISL 131

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI--ARDNW 285
               N  +F   ++        VL KI + L+ +T+ I  + GHTD  P       ++NW
Sbjct: 132 S-MENKILFPSGTANLGDRGTEVLNKISDALSETTDHIIRVEGHTDNVPLSGKGLYKNNW 190

Query: 286 RLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            LS  RA S  + +L+   ++   I  ++          +      + NRRI+I +  + 
Sbjct: 191 ELSAARALSVVKELLITQQLNSKDIEAVA-MGEFHPVADNTTKDGRAQNRRIEIYLSPKP 249


>gi|88798562|ref|ZP_01114146.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Reinekea sp. MED297]
 gi|88778662|gb|EAR09853.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Reinekea sp. MED297]
          Length = 224

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 9/172 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                   +  I A         +   +      L  + +  GV  + T  G +  I+  
Sbjct: 55  APKEERAKRAIIGAGIGGVAGGGVGYYMDQQEKELRDELVGTGVQVKRTEEGQIDLIM-- 112

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
                FD +SS      I  L+ + +VL       ++I GHTD+         N  LS  
Sbjct: 113 PGNITFDVNSSTVADGFIPTLRSVAKVLKEYENTLVTISGHTDS---SGSEDYNQLLSEQ 169

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA S   ++++ G+  +R+   +G+   +   ++D     + NRR++I ++ 
Sbjct: 170 RATSVANIILQEGIVVERV-AAAGYGELQPIASNDTPEGRAENRRVEITLDA 220


>gi|146307120|ref|YP_001187585.1| OmpF family protein [Pseudomonas mendocina ymp]
 gi|145575321|gb|ABP84853.1| OmpF family protein [Pseudomonas mendocina ymp]
          Length = 327

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        E+   ++ + + +    +  + + GHTD+         N  LS  RA + 
Sbjct: 220 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 276

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
             VL+   GV  +R++ + G+   R    +  D   + NRR++  VE 
Sbjct: 277 RNVLVNQYGVDGNRVNAV-GYGETRPVADNATDSGRAINRRVEAEVEA 323


>gi|225024888|ref|ZP_03714080.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
           23834]
 gi|224942346|gb|EEG23555.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
           23834]
          Length = 219

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 10/158 (6%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A+        +   +    + L  +     V  +     I +++    +   F  +SS 
Sbjct: 60  AALGCGVVGAGVGAYMDVQENRLRQELANTPVEVQRQGDQIKLTM---PSGVTFATNSSS 116

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+ +  L  +  VL    E   ++ GHTD +      R N  LS +RA S    L   
Sbjct: 117 LSPDAVNSLNTVANVLTQYPETTITVAGHTDNT---GNDRINNPLSKNRARSVAGYLTGR 173

Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           GV+  RIS + G+        +      + NRR++IL+
Sbjct: 174 GVAASRISTV-GYGSRSPVADNSTESGRAQNRRVEILI 210


>gi|227824113|ref|YP_002828086.1| putative outer membrane protein, OmpA/MotB domain protein
           [Sinorhizobium fredii NGR234]
 gi|227343115|gb|ACP27333.1| putative outer membrane protein, OmpA/MotB domain protein
           [Sinorhizobium fredii NGR234]
          Length = 221

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     G+        I++++        F       +P     L  + 
Sbjct: 78  NYMDQQESELRAQLQGTGISVTRQGDRIILNMPSNIT---FATDRDQVIPPFYPTLDSVA 134

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL    +  I + GHTD++     A  N  LS  RA S    L   G+ + RIS + G+
Sbjct: 135 IVLRKYNKTLIDVDGHTDST---GSAAHNQDLSERRAASVANYLGSRGIDQRRISTM-GY 190

Query: 316 AHHRLKIASDPM--NSANRRIDILVED-RQG 343
              R   ++      + NRR++I +   +QG
Sbjct: 191 GMERPVASNSSEAGRAQNRRVEISIAPIKQG 221


>gi|224582121|ref|YP_002635919.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224466648|gb|ACN44478.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 434

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|162448339|ref|YP_001610706.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
 gi|161158921|emb|CAN90226.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
          Length = 608

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 76/280 (27%), Gaps = 14/280 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P    + +          P +      +D                          R ++ 
Sbjct: 331 PHTAGVRSPDPTKNGCPPPKDADHDGILDAVDACPAVAGVASPDPKKNGCPPPGDRDKDG 390

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I         E    +     + G       D +   +  +     P       A     
Sbjct: 391 ITD-DVDACPEQAGPANDDPKQHGCPPPPDRDGDTVPDASDACPDLPGLVTTDPATNGCP 449

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLP 246
              D    I         +              + + + +     +    FD   +   P
Sbjct: 450 GDTD-GDGIRDDKDACPNEKGKPNEDPTQNGCPVAVRVTETEIVILQQVQFDTGKATIRP 508

Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            +  +L ++  VL    E++ I   GHTD        + N +LS  RA S  + L++ G+
Sbjct: 509 VSNELLDEVAGVLKDHPEILKIEVQGHTDDR---GTRQFNTKLSQARAESVLKALVERGI 565

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +  R+    G+        +        NRR+   + +++
Sbjct: 566 AAQRLQA-KGYGPDVPIAENKTEAGRQKNRRVQFNIIEKE 604


>gi|330503542|ref|YP_004380411.1| OmpF family protein [Pseudomonas mendocina NK-01]
 gi|328917828|gb|AEB58659.1| OmpF family protein [Pseudomonas mendocina NK-01]
          Length = 326

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        E+   ++ + + +    +  + + GHTD+         N  LS  RA + 
Sbjct: 219 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 275

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
             VL+   GV   R++ + G+   R    +  D   + NRR++  VE 
Sbjct: 276 RNVLVNQYGVDGSRVNAV-GYGETRPVADNATDSGRAINRRVEAEVEA 322


>gi|320354327|ref|YP_004195666.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122829|gb|ADW18375.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 248

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 80/244 (32%), Gaps = 13/244 (5%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
           + +        L +           L      L      +  K    + S K     ++T
Sbjct: 1   MAKEPECPPPGLPMWMATYSDLVTLLLTFFVLLLTMASMDPTKFEQAKTSIKDAFGWRTT 60

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
                 +       P      I       R + +   +         +        +   
Sbjct: 61  AAPVPFSLPILPSPPKAKFTPIPRETAVPRFKRIKNDLELAKLQAQVEA------VQQDN 114

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             I++ I +     +FD+  +   P +  +L+K+ +++      + I GHTD++P     
Sbjct: 115 DSIILRIHES---VLFDEGQATLNPASYPILRKVADIIRPLPMSMRIEGHTDSTPMAGAT 171

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             NW LS+ RA +      +  +   DR+S   G+   R    +   +  + NRR+D ++
Sbjct: 172 TSNWDLSVARAVAVMSFYHRGELFALDRMSAA-GYGDTRPLAPNTTKDNMAKNRRVDFVL 230

Query: 339 EDRQ 342
              +
Sbjct: 231 RSNR 234


>gi|297181726|gb|ADI17907.1| flagellar motor protein [uncultured Desulfobacterales bacterium
           HF0200_07G10]
          Length = 524

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVK-GVLFETTRTGILISIIDQRNTPMFDK 239
           E + A++ ++RL++L    S  +   ++    +  +  +T+++ +++ +       +F  
Sbjct: 362 EALNAVEVQERLENLEMTKSDDIMSEISGMAEEADLDVDTSKSKVIVRV---PGASLFKP 418

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
           + +        VL  +   +    +    ++GHTD  P        NW LS  RA +  +
Sbjct: 419 AQATLQLSARPVLDAVINTVNKYPDYKIHVQGHTDDDPISTAMFPTNWELSAARATAVLR 478

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             +  G   +R++  +G+A     ++++     + NRR++ ++E  +
Sbjct: 479 YFIDKGADPERMTA-TGYADIFPLVSNETPYGRAKNRRVEFVLEKEK 524



 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
                  W   ++D +T++M FF++M+ I + +  T K+
Sbjct: 310 CEEGAPLWMATFSDMVTLVMVFFILMYAIASKNVQTFKS 348


>gi|237803483|ref|ZP_04591068.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025465|gb|EGI05521.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 271

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 101/248 (40%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLTSYLGSGADVSHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLVKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N +LS DRA +   VL+  GV E RI ++ G+       A+      + NRR++
Sbjct: 200 -GDRQENLKLSKDRAQAVADVLIDLGVDEKRI-QVEGYGQQFPVDANTSERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|253701833|ref|YP_003023022.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251776683|gb|ACT19264.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 228

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +  +FD    +  P+    L +    L  S   I+I GHTD++        N  LS  R
Sbjct: 110 PSGILFDVGKDVLKPDAKDSLSRAAATLKDSQTTITIEGHTDST---GSNAINQPLSERR 166

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A      L+  GV   +++ I G+   R  + +D     + NRR+ I +   +
Sbjct: 167 ANRVRDYLVSQGVPGAKMAAI-GYGSSRPAVPNDSDANRALNRRVQIELTPNE 218


>gi|114764072|ref|ZP_01443311.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114543430|gb|EAU46445.1| OmpA domain protein [Roseovarius sp. HTCC2601]
          Length = 221

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V    T   +++++       +F   S     +    ++ +G  L    
Sbjct: 87  EAELRQQLGNDVGIRNTGDRLIVTMPQD---ILFGFDSDTLRNDLQADIRTVGSSLLQYP 143

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                + GHTD+      A  N  LS  RA S   VL+ SGV   RI  + G        
Sbjct: 144 NTSVQVVGHTDSD---GDAGYNQGLSQRRAQSVANVLVSSGVPSSRI-SVIGRGEAAPVA 199

Query: 323 ASDPMN--SANRRIDILVE 339
           ++      + NRR++I++ 
Sbjct: 200 SNLTPEGKAQNRRVEIVIL 218


>gi|323525137|ref|YP_004227290.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323382139|gb|ADX54230.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 217

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + L  + E +  + GHTD++        N  LS++
Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + GV+  R+S   G   ++    +      +ANRR++I +  
Sbjct: 160 RAQSVVGFLEQRGVAPQRLSA-QGMGQNQPIADNSTEAGRAANRRVEIYLRA 210


>gi|163740474|ref|ZP_02147868.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161386332|gb|EDQ10707.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
          Length = 216

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 10/205 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
              +     ++     K ++      L  +                  A+        + 
Sbjct: 14  GLTACTDPATIGTPGSKTQNGALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIG 73

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++ +    L       G+    T   +++S+ +      F   S+   P     L K+ 
Sbjct: 74  NQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLT---FATDSAAVSPAVRSDLNKVA 130

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L       + + GHTD+      A  N  LS  RA +    +   GV  +R+ +I G 
Sbjct: 131 SSLVRYPNSQVQVIGHTDSD---GDAGYNQGLSERRANAVADQIQAGGVPYNRV-QIIGR 186

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +   ++      + NRR++I+V
Sbjct: 187 GESQPVASNLTAEGKARNRRVEIVV 211


>gi|330504866|ref|YP_004381735.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328919152|gb|AEB59983.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 222

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L       GV  +     I + +        F   S+         L  +    
Sbjct: 81  DKQEEELRRSMQGTGVEVQRQGDVIQLIM---PGNITFATDSAQIASSFYQPLNNLANSF 137

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I + GHTD++        N  LS  RA S    L+  G+   R+S   G    
Sbjct: 138 RQYNQNSIEVVGHTDST---GSHSHNMALSQRRAQSVADYLLAQGIDPSRVST-RGMGPD 193

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 194 QPVASNATADGRAQNRRVEVTLRPLPG 220


>gi|169123287|gb|ACA47115.1| OmpF [Pseudomonas putida]
          Length = 343

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 273

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL    GV   R+  + G+   R    +       
Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNKTEAGRA 329

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 330 VNRRVEAQVEA 340


>gi|229013711|ref|ZP_04170840.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
 gi|228747633|gb|EEL97507.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
          Length = 234

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S N  E       ++++    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNEEKELSANSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMLTILEN---VLFDSGKADVKLESLGIAKEMSNLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S + G+  +R   
Sbjct: 150 EITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTPEGKAKNRRVEVFIL 227



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++    K   + +     +  + + L+  I    N +Q
Sbjct: 58  NSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|229090688|ref|ZP_04221921.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
 gi|228692630|gb|EEL46356.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
          Length = 126

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           +      TG+ + I+D     +FD   +   PE   ++ ++          I + GHTD+
Sbjct: 1   MNVYREDTGVSVVIVDNL---IFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDS 57

Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSA 330
            P  N     NW LS  RA +    L++   V + R++ + G+A  +  + +D       
Sbjct: 58  RPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEK 116

Query: 331 NRRIDILVED 340
           NRR+ I +++
Sbjct: 117 NRRVVIYIKE 126


>gi|193212466|ref|YP_001998419.1| OmpA/MotB domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085943|gb|ACF11219.1| OmpA/MotB domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 232

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +SS   P +   ++ +  VL    +  + + GHTD+         N  LS  RA S
Sbjct: 114 LFSTNSSTLNPNSRYNIENLARVLNRYPDTNVVVEGHTDSI---GSEATNQVLSERRAES 170

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              +L   GV  +R++ + G+   R    ++       NRR+++L+    
Sbjct: 171 VVSLLRAYGVYGNRLTAV-GYGETRPVATNETEMGRRQNRRVEVLIYANN 219


>gi|4580968|gb|AAD24555.1|AF117963_1 OprF [Pseudomonas cichorii]
          Length = 346

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   ++  P +   ++ + + +    +  + + GHT
Sbjct: 217 NVTVDADGCPAVAEVVRVELDVKFDFDKAVVKPNSYGDIKNLADFMQQYPQTTTTVEGHT 276

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL+   GV  +R++ + G+   R    +       
Sbjct: 277 DSV---GPDAYNQKLSERRASAVKQVLVNQYGVGANRVNSV-GYGETRPVADNATEAGRA 332

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 333 VNRRVEAEVEA 343


>gi|19705338|ref|NP_602833.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19705349|ref|NP_602844.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19713317|gb|AAL94132.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19713330|gb|AAL94143.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 151

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V    +     ++I+    +  FD   S   P+   +L  I E +  +   I+I GHT
Sbjct: 14  KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L++ G+SEDRI  I      +    +      + 
Sbjct: 74  DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130

Query: 331 NRRIDILVEDRQ 342
           NRR++  +  R+
Sbjct: 131 NRRVEFKLVQRE 142


>gi|242278087|ref|YP_002990216.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242120981|gb|ACS78677.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 356

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F         E +  L +   +L       + + GHTD+         N  LS  RA S 
Sbjct: 254 FGFDKYQITDEMVPALTEAATMLEEFPNLKVLVGGHTDS---SGSEAYNQGLSERRAKSV 310

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L  +G++  R+ ++ G+     K  +        NRR++I VED
Sbjct: 311 ADWLAANGIAPKRL-EVKGYGEMNPKYDNKTKEGRKLNRRVEIDVED 356


>gi|198245916|ref|YP_002214234.1| hypothetical protein SeD_A0303 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197940432|gb|ACH77765.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|326621978|gb|EGE28323.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 434

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|76817452|ref|YP_336363.1| hypothetical protein BURPS1710b_A1205 [Burkholderia pseudomallei
           1710b]
 gi|134278396|ref|ZP_01765110.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|167924203|ref|ZP_02511294.1| hypothetical protein BpseBC_36953 [Burkholderia pseudomallei
           BCC215]
 gi|217422136|ref|ZP_03453639.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|254185740|ref|ZP_04892258.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254263509|ref|ZP_04954374.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|76581925|gb|ABA51399.1| ompA family protein [Burkholderia pseudomallei 1710b]
 gi|134250180|gb|EBA50260.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|157933426|gb|EDO89096.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|217394367|gb|EEC34386.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|254214511|gb|EET03896.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 438

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 343 RVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427


>gi|256819127|ref|YP_003140406.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256580710|gb|ACU91845.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 230

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 7/142 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  +      FD +      ++   L K+  +L    
Sbjct: 80  QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNKSRQTLDKLSAILKEYP 139

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  + + GHTD          N  LS  RA +        G+   R +    +       
Sbjct: 140 DTNVIVAGHTDNV---GKDEYNLGLSQRRAQAVTNYFKSKGLVGSRFTT-KWYGERNPVA 195

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
           +++     + NRR+++++   +
Sbjct: 196 SNETADGRAKNRRVNVVIVPNE 217


>gi|224372468|ref|YP_002606840.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
 gi|223589113|gb|ACM92849.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
          Length = 373

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+   P+ +  +++  E L  +      I+G+TD+   +  A  N +LS  RA + 
Sbjct: 271 FDNDSADIKPQFMKKIEEFAEFLKQNPAYKAEIQGYTDS---KGSAEYNQKLSERRAKAV 327

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
           Y+VL+K G+S+DR+    G+       ++D  +  + NRR+
Sbjct: 328 YEVLIKQGISKDRL-SYKGYGEANPVASNDTPDGKAQNRRV 367


>gi|149928286|ref|ZP_01916529.1| OmpA/MotB [Limnobacter sp. MED105]
 gi|149823015|gb|EDM82257.1| OmpA/MotB [Limnobacter sp. MED105]
          Length = 218

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 7/149 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q+    +                         +I+ +       FD   +        
Sbjct: 64  AIQECDPDLIPKKPAPAPVAAPAPAPEPAPAPTPVITKVSLEADAYFDFDKATLKQGGKD 123

Query: 251 VLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +      L        I  GHTD+         N +LS  RA +    ++  GVS DRI
Sbjct: 124 RIDSEIAKLGQVDLNSVIAIGHTDSI---GSDAYNQKLSERRAQAVKDYMVSKGVSADRI 180

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDI 336
            +I G    +    +      + NRR++I
Sbjct: 181 -QIKGMGESQPVADNKTREGRAKNRRVEI 208


>gi|260576491|ref|ZP_05844481.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259021374|gb|EEW24680.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 464

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 92/300 (30%), Gaps = 19/300 (6%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
           +  +  +         L    +   D       +       +      +  +     +  
Sbjct: 166 EKLQGADAELTAMTLALEAQRQKAEDTLTLLAAAETKAAQDAEILSGKEALLATARAALA 225

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS---EKGKDLCKSTDLEKSINKEENYFLP 176
            + +          L N Q +                      +    +++  + N  L 
Sbjct: 226 TETERSAESARQVALLNQQIAALRSQLGELQGMLDAAAAKDVAAKVQLEALGSQLNSALA 285

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNT 234
            ++ E+      +    +  +  +  L+   ++   +       R G+ I        + 
Sbjct: 286 QVASEQRRRADLEAAEAERLRAEAQDLAKFRSEFFGELSKVLAGRQGVRIVGDRFVFSSE 345

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRN--IARDN 284
            +F+  S+   PE    +  +   L             +I + GHTD  P        DN
Sbjct: 346 VLFNPGSADLAPEGRAQIAGVVATLNEIAAQIPPGIDWIIRVDGHTDNVPLSGQGEFADN 405

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
           W LS  RA +  + +  + G S +R+   +GF  ++     D     + NRRI++ + +R
Sbjct: 406 WELSQARALAVVRYMQDNLGFSPERL-AATGFGEYQPVAVGDAPETRALNRRIELKLTER 464


>gi|154250728|ref|YP_001411552.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154154678|gb|ABS61895.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 224

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++        F  +SS    +   VL  +  
Sbjct: 82  YMDKQEAELTQRLRASGVSVTRVGNDIILNM---PGNVTFATNSSDINAKFYDVLNSVAI 138

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  I + GHTD++      + N  LS  RA S    L+   V   R   I G  
Sbjct: 139 VLKEYDKTLIDVTGHTDST---GSDQYNLELSQKRAQSVASYLIGQSVDSRRFY-IVGAG 194

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +    +D       NRR++I +
Sbjct: 195 ESQPIATNDTPQGREQNRRVEIRL 218


>gi|120555732|ref|YP_960083.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120325581|gb|ABM19896.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 236

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I + +        FD   S         L+ +  
Sbjct: 96  YMDRQEAQLRQKLEGTGVRVVRNGDQIDLIM---PGNITFDTDQSTIRSGFTGTLESVAL 152

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      +I I GHTD++        N  LS  RA S    L+  G+   R ++ +G+ 
Sbjct: 153 VLKEFDKTIIQIEGHTDST---GSDSYNQLLSERRASSVRDFLLNQGIEPRR-TRATGYG 208

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                 ++D       NRR+++ +
Sbjct: 209 ERYPIASNDTAAGREQNRRVELTL 232


>gi|261417146|ref|YP_003250829.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373602|gb|ACX76347.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326585|gb|ADL25786.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 232

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT---PMFDKSSSIPLPETI 249
           +D    +  +L+G         V    +  GI +   D R+      F   S+  +P ++
Sbjct: 77  EDSYTILCESLTGPFECGETPYVSRTASTGGISVVFDDTRSELTGVTFKAGSAELVPSSL 136

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L      L  + +  I + GHT +      A  N +LS DRA S    +++ G+  DR
Sbjct: 137 KTLNAAIAGLKRNPKAKIEVEGHTSSD---GSAELNQQLSEDRANSVRNYMIEQGIDADR 193

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           ++ + G+   R K  +        NRRI++ V +
Sbjct: 194 VTAV-GYGPSRPKGDNSTEAGRRANRRIELKVLN 226


>gi|293608672|ref|ZP_06690975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829245|gb|EFF87607.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 473

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 17/271 (6%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P    L T  KG   +             L        +S       T+Q       + +
Sbjct: 215 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSSTQDCNVDTSQTYAAGFTDKD 274

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                          SL    +K            ++  +    +P            ++
Sbjct: 275 ALAGVLGALKGVPNASLEWIGDKITLKAGDAAALAALTAKVKALVPHTEVVSTAPETAEQ 334

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + +      + L  +  +N+    L +     I+           F   SS    +   
Sbjct: 335 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 384

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L +   +L   + V  ++ GHTD++     A  N  LS  RA +    L+  GV   ++
Sbjct: 385 ILDQAATLLNKVSGVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLISKGVDGTKL 441

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               G    +    +        NRRI+  V
Sbjct: 442 VA-QGHGSDQPVAENTTEEGRFKNRRIEFSV 471


>gi|322418405|ref|YP_004197628.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320124792|gb|ADW12352.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 228

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 9/141 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                   +           + +++    +  +FD       PE    L K    L  S 
Sbjct: 85  QAAALKKSMPQAEVIRDGDKVYVAL---PSGILFDVGKDTLKPEAKDALSKAVPTLRDSQ 141

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I I GHTD++        N  LS  RA      L+  GV   +++ + G+   R  +A
Sbjct: 142 TTIVIEGHTDST---GSNAVNQPLSERRAGRVRDFLISQGVPGSKMAAV-GYGSTRPAVA 197

Query: 324 SDPM--NSANRRIDILVEDRQ 342
           +D     + NRR+ I +   +
Sbjct: 198 NDTEANRALNRRVQIELSPNE 218


>gi|33597667|ref|NP_885310.1| outer membrane protein A precursor [Bordetella parapertussis 12822]
 gi|33602447|ref|NP_890007.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
 gi|33574095|emb|CAE38420.1| outer membrane protein A precursor [Bordetella parapertussis]
 gi|33576886|emb|CAE33966.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
          Length = 193

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+         N +LS  RA +
Sbjct: 86  FFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +   ++      + NRR++I +   +
Sbjct: 143 VKTYLVSKGIDPNRIYT-EGKGELQPIASNKTREGRAQNRRVEIEIVGSR 191


>gi|33592100|ref|NP_879744.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
 gi|33571744|emb|CAE41245.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
 gi|332381516|gb|AEE66363.1| outer membrane protein A precursor [Bordetella pertussis CS]
          Length = 193

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+         N +LS  RA +
Sbjct: 86  FFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G    +   ++      + NRR++I +   +
Sbjct: 143 VKTYLVSKGIDPNRIYT-EGKGELQPIASNKTREGRAQNRRVEIEIVGSR 191


>gi|88705660|ref|ZP_01103370.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
 gi|88700173|gb|EAQ97282.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
          Length = 247

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 7/133 (5%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268
           N  +GV  + T   I   ++   +   FD  S+    ++   L     V+   +   + +
Sbjct: 119 NTPEGVKVDATGCPIKDEVVLTVDRLSFDFDSAALDAQSRAALDAAVAVIKSHSSVKMDV 178

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326
            G+TD          N  LS  RA +A   L+  GV  D++ + +G        ++D   
Sbjct: 179 VGYTDT---SGPEEYNLGLSKRRAQAAVDYLVSQGVDADQL-RATGRGEADPVASNDTRD 234

Query: 327 MNSANRRIDILVE 339
               NRR++++V 
Sbjct: 235 GRERNRRVELVVR 247


>gi|83859947|ref|ZP_00953467.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852306|gb|EAP90160.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
          Length = 338

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 101/322 (31%), Gaps = 21/322 (6%)

Query: 37  YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95
           + D   T+L+   ++++++           +       +      +     +      S+
Sbjct: 21  FVDALATLLL---VIVFLLAVFTAGQFALSQALTGRDEQLAELNGRLATLAEELNLAQSE 77

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK-- 153
           N+        +T+ +  L   +     Q   L+  +    +S   E   N   + +    
Sbjct: 78  NERLSLRVSTLTQENGALAETNAGLTSQIAGLQEGLAAARSSLAEEEALNEEAQATVALL 137

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
              +    +    +N+  N      ++ +   +   +RL        + L+   ++   +
Sbjct: 138 NNQMAALREELARLNEALNASEAREAELEAEVVNLGRRLNAALASEVARLARYRSEFFGR 197

Query: 214 GVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263
            +     R+G+ +           +F   S+    E    L  I + +            
Sbjct: 198 LIEVLGDRSGVRVVGDRFVFETDVLFASGSAELSEEGRRSLAPIADAIIQLTDEIPDDLD 257

Query: 264 EVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            V+ + GHTD  P         NW LS  R+ S        GV   R+    GF  H   
Sbjct: 258 WVLRVDGHTDRVPLGPNAPFESNWELSTARSLSVIAYFESRGVPPRRLLAA-GFGEHYPI 316

Query: 322 IASDPMN--SANRRIDILVEDR 341
                    + NRRI++ +  R
Sbjct: 317 AEGRTQEAYARNRRIELKLTSR 338


>gi|84501356|ref|ZP_00999561.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
 gi|84390647|gb|EAQ03135.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
          Length = 350

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I+ +     F   SS     +  +L  I ++++      I++ GHTD+      A  
Sbjct: 236 RFEILSRTGNIYFRPGSSRLDDASAPLLDSIYDIISRCPGLRIAVAGHTDSI---GSAAS 292

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           N  LS  RA S    L   G+ + R+  + G+   R    +  D   S NRRI+  V
Sbjct: 293 NQSLSERRASSVVDYLAAKGLGQGRMIAV-GYGEARPVADNGTDAGRSRNRRIEFSV 348


>gi|15598888|ref|NP_252382.1| Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
 gi|107103206|ref|ZP_01367124.1| hypothetical protein PaerPA_01004275 [Pseudomonas aeruginosa PACS2]
 gi|116051689|ref|YP_789472.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218890031|ref|YP_002438895.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254236602|ref|ZP_04929925.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
 gi|254242387|ref|ZP_04935709.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
 gi|296387801|ref|ZP_06877276.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           PAb1]
 gi|313109098|ref|ZP_07795070.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
 gi|9949856|gb|AAG07080.1|AE004788_10 Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
 gi|115586910|gb|ABJ12925.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168533|gb|EAZ54044.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
 gi|126195765|gb|EAZ59828.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
 gi|218770254|emb|CAW26019.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|310881572|gb|EFQ40166.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
          Length = 261

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 89/239 (37%), Gaps = 13/239 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            T  + +L+   +N      + +        ++ +        +  + G+D      L  
Sbjct: 21  STPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        +      A  +    Q    ++ +  + L  D +   +  + T  G +
Sbjct: 81  LTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD   S   P  +  +Q++ E L  + E    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RLS  RA S    L+  G+S +R+    G+       ++      + NRR+++ + + 
Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249


>gi|326799819|ref|YP_004317638.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326550583|gb|ADZ78968.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 434

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                ++     +N +    ++ +             KEEN  L       +        
Sbjct: 223 ALGDATKPFLGNRNPVVDMRKEYQASYDELAAALKAQKEENEALKAQLTTDLADDDGDGV 282

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR------NTPMFDKSSSIPL 245
                K   +     V  +       +     I ++  D+R          FD S +   
Sbjct: 283 ANKFDKCPGTAADAKVDGSGCPLPEAKKVVQQITVTEEDRRVVDEAIKNLEFDLSKATIR 342

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P +   L K+  +L      + + GHTD +      + N RLS +RA +    L+  G +
Sbjct: 343 PTSYPSLDKVARLLVEKNFSLKLAGHTDNT---GSMKLNMRLSKERAEAVKAYLVSKGAN 399

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             RI   +G+   +    +        NRR++  +
Sbjct: 400 PSRIEA-TGYGPTQPIATNATAEGRQANRRVEFTL 433


>gi|260494612|ref|ZP_05814742.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
 gi|260197774|gb|EEW95291.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
          Length = 396

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 10/274 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   +     +    DE    +R+                 VD +       ++ +    
Sbjct: 125 NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNRVSFQ 184

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +   + E    ++T + +          +E + +    Y     +       K K
Sbjct: 185 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 244

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
            ++    K        L        +        I  +  +I   +  +FD       PE
Sbjct: 245 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 304

Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              VL+ +  VL  +  +   I GHTD+       + N  LS +RA +    L   G++ 
Sbjct: 305 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 361

Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           +    I G+   R   ++D       NRR++I++
Sbjct: 362 E--ITIKGYGKTRPIASNDTPEGKQKNRRVEIVI 393


>gi|186476941|ref|YP_001858411.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184193400|gb|ACC71365.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 217

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + L  + EV+  + GHTD++        N  LS++
Sbjct: 104 PSSVTFDTNSYAIKPSFAPVLSQVAQTLNQNPEVVAQVVGHTDST---GQPAYNQTLSVN 160

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S  Q L   GV+  R+S  +G   ++    ++     + NRR++I +  
Sbjct: 161 RAQSVAQQLATDGVAPQRLSA-TGMGANQPIADNNTETGRAQNRRVEIYLRA 211


>gi|23010955|ref|ZP_00051470.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 464

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 28/288 (9%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           NP   + + A+             +  +   +  +   +++ D+   S N   +   ++ 
Sbjct: 185 NPGALDTVAAAPSEARLDARARTGAPGRAKEATKDASKESARDVARQSLNDAMRQAGMKL 244

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--- 186
                   +++   K   +  S +        D + +  K       P SKE   A+   
Sbjct: 245 ASAEPMPIKEAPPAKQPDSTKSAEAPPEGPVADAKAADIKPAPKAEAPPSKEPAAAIPAE 304

Query: 187 ----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                    L  L  +I+  +  L        V    T  G+LISI D+ N  MF   S+
Sbjct: 305 GAKSAETAALAALKDEIAKAVPSLPMGAPAPRVEVRRTGEGVLISITDEINFSMFGIGSA 364

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL--DR--------A 292
            P P+ +  L++I ++L      + +RGHTDA PFR+   DNWRLS    R        A
Sbjct: 365 EPTPKVVKALERIAKILNTRPGRVVVRGHTDARPFRSETYDNWRLSRPGRRWPPTCWCAA 424

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            S  +     G S  ++ +       + +IA+DP  + NRRI+IL+  
Sbjct: 425 ASTRR-----GSSASKLCR------PQPRIAADPKAAENRRIEILLRG 461



 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 2/205 (0%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           +   + IIIK+     +  ++ G+WKI  ADFMT +MA FLVMW+IN+T  + K+ I +Y
Sbjct: 3   EHAHEIIIIKRH-GDHEDGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEY 61

Query: 69  FNPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           FNP     +T   KG+ D QN P   + +            +      G+   + +   L
Sbjct: 62  FNPVKLAEVTHDRKGVNDPQNTPNDPAPSGKGKGDGGSAEGSGKADAAGAPGSRARESAL 121

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
             + + +     +E         S     L              + F P   +   L  +
Sbjct: 122 FQDPYAVLAKLAAEADAAGPEAASADANPLEVGQPGVAGGETGRDPFDPLYWQVAALPRQ 181

Query: 188 RKKRLQDLAKKISSTLSGLVADNIV 212
           R      L    ++     +     
Sbjct: 182 RTDNPGALDTVAAAPSEARLDARAR 206


>gi|294678506|ref|YP_003579121.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294477326|gb|ADE86714.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 422

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  +   K   +  +  T  +   +  +        +       +      E      ++
Sbjct: 168 AEKQAALKAVAEKTLTETRAESDRKAEQVARLNQQVAALRGQLADLQAVLDEAKARDTEA 227

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               +++  + N  L  ++ E+      ++  +  A+  +  L+   ++   +       
Sbjct: 228 KVQVEALGSQLNSALAQVAAEQKRRAALEEEARRKAEAEAKDLARYRSEFFGRMSQLLDG 287

Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--------STEVISIRG 270
           R G+ +        +  +F   S+   PE    + ++ E               ++ + G
Sbjct: 288 RAGVRVVGDRFVFSSEVLFQPGSADLSPEGQAQISRVAETFRELAAEIPPEIDWLLEVDG 347

Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326
            TD +P       +DNW LS  RA S  + L++  G +  R+   +GF   R   A    
Sbjct: 348 FTDDTPLSGQGEFKDNWELSQARALSVVKYLIEAQGFAPKRL-AAAGFGEFRPVAAGKSP 406

Query: 327 -MNSANRRIDILVEDR 341
              + NRRI++ + +R
Sbjct: 407 EARAQNRRIELKLTER 422


>gi|291617923|ref|YP_003520665.1| YtxE [Pantoea ananatis LMG 20103]
 gi|291152953|gb|ADD77537.1| YtxE [Pantoea ananatis LMG 20103]
 gi|327394329|dbj|BAK11751.1| flagellar motor protein YtxE [Pantoea ananatis AJ13355]
          Length = 413

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + S L   + + +   V         ++++   +   +F   S+        V+Q++ E
Sbjct: 259 NLKSFLKPEIDEGL---VAVRDEADQSVVTL---KGDGLFASGSTEVRGRYDAVIQRVAE 312

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            + + +  I + G++D  P R+     N+ LSL RA S   +L K      R+    G  
Sbjct: 313 AMNNVSGKILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQKQLAKPSRVKA-EGRG 371

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                + +      + NRR++I ++
Sbjct: 372 ETHPLVPNTSAENRARNRRVEITLQ 396


>gi|296329693|ref|ZP_06872178.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305674090|ref|YP_003865762.1| motility protein B; MotB component of the stator flagellum complex
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153191|gb|EFG94055.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305412334|gb|ADM37453.1| motility protein B; MotB component of the stator flagellum complex
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 261

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T  +        +    +S   +E        ++     ++    ++L    S     + 
Sbjct: 59  TGGTGVMDYSSVTPPENESDGIDEVEKDKEEKEKNKKEKEKAADQKELENVKSQVEKFIK 118

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266
              +   +  + T  G+LI+I D      FD   +    E + + ++I  +L  +    I
Sbjct: 119 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 175

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            I GHTD  P +N     NW LS+ RA +   +L+++   + ++    G+  ++   ++ 
Sbjct: 176 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 235

Query: 326 PMNSA--NRRIDILVEDR 341
                  NRR+++L+  R
Sbjct: 236 TAEGRSKNRRVEVLILPR 253



 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          + +KK    +  +   SW + YAD +T+L+A F+V++  ++ D    + + + FN     
Sbjct: 1  MARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF-- 58

Query: 76 LMTASKGIFDEQNPPERSSQNKI 98
            T   G+ D  +     +++  
Sbjct: 59 --TGGTGVMDYSSVTPPENESDG 79


>gi|293604168|ref|ZP_06686576.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
 gi|292817393|gb|EFF76466.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
          Length = 193

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 87  FFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSI---GTEAYNQKLSERRAAS 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G        ++      + NRR++I +   +
Sbjct: 144 VKTYLVSKGIDPNRIYT-EGKGELNPIASNKTKEGRAQNRRVEIEIVGSR 192


>gi|21674175|ref|NP_662240.1| OmpA family protein [Chlorobium tepidum TLS]
 gi|21647337|gb|AAM72582.1| OmpA family protein [Chlorobium tepidum TLS]
          Length = 231

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 19/150 (12%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +   A +I   + G   + + +G+                    +F   S+     +   
Sbjct: 81  MDKQADEIRQEVQGAKVERVGEGIRVVF------------DTGLLFSTDSATLNANSRYN 128

Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           ++K+  +L    +   +  GHTD +        N  LS  RA S   +L   GVS  R++
Sbjct: 129 IEKLARILNRYNDTNVVIEGHTDNT---GTEASNQILSERRAESVATLLRTYGVSGRRLT 185

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338
            I G+   R    ++       NRR+++L+
Sbjct: 186 AI-GYGETRPVATNETEAGRRLNRRVEVLI 214


>gi|19703598|ref|NP_603160.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19713702|gb|AAL94459.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 157

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K V    +     ++I+    +  FD   S   P+   +L  I E +  +   I+I GHT
Sbjct: 14  KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L++ G+SEDRI  I      +    +      + 
Sbjct: 74  DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130

Query: 331 NRRIDILVEDRQ 342
           NRR++  +  R+
Sbjct: 131 NRRVEFKLVQRE 142


>gi|167583745|ref|ZP_02376133.1| hypothetical protein BuboB_00307 [Burkholderia ubonensis Bu]
          Length = 405

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 7/142 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   ++  +   + VL ++ + L 
Sbjct: 254 RIAKFLEPEIAAGLVSVRDDADRSVIVL---RGDGLFQSGATSVIDRYLPVLARVADALN 310

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA S   +L       +R+    G     
Sbjct: 311 KVPGNVRVSGYTDDTPVHTARFASNWDLSRERAESVRSLLAARLDRPERL-AAQGRGTLD 369

Query: 320 LKIASDP--MNSANRRIDILVE 339
               +D     + NRR++I + 
Sbjct: 370 PVAPNDTPANRARNRRVEITLL 391


>gi|307728928|ref|YP_003906152.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307583463|gb|ADN56861.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 217

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + L  + E +  + GHTD++        N  LS++
Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + GV+  R+S   G   ++    ++     +ANRR++I +  
Sbjct: 160 RAQSVVSFLEQRGVAAQRLSA-QGMGQNQPIADNNTEAGRAANRRVEIYLRA 210


>gi|255067633|ref|ZP_05319488.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
 gi|255048107|gb|EET43571.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
          Length = 546

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 11/145 (7%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I    + +  D      +       ++I++    +  +F+             L    +
Sbjct: 403 YIPKLKALMPKDPPPPKPIKPEPVKPVVITL---DSLALFETGQFELKNNANKALIGALK 459

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315
            +    +    + GHTD          N +LS  RA S    L + S V E R  ++ G 
Sbjct: 460 AIESHPDTRILVEGHTDNV---GNPVSNQQLSEKRAQSVKDWLVISSNVPESRF-EVKGL 515

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +    +      + NRR++I++
Sbjct: 516 GDTKPIADNQTEEGKAKNRRVEIIL 540


>gi|258405399|ref|YP_003198141.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
           5692]
 gi|257797626|gb|ACV68563.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 227

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L      +          IL +  D  +  +FD  S+   P  +  L +  
Sbjct: 77  AYMDRQEQELRNALAQERAASVRREQDILRATFD--SNVLFDFDSARVKPGGVSELNRAA 134

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V     +  I + GHTDA         N  LS  RA +   VL++ GV   R+S + G+
Sbjct: 135 SVFNRYPQTRIRVEGHTDA---SGSEEYNMDLSRRRAQAVKDVLVQQGVDPRRVSTV-GY 190

Query: 316 AHHRLKIASDPMNSANRRIDILVE 339
              +   +SDP  +ANRR+++++E
Sbjct: 191 GETQPV-SSDP--AANRRVEVVIE 211


>gi|16759268|ref|NP_454885.1| hypothetical protein STY0305 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142957|ref|NP_806299.1| hypothetical protein t2581 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052080|ref|ZP_03344958.1| hypothetical protein Salmoneentericaenterica_03522 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213428430|ref|ZP_03361180.1| hypothetical protein SentesTyphi_24568 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|289805848|ref|ZP_06536477.1| hypothetical protein Salmonellaentericaenterica_15952 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
 gi|25513281|pir||AI0536 probable membrane protein STY0305 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501559|emb|CAD08737.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138589|gb|AAO70159.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|329805048|gb|AEC05360.1| putative membrane protein [Salmonella enterica]
          Length = 433

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 300 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 356

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 357 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 415

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 416 GSKAGRAKNRRVEILVVE 433


>gi|224417733|ref|ZP_03655739.1| CADF precursor [Helicobacter canadensis MIT 98-5491]
 gi|253827077|ref|ZP_04869962.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
 gi|313141275|ref|ZP_07803468.1| cadf [Helicobacter canadensis MIT 98-5491]
 gi|253510483|gb|EES89142.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
 gi|313130306|gb|EFR47923.1| cadf [Helicobacter canadensis MIT 98-5491]
          Length = 306

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S++  P     +Q   + +  + +  ++  GHTD++     A  N +LS  RA S 
Sbjct: 202 FPTDSAVVDPVYYPEIQDFAKYMDQNPDKTAVINGHTDST---GSAAYNQKLSEKRAQSV 258

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
              ++K G+S +R+    G+   +   ++        NRR++
Sbjct: 259 KNEIVKQGISSERLEA-KGYGEEKPIASNKTREGRQKNRRVE 299


>gi|163737113|ref|ZP_02144531.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|161389717|gb|EDQ14068.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 219

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 10/205 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
              +     ++     K ++      L  +                  A+        + 
Sbjct: 17  GLTACTDPATIGTPGSKTQNGALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIG 76

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++ +    L       G+    T   +++S+ +      F   S+   P     L K+ 
Sbjct: 77  NQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLT---FATDSAAVSPAVRSDLNKVA 133

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L       + + GHTD+      A  N  LS  RA +    +   GV  +R+ +I G 
Sbjct: 134 SSLVRYPNSQVQVIGHTDSD---GDAGYNQGLSERRANAVADQIQAGGVPYNRV-QIIGR 189

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +   ++      + NRR++I+V
Sbjct: 190 GESQPVASNLTAEGKARNRRVEIVV 214


>gi|300312990|ref|YP_003777082.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
 gi|124483422|emb|CAM32584.1| signal peptide protein [Herbaspirillum seropedicae]
 gi|300075775|gb|ADJ65174.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
          Length = 203

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   +   P     L ++   L      + I  GHTD+         N +LS+ RA
Sbjct: 95  DAFFDFDKATLKPAGKAKLDELVGNLKAINLEVIIAVGHTDSI---GSVAYNQKLSVRRA 151

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            S    L+  GV  +R+    G    +    +      + NRR++I V   +
Sbjct: 152 ESVKAYLVSKGVEANRVYT-EGKGKSQPVADNKTAAGRAKNRRVEIEVVGTR 202


>gi|77919760|ref|YP_357575.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
 gi|77545843|gb|ABA89405.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
          Length = 224

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 196 AKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           A  +      +       +G   +     + ++        +FD +S          LQ+
Sbjct: 73  ANYMEKQEQAMRQQLAGVEGASIQRDAEVLAVTFKSD---VLFDVNSYSVKSGGYDELQR 129

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  VL +  +  I I GHTD++      + N +LS  RA +   VL+  GV+  R+  + 
Sbjct: 130 VAGVLNNYPQTSIQIAGHTDST---GSEQYNMQLSRQRAEAVKNVLVGYGVAPARLMTV- 185

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           G+   +   ++        NRR+ I +   Q
Sbjct: 186 GYGESKPIASNANEAGRQINRRVAITITPNQ 216


>gi|167899688|ref|ZP_02487089.1| hypothetical protein Bpse7_38555 [Burkholderia pseudomallei 7894]
          Length = 407

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 311

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       +RI+   G     
Sbjct: 312 RVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 370

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 371 PVAPNDSPANRARNRRVEITLMLAPG 396


>gi|110638581|ref|YP_678790.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281262|gb|ABG59448.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 694

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + N   FD   S    E+   L +  E++     +   I GHTD         +N  LS 
Sbjct: 585 RLNNLFFDTGKSDLRKESYAELNRTVELMKLYLTMTIEISGHTDNV---GGDAENQTLSE 641

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +RA +    L+  G+   R+    G+   +    +D  +    NRR+D  +
Sbjct: 642 NRAKAVVNYLVSHGIDASRVQS-KGYGKTKPVSTNDTDHGRQLNRRVDFTI 691


>gi|168232215|ref|ZP_02657273.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168240017|ref|ZP_02664949.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194448829|ref|YP_002044265.1| hypothetical protein SeHA_C0320 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194468900|ref|ZP_03074884.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194407133|gb|ACF67352.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455264|gb|EDX44103.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205333484|gb|EDZ20248.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205339891|gb|EDZ26655.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 434

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|16763665|ref|NP_459280.1| hypothetical protein STM0282 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56414595|ref|YP_151670.1| hypothetical protein SPA2482 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168238628|ref|ZP_02663686.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168261319|ref|ZP_02683292.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|168465340|ref|ZP_02699222.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168819144|ref|ZP_02831144.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194736479|ref|YP_002113300.1| hypothetical protein SeSA_A0314 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197262114|ref|ZP_03162188.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197363525|ref|YP_002143162.1| hypothetical protein SSPA2317 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|238913699|ref|ZP_04657536.1| hypothetical protein SentesTe_21562 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|15130931|emb|CAC48213.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16418782|gb|AAL19239.1| putative outer membrane protein, OmpA family [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|56128852|gb|AAV78358.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194711981|gb|ACF91202.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631766|gb|EDX50286.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197095002|emb|CAR60547.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197240369|gb|EDY22989.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197288542|gb|EDY27919.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205344023|gb|EDZ30787.1| SciP protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205350071|gb|EDZ36702.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|261245507|emb|CBG23297.1| putative type VI system protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267991971|gb|ACY86856.1| hypothetical protein STM14_0330 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156902|emb|CBW16378.1| putative membrane protein (SPI-6 associated) [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312911246|dbj|BAJ35220.1| hypothetical protein STMDT12_C02770 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320084532|emb|CBY94324.1| Uncharacterized 24.6 kDa protein in ccpA 3'region ORF2 [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321224938|gb|EFX49999.1| Outer membrane protein ImpK/VasF, OmpA/MotB [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323128597|gb|ADX16027.1| Putative outer membrane protein, OmpA family [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332987228|gb|AEF06211.1| hypothetical protein STMUK_0285 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 434

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|84503479|ref|ZP_01001534.1| OmpA family protein [Oceanicola batsensis HTCC2597]
 gi|84388157|gb|EAQ01110.1| OmpA family protein [Oceanicola batsensis HTCC2597]
          Length = 226

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V    T   +++++       +F   S+   P+    L  +   L    
Sbjct: 92  EAALRSELGSNVQIVNTGDRLVVTMPQD---ILFATDSASLRPDLTTDLVTVARSLNEYP 148

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              + + GHTD +     A  N +LS  RA +   VL+ SGVS  RI    G    + + 
Sbjct: 149 RTTVQVVGHTDNT---GDAAYNQQLSARRASAVANVLINSGVSAGRIQSF-GRGEDQPRA 204

Query: 323 ASDPMNSA--NRRIDILVE 339
            +        NRR+DI++ 
Sbjct: 205 TNLTPEGRQLNRRVDIVIL 223


>gi|254302656|ref|ZP_04970014.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322848|gb|EDK88098.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 157

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K +    +     ++I+       FD   S   PE   +L+ I E +  +   I+I GHT
Sbjct: 14  KNIDILNSEAPKEMTIVLDERALNFDFDKSNVKPEYYDLLKNIKEFVEQNNYEITIVGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L++ G++EDRI  I      +    ++     + 
Sbjct: 74  DSI---GSNAYNFKLSRRRAESVKAKLLEFGLTEDRIVGIEAMGEEQPIATNETKEGRAQ 130

Query: 331 NRRIDILVEDRQ 342
           NRR++  +  R+
Sbjct: 131 NRRVEFKLVQRE 142


>gi|170720793|ref|YP_001748481.1| OmpF family protein [Pseudomonas putida W619]
 gi|169758796|gb|ACA72112.1| OmpF family protein [Pseudomonas putida W619]
          Length = 345

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 216 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 275

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  +VL +  GV   R+  + G+   R    +   +   
Sbjct: 276 DSV---GPDAYNQKLSERRANAVKEVLTQQYGVESTRVDSV-GYGETRPVADNATEDGRA 331

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 332 VNRRVEAQVEA 342


>gi|311104908|ref|YP_003977761.1| outer membrane protein A [Achromobacter xylosoxidans A8]
 gi|310759597|gb|ADP15046.1| outer membrane protein A [Achromobacter xylosoxidans A8]
          Length = 193

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+         N +LS  RA S
Sbjct: 87  FFDFDKSTLKPEGRQLLDQVAQQARGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +RI    G        ++      + NRR++I +   +
Sbjct: 144 VKTYLVSKGIDPNRIYT-EGKGELNPIASNKTKEGRAQNRRVEIEIVGSR 192


>gi|238927470|ref|ZP_04659230.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
 gi|238884752|gb|EEQ48390.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
          Length = 308

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 9/210 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           SQ       +L +      ++   +                 +          K  QDL+
Sbjct: 40  SQTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTAPSPPTMTNGANTADAAYMKENQDLS 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +        +  +N+   V  E T  G+++ + ++    +F   S++   +   ++  I 
Sbjct: 100 EAQKKLDQYIKDNNLQDQVSTELTEEGLMVRLKEK---ALFSSGSAVLQGDAEKIVPVIA 156

Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ--VLMKSGVSEDRISKIS 313
            VLA   E ++I GHTD  P        NW LS  RA S  +  + ++  ++  R S + 
Sbjct: 157 GVLASLPERVTISGHTDNVPISTAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSAL- 215

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G++ +R   ++D     + NRR+++ +   
Sbjct: 216 GYSEYRPIASNDTEEGRAQNRRVEVFIARS 245



 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 42/126 (33%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK           +W + Y+D MT+L+A F+ ++ ++ TD    +A+ Q F      
Sbjct: 1   MARKKRGKPHEEELNEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +          P   +      + D    K + DL        +  +         +
Sbjct: 61  GGPSFFSGMGPSTAPSPPTMTNGANTADAAYMKENQDLSEAQKKLDQYIKDNNLQDQVST 120

Query: 136 NSQQSE 141
              +  
Sbjct: 121 ELTEEG 126


>gi|28869499|ref|NP_792118.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968086|ref|ZP_03396231.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
 gi|301384938|ref|ZP_07233356.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato Max13]
 gi|302061987|ref|ZP_07253528.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato K40]
 gi|28852741|gb|AAO55813.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927066|gb|EEB60616.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
 gi|330875557|gb|EGH09706.1| outer membrane porin OprF [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330967341|gb|EGH67601.1| outer membrane porin OprF [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|331016208|gb|EGH96264.1| outer membrane porin OprF [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 344

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      D E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD + S+  P ++  ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TDAGRAVNRRVEAEVEA 341


>gi|4530365|gb|AAD22005.1| major outer membrane protein [Pseudomonas fluorescens]
          Length = 343

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 273

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL    GV   R+  + G+   R    +       
Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATEAGRA 329

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 330 VNRRVEAQVEA 340


>gi|221201698|ref|ZP_03574736.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221207227|ref|ZP_03580237.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221172815|gb|EEE05252.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221178514|gb|EEE10923.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 310

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 88/291 (30%), Gaps = 20/291 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV----DLKIGSTN 119
                 N  G  +     G       P  +       +    + + +          +T 
Sbjct: 22  GAAYAQNAGGATVTPVGNGTVAASALPANAGAGSASAAASGTLVRGTAGTLAPPPANATP 81

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +        +    +   Q            ++ +    +T    S N ++        
Sbjct: 82  GQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNWSANVQKLLGAQLKQ 141

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ------- 231
             K        +++   +  +      +A ++   +    T R G+ +S  +Q       
Sbjct: 142 ISKGQLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYTIRNGLRVSASEQGLLDQTL 201

Query: 232 -RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
              T  F+  S+   P+   +L ++   LA        I GHTD          N  LS 
Sbjct: 202 ANRTIEFETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN---SGNRTSNIALSQ 258

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            RA +    L+  G+S  +++  +G    +    +D     + NRRI+  V
Sbjct: 259 ARADAVKGYLITKGISPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 308


>gi|149918478|ref|ZP_01906968.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
 gi|149820778|gb|EDM80188.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
          Length = 258

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 14/240 (5%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           D +       KQ +  E      S S  SE  + ++     + +    + +    +  + 
Sbjct: 21  DAEAQEALAAKQAEVTELQKELDSKSALSEQHEAAIAELKAEQEAHVATQEKATKLAAKV 80

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                     +    K+ K L  +     +    LV +     +        +++ + D+
Sbjct: 81  EDLESKAGSLEGELKKKDKALAAVKALQETLSKSLVEEIETGDIRVSERHGYLVVDVSDK 140

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIA-----RDN 284
               +F    +        +L ++ E L       V  + GHTD  P ++         N
Sbjct: 141 ---VLFATGEATLSERGKKLLGRLAESLLTLPKDSVFQVGGHTDNQPIKSEEVLANFPTN 197

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           W LS  RA +  + L +   V   R+    GF+  R   ++      + NRRI+I +   
Sbjct: 198 WELSASRATNVVRFLEEECSVPGARLVAA-GFSEFRPVSSNKKAKGRAKNRRIEIALLPP 256


>gi|156936052|ref|YP_001439968.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534306|gb|ABU79132.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
          Length = 411

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           +   +F  +S++       V+ ++ + + + +  I + G++D  P R+     N+ LSL 
Sbjct: 285 KGDGLFASASTVVRGRYEPVIDRVAQAMNNVSGKILVVGYSDNVPIRSARFASNYELSLA 344

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           RA S  ++L       +R+    G         ++     + NRR++I + 
Sbjct: 345 RAESVQKMLQAHLADPNRVKA-QGRGEMDPIAPNNTPENRARNRRVEITLL 394


>gi|120436663|ref|YP_862349.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578813|emb|CAL67282.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 281

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 91/241 (37%), Gaps = 12/241 (4%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           N ++ K   T  +     ++ N         +   KN    ++    ++     L K   
Sbjct: 25  NELETKQRETQDQLNTATVKLNSCLDEKESLNGQIKNLNNTNAALLNNVGDLATLSKKEA 84

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVADNIVKGVLFETTRTGIL 225
           +     L  + ++ +     +  +         + ++L G + D   + +     +  + 
Sbjct: 85  ENMERSLESIKEKDLAIRSMQDAMNKKDSVTLALVTSLKGALGDLSDEDIEINVEKGVVY 144

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARD 283
           +SI D+    +FD       P    VL K+  V+ +   +   + GHTD          D
Sbjct: 145 VSISDKL---LFDSGRYNIKPRAKEVLGKVATVVKNKPNIEFMVEGHTDDQAISTSMFED 201

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           NW LS+ RA S  +VL    G+   R++   G +++    +++     + NRR  I+V  
Sbjct: 202 NWDLSVKRATSVVRVLQDDFGIEPARMTAA-GRSYYIPVASNETAEGRAKNRRTRIVVLP 260

Query: 341 R 341
           +
Sbjct: 261 K 261


>gi|62178845|ref|YP_215262.1| hypothetical protein SC0275 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62126478|gb|AAX64181.1| putative outer membrane protein, OmpA family [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322713295|gb|EFZ04866.1| Type IV / VI secretion system, DotU [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 434

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGGAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|302185388|ref|ZP_07262061.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
           642]
          Length = 296

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 8/194 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSIKPAEPLVKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +       +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP-- 326
            TD  P        NW LS  R+ S  ++L    GV+  R++ + G+   +    +    
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAAMDGVNPARLASV-GYGEFQPIAPNTSTA 232

Query: 327 MNSANRRIDILVED 340
             + NRR+ +++  
Sbjct: 233 GRAKNRRVVLVISR 246



 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K I   +  P   S    +  + E    ++   +      +   Q + +    L 
Sbjct: 59  TERTMKPIPIGEQRP--VSIKPAEPLVKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 136 NSQQ 139
            S Q
Sbjct: 117 KSDQ 120


>gi|197117412|ref|YP_002137839.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
 gi|197086772|gb|ACH38043.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
          Length = 228

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +  +FD       PE    L +    L  S   I+I GHTD++        N  LS  R
Sbjct: 110 PSGILFDLGKDALKPEAKDALSRAAGTLKDSQTTITIEGHTDST---GSNAVNQPLSERR 166

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A      L+  GV   +++ I G+   R  + +D     + NRR+ I +   +
Sbjct: 167 ANRVRDYLVSQGVPGAKMAAI-GYGSSRPAVPNDSDANRALNRRVQIELTPNE 218


>gi|167840769|ref|ZP_02467453.1| hypothetical protein Bpse38_29109 [Burkholderia thailandensis
           MSMB43]
          Length = 405

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F   S+  +   + VL ++ + L 
Sbjct: 253 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 309

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P  +     NW LS +RA +   ++       DRI    G     
Sbjct: 310 QVPGSVRVSGYTDDTPVHSARFASNWDLSRERAEAVRGLIAARLDRPDRI-AAEGRGTLD 368

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 369 PVAPNDSPANRARNRRVEITLMLAPG 394


>gi|4580975|gb|AAD24562.1|AF117970_1 OprF [Pseudomonas viridiflava]
          Length = 344

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-I 266
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +   
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTST 268

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
           ++ GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324

Query: 326 PM--NSANRRIDILVED 340
                + NRR++  VE 
Sbjct: 325 TESGRAVNRRVEAEVEA 341


>gi|330808432|ref|YP_004352894.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376540|gb|AEA67890.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 344

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL    GV   R+  + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATEAGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 VNRRVEAQVEA 341


>gi|110633615|ref|YP_673823.1| OmpA/MotB [Mesorhizobium sp. BNC1]
 gi|110284599|gb|ABG62658.1| OmpA/MotB [Chelativorans sp. BNC1]
          Length = 217

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L A     GV        I++++        F   S+   P     L  +  
Sbjct: 75  YMDQQEAQLRAQLQGTGVSVTRQGDYIILNMPSNIT---FATDSADIQPAFYQTLNSVAL 131

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  + + GHTD++      + N +LS  RA S    L+  G    R   + G  
Sbjct: 132 VLKRYNQTLVDVYGHTDST---GSLQHNMQLSQRRAASVADYLIAQGTDSRRF-AVIGQG 187

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +   ++      + NRR++I +
Sbjct: 188 PSQPIASNATPEGRAQNRRVEIRL 211


>gi|289673277|ref|ZP_06494167.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. syringae FF5]
 gi|330977632|gb|EGH77539.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 344

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD   S+  P +   ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   +    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAEVEA 341


>gi|189423758|ref|YP_001950935.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
 gi|189420017|gb|ACD94415.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
          Length = 443

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   SI   +    L+ +G+ L         I GHTD        + N  LS  RA + 
Sbjct: 306 FDTGKSIIKKQYYDELKVVGDGLNEQKNLKGVIEGHTDNV---GSDKSNLALSQRRANAV 362

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              ++K+  +   R+    G+   +    +        NRRI+ + E+
Sbjct: 363 RDYIVKNFKIDRKRL-AAKGYGESKPIADNATAEGREQNRRIEAVFEE 409


>gi|288942206|ref|YP_003444446.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288897578|gb|ADC63414.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 225

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           + ++       L  +     +  +      L  ++       F+  S    P     L+K
Sbjct: 79  MEEQQRDFERQLAPEIASGVIRVQKLPDHQL--LVGMTGATAFEVDSDRIQPGFYSTLEK 136

Query: 255 IGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I  ++       +++ GHTD++     A  N  LS  RA S    L +SGV   RI    
Sbjct: 137 ISAIVRKYGKTQLAVSGHTDST---GAAAYNQTLSERRAASVGYYLERSGVLPQRIYSA- 192

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+  ++   ++   +    NRR+DIL+ 
Sbjct: 193 GYGMNQPIASNATEDGRRLNRRVDILIM 220


>gi|217415925|dbj|BAH03186.1| putative OmpA-family membrane protein [Edwardsiella tarda]
          Length = 576

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 6/137 (4%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               ++  +      ++   +  I+   +  +FD   S+    +   L      +     
Sbjct: 415 PPPFESEAQPTPKRVSKPKPVPKIVRLDSMSLFDSGKSVLKTGSTKWLVNSLVGIKAKPG 474

Query: 265 V-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I + GHTD +      + N  LSL RA +    +  +G   +    + G+   R    
Sbjct: 475 WLIVVSGHTDNT---GSPQLNQMLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVAT 531

Query: 324 SDP--MNSANRRIDILV 338
           +D     + NRR++I +
Sbjct: 532 NDTPEGRALNRRVEISL 548


>gi|167993292|ref|ZP_02574387.1| SciP protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205328610|gb|EDZ15374.1| SciP protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
          Length = 434

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|332666790|ref|YP_004449578.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335604|gb|AEE52705.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 495

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q +   F   S      +   L  + E +       I + GHTD          N  LS 
Sbjct: 386 QFSYVTFATGSEKLTGVSRYELDNLVEAMKEKKGLKIQLAGHTDDI---GEDAQNLALSQ 442

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            RA +  + L+  GV   R+S   GF   +   A+D     + NRR +  V
Sbjct: 443 KRADAVMKYLVSKGVDASRLSA-KGFGESQPVAANDSDDNRAQNRRTEFRV 492


>gi|330875706|gb|EGH09855.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
 gi|330967020|gb|EGH67280.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 271

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSAQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
                +N  LS DRA +   VL   GV E RI ++ G+       A+      + NRR++
Sbjct: 200 -GDREENLTLSKDRAQAVADVLTDLGVDEKRI-QVEGYGQQFPVDANASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 427

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 21/299 (7%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            +          ++L +    +  E    + S+    D S                  ++
Sbjct: 127 LQEDIDALRRLREDLESQVGRLASELEESQASAGQLRDRSRALEARLAETQETTLLAQRE 186

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            + + +          ++        +  ++    +       + + ++       L   
Sbjct: 187 IEAREIRIQDLAAGIEERDRALVEERSLTADAQARVDALRRQMQDLEQQLARLNETLRAR 246

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP------ 235
           +     ++  + DL ++++  L+  V +       F      +L  + D +         
Sbjct: 247 EETIEAQQVEIADLGERLNLALAEEVRELSRYRSEFFGRLREVLSDVEDIQIVGDRFRFQ 306

Query: 236 ---MFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRNIAR-D 283
               F+ +S+   PE    L ++   +             V+ + GHTD  P R      
Sbjct: 307 SELFFETASADIGPEGRERLDRVARTIREIDARIPGDIGWVLMVEGHTDRRPIRTEQFPS 366

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
           NW LS  RA S    L+  GV+  R+   +GF  +    A     +   NRRI++ +  
Sbjct: 367 NWELSSARAQSIVNYLISRGVAPRRL-AAAGFGEYHPLDAGSTEAAFSRNRRIEMRLSS 424


>gi|194443139|ref|YP_002039516.1| hypothetical protein SNSL254_A0308 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194401802|gb|ACF62024.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 434

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I GHTD+ P  +     N  LS  RA     +L   GV   R+  I G         +
Sbjct: 358 VTITGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416

Query: 325 DP--MNSANRRIDILVED 340
                 + NRR++ILV +
Sbjct: 417 GSKAGRAKNRRVEILVVE 434


>gi|66967954|gb|AAY59422.1| outer membrane protein A [Allochromatium vinosum]
          Length = 225

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           + ++       L  +     +  +      L  ++       F+  S    P     L+K
Sbjct: 79  MEEQQRDFERQLAPEIASGVIRVQKLPDHQL--LVGMTGATAFEVDSDRIRPGFYSTLEK 136

Query: 255 IGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I  ++       +++ GHTD++     A  N  LS  RA S    L +SGV   RI    
Sbjct: 137 ISAIVRKYGKTQLAVSGHTDST---GAAAYNQTLSERRAASVGYYLERSGVLPQRIYSA- 192

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+  ++   ++   +    NRR+DIL+ 
Sbjct: 193 GYGMNQPIASNATEDGRRLNRRVDILIM 220


>gi|114332359|ref|YP_748581.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
 gi|114309373|gb|ABI60616.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
          Length = 220

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-K 254
            +     +    A      ++ +T    ++++I        FD  S+   P    +L   
Sbjct: 73  KRMEEQKIQMENATAGTGVMVSQTADNRLMLNIPSD---ISFDTGSAQIKPGFRPILDSF 129

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +L +    ++I GHTD +        N  LS++RA S  + L   GV   RI +I G
Sbjct: 130 ATSLLNNPGTHVTIVGHTDNT---GSDAVNNPLSVNRAASTREYLAGRGVPFQRI-QIDG 185

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQG 343
              ++   +++     + NRR++I V + +G
Sbjct: 186 RGSYQPVASNNTAAGRARNRRVEIYVSETRG 216


>gi|260885301|ref|ZP_05734718.2| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
 gi|260852896|gb|EEX72765.1| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
          Length = 234

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLD 290
           +F     +        L    + L    + + + G+TD   +R  +       N  LS  
Sbjct: 110 LFQTGQDVLSSSARNDLATFAKNLTSDMD-LYVYGYTDNQGWRGASASESMNKNQVLSEQ 168

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           RA S    L  +G+S  ++ ++ GF       ++D       NRR+++ V   +
Sbjct: 169 RANSVSSYLRSNGISSSQMKEVKGFGESNPVASNDSSTGREQNRRVEVYVMPSK 222


>gi|256829593|ref|YP_003158321.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578769|gb|ACU89905.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 376

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 9/103 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           FD   S   PE    L      +        +   GHTD+         N +LS  RA +
Sbjct: 267 FDFDKSDIKPEYHQELADFASYMRQQQSFTVVEIAGHTDSV---GTDEYNQKLSERRAKA 323

Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
               L+ + G+  + +    G+   +    +D     + NRRI
Sbjct: 324 VRDYLVNELGMDTN-LFSAVGYGESKPIATNDTDAGRAENRRI 365


>gi|326942295|gb|AEA18191.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 262

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255



 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F      L   +    
Sbjct: 14  HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +      +     S++    K   + +     +  + + L+  I    N +Q
Sbjct: 71  FLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125


>gi|325953930|ref|YP_004237590.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323436548|gb|ADX67012.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 284

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K +   L   +++ L+  ++   ++ +  +  +  + IS+ D     ++   S    P  
Sbjct: 116 KSKSDSLNMVLTNNLTRSLSREEMRDIDVQVLKGVVYISLADNM---LYKSGSYEISPAA 172

Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVS 305
              L KI +++    +    I G+TD  P      R+NW LS  RA S  Q L    GV 
Sbjct: 173 GETLSKIAKIIKDYRDYDVLIEGNTDNVPINRPNIRNNWDLSALRASSVVQALQNQYGVD 232

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             R++   G   +     +        NRR  I++  +
Sbjct: 233 PKRLTAG-GRGEYNPVTTNATEEGKSKNRRTQIIITPK 269


>gi|311069471|ref|YP_003974394.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
 gi|310869988|gb|ADP33463.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
          Length = 209

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 11/188 (5%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
            + +  +            ++       K+  R  +L +K+++ +      N+   +  +
Sbjct: 25  SAVESIQKEGSGIQPDNTSINTSDAAQKKQDNRQDELLQKVNTYIQKH---NLSAKMTAK 81

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
               G+++ + +     +FD   +  L +   +L +I  +L      I + GHTD+    
Sbjct: 82  RDERGVILVLQEA---VLFDTGEAAVLKDAETLLHQIAVLLQTMPNEIQVEGHTDSRNIS 138

Query: 279 N-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
                 NW LS  RA    Q       +   R   + G+A       +   +    NRR+
Sbjct: 139 TYRYPSNWELSAARASGVIQYFTSKENLPSKRFIAV-GYADTMPVKDNKTADHMKENRRV 197

Query: 335 DILVEDRQ 342
           +I+++  +
Sbjct: 198 EIVIKKSK 205



 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 21/44 (47%)

Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           +T+++ FF++++ ++  D    K+  +     G  +   +  I
Sbjct: 1  MVTLILVFFILLFSMSQIDVQKFKSAVESIQKEGSGIQPDNTSI 44


>gi|218885922|ref|YP_002435243.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756876|gb|ACL07775.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 244

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 12/248 (4%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
               D+   ++  D              +    F++     S   K  +T   +  + + 
Sbjct: 1   MADDDDLDMESEADEPPQEWLATLADVSMLLLCFFILLFALSTIDKTKITETFDSVRTVF 60

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
              D E S +   +     L +   L  +  +  ++   ++ + L+    + I+  V F+
Sbjct: 61  GGKDKELSTSAVRSDESSALLESVRLQRQIIEAQRNTYSEMRTYLNKTGVEGIIGAV-FD 119

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF 277
                + I         MF    +   P+    L+ + +  +    + I+IRG TD S  
Sbjct: 120 EGVITLRI-----PAEVMFAPGETDLSPQAERYLKPLADLFVRKKDQSINIRGFTDDSQP 174

Query: 278 R--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
              +  RDNW LS  RA S  +  +K+G+   R++  +G         +      + NRR
Sbjct: 175 GQNSRFRDNWELSSLRAVSVLRYFLKAGIDSKRLTA-TGLGELDPLFPNTTEENRARNRR 233

Query: 334 IDILVEDR 341
           ++ ++E R
Sbjct: 234 VEFMLERR 241


>gi|146298460|ref|YP_001193051.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146152878|gb|ABQ03732.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 487

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 83/267 (31%), Gaps = 22/267 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +      G+      P+      +D S           L              ++   
Sbjct: 229 KDDACPDVAGLKQFNGCPDTDGDGIVDASDACPNEFGLAALNGCPDRDGDGVADKDDACP 288

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++     + C      D++      K          +EN   P L  +K   + +    
Sbjct: 289 DVAGLAALKGCP-----DTDGDGIADKDDKCPTVAGPKENGGCPFLDADKDGVLDKDDDC 343

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             +    S+     V+   ++ +  +         I        F         ET   L
Sbjct: 344 PTVPGPASNRGCPEVSSQALEDLKVQARA------IYFNSGKATFKTG----DKETPARL 393

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             I E+L +      SI GHTD +     A+ N +LS DRA +    L++ GV+ + +  
Sbjct: 394 DAIKEILKNYPNAKFSIEGHTDNT---GSAKINDKLSQDRANAVLNALVERGVNPENLEA 450

Query: 312 ISGFAHHRLKIASDPMN--SANRRIDI 336
             GF   +   ++      + NRR +I
Sbjct: 451 -KGFGSSQPVASNKTAAGKAQNRRTEI 476


>gi|83718191|ref|YP_438455.1| hypothetical protein BTH_II0253 [Burkholderia thailandensis E264]
 gi|167614920|ref|ZP_02383555.1| hypothetical protein BthaB_01465 [Burkholderia thailandensis Bt4]
 gi|257141504|ref|ZP_05589766.1| hypothetical protein BthaA_20174 [Burkholderia thailandensis E264]
 gi|83652016|gb|ABC36080.1| ompA family protein [Burkholderia thailandensis E264]
          Length = 437

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         +I +   R   +F   S+  +   + VL +I + L      
Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRIADALNQVPGS 346

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + G+TD +P        NW LS +RA +   ++       DRI+   G         +
Sbjct: 347 VRVSGYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLDPVAPN 405

Query: 325 DP--MNSANRRIDILVEDRQG 343
           D     + NRR++I +    G
Sbjct: 406 DSPANRARNRRVEITLMLAPG 426


>gi|330959066|gb|EGH59326.1| OmpA/MotB [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 271

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + + D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQANADFQKVKEDTDVLRSAPKDVIRSGESLARAERLSSYLGSGADVSHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLLLSQERLAKMDLERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N  LS DRA +   +LM  G+ E RI ++ G+        +      + NRR++
Sbjct: 200 -GDRQENLNLSKDRAQAVADMLMDLGIDEKRI-QVQGYGQQFPVDGNASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|229135343|ref|ZP_04264134.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
 gi|228648118|gb|EEL04162.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
          Length = 234

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E       ++++    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMLTILEN---VLFDSGKADVKLESLGIAKEMSNLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  Q +L    +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTPEGKAKNRRVEVFIL 227



 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++    K   + +     +  + + L+  I    N +Q
Sbjct: 58  SSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus]
          Length = 320

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L++ G+   RI    G   +    ++D       NRR++++V
Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEVVV 311


>gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
 gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
 gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
 gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
          Length = 320

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L++ G+   RI    G   +    ++D       NRR++++V
Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEVVV 311


>gi|4580967|gb|AAD24554.1|AF117962_1 OprF [Pseudomonas chlororaphis subsp. chlororaphis]
          Length = 325

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +  + +  ++  GHTD+         N +LS  RA + 
Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQNPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            QVL    GV   R+  + G+   R    +        NRR++  VE 
Sbjct: 276 KQVLTSQYGVESSRVQSV-GYGESRPVADNATEAGRAVNRRVEAQVEA 322


>gi|209522383|ref|ZP_03270996.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209497180|gb|EDZ97422.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 150

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD SS    P    VL ++ + L  + EV+ S+ GHTD++      + N  LS++
Sbjct: 36  PSSVTFDTSSYTIKPSFAPVLDQLAQTLQQNPEVVASVVGHTDST---GSLQYNQTLSVN 92

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + G++  R+S  +G   ++    ++     +ANRR++I +  
Sbjct: 93  RAESVTGYLTQRGIAPQRLSA-TGMGPNQPIADNNTEAGRAANRRVEIYLRA 143


>gi|66045239|ref|YP_235080.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63255946|gb|AAY37042.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 271

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 100/247 (40%), Gaps = 12/247 (4%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              + + + S D +    +        ++ I    +  ++E   + L   ++       S
Sbjct: 27  DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219
           +   +   +  N  L      K+   +++ +L     K++S        ++ +  +    
Sbjct: 87  SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
           T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++   
Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              ++N +LS DRA +   VLM  G+ E RI  + G+       A+      + NRR++I
Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGIDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDEKG 265


>gi|226943639|ref|YP_002798712.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
           DJ]
 gi|226718566|gb|ACO77737.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
           DJ]
          Length = 270

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 14/248 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL-E 164
            T +   L+     + +           LS  +     + SL R       L    D+  
Sbjct: 21  ATSSPETLRALDEARAELLAIRTEPAVRLSAEKDLARAEESLARAERFSGYLGSEDDVLH 80

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL------FE 218
            +        +      +  A +R   L+    ++   LS     N  +           
Sbjct: 81  YAYLSRRYGQIAREHGAQRQAAERLVELEKERDRLQLALSEARLLNAEQQGEWLEEQLLG 140

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T T     ++      +FD             + ++   L  +   V+ I G+TD+   
Sbjct: 141 RTTTETERGLVMTLGDVLFDTGREELRSAATRTVVQVARFLRLNQRRVVRIEGYTDSQ-- 198

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
               + N  LS  RA S   +L+  GV   R+ +++G+        +      + NRR++
Sbjct: 199 -GDDQLNLELSRGRAQSVKDMLVDLGVDAGRV-QVAGYGEAYPVAENASSQGRARNRRVE 256

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 257 IVFSDEEG 264


>gi|120613225|ref|YP_972903.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120591689|gb|ABM35129.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 296

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               K      +  +  ++ +   +   +  +     + +      +   +       + 
Sbjct: 104 DADIKKAGADAERLRLTSEADRARMQAEANARSAQQAQLQAASAEQRAADNAARVRALEA 163

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
            ++ +  + T  G+L+++ D     +F  + +    +    L K+   L    +    I 
Sbjct: 164 QLRDIEAQQTERGLLVTLGD----VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIE 219

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD+         N  LS  RA +    L++ GV+ DRI+   G+        +     
Sbjct: 220 GHTDSV---GGDAYNQSLSERRAQAVQSALVQRGVAPDRITA-RGYGKTYPVADNSSPEG 275

Query: 328 NSANRRIDILVEDRQG 343
            + NRR++I++ D +G
Sbjct: 276 RAMNRRVEIVIADEKG 291


>gi|295134908|ref|YP_003585584.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
           SM-A87]
 gi|294982923|gb|ADF53388.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
           SM-A87]
          Length = 281

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 12/240 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            ++ K   T  +     ++ N    S  + +E  K     ++    ++     L K   +
Sbjct: 26  ELEAKQKETQDQLNTATVKLNACLESKDEMTERIKVLNNTNAALLNNVGDLATLSKKEAQ 85

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVADNIVKGVLFETTRTGILI 226
                L  + ++ +     +  +         + ++L G + +     +     +  + +
Sbjct: 86  NLERSLESIKEKDLAIKSMRDAINKKDSVTLALVTSLKGAIGNMNDDDIEINVEKGVVYV 145

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDN 284
           SI D+    +FD        +   VL K+  V+ +  ++   + GHTD         +DN
Sbjct: 146 SISDKL---LFDSGRYNVTNQAREVLGKVATVIKNKPDIEFMVEGHTDDKSISTSMFQDN 202

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           W LS+ RA S  ++L    GV   R++   G +++    ++      + NRR  I+V  +
Sbjct: 203 WDLSVKRATSVVRILQDEFGVDPKRMTAA-GRSYYMPVASNATAEGRAKNRRTRIVVLPK 261


>gi|206558755|ref|YP_002229515.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
 gi|198034792|emb|CAR50659.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
          Length = 316

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 18/278 (6%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                 T +     + NP    +   +       +T    +   G      +        
Sbjct: 44  TPVGNGTVATTALPQANPNAGGASGTVVHGTAGTLTPPPANAAPGQVVVGGKVPDEATKA 103

Query: 132 FYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             L   + +    N + +              ++ K    +     +    +     E  
Sbjct: 104 AVLQKLRDTYGATNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMK 163

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             +  + + Q LA  +++TL+          V         ++       T  F+  S+ 
Sbjct: 164 GEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSAT 220

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  ++L ++   LA        I GHTD          N  LS  RA +    L+  
Sbjct: 221 LTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITK 277

Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            +   +++  +G    +    +D     + NRRI+  V
Sbjct: 278 SIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314


>gi|257462480|ref|ZP_05626892.1| Outer membrane protein [Fusobacterium sp. D12]
          Length = 217

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 78  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD++      + N  LS  RA S  Q L+  GV+ +R++   GF  +
Sbjct: 135 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLTS-QGFGPN 190

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +        NRR++I +  +
Sbjct: 191 NPVADNSTPEGRQMNRRVEIKIAPK 215


>gi|56698003|ref|YP_168374.1| hypothetical protein SPO3171 [Ruegeria pomeroyi DSS-3]
 gi|56679740|gb|AAV96406.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
          Length = 766

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 101/281 (35%), Gaps = 23/281 (8%)

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
             D Q   E S+  +  L+ +           +          + +  +     +     
Sbjct: 487 ALDAQTEAESSAARQRSLAEERAALLAQARAALSEEQAVSTEAQRQTALLNQQVAALRNQ 546

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL----AMKRKKRLQDLAKK 198
             +      +       +    +S+ ++ N  L   + E+          +KRL++ A+ 
Sbjct: 547 LGSLQALLDDYKARNASAEVQLQSLGQDLNAALARAASEERKRRLLEEAERKRLEEEARV 606

Query: 199 ISSTLSGLVA---DNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQ 253
           ++     L     +   +       + G+ I        +  +FD  S+   PE    + 
Sbjct: 607 LAEQAKDLERYRSEFFGRLRDVLGNQEGVRIEGDRFVFSSEVLFDPGSADLSPEGQFEIA 666

Query: 254 KIGEVLA--------HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS- 302
           K+  +L             VI + GHTD  P        DNW LS  RA S  + +++S 
Sbjct: 667 KVARILRAIAADIPPEINWVIRVDGHTDNVPLLGTGKYADNWELSQGRALSVVRYMVESL 726

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           G+  DR+S  +GF  ++    +D   +   NRRI++ + ++
Sbjct: 727 GLPPDRLSA-NGFGEYQPVNPADTAEARAQNRRIELKLTEK 766


>gi|325105502|ref|YP_004275156.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974350|gb|ADY53334.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 442

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +SS+        L ++   L    ++ I + GH  A         N +LS+DRA S 
Sbjct: 341 FEFNSSVLRTSAYPTLDRVSSSLRADKSKSIQLDGHASAE---GTEAYNMQLSIDRANSV 397

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L+ SGV   RI  + G+   R   ++        NRR++ 
Sbjct: 398 KTYLVNSGVDAKRI-AVKGYGESRPIASNATEEGRIKNRRVEF 439


>gi|167572001|ref|ZP_02364875.1| hypothetical protein BoklC_19324 [Burkholderia oklahomensis C6786]
          Length = 439

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F+  S+  +   + VL ++ + L 
Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVL---RGDGLFESGSTSVIDRYMPVLIRVADALN 343

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P R      NW LS +RA +   ++       DRI+   G     
Sbjct: 344 KVQGSVRVSGYTDDAPVRTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLD 402

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 403 PVAPNDSPANRARNRRVEITLMLAPG 428


>gi|300771716|ref|ZP_07081591.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761705|gb|EFK58526.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 460

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 6/135 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +G V D     + F         +   Q  +  F+  SS+   E+   L ++ + L  + 
Sbjct: 328 AGTVVDGSGCPIKFPEPVVNNYTASTGQYGSIQFEFDSSVLKTESYSTLDRLAKELRDNN 387

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             +++ G+  A         N  LS DRA +  Q L+ +GV+  +++  +G+       +
Sbjct: 388 SSVTLDGYASAE---GTEAYNMTLSKDRANAVKQYLVNAGVTAAKVTA-NGYGEANPVAS 443

Query: 324 SDPMNSA--NRRIDI 336
           +        NRR++I
Sbjct: 444 NATEEGRIQNRRVEI 458


>gi|153867892|ref|ZP_01998087.1| OmpA family protein [Beggiatoa sp. SS]
 gi|152144788|gb|EDN71913.1| OmpA family protein [Beggiatoa sp. SS]
          Length = 170

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNW 285
           +     +  F    +  LPE    + +  E++    +  +  + GHTD          N 
Sbjct: 53  LQFTLYSVFFKTGKAKLLPEGEQQITEFVELIQEYDDSRAIAVEGHTDNR---GSKAYNQ 109

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           RLS  RA +    L+  G+  +R+  I GF        +        NRR++I++   Q
Sbjct: 110 RLSKRRAETVQNALITKGIEPNRLI-IKGFGEKEPLTTNATKNGRQQNRRVEIILLKNQ 167


>gi|74316145|ref|YP_313885.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
 gi|74055640|gb|AAZ96080.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
          Length = 415

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P+ + VL +   VL   T++   + GHT           N  LS  RA S 
Sbjct: 314 FAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGHTCNI---GPEAYNQGLSERRAKSV 370

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           Y   + +GV+ DR++   G+   R   ++D       NRR+++ V+
Sbjct: 371 YDYFIDNGVAADRLTT-QGYGETRPAYSNDTREGREKNRRVELHVK 415


>gi|109900555|ref|YP_663810.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109702836|gb|ABG42756.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 215

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +   +         +    GV        + + +     +  F   ++        VL+
Sbjct: 69  AIGNYMDKQEEEFREELADSGVEVYREGDTLRLYM---PGSITFSSGNASVDSSFYPVLK 125

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +  V+    +    + GHTD +        N RLS  RA S    L+++GV   R+S +
Sbjct: 126 DVALVINKYEKTTLMVEGHTDNT---GADDMNQRLSEARANSVKNYLVQNGVDNRRVSTL 182

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338
            G   +     +        NRR+++ +
Sbjct: 183 -GMGEYTPIADNATQAGRQKNRRVELKI 209


>gi|330951673|gb|EGH51933.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 271

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N  LS DRA +   VLM  G+ E RI ++ G+       A+      + NRR++
Sbjct: 200 -GDRQENLTLSKDRAQAVADVLMDLGIDEKRI-QVEGYGQEFPVNANTSERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|325297323|ref|YP_004257240.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324316876|gb|ADY34767.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 398

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+   S    E+   L KI  ++ ++   + +RGHTD       A  N  LS  RA + Y
Sbjct: 297 FEFDKSTIKKESYPYLDKIVRLMKNTPIHVVVRGHTDNV---GDADYNMELSKKRAEAVY 353

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             L+K+GV    +     +   R    +D       NRR++  + +
Sbjct: 354 NYLLKAGVEPSHL-SYEYYGMTRPISTNDTPEGRLMNRRVEFEITE 398


>gi|300113303|ref|YP_003759878.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299539240|gb|ADJ27557.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
          Length = 283

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P    +L K+ E +       ++I G+TD+      A  N RLS  RA +A
Sbjct: 181 FGFDSAKLSPNAHTILDKVAEKMRAHPNLKVTITGYTDSI---GNADYNMRLSKLRAEAA 237

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L   G+   R+  + G    R   ++      + NRR+++
Sbjct: 238 MDYLSSEGIDPSRMEAV-GRGEERPVASNSTKEGRAKNRRVEL 279


>gi|325275390|ref|ZP_08141334.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324099474|gb|EGB97376.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 270

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 98/281 (34%), Gaps = 20/281 (7%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
                PF    + A             S+  +   +  + +  +S  L+    +  +  +
Sbjct: 1   MNRHAPFAVLAVLALAAGLQGCASQRSSAALEQASAAFQKVKDDSDVLRSAPRDVIRAGE 60

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
            L       S        ++         +   +   L  +  ++    L     +  L 
Sbjct: 61  SLARAERLSSYIGTGSDVRHYAYLSQRYSEIAGEHAKLALNQERQAKLDLERQRLQLALR 120

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   +Q   K + + ++ L ++   +G++                   +FD  S+   
Sbjct: 121 EAKLASVQQQGKWVEAQIAALASEQADRGLVMT-------------LGDVLFDTGSANLK 167

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 + K+ + L  +   +  I G+TD++       +N +LS DRA S   +L+  GV
Sbjct: 168 NTASRTVLKLVQFLQLNPHRVVRIEGYTDST---GTPEENLKLSHDRAQSVADMLVDLGV 224

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
            E R+ ++ G+       A+      + NRR++I+  D +G
Sbjct: 225 DEKRL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264


>gi|299532464|ref|ZP_07045855.1| OmpA/MotB [Comamonas testosteroni S44]
 gi|298719549|gb|EFI60515.1| OmpA/MotB [Comamonas testosteroni S44]
          Length = 214

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  P     L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 104 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSV---GSDAYNQKLSVRRA 160

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L+  G+ + R+    G    +    +      + NRR++I V   +
Sbjct: 161 EAVKAYLVSKGIEKSRVYT-EGKGEKQPVADNKTAAGRAQNRRVEIEVVGTK 211


>gi|30022590|ref|NP_834221.1| flagellar motor protein MotB [Bacillus cereus ATCC 14579]
 gi|206969568|ref|ZP_03230522.1| chemotaxis protein MotB [Bacillus cereus AH1134]
 gi|218232559|ref|YP_002369307.1| flagellar motor protein MotB [Bacillus cereus B4264]
 gi|296504987|ref|YP_003666687.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
 gi|29898148|gb|AAP11422.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
 gi|206735256|gb|EDZ52424.1| chemotaxis protein MotB [Bacillus cereus AH1134]
 gi|218160516|gb|ACK60508.1| chemotaxis protein MotB [Bacillus cereus B4264]
 gi|296326039|gb|ADH08967.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
          Length = 262

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F      L   +    
Sbjct: 14  HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +      +     S++    K   + +     +  + + L+  I    N +Q
Sbjct: 71  FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125


>gi|332161223|ref|YP_004297800.1| putative OmpA family protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318605118|emb|CBY26616.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665453|gb|ADZ42097.1| putative OmpA family protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860429|emb|CBX70737.1| hypothetical protein YEW_EP20110 [Yersinia enterocolitica W22703]
          Length = 458

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +   + V  + T +   +         MF   S    PE + V++++ + +      
Sbjct: 325 LKDEIAKQLVSVDETSSHSKVIFKGDT---MFQVGSDKVRPEIMSVIERVAQEVHRVQGA 381

Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GHTD+ P  +    +N  LS  RA +  + + K+G+  D+I +  G    +   ++
Sbjct: 382 VLIIGHTDSMPINKPGFPNNQVLSEKRAANVARFMEKAGIPTDKI-QFEGKGDTQPVSSN 440

Query: 325 DPMNSA--NRRIDILV 338
           D       NRR++I V
Sbjct: 441 DDAAGRSQNRRVEIFV 456


>gi|298529615|ref|ZP_07017018.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511051|gb|EFI34954.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 251

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             S   +    + ++LQ+  ++  + +     ++ ++G+          I++    +  +
Sbjct: 82  DTSGVLMDRATQFRQLQEAQQETFADIQYYQNEHGIEGI-VGARLDEGKITLT-LPSEVL 139

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR--NIARDNWRLSLDRAY 293
           FD       PE   +LQ + ++    +E   +I GHTD  P R      DNW +S  RA 
Sbjct: 140 FDLGEVELRPEGEELLQDMRDIFNRHSEQRINIEGHTDNIPPREGGRFEDNWEISSLRAL 199

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           +  + L + G+   R++  +G+A  +    +      + NRR++ ++E   G
Sbjct: 200 NTLRFLKQEGIDPGRMTA-TGYADLQPLYPNTTEGNRARNRRVEFVLERHIG 250


>gi|167564829|ref|ZP_02357745.1| hypothetical protein BoklE_19905 [Burkholderia oklahomensis EO147]
          Length = 439

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     V         +I +   R   +F+  S+  +   + VL ++ + L 
Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVL---RGDGLFESGSTSVIDRYMPVLIRVADALN 343

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                + + G+TD +P        NW LS +RA +   ++       DRI+   G     
Sbjct: 344 KVQGSVRVSGYTDDAPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLD 402

Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343
               +D     + NRR++I +    G
Sbjct: 403 PVAPNDSPANRARNRRVEITLMLAPG 428


>gi|78062443|ref|YP_372351.1| hypothetical protein Bcep18194_B1593 [Burkholderia sp. 383]
 gi|77970328|gb|ABB11707.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 440

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 7/145 (4%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               L  +     V         +I +   R   +F   S+  +   + VL ++ + L  
Sbjct: 287 IAKFLEPEIAAGLVSVRDDADRSVIVL---RGDGLFKSGSTSVIDRYVPVLARVADALNK 343

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               + + G+TD +P        NW LS +RA +   ++       +R+    G      
Sbjct: 344 VPGNVRVTGYTDDTPVHTARFASNWDLSRERAEAVRGMIAARLDHPERL-AAEGRGTLDP 402

Query: 321 KIASDP--MNSANRRIDILVEDRQG 343
              +D     + NRR++I +    G
Sbjct: 403 VAPNDSPANRALNRRVEITLLPAPG 427


>gi|84514671|ref|ZP_01002035.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
 gi|84511722|gb|EAQ08175.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
          Length = 533

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 20/248 (8%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           + K  S   ++Q   L   I  L N   +     ++  DS++     +   L   +N   
Sbjct: 288 EQKAQSDASQRQVAVLNEQILALRNQVGNLQSLLNIAEDSDRAA-QVQIETLGAQLNTAL 346

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA---DNIVKGVLFETTRTGILISI 228
              +    +   L    + RL+  A ++ +    L     D   +       +  I I  
Sbjct: 347 ARVVSEERQRIALEEAERSRLEAEAARLQAEAENLERFRSDFFGQLRQVLEGQDRIRIEG 406

Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF- 277
                 +  +F+   +   P+    +  +  +L             +I + GHTD +P  
Sbjct: 407 DRFVFSSEVLFEVGRADLSPQGRDEIANVAGILNDIADDIPAGIDWIIRVDGHTDDNPIA 466

Query: 278 -RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                 DNW LS  RA S  + ++   G+   R+   +GF  ++    +D     + NRR
Sbjct: 467 AGGRFADNWELSQARALSVVRFMVDDLGIPPMRL-AANGFGEYQPLNTADTAQARAQNRR 525

Query: 334 IDILVEDR 341
           I++ + +R
Sbjct: 526 IELKLTER 533


>gi|307826004|ref|ZP_07656218.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307732979|gb|EFO03842.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 266

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 12/258 (4%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            Q P + S  ++I L +   +          S  + +   +   N   +     ++    
Sbjct: 3   PQTPFQPSWLSRIPLVLLSALMTACAPSVNMSLERARSDYQQAANDPAVKADASADLFAA 62

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                  +          E             L++        K+  ++L+ K    +  
Sbjct: 63  EKLLQKAETSWQEDEDSEEIDHLSYLTSRKVDLARATASQTASKRAFEELSAK-RDEIRL 121

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE- 264
              D  +  +  +    GIL+++ D     +FD + S     ++  +  + E L    + 
Sbjct: 122 KARDAEIARLKAKKVPQGILVTLGD----VLFDTARSDLKAGSLQNIYPLVEYLKVHADT 177

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++ I GHTD       +  N +LS  RA +    L+ +GV+ +RI+   G         +
Sbjct: 178 MVKIEGHTDNQ---GSSDYNAQLSQRRAEAVRNFLVTNGVAPERITA-QGMGKDYPIATN 233

Query: 325 DPMNSA--NRRIDILVED 340
                   NRR+++ + D
Sbjct: 234 SSAAGRQQNRRVEVTITD 251


>gi|294506240|ref|YP_003570298.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
 gi|294342568|emb|CBH23346.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
          Length = 285

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 7/268 (2%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           +           P+  ++   + +    +              +  +           ++
Sbjct: 6   SPGGVGDGPAAVPQPPAEPDGNFASGPSLGTGHRPDCPLHLLSRFPFSFHMPMSSVRHST 65

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                    L        +  K   +           +   +            +   A 
Sbjct: 66  PLVLLVTALLLGGCSSLSNTEKGAIIGTGAGAAGGAAVGKAAGGTAEGAIIGAAVGGAAG 125

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +  +     A+ + + +             +   +  +FD  SS    E    L +  E
Sbjct: 126 ALIGSRMDTKAEELDEELDNADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAE 185

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +    +    + GHTDA         N +LS  RA SA + L+  GV   R++ + G  
Sbjct: 186 SMQGFEDTKILVVGHTDAQ---GSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRG 241

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                 +++       NRR+++ +   +
Sbjct: 242 ETEPVASNETEEGRQQNRRVEVAIYANE 269


>gi|150398661|ref|YP_001329128.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150030176|gb|ABR62293.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
          Length = 221

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 11/169 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
               + A         +   +    S L A     GV        I++++        F 
Sbjct: 60  DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 116

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                 +P     L  +  VL   ++  I + GHTD++     A  N  LS  RA S   
Sbjct: 117 TDRDQVIPAFYSTLDSVAIVLRKFSKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 173

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343
            L   GV + R+S + G+   R   ++        NRR++I +   +QG
Sbjct: 174 YLASRGVDQRRMSAV-GYGMERPVASNASEIGRVQNRRVEISIAPIKQG 221


>gi|294782738|ref|ZP_06748064.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
 gi|294481379|gb|EFG29154.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
          Length = 127

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            +          ++I+       FD   S+  P+   +L  + + +  +   ++I GHTD
Sbjct: 1   NIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTD 60

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331
           +       + N  LS  RA +    L++ G+ EDRI  I           ++       N
Sbjct: 61  SV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQN 117

Query: 332 RRIDILVEDR 341
           RR++  +  R
Sbjct: 118 RRVEFRLVQR 127


>gi|330943087|gb|EGH45518.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 344

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL+   GV   R++ + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNATEAGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 VNRRVEAEVEA 341


>gi|289624411|ref|ZP_06457365.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646675|ref|ZP_06478018.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867435|gb|EGH02144.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330987431|gb|EGH85534.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 271

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++
Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|237803660|ref|ZP_04591245.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025642|gb|EGI05698.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 344

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      + E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD + S+  P +   ++ + + +       +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TEAGRAVNRRVEAQVEA 341


>gi|42528265|ref|NP_973363.1| flagellar motor protein MotB [Treponema denticola ATCC 35405]
 gi|4426946|gb|AAD20620.1| flagellar motor protein MotB [Treponema denticola]
 gi|41819535|gb|AAS13282.1| flagellar motor rotation protein B [Treponema denticola ATCC 35405]
 gi|325474545|gb|EGC77731.1| flagellar motor protein MotB [Treponema denticola F0402]
          Length = 239

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +M   ++ + LA  +   +S    +     +   +   GI+IS+        F   S+  
Sbjct: 77  SMPSMEKGKMLASALKKAVSLFAPEIKTNKIAVTSDERGIVISLASD---VFFYPGSAEL 133

Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVL 299
              E+   L  + + L+          + GHTD+     N+ + NW LS  RA +    L
Sbjct: 134 NIAESRDTLLNLAQFLSSQDLASYRFRVEGHTDSGVTDPNVWKSNWELSSARAINILHSL 193

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              G  E R   ++G+A  R   ++D       NRR+DI++ D 
Sbjct: 194 TDFGAQESRF-SVAGYADTRPIFSNDTAEGRAYNRRVDIIILDD 236


>gi|261879154|ref|ZP_06005581.1| OmpA family protein [Prevotella bergensis DSM 17361]
 gi|270334253|gb|EFA45039.1| OmpA family protein [Prevotella bergensis DSM 17361]
          Length = 284

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 14/163 (8%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S       
Sbjct: 110 KSKSDSLNMVLTNNLTRSLSREEMKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRA 166

Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMK 301
              L KI +++    +    I G+TD  P    +       +NW LS  RA S  Q L+ 
Sbjct: 167 EETLGKIAKIIMDYKDYDVLIEGNTDNVPINTSSELMKNIRNNWDLSALRASSVVQYLID 226

Query: 302 S-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             GV+  R++   G        ++D       NRR  I++  +
Sbjct: 227 HFGVAPGRLTAG-GRGEFNPIASNDTALGKQRNRRTQIIITPK 268


>gi|254510549|ref|ZP_05122616.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221534260|gb|EEE37248.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 223

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 10/203 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                 N     ++  K       L  +          PL                +  +
Sbjct: 22  ADPGTLNLPADPNQNAKQGALLGGLIGAGVGAIANDSDPLLGALAGGAIGAAGGGVIGNQ 81

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    + L       G++       +++++ +      F   SS   P     L ++G+ 
Sbjct: 82  LDRQAAELRQQLANDGIIITNAGDRLIVTVPNDIT---FATDSSTVNPALRADLVRVGQN 138

Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L         + GHTD++     A  N  LS  RA S   +L  +GV+  R+S I G   
Sbjct: 139 LVRYPNSSVQVIGHTDST---GEASYNQGLSERRARSVADILQANGVNGARLSTI-GLGE 194

Query: 318 HRLKIASDP--MNSANRRIDILV 338
           +R   ++      + NRR+DI +
Sbjct: 195 NRPAASNLTPEGRARNRRVDIEI 217


>gi|302187430|ref|ZP_07264103.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 271

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 12/247 (4%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              + + + S D +    +        ++ I    +  ++E   + L   ++       S
Sbjct: 27  DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219
           +   +   +  N  L      K+   +++ +L     K++S        ++ +  +    
Sbjct: 87  SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
           T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++   
Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              ++N +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++I
Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDEKG 265


>gi|289433964|ref|YP_003463836.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|315301919|ref|ZP_07872930.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
 gi|289170208|emb|CBH26748.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|313629715|gb|EFR97837.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
 gi|313634398|gb|EFS00987.1| chemotaxis protein MotB [Listeria seeligeri FSL N1-067]
          Length = 275

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 102/326 (31%), Gaps = 69/326 (21%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    +   P+  + N +  ++DE   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKGEGPDDPNVNAVLKAMDEQDKKKQANEEEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q +     +  +    K   K +D    I   ++      S E     +   +       
Sbjct: 123 QIDSY---IQAEKLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAK------- 172

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                                        I D     +F +                   
Sbjct: 173 ----------------------------EIGD-----LFAQGKGTME------------- 186

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315
                    + GHTD  P        NW LS+ RA +  + +++    V+    S   G+
Sbjct: 187 -------GIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFSA-RGY 238

Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339
              +    +D       NRR++I+V 
Sbjct: 239 GEFKPVAKNDVATNREKNRRVEIMVR 264


>gi|238026069|ref|YP_002910300.1| OmpA/MotB [Burkholderia glumae BGR1]
 gi|237875263|gb|ACR27596.1| OmpA/MotB [Burkholderia glumae BGR1]
          Length = 355

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 16/286 (5%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +      +   +     S+                  ++        SV  +  +T  + 
Sbjct: 70  QGPSGGLSAPPQAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPPQASATPGQV 129

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                  +    +   Q            ++ +    +T    S N ++          K
Sbjct: 130 VVGGKVPDEATKAAVLQKLRDTYGAGNVVDQIEVGDVATPPNWSSNVQKLIGPQLKQISK 189

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RN 233
                    +    +  +  L   VA ++   +    T R  + +S  +Q          
Sbjct: 190 GQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQGLLDQTLANR 249

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRA 292
           T  F+  S+   P+   +L ++   ++        I GHTD          N  LS  RA
Sbjct: 250 TIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDN---SGNRASNIALSQARA 306

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            +    L+  G+   ++S  +G    +   ++D     + NRRI+ 
Sbjct: 307 DAVKGYLVAKGIPSQQLST-TGVGPDQPIASNDTAEGRARNRRIEF 351


>gi|330973477|gb|EGH73543.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 271

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 99/247 (40%), Gaps = 12/247 (4%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              + + + S D +    +        ++ I    +  ++E   + L   ++       S
Sbjct: 27  DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219
           +   +   +  N  L      K    +++ +L     K++S        ++ +  +    
Sbjct: 87  SRYSEIAREHSNLMLSQERLAKTDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
           T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++   
Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              ++N +LS DRA +   VLM  G+ E RI  + G+       A+      + NRR++I
Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGIDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDEKG 265


>gi|30249028|ref|NP_841098.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
 gi|30138645|emb|CAD84936.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 220

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-K 254
            K     +    A      V+ +T    ++++I        FD  S+   P+   +L   
Sbjct: 73  KKMEEQKIQMENATAGTGVVVSQTPDNQLMLNIPSD---ISFDTGSAQIKPDFRPILDSF 129

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +L +    ++I GHTD++        N  LS++RA S  + L   GV   RI +I G
Sbjct: 130 ATSLLNNPGTRVTIVGHTDST---GSDAVNNPLSVNRAASTREYLASRGVPFQRI-QIDG 185

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              ++   +++     + NRR++I V + +
Sbjct: 186 RGSYQPVASNNTAAGRAKNRRVEIYVSETR 215


>gi|152983975|ref|YP_001346830.1| outer membrane protein [Pseudomonas aeruginosa PA7]
 gi|150959133|gb|ABR81158.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
          Length = 261

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 89/239 (37%), Gaps = 13/239 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            T  + +L+   +N      + +        ++ +        +  + G+D      L  
Sbjct: 21  STPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        +      +  +    Q    ++ +  + L  D +   +  + T  G +
Sbjct: 81  LTNQRIELAKQTIVLRNAESQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD   S   P  +  +Q++ E L  + E    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RLS  RA S    L+  G+S +R+    G+       ++      + NRR+++ + + 
Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249


>gi|228974615|ref|ZP_04135181.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981210|ref|ZP_04141510.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
 gi|228778410|gb|EEM26677.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
 gi|228785018|gb|EEM33031.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 234

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227



 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++    K   + +     +  + + L+  I    N +Q
Sbjct: 58  SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|260595859|ref|YP_003208430.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
 gi|260215036|emb|CBA26725.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
          Length = 380

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           +   +F  +S++       V+ ++ + + + +  I + G++D  P R+     N+ LSL 
Sbjct: 254 KGDGLFASASTVVRDRYEPVIDRVAQAMNNVSGKILVVGYSDNVPIRSARFASNYELSLS 313

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           RA S  ++L        R+ +  G         ++     + NRR++I + 
Sbjct: 314 RAESVQKMLQAHLADPSRV-RAQGRGEMDPIAPNNTPENRARNRRVEITLL 363


>gi|302135199|ref|ZP_07261189.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 344

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            R   + +      D E + +          SK+   A      +   +       +   
Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCPDSDNDGVCDNVDK 208

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             +    V  +      +  ++       FD + S+  P ++  ++ + + +    +  +
Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTT 268

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD+         N +LS  RA +  QVL+   GV   R++ + G+   R    + 
Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324

Query: 326 PMNSA--NRRIDILVED 340
                  NRR++  VE 
Sbjct: 325 TDAGRAVNRRVEAEVEA 341


>gi|257125214|ref|YP_003163328.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257049153|gb|ACV38337.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 173

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 5/156 (3%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             +  +K    +L      T +  +    +  +  +  +      I+   N   FD +S+
Sbjct: 18  APSTAKKITTSNLRNNAMKTTAVEIEGVNIDDLNTKEDKIKENDIIVLDANALKFDFNSA 77

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               E   VL+K+   +      ISI G+TD+   +     N  LSL RA S  + L++ 
Sbjct: 78  TIKEEYTPVLEKLKNYIESKNHKISITGYTDS---KGTKEYNRELSLRRAESVEEKLIEL 134

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           G++ ++I +  G        ++D       NRRI+I
Sbjct: 135 GLAPEKIIETKGNGDANPIASNDTEEGRSVNRRIEI 170


>gi|313639080|gb|EFS04061.1| chemotaxis protein MotB [Listeria seeligeri FSL S4-171]
          Length = 275

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 103/326 (31%), Gaps = 69/326 (21%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    +   P+  + N +  ++DE   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKGEGPDDPNVNAVLKAMDEQDKKKQANEEEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q +     +  +    K + K +D    I   ++      S E     +   +       
Sbjct: 123 QIDSY---IQAEKLGTKMMTKYSDEGLLITIRDDILFQSGSAELSAGKREIAK------- 172

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                                        I D     +F +                   
Sbjct: 173 ----------------------------EIGD-----LFAQGKGTME------------- 186

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315
                    + GHTD  P        NW LS+ RA +  + +++    V+    S   G+
Sbjct: 187 -------GIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFSA-RGY 238

Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339
              +    +D       NRR++I+V 
Sbjct: 239 GEFKPVAKNDIATNREKNRRVEIMVR 264


>gi|167576750|ref|ZP_02369624.1| hypothetical protein BthaT_01360 [Burkholderia thailandensis TXDOH]
          Length = 437

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         +I +   R   +F   S+  +   + VL +I + L      
Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRIADALNRVPGS 346

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + G+TD +P        NW LS +RA +   ++       DRI+   G         +
Sbjct: 347 VRVSGYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLDPVAPN 405

Query: 325 DP--MNSANRRIDILVEDRQG 343
           D     + NRR++I +    G
Sbjct: 406 DSPANRARNRRVEITLMLAPG 426


>gi|71735961|ref|YP_274192.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556514|gb|AAZ35725.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 271

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++
Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|315635918|ref|ZP_07891180.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
           JV22]
 gi|315479897|gb|EFU70568.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
           JV22]
          Length = 338

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +         + +  +V+        +I  HTD+         N +LS  RA SA
Sbjct: 236 FDTAKADIKDSYNSRINEFAKVMKADPKLKANIEAHTDSV---GTDAYNQKLSERRATSA 292

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
              L+ +GV +DRI  + G+   R   ++D     + NRR++
Sbjct: 293 VNALVAAGVEKDRIKAV-GYGESRPIASNDTVEGRAENRRVE 333


>gi|238797993|ref|ZP_04641483.1| Type VI secretion system OmpA/MotB family protein [Yersinia
           mollaretii ATCC 43969]
 gi|238718198|gb|EEQ10024.1| Type VI secretion system OmpA/MotB family protein [Yersinia
           mollaretii ATCC 43969]
          Length = 446

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           R   MF   S    PE + V++++ + +      + I GHTD+ P  +    +N  LS  
Sbjct: 336 RGDTMFQVGSDKVRPEIVNVIERVAQEVHRVKGAVLIVGHTDSMPINKPGYPNNQVLSEK 395

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  + + K+G+   +I +  G    +    +D       NRR++I V
Sbjct: 396 RAANVARFMEKAGIPTGKI-RFEGKGDTQPVSRNDDAAGRSQNRRVEIFV 444


>gi|88860858|ref|ZP_01135494.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
 gi|88817071|gb|EAR26890.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
          Length = 214

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +         +    GV        + + +        F    S         L  I +
Sbjct: 73  YMDKQEQAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISTGFHDTLDAIAK 129

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V+       +SI GHTD++        N  LS  RA S    L+   + + RIS   G+ 
Sbjct: 130 VMNKYEKTFLSIEGHTDST---GKTEYNQNLSEQRALSVKNYLLNKQILDVRIST-QGWG 185

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
             R   +++     + NRR++I +   +
Sbjct: 186 ESRPIASNETSSGRALNRRVEIQIVPNK 213


>gi|327438679|dbj|BAK15044.1| flagellar motor protein [Solibacillus silvestris StLB046]
          Length = 251

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 11/160 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + ++RLQ+   ++   ++    + +      + T  G+LI+I D     +FD   +    
Sbjct: 88  EDQERLQETQNRVDEFIA---INELEDQFETKMTDEGLLITIRDS---ILFDMGRADVKA 141

Query: 247 ETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304
           E   +  ++ ++L       + I GHTD  P +      NW LS+ RA +  + ++    
Sbjct: 142 EYDTIADELAQLLMFDPPRNVVITGHTDNVPIKTPEFDSNWDLSVMRAVNFMKEIVSGNE 201

Query: 305 S-EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             + +   + GF   +    +D     + NRR+++LV+ R
Sbjct: 202 QLDSKYFSVKGFGEFQPIATNDTQEGRAKNRRVEVLVQPR 241



 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
             SW + YAD +T+L+A F+V++  ++ D+   + +   F                 Q P
Sbjct: 16  DESWLVPYADILTLLLALFIVLFASSSVDEKKLEQMSAVFTNIFTGGTGVMDNPAIIQTP 75

Query: 90  PERSSQNKIDLSIDEHITKNS 110
              +         D+   + +
Sbjct: 76  DNSTPTGISKYIEDQERLQET 96


>gi|229072015|ref|ZP_04205225.1| OmpA/MotB domain protein [Bacillus cereus F65185]
 gi|229081763|ref|ZP_04214256.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
 gi|228701608|gb|EEL54101.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
 gi|228711174|gb|EEL63139.1| OmpA/MotB domain protein [Bacillus cereus F65185]
          Length = 234

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQTKKQEEARAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++   TK   + +     +  + + L+  I    N +Q
Sbjct: 58  SSLEAEQTKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|146328667|ref|YP_001209012.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
 gi|146232137|gb|ABQ13115.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
          Length = 225

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
               +F        P     L  + + +    + I  I GHTD++     A  N  LS  
Sbjct: 104 PGDVLFATDEYQIRPNFYQTLNSVAQTMNQYPQTIVHIYGHTDST---GRAAYNQGLSER 160

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA SA Q LM+ GV+  RI    G+  +  +  +      + NRR+++ ++ 
Sbjct: 161 RANSAAQYLMQQGVNMQRILS-KGYGQNYPRANNATPDGRAQNRRVEVYIKA 211


>gi|86138055|ref|ZP_01056630.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
 gi|85825082|gb|EAQ45282.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
          Length = 477

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 7/170 (4%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +       + +         +Q L ++++     L  +     V        ++I +   
Sbjct: 306 DSGPAVELERRAPPPPPPPPIQTLEEQVAKVADFLGPEIDEGIVQVFQKGNTLIIRL--- 362

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
             + MF   S          + ++ E L      + + GH+D  P R+     N  LSL 
Sbjct: 363 AGSGMFGSGSDQLSKAFKTPVARVAEALNDEKGQVIVAGHSDNVPIRSSRFPSNMALSLA 422

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S    + +     DR+S   G A       +      + NRRI+IL+
Sbjct: 423 RAKSVMSGMAQVFDDPDRLSA-EGRAEKEPIADNGTKAGRAKNRRIEILL 471


>gi|326316785|ref|YP_004234457.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373621|gb|ADX45890.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 219

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   + +    + I  GHTD+         N +LS+ RA
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217


>gi|149377133|ref|ZP_01894882.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
 gi|149358551|gb|EDM47024.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
          Length = 222

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I + +        FD + S   P     L+ +  
Sbjct: 82  YMDKQEAQLRRKLEGSGVRVVRNGDEIELVM---PGNITFDVNQSSIKPSFSNTLESVAL 138

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      +I I GHTD++        N  LS  RA S    L+  G+   R ++ +G+ 
Sbjct: 139 VLKEFDKTIIQIEGHTDST---GSRDYNQLLSERRAGSVRDFLLNQGIEPKR-TRATGYG 194

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                 ++D  +    NRR+++ +   Q
Sbjct: 195 PRYPIASNDTESGREQNRRVELTLVPMQ 222


>gi|120611935|ref|YP_971613.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120590399|gb|ABM33839.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 219

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   + +    + I  GHTD+         N +LS+ RA
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217


>gi|254483376|ref|ZP_05096606.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
 gi|214036360|gb|EEB77037.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
          Length = 214

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L  +    GV        I + +        F+  S         VL  +G
Sbjct: 72  AYMDVQEAKLKEELQGTGVQVVREGDNIRLIM---PGNITFETDSYNLRSSFYSVLNSVG 128

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +VL+   +    + GHTD +      + N  LS  RA S    L    V   R+  + G 
Sbjct: 129 QVLSKYADTTLRVSGHTDNT---GSRQYNQTLSERRAGSVADYLATREVDRARML-VQGM 184

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342
              +    +      + NRR+++ +   Q
Sbjct: 185 GFDQPIADNGSAAGRAQNRRVELYILPNQ 213


>gi|169634041|ref|YP_001707777.1| putative outer membrane protein [Acinetobacter baumannii SDF]
 gi|169152833|emb|CAP01862.1| putative outer membrane protein [Acinetobacter baumannii]
          Length = 217

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 52/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GV   RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLAGKGVPSSRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|77458004|ref|YP_347509.1| OmpF [Pseudomonas fluorescens Pf0-1]
 gi|77382007|gb|ABA73520.1| outer membrane fibronectin-binding protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 344

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL    GV   R+  I G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSI-GYGESRPVADNKTEAGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 VNRRVEAQVEA 341


>gi|218899667|ref|YP_002448078.1| chemotaxis protein MotB [Bacillus cereus G9842]
 gi|218542530|gb|ACK94924.1| chemotaxis protein MotB [Bacillus cereus G9842]
          Length = 262

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F      L   +    
Sbjct: 14  HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +      +     S++    K   + +     +  + + L+  I    N +Q
Sbjct: 71  FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125


>gi|110639014|ref|YP_679223.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281695|gb|ABG59881.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 323

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 14/193 (7%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFE 218
           +    + +NK        + K +    +R++R+ +L K I+    +     N V   L  
Sbjct: 118 NASELEKLNKSLAKRELEVGKLQADLSERERRVNELEKIIADKERAVNELRNKVTSALLN 177

Query: 219 TTRTGILISIIDQRNTP------MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
                + I + D +         +F   S+   P+ +  L+K+  VL    ++   + GH
Sbjct: 178 YKDKDLTIQVKDGKVYVSLAEQLLFKSGSTDVDPKGVEALKKLAAVLKEQQDITIMVEGH 237

Query: 272 TDASPFR---NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           TD  P     N  +DNW LS+ RA S  ++L  +GV    +    G         +    
Sbjct: 238 TDDVPVSKGTNGIKDNWDLSVLRATSITRILTGAGVDPIHVVPA-GHGEFIPVATAKTAE 296

Query: 329 SA--NRRIDILVE 339
           +   NRR +I++ 
Sbjct: 297 ARSQNRRTEIILT 309


>gi|110636612|ref|YP_676819.1| peptidoglycan-associated outer membrane protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279293|gb|ABG57479.1| peptidoglycan-associated outer membrane protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 239

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             + +  +  R    I  +D      FD +     PE    +  +   L  +    I I 
Sbjct: 113 FDQEIRIKLIRDYARIFTLDN---VYFDVNKWNIKPECEPAIDNLYNSLTLNPNMHIEIA 169

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GHTD+      A DN  LS  RA +    L++ G+   R+    G+  ++    +D   +
Sbjct: 170 GHTDSD---GDAHDNLVLSQRRAEAVMNHLIQKGLDPKRVQA-KGYGEYKPIAPNDSPQN 225

Query: 330 --ANRRIDILVED 340
              NRR ++ V D
Sbjct: 226 KYRNRRTEVRVLD 238


>gi|332662636|ref|YP_004445424.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332331450|gb|AEE48551.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 550

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 83/278 (29%), Gaps = 16/278 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +      G+   Q  P++      D          S              Q   ++   +
Sbjct: 278 DACKDVAGLKALQGCPDQDGDGIPDKDDQCPEVAGSALFAGCPDTDGDGIQDAADDCPTV 337

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +     + C ++   D    +      +   + N+           +K  A      L+ 
Sbjct: 338 AGLATLKGCPDA-DGDGITDEKDLCPNEAGTAANQGCPDKDNDGVLDKDDACPDIAGLKQ 396

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246
                 +   G+          F  +       I  +    +        F+ +S+  L 
Sbjct: 397 FNGCPDTDNDGIEDRLDKCPTTFGLSSNNGCPEIKAEDKAVLAFAMSNVNFETNSAKLLA 456

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            ++ VL K+ E++    + +  + GHTD          N RLS  R  +    L   G+S
Sbjct: 457 SSLEVLDKVAEIMNRYPDFMLYMDGHTDNV---GEEATNLRLSESRVLACSAYLQTKGIS 513

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              I +  GF   +    +        NRR++  VE +
Sbjct: 514 AANI-RTQGFGESKPLADNKTAAGRRQNRRVEFRVEPK 550


>gi|302037673|ref|YP_003797995.1| flagellar motor protein MotB [Candidatus Nitrospira defluvii]
 gi|300605737|emb|CBK42070.1| Flagellar motor protein MotB [Candidatus Nitrospira defluvii]
          Length = 259

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K+I   +   +A  +    + ET    I+IS+ +     +F    +   PE +  L+ +
Sbjct: 93  MKEIMKKIHPSLALEMPDIKIIETGNGTIMISLPES---ILFTSGEARVRPEALPFLKSL 149

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313
            ++L      + I GHTD  P R      NW LS  RA    ++  +   V    +S  +
Sbjct: 150 AQILIEMDRHVRILGHTDNVPIRTAQFPSNWELSAVRAVMVVRIFSELYEVPISHLSA-T 208

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           GFA  +    +D       NRR++I++ ++
Sbjct: 209 GFADSKPVATNDTPEGRTKNRRVEIIILEK 238



 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   N   W + YADF+T+L AFF+VM+ +++ ++   + +          + +  
Sbjct: 3   KKKHEEHENHERWLVSYADFITLLFAFFVVMYSVSSVNEGKYRTVSDSIKAALNPVNSTP 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHI 106
                      +      D+S     
Sbjct: 63  SSRLPFAVGDAKPKMINPDMSSANEP 88


>gi|220905442|ref|YP_002480754.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869741|gb|ACL50076.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 235

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 4/200 (2%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
              TR                S +   N      + +      +   ++     I+  + 
Sbjct: 30  PPETRAGLAAYFSGDRNFDSSSTSPVSNNPFIQNTDKIDTRDIKISEVEKSHYAIAQKIK 89

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            L+  + V       +   + + +    +  MF   +   LPE   VL  +  ++     
Sbjct: 90  QLLMADSVPQSASGISADDVGVQLRVNSD-IMFKPGTVELLPEGDKVLSSVLSLMEEYNL 148

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323
            + +RGH D+          W LS  RA +    L + G+   R+  +S +   R     
Sbjct: 149 YLVVRGHADSVEAAPPYASAWELSGARAAAMVNYLAQRGIKATRMRAVS-YGDTRPLKPG 207

Query: 324 -SDPMNSANRRIDILVEDRQ 342
             +   + NRR++      +
Sbjct: 208 IDEQSRAMNRRVEFFFHRPE 227



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 40/75 (53%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
            G+WK+ YADF+T +MAFFL++W+++    +T+  +  YF+       +++  + +    
Sbjct: 2   GGAWKVAYADFVTAMMAFFLLLWVLSMVPPETRAGLAAYFSGDRNFDSSSTSPVSNNPFI 61

Query: 90  PERSSQNKIDLSIDE 104
                 +  D+ I E
Sbjct: 62  QNTDKIDTRDIKISE 76


>gi|34763583|ref|ZP_00144517.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886747|gb|EAA23886.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 157

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+    +  FD   S   P+   +L+ I E +  +   I+I GHTD+         N++
Sbjct: 28  TIVLDERSLHFDFDKSNVKPQYYDLLKNIQEFVEQNNYEITIVGHTDSI---GSNAYNFK 84

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA S    L++ G+SEDRI  I      +    +      + NRR++  +  R+
Sbjct: 85  LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 142


>gi|315497454|ref|YP_004086258.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
 gi|315415466|gb|ADU12107.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
          Length = 222

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +    + L  +     V        I++++        F   S+        VL  + 
Sbjct: 80  QYMDKQQAELRRELAGTNVTVTRNGDNIILNMPSDVT---FGSGSASIDASFYPVLNDVA 136

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L       + I GH D++        N  LS DRA S    L   GV   R+  ++G 
Sbjct: 137 SILNKYPSTYVDIVGHADST---GSDAINEPLSEDRANSTAAYLTSRGVVNQRLF-VAGM 192

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342
              +   ++      + NRR++I +   Q
Sbjct: 193 GSRQPIASNATPEGRAKNRRVEITLRPVQ 221


>gi|258625264|ref|ZP_05720172.1| outer membrane protein OmpA [Vibrio mimicus VM603]
 gi|258582437|gb|EEW07278.1| outer membrane protein OmpA [Vibrio mimicus VM603]
          Length = 328

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   P     L K+   L    +  + + GHTD+         N +LS  R
Sbjct: 215 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSEAYNQKLSEKR 271

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  + L   GV   RI+   G        ++        NRR+++++
Sbjct: 272 AQAVAKALEAQGVDAARITA-KGQDESNPIASNATAEGREKNRRVELVI 319


>gi|222150201|ref|YP_002551158.1| porin [Agrobacterium vitis S4]
 gi|221737183|gb|ACM38146.1| porin [Agrobacterium vitis S4]
          Length = 221

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +  + L A     GV        I++++        F       LP     L  +  
Sbjct: 79  YMDNQEAELRAQLQGTGVSVTRQGDRIILNMPSNIT---FPTDQDQVLPPFYPTLNSVAI 135

Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL   +  ++ + GHTD++      + N  LS  RA S    L   GV   R+S + GF 
Sbjct: 136 VLKKFNRTLVDVNGHTDST---GGLQHNQDLSQRRAESVLNYLGSQGVDPRRMSAM-GFG 191

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +    +      + NRR+++ +
Sbjct: 192 PSQPIATNATPQGRAQNRRVEVAI 215


>gi|293395553|ref|ZP_06639836.1| OmpA family protein [Serratia odorifera DSM 4582]
 gi|291421872|gb|EFE95118.1| OmpA family protein [Serratia odorifera DSM 4582]
          Length = 406

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           +   +FD +++   P  I V+ +I + +   +  I + G++D  P R+     NW LSL 
Sbjct: 278 KGDGLFDSAATTVRPAYIPVIDRIAKAMNGVSGKILVTGYSDNLPIRSARFPSNWELSLA 337

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           RA +  + L K   +  R+    G         +D     + NRR++I + 
Sbjct: 338 RAEAVSERLQKQLDNPQRVKA-EGRGDSNPVAPNDSKENRALNRRVEITLL 387


>gi|15596974|ref|NP_250468.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa PAO1]
 gi|116049726|ref|YP_791468.1| major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152985208|ref|YP_001348883.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
 gi|218892271|ref|YP_002441138.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa LESB58]
 gi|254234871|ref|ZP_04928194.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa C3719]
 gi|254240119|ref|ZP_04933441.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa 2192]
 gi|296389835|ref|ZP_06879310.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa PAb1]
 gi|313110468|ref|ZP_07796353.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa 39016]
 gi|130680|sp|P13794|PORF_PSEAE RecName: Full=Outer membrane porin F; Flags: Precursor
 gi|9947757|gb|AAG05166.1|AE004603_6 Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa PAO1]
 gi|151508|gb|AAA25973.1| porin protein F precursor [Pseudomonas aeruginosa]
 gi|4186419|gb|AAD11568.1| major outer membrane protein OprF precursor [Pseudomonas aeruginosa
           PAO1]
 gi|115584947|gb|ABJ10962.1| major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126166802|gb|EAZ52313.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa C3719]
 gi|126193497|gb|EAZ57560.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa 2192]
 gi|150960366|gb|ABR82391.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
 gi|218772497|emb|CAW28279.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa LESB58]
 gi|310882855|gb|EFQ41449.1| Major porin and structural outer membrane porin OprF precursor
           [Pseudomonas aeruginosa 39016]
          Length = 350

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++  +    FD   S     +   ++ + + +        ++ GHT
Sbjct: 221 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 280

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +   VL+ + GV   R++ + G+   R    +       
Sbjct: 281 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVADNATAEGRA 336

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 337 INRRVEAEVEA 347


>gi|75761764|ref|ZP_00741702.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74490749|gb|EAO54027.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 256

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F      L   +    
Sbjct: 14  HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
              +      +     S++    K   + +     +  + + L+  I    N +Q
Sbjct: 71  FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125


>gi|228923254|ref|ZP_04086544.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954780|ref|ZP_04116801.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960776|ref|ZP_04122414.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229048216|ref|ZP_04193785.1| OmpA/MotB domain protein [Bacillus cereus AH676]
 gi|229111973|ref|ZP_04241517.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
 gi|229129795|ref|ZP_04258762.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
 gi|229147069|ref|ZP_04275429.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
 gi|229152704|ref|ZP_04280891.1| OmpA/MotB domain protein [Bacillus cereus m1550]
 gi|229180776|ref|ZP_04308114.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
 gi|229192709|ref|ZP_04319668.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
 gi|228590799|gb|EEK48659.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
 gi|228602754|gb|EEK60237.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
 gi|228630767|gb|EEK87409.1| OmpA/MotB domain protein [Bacillus cereus m1550]
 gi|228636457|gb|EEK92927.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
 gi|228653711|gb|EEL09582.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
 gi|228671537|gb|EEL26837.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
 gi|228723203|gb|EEL74579.1| OmpA/MotB domain protein [Bacillus cereus AH676]
 gi|228798911|gb|EEM45887.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804900|gb|EEM51498.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836460|gb|EEM81811.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 234

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227



 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++    K   + +     +  + + L+  I    N +Q
Sbjct: 58  SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|326336238|ref|ZP_08202410.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691747|gb|EGD33714.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 278

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + +  +  +  + +SI D+    +F   S    P    
Sbjct: 109 RRDSINLALVQSLKGVLGNLDDQDITIQVDKGVVYVSISDKM---LFSSGSYNVTPRARE 165

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307
           VL K+ +V+ +  +    + GHTD  P +N   +DNW LS+ RA +  ++L    GV+  
Sbjct: 166 VLGKVAKVVNNKPDFEFMVEGHTDNVPIKNNCIKDNWDLSVLRATAVVRILQNDFGVTPA 225

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G + +     +      + NRR  I+V  +
Sbjct: 226 RMTAA-GRSEYVPVTTNASADGRALNRRTRIVVLPK 260


>gi|78187197|ref|YP_375240.1| OmpA family protein [Chlorobium luteolum DSM 273]
 gi|78167099|gb|ABB24197.1| OmpA family protein [Chlorobium luteolum DSM 273]
          Length = 229

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D  V G   E     I +      +  +F   S+     +   ++K+  +L    
Sbjct: 82  QAAEIDRDVDGARVERVGESIRVVF---DSGILFTTGSATITSTSRYNIEKLARILNRYP 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +   +  GHTD+         N  LS  RA S   +L   GVS  R+S + G+   R   
Sbjct: 139 DTNMVIEGHTDSI---GSETQNQLLSERRAESVATLLKTYGVSSSRLSPV-GYGETRPVA 194

Query: 323 ASDPM--NSANRRIDILV 338
           +++       NRR+++L+
Sbjct: 195 SNETETGRRQNRRVEVLI 212


>gi|254294114|ref|YP_003060137.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
 gi|254042645|gb|ACT59440.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
          Length = 487

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 7/144 (4%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L  L    + +     +       ++I   N   F+   +    E+   L K+  V   
Sbjct: 346 ELDELNGLELRQNGNNLSDVCQDAFALIMDANRIYFETGQATISRESGDTLDKLIAVARR 405

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              V I + GHTD          N RLS  RA +    L+  G  + R+S I G+   + 
Sbjct: 406 CNNVAIRVEGHTDNV---GGREANVRLSDKRAQAVADYLIGRGYPDYRLSAI-GYGSDKP 461

Query: 321 KIASDP--MNSANRRIDILVEDRQ 342
              ++     + NRRI+ +V   +
Sbjct: 462 AANNETPEGRARNRRIEFIVTSEE 485


>gi|269962960|ref|ZP_06177298.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832322|gb|EEZ86443.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 430

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +   ++ D+A++IS  L+  ++  +   V  +     + ISI  Q    +F+  S+  + 
Sbjct: 279 QTDSQVTDIAERISMYLATEISKGL---VTVDALPDRVRISIKAQD---LFESGSAEVVE 332

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVS 305
               V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  + L+ +   
Sbjct: 333 YIQPVISKLARTLEATEGKILVAGHTDDKPIFTSKYPSNWHLSLARATAMSEQLIANSAL 392

Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           + R+    G    R  + +  D   + NRRI+I + 
Sbjct: 393 KGRVLP-EGLGDARPLVDNTSDENRALNRRIEIDLM 427


>gi|84501383|ref|ZP_00999588.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
 gi|84390674|gb|EAQ03162.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
          Length = 467

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 7/147 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           ++++     L A+     V      + I I I     + MF   S    PE    L+++ 
Sbjct: 321 EQVTKVAGFLEAEIDQGLVEVFQDNSTITIRI---AGSNMFGSGSDRLQPEFDQPLERVA 377

Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L  +   + + GH+D  P R+     N  LSL RA S  Q L        R+    G 
Sbjct: 378 QALTETEGPVIVVGHSDNVPIRSSRFPSNMHLSLARAESVMQKLAGLIEDPTRLQS-EGR 436

Query: 316 AHHRLKIASDP--MNSANRRIDILVED 340
           A       +D     + NRRI+I++  
Sbjct: 437 AAKEPIDTNDTREGRARNRRIEIVLVR 463


>gi|319790576|ref|YP_004152209.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
 gi|317115078|gb|ADU97568.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
          Length = 251

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 78/191 (40%), Gaps = 10/191 (5%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
              G +  +   +  +        +  + +++  A+ R   +Q +     +        +
Sbjct: 56  GPSGSNKGERALIGAAAGAVLGGAIGYILQQQAEALGRDLGVQPVDHTNPAVKPQAPVIS 115

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIR 269
             +          + + + D     +F  +S+   PE +  LQ+I + L  +    + + 
Sbjct: 116 DKRPKAVVKEPGRVKVVLKDS---VLFGLNSAELKPEAVKELQRIAQTLKENPKTTVVVV 172

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           G+TD +      + N +LS +RA +  +VL+++GV  +RI  + G         +D    
Sbjct: 173 GYTDNT---GSLKYNLKLSKERAEAVKKVLVEAGVRPERIL-VFGCGPKNPIAPNDTPQH 228

Query: 328 NSANRRIDILV 338
            + NRR++IL+
Sbjct: 229 RALNRRVEILI 239


>gi|253582681|ref|ZP_04859902.1| outer membrane protein [Fusobacterium varium ATCC 27725]
 gi|251835551|gb|EES64091.1| outer membrane protein [Fusobacterium varium ATCC 27725]
          Length = 216

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L        V        + +++        F   SS  +P     L  I  VL
Sbjct: 78  DRQEQELRERLKNTEVQVSQKGDNLNLNL---PGGVTFATDSSNIVPSFYGPLNSIATVL 134

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E  I + G+TD       A  N  LS  RA S    L++ GVS  RIS + G+   
Sbjct: 135 VQYPETRIIVNGYTDNV---GSASYNITLSEKRAASVRNYLIQQGVSARRISYV-GYGME 190

Query: 319 RLKIASDPM--NSANRRIDILVE 339
             +  +      + NRR+++ + 
Sbjct: 191 NPRATNSTAAGRAENRRVELEIL 213


>gi|167034765|ref|YP_001669996.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166861253|gb|ABY99660.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 270

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 94/271 (34%), Gaps = 10/271 (3%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +M  +              Q          + +     +    +         + I    
Sbjct: 1   MMRRTPLAALAMLVLAAGLQGCASQRSSAALDEAGAAFQKVKDDSDVLRSAPRDVIRAGE 60

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +  ++E   + +   S+       S    +  ++     L    + K+   +++ +L   
Sbjct: 61  SLARAERLSSYIGTGSDVRHYAYLSQRYSEIASEHAKLALNQERQAKLDLERQRLQLALR 120

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++S              L        L+         +FD  S+         + K+
Sbjct: 121 EAKLASVQQQGKWVESQIAALASEQTDRGLVM---TLGDVLFDTGSADLKNSASRTVLKL 177

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + L  +   V+ I G+TD++    +A DN +LS DRA S   +L+  G+ E R+ ++ G
Sbjct: 178 VQFLQLNPRRVVRIEGYTDST---GLAEDNLKLSRDRAQSVADMLVDLGIDEKRL-QVEG 233

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           +       A+      + NRR++I+  D +G
Sbjct: 234 YGDQYPIEANASERGRAQNRRVEIVFSDDKG 264


>gi|56963749|ref|YP_175480.1| motility protein B [Bacillus clausii KSM-K16]
 gi|56909992|dbj|BAD64519.1| motility protein B [Bacillus clausii KSM-K16]
          Length = 252

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 9/194 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE         +       +E       S    L+   K    +L +  +     +    
Sbjct: 57  SETLGGQGILDNQNALDEVDEQARNTLESDPSELSEASKLERSELEQLQARLNGYIEEKQ 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIR 269
           +   +  E   +G+LI+I D     +F   S+    ++I +++++  +LA      I I 
Sbjct: 117 LADRLQTELGASGLLITIND---GILFASGSAELKSDSIELIEQLSAMLASDPPRYIQIS 173

Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P  N     NW LS  RAY+  ++  +       ++   +G+  +    +++  
Sbjct: 174 GHTDNVPMGNNEFDSNWELSSARAYNVMKLFFEYDHFEPAQL-SFAGYGEYHPITSNETA 232

Query: 328 NSA--NRRIDILVE 339
                NRR+++LV 
Sbjct: 233 EGRQANRRVEVLVL 246



 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 5/130 (3%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           ++    D   +   +W + YAD +T+L+A F+V++ +   D      ++        +  
Sbjct: 5   RRPRRHDSNTHVDETWLLPYADMLTLLVALFIVLFAMGQIDQAKYDQLK-----IVLSET 59

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
              +GI D QN  +   +   +    +    +       S  ++ Q +            
Sbjct: 60  LGGQGILDNQNALDEVDEQARNTLESDPSELSEASKLERSELEQLQARLNGYIEEKQLAD 119

Query: 138 QQSEHCKNSL 147
           +       S 
Sbjct: 120 RLQTELGASG 129


>gi|27376195|ref|NP_767724.1| hypothetical protein blr1084 [Bradyrhizobium japonicum USDA 110]
 gi|27349334|dbj|BAC46349.1| blr1084 [Bradyrhizobium japonicum USDA 110]
          Length = 464

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            +    F    +   P++  +L  + E  L   T  I + GHTDA         N  LS 
Sbjct: 357 NKGKIRFATKRADIDPDSAGILDHLIETALRCPTTNIDVAGHTDAD---GEDAFNQALSE 413

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            RA +    L+K+G+   R + I G+   +    +D  +  + NRRI+ LV 
Sbjct: 414 KRAQAVIDYLVKAGLPASRFTAI-GYGSTQPVAGNDTDDGKAQNRRIEFLVR 464


>gi|241759693|ref|ZP_04757793.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
 gi|241319701|gb|EER56097.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
          Length = 226

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        +  E     I + + +      F   S+    +    L    +
Sbjct: 76  YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGQAQSALSVAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA S    L   GVS  R+S   G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTF-GYG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
             +   ++      + NRR++IL+   Q
Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216


>gi|237654026|ref|YP_002890340.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|237625273|gb|ACR01963.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 374

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 14/217 (6%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +  E    ++ +     + L    +  + +N   +        + +   +  + L     
Sbjct: 159 EHKEMSAAAIAQVELLNRQLAAVREQLEQLNAALDAAKLAAKDKDLKLEELGRELNLALA 218

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                L+   ++   +       R  + I        +  +F  +S     + +V L ++
Sbjct: 219 GRVKELARYRSEFFGRLQEVLGKRKDVQIVGDRFVFSSEVLFASASDEVSADGMVQLTRL 278

Query: 256 GEVLA--------HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306
            E L             V+ + GHTD  P        NW LS  RA +  + L   G+  
Sbjct: 279 AETLKTLSADMPKDLPWVLQVDGHTDRRPIATARFPSNWELSTARALAIVKFLRGQGIPP 338

Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           +R+   +G+       A     +   NRRI++ +  R
Sbjct: 339 ERL-AATGYGEFHPLDARSTEEAYTRNRRIELKLTSR 374


>gi|325860437|ref|ZP_08173549.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|325482095|gb|EGC85116.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
          Length = 286

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 14/242 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           + + ++ +  Q  +     NN    S   Q    + S         +  ++ +       
Sbjct: 31  TENNQLTADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINIS 90

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +    +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ 
Sbjct: 91  KLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLA 150

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282
           D     ++   S          L KI +++    +    I G+TD  P           R
Sbjct: 151 DNM---LYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIR 207

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +NW LS  RA S  Q L    GV+  R++   G   +     +D       NRR  I++ 
Sbjct: 208 NNWDLSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIIT 266

Query: 340 DR 341
            +
Sbjct: 267 PK 268


>gi|306820525|ref|ZP_07454158.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551439|gb|EFM39397.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 437

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 17/262 (6%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G     N     S         ++  + +  +   S++   QY+  + +I  +  S+ 
Sbjct: 187 GDGSGQYFNNKAGISLQVDGKGGGQYKDEKNGIVLQVSSDGTGQYKDEKRDISIMVTSED 246

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           S              +     + + K++N          +   +         + L    
Sbjct: 247 SATYNYKSGELIISYEGDGVGSYINKALNLTIYNDGQGKADITLNGESITVDAEPLENP- 305

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G +        +       I+I +    +  +FD +      +   VL K+ +VL
Sbjct: 306 -----GRLPKLSPVPAVPPIEANSIMIKL---DSGVLFDVNKYNIRADANDVLMKLIDVL 357

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                +   I GHTD+         N  LS +RA S    L+K+G++ D      GF   
Sbjct: 358 KKGKIQKFEIYGHTDSDD---TDEYNQVLSENRANSVKDFLVKNGITAD--ITTKGFGEK 412

Query: 319 RLKIASDPMNSA--NRRIDILV 338
           +    +        NRR++I++
Sbjct: 413 KPIATNSTKEGKQLNRRVEIII 434


>gi|319762553|ref|YP_004126490.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|317117114|gb|ADU99602.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
          Length = 240

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 131 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 187

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 188 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 238


>gi|293609016|ref|ZP_06691319.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829589|gb|EFF87951.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 217

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLNKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|295675817|ref|YP_003604341.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295435660|gb|ADG14830.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 217

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD SS    P    VL ++ + L  + EV+ S+ GHTD +      + N  LS++
Sbjct: 103 PSSVTFDTSSYAIKPTFAPVLDQLAQTLQQNPEVVASVVGHTDNT---GSLQYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + G++  R+S  +G   ++    ++     +ANRR++I +  
Sbjct: 160 RAQSVTGYLTQRGIAPQRLSA-TGMGPNQPIADNNTEAGRAANRRVEIYLRA 210


>gi|221210919|ref|ZP_03583899.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221169875|gb|EEE02342.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 218

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 8/177 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            + K         ++ ++     +        ++ + ++ L A      +       GI 
Sbjct: 44  QLAKFNALEARERTRARLDDAVARTAEPQAPARVPAWVAQLEALKAGGRISLVKAPHGIE 103

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARD 283
           I I       +F    +  LP+ + VL++I + L    T  I + GHTD+ P  N     
Sbjct: 104 IGI---DAGILFHVGDAHLLPDALPVLERIAQALGPHATGDILVEGHTDSVPIANAKYES 160

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           NW LS  RA +  +   + G++  R++ + G A  +  +A D     + NRR+ I V
Sbjct: 161 NWELSSARAGAVVRYFAERGIAPHRLAAV-GRADTQPLVAGDDASSRARNRRVTIFV 216



 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 30 LGSWKIVYADFMTVLMAFFLVMWIIN 55
           G W I YAD +T LM  FL ++++ 
Sbjct: 19 SGRWLISYADLITTLMVLFLALYVLQ 44


>gi|238792655|ref|ZP_04636287.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
           29909]
 gi|238728011|gb|EEQ19533.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
           29909]
          Length = 575

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S+    +  VL      +       I + GHTD        + N  LSL 
Sbjct: 440 DSLSLFDVGQSMLKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQALSLK 496

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    +  +G   +    + G+   R   ++D       NRR++I +
Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546


>gi|332970903|gb|EGK09879.1| outer membrane protein OprF [Psychrobacter sp. 1501(2011)]
          Length = 315

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 90/306 (29%), Gaps = 18/306 (5%)

Query: 49  LVMWIIN------ATDDDTKKAIEQ-YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101
           +VM  I+       + +   K +    +N  G              N         +D  
Sbjct: 16  VVMLAISPSTFAETSTEGLIKNMPNVEWNKLGNKPFQIISTNQILDNKVNLIFIRPLDND 75

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
             E     ++D +   + Q   + ++       + S      K +        +    + 
Sbjct: 76  GPETSANIAIDGRFQVSLQPGHFSQVRYCSGNHNISIVPTGMKLNDLNTPYNHQVNFAAQ 135

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
                    +N    P   +   A  +        +     +S +VA+            
Sbjct: 136 QNHYISVDIDNATGQPTLSKIDEAQAQNILATQTEQT--HQISRIVANCPKILEPEIEPE 193

Query: 222 TGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279
             + + I    N   +F+   ++  P        +   +         I GHTD+     
Sbjct: 194 PVVKVEIGKPINLEVLFEFDKAVVQPVLNQRSMAVANFMNKYPNTSTIIEGHTDSI---G 250

Query: 280 IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            A  N +LS  RA +  Q L+ K GV+ +R+    GF   R    +        NRR+  
Sbjct: 251 AANYNMKLSQQRAEAVKQELISKYGVNPNRLIT-QGFGETRPVDTNTTEKGRYNNRRVVA 309

Query: 337 LVEDRQ 342
            +   Q
Sbjct: 310 TISAVQ 315


>gi|302670731|ref|YP_003830691.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
 gi|302395204|gb|ADL34109.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 102/327 (31%), Gaps = 63/327 (19%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              ++    L +W+  + D M +L+ FF++++ + + D    + +   F+          
Sbjct: 3   KKPEEIKPGLPAWQGTFGDLMNLLLCFFVLLFSMASMDAAKFEEVAASFSSAFSIFSGGE 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
             I       +  SQ     S                                       
Sbjct: 63  MAIGKGALIGDGVSQLTELSSYITS----------------------------------- 87

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 L +  +   +   +          E      L   + LA K +  L++      
Sbjct: 88  ----MGLAQAGDDADEERDAVGEMDQKELMEAAEEEQLEASQKLAEKIQAELEE------ 137

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                    +I   V    T   + ++I   + + +FD        + I V+ K+G++L 
Sbjct: 138 --------GDIEDVVSLNYTSQFVQLTI---QGSILFDSGKVEIKSDAIPVIDKVGQILE 186

Query: 261 HSTE-VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
                 + I GHTD  P        +N  LS  RA + +  L+++  +    +   +G  
Sbjct: 187 SYAGGTVDIEGHTDNVPMSSGGKYANNDELSSGRALAVFNYLVENTTLDPANLIH-TGRG 245

Query: 317 HHRLKIASDP--MNSANRRIDILVEDR 341
            +     +      S NRR++I + + 
Sbjct: 246 EYDPIADNSTDEGRSRNRRVEIKIYNP 272


>gi|294508627|ref|YP_003572686.1| chemotaxis motB protein [Salinibacter ruber M8]
 gi|294344956|emb|CBH25734.1| Chemotaxis motB protein [Salinibacter ruber M8]
          Length = 263

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 9/237 (3%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           ++ + V       +             Y             L   SE      +      
Sbjct: 6   MSSDEVGPNTDEDDGDDMPTAPFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNF 65

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                       +      +   + R +  A++    L  L    + + +  +  + GI 
Sbjct: 66  QRQPGMFSGSKSVVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIH 125

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284
           + I D     MF    +  L  +  VL+++  +L+     + + GHTD  P        N
Sbjct: 126 VVIADSL---MFRTGRARLLKPSRTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFPSN 182

Query: 285 WRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
           W LS  RA SA + L +        R   + G A    + ++  D   + NRR++I+
Sbjct: 183 WELSTARAASAVRFLQERAPEYDSSRFQAV-GHASTDPRASNQTDEGRAKNRRVEIM 238



 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
              D       W   Y D MT+L+ FF+++  ++       +     F         +  
Sbjct: 18  DDGDDMPTAPFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNFQRQPGMFSGSKS 77

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
            +  + +     S+ +      E   K   +  +G   Q  
Sbjct: 78  VVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQAD 118


>gi|167644153|ref|YP_001681816.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167346583|gb|ABZ69318.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 224

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 11/147 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +         GV+       I++ +        F    S   P+   VL  + 
Sbjct: 81  NYMDRQQADFRRGLEGSGVMIRRNGDQIVLVMPSDVT---FAVDKSEVQPQFTRVLDDVA 137

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
             L    +    I GH D+         N  LS  RA S    L   G V  DR+  ++G
Sbjct: 138 RTLNAYPQTTIDIVGHADS---SGPDDYNQTLSERRASSVASYLTNVGRVVPDRVF-VAG 193

Query: 315 FAHHRLKIASDP--MNSANRRIDILVE 339
               +   ++D     + NRR++I++ 
Sbjct: 194 QGERQPIASNDTPEGRAQNRRVEIILR 220


>gi|313895933|ref|ZP_07829487.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975358|gb|EFR40819.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 310

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 9/208 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q++  K      +               +    +   P +S          K  ++L++ 
Sbjct: 41  QTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEA 100

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                  +   ++   V  E +  G++I + ++    +FD  S+    +   ++  I  +
Sbjct: 101 QEKLEQYIKEHDLQDQVSTELSEDGLMIRLKEK---ALFDSGSAALQGQAEQIVPVIAAL 157

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS--GVSEDRISKISGF 315
           L    E ++I GHTD  P        NW LS  RA S  + LM +   ++  R S + G+
Sbjct: 158 LTSLPERVTISGHTDNVPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSAL-GY 216

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
           + +R   ++D     + NRR+++ +   
Sbjct: 217 SEYRPIASNDTEEGRAQNRRVEVFIARS 244



 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 50/149 (33%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK A         +W + Y+D MT+L+A F+ ++ ++ TD    +A+ Q F      
Sbjct: 1   MARKKHAKPHEEEVGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +              S +  D     ++ +N    +     ++   +    +     
Sbjct: 61  GGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTE 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            S+     +       + G    +    +
Sbjct: 121 LSEDGLMIRLKEKALFDSGSAALQGQAEQ 149


>gi|244538668|dbj|BAH82822.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +       RD  K  +   +      ++       P   +     ++ K + + + K  
Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATKQIEEKPQAKQIDKSC 200

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G + D+I                         F        PE    +Q++G+VL
Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITINPEFAQKIQEVGKVL 246

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             + +  +I  GHTD +        N +LSL+RA +  + L K+GV++++I+   G+   
Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302

Query: 319 RLKIASDP--MNSANRRID 335
           +   ++D     + NRR++
Sbjct: 303 KPIASNDTKEGRAQNRRVE 321


>gi|126724952|ref|ZP_01740795.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
 gi|126706116|gb|EBA05206.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
          Length = 218

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +    + L        V        +++++       +FD  S          L K+ 
Sbjct: 77  QSLDRQAADLEKSLDNDDVSIVNEGDRLVVTLPQD---ILFDVDSDFVSSSLRGDLYKVA 133

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L       I I GHTD       A  N  LS  RA S   +L+  GV+  R+    G 
Sbjct: 134 NNLNSYPNSTIQIIGHTDN---SGSAAHNQDLSARRAGSVSGILIDGGVAAGRVVSF-GR 189

Query: 316 AHHRLKIASDPM--NSANRRIDILVE 339
              +    +      + NRR++I++ 
Sbjct: 190 GEDQPVATNLTAEGRAENRRVEIIIL 215


>gi|257485486|ref|ZP_05639527.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331010666|gb|EGH90722.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 271

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 ETDRGLVMTLGD----VLFDAGRAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++
Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 258 IVFSDEKG 265


>gi|90022262|ref|YP_528089.1| OmpA family protein [Saccharophagus degradans 2-40]
 gi|89951862|gb|ABD81877.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 225

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        + + +        FD +      +   VL  +  
Sbjct: 85  YMDKQEAELRHQLQGTGVQVRREGNNLFLVM---PGNITFDTAQYSIRSQFYEVLDSVAV 141

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +    + GHTD       +  N  LS  RA S    LM+ GV+  R++ + G+ 
Sbjct: 142 VLKKYDKTAILVSGHTDNR---GSSDYNQTLSEQRAGSVKAYLMQKGVAAGRVNSV-GYG 197

Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339
           +     ++D       NRR+++ +E
Sbjct: 198 YRYPVASNDSAAGREQNRRVELKLE 222


>gi|260890151|ref|ZP_05901414.1| OmpA family protein [Leptotrichia hofstadii F0254]
 gi|260860174|gb|EEX74674.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 215

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S +  P+    L  +  VL    +  I + GHTD +        N  LS++RA S 
Sbjct: 110 FDINSYVIKPQFRNTLDSVATVLKTYPDSTIVVSGHTDTT---GNDAINNPLSINRASSV 166

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              L   G+S  RI+   GF   +   ++      + NRR++I +   Q
Sbjct: 167 ESYLESQGISSSRITS-RGFGSKQPIASNSTEAGRAQNRRVEIAIIANQ 214


>gi|170720329|ref|YP_001748017.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169758332|gb|ACA71648.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 237

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288
           D +   MF   S+     +   LQ +   L       I + GHTD          N  LS
Sbjct: 129 DDQGQVMFAFDSADLTAGSQQRLQSLLPRLNELGVSRIKVVGHTDNV---GSDSYNQALS 185

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             RA S  Q L+  G++  +++   G         +D     + NRR+D+ +
Sbjct: 186 ERRAASVAQYLISQGLAPQKVTS-EGRGASEPVAENDTEQGRAQNRRVDLHL 236


>gi|294783612|ref|ZP_06748936.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480490|gb|EFG28267.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
          Length = 141

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K +          ++I+       FD   S+  P+   +L  + + +  +   ++I GHT
Sbjct: 14  KNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D+       + N  LS  RA +    L++ G+ EDRI  I           ++       
Sbjct: 74  DSV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQ 130

Query: 331 NRRIDILVEDR 341
           NRR++  +  R
Sbjct: 131 NRRVEFRLVQR 141


>gi|237745869|ref|ZP_04576349.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
 gi|229377220|gb|EEO27311.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
          Length = 218

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 11/149 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             +      +       GV    T    I +SI        F  +S+   P+   +L+ +
Sbjct: 75  NHMEKQKQEMQTATQGTGVEVVQTSDNQIKVSIPSD---VSFATNSATISPQFKTILRDL 131

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L ++    I++ G+TD +        N  LS +RA S    L+  GV+ +R   + G
Sbjct: 132 ATTLKNNPSTSITVIGYTDNT---GSDAINQPLSRERAMSVRNYLVSQGVAANRF-TVEG 187

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDR 341
                   ++      + NRR++I V +R
Sbjct: 188 RGSSDPIASNLTAAGRAENRRVEIYVGER 216


>gi|254482387|ref|ZP_05095627.1| type I secretion outer membrane protein, TolC family, putative
           [marine gamma proteobacterium HTCC2148]
 gi|214037392|gb|EEB78059.1| type I secretion outer membrane protein, TolC family, putative
           [marine gamma proteobacterium HTCC2148]
          Length = 631

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 89/285 (31%), Gaps = 11/285 (3%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           ++ +   FN              +  +  +     +    I +    + +D +    + +
Sbjct: 348 RQEVTIAFNDVEALERQVEVLQRNLISQDKTRRAYRDQFDIGQRSLLDLLDSQNEYFDTQ 407

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSE---KGKDLCKSTDLEKSINKEENYFLPPL 178
           + +     ++        +         + +     K      D  +  + E    L P 
Sbjct: 408 RAHTSAVTDLGVAQARTLANMGLLLAALEMDGLNAEKIAELDLDFTRDGDDENAQALCPQ 467

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                 A+ R      L        +   A  +            +   ++       FD
Sbjct: 468 GAPLSAAVDRDALFARLNASADPAAAAASAAALAGLAAGSDRYRAVDGDMVSLEVDVQFD 527

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            +SS+        + +   VL  +     ++ GHTD+         N  LS  RA +   
Sbjct: 528 FNSSVISSAYDSEIARSAGVLRENPGVRATVEGHTDS---SGENDYNQWLSERRANAVRD 584

Query: 298 VLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +L+ + G+S +++  I G         +D     + NRR++++++
Sbjct: 585 MLINEHGISPEQLVAI-GRGEDYPIAGNDTAEDRARNRRVELVMD 628


>gi|327312584|ref|YP_004328021.1| OmpA family protein [Prevotella denticola F0289]
 gi|326944583|gb|AEA20468.1| OmpA family protein [Prevotella denticola F0289]
          Length = 288

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 14/242 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           + + ++ +  Q  +     NN    S   Q    + S         +  ++ +       
Sbjct: 33  TENNQLTADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINIS 92

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +    +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ 
Sbjct: 93  KLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLA 152

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282
           D     ++   S          L KI +++    +    I G+TD  P           R
Sbjct: 153 DNM---LYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIR 209

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +NW LS  RA S  Q L    GV+  R++   G   +     +D       NRR  I++ 
Sbjct: 210 NNWDLSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIIT 268

Query: 340 DR 341
            +
Sbjct: 269 PK 270


>gi|186470894|ref|YP_001862212.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           phymatum STM815]
 gi|184197203|gb|ACC75166.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           phymatum STM815]
          Length = 447

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF    +        ++ KI   +A     
Sbjct: 310 LKDEIAAGTVSVDEDAHHSSVTF---RGDSMFPPGGASVKATMGPLIAKIAAEIARVPGK 366

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +S+ G+TD  P R+     N  LS +RA    Q+L  +GV   R+  + G         +
Sbjct: 367 VSVLGYTDNVPIRSRQFASNDALSEERATQVMQILQAAGVPASRLEAV-GKGDADPVADN 425

Query: 325 DP--MNSANRRIDILV 338
                 + NRR++I V
Sbjct: 426 STPQGRAQNRRVEITV 441


>gi|91782349|ref|YP_557555.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|296162308|ref|ZP_06845102.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|91686303|gb|ABE29503.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
 gi|295887462|gb|EFG67286.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 217

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + +  + E +  + GHTD++        N  LS++
Sbjct: 103 PSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELIAQVVGHTDST---GQPAYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + GV+  R+S   G    +    ++     +ANRR++I +  
Sbjct: 160 RAESVTGYLGQRGVAPQRLSA-QGMGQTQPIADNNTEAGRAANRRVEIYLRA 210


>gi|78221730|ref|YP_383477.1| surface antigen protein [Geobacter metallireducens GS-15]
 gi|78192985|gb|ABB30752.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Geobacter
           metallireducens GS-15]
          Length = 218

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 12/207 (5%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                +         G        L ++I +     L   +   +        + +   K
Sbjct: 20  AQPMTRTQTGAALGTGVGAAVGAGLGQAIGRNTESTLIGAAAGALAGGLTGGAIGNYMDK 79

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
               +   VA+        +  +  + ++        +F  +S++  P     + ++ +V
Sbjct: 80  QEQAMRQAVANVEG--ASIQRDQNVLAVTFKSD---ILFPINSAVLQPGANDEITRVAQV 134

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       I+I GHTD++        N  LS  RA +    L   GV+  R++ I GF  
Sbjct: 135 LTQYPATTITIAGHTDST---GSDALNQTLSERRATAVKNALAARGVAPARMNAI-GFGK 190

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
            +    +        NRR++I +  +Q
Sbjct: 191 SKPIADNSTEAGRSMNRRVEITIVPQQ 217


>gi|261415986|ref|YP_003249669.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372442|gb|ACX75187.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 700

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 73/239 (30%), Gaps = 20/239 (8%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
              +++      L+      S            + +      L K       +    +  
Sbjct: 462 PIDSDKDGVADYLDQCPNTQSGIAVDGKGCPVDSDNDGVADYLDKCPSTPAGLPVNADGC 521

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P   K+ I+    K         +      + +D        +     ++   +D+   
Sbjct: 522 SPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKNGC 581

Query: 235 P-------------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
           P              F   S+     +   L  I ++L       + ++GHTD +     
Sbjct: 582 PNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDT---GS 638

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  +S  RA +  + L+K G+  +R+  + G+   +    +        NRR++++
Sbjct: 639 EEKNKTMSEQRAQAVVKYLVKKGIDSERLRAV-GYGSDKPIADNKTKKGRKLNRRVELV 696


>gi|156072292|gb|ABU45468.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327799|gb|ADL27000.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 700

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 73/239 (30%), Gaps = 20/239 (8%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
              +++      L+      S            + +      L K       +    +  
Sbjct: 462 PIDSDKDGVADYLDQCPNTQSGIAVDGKGCPVDSDNDGVADYLDKCPSTPAGLPVNADGC 521

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P   K+ I+    K         +      + +D        +     ++   +D+   
Sbjct: 522 SPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKNGC 581

Query: 235 P-------------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
           P              F   S+     +   L  I ++L       + ++GHTD +     
Sbjct: 582 PNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDT---GS 638

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  +S  RA +  + L+K G+  +R+  + G+   +    +        NRR++++
Sbjct: 639 EEKNKTMSEQRAQAVVKYLVKKGIDSERLRAV-GYGSDKPIADNKTKKGRKLNRRVELV 696


>gi|126640934|ref|YP_001083918.1| putative outer membrane protein [Acinetobacter baumannii ATCC
           17978]
 gi|169796935|ref|YP_001714728.1| putative outer membrane protein [Acinetobacter baumannii AYE]
 gi|184157155|ref|YP_001845494.1| outer membrane protein, related peptidoglycan-associated
           (lipo)protein [Acinetobacter baumannii ACICU]
 gi|213156662|ref|YP_002318323.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
 gi|215484397|ref|YP_002326628.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB307-0294]
 gi|239503181|ref|ZP_04662491.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB900]
 gi|260555775|ref|ZP_05827995.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
           19606]
 gi|301347224|ref|ZP_07227965.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB056]
 gi|301512729|ref|ZP_07237966.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB058]
 gi|301597873|ref|ZP_07242881.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB059]
 gi|332853740|ref|ZP_08434952.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332871140|ref|ZP_08439738.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332874156|ref|ZP_08442080.1| OmpA family protein [Acinetobacter baumannii 6014059]
 gi|126386818|gb|ABO11316.1| putative outer membrane protein [Acinetobacter baumannii ATCC
           17978]
 gi|169149862|emb|CAM87753.1| putative outer membrane protein [Acinetobacter baumannii AYE]
 gi|183208749|gb|ACC56147.1| Outer membrane protein, related peptidoglycan-associated
           (lipo)protein [Acinetobacter baumannii ACICU]
 gi|213055822|gb|ACJ40724.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
 gi|213988304|gb|ACJ58603.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260410686|gb|EEX03984.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
           19606]
 gi|322507052|gb|ADX02506.1| Putative outer membrane protein [Acinetobacter baumannii 1656-2]
 gi|323516919|gb|ADX91300.1| Outer membrane protein, related peptidoglycan-associated
           (lipo)protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332728426|gb|EGJ59801.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332731726|gb|EGJ63007.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332737631|gb|EGJ68534.1| OmpA family protein [Acinetobacter baumannii 6014059]
          Length = 217

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 52/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GV   RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLAGKGVPSSRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|301059327|ref|ZP_07200254.1| OmpA family protein [delta proteobacterium NaphS2]
 gi|300446556|gb|EFK10394.1| OmpA family protein [delta proteobacterium NaphS2]
          Length = 434

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 11/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP----MFDKSSSIPLP 246
           R Q +   I S         ++K +        +   I+          +FD + +   P
Sbjct: 283 RAQPMGITIESRQCHRGKQALIKNIRIAKGAKNLYDRIMTDGKFVTRGILFDVNKATLKP 342

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            ++ V+ +I +++    ++   I GHTD+         N +LS +RA +    L+ +GV 
Sbjct: 343 ASMGVINEIAKMMRAHEDINLRIEGHTDSD---GEKTFNQKLSEERAEAVKNALVDAGVD 399

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             R+    GF   +    +        NRR++ +
Sbjct: 400 SSRLKT-KGFGESKPVSDNTTAEGKANNRRVEFV 432


>gi|91229460|ref|ZP_01262927.1| flagellar motor protein [Vibrio alginolyticus 12G01]
 gi|91187396|gb|EAS73750.1| flagellar motor protein [Vibrio alginolyticus 12G01]
          Length = 186

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  +     +  E     I+I + ++     F + S+   P+   ++++I E++ 
Sbjct: 34  KHQESLEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 90

Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               ++ + GHTD  P  +   R NW LS  RA S  Q + K  G S  R+ ++ G A  
Sbjct: 91  DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 149

Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342
              + +D     + NRR++I +   +
Sbjct: 150 EPLLPNDSDDNRALNRRVEISIMQGE 175


>gi|313674928|ref|YP_004052924.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941626|gb|ADR20816.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 679

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 90/291 (30%), Gaps = 13/291 (4%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           + A +         + +            +  E     +      D    +     +V  
Sbjct: 399 MQAVNAAVYVKKIDFKDSSKTRFEDGGYDLTLEGGGEYQIEIVSQDYQDIQEKFIVNVPQ 458

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
                  +K Y+  +    Y+ +    +             +         +S +     
Sbjct: 459 GTYEYEIRKDYELNKAFKPYVISGIVLDEKSQKALAAELIFEMQDTVLLKTESNSDGTFE 518

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
              P + E I+  K+   L      + +        N    +        ++I      +
Sbjct: 519 VTIPKAGELIIRGKKINYLNLEEDILIADNQDFTQYNKQLLMAPIEVGKTVII------D 572

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
              F+   +     +   L ++ ++++ +  +   I GHTD+   +     N  LS  RA
Sbjct: 573 NIYFNFDKTTLKEASFPELDRLTDLMSQNPGIKIEIIGHTDS---KGSDDYNLILSEGRA 629

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            +  + L++ G++++R+    G        +++     + NRR++  +  +
Sbjct: 630 QAVMEYLLEKGIAQNRM-TFKGLGETAPISSNNTDEGRAENRRVEFTIVAK 679


>gi|149183513|ref|ZP_01861940.1| flagellar motor protein MotB [Bacillus sp. SG-1]
 gi|148848785|gb|EDL63008.1| flagellar motor protein MotB [Bacillus sp. SG-1]
          Length = 253

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 12/200 (6%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
           +                    NK E      + + +    +  + L+ L  +++  ++  
Sbjct: 59  VGGTGVMEYPTPVPETDAGDRNKNEEQNSLTVDELEAAKKREMQELKKLQDRVNGYIAA- 117

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEV 265
             + +      E T  G+L++I D     +F   S++   +   + +++  +L   +   
Sbjct: 118 --NELQTQFATELTSEGLLLTIRDN---VLFQSGSAVVGAKDEGIAKELSGLLEMDTPRS 172

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           + I GHTD  P        NW LS+ RA +    +L    +   R     GF   +   +
Sbjct: 173 VIISGHTDNVPISTANYESNWELSVMRAVNFMKIILKNQNLDP-RWFSAKGFGEFKPMAS 231

Query: 324 SDP--MNSANRRIDILVEDR 341
           +D     + NRR+++L+  R
Sbjct: 232 NDTSEGRAKNRRVEVLILPR 251


>gi|254785154|ref|YP_003072582.1| OmpA family protein [Teredinibacter turnerae T7901]
 gi|237683675|gb|ACR10939.1| OmpA family protein [Teredinibacter turnerae T7901]
          Length = 216

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    S L       GV  +     I + +        F   S    PE   VL  + +
Sbjct: 76  YMDRQESKLRQQLQGSGVQVQRDGNTINLIM---PGNITFATDSFDIKPEFHSVLDSVAQ 132

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      VI + GHTD++     A  N +LS +RA S    L+   V+  R+  + G+ 
Sbjct: 133 VLKEFKKTVIVVSGHTDST---GSATYNQQLSENRANSVRSYLLNRSVASGRVQAV-GYG 188

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                 ++        NRR+++ +E  +
Sbjct: 189 PRMPIASNKTAQGRQQNRRVELKLEPTE 216


>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 347

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD SS+   P     L ++ +  A   E  ++I GHTD+       + N +LSL RA S 
Sbjct: 235 FDTSSAKIKPAADKKLNEVVDFAAKYKESNLAISGHTDSR---GSEKLNQKLSLSRAESV 291

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI--LVEDRQ 342
              L+K GVS  RI+   G A  R    +      + NRR++I  +V + +
Sbjct: 292 KAYLVKKGVSAARITT-KGEASTRPVADNKTKAGRAQNRRVEINSVVRESK 341


>gi|218886185|ref|YP_002435506.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757139|gb|ACL08038.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 241

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 11/208 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               K +L       + L  S+++    N      +  L        + +K    +A+K+
Sbjct: 32  PPETKQALAGYFSTERSLFDSSNVSPVANNPFVQGVDKLDTRDFKVSETEKSHYAIAQKL 91

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +          G+  +     + ++     +  MF   S+  +PE   VL ++ ++L
Sbjct: 92  KQMMMADAIPQNASGISADDVGVLLRVN-----SDVMFKAGSAELVPEGSRVLDEVIKIL 146

Query: 260 AHSTEVISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
                 + +RGH+D+      +    NW LS  RA +A + +++  G+   R+  I+ +A
Sbjct: 147 REYNLYLMVRGHSDSGEVAAGSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIA-YA 205

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
             R    +    S   NRR++      +
Sbjct: 206 DTRPMEPNTTPESRSKNRRVEFHFHRPE 233



 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
              GSWK+ YADF+T +MAFFL+MWI+N T  +TK+A+  YF+   ++L  +S       
Sbjct: 2   AGGGSWKVAYADFVTAMMAFFLLMWILNMTPPETKQALAGYFS-TERSLFDSSNVSPVAN 60

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           NP  +              T+ S         Q      +  N   +S   
Sbjct: 61  NPFVQGVDKLDTRDFKVSETEKSHYAIAQKLKQMMMADAIPQNASGISADD 111


>gi|170722686|ref|YP_001750374.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169760689|gb|ACA74005.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 270

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 20/278 (7%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F P     + A  G          ++         + +  +S  L+    +  +  + L 
Sbjct: 4   FKPMAALALLALAGGLQGCASQRSAAALDDASVAFQKVKDDSAVLRSAPRDVIRAGESLA 63

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                 S        ++         +   +   L  S  +     L     +  L   +
Sbjct: 64  RAERLSSYIGTGSDVRHYAYLSQRYSEIAGEHAKLALSQERLAKLDLERQRLQLALREAK 123

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +Q   + + + ++ L +    +G++                   +FD   +      
Sbjct: 124 LASVQQQGEWVEAQIAALASQQADRGLVMT-------------LGDVLFDTGRADLKNSA 170

Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              + K+ + L  +   V+ I G+ D +       DN +LS DRA +   +L+  GV E 
Sbjct: 171 SRTVLKLVQFLQLNPRRVVRIEGYADNT---GAPEDNLKLSRDRAQAVADMLVDLGVDEK 227

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           R+ ++ G+       A+      + NRR++I+  D +G
Sbjct: 228 RL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264


>gi|319793582|ref|YP_004155222.1| type IV / vi secretion system protein, dotu family [Variovorax
           paradoxus EPS]
 gi|315596045|gb|ADU37111.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus EPS]
          Length = 456

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 10/178 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            ++    +     ++  ++    R   +     ++   L   + + +   +         
Sbjct: 272 FNLAGNSDGAFAAVNAVRLPQTARAVVMPAPQPRLQRFLEPEIREGL---LTVRDEADRS 328

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARD 283
           ++ +   R   +F   S   L   + VL ++ + L      + + G +D  P R+     
Sbjct: 329 VVVL---RGDGLFASGSDRVLDRYVPVLSRVADALNSVEGNVLVSGFSDDQPIRSVRFPS 385

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           NW+LS  RA S  ++L       +R+ +  G         +D     + NRR+++ + 
Sbjct: 386 NWQLSQARADSVKKMLAVRITRPERL-RAEGRGDADPLAPNDSPANRARNRRVEVTLL 442


>gi|238757108|ref|ZP_04618295.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
           ATCC 35236]
 gi|238704486|gb|EEP97016.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
           ATCC 35236]
          Length = 438

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S    PE + V++++ + +      + I GHTD+ P  +    +N  LS  
Sbjct: 328 KGDTMFQVGSDKVRPEIMSVIERVAQEVHRVQGAVLIIGHTDSMPINKPGFPNNQVLSEK 387

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  + + K+G+  D+I +  G    +   ++D       NRR++I V
Sbjct: 388 RAANVARFMEKAGIPTDKI-RFEGKGDAQPVSSNDDAAGRSQNRRVEIFV 436


>gi|228903029|ref|ZP_04067168.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
 gi|228967605|ref|ZP_04128628.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792096|gb|EEM39675.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856622|gb|EEN01143.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
          Length = 234

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227



 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F      L   +       +      +    
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            S++    K   + +     +  + + L+  I    N +Q
Sbjct: 58  SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97


>gi|162456349|ref|YP_001618716.1| exported OmpA domain-containing protein [Sorangium cellulosum 'So
           ce 56']
 gi|161166931|emb|CAN98236.1| exported OmpA domain protein [Sorangium cellulosum 'So ce 56']
          Length = 610

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 88/307 (28%), Gaps = 24/307 (7%)

Query: 49  LVMWIIN--ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           + M         D  +  I         ++     G   +   P    ++   +   E  
Sbjct: 300 VAMAAFTPEQPTDQDRDGIGD-LEDACPSVPGVRSGDPKKNGCPPPPDRDADGIVDAEDA 358

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                 ++     +       + +   + +++ +      +  D  K        D +  
Sbjct: 359 CPAVAGVRSDDPKKNGCPPPPDRDADGIVDAEDACPAVAGVRSDDPKKNGCPPDRDDDGV 418

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKI--------SSTLSGLVADNIVKGVLFE 218
            + E+        + K  A     R  D                 +    +         
Sbjct: 419 ADAEDACPDVKGVRSKDPAKNGCPRDTDGDTFRDDVDACPREKGFADPDPEKNGCPKAVR 478

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASP 276
            T   ++I          FD   +   P +  +L ++ EVL    E++ I   GHTD   
Sbjct: 479 VTEKHVVI-----LQQVQFDTDKATIKPVSDPLLDEVAEVLKEHPEIVLIEIQGHTDNR- 532

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                  N  LS +RA S    L++ G+   R++   G+   +    +        NRR+
Sbjct: 533 --GTVEHNRILSQNRANSVMAALVRRGIDSTRLTA-QGYGREQPIDDNATEAGRQRNRRV 589

Query: 335 DILVEDR 341
              +  +
Sbjct: 590 QFNIIKK 596


>gi|188581568|ref|YP_001925013.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
 gi|179345066|gb|ACB80478.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
          Length = 337

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           + Q        L   ++ I D  +        +          +N++       ++ +  
Sbjct: 43  LSQELTGRDAVLNRLNRQIADLTDLLALERSGRRAQEEAAAGLRNTLTATEAERDRLRAL 102

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                     S    ++           + +      +  +++ ++       L+  +  
Sbjct: 103 ADASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235
             + + R+ +L  +++  L+  V +       F      I+ S  D R         +  
Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQIIGSRTDVRIVGDRFVLQSEV 221

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +F   S+   PE    L +I   +        A    V+ + GHTDA P ++     NW 
Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAKEIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           LS  RA +  Q L   G+   R+   + F   +   +    +  + NRRI++ + +R
Sbjct: 282 LSAARAIAVVQYLRTKGIPPQRLLAGA-FGEFQPLDSGTSEDAYARNRRIEMKLTER 337


>gi|146343548|ref|YP_001208596.1| putative outer membrane protein (ompA-like) [Bradyrhizobium sp.
           ORS278]
 gi|146196354|emb|CAL80381.1| conserved hypothetical protein; putative outer membrane protein
           (ompA-like) [Bradyrhizobium sp. ORS278]
          Length = 464

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 9/276 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           +        L    K   +E   P    Q   D          +V  +           R
Sbjct: 195 EALATALAKLPDGFKVASNEVRAPPYIFQAYKDPVAVTVTLSGNVPDENIHAVVVGSSSR 254

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              +   + N + S     +                    +  + +  +   +     A 
Sbjct: 255 KFFSEKVVDNLKNSVGAPANFVNAVVPALGALSRLSTGTLVVSDRDIKISGDALYDAAAA 314

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  L     +     + +        V     +      +   +    F+   S    
Sbjct: 315 QIRTGLAKDVPQGWQVKAEITVKPAAAPVDPTVCQQLFSDLLGKAKIR--FETGRSDLDR 372

Query: 247 ETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           ++  +L ++ E+     T  + I GHTDA      +  N  LS  RA +    L+K+G+ 
Sbjct: 373 DSTGLLDRLVEIAFRCPTANVDIIGHTDAE---GDSAANQVLSQKRAQAVADYLVKAGLP 429

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            DR + I G+   +   ++D       NRRI+ +V 
Sbjct: 430 ADRFTPI-GYGSTQPIASNDTAEGRTQNRRIEFVVR 464


>gi|4580973|gb|AAD24560.1|AF117968_1 OprF [Pseudomonas resinovorans]
          Length = 340

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 18/249 (7%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                          H + +++  + G  +            ++  N             
Sbjct: 106 TPGVGLRPYVSGGFAHQSISNIPDRSGRDHSTFANVGTGLKYYFTENFFAKASLDGMYNL 165

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D+++ + +             +    P    E            ++ K   +  +     
Sbjct: 166 DAQESEWMAGVGVGVNFGGSTKQEPAPAPVAEVCADSDNDGVCDNVDKCPDTPAN----- 220

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISI 268
                V  +      +  ++       FD   +    E+   ++ + + +        ++
Sbjct: 221 -----VTVDADGCPAVAEVVRVELDVKFDFDKAKVKEESYGDIKNLADFMNQYPATTTTV 275

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327
            GHTD+         N +LS  RA +   VL+   GV  +R++ + G+   R    +   
Sbjct: 276 EGHTDSV---GTDAYNQKLSERRADAVRDVLVDQYGVGSERVNAV-GYGETRPVADNATA 331

Query: 328 NSA--NRRI 334
           +    NRR+
Sbjct: 332 DGRAVNRRV 340


>gi|330824570|ref|YP_004387873.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329309942|gb|AEB84357.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 219

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217


>gi|319787272|ref|YP_004146747.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465784|gb|ADV27516.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 226

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                  + L A     GV        I +++        F  +S+   P+   VL  + 
Sbjct: 84  AYQDRQQNALRAKLQGTGVSVTRNGDNITLNM---PGNVTFGFNSANLDPQFYPVLSSVA 140

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           EVL      V+ + GHTD+         N RLS  RA +  Q L+   ++  R   + G 
Sbjct: 141 EVLREYDKTVVEVAGHTDSV---GGDEVNQRLSEQRANAVTQFLVSQNINPQRFITV-GA 196

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
                  ++D     +ANRR++I +
Sbjct: 197 GKRYPIASNDTEAGRAANRRVEITL 221


>gi|107101208|ref|ZP_01365126.1| hypothetical protein PaerPA_01002240 [Pseudomonas aeruginosa PACS2]
          Length = 331

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++  +    FD   S     +   ++ + + +        ++ GHT
Sbjct: 202 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 261

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +   VL+ + GV   R++ + G+   R    +       
Sbjct: 262 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVADNATAEGRA 317

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 318 INRRVEAEVEA 328


>gi|149279062|ref|ZP_01885196.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
 gi|149230341|gb|EDM35726.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
          Length = 439

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 100/313 (31%), Gaps = 45/313 (14%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
             FN      + AS G        +  + +          T + + + +G   + K   +
Sbjct: 130 DMFNKNNALQLYASAGAGLAGYKVKTGAASSSLTPYANDKTISELIVPVGLGAKFKLSDK 189

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           +  ++ +  N    ++        ++K        +      K++  +  P++     A+
Sbjct: 190 INLDLGWTVNFVDGDNLDGVYKEGNDKYSYAYGGLEFSLGAGKQQLAWHNPVALTYDEAL 249

Query: 187 KRKKRLQDLAKKISSTLSG---------------------------------LVADNIVK 213
           K K+    L  ++ +  +                                   V D    
Sbjct: 250 KAKQTANALKAEVDAQKADNARLRGQIDDLLKDSDDDGVADKLDKCPGTPAGTVVDGSGC 309

Query: 214 GVLFETTRTGILISIIDQR------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
            +        ++I+  D+R          FD   ++   ++   L ++  +L      + 
Sbjct: 310 PLKTPAPVEKVIITEADRRVVDEAIKNLEFDLGKAVIRQKSYATLNRVAALLIEKNFSLK 369

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + GHTD +        N RLS DRA S    L+  G +  RI   +G+  ++    +   
Sbjct: 370 LAGHTDNT---GSMALNLRLSKDRAESVKAYLVSQGANASRIEA-TGYGPNQPIATNKTA 425

Query: 328 NSA--NRRIDILV 338
                NRR++  +
Sbjct: 426 AGRQANRRVEFTL 438


>gi|161521534|ref|YP_001584961.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189352297|ref|YP_001947924.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
 gi|160345584|gb|ABX18669.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189336319|dbj|BAG45388.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
          Length = 219

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 8/170 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                       A   +        ++ + ++ L A      +       GI I I    
Sbjct: 52  DARERTRVRLDDAAPARTAEPQAPARVPAWVAQLDALKAGGRISLVQAPHGIEIGI---D 108

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290
              +F    +  LP+ + VL++I + L       I + GHTD+ P  N     NW LS  
Sbjct: 109 AGILFHVGDAHLLPDALPVLERIAQALGPHAAGDILVEGHTDSVPIANAKYESNWELSSA 168

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           RA +  + L + G++  R++ + G A  +  +A D     + NRR+ I V
Sbjct: 169 RAGAVVRYLAERGIAPHRLAAV-GRADTQPLVAGDDASSRARNRRVTIFV 217



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 3/129 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   D      G W I YAD +T LM  FL ++++         A++       +    A
Sbjct: 9   RDDEDAEGTQSGRWLISYADLITTLMVLFLALYVLQ---LAKFNALDARERTRVRLDDAA 65

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                + Q P    +      ++      + V    G                +L     
Sbjct: 66  PARTAEPQAPARVPAWVAQLDALKAGGRISLVQAPHGIEIGIDAGILFHVGDAHLLPDAL 125

Query: 140 SEHCKNSLT 148
               + +  
Sbjct: 126 PVLERIAQA 134


>gi|91786221|ref|YP_547173.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
           JS666]
 gi|91695446|gb|ABE42275.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
           JS666]
          Length = 607

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 22/215 (10%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             ++ ++        +T  + K  D+  + D  +     +   L P  +  +  M++ K 
Sbjct: 408 QIIAQARTLAGMGQLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKA 467

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
              +  +  +T++      +   +                    +FD   S         
Sbjct: 468 GTVIPPRARATVAPAPGQALPAKISLSADT--------------LFDFDKSTIKAGGTGK 513

Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  + + L      + I  GHTD+         N RLSL RA S    L+  GV   RI 
Sbjct: 514 LDALVDRLKGVNVDVVIAVGHTDSV---GTDAYNQRLSLARADSVKAYLVSKGVDRQRI- 569

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDI-LVEDRQ 342
           +  G    +    +      + NRR+DI +VE R 
Sbjct: 570 RTEGRGESQPVADNATAEGRAKNRRVDIEVVEARP 604


>gi|83644388|ref|YP_432823.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83632431|gb|ABC28398.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 219

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 10/149 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    S L       GV        I + +        FD   +         L  +G 
Sbjct: 78  YMDKQESELRHRLEGTGVRVVRNGDEITLVM---PGNITFDTGRAEVKANFYDTLDSVGL 134

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      +I + GHTD++        N RLS  RA S  + L+  GV   R+  I G+ 
Sbjct: 135 VLKEFDKTIIQVSGHTDST---GSLDLNQRLSEQRAGSVGRYLISQGVLSSRVQTI-GYG 190

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343
                  +      +ANRR+++ +   QG
Sbjct: 191 PRYPVATNSTTEGRAANRRVELKLVPMQG 219


>gi|332975480|gb|EGK12371.1| OmpA/OmpF family outer membrane protein OprF [Psychrobacter sp.
           1501(2011)]
          Length = 318

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 13/180 (7%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           +          L P S +  +    +     L + +S                       
Sbjct: 136 QPQQTYYYQVSLDPQSNKASINPVEEAVALQLLQGLSEQTHQKNRVEAKDCTTITQETET 195

Query: 224 ILISIIDQRNTP-----MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
           +      + NTP     +FD  S+   P     L+++ + L+ +    +I  GHTD++  
Sbjct: 196 VEPPARVEVNTPITLDVLFDFDSAKIKPTYQQRLREVAQFLSANANTKAILEGHTDST-- 253

Query: 278 RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
              A  N  LS  RA +  + L+ K G+  +R++   G+   +    +        NRR+
Sbjct: 254 -GPASYNLTLSQARAEAVKKELVNKHGIDPNRLTT-QGYGESKPIDNNSTVQGRQNNRRV 311


>gi|325121211|gb|ADY80734.1| OmpA domain protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 217

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLNKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|262068028|ref|ZP_06027640.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
 gi|291378250|gb|EFE85768.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
          Length = 403

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 10/274 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   +     +    DE    +R+       +         V+            +    
Sbjct: 132 NKTVQTDGNGAGQYADENVTIQRNEDGSGQYTNKVTGVTLQVNPDGSGQFIDTINKFAYQ 191

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +     E     +T D +       +  +E +++    Y             K K
Sbjct: 192 IEADGAGQYVDEKNNVKITIDRKGSIYTNNNITIENNVDGSGTYSDTDKDLLIKNDGKGK 251

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
             +    K                 +        I  +  +I   +  +FD       PE
Sbjct: 252 AIITLKGKTTEVEARPFERFEKFPKLKMVPPIPSIEANSLLITLDSGILFDVDKYDVRPE 311

Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             V L+ +  VL  +  +   I GHTD+         N  LS +RA +    L   G++ 
Sbjct: 312 AEVALKNLAVVLKEADVKAFQIDGHTDSD---ASDEHNQVLSENRANAVKSFLAAQGLTA 368

Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           +    I+G+   R   ++D       NRR++I++
Sbjct: 369 E--ISINGYGESRPIASNDTAEGKQKNRRVEIII 400


>gi|198276042|ref|ZP_03208573.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
 gi|198271671|gb|EDY95941.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
          Length = 280

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 18/245 (7%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
             ++        + Q     N +  +    Q    +   +R     +   +      +  
Sbjct: 32  GRIEALSRGDKLQGQLNECHNEMDKMRG--QIAQLQQDTSRKGTSIRHYQQLLSSNMNEQ 89

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-------DNIVKGVLFETTR 221
           ++ N  L    KE     K  + LQ +  + ++ +  L+              +      
Sbjct: 90  EKLNALLGEKLKELDEREKTIQELQSMIDQQNAQVQNLLNSVKDALLGFSSDELTVREQN 149

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
             + +++ D+    +F   S+         L K+ EVL   TE+   I GHTD  P    
Sbjct: 150 GKVYVAMSDKL---LFQSGSAKLDKRGEEALGKLAEVLNKQTEIDVCIEGHTDNKPIHTA 206

Query: 281 AR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              DNW LS+ RA S  ++L++   V+  +I + SG         ++     + NRR +I
Sbjct: 207 QFKDNWDLSVIRATSVVRILIEKYKVNPLQI-QPSGRGEFMPVADNETAEGRAKNRRTEI 265

Query: 337 LVEDR 341
           ++  +
Sbjct: 266 IMSPK 270


>gi|256846182|ref|ZP_05551640.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294784699|ref|ZP_06749987.1| OmpA family protein [Fusobacterium sp. 3_1_27]
 gi|256719741|gb|EEU33296.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294486413|gb|EFG33775.1| OmpA family protein [Fusobacterium sp. 3_1_27]
          Length = 195

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 7/148 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +  ++++     +      L E     + I + D+     FD   S   P+   +L  +
Sbjct: 30  KRMRANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSFVKPQYDEMLTNL 87

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            E +  +   ++I GHTD   +    + N  LS  RA +    L++ G+   RI  I   
Sbjct: 88  KEFIMKNDYELTIEGHTD---YIASNQYNMGLSKRRAEAVKVKLIELGLDPSRIVAIVPK 144

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341
                   +      + NRR++  +  R
Sbjct: 145 GEEEPVADNKTTEGRAKNRRVEFKLVKR 172


>gi|291619700|ref|YP_003522442.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
 gi|291154730|gb|ADD79314.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
          Length = 595

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           I+   +  +FD   S     +  +L      +       I + GHTD +      + N  
Sbjct: 457 IVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNT---GNPQLNQA 513

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           LSL RA +    +  +G   +    + G+   R   A+      + NRR++I +
Sbjct: 514 LSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 567


>gi|254428815|ref|ZP_05042522.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196194984|gb|EDX89943.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 356

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 17/280 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +   F             I    N       +  DL  +  +   +  +       + +
Sbjct: 90  GVAYAFGDREGFTPFVLAQIGGIYNDVVPDDDDGFDLHANVGLGAVTGPIFDNGLKLRAE 149

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            + + ++   ++ +   +    +  R S   +     T   +               E  
Sbjct: 150 ARYMYDDFDGITGTVSEDEGGFNDWRFSLGLEVPLGQTKTVEVEKIVYETREVEKVVEVA 209

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A      + D   K  +T+ G   D              +L +     N   F+ +S+ 
Sbjct: 210 AADSDGDGIPDNRDKCPNTIQGAKVDGDG----------CLLTNQTITFNNIGFELNSAK 259

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               +  ++ ++ + L   T     I GHTD++     A  N  LS +RA +  Q L+ +
Sbjct: 260 LTATSRPLVDRLVKALKSQTNFDVEIAGHTDST---GSAEYNETLSDERAKAVRQYLIDN 316

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           GV+ +R++   G+       +++     + NRR++  V +
Sbjct: 317 GVAAERLTA-RGYGEVVPVASNETSSGRAMNRRVEFRVSE 355


>gi|124008054|ref|ZP_01692753.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
 gi|123986468|gb|EAY26274.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
          Length = 563

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD +S+    +T+  LQ I ++L    +  + I  HTD         DN  LS  R
Sbjct: 458 SHLLFDYNSAKLDDKTLGYLQTIAQLLKKEPQLKLEISAHTDN---HGTHDDNMNLSKQR 514

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A +  + L+K+GV   R+S   G+   R  + +        NRR+++ V 
Sbjct: 515 AQAVKEFLVKAGVDVKRLSA-KGYGETRPLVPNTTVANRERNRRVELKVL 563


>gi|222823421|ref|YP_002574995.1| outer membrane fibronectin-binding protein [Campylobacter lari
           RM2100]
 gi|222538643|gb|ACM63744.1| outer membrane fibronectin-binding protein [Campylobacter lari
           RM2100]
 gi|244538678|dbj|BAH82830.1| fibronectin-binding protein [Campylobacter lari]
 gi|244538683|dbj|BAH82834.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +       RD  K  +   +      ++       P   +     ++ K + + + K  
Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATNQIEEKPQAKQIDKSC 200

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G + D+I                         F        PE    +Q++G+VL
Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITINPEFAQKIQEVGKVL 246

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             + +  +I  GHTD +        N +LSL+RA +  + L K+GV++++I+   G+   
Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302

Query: 319 RLKIASDP--MNSANRRID 335
           +   ++D     + NRR++
Sbjct: 303 KPIASNDTKEGRAQNRRVE 321


>gi|312130013|ref|YP_003997353.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906559|gb|ADQ17000.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 622

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           +  +   FD  S+   PE+ + L+K+  +L  + +  + I GHTD        + N  LS
Sbjct: 514 ETLDNIFFDTGSAAIRPESEIELKKVVTLLKENPDLKVEISGHTDDV---GNDKANMNLS 570

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           + RA +  + L   G+   R+    G+   + K+ +D       NRRI++ V 
Sbjct: 571 IQRANAVVEYLKGKGIHTQRLVA-KGYGESQPKVKNDSDKNRQLNRRIELKVL 622


>gi|154174678|ref|YP_001407584.1| outer membrane fibronectin-binding protein [Campylobacter curvus
           525.92]
 gi|112803800|gb|EAU01144.1| outer membrane fibronectin-binding protein [Campylobacter curvus
           525.92]
          Length = 337

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 9/124 (7%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           V+ + T    +I + D      F   S    P     ++K+ + +    E   +  GHTD
Sbjct: 215 VVVDETGCEKVIVLRDLDVN--FAFDSYKVGPGYAAEIKKVADFMGEHPEYRVVLAGHTD 272

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           +         N +LS  RA +  +VL   GV + +IS I G+   R    +      + N
Sbjct: 273 SV---GKEAYNQKLSEKRAKAVAEVLEGYGVEKKKISTI-GYGELRPIATNSTKEGRAQN 328

Query: 332 RRID 335
           RR++
Sbjct: 329 RRVE 332


>gi|261417272|ref|YP_003250955.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373728|gb|ACX76473.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 294

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 92/245 (37%), Gaps = 16/245 (6%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           + + T N+++      ++ K       N    +   + +    ++     +     K   
Sbjct: 55  EGYGTLNALETIYADDDESKLIPTFLENCKKYAEIAKLQGETQAIQNHIAENW--EKRAA 112

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---KGVLFET 219
             ++I   +       S +       K+ ++    K+ ++ +  +        + +    
Sbjct: 113 TNRTIEAIQEQIGEARSGKVSDLEAEKQAIKAQKDKLEASKNEAMDKLNALQSQMIQVTK 172

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
              GI++S+ D     +FD   +    + +  L KI  +L+   +   SI G+TD +   
Sbjct: 173 DARGIILSMSD----ILFDVGRATLKTDLMTSLAKIAGILSVYQQFDVSIEGNTDNT--- 225

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +  + L++ G++E R++   G         +        NRR+D+
Sbjct: 226 GSEEFNMTLSQQRAENVMKFLVEQGIAETRLTA-KGLGMTMPIADNSTKEGRQKNRRVDL 284

Query: 337 LVEDR 341
           ++ DR
Sbjct: 285 VITDR 289


>gi|193215633|ref|YP_001996832.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089110|gb|ACF14385.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 398

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE+I  + +I  ++    ++   + GHTD+      A  N  LS  RA S 
Sbjct: 297 FDVGKATLRPESIGPINEIYSLMKAHADIKFSVEGHTDSD---GDASSNQTLSEQRAKSV 353

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L++ G+S DR+    GF   +    +D       NRR++ +
Sbjct: 354 MDELIRMGISADRLK-FKGFGESKPVDTNDTPEGKANNRRVEFV 396


>gi|325105244|ref|YP_004274898.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974092|gb|ADY53076.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 285

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 9/152 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             L   +++ L+  ++   ++ V  +  +  + IS+ D     ++   S          L
Sbjct: 121 DSLNLVLTNNLTRSLSREELRDVDIQVLKGVVYISLADNM---LYKSGSYEISDRADQTL 177

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
            KI +++         I G+TD  P      R+NW LS+ RA S  Q L  K GV   R+
Sbjct: 178 SKIAKIIKDYKNYGVLIEGNTDNVPISQTNIRNNWDLSVLRASSVVQSLQTKYGVDPKRL 237

Query: 310 SKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           +   G   +     +        NRR  I++ 
Sbjct: 238 TAG-GRGEYNPVAPNSTEEGKSKNRRTQIIIT 268


>gi|160899279|ref|YP_001564861.1| hypothetical protein Daci_3845 [Delftia acidovorans SPH-1]
 gi|160364863|gb|ABX36476.1| type IV / VI secretion system protein, DotU family [Delftia
           acidovorans SPH-1]
          Length = 443

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             ++   +     +++ +         +  L  ++   L   + + +   V         
Sbjct: 252 YRLSNSSDDLFAAINEIRFPRTSAAATVATLKPRLRQFLEPEIREGL---VSVRDEADRS 308

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283
            + +   R   +FD ++++  P  + V+ ++   L      + + G+TD  P R      
Sbjct: 309 TVIL---RGDGLFDPAATVVKPRYVQVIHRVAAALDEVPGKVVVNGYTDNLPIRTARFPS 365

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           NW LS +RA +  Q+L  S     R+    G A       ++       NRR++I++ 
Sbjct: 366 NWNLSQERAQAVSQMLGGSLRDRQRLHA-EGRADSDPVAPNNTAEGRALNRRVEIVLL 422


>gi|146307342|ref|YP_001187807.1| hypothetical protein Pmen_2317 [Pseudomonas mendocina ymp]
 gi|145575543|gb|ABP85075.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 453

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F   S+        +L +I E +      
Sbjct: 316 LEDDIRAQRVAVEDAVDRSVVTIRGDE---LFASGSASISDNLQPLLLRIAEAIRQVKGN 372

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW+LS DRA     VL       +R +   G +      ++
Sbjct: 373 VLVTGHSDDRPIATLRYPSNWKLSQDRAQQVMDVLAARSGQPERFTA-EGRSDTEPVASN 431

Query: 325 DPM--NSANRRIDILV 338
           +     + NRR++I V
Sbjct: 432 ESAAGRARNRRVEITV 447


>gi|244538673|dbj|BAH82826.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +       RD  K  +   +      ++       P   +     ++ K + + + K  
Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATNQIEEKPQAKQIDKSC 200

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G + D+I                         F        PE    +Q++G+VL
Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITVNPEFAQKIQEVGKVL 246

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             + +  +I  GHTD +        N +LSL+RA +  + L K+GV++++I+   G+   
Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302

Query: 319 RLKIASDP--MNSANRRID 335
           +   ++D     + NRR++
Sbjct: 303 KPIASNDTKEGRAQNRRVE 321


>gi|315186378|gb|EFU20138.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
          Length = 239

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           ++   +R + L +     +S    +   K V  +    G++I++        F  +S+  
Sbjct: 76  SLPSMERGRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAAD---AFFRSASAEL 132

Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQV 298
             E           L  S E     I I GHTD  P         NW LS  RA +    
Sbjct: 133 NIEAARETLIKLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHF 192

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           L   GV E+   ++ G A       +        NRRIDI++  
Sbjct: 193 LSDYGVDENHF-QVMGLADTVPLADNSTPEGRAYNRRIDIVILS 235



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
                      + + Y D +T+L+ FF++M+     D    + I   F
Sbjct: 2  QKKKKCDEGAPDYMLTYGDMVTLLLTFFVMMFTTATIDGYQLRLILSAF 50


>gi|149774748|gb|ABR28420.1| OmpA/MotB [Delftia tsuruhatensis]
          Length = 219

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSV---GSDAYNQKLSVRRA 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 216


>gi|160900150|ref|YP_001565732.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|151500323|gb|ABS12102.1| OmpA/MotB [Delftia acidovorans]
 gi|160365734|gb|ABX37347.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 219

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSV---GSDAYNQKLSVRRA 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 216


>gi|320529440|ref|ZP_08030528.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
 gi|320138406|gb|EFW30300.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
          Length = 310

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 9/208 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q++  K      +               +    +   P +S          K  ++L++ 
Sbjct: 41  QTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEA 100

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                  +   ++   V  E +  G++I + ++    +FD  S+    +   ++  I  +
Sbjct: 101 QEKLEQYIKEHDLQDQVSTELSEDGLMIRLKEK---ALFDSGSAALQGQAEQIVPVIAAL 157

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS--GVSEDRISKISGF 315
           L    E ++I GHTD  P        NW LS  RA S  + LM +   ++  R S + G+
Sbjct: 158 LTSLPERVTISGHTDNVPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSAL-GY 216

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
           + +R   ++D     + NRR+++ +   
Sbjct: 217 SEYRPIASNDTEEGRAQNRRVEVFIARS 244



 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 50/149 (33%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK A         +W + Y+D MT+L+A F+ ++ ++ TD    +A+ Q F      
Sbjct: 1   MARKKHAKPHEEEAGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +              S +  D     ++ +N    +     ++   +    +     
Sbjct: 61  GGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTE 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            S+     +       + G    +    +
Sbjct: 121 LSEDGLMIRLKEKALFDSGSAALQGQAEQ 149


>gi|325954634|ref|YP_004238294.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437252|gb|ADX67716.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 234

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                + ++ G     T  GI + + +  +   FD +S     +    L K+ +V     
Sbjct: 86  QAEKIEQVLPGAEVVRTDEGINLILNENSS-VTFDYNSENLTSKAKNSLDKLIQVFKEYP 144

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD          N  LS  RA S    L+  G+S  R++   G        
Sbjct: 145 DTNLLIVGHTDNV---GSQNFNLPLSEKRAKSVVNYLVSKGISSSRLTS-KGVGLSEPIA 200

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            +      + NRR++I +   +
Sbjct: 201 DNSTAAGRAQNRRVEIAITANE 222


>gi|322436615|ref|YP_004218827.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321164342|gb|ADW70047.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 531

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 11/278 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                  ++L  AS     +    +                +     K  +  Q+     
Sbjct: 249 DTMASAKQDLKNASDIDSGKHRDVKMEITYARQAVQRAEDARVDTLRKKAAERQRNAEIA 308

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
             +     + SQ          + S       +    +  + +     L   ++ K L  
Sbjct: 309 KNDAQQQAAQSQAQAEAARLAEQKSALDAQKSQLAAQQAQLAQANADALAAQARNKELEA 368

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            ++    +   + +  +   +   + + +    T  G+++++ D     +FD        
Sbjct: 369 NQRADAANKRAESAEQMRERLRAQLNEVLQTTETSRGVIVNLSD----ALFDTGKYTLKT 424

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            T V L ++  +L       + + G+TD          N RLS +RA +    ++K GV 
Sbjct: 425 NTQVSLARVAGILQSYPGLKVQVEGYTD---IVGSDALNQRLSENRANTTRDFMVKQGVP 481

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            D IS   G+        +      + NRR++++V   
Sbjct: 482 TDSISAA-GYGKADPVADNGTAAGRAQNRRVELVVSGD 518


>gi|302035624|ref|YP_003795946.1| hypothetical protein NIDE0237 [Candidatus Nitrospira defluvii]
 gi|300603688|emb|CBK40019.1| exported protein of unknown function [Candidatus Nitrospira
           defluvii]
          Length = 513

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTD 273
             E       I++ D  +   +D       P  + +L+++ E L  +     + + GH+D
Sbjct: 300 RVERAHGSTRINLDDLADQLEYDSGEVKVKPAGVPILEQLAEYLRTAAGSQQVRVEGHSD 359

Query: 274 ASPFR----NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
                     +   NW LS  RA    + L++  G+   ++S + G+   R    +    
Sbjct: 360 NMEIGPSLKGVFPTNWELSKARAAEIVRYLIEKGGMDSAKLSAV-GYGASRPVAGNGTEE 418

Query: 329 SA--NRRIDILVEDRQ 342
               NRRI+++++  +
Sbjct: 419 GRKKNRRIEVVLDSPE 434


>gi|304438419|ref|ZP_07398359.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368502|gb|EFM22187.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 306

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 9/210 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           SQ       +L +      ++   +                 +          K   DL+
Sbjct: 40  SQTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSMSSATVTTGADTADAAYMKENNDLS 99

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +     +  +N+   V  E    G++I + ++    +F   S+    +   ++  I 
Sbjct: 100 EAKAKLDQYIQENNLQDQVSTELNEEGLMIRLKER---ALFASGSAALQGDAERIVPVIA 156

Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ--VLMKSGVSEDRISKIS 313
            VL+   E ++I GHTD  P        NW LS  RA S  +  + ++  ++  R S + 
Sbjct: 157 GVLSSLPERVTISGHTDNVPIATAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSAL- 215

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G++ +R   ++D     + NRR+++ +   
Sbjct: 216 GYSEYRPIASNDTEEGRAQNRRVEVFIARS 245



 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 48/153 (31%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +KK A         +W + Y+D MT+L+A F+ ++ ++ TD    +A+ Q F      
Sbjct: 1   MARKKHAKPHEEEAGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              +             ++      + D    K + DL        +  Q         +
Sbjct: 61  GGPSFFSGMGPSTSMSSATVTTGADTADAAYMKENNDLSEAKAKLDQYIQENNLQDQVST 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
              +         R            D E+ + 
Sbjct: 121 ELNEEGLMIRLKERALFASGSAALQGDAERIVP 153


>gi|239813231|ref|YP_002942141.1| hypothetical protein Vapar_0212 [Variovorax paradoxus S110]
 gi|239799808|gb|ACS16875.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus S110]
          Length = 460

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 87/296 (29%), Gaps = 22/296 (7%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           FF ++      +      + +               + D       + + ++   I +  
Sbjct: 167 FFQLL-SRLVQNPQQHLQLIELIYFCLAMGFEGRFRVIDNGRTQLETLKQRLLQIIRQTR 225

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            + +V L     +     +R  N                 L            +   + +
Sbjct: 226 GEIAVPLSPHWQDASAPVRRTRN----WVPLWAVGAVAAVLLVLVFGVLTFSLAGRSDGA 281

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
                   LP   +   +A   + RLQ   +         V D   + V+          
Sbjct: 282 FAAVNAVRLPQTQRAVAVAPAPQPRLQRFLEPEIRDGLLTVRDEADRSVVVLR------- 334

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
                    +F   S   L     VL ++ + L      + + G +D  P R+     NW
Sbjct: 335 ------GDGLFASGSDRVLDRYAPVLARVADALNSVEGNVLVSGFSDDQPIRSVRFPSNW 388

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +LS  RA +  +++       +R+ +  G       + +D     + NRR+++ + 
Sbjct: 389 QLSQARADAVKKMIATRVTRPERL-RAEGRGDADPLVPNDSPANRARNRRVEVTLL 443


>gi|238783322|ref|ZP_04627346.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
           43970]
 gi|238715745|gb|EEQ07733.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
           43970]
          Length = 403

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 210 NIVKGVLFETTRTGILISIIDQ------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           N+   +  E     +++   D+      R   +FD       P    V+  IG  L   +
Sbjct: 252 NLANFLQEEIASGMVVVRTDDKQSVIALRGDGLFDSGMITIRPAYNQVINHIGNALNGVS 311

Query: 264 EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             I + G++D  P  ++    N  LSL RA +    L K  +   +  K  G        
Sbjct: 312 GKIMVTGYSDNVPIRKSTFTSNSALSLARANAVGSQLQKY-LDSAQRVKTEGRGEANPVA 370

Query: 323 ASDPM--NSANRRIDILVE 339
            +D     + NRR++I + 
Sbjct: 371 PNDSKKDRALNRRVEITLL 389


>gi|226951234|ref|ZP_03821698.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
 gi|226838028|gb|EEH70411.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
          Length = 213

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  FD + S   P     L K+ +VL   +   I + G+TD +        N  LS  
Sbjct: 104 PGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILVTGYTDNT---GNDSINIPLSQA 160

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S    L   G++ +RI    G+        +        NRR++I +  +Q
Sbjct: 161 RAQSVKNYLAGKGIASNRIDA-QGYGSSNPIADNSTAAGREQNRRVEISIYAKQ 213


>gi|110638537|ref|YP_678746.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281218|gb|ABG59404.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 510

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%)

Query: 212 VKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SI 268
            + +        + I +      N   F+ S    LPE+   L K+ ++L  + ++   I
Sbjct: 380 NEYIEITRDYYLVPIEVGQSIKLNHIYFETSKYDLLPESYYELDKVVKLLRENPKMKIEI 439

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326
            GHTD       A  N  LS +RA S    ++  G++ DRI+   GF   +  + +D   
Sbjct: 440 EGHTDNQ---GNADKNMILSQNRAKSVMDYIISKGITADRITS-KGFGITKPMVDNDTPE 495

Query: 327 MNSANRRIDILVEDR 341
               NRR++  +  +
Sbjct: 496 NRQLNRRVEFTILQK 510


>gi|332308557|ref|YP_004436408.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175886|gb|AEE25140.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 215

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +   +         +    GV        + + +     +  F   ++        VL+
Sbjct: 69  AIGNYMDRQEEEFREELADSGVEVYREGDVLRLYM---PGSITFSSGNASVDSSFFPVLK 125

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +  V+    +    + GHTD +        N RLS  RA S    L+++GV   R+S +
Sbjct: 126 DVALVINKYEKTTLMVEGHTDNT---GADDMNQRLSEARANSVKNYLVQNGVDNRRVSTL 182

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338
            G   +     +        NRR+++ +
Sbjct: 183 -GMGEYTPIADNTTQAGRQKNRRVELKI 209


>gi|328948405|ref|YP_004365742.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
 gi|328448729|gb|AEB14445.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
          Length = 240

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 12/160 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
           ++ + L   +   +S    +     +   +   G++IS+        F++ S+     E 
Sbjct: 82  EKGRALGPAMKKAISSFAPEVKSNKITITSDERGLVISLASDT---FFEEGSAELNIEEA 138

Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSG 303
              L  + +  A          I GHTD  P         NW  S  RA +    L   G
Sbjct: 139 RGTLINLAKFFASPEVAGRRWRIEGHTDNRPVPASSIYPSNWEFSAARAANVLHYLADFG 198

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           V E +   I+G+A  R K+++D       NRR+D++V D 
Sbjct: 199 VDEQQF-SIAGYADTRPKLSNDTAEGRAYNRRVDVIVLDD 237



 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +      +W   Y D +T+++ FF++++  + +D     A++        N    
Sbjct: 3   KREKKEPAKPSTAWMGTYGDMITLMLCFFVMLYDPSESDAVQMAALQASL----SNNNPG 58

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                   +     +      SI++         K  S+   +    
Sbjct: 59  GGISVSPGSLANLGNVVSSLPSIEKGRALGPAMKKAISSFAPEVKSN 105


>gi|257457774|ref|ZP_05622935.1| OmpA family protein [Treponema vincentii ATCC 35580]
 gi|257444824|gb|EEV19906.1| OmpA family protein [Treponema vincentii ATCC 35580]
          Length = 434

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +KI   L   + D  +     E T  GI IS+        F+  S+  LP     L+KI
Sbjct: 293 KEKIVEILDKNIRDMGIPNTTVERTDEGITISL----ENIQFEPDSARLLPAEKEKLKKI 348

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           G++LA   +  + I GHT        A D   LS  RA +    L++ GV E       G
Sbjct: 349 GDILASYPDYELLISGHT---ALAGRAEDRQVLSEQRASAVANYLIELGVREKHHIFTRG 405

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341
           F   +    +      + NRR++I V ++
Sbjct: 406 FGAEKPIAPNTTEANKARNRRVEITVLEK 434


>gi|261380477|ref|ZP_05985050.1| OmpA family protein [Neisseria subflava NJ9703]
 gi|284796724|gb|EFC52071.1| OmpA family protein [Neisseria subflava NJ9703]
          Length = 226

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        +  E     I + + +      F   S+         L    +
Sbjct: 76  YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGHAQSALSAAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA S    L   GVS  R+S   G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVATFLQSRGVSSTRLSTF-GYG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
             +   ++      + NRR++IL+   Q
Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216


>gi|171057646|ref|YP_001789995.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170775091|gb|ACB33230.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 243

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD    +  P+    L  +   +      + I  GHTD+         N +L ++RA
Sbjct: 132 DAFFDTGKFVLKPDAASKLDDLVSKVKDINLEVIIAVGHTDSD---GSDAYNQKLGVNRA 188

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            +  + L+  GV ++R+    G    +    +      + NRR++I V   +
Sbjct: 189 EAVKKYLVSKGVEQNRVYT-EGKGEKQPVADNGTKEGKAKNRRVEIEVVGTR 239


>gi|146281506|ref|YP_001171659.1| OmpA family protein [Pseudomonas stutzeri A1501]
 gi|145569711|gb|ABP78817.1| OmpA family protein [Pseudomonas stutzeri A1501]
 gi|327479683|gb|AEA82993.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
          Length = 217

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
                F  +S+         L  + +V    +   + I GHTD++      + N  LS  
Sbjct: 109 PGNITFASNSADISSSFYPTLNSLVQVFKEFNKNGVDIVGHTDST---GSLQLNQDLSNR 165

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA S    L+ +GV+  RIS   G    +   ++D     + NRR++I + 
Sbjct: 166 RAQSVASYLIANGVAPARISSY-GAGPSQPIASNDTAAGRAQNRRVEINLR 215


>gi|330503720|ref|YP_004380589.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328918006|gb|AEB58837.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 262

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
               + D +   T  +   Q        L  ++ +         D   G+ L    D + 
Sbjct: 26  TPTGAADARHRLTQLQNDPQLASRIPVSLKAAETAVLAAEQPRTDEVVGQHLVVMADRKV 85

Query: 166 SINKEEN-YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTG 223
            I +           + ++   +   RL    ++        V     + G+  E T  G
Sbjct: 86  EIARARALERFYEDQRRQLGEQRESARLDSRTREADQAQQRNVDLQRQIDGLNAEETERG 145

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           +L+++ D     +F    +         L  + + L    E   +I GHTD         
Sbjct: 146 LLVTLGD----LLFASGRAELNGNANHNLATLTDFLNRHPERTVTIEGHTDNV---GSES 198

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            N+ LS  RA S    L   G++  R+   SG         +D       NRR++I++ +
Sbjct: 199 ANFGLSQRRADSVKSHLQSQGIAASRLLA-SGMGEGSPVAGNDSAEGRQLNRRVEIIISN 257


>gi|254457130|ref|ZP_05070558.1| OmpA/MotB [Campylobacterales bacterium GD 1]
 gi|207085922|gb|EDZ63206.1| OmpA/MotB [Campylobacterales bacterium GD 1]
          Length = 407

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S +    +  +++K  + L + +     I G+TD+   +  A  N +LS  RA + 
Sbjct: 304 FENNSDVVNTSSYDIIEKYADFLNNYSSYSAKIIGYTDS---KGSANYNQKLSEKRANAI 360

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             +L++ GV  DR+S + G         +      + NRRI+  +  +
Sbjct: 361 KSMLLEKGVPADRLSSV-GMGESNPVADNSTKEGRAQNRRIEAELTKK 407


>gi|163856192|ref|YP_001630490.1| outer membrane protein A precursor [Bordetella petrii DSM 12804]
 gi|163259920|emb|CAP42221.1| outer membrane protein A precursor [Bordetella petrii]
          Length = 193

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+       + N  LS  RA S
Sbjct: 87  FFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHTDSI---GTEKYNQGLSERRAAS 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  GV  +RI    G    +   ++      + NRR++I V   +
Sbjct: 144 VKSYLVSKGVDPNRIYT-EGKGELQPVASNKTREGRAQNRRVEIEVVGSR 192


>gi|162453404|ref|YP_001615771.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161163986|emb|CAN95291.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 263

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 12/234 (5%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G + Q+ + Q  + N     + ++    +  L    ++ ++L K    + +   + +  L
Sbjct: 21  GHSEQEWKSQLDKYNQLQNRSQKREAELEKELADAKQRVEELEKKLADQGADISKMSSTL 80

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K       R K+L+ +  +    L   + + +  G+  +  R  ++IS+       
Sbjct: 81  EDREKALAEYKARAKQLEAIQARFD-LLRKKLEELVKLGLEVQVRRNRMVISL---PGDV 136

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH----STEVISIRGHTDASPFR-NIARDNWRLSLD 290
           +FD        +   +L+KI +V+            + GHTD+ P++    +DNW LSL 
Sbjct: 137 LFDSGKDTLSKDGQQILKKISDVIRGDKSLVDRDYQVAGHTDSQPYKSGPFQDNWGLSLM 196

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           RA +    L+ K G    R    +GFA      +++       NRR D++V   
Sbjct: 197 RARAVLLFLIGKEGQLPTRHWSAAGFADTDPIASNNTPAGKQKNRRCDLIVLPD 250


>gi|94500736|ref|ZP_01307265.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
 gi|94427058|gb|EAT12039.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
          Length = 226

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 15/186 (8%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S++      +  L +     +  +K +   +         +   N+ + V     + G+ 
Sbjct: 44  SVSDLNQGKIESLKEGLAGVLTGEKVVTPFSDIKKELDQIINQHNMQENVSVVIDKKGVK 103

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRN-IA 281
           +   D     ++D  S+   P+ + VL ++ +V+  S        + GHTD  P      
Sbjct: 104 VEFSD---FSLYDSGSAAIRPQALPVLNEVTKVIESSVHKTHLVEVEGHTDDVPISTEKF 160

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334
             NW LS  RA +  + L+  GV ++++   SG+A  R K A            + NRR+
Sbjct: 161 PSNWELSAARASNVVKYLLGKGVKKEQLKA-SGYADSRPKSAPIEGQVMDAQQRAENRRV 219

Query: 335 DILVED 340
            I V  
Sbjct: 220 VIYVRR 225



 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
          ++       +  G W + YAD +T+L+AFF+++  ++  +    +++++  
Sbjct: 11 RRRRQTFDADGEG-WIVTYADAITLLLAFFVMILSVSDLNQGKIESLKEGL 60


>gi|295691294|ref|YP_003594987.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295433197|gb|ADG12369.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 224

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 11/147 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +         GV+       I++ +        FD   S   P  + VL  + 
Sbjct: 81  NYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVT---FDVDRSDIQPRFVRVLDDVA 137

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
             L    +    + GH D+         N  LS  RA +    L   G V  DR+  ++G
Sbjct: 138 RTLNAYPQTTIDVVGHADS---SGADEYNQVLSERRASAVAGYLTSQGRVLPDRVF-VAG 193

Query: 315 FAHHRLKIASDPM--NSANRRIDILVE 339
               +    +      + NRR++I++ 
Sbjct: 194 MGERQPIADNSTAAGRAENRRVEIVLR 220


>gi|146282858|ref|YP_001173011.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
 gi|145571063|gb|ABP80169.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
          Length = 244

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 7/226 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
              ++++ +        +                   G+    +     +  +       
Sbjct: 17  EPQREEEQEAWLITYLDMLTLLLVMLVIMLALAGKGDGEQNDPAASAMLAAGELGVALPA 76

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P +    +A                ++       +   +        I   I    +  +
Sbjct: 77  PAAPIPSIAPVPTPAADAQPDDPQESMPTPPGMALGDDIQVIVNEGSISFRI---SSEIL 133

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F    +      + V+ ++   LA +   I + GHTD  P +      NW LS  RA S 
Sbjct: 134 FGSGRAELEDAGLEVIDRLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSV 193

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            + L  +G+   R+S  +G+A  R    +        NRR++++++
Sbjct: 194 VRYLQLAGIEATRLSA-TGYADTRPLADNADERGRASNRRVELVMQ 238


>gi|149276320|ref|ZP_01882464.1| OmpA/MotB [Pedobacter sp. BAL39]
 gi|149232840|gb|EDM38215.1| OmpA/MotB [Pedobacter sp. BAL39]
          Length = 448

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 90/321 (28%), Gaps = 38/321 (11%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL------SIDEH 105
           + I     + KK I   +   G   M++   +  E   P  ++             +   
Sbjct: 131 FTIANLSLNQKKNILSPYATIGAGYMSSGATLRTEAGAPAIANATNQGFHENWFVPVGAG 190

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
                 +           + + +N       +       ++    +   K   +  +   
Sbjct: 191 FKLGISNGVNIDLGYNVNFVKGKNFDGVSGAANDRFSYAHAGVEIALGKKGAPQLQNFSP 250

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL------------------SGLV 207
                E          + L+ + + RL+D  +                        +   
Sbjct: 251 IAALREQSAAESAELRRALSTEEQNRLRDQEQYAKDMGDDDGDGVANKFDKCPGTPANTQ 310

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLPETIVVLQKIGEVL 259
            D     +          + + +     +        FD   +     +   L ++  +L
Sbjct: 311 VDGAGCPLKTPRPIVTEKVIVTEADRRVVDEAIKNLEFDLGKATIRSTSFNTLNRVAALL 370

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 + + GHTD +        N RLS +RA S    L+  GV+  R+   +G+  ++
Sbjct: 371 VEKNFSLKLAGHTDNT---GSMALNLRLSKERAESVKAYLVSQGVNASRVEA-TGYGPNQ 426

Query: 320 LKIASDPMNSA--NRRIDILV 338
               +        NRR++  +
Sbjct: 427 PIATNKTAAGRQQNRRVEFTL 447


>gi|121594804|ref|YP_986700.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
 gi|222110597|ref|YP_002552861.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
 gi|120606884|gb|ABM42624.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
 gi|221730041|gb|ACM32861.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
          Length = 218

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 216


>gi|238790227|ref|ZP_04634002.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
           33641]
 gi|238721670|gb|EEQ13335.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
           33641]
          Length = 575

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   SI    +  VL      +       I + GHTD       ++ N  LSL 
Sbjct: 440 DSLSLFDVGQSILKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDSQSNQILSLK 496

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    +  +G   +    + G+   R   ++D       NRR++I +
Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGESRPLKSNDTEAGRALNRRVEISL 546


>gi|47091738|ref|ZP_00229534.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
 gi|47020057|gb|EAL10794.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
          Length = 293

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 106/341 (31%), Gaps = 69/341 (20%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              + +E  + + + K+       +   +W I Y+D +T+L+A F+V++  ++ D    +
Sbjct: 6   EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 65

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +   F    +     ++    ++  P+  + N +  +++E   K     +  +      
Sbjct: 66  QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAA 125

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             + +N     +  +Q +     +  +    K   K +D    I   ++      S E  
Sbjct: 126 LLKKQNEEKIEAFKKQIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELT 182

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +   +                                            +F +    
Sbjct: 183 AGKREIAK----------------------------------------EIGELFAQGKGT 202

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS 302
                                   + GHTD  P        NW LS+ RA +  + +++ 
Sbjct: 203 ME--------------------GIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQE 242

Query: 303 G--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
              V+    S   G+   R    +D       NRR++I+V 
Sbjct: 243 NSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 282


>gi|281426147|ref|ZP_06257060.1| OmpA family protein [Prevotella oris F0302]
 gi|299141901|ref|ZP_07035036.1| OmpA family protein [Prevotella oris C735]
 gi|281399723|gb|EFB30554.1| OmpA family protein [Prevotella oris F0302]
 gi|298576752|gb|EFI48623.1| OmpA family protein [Prevotella oris C735]
          Length = 284

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 14/232 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           Q  + +   +     S  +Q    K ++            + +       +    +   +
Sbjct: 41  QNTKEELAASKARVASLEEQLAQQKKNVAALQNALDKSLVNANANNINISKLVDQINESN 100

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++  
Sbjct: 101 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSREEMKEVDIKVLKGVVYISLADNM---LYKS 157

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRA 292
            S          L+KI +++    +    I G+TD  P    +      R+NW LS  RA
Sbjct: 158 GSYEINDRAEETLRKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNIRNNWDLSALRA 217

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            S  Q L    GV+  R++   G   +    ++D       NRR  I++  +
Sbjct: 218 SSVVQYLQDRFGVAPKRLTAG-GRGEYNPVASNDTELGKQRNRRTQIIITPK 268


>gi|238783359|ref|ZP_04627383.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
           43970]
 gi|238715782|gb|EEQ07770.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
           43970]
          Length = 574

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S     +  VL      +       I + GHTD        + N  LSL 
Sbjct: 439 DSLSLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQTLSLK 495

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S    +  +G   +    + G+   R   ++D     +ANRR++I +
Sbjct: 496 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLQSNDTEAGRAANRRVEISL 545


>gi|120554886|ref|YP_959237.1| flagellar motor protein MotD [Marinobacter aquaeolei VT8]
 gi|120324735|gb|ABM19050.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 260

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 6/184 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTLSGL 206
                          +     + E+   PP+++      +  + R + L    +      
Sbjct: 59  APQRSLQPVTVGGQPVRAPQQQHEDVIPPPVTEAPRNPELDAEGRTEALRTMANQLAMEF 118

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
                   V  ET+   I +++    N+ +F    + P  ++  V++KI  VL +    +
Sbjct: 119 DELINQGVVSLETSSEWIELNL---PNSMLFGSGDAEPHYDSFEVIEKIASVLRNRDNAV 175

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            + G TD  P R      NW LS  RA +  ++LM  G+  +R++ + G+  ++    +D
Sbjct: 176 KVEGFTDNQPIRTSRFPSNWELSTARAAAVARMLMMEGIEPERLAAV-GYGQYQPVARND 234

Query: 326 PMNS 329
               
Sbjct: 235 TEEG 238



 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 54/121 (44%), Gaps = 1/121 (0%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++++    D  +N   W I YADF+T+L AFF+VM+ +++ ++   K + + F       
Sbjct: 1   MRRRRPPQDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETFTGVFNAP 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             + + +     P     Q   D  I   +T+   + ++ +  + +  + + N +    +
Sbjct: 61  QRSLQPVTVGGQPVRAPQQQHED-VIPPPVTEAPRNPELDAEGRTEALRTMANQLAMEFD 119

Query: 137 S 137
            
Sbjct: 120 E 120


>gi|115375600|ref|ZP_01462857.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|310823151|ref|YP_003955509.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115367376|gb|EAU66354.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396223|gb|ADO73682.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  + +    E    L  + + +  S+  I+++GH D          N +LS  RA +  
Sbjct: 150 FGFNEASLSSEAQSRLSALADCIKASSGRITLQGHADER---GTEEYNLQLSNSRASAVK 206

Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           + L   GV  +R++ + G+   R     + +   + NRR++ 
Sbjct: 207 RYLTTLGVPANRLATV-GYGETRPLNSASDEEAWAQNRRVEF 247


>gi|114569157|ref|YP_755837.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114339619|gb|ABI64899.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 227

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + +       GV        + + +        F  +S+    +   +L  + 
Sbjct: 84  NYMDRQETAMREALSDTGVGVRREGNDLRLIM---PGDVTFATNSADIQGQFYGILSDVS 140

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL       + + GH D+      A  N +LS  RA S    L+  GV  DR   I+G 
Sbjct: 141 TVLNRYPATYVDVVGHADSV---GAADYNQQLSERRALSVGNYLIAQGVLRDRFY-IAGM 196

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++IL+ 
Sbjct: 197 GERSPIASNETAAGRQQNRRVEILIR 222


>gi|254516643|ref|ZP_05128702.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
 gi|219675066|gb|EED31433.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
          Length = 255

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 7/128 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           V  +     +   ++   +   F   S+    ++   L     V+   +   + + G+TD
Sbjct: 132 VKVDMKGCPVKDEVVLTIDRLGFAFDSAALDAKSRSALDAAVAVIKSHSSVKMDVVGYTD 191

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           +         N +LS  RA +A   L+  GV+  ++ + +G        ++D       N
Sbjct: 192 S---SGPEEYNQKLSERRAQAAVDYLVSQGVAAGQL-RATGRGEANPVASNDSRDGRERN 247

Query: 332 RRIDILVE 339
           RR++++V 
Sbjct: 248 RRVELVVR 255


>gi|124010248|ref|ZP_01694902.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
 gi|123983684|gb|EAY24121.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
          Length = 286

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 9/194 (4%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               L K  +  +   + +   L               R  +L K +   +   + +   
Sbjct: 86  TTTQLRKQLNERQKELQRKEQLLANREAVVQKLKAAIDRKDNLLKNLLGKVRNALKNFNP 145

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             +   +    I +S+ ++    +F    +    +    L K+ EVL  + +  I I GH
Sbjct: 146 DELTVTSKNGKIYVSLAEKL---LFKSGRTDVDRKGKKALGKLAEVLNKNQDIDIQIEGH 202

Query: 272 TDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA--SDPM 327
           TD+ P      RDNW LS+ RA S  ++L+K   V    ++   G        +  +   
Sbjct: 203 TDSIPITTARFRDNWDLSVLRATSIVRILVKDYEVDPKTLTPA-GRGETTPVASNKNKEG 261

Query: 328 NSANRRIDILVEDR 341
            + NRRI+I++  +
Sbjct: 262 RAKNRRIEIVLSPK 275


>gi|89092082|ref|ZP_01165037.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
 gi|89083817|gb|EAR63034.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
          Length = 218

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L  +    GV  E     I + +        F  +S    P    VL  + +
Sbjct: 77  YMDQQEALLRQELEGTGVRVERIGDSIRLIM---PGNITFALNSDQIAPSFYSVLDSVAK 133

Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL       +++ G TD++        N +LS  RA      L+ SG+S  RI+   G+ 
Sbjct: 134 VLVKFDQTELNVDGFTDST---GSFEYNQQLSERRAARVGDYLVSSGISRLRINA-KGYG 189

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                  +      + NRR++I +   +
Sbjct: 190 ERYPIADNKTAAGRAQNRRVEINISGTR 217


>gi|26990890|ref|NP_746315.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|148546893|ref|YP_001266995.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|24985904|gb|AAN69779.1|AE016614_5 OmpA family protein [Pseudomonas putida KT2440]
 gi|148510951|gb|ABQ77811.1| OmpA/MotB domain protein [Pseudomonas putida F1]
 gi|313497955|gb|ADR59321.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 270

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 10/239 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
           + +V  +    +         + I    +  ++E   + +   S+       S    +  
Sbjct: 33  EATVAFQGVKDDSDVLRSAPRDVIRAGESLARAERLSSYIGTGSDVRHYAYLSQRYSEIA 92

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            +     L    + K+   +++ +L     K++S              L        L+ 
Sbjct: 93  REHAKLALNQERQAKLDLERQRLQLALREAKLASVQQQGKWVESQIAALASEQADRGLVM 152

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286
                   +FD  S+         + K+ + L  +   V+ I G+TD++       +N +
Sbjct: 153 ---TLGDVLFDTGSADLKNSASRTVLKLVQFLQLNPRRVVRIEGYTDST---GAGEENLK 206

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           LS DRA S   +L+  G+ E R+ ++ G+       A+      + NRR++I+  D +G
Sbjct: 207 LSRDRAQSVADMLVDLGIDEKRL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264


>gi|222086409|ref|YP_002544943.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
 gi|221723857|gb|ACM27013.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
          Length = 222

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    S L A     GV        I++++        FD       PE    L  + 
Sbjct: 78  NYMDQQESELRAQLQGTGVSVTRVGDRIILNMPSAIT---FDIDRDEIKPEFFATLNSVA 134

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSERRAGSVASYLGSQGIDQRRVSAV-GF 190

Query: 316 AHHRLKIA--SDPMNSANRRIDILV 338
              +   +  ++   + NRR++I +
Sbjct: 191 GPTQPVASNANESGRAQNRRVEIQI 215


>gi|330812625|ref|YP_004357087.1| hypothetical protein PSEBR_a5553 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380733|gb|AEA72083.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 436

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
           S++  R   +F   S+    +   ++ +I + +      + + GH+D  P        NW
Sbjct: 317 SVVTIRGDELFASGSASIKDDFQPLMLRIADAVRKVKGQVLVTGHSDNRPIATLRFPSNW 376

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            LS  RA S  Q+L       +R S   G +      ++      + NRR++I V  
Sbjct: 377 ALSEARAQSVLQILSAKTGQPERFSA-EGRSDTEPLASNATTEGRARNRRVEITVLA 432


>gi|313200972|ref|YP_004039630.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|312440288|gb|ADQ84394.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 444

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  E      ++     +   MF    ++  P T  +++K+G  +A     
Sbjct: 299 LATEIAQGKVRVEEDSAHAIVVF---KGDGMFSGGLAMLSPATREIVEKVGRAVADVQGR 355

Query: 266 ISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           + + GH+D           ++N  LS  RA +  QV+ + GV   RI +++G    +   
Sbjct: 356 VRVVGHSDNQKLSGKNPEFKNNQILSEKRAQAVVQVMTEMGVDNSRI-EVAGMGDTQPIT 414

Query: 323 ASDPM--NSANRRIDILV 338
           ++      + NRR++I V
Sbjct: 415 SNSTASGRAKNRRVEIEV 432


>gi|288801555|ref|ZP_06406997.1| OmpA family protein [Prevotella melaninogenica D18]
 gi|302345028|ref|YP_003813381.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|288335597|gb|EFC74030.1| OmpA family protein [Prevotella melaninogenica D18]
 gi|302149794|gb|ADK96056.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 286

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q    + S         +  ++ +       +    +   ++     ++ K +   L 
Sbjct: 58  EDQLAQARESAAALQGSLDNSLRNANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +++ L+  ++   +K V  +  +  + IS+ D     ++   S          L KI 
Sbjct: 118 MVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEVNDRAEQTLSKIA 174

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           +++    +    I G+TD  P           R+NW LS  RA S  Q L    GV+  R
Sbjct: 175 KIITDYKDYDVLIEGNTDNVPINTTTDKMKNIRNNWDLSCLRAASVAQYLQDRFGVNPKR 234

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           ++   G   +     +D       NRR  I++  +
Sbjct: 235 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 268


>gi|197116453|ref|YP_002136880.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
 gi|197085813|gb|ACH37084.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
          Length = 333

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S   P+    L+ + + L        +I GHTD+         N +LS  RA S 
Sbjct: 229 FDTNKSDIKPQYHDELKALADFLKEFPNATGTIEGHTDSV---GDKAANMKLSQRRADSV 285

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
            + L+   G++ +R+  + G+   +    +        NRRI+
Sbjct: 286 RKYLVDKFGIAPERVKAV-GYGPTKPAADNKTAAGKQKNRRIE 327


>gi|38327415|gb|AAR17735.1| motility protein B [Bdellovibrio bacteriovorus]
          Length = 248

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 7/152 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++   +  +L   +     K  + +     + + I     +  F + S+   PE +  L 
Sbjct: 94  EVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIA-LAASTFFQEGSAKLKPEALKXLD 152

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311
              +VL    + I I GHTD  P        NW L+  RA +  + L+K   +   R   
Sbjct: 153 -KVDVLKTHKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVS 211

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +S +   +  + +D     + NRRI+I +   
Sbjct: 212 LS-YGDQKPVVPNDSDEHRAMNRRIEIFIVTD 242



 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 2/144 (1%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KK    ++  N+   W + YADF+T+L AFF+VM+  + ++++ +K  E         
Sbjct: 1   MAKKHRKHEEHENH-ERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHL 59

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +                        +  +      V+  +   +  K     +  +    
Sbjct: 60  VGRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVEDYV-ERSLDKSMDSAQKKLAIQD 118

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCK 159
               +   + +L   +   +   K
Sbjct: 119 VYHDAVGVRIALAASTFFQEGSAK 142


>gi|149193957|ref|ZP_01871055.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
 gi|149135910|gb|EDM24388.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
          Length = 256

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 9/218 (4%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L           S     +  + +         +       +     +K   +
Sbjct: 20  TFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLQGALSVLEGGTQTEVSRERIQKATPI 79

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL- 245
            + +       ++   ++              T + G     I       F   S+    
Sbjct: 80  VKNEETAQTVNRLQQAITEFKEMTQAGKGNAITLQEGEEGFFIRLPADITFAPGSAEITN 139

Query: 246 PETIVVLQKIGEVLAHS---TEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300
            ++++ L++I  ++         I IRG+TD  P    +  RDNW LS  RA S  ++L+
Sbjct: 140 QDSLLFLKRIAIIIKEYLPKNIDIQIRGYTDNLPPPKNSPYRDNWDLSAARALSVLKILI 199

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           K GV   ++S  + +  +    ++        NRR++I
Sbjct: 200 KDGVDPKQLSAAA-YGEYHPIASNLTPEGRDKNRRVEI 236



 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 34/106 (32%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P  +  W   + D M++L+ FF+++  ++  D    K            L  
Sbjct: 3   KKKCKCECPECMPEWLATFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLQGALSVLEG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
            ++     +   + +   K + +            +     Q  + 
Sbjct: 63  GTQTEVSRERIQKATPIVKNEETAQTVNRLQQAITEFKEMTQAGKG 108


>gi|313206839|ref|YP_004046016.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312446155|gb|ADQ82510.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
 gi|315023913|gb|EFT36915.1| putative flagellar motor protein MotB [Riemerella anatipestifer
           RA-YM]
          Length = 278

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +    R   L   +S+ L   + +   + V  +  +  ++IS+ D+    ++     
Sbjct: 103 KQLISTNARNDSLNLALSNKLKRSLDNVADQDVQVKVLKGVVMISLSDKM---LYRSGDY 159

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
             LP    VL K+ +V+    +    I G+TD  P  + +  +DNW LS  RA S  +VL
Sbjct: 160 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNVPLNSASLPKDNWDLSALRATSVAKVL 219

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               GV   RI+   G + +  K  +      + NRR +I++  +
Sbjct: 220 QNQFGVDPSRITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 263


>gi|312890939|ref|ZP_07750468.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311296722|gb|EFQ73862.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 252

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           I+   +  +FD   +   P     + ++   L  + E    I GHTD +     A  N  
Sbjct: 127 IVKFDSGILFDIDKTALKPVAKTNIDQLSASLKKNPETNILIVGHTDNT---GTAAHNMD 183

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           LS+ RA +     + +GV   R++   G         +  ++    NRR++I++
Sbjct: 184 LSVRRAEAVKAYAIAAGVDASRLTT-QGKGDTEPIADNTTVDGRTQNRRVEIVI 236


>gi|254561554|ref|YP_003068649.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
 gi|254268832|emb|CAX24793.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
          Length = 337

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           + Q        L   ++ I D  +       ++          +N++       ++ +  
Sbjct: 43  LSQELTGRDAVLTRLNRQIADLTDLLALERSSRRAQEEAASGLRNTLTATEAERDRLRAL 102

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                     S    ++           + +      +  +++ ++       L+  +  
Sbjct: 103 TDASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235
             + + R+ +L  +++  L+  V +       F      ++ S  D R         +  
Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQVIGSRTDVRIVGDRFVLQSEV 221

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +F   S+   PE    L +I   +        A    V+ + GHTDA P ++     NW 
Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           LS  RA +  Q L   G+   R+   + F   +   +     +   NRRI++ + +R
Sbjct: 282 LSASRAIAVVQYLRSKGLPPQRLLAGA-FGEFQPLDSGTSEEAYSRNRRIEMKLTER 337


>gi|86139806|ref|ZP_01058372.1| OmpA domain protein [Roseobacter sp. MED193]
 gi|85823435|gb|EAQ43644.1| OmpA domain protein [Roseobacter sp. MED193]
          Length = 218

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
              +    ++L +  EK ++   +  +  +     +      +     A         + 
Sbjct: 17  GLTACTDTDALRQPGEKERNGLIAGAIVGAGLAGLSNSSNKGAAVVAGAAAGALLGGVIG 76

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++    + L       G+    T   +++S+ +      F   S+   P     L+++ 
Sbjct: 77  SQLDKQEAELRESLSNNGITIVNTGDRLIVSLPNDLT---FASDSAAISPAVESDLRQVA 133

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + +         + GHTD+      A  N  LS  RA +    +   GV  +R+    G 
Sbjct: 134 QSIVRYPNSSVQVIGHTDSD---GDASYNQTLSEQRANTVADQVQAGGVPYNRLQTF-GR 189

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +   ++      + NRR++I++
Sbjct: 190 GESQPVASNLTAEGKAQNRRVEIVI 214


>gi|114046351|ref|YP_736901.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113887793|gb|ABI41844.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 514

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 9/155 (5%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +       Q  +  IS+    +  ++  K   ++       IS  D+    MF   S+  
Sbjct: 101 SASTNADNQQNSLLISANNQAMSKEDQEKYSDYQVVGMAATISSTDEM---MFGSGSAEA 157

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +    LQK+  +   S + I I GHTDA         N  LS  RA     +  ++G+
Sbjct: 158 TAQAKQKLQKLAAIYKDSKQNILITGHTDA---SGSESLNQTLSEARARYVATLFNQAGI 214

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
             +R+    G    +      ++   + NRR++I+
Sbjct: 215 PTERLF-FQGAGESQPVAANTNETGKAKNRRVEIV 248


>gi|300023765|ref|YP_003756376.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525586|gb|ADJ24055.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 716

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 11/250 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
           K DL+       N +    G         R+      +   +        +    E  + 
Sbjct: 469 KTDLAWKATRAPNGMITLEGDVPDDPARVRVIETAQRIYPGESITDQMKIVGAPPEPWQS 528

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             +    + +  +  +  +         A + ++   ++   +S+ L           V+
Sbjct: 529 ATRVALEQLARLRRGDVEMSGKEVMIQGAAESERVADEIRSVLSTDLPPGFKVRDAITVM 588

Query: 217 FETTR----TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271
               +       L+     + T  F+++ +    ++   L+ + EV        I I GH
Sbjct: 589 TGEEKAADSCQTLMRQTSAKGTINFERAKADLTSDSTQTLRDLVEVANECPSFSIEIEGH 648

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNS 329
           TDA         N RLS  RA +    L ++GVS  R+S I G+   R    +  +   +
Sbjct: 649 TDAE---GTDERNQRLSDRRARAVADFLTQNGVSARRLSTI-GYGATRPVADNATETGRA 704

Query: 330 ANRRIDILVE 339
            NRRI+  V+
Sbjct: 705 KNRRIEFNVK 714


>gi|162454304|ref|YP_001616671.1| OmpA family outer membrane protein [Sorangium cellulosum 'So ce
           56']
 gi|161164886|emb|CAN96191.1| putative OmpA family outer membrane protein [Sorangium cellulosum
           'So ce 56']
          Length = 488

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
           + +E+ P E     KI+ S +  IT       +                   S+ +  + 
Sbjct: 244 LNEEETPLEALGYVKINPSEEWEITAGPGIGALAGYGVPIFRVFAGVKYTPTSHDRDHDG 303

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
             +   +  +  +D     D +    ++ +     +          K+ +  +       
Sbjct: 304 VDDERDQCPDVPEDRDADYDSDGCPEEDADDDHDGVPNADDECPDEKETINGVED----- 358

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                 D     V +E     I  +I        F   S+    ++   L ++  V+  +
Sbjct: 359 -DDGCPDKGEPRVAYEQGEFVIRDTIR-------FRTGSAELEQDSYRTLDQVALVMKAN 410

Query: 263 TE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            E   + + GHTD +        N  LS  RA +  + L++ GVS  R++   GF   R 
Sbjct: 411 PEIERLRVEGHTDET---GTPELNQELSEQRAETVRKYLIRKGVSPGRLTA-EGFGSDRP 466

Query: 321 KIA-SDPMN-SANRRIDILVED 340
               +DP + + NRR++ ++++
Sbjct: 467 VAEGTDPASLAKNRRVEFVIDE 488


>gi|77460334|ref|YP_349841.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77384337|gb|ABA75850.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 270

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 11/188 (5%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
                E +              +  L  +R +     +K +S    G   +  +  +   
Sbjct: 85  SQRYSEIAREHTNQVLNEERVAKLELERQRLQLALRESKLLSVQQQGKWLEEQIVALATT 144

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +        V+ KI + L  +   ++ I G+TD++  
Sbjct: 145 QTDRGLVMTLGD----VLFDTGEAELKNSANRVVLKIVQFLQLNPKRIVRIEGYTDST-- 198

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
               ++N +LS DRA S   VL   G+ E RI ++ G+       A+      + NRR++
Sbjct: 199 -GGKQENLKLSRDRAQSVADVLTDLGIDEKRI-QVEGYGDEYPVDANASERGRAQNRRVE 256

Query: 336 ILVEDRQG 343
           I+  D +G
Sbjct: 257 IVFSDEKG 264


>gi|225012825|ref|ZP_03703259.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225003099|gb|EEG41075.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 9/174 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +               +   +   + ++L G++ +     +     +  + +SI D+ 
Sbjct: 98  ESMKEKDIRIQRMQDAVTKKDSVTLALVTSLKGVLGNMSDDDIEINVEKGVVYVSISDKL 157

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLD 290
              +F   S         VL K+  V+ +  E    + GHTD  P ++    DNW LS+ 
Sbjct: 158 ---LFRSGSYTVTSRAKEVLGKVATVVNNKPELEFMVEGHTDNVPIKSDGIVDNWDLSVK 214

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA +  ++L K  GV+  R++   G + +     +D     + NRR  I+V  +
Sbjct: 215 RATAVVRILEKDFGVAPARMTAA-GRSFYIPVADNDTAANRAKNRRTRIVVLPK 267


>gi|254428835|ref|ZP_05042542.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
 gi|196195004|gb|EDX89963.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
          Length = 221

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 12/201 (5%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISS 201
             +  + + K         +  ++            KE+ LA      +    +   +  
Sbjct: 24  PYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERKERALAGAGIGAVTGGGVGYYMDV 83

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L       GV        I++++        F   S+        VL  + EVL  
Sbjct: 84  QEAKLRQKLEGAGVSVTRDGENIILNM---PGNLTFATDSTNVKSSFDPVLDAVSEVLNE 140

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               +I + GHTD++      R N  LS  RA +    L   GV + R+  + GF   + 
Sbjct: 141 YKSTMIQVAGHTDST---GGDRYNLLLSQQRAQAVSNKLSGYGVEQVRLDTV-GFGETQP 196

Query: 321 KIASDPMNSA--NRRIDILVE 339
             +++  +    NRR+++ + 
Sbjct: 197 IASNNTASGREQNRRVELTLL 217


>gi|74318813|ref|YP_316553.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
 gi|74058308|gb|AAZ98748.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
          Length = 266

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    L +  E L       + + GHTD+   +     N  LS  RA + 
Sbjct: 163 FAYDKATLRPEAREKLDQAVETLKGWGEGTVEVGGHTDS---KGSEAYNMELSRRRAEAV 219

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            + L+  G+  +++     +   +      +D     NRR+++
Sbjct: 220 REYLIGKGIPAEQLVT-KAYGESQPIADNGNDIGRFKNRRVEL 261


>gi|298369467|ref|ZP_06980784.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282024|gb|EFI23512.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 224

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        V  E     I + + +      F  +S+         L    +
Sbjct: 76  YMDYQAKKLRESLANTDVKVEQQGNQIKLVMPENVT---FATNSATLSANARDALTAASK 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA S    L   GV+  R++   G  
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAINDPLSRNRAQSVASFLQSQGVAGSRLTTA-GHG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
             +   ++      + NRR++IL+   Q
Sbjct: 189 SRQPVASNATPEGRAQNRRVEILINPDQ 216


>gi|325335721|gb|ADZ11995.1| Flagellar motor protein [Riemerella anatipestifer RA-GD]
          Length = 281

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +    R   L   +S+ L   + +   + V  +  +  ++IS+ D+    ++     
Sbjct: 106 KQLISTNARNDSLNLALSNKLKRSLDNVADQDVQVKVLKGVVMISLSDKM---LYRSGDY 162

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
             LP    VL K+ +V+    +    I G+TD  P  + +  +DNW LS  RA S  +VL
Sbjct: 163 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNVPLNSASLPKDNWDLSALRATSVAKVL 222

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               GV   RI+   G + +  K  +      + NRR +I++  +
Sbjct: 223 QNQFGVDPSRITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 266


>gi|307547058|ref|YP_003899537.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
 gi|307219082|emb|CBV44352.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
          Length = 223

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 10/203 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           ++       R+         +     +     +       +  I A         +   +
Sbjct: 23  TDPYSGQTQRNKTGTGAAIGAAIGAAAGALSGDGSTSRRDRALIGAAAGAAAGGGIGAYM 82

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L +     G+  E     I++++    +   F   SS   P     L  +  VL
Sbjct: 83  DRQEQQLRSSMQGTGIGVERQGNDIVLNM---PSEVTFGFDSSDLTPAATSALNDVSNVL 139

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              T+  I+I GHTD++     A  N RLS  RA +  Q L +SGVS  R++ + G+  +
Sbjct: 140 TQYTDTRINIAGHTDST---GDAGYNQRLSERRAQAVGQYLSQSGVSAGRLN-MQGYGEN 195

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++D     + NRR+++ + 
Sbjct: 196 QPVASNDTEAGRAQNRRVEMTLT 218


>gi|289209442|ref|YP_003461508.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288945073|gb|ADC72772.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 221

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L       GV        I++++        FD   +   PE   VL  + 
Sbjct: 78  NYMDRQEAELREQLRGTGVSVTRDGDNIILNM---PGHITFDIDRTDIKPEFEEVLNSVA 134

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VLA   +  I + GHTD          N  LS  RA S  + L++ GV   R+  + GF
Sbjct: 135 LVLAEYDQTGIEVAGHTD---ITGRVEYNMDLSERRAQSVGRALIRRGVQSVRVDTV-GF 190

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
             H+    ++       NRR+++ +
Sbjct: 191 GPHQPIATNETAEGRALNRRVELTL 215


>gi|85704503|ref|ZP_01035605.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
 gi|85670911|gb|EAQ25770.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
          Length = 461

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 7/168 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            +++    A            +I      L A+     V     ++ I + +     + M
Sbjct: 296 QVAELLRRAPPPPPPPPPNDGQIERVKGFLEAEIREGIVEVFQDQSTITVRLT---GSGM 352

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295
           F   S    P     L ++   L  +   I I GH+D  P ++     N  LSL RA S 
Sbjct: 353 FGSGSDQLQPAFDTPLSRVANALNDAEGPIIIVGHSDNVPIKSSRFPTNMHLSLARAESV 412

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            + L      + R+    G A       +      + NRRI++++  +
Sbjct: 413 MRTLSTQIDDKARLKA-EGHADKDPIADNGTSEGRAKNRRIEVVLIRK 459


>gi|218660571|ref|ZP_03516501.1| outer membrane lipoprotein [Rhizobium etli IE4771]
          Length = 196

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     G+        I++++        FD       P     L  + 
Sbjct: 53  NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 109

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 110 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 165

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 166 GPSQPVASNASEAGRAQNRRVEIQI 190


>gi|187923017|ref|YP_001894659.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187714211|gb|ACD15435.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 217

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  FD +S    P    VL ++ + +  + E V  + GHTD++        N  LS++
Sbjct: 103 PSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELVAQVVGHTDST---GQPAYNQTLSVN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA S    L + GV+  R+S   G    +    ++     +ANRR++I +  
Sbjct: 160 RAESVTGYLGQRGVAPQRLSA-QGLGQTQPIADNNTEAGRAANRRVEIYLRA 210


>gi|148546401|ref|YP_001266503.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148510459|gb|ABQ77319.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 239

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284
           +  +D     MF   S+         LQ +   L   +   + + GHTD          N
Sbjct: 127 VITLDDNGAVMFAFDSAELTLAAQQRLQGLVAKLNSPTVTKVRVIGHTDGV---GSDSYN 183

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LS  RA S  + L+  G+   +++   G         ++     + NRR+++ +
Sbjct: 184 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238


>gi|325121508|gb|ADY81031.1| hypothetical protein BDGL_000445 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 475

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 76/271 (28%), Gaps = 17/271 (6%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P    L T  KG   +             L        +S       T+Q       + +
Sbjct: 217 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSSTQDCNVDTSQTYAAGFTDKD 276

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                          SL    +K            ++  +    +P            ++
Sbjct: 277 ALAGVLGALKGVPNASLEWIGDKITLKAADAAALAALTAKVKALVPHTEVVSTAPETAEQ 336

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + +      + L  +  +N+    L +     I+           F   SS    +   
Sbjct: 337 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 386

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L +   +L     V  ++ GHTD++     A  N  LS  RA +    L   GV   ++
Sbjct: 387 ILDQAATLLNKVNGVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLTSKGVEGSKL 443

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               G    +    +        NRRI+  V
Sbjct: 444 VA-QGHGSDQPVAENTTEEGRFKNRRIEFSV 473


>gi|319957287|ref|YP_004168550.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
 gi|319419691|gb|ADV46801.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
          Length = 351

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 11/143 (7%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              +    + +   V   +  + + +         +FD +  I  PE    L  + + + 
Sbjct: 217 KAEAKPTPEQVGIIVRKTSEGSMLTV-----PEKVLFDFNKFILKPEAKKALDVVADYIR 271

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 I + G+TD          N RLSL RA S    LM  G  + ++ KI G     
Sbjct: 272 SHPARQIVVTGYTDNI---GTDAYNLRLSLQRAQSVADYLMDCGKVDPKLFKIVGKGKAN 328

Query: 320 LKIASDPM--NSANRRIDILVED 340
               +      + NRR++I +  
Sbjct: 329 PIADNATEEGRAKNRRVEIRLIR 351


>gi|319779310|ref|YP_004130223.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
 gi|317109334|gb|ADU92080.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
          Length = 188

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   VL +I E +   T    I  GHTD+         N +LS  RA +
Sbjct: 82  FFDFDKSSLKPEGRTVLDQIAEQVKLLTLESLITVGHTDSI---GTNAYNQKLSERRAAT 138

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
               L+  GV  ++I   SG    +    +      + NRR+DI
Sbjct: 139 VKNYLIDKGVPAEQIIA-SGRGETQPIADNRTREGRAQNRRVDI 181


>gi|325106498|ref|YP_004276152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324975346|gb|ADY54330.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 435

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
             + + + ++       I+   I       FD   +     +   L ++ ++L      +
Sbjct: 308 PREIVREKIVVTEADRKIVDEAIKNLE---FDLGKATIRSTSYATLNRVAQLLVEKNFSL 364

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + GHTD +        N RLS +RA S    L+  G +  RI   +G+   +   ++  
Sbjct: 365 KLAGHTDNT---GSMELNMRLSKERAESVKAYLVSQGANASRIEA-TGYGPTQPIASNKT 420

Query: 327 MNSA--NRRIDILV 338
                 NRR++  +
Sbjct: 421 AEGRQKNRRVEFTL 434


>gi|296272285|ref|YP_003654916.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296096460|gb|ADG92410.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 343

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 7/173 (4%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            ++    P + +E    +  + +  +  K + S   G++                 +  I
Sbjct: 173 GKKAAPAPEVKEEPKPVVMEEPKKVEEPKVLDSDNDGVIDSLDQCPDTMRGANVDKVGCI 232

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
                   F   SSI   +    +++  E L    +   +I GHTD   +    + N  L
Sbjct: 233 KMLDLEVHFPIDSSIIDEKYKHRIKEFAEFLNKHPKLKATIEGHTD---YTGTKKYNLWL 289

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           S  RA SA++ L K  V   R+  I G+   R    +      + NRRI+  V
Sbjct: 290 SKRRANSAFEALKKYDVDPARLKTI-GYGETRPIATNKTKEGRAKNRRIEATV 341


>gi|299771293|ref|YP_003733319.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
 gi|298701381|gb|ADI91946.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
          Length = 217

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 52/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYSTLNKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI    GF 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGFG 189

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                  +        NRR++I +  +Q
Sbjct: 190 SSNPIADNSTATGREQNRRVEISIYAKQ 217


>gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 318

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F  +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S    L++ G+  DRI    G   +    +++       NRR++++V
Sbjct: 262 AESVANALVEKGIDADRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309


>gi|221213356|ref|ZP_03586331.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221166808|gb|EED99279.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 316

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 14/246 (5%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT----RDSEKGKDL 157
               +     +   G      +          L   + +    N +      D     + 
Sbjct: 74  TAGTLAPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL--VADNIVKGV 215
             +         ++            + MK +   +   ++I+S ++        I  G+
Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYTIRNGL 193

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
               +  G+L   +  R    F+  S+   P+   +L ++   LA        I GHTD 
Sbjct: 194 RVSASEQGLLDQTLANRTIE-FETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN 252

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
                    N  LS  RA +    L+  G++  +++  +G    +    +D     + NR
Sbjct: 253 ---SGNRTSNIALSQARADAVKGYLITKGIAPQQMTT-TGVGPDQPIAPNDTADGRARNR 308

Query: 333 RIDILV 338
           RI+  V
Sbjct: 309 RIEFRV 314


>gi|163851783|ref|YP_001639826.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|218530589|ref|YP_002421405.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|240138946|ref|YP_002963421.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
 gi|163663388|gb|ABY30755.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
 gi|218522892|gb|ACK83477.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|240008918|gb|ACS40144.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
          Length = 337

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           + Q        L   ++ I D  +       ++          +N++       ++ +  
Sbjct: 43  LSQELTGRDAVLTRLNRQIADLTDLLALERSSRRAQEEAASGLRNTLTATEAERDRLRAL 102

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                     S    ++           + +      +  +++ ++       L+  +  
Sbjct: 103 TDASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235
             + + R+ +L  +++  L+  V +       F      ++ S  D R         +  
Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQVIGSRTDVRIVGDRFVLQSEV 221

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286
           +F   S+   PE    L +I   +        A    V+ + GHTDA P ++     NW 
Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           LS  RA +  Q L   G+   R+   + F   +   +     +   NRRI++ + +R
Sbjct: 282 LSASRAIAVVQYLRSKGLPPQRLLAGA-FGEFQPLDSGTSEEAYSRNRRIEMKLTER 337


>gi|281421937|ref|ZP_06252936.1| OmpA family protein [Prevotella copri DSM 18205]
 gi|281403991|gb|EFB34671.1| OmpA family protein [Prevotella copri DSM 18205]
          Length = 284

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 87/243 (35%), Gaps = 14/243 (5%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            + + ++ S  Q  + +         +  +Q    K+   +          +        
Sbjct: 31  QNENKELSSNYQATKEKLAATEASLAAAQEQLATAKSDYAKLQNSLDKSLNNASQNNVSI 90

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           ++    +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+
Sbjct: 91  EKLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEEMKEVDVQVLKGVVYISL 150

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------ 281
            D     ++   S          L KI +++    +    + G+TD  P    +      
Sbjct: 151 ADNM---LYQSGSYEVNSRAQETLSKIAKIITDYKDYDVLVEGNTDNVPVSTTSAKMKNI 207

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           R+NW LS  RA S  Q L    GV+  R++   G   +     +D       NRR  I++
Sbjct: 208 RNNWDLSALRAASVVQYLQDHFGVNPKRLTAG-GRGEYNPVTTNDTEVGKQRNRRTQIII 266

Query: 339 EDR 341
             +
Sbjct: 267 TPK 269


>gi|83814332|ref|YP_446691.1| chemotaxis protein [Salinibacter ruber DSM 13855]
 gi|83755726|gb|ABC43839.1| probable chemotaxis protein [Salinibacter ruber DSM 13855]
          Length = 241

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 9/154 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R +  A++    L  L    + + +  +  + GI + I D     MF    +  L  +
Sbjct: 67  QSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIHVVIADSL---MFRTGRARLLKPS 123

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VS 305
             VL+++  +L+     + + GHTD  P        NW LS  RA SA + L +      
Sbjct: 124 RTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFPSNWELSTARAASAVRFLQERAPEYD 183

Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
             R   + G A    + ++  D   + NRR++I+
Sbjct: 184 SSRFQAV-GHASTDPRASNQTDEGRAKNRRVEIM 216



 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 30/93 (32%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
              W   Y D MT+L+ FF+++  ++       +     F         +   +  + + 
Sbjct: 4   APFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNFQRQPGMFSGSKSVVPADYSS 63

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
               S+ +      E   K   +  +G   Q  
Sbjct: 64  GSSQSRARKRAEQYEQFLKRLEERGLGEKIQAD 96


>gi|331002828|ref|ZP_08326342.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413317|gb|EGG92685.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 409

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 88/284 (30%), Gaps = 17/284 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
              ++   + + T   G     +  +  +  +      +++  N   +     +   QY+
Sbjct: 129 AGQYSDGNQTVQTEGDGSGQYNDSEKGITIQRDADGSGQYLDSNKGIILQVDADGSGQYK 188

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
                I    ++  +   KNS    S    +          + + ++             
Sbjct: 189 DDRYGINLQVDANGTGMYKNSQNDVSIAVDEEEVIYKAGDVVIEIKSDGSGSYENSATGL 248

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFETTRTGILISIIDQRNTPMF 237
           +           KI      + AD +           V          I I       +F
Sbjct: 249 IIENDGQGKAVIKIDDDEKEVKADPLDFTYKLPLLNSVPAVPAIEANSIMITMDAG-VLF 307

Query: 238 DKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           D        E+   L  + +VL   +     I GHTD+         N  LS +RA S  
Sbjct: 308 DVDKYDLRNESKETLNNLAKVLKEANISAFEIDGHTDSD---ADDAYNQTLSENRANSVK 364

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           + L+  GV+ +     +G+   R   ++D       NRR++I++
Sbjct: 365 EYLVSVGVTAN--ITTNGYGESRPVASNDTPEGKQQNRRVEIII 406


>gi|327405440|ref|YP_004346278.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320948|gb|AEA45440.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 367

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 7/150 (4%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D+   +       V D+I +      T   + +  +   +   F+   SI LP     
Sbjct: 220 VDDIFIGLEENKKPPVQDSIHEKANTVDTSINLTVGDVYVLHNLQFESGKSILLPNEYPE 279

Query: 252 LQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L+     +         + GHTD    +    DN  LSL+RA +  Q L+  G+++++I 
Sbjct: 280 LENFIRHVEKYPNQTLLVTGHTDNVGNKG---DNKMLSLERANAIKQYLVAKGINKNKIV 336

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338
            I G        +++       NRR++I +
Sbjct: 337 -IEGKGDEIPLDSNETEEGRKKNRRVEISI 365


>gi|325523698|gb|EGD01964.1| OmpA family protein [Burkholderia sp. TJI49]
          Length = 226

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293
           +F+   +  LPE+  VL +I   L    T  I + GHTD  P  N     NW LS  RA 
Sbjct: 119 LFNVGDARLLPESAPVLDRIALALGAHATGDILVEGHTDRVPIANAKYESNWELSSARAG 178

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           S  + L + GV+  R++ + G A  +  +A D     + NRR+ I V
Sbjct: 179 SVVRYLAERGVAPHRLAAV-GRADTQPLVAGDDAASRARNRRVTIFV 224



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
          +   D      G W I YAD +T LM  FL ++++ 
Sbjct: 17 RDDEDAEGTQAGRWLISYADLVTTLMVLFLALYVLQ 52


>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 325

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 8/137 (5%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-T 263
                     V         + ++ + + T  F   SS         L    + L     
Sbjct: 178 AYHWGAAAPIVEPVYVDQVTITTLEELKLTVPFAFDSSTITAGDAAKLAPFEQRLKDQGA 237

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             I + GHTD+         N +LS  RA +    L +   V E RI    G        
Sbjct: 238 AQIYVIGHTDSR---GSEAYNQKLSEKRAQAVADALRQHLNVGETRIIA-QGRGESDPVA 293

Query: 323 ASDPM--NSANRRIDIL 337
           ++      + NRR+DI+
Sbjct: 294 SNQTEEGRAQNRRVDII 310


>gi|327481195|gb|AEA84505.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
          Length = 244

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 7/226 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
              ++++ +        +                   G+    +     +  +       
Sbjct: 17  EPQREEEQEAWLITYLDMLTLLLVMLVIMLALAGKGDGEQNDPAASAMLAAGELGVALPA 76

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P +    +A                ++       +   +        I   I    +  +
Sbjct: 77  PAAPIPSIAPVPTPAADAQPDDPQESMPTTPGMALGDDIQVIVNEGSISFRI---SSEIL 133

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F    +      + V+ ++   LA +   I + GHTD  P +      NW LS  RA S 
Sbjct: 134 FGSGRAELEDAGLEVIDRLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSV 193

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            + L  +G+   R+S  +G+A  R    +        NRR++++++
Sbjct: 194 VRYLQLAGIEATRLSA-TGYADTRPLADNADERGRASNRRVELVMQ 238


>gi|152972417|ref|YP_001337563.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206578997|ref|YP_002236080.1| OmpA family protein [Klebsiella pneumoniae 342]
 gi|238897010|ref|YP_002921755.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262040618|ref|ZP_06013856.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288933077|ref|YP_003437136.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
 gi|290511871|ref|ZP_06551239.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
 gi|329999890|ref|ZP_08303557.1| OmpA family protein [Klebsiella sp. MS 92-3]
 gi|150957266|gb|ABR79296.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206568055|gb|ACI09831.1| OmpA family protein [Klebsiella pneumoniae 342]
 gi|238549337|dbj|BAH65688.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041982|gb|EEW43015.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288887806|gb|ADC56124.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
 gi|289775661|gb|EFD83661.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
 gi|328538172|gb|EGF64327.1| OmpA family protein [Klebsiella sp. MS 92-3]
          Length = 220

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +S+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMQGTGVSVTRNGDNIVLNM---PNNVTFDSNSANLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ +RI + +G  
Sbjct: 137 VLKEYEKTAVNVVGYTDST---GSKDLNMRLSQQRADSVASALITQGVAANRI-RTTGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|110637988|ref|YP_678195.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280669|gb|ABG58855.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 517

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGH 271
           + V  +     + I    Q N   FD S S    E+   L ++  +L ++    I I GH
Sbjct: 390 QEVKQDLYLVPVEIGQTVQLNNIFFDVSKSTLRQESYAELDRLYLILQNNPVMEIEIDGH 449

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD          N +LS DRA +    L+K G++  RI    GF   +  +++D      
Sbjct: 450 TDNV---GDPIINMQLSNDRANAVKDYLLKKGIAPGRIVT-KGFGGTKPIVSNDTEELKK 505

Query: 331 -NRRIDILVED 340
            NRR++  +  
Sbjct: 506 LNRRVEFTILK 516


>gi|307718609|ref|YP_003874141.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
           6192]
 gi|306532334|gb|ADN01868.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
           6192]
          Length = 243

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           ++   +R + L +     +S    +   K V  +    G++I++        F  +S+  
Sbjct: 80  SLPSMERGRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAAD---AFFRSASAEL 136

Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQV 298
             E           L  S E     I I GHTD  P         NW LS  RA +    
Sbjct: 137 NIEAARETLIKLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHF 196

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           L   GV E+   ++ G A       +        NRRIDI++  
Sbjct: 197 LSDYGVDENHF-QVMGLADTVPLADNSTPEGRAYNRRIDIVILS 239



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
          + K+             + + Y D +T+L+ FF++M+     D    + I   F
Sbjct: 1  MAKEMQKKKKCDEGAPDYMLTYGDMVTLLLTFFVMMFTTATIDGYQLRLILSAF 54


>gi|153832075|ref|ZP_01984742.1| flagellar motor protein [Vibrio harveyi HY01]
 gi|148871690|gb|EDL70531.1| flagellar motor protein [Vibrio harveyi HY01]
          Length = 430

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 7/162 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                    K    +          L  +     V  +     + ISI  Q    +F+  
Sbjct: 270 APAQVESTVKTDSQVTDIAERVSMYLATEISKGLVTVDALPDRVRISIKAQD---LFESG 326

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299
           S+  +     V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  + L
Sbjct: 327 SAEVVEYIQPVISKLARTLEATEGKILVAGHTDDKPIFTSKYPSNWHLSLARATAMSEQL 386

Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           + +   E R+    G    R  + +  D   + NRRI+I + 
Sbjct: 387 IANSALEGRVLP-EGLGDARPLVENTSDENRALNRRIEIDLM 427


>gi|327396585|dbj|BAK14006.1| putative OmpA-family membrane protein [Pantoea ananatis AJ13355]
          Length = 353

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 6/115 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
           +I+   +  +FD   S     +  +L      +       I + GHTD +      + N 
Sbjct: 214 TIVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNT---GNPQLNQ 270

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            LSL RA +    +  +G   +    + G+   R   A+      + NRR++I +
Sbjct: 271 ALSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 325


>gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
 gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
          Length = 318

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F  +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S    L++ G+  DRI    G   +    +++       NRR++++V
Sbjct: 262 AESVAHALIEKGIDADRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309


>gi|254463375|ref|ZP_05076791.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206679964|gb|EDZ44451.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 222

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 10/171 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +            A+        +   +    + L        V    T   +++S+   
Sbjct: 56  DDSKERKQNAIKGALIGGAGGAVVGNVLDKQAAELQKSLGNDRVTITNTGDRLIVSLPQD 115

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F   S+         L  +   L       + + GHTD++        N  LS+ 
Sbjct: 116 IT---FASDSATLSSGIQSDLNAVATNLQSYPNSTVQVIGHTDSTGEAG---YNQNLSVQ 169

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           RA S   VL  +GVS  R+  I G    +   ++      + NRR++I++ 
Sbjct: 170 RANSVVNVLAGAGVSFTRLQGI-GRGEDQPVASNLTEEGKAQNRRVEIVIL 219


>gi|121610060|ref|YP_997867.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121554700|gb|ABM58849.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 242

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N RLS+ RA
Sbjct: 132 DAFFDFDKSVIKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSV---GTDAYNQRLSVRRA 188

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 189 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTSEGRAKNRRVEIEVVGTR 239


>gi|298372474|ref|ZP_06982464.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275378|gb|EFI16929.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 633

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F  +S    P++   + ++   L  + +V I I GHTD          N  LS +R
Sbjct: 528 NNIFFAFNSYELEPKSEREIMQLYSFLRKNPDVSIEIVGHTDNI---GGENFNQTLSENR 584

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A +    L++ G+   R+    G    +   +++       NRR++ +++
Sbjct: 585 ALAVMMALIEKGIDAGRLY-YRGMGLSQPIASNNTEEGREKNRRVEFVIK 633


>gi|296159938|ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295889921|gb|EFG69718.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 318

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 87/282 (30%), Gaps = 16/282 (5%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQ 120
           +I     P   +    + G           +      +I       +     + +G    
Sbjct: 40  SIHTTILPPASSAPVGNAGPAVNTAGLASGTTGAGTGAITAAPPPANATPGQVVVGGKVP 99

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPP 177
            +  +         +    +   +  +   +          K    +     +    +  
Sbjct: 100 DEATKAAVLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDG 159

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              +    +  + + Q LA  +++ L+      I  G+    +  G+L   +  R    F
Sbjct: 160 TQIDVKGEVHNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-F 216

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +  S+   P+   +L ++   +   T     I GHTD          N  LS  RA +  
Sbjct: 217 ETGSATLTPQGRAILDQMAAAMMKMTNKTVAIIGHTDN---SGNRTSNIALSQARADAVK 273

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
             L+  G+   +++  +G    +   ++D     + NRRI+ 
Sbjct: 274 GYLVAKGIPPQQMTT-TGVGPDQPIASNDTTDGRARNRRIEF 314


>gi|170696413|ref|ZP_02887541.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170138674|gb|EDT06874.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 322

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 90/275 (32%), Gaps = 16/275 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQKKQYQRL 127
           P   +    S G           +      ++       +     + +G     +  +  
Sbjct: 51  PSPSSTTAGSAGPAVNTAGLASGTTGAGTGAVTASPPPANAAPGQVVVGGKVPDEATKAA 110

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKIL 184
                  +    +   +  +   +          K    +     +    +     +   
Sbjct: 111 VLARLRDTYGSANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKG 170

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++ + + Q LA  +++ L+      I  G+    +  G+L   +  R    F+  S+  
Sbjct: 171 EVRNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATL 227

Query: 245 LPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+   +L Q    +L  +T+ ++I GHTD          N  LS  RA +    L+  G
Sbjct: 228 TPQGRAILDQMAAAMLKMATKTVAIIGHTDN---SGNRTSNIALSQARADAVKGYLVAKG 284

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           +   ++S  +G    +   ++D     + NRRI+ 
Sbjct: 285 IPPQQMST-TGVGPDQPIASNDTADGRARNRRIEF 318


>gi|3493603|gb|AAC33455.1| outer membrane protein homolog [Vitreoscilla sp. C1]
          Length = 217

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L        V        I + + +      F   S          L  + 
Sbjct: 75  AYMDHQERQLRQSLANTQVEVNRVGDEIRLVMPESIT---FATGSYQLNSSASTSLNSVS 131

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VLA  T+   +I GHTD++        N  LS +RA +    L+   V+ +RI+ + G 
Sbjct: 132 SVLAQYTDTTINIVGHTDST---GSDAINEPLSRNRASAVANYLVSRNVASNRITTV-GA 187

Query: 316 AHHRLKIASDP--MNSANRRIDILV 338
              +   +++     + NRR++I V
Sbjct: 188 GCRQPVASNNTVAGRAENRRVEITV 212


>gi|306820526|ref|ZP_07454159.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551440|gb|EFM39398.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 432

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 89/274 (32%), Gaps = 14/274 (5%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
                   G + ++N   ++        I+          K GS   K +   +   +  
Sbjct: 161 LQTDGDGSGQYSDENIVIQTDGKGGGQYINNKTGITLQADKDGSGQYKDEKNDIVLQVDS 220

Query: 134 LSNSQQSEHCK----NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             + Q S+  +          S           +    +   +Y    L+       K K
Sbjct: 221 DGSGQYSDGIRKISIMVGKDGSATYNYNTGEVLIRNHGDGTGSYRNETLNMIIYNEGKGK 280

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
             ++   +KI      L     +  +        I  +  +I   +  +FD +      +
Sbjct: 281 ADIRVNGEKILVDAEPLEKAGKLPTLSPIPAVPPIEANSVMIKLDSGVLFDVNKYDIRED 340

Query: 248 TIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              VL K+ +VL     E   I GHTD+         N  LS +RA S    L+K+G++ 
Sbjct: 341 ANDVLMKLIDVLKKAKVEKFEIYGHTDSDD---TDEYNQVLSENRANSVKDFLVKNGITA 397

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +      GF   +    +        NRR++I++
Sbjct: 398 N--IATKGFGEKKPIATNSTKEGKQLNRRVEIII 429


>gi|170736167|ref|YP_001777427.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169818355|gb|ACA92937.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 223

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L   +     A     +       ++     L +      +       G+ I I  + 
Sbjct: 60  QTLARQAGGAATAAVDTAKADPAPPWLAL----LDSLKSNGRISLVKAPHGVEIGIDAK- 114

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290
              +F+   +  LP++  VL +I + L+  T   I + GHTD+ P  N     NW LS  
Sbjct: 115 --ILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSA 172

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S  + L + GV+  R++ I G A  +  +A       + NRR+ I V
Sbjct: 173 RAGSVVRYLSERGVAPHRLAAI-GRADTQPLVAGGDAGSRARNRRVTIFV 221



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          +   +      G W I YAD +T LM  FL ++++         A++  +    +    A
Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69

Query: 80 SKGIFDEQNPPERSS 94
          +    D         
Sbjct: 70 ATAAVDTAKADPAPP 84


>gi|189347037|ref|YP_001943566.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
 gi|189341184|gb|ACD90587.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
          Length = 229

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D  V+G   E    GI +      +  +F   S+     +   ++++  ++    
Sbjct: 82  QAAEIDRDVEGATVERMGEGIRVVF---DSGILFSTGSATITATSRDNIERLARIINRYD 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +   +  GHTD          N  LS  RA +   +L   GV   R+S + G+   R   
Sbjct: 139 DTNVVIEGHTDTV---GNEESNQLLSEHRAEAVSNLLKAYGVYGSRLSPV-GYGESRPVA 194

Query: 323 ASDPMNSA--NRRIDILV 338
           +++  +    NRR++IL+
Sbjct: 195 SNETESGRRLNRRVEILI 212


>gi|32490782|ref|NP_871036.1| flagellar motor protein MotB [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165988|dbj|BAC24179.1| motB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 326

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           + ++   K  +RL      +   L +     +    +       G+ I IID +  PMF 
Sbjct: 101 ERELNHQKDIRRLNKTRYNLQQMLRNNPRLRDFQSNMKITLVHEGLRIEIIDSKKRPMFT 160

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAY 296
                  P    +++ +  VL      IS+ GHTD  P+ N      NW LS DRA ++ 
Sbjct: 161 TGGKEIAPYMRYIMRILAPVLNELPNRISLAGHTDNQPYINGERGYSNWELSADRANASR 220

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + L++ G+  D+I ++ G A+    +     +++ RRI I++  +Q
Sbjct: 221 RELIEGGLMNDKILRVIGMANTMSDVNKHHHHASQRRISIIILTKQ 266



 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
            +  +I+ +      + ++ GSWKI YADFMT +MAFFLVMW+++ +    ++ I  YF 
Sbjct: 3   KNSPMILIRWKKSQHSGHHGGSWKIAYADFMTAMMAFFLVMWLLSTSTPQQREQIADYFR 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
              K+ +  S        P  +   + ID   + 
Sbjct: 63  IPMKDSVQNSSKSSISPIPMPKQGGDNIDNKTNN 96


>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 455

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    ++K+ + +     V  +  GHTD       A  N +LS  RA + 
Sbjct: 346 FVTGKNDIQPKYAGEIKKVADYMQKYPTVKGVIEGHTDNV---GSAAANMKLSQRRAEAV 402

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+ K G++ DR++   G+   R    +        NRRI  +++ 
Sbjct: 403 RSYLIKKHGIAADRLTA-KGYGMTRPIADNGTEAGRQQNRRITAVLDS 449


>gi|319638563|ref|ZP_07993325.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
 gi|317400312|gb|EFV80971.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
          Length = 226

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        +  E     I + + +      F   S+    +    L    +
Sbjct: 76  YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGQAQSALSAAAQ 132

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA S    L   GVS  R+S   G+ 
Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVATFLQSRGVSSTRLSTF-GYG 188

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
             +   ++      + NRR++IL+   Q
Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216


>gi|154252545|ref|YP_001413369.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156495|gb|ABS63712.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 338

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 21/250 (8%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           D    +T +K +   L ++      ++            SE    +        ++ ++ 
Sbjct: 90  DSLAAATAEKDRLASLADDASGTRVAELEGKLAEEQKLSSEALSQVELLNQQISALRRQL 149

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230
                 L   ++   +++ ++ DL +++++ L+  V +       F      IL    D 
Sbjct: 150 ATLEAALEAAELKDREQQVQIADLGRRLNAALAQKVQELAKYRSEFFGRLRAILGDRQDI 209

Query: 231 --------QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDA 274
                    ++   F+  S+   P     L KI   +             V+ + GHTDA
Sbjct: 210 EIVGDRFAMQSEIFFESGSADINPSGKEQLDKIATAVREIAAEIPDDIPWVLRVDGHTDA 269

Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSAN 331
           +P        NW LS  RA +    L++ GV ++R+    GF  +           N  N
Sbjct: 270 NPIATAQFPSNWYLSSARAIAVVNYLVERGVPQNRLVAA-GFGQYHPLADGRGTAENRRN 328

Query: 332 RRIDILVEDR 341
           RRI+  + +R
Sbjct: 329 RRIEFKLTER 338


>gi|114777572|ref|ZP_01452553.1| motb protein [Mariprofundus ferrooxydans PV-1]
 gi|114552043|gb|EAU54560.1| motb protein [Mariprofundus ferrooxydans PV-1]
          Length = 232

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                T  ++      K+  +  S  K E   +PPL  +K+++ +    +  + +   + 
Sbjct: 40  STMDKTGLADIEASFRKAVSVLNSGTKTELQIIPPLQMQKLISPRE--LMLAMRQNSRAI 97

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   + D+ V+GV     R  + I      +  +FD+ S++  PE++  L K+ ++LA S
Sbjct: 98  MKNSIMDHKVRGV-ILNDRLYLRI-----PDAILFDRGSAVLKPESVKTLVKLAQMLAMS 151

Query: 263 TEVISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              I ++GHT+A      +   D W LSL RA S   +L   GVS  R+  ++G+   + 
Sbjct: 152 PGNIRVQGHTNANIDLDNSAFDDPWSLSLARAASVLHILEDEGVSPTRL-SLAGYGPSQP 210

Query: 321 KIASDP--MNSANRRIDILV 338
                     S NRR++I+V
Sbjct: 211 ISTEATPFGRSKNRRVEIMV 230



 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          KK    +   N  +W   +AD +++++ FF+++  ++  D      IE  F      L +
Sbjct: 4  KKKWPVEYQANTEAWMTTFADLVSLMLTFFILLISMSTMDKTGLADIEASFRKAVSVLNS 63

Query: 79 ASKGIFDEQNP 89
           +K       P
Sbjct: 64 GTKTELQIIPP 74


>gi|29348538|ref|NP_812041.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253569097|ref|ZP_04846507.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29340443|gb|AAO78235.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251841116|gb|EES69197.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 280

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 19/217 (8%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             Q S   K  L   ++ G  + +   +  +   E+      LS++K    +R++ + +L
Sbjct: 49  GDQLSAQIKKLLRDTTQMGNSIRQYQSMLSTNMTEQEKLNALLSQKKNELSERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I++           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMINAQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           GV+  +I + SG   +     ++       NRR +I+
Sbjct: 226 GVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261


>gi|255530070|ref|YP_003090442.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343054|gb|ACU02380.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 445

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ +SS+   ++   L K+  VL  +   ++++G+  +      A  N +LS DRA S  
Sbjct: 345 FEFNSSVLKTDSYPTLDKLSSVLRENGGKVTVKGYASSE---GTAAYNLKLSKDRANSVK 401

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             L+ SGV+  ++    G+       ++D       NRR++
Sbjct: 402 TYLVNSGVNASQVVT-KGYGEANPIASNDTEEGRIQNRRVE 441


>gi|325524318|gb|EGD02423.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
          Length = 254

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 18/259 (6%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR- 149
              S           IT    +   G      +          L   + +    N + + 
Sbjct: 1   AAGSVVHGTAGTAGTITPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQI 60

Query: 150 -------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                        ++ K    +     +    +     E    +  + + Q LA  +++T
Sbjct: 61  EVGDVATPPNWSANVQKLLGPQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANT 120

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L+      I  G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  
Sbjct: 121 LNPTYT--IRNGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGKQILDQMAAALAKM 177

Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                 I GHTD          N  LS  RA +    L+   ++  +++  +G    +  
Sbjct: 178 PNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIAPQQMTT-TGVGPDQPI 233

Query: 322 IASDPM--NSANRRIDILV 338
             +D     + NRRI+  V
Sbjct: 234 APNDTAEGRARNRRIEFRV 252


>gi|317060136|ref|ZP_07924621.1| outer membrane protein [Fusobacterium sp. D12]
 gi|313685812|gb|EFS22647.1| outer membrane protein [Fusobacterium sp. D12]
          Length = 193

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 54  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 110

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD++      + N  LS  RA S  Q L+  GV+ +R++   GF  +
Sbjct: 111 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLTS-QGFGPN 166

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +        NRR++I +  +
Sbjct: 167 NPVADNSTPEGRQMNRRVEIKIAPK 191


>gi|289675211|ref|ZP_06496101.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
 gi|330896025|gb|EGH28248.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330936859|gb|EGH41006.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330975430|gb|EGH75496.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 260

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        +        ++ +        +      D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDDDVQKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRIELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   RI  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250


>gi|218885327|ref|YP_002434648.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756281|gb|ACL07180.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 345

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 10/149 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L      +   +  +  +               +I +   +    F  +S+       
Sbjct: 201 PELLANEAALDKFVRDVFYEEKAAPAAAAAAPMDEVIVLRSIQ----FALNSAKLDATAT 256

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L +   +L      + + GHT +         N +LS  RA S    L+K GV   R+
Sbjct: 257 SILVETAAILKSKKGSVEVAGHTCSL---GTDEYNQKLSEARAKSVKDFLVKQGVESSRL 313

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDI 336
               G+   + K  +    +   NRR+++
Sbjct: 314 IT-KGYGESKPKYDNSTEETRKLNRRVEL 341


>gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 638

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               +N    +  E     I     +  N   F     I   ++ V L K+ + L  +  
Sbjct: 505 SFTVNNEQSFINLEIPLEAIEKDRAEVLNNIFFKTGEYILDDKSKVELDKMSDFLHKNKT 564

Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           +   I GHTD         +N  LS  RA S    L +SG++ DRI    G+     K  
Sbjct: 565 IKIEISGHTDDV---GSDTENMALSQRRAQSVQYYLQQSGIAADRILA-KGYGETTPKAP 620

Query: 324 SDP--MNSANRRID 335
           +D       NRRI+
Sbjct: 621 NDSDENRQKNRRIE 634


>gi|121605683|ref|YP_983012.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120594652|gb|ABM38091.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 210

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  P     L  +   +      + I  GHTD+         N +LS+ R+
Sbjct: 100 DAFFDFDKSVIKPAGKEKLDDLIGKIKDINLEVIIAVGHTDSV---GSDSYNQKLSVRRS 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 157 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTAEGRAKNRRVEIEVVGTR 207


>gi|108756980|ref|YP_628607.1| OmpA family protein [Myxococcus xanthus DK 1622]
 gi|108460860|gb|ABF86045.1| OmpA family protein [Myxococcus xanthus DK 1622]
          Length = 409

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 99/274 (36%), Gaps = 9/274 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              +   + L  A +         ++S Q+ +    +    +     +     Q ++  +
Sbjct: 122 AELDAARQQLAQAERERLQALQQQQQSRQHAVTQQQEAERMRMDAQRRQHEAEQLRRLAQ 181

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
            +         + +   + +  R   + +    + +  + + +         ++ ++   
Sbjct: 182 QQEAESRRLAEKTTRLQEEAQRRARAESESRRLAQENHELLQRSAELEAEQEARRQVERE 241

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             ++R   L  +  +T +    ++  + V       G+++++       +F  ++   LP
Sbjct: 242 LERERQARLDAEQRATEALTQLESTARDVKVREEERGLVLTM---SGQVLFASNAVDLLP 298

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
                L ++   L  S   + I GHTD+         N  LS  RA    + L+  GVS 
Sbjct: 299 TAREQLTEVAHALKVSDSPMVIEGHTDSM---GSDAMNEALSYRRAEHVREFLISQGVSR 355

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           DRI ++ G   +R    +        NRR++I++
Sbjct: 356 DRI-QVRGLGEYRPVANNSTPEGRANNRRVEIIL 388


>gi|146278244|ref|YP_001168403.1| hypothetical protein Rsph17025_2208 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556485|gb|ABP71098.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 525

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 16/297 (5%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +    A+        K        +   +    R++    + +      +  +  + G 
Sbjct: 232 SETELTAMTLALEEQRKRAEETLTLLAAARTDAARAATEAEERAAALAAAREVLASREGE 291

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
             +  +   L N       +Q                ++  +   L   +N         
Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLDAAQERDEENRVQLQSLGTQLNSALAQVAAE 351

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             +   L    + RL+   K +    S        + VL       I+       +  +F
Sbjct: 352 QKRRAELEEAERLRLEARNKDLERFRSEFFGQL--RQVLAGREGVRIVGDRFVFSSEVLF 409

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287
           +  S+    E    +  +   L+            +I + GHTD  P       RDNW L
Sbjct: 410 EPGSAQLASEGRTQISGVTRTLSEIREQIPEGIDWIIRVDGHTDDVPLSGFGAFRDNWEL 469

Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S  RA S  + + +  G    R+   +GF  +R  +        + NRRI++ + +R
Sbjct: 470 SSARALSVVRYMQQTLGFPPSRL-AATGFGEYRPVVEGSSPEARAQNRRIELKLTER 525


>gi|115358234|ref|YP_775372.1| hypothetical protein Bamb_3484 [Burkholderia ambifaria AMMD]
 gi|115283522|gb|ABI89038.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 432

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 10/167 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                + K+     +           +   L     +     V  +       ++    R
Sbjct: 269 SRSADVQKQIADIARMTPPPAPPQLHLKQLLQD---EIAAGTVSVDEDARHSAVTF---R 322

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
              MF    +        ++ KI   +A     ++I G+TD  P R+     N  LS +R
Sbjct: 323 GDAMFKPGGASVQASMNPLIAKIATEIAKVPGKVTIIGYTDKVPIRSRHFASNQVLSEER 382

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           A    Q+L  +GV  +R+  + G         +      + NRR++I
Sbjct: 383 ATQVMQMLQAAGVPANRLEAV-GKGDAHPVGDNRTAQGRAQNRRVEI 428


>gi|327404889|ref|YP_004345727.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320397|gb|AEA44889.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 688

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           V        I I          FD + +   PE+   ++++ +++       I I GHTD
Sbjct: 563 VNKVIELKNIAIGSKIALRNIFFDVNKATLRPESNAEMERLVQLMKDVPRLKIEISGHTD 622

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331
            +     A  N  LS  RA +    L+  G++ +R+    G+   +   +++  +    N
Sbjct: 623 NT---GSATLNETLSQQRAEAVVAYLVSKGIAANRMIA-KGYGSSQPIASNNSEDGKQQN 678

Query: 332 RRIDILVED 340
           RR +  ++ 
Sbjct: 679 RRTEFEIKG 687


>gi|294649621|ref|ZP_06727038.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292824498|gb|EFF83284.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 217

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  FD + S   P     L K+ +VL   +   I + G+TD +        N  LS  
Sbjct: 108 PGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILVTGYTDNT---GNDSINIPLSQA 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S    L   G++ +RI    G+        +        NRR++I +  +Q
Sbjct: 165 RAQSVKNYLAGKGIASNRIDA-QGYGSSNPIADNSTAAGREQNRRVEISIYAKQ 217


>gi|91787678|ref|YP_548630.1| OmpA/MotB [Polaromonas sp. JS666]
 gi|91696903|gb|ABE43732.1| OmpA/MotB [Polaromonas sp. JS666]
          Length = 214

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ R+
Sbjct: 103 DAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSV---GSDTYNQKLSVRRS 159

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 160 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTAEGRAKNRRVEIEVVGTR 210


>gi|78065049|ref|YP_367818.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77965794|gb|ABB07174.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 320

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 76/266 (28%), Gaps = 13/266 (4%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                          +    +       T     + +G     +  +         +   
Sbjct: 60  TGAAPGTASGAVVHGTAGTANTLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGA 119

Query: 139 QSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            +   +  +   +          K    +     +    +     E    +  + + Q L
Sbjct: 120 TNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQL 179

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A  +++TL+          V         ++       T  F+  S+   P+  ++L ++
Sbjct: 180 ASDMANTLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSATLTPQGRLILDQM 236

Query: 256 GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              LA        I GHTD          N  LS  RA +    L+   +   +++  +G
Sbjct: 237 AAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSILPQQMTT-TG 292

Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338
               +    +D     + NRRI+  V
Sbjct: 293 VGPDQPIAPNDTADGRARNRRIEFRV 318


>gi|221068229|ref|ZP_03544334.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
 gi|220713252|gb|EED68620.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
          Length = 215

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  P     L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 105 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSI---GSDAYNQKLSVRRA 161

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L+  G+ + R+    G    +   ++      + NRR++I V   +
Sbjct: 162 EAVKAYLVSKGIEKSRVYT-EGKGKKQPVASNATAAGRAQNRRVEIEVVGTK 212


>gi|50084108|ref|YP_045618.1| putative outer membrane protein [Acinetobacter sp. ADP1]
 gi|49530084|emb|CAG67796.1| putative outer membrane protein [Acinetobacter sp. ADP1]
          Length = 217

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  ++       FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLRQQMAGTGVEVNRNPDGSVGLVM--PGNITFDTNKSNIKPNFYSTLNKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI+   G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVANYLSGQGVSSSRINA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                 ++        NRR++I + +RQ
Sbjct: 190 SSNPIASNATAQGREQNRRVEISIYERQ 217


>gi|305432269|ref|ZP_07401432.1| fibronectin-binding protein [Campylobacter coli JV20]
 gi|304444617|gb|EFM37267.1| fibronectin-binding protein [Campylobacter coli JV20]
          Length = 332

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 229 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 285

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            + L K GV + RI  + G+   + + ++D       NRR++
Sbjct: 286 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKEGRADNRRVE 326


>gi|255594982|ref|XP_002536202.1| conserved hypothetical protein [Ricinus communis]
 gi|223520472|gb|EEF26178.1| conserved hypothetical protein [Ricinus communis]
          Length = 113

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            +F+ + S   P+    + ++  VL+ + + + + GHTD          N +LS  RA S
Sbjct: 1   VLFNFNESSLRPDAGPAIARVVVVLSRTQKPMIVEGHTDNV---GTREYNQQLSEARAKS 57

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
               L + G+S  RI+ + G+A  R    +D     + NRR +I+V+ 
Sbjct: 58  VANELERRGISASRITLV-GYAFDRPVADNDTPEGRARNRRTEIVVKG 104


>gi|197117764|ref|YP_002138191.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
 gi|197087124|gb|ACH38395.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
          Length = 468

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   +I  PE    + ++G  +       ++  GHTD          N  LS  RA
Sbjct: 234 HGEFDIDKAIIRPEYKEEIAQVGNFMKKYPTTTAVIEGHTDNV---GSYNHNQDLSQRRA 290

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
            +    L++  G+   R+S   G+   R    +        NRRI+ +++
Sbjct: 291 EAVVNYLVEQYGIERSRLSA-KGYGFTRPIADNATDEGKQKNRRIEAIID 339



 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 11/151 (7%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVL 252
                +        N     + +       ++  D+    +   FD   +    +    +
Sbjct: 317 RPIADNATDEGKQKNRRIEAIIDCAFDVQQVTPPDRLCMALVLDFDAGKADVKSQYRNEI 376

Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
            K+ + +       ++  GHTD +        N +LS  RA +    L+ + G+   R+S
Sbjct: 377 AKVADYMKRYNTTTAVIEGHTDNT---GSPEKNMKLSQQRAQNVVNYLVDNFGIERSRLS 433

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVE 339
              G+   R    ++       NRRI+ +++
Sbjct: 434 A-KGYGATRRISYNNTPEGRQKNRRINAVID 463


>gi|298386938|ref|ZP_06996492.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
 gi|298260088|gb|EFI02958.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
          Length = 280

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 19/217 (8%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             Q S   K  L   ++ G  + +   +  +   E+      LS++K    +R++ + +L
Sbjct: 49  GDQLSAQIKKLLRDTTQMGNSIRQYQSMLSTNMTEQEKLNALLSQKKNELSERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I++           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMINAQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           GV+  +I + SG   +     ++       NRR +I+
Sbjct: 226 GVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261


>gi|229163499|ref|ZP_04291450.1| OmpA/MotB domain protein [Bacillus cereus R309803]
 gi|228620068|gb|EEK76943.1| OmpA/MotB domain protein [Bacillus cereus R309803]
          Length = 233

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 84/207 (40%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+        +      +       K+   A  +++ + +L  
Sbjct: 24  KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSASSLESEKMKKNAEAEVKQQEMNELKA 83

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +  + +      + T  G+ ++I++     +FD   +    E++ + +++  
Sbjct: 84  VQKGIDKYIEENKLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLNIAKEMSN 140

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S + G
Sbjct: 141 LLVSTSPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-G 199

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 200 YGEYRSIAPNDTQEGKAKNRRVEVFIL 226


>gi|71066360|ref|YP_265087.1| OmpA/OmpF family outer membrane protein [Psychrobacter arcticus
           273-4]
 gi|71039345|gb|AAZ19653.1| outer membrane protein, OmpA/OmpF family [Psychrobacter arcticus
           273-4]
          Length = 217

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  ++    +  F    +         L K+  
Sbjct: 73  YMERQAKQLEQQMAGTGVTVTPNANGNIDLVM--PGSITFSFDDATLNNSFKPTLDKLAA 130

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +       I+I GHTD+   +     N +LS DRAY+    L   GV+ +RI+ +  + 
Sbjct: 131 TMNEYNQNTITIAGHTDS---KGTDAYNMKLSRDRAYAVANYLSARGVASNRIN-VVAYG 186

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
             R    ++       NRR+++ V   Q
Sbjct: 187 ESRPVADNNSEYGRQQNRRVELTVNAPQ 214


>gi|269967472|ref|ZP_06181529.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
 gi|269827913|gb|EEZ82190.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
          Length = 430

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +     +        A         L  +     +  E  +  + IS+  Q    +F+  
Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299
           S+  +     V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  + L
Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386

Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           + +   E R+    G    R  + +  D   + NRRI+I
Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424


>gi|260427879|ref|ZP_05781858.1| OmpA/MotB domain protein [Citreicella sp. SE45]
 gi|260422371|gb|EEX15622.1| OmpA/MotB domain protein [Citreicella sp. SE45]
          Length = 627

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 89/248 (35%), Gaps = 16/248 (6%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           +  + + G   Q+      +  +     S              +  +    +    +++ 
Sbjct: 381 SDTEGRAGEAEQRAGAAERQTELLNQQVSALRTQLSQLQGLLDDAKERDVDAQVQLQNLG 440

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            E N  L  ++ E+    + ++  +   +  +  L    ++   +       + G+ I  
Sbjct: 441 SELNAALARVAAEERRRRQLEEAERQRLEDQAKDLERYRSEFFGRLREVIGNQEGVRIEG 500

Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASP-- 276
                 +  +F    +       + + KI  +L +           +I + GHTD  P  
Sbjct: 501 DRFVFSSEVLFAPGEAELSRSGQMEIAKIASILRNVMADIPEGLDWIIRVDGHTDDIPLR 560

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                 DNW LS  RA S  + L+   G+  DR+S  +GF  ++    SD     + NRR
Sbjct: 561 PGARFSDNWELSQARALSVVRYLVDFLGIPPDRLSA-NGFGQYQPIDPSDTADARAQNRR 619

Query: 334 IDILVEDR 341
           I++ + +R
Sbjct: 620 IELKLTER 627


>gi|225382176|gb|ACN89316.1| hypothetical protein VEPGS_0610 [Vibrio alginolyticus]
          Length = 430

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +     +        A         L  +     +  E  +  + IS+  Q    +F+  
Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299
           S+  +     V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  + L
Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386

Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           + +   E R+    G    R  + +  D   + NRRI+I
Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424


>gi|91224571|ref|ZP_01259832.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
 gi|91190459|gb|EAS76727.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
          Length = 430

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +     +        A         L  +     +  E  +  + IS+  Q    +F+  
Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299
           S+  +     V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  + L
Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386

Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           + +   E R+    G    R  + +  D   + NRRI+I
Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424


>gi|89900364|ref|YP_522835.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89345101|gb|ABD69304.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 212

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ R+
Sbjct: 104 DAFFDFDKSVLKPEGKAKLDDLVGKVKDINLEVIIAVGHTDSV---GSNAYNQKLSVRRS 160

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 161 EAVKAYLVSKGIEKNRVYT-EGKGELQPVADNKTKEGRAKNRRVEIEVVGTR 211


>gi|317505336|ref|ZP_07963264.1| OmpA family protein [Prevotella salivae DSM 15606]
 gi|315663550|gb|EFV03289.1| OmpA family protein [Prevotella salivae DSM 15606]
          Length = 284

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 80/232 (34%), Gaps = 14/232 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           Q  + +   +     S  +Q    K               + +       +    +   +
Sbjct: 41  QNTKEELAASKARVASLEEQLAQQKKDFAALQGSLDKSLLNANANNINISKLVDQINESN 100

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++ K +   L   +++ L+  ++   +K V     +  + IS+ D     ++  
Sbjct: 101 QYIRHLVEVKSKSDSLNLVLTNNLTRSLSREEMKEVDVRVLKGVVYISLADNM---LYRS 157

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRA 292
            S          L KI +++    +    I G+TD  P    +      R+NW LS  RA
Sbjct: 158 GSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNIRNNWDLSALRA 217

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            S  Q L    GVS  R++   G   +     +D       NRR  I++  +
Sbjct: 218 SSVVQYLQDHFGVSPKRLTAG-GRGEYNPVATNDTELGKQRNRRTQIIITPK 268


>gi|262195177|ref|YP_003266386.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262078524|gb|ACY14493.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 490

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 18/288 (6%)

Query: 55  NATDDDTKKAIEQYF---NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
             TD +      + F    P    + T   GIFDE +      ++    + D+   +   
Sbjct: 184 GTTDLEVLLGFYKSFGVVPPPPPPMDTDGDGIFDESDQCPNEPEDMDGNADDDGCPEEEP 243

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
                         +  N    +      + C +             + +D  +  +   
Sbjct: 244 PADTDGDGMTDDVDQCPNEAEDVDGFSDEDGCPDLDNDGDGIPDASDQCSDSAEDPDGFA 303

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +    P        +                     A+    G          + +    
Sbjct: 304 DEDGCPDEDNDGDGIVDAADQC--------MNEPETANGYQDGDGCPDEIPEEVKNYTGS 355

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F  +S   LP +  VL +   +L    +  + I GH+D          N  LS  
Sbjct: 356 IEGIRFANNSDRILPVSRKVLDEAARILVEYPDLRVEISGHSDDR---GKRDFNIDLSKR 412

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           RA +    L+  GV + R+  + GF   R  + +  +   + NRR++ 
Sbjct: 413 RAEAVRVYLVGKGVEDSRLVSM-GFGPDRPLVENTSNANRAKNRRVEF 459


>gi|257458255|ref|ZP_05623405.1| OmpA family protein [Treponema vincentii ATCC 35580]
 gi|257444365|gb|EEV19458.1| OmpA family protein [Treponema vincentii ATCC 35580]
          Length = 436

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 12/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            K+ +          +    +   +     D   + +  +  +  I I++ D R    F 
Sbjct: 278 DKDTLQVSPTYPLADEQFYFMYRDIEKFFLDREPESITVKAPKNIIKITMYDIR----FV 333

Query: 239 KSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             S+  LP+    L  I E L          I GHT         R    LSL RA    
Sbjct: 334 ADSAEILPDETGRLDVIAEALKKVGPNTHFLIEGHTANLNRPEGER---ILSLQRADKIA 390

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           + L K G+   R+    G+   R    +D     + NRR++I +   
Sbjct: 391 EELAKRGIEASRMETA-GYGATRPIAPNDTAENRAKNRRVEITILRD 436


>gi|332879337|ref|ZP_08447034.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682757|gb|EGJ55657.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 422

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   S    E+   L ++   L  +   I ++GHTD          N +LS  RA +  
Sbjct: 321 FDFGKSTIKTESYAYLNRLANTLVRTHARIEVKGHTDNV---GTEEFNMKLSHKRAQAVV 377

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             L+  GV +D++   S +   +    +D       NRR++  +  
Sbjct: 378 DYLIGRGVDKDKL-SYSYYGMSKPLTTNDTEEGRTMNRRVEFEILK 422


>gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 454

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE    + K+G+ +       ++  GHTD       A  N  LS  RA S 
Sbjct: 223 FDIDKADIRPEYHDEVAKVGDFMKKYPTTTTVIEGHTDNV---GTAEYNMGLSQRRAESV 279

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L++  G+   R+S   G+   R    +        NRRI+ +++
Sbjct: 280 VNYLVEKFGIENSRLSA-KGYGLTRPVADNSTNEGKQLNRRIEAIID 325



 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   P+    + K+G+ +       + I GHTD       +  N +LS +RA + 
Sbjct: 347 FDTGKADIKPQYREEIAKVGDYMKKYPTTTAAIEGHTDNV---GGSEYNMKLSQERAENV 403

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+++ G+   R+S   G+   R    ++       NRRI+ +++
Sbjct: 404 VNYLVENFGIERSRLSA-KGYGFTRRIAYNNTAEGRQKNRRINAVID 449


>gi|315917803|ref|ZP_07914043.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691678|gb|EFS28513.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 204

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 65  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 121

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD +      + N  LS  RA S  Q L+  GV+ +R+    GF  +
Sbjct: 122 VQYPETQILVQGHTDNT---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLMS-QGFGPN 177

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +   +    NRR++I +  +
Sbjct: 178 NPVADNSTPDGRQMNRRVEIKIAPK 202


>gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01]
 gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01]
          Length = 318

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F  +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  R
Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S    L++ G+   RI    G   +    +++       NRR++++V
Sbjct: 262 AESVAHALVEKGIDASRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309


>gi|76809785|ref|YP_332623.1| ompA family protein [Burkholderia pseudomallei 1710b]
 gi|76579238|gb|ABA48713.1| ompA family protein [Burkholderia pseudomallei 1710b]
          Length = 316

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 204 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 260

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 261 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 313


>gi|66044564|ref|YP_234405.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63255271|gb|AAY36367.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 260

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        +        ++ +        +     +D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDEDVQKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250


>gi|149195189|ref|ZP_01872279.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
 gi|149134622|gb|EDM23108.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
          Length = 383

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S+   PE +  ++K  E L +  +    I+G+TD       A  N  LS  RA + 
Sbjct: 281 FDTNSAKIKPEYMPKIEKFAEFLKNHPDVKAEIQGYTDNR---GSATYNMILSEKRAKAV 337

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
           Y+ L+K GV++D+I+ + G+       ++D     + NRR+
Sbjct: 338 YEALLKLGVNKDQITFV-GYGEANPIASNDTPEGRAKNRRV 377


>gi|110638110|ref|YP_678319.1| OmpA family peptidoglycan-associated lipoprotein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280791|gb|ABG58977.1| peptidoglycan-associated lipoprotein, OmpA family [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 640

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                +    ++       + ++         FD   +   PE++  L K+ ++L H+  
Sbjct: 503 NFPKQDGYIELIDTICMNKLKVNTSIILRNVFFDVDKATLRPESVQELDKLVDILRHNPN 562

Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             I + GHTD+         N  LS +RA +    L+K  G++ +R+    G+   +   
Sbjct: 563 LKIELSGHTDSD---GNDDHNMVLSDNRAKAVVDYLIKKGGINPNRL-TWKGYGETKPIE 618

Query: 323 ASDPMN--SANRRIDILVEDRQ 342
            +D       NRR ++ +   +
Sbjct: 619 LNDTPEHKQQNRRTEVKILSNE 640


>gi|328958204|ref|YP_004375590.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
 gi|328674528|gb|AEB30574.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
          Length = 249

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 11/140 (7%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVI 266
            +   V       G+++S  D      FD  ++    +       IG++L         I
Sbjct: 105 ELNDSVTTSIEERGLVLSFNDAL---FFDSGNAEIKADQQNKFVDIGKLLNQPALKDSFI 161

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324
            + G+TD+ P  N     NW LS+ RA +  Q+++  SG++ +R+  + G+  +R K  +
Sbjct: 162 RVEGYTDSVPVSNPKYKSNWDLSVLRASNVAQIIINDSGINPNRV-SVVGYGEYRPKSDN 220

Query: 325 DPMNSA--NRRIDILVEDRQ 342
                   NRR+DIL+ + +
Sbjct: 221 KTNEGRVENRRVDILILNSE 240



 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          ++    ++ P N   W + YADF+T+LM FF++M+ ++  D      +   F+     + 
Sbjct: 3  RRNKKHEEEPENHERWLLSYADFITLLMIFFIIMYSMSEMDKSKYNELASVFS---MEMG 59

Query: 78 TASKGIFDEQNPPERSSQNKI 98
              GI + ++       +K 
Sbjct: 60 GGGTGILEGESKSGDGENSKG 80


>gi|154147928|ref|YP_001407122.1| outer membrane fibronectin-binding protein [Campylobacter hominis
           ATCC BAA-381]
 gi|153803937|gb|ABS50944.1| outer membrane fibronectin-binding protein [Campylobacter hominis
           ATCC BAA-381]
          Length = 333

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 10/124 (8%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           V+ +      +I +    N   F   S+   P+    L+K+  ++    E    + G+TD
Sbjct: 212 VVVDEFGCEKVIRLDLGVN---FAFDSAEISPKYYSELEKVSSIMKEHAEYSVRLEGNTD 268

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
           +         N +LS  RA +  + L+K GV  ++I+ + G         +D     + N
Sbjct: 269 SI---GKEAYNQKLSERRANAVSKALVKLGVPAEKITTV-GLGEKNPVATNDTAEGRAQN 324

Query: 332 RRID 335
           RR+D
Sbjct: 325 RRVD 328


>gi|224370727|ref|YP_002604891.1| MotB3 [Desulfobacterium autotrophicum HRM2]
 gi|223693444|gb|ACN16727.1| MotB3 [Desulfobacterium autotrophicum HRM2]
          Length = 272

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 92/254 (36%), Gaps = 7/254 (2%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
           ++  +     ++    ++         + +     N+ +   + +      S +      
Sbjct: 4   ESNGNSGSKNNLNNTPLNGGGREGVSGQGFDPFSENLLFSFETPRRGGWSVSWSDLMMTM 63

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
             L     + ++ ++E  +   P +     +   K     L    S   +      + + 
Sbjct: 64  FILFVVMYVYQAGSRELEFGPGPGTNLVSDSGSGKIVENSLNASPSDVFTQTRQAVLDEF 123

Query: 215 VLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           V    +   +      I       FD   +   P+    L++IG +L  ++ V+++ GHT
Sbjct: 124 VDDSASVELVADRAVRISLAGDLFFDLGKADLKPQAQWRLRQIGRILQENSFVVNVIGHT 183

Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--N 328
           D  P  +     NW LS  RA    + L+K   + E+R   +SG A  +    ++     
Sbjct: 184 DDMPNHSEQYPTNWELSTARACRVARFLIKEAQLPEERFF-VSGHAWLQPLRPNNTAHNR 242

Query: 329 SANRRIDILVEDRQ 342
           S NRR++I++   +
Sbjct: 243 SLNRRVEIVLMKER 256


>gi|227540121|ref|ZP_03970170.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771844|ref|ZP_07081715.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|227239982|gb|EEI89997.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300761230|gb|EFK58055.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 173

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +SS    ++   L K+ ++L  +    I + GHTDA+        N  LS  R
Sbjct: 65  SDFLFPTNSSYLTDKSKGELSKLAKLLKDNSKTKIRVDGHTDAT---GTPEYNLWLSDKR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A S  + L+ SG+SE RI+   G    +    +        NRR+++++ +++
Sbjct: 122 AVSVKKFLVDSGISESRITT-KGIGQAKPVADNKTPEGRQMNRRVEVVLLNQK 173


>gi|325269589|ref|ZP_08136204.1| OmpA family protein [Prevotella multiformis DSM 16608]
 gi|324988067|gb|EGC20035.1| OmpA family protein [Prevotella multiformis DSM 16608]
          Length = 289

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 85/238 (35%), Gaps = 14/238 (5%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           ++ +  Q  +     NN    S   Q    + S         +  ++ +       +   
Sbjct: 38  QLSADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINISKLVD 97

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ D   
Sbjct: 98  QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM- 156

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWR 286
             ++   S          L KI +++    +    I G+TD  P           R+NW 
Sbjct: 157 --LYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIRNNWD 214

Query: 287 LSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS  RA S  Q L    GV+  R++   G   +     +D       NRR  I++  +
Sbjct: 215 LSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 271


>gi|330814655|ref|YP_004362830.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           gladioli BSR3]
 gi|327374647|gb|AEA65998.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           gladioli BSR3]
          Length = 420

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF             ++ KI   +      
Sbjct: 287 LKDEIAAGTVSVDEDARHSAVTF---RGDAMFPPGGVTIKSAMAPLVAKIAGEIVKVPGK 343

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +S+ G+TD  P R+     N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 344 VSVLGYTDNLPIRSRQFPSNEALSEERATQVLQMLQAAGVPANRLEAV-GKGDADPIGDN 402

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I+V
Sbjct: 403 RTAQGRAQNRRVEIVV 418


>gi|292489492|ref|YP_003532380.1| putative type VI secretion system core protein [Erwinia amylovora
           CFBP1430]
 gi|292898296|ref|YP_003537665.1| outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291198144|emb|CBJ45249.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291554927|emb|CBA22885.1| putative type VI secretion system, core protein [Erwinia amylovora
           CFBP1430]
 gi|312173666|emb|CBX81920.1| putative type VI secretion system, core protein [Erwinia amylovora
           ATCC BAA-2158]
          Length = 413

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285
           S++  +   +F  +S+        VL ++   +   +  I + G++D  P R+     N+
Sbjct: 282 SVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNSVSGRILVVGYSDNVPIRSARFASNY 341

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
            LSL RA S  + L +      R+    G         ++     + NRR++I +    G
Sbjct: 342 ELSLARAQSVSEQLQQHLTQPQRVKA-EGRGESNPLAPNNSAGNRARNRRVEITLLVSPG 400


>gi|288925232|ref|ZP_06419167.1| OmpA family protein [Prevotella buccae D17]
 gi|288337997|gb|EFC76348.1| OmpA family protein [Prevotella buccae D17]
          Length = 284

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           Q  + Q    N    S   Q    K       E       + +       +    +   +
Sbjct: 42  QDAKEQLAAANARVASLEDQLAQQKRDYASLQEMLDKSLVNANSNNINISKLVDQINESN 101

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++  
Sbjct: 102 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKS 158

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA------RDNWRLSLDRA 292
            S          L KI +++    +  + I G+TD  P    +      R+NW LS  RA
Sbjct: 159 GSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNIRNNWDLSALRA 218

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            S  Q L  + GV   R++   G   +     +        NRR  I++  +
Sbjct: 219 SSVVQYLQNRYGVDPKRLTAG-GRGEYNPVATNSTELGKQRNRRTQIIITPK 269


>gi|317049660|ref|YP_004117308.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
 gi|316951277|gb|ADU70752.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
          Length = 528

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 6/115 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285
           +I    +  +FD   +   P +  +L K    +      + +  GHTD +        N 
Sbjct: 389 TIAQLDSLALFDSGKAELKPGSTKMLIKALVGIRAKPGWLIVISGHTDNT---GDPAFNQ 445

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +LSL RA +    +  +G   +    + G+   R  + +D       NRR+DI +
Sbjct: 446 QLSLQRAEAVRNWMRDTGAIAESCFAVQGYGVSRPLVTNDTPEGRATNRRVDIRL 500


>gi|312889185|ref|ZP_07748742.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311298347|gb|EFQ75459.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 286

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 9/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             L   +++ L+  ++ +  K V  +  +  + IS+ D     ++   S     +    L
Sbjct: 121 DSLNMVLTNNLTRSLSADESKDVNVKVLKGVVYISLSDNM---LYKSGSYEISEKAGATL 177

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
            KI +++         I G+TD  P      R+NW LS  RA S  Q L  + GV   R+
Sbjct: 178 AKIAKIITDYKGYDVLIEGNTDNLPISKPNIRNNWDLSALRASSVVQSLQNNYGVEPKRL 237

Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +   G   +     +   +  + NRR  I++  +
Sbjct: 238 TAG-GRGEYNPVADNSTESGKAQNRRTQIIITPK 270


>gi|264677568|ref|YP_003277474.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|262208080|gb|ACY32178.1| OmpA/MotB [Comamonas testosteroni CNB-2]
          Length = 214

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  P     L  +   +      + I  GHTD+         N +LS+ RA
Sbjct: 104 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSI---GSDAYNQKLSVRRA 160

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L+  G+ + R+    G    +    +      + NRR++I V   +
Sbjct: 161 EAVKAYLVSKGIEKSRVYT-EGKGKKQPVADNKTAAGRAQNRRVEIEVVGTK 211


>gi|311109539|ref|YP_003982392.1| type VI secretion system OmpA/MotB family protein [Achromobacter
           xylosoxidans A8]
 gi|310764228|gb|ADP19677.1| type VI secretion system OmpA/MotB family protein [Achromobacter
           xylosoxidans A8]
          Length = 425

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 7/178 (3%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             +  + +     ++K +   ++                  L  +   + V         
Sbjct: 240 WRLGSQSDAVFASIAKLRPPTVQIAPTAVKRPAPAPRLAVFLAPEIRDQLVSVRDEVDRS 299

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283
           ++ +   R   +F+  +S    + + VL ++ + L  +   I +RG++D +P R+     
Sbjct: 300 VVVL---RGDGVFESGASSVRDQYLPVLSRVADALRETQGSILVRGYSDNTPMRSARFPS 356

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           NW LS  RA +   +L +      R+ +  G         +D       NRR++I V 
Sbjct: 357 NWHLSQARADAVKDMLEQRLGQTARV-RAEGRGDADPVAPNDTAAGRALNRRVEITVL 413


>gi|262065804|ref|ZP_06025416.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
 gi|291380509|gb|EFE88027.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
          Length = 171

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 5/154 (3%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L  L        +  +    +K +          ++I+       FD   S+  P+  
Sbjct: 21  PTLAALTTTQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYF 80

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L  + + +  +   +++ GHTD+       + N  LS  RA +    L++ G++E+RI
Sbjct: 81  EMLNNLKDFIEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERI 137

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             I           ++       NRR++  +  R
Sbjct: 138 VGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 171


>gi|108759406|ref|YP_634375.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463286|gb|ABF88471.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 538

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   F    S         L  I + L  +  V   I GHTD +        N  LS D
Sbjct: 428 EHHVQFPVGQSTLSDSERRNLDAIADYLKANPGVSLRIEGHTDNT---GPEELNRTLSQD 484

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           RA +  Q L++ G+   R++   G+   +   ++D       NRR++ +
Sbjct: 485 RADAVRQYLIQQGIESSRLTA-KGYGPAQPIASNDTPEGRSANRRVEFV 532


>gi|284039059|ref|YP_003388989.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283818352|gb|ADB40190.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 427

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 13/275 (4%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           FN +G +++   K  + ++ PP +  Q              +  L   +T    Q + L 
Sbjct: 158 FNFWGVHIINPRKDSYSQRKPPVQPRQQPPRTVPRPQPEPPTEQLPPDNTPVPVQPKVLP 217

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  N    +         +   + +  +                       +  + 
Sbjct: 218 APATVAINGITRDAKTKQPITATVTYRLISGAEASGDEPADSLQSGSLTGKYRIEIDRRG 277

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLP 246
              +   AK   S    LV +     V        + I    +       F+ S     P
Sbjct: 278 VYAVTASAKGYFSQSDTLVTN----RVDVARDFNLVPIEAGAKITLKNIYFNVSKYDLKP 333

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           E+   L ++  V+  +  +   + GHTD          N  LS +R     + L+  G+S
Sbjct: 334 ESYPELDRLVTVMRSNPTMQIRLEGHTDTV---GEFDANVELSRNRVNEVKRYLVDKGIS 390

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             RI  + G+   R    +        NRR+++++
Sbjct: 391 ASRIETV-GYGPSRPINTNKSLKERPENRRVEMVI 424


>gi|224540643|ref|ZP_03681182.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517715|gb|EEF86820.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 299

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 9/164 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +  K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S 
Sbjct: 119 KQLVDAKSKSDSLNVMLTNNLTRSLSREELKEVDVKVLKGVVYISLADNM---LYKSGSY 175

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300
                    L KI +++    +  + + G+TD  P  R   R+NW LS  RA S  Q L 
Sbjct: 176 EINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRTNIRNNWDLSALRASSVVQELQ 235

Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            K GV   R+S   G   +     +D       NRR  I+V  R
Sbjct: 236 NKYGVDPKRLSAA-GRGEYNPITDNDSELGKQRNRRTQIIVTPR 278


>gi|317064862|ref|ZP_07929347.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
 gi|313690538|gb|EFS27373.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
          Length = 211

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L        V        + +++        F   SS  +      L  I  VL
Sbjct: 72  DRQEQELRERLKNTEVQVSQNGDNLNLNL---PGGVTFATDSSNIVSSFYGPLNSIATVL 128

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E  I + G+TD       A  N  LS  RA S    L++ GVS  RIS + G+   
Sbjct: 129 VQYPETRIIVNGYTDNV---GSASYNVSLSERRAASVRNYLIQQGVSARRISYV-GYGME 184

Query: 319 RLKIASDPM--NSANRRIDILVE 339
             +  +      + NRR+++ + 
Sbjct: 185 NPRATNSTAAGRAENRRVELEIL 207


>gi|315122279|ref|YP_004062768.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495681|gb|ADR52280.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 126

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 69/114 (60%), Positives = 84/114 (73%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           MN   D +Q+ +QFI IKKKV +D     LGSWKIVYADFMT LM+FFLVMWI+NATDD+
Sbjct: 1   MNYQKDNDQKKNQFIFIKKKVVVDLEKKKLGSWKIVYADFMTALMSFFLVMWIVNATDDN 60

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           TKK IE YFNPFG NL+ ASKGIF++ N P    +N I+  ID+  T N+ +LK
Sbjct: 61  TKKVIENYFNPFGPNLLMASKGIFEKNNSPNNFPKNSINQPIDKKTTNNNFNLK 114


>gi|312962530|ref|ZP_07777021.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311283457|gb|EFQ62047.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 271

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 94/251 (37%), Gaps = 21/251 (8%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            +  + +  +       Q  + + N+  ++        ++    D         +  +  
Sbjct: 23  ASHPNGEQALQQAGSDFQKVKEDANVLRIAPKDVIRAGESLARADRLSSYWGSGADVVHY 82

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA----------DNIVKGV 215
           +   +    +     E+ L  +R  +L+   +++   L               +  +  +
Sbjct: 83  AYLSQRYSAIAREHTEQALNEERAAKLELERQRLQLALRESKLISVQQQGKWLEEQIASL 142

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDA 274
               T  G+++++ D     +FD   +         + KI + L  +   V+ I G+ D 
Sbjct: 143 TTTQTDRGLVMTLGD----VLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYADN 198

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           +      ++N +LS DRA S   VL+  G+ E RI ++ G+       A+      + NR
Sbjct: 199 T---GGQQENLKLSRDRAQSVADVLVDLGIDEKRI-QVEGYGDQYPVEANASERGRAQNR 254

Query: 333 RIDILVEDRQG 343
           R++I+  D +G
Sbjct: 255 RVEIVFSDEKG 265


>gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
 gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
           AND4]
          Length = 315

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
             T  F  +S+   PE+   L  +   L    +  + + G+TD       A  N ++S  
Sbjct: 201 MGTGSFALNSTTLKPESASKLDDLVAFLNEYPQATVGVIGYTDT---SGPAAYNQKVSEK 257

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    L++ G+   RI    G   +    +++       NRR++++V
Sbjct: 258 RAESVANALVEKGIDASRIQA-RGEGENNPIASNETREGREQNRRVEVVV 306


>gi|317059511|ref|ZP_07923996.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
 gi|313685187|gb|EFS22022.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
          Length = 204

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 65  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 121

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD++      + N  LS  RA S    L+  GV+ +R+    GF  +
Sbjct: 122 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKHYLIGQGVASNRLMS-QGFGPN 177

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +   +    NRR++I +  +
Sbjct: 178 NPVADNSTPDGRQMNRRVEIKIAPK 202


>gi|312892040|ref|ZP_07751540.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311295412|gb|EFQ72581.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 460

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + V    T     + + D      FD   +     ++  L K+ E+L +    + + GH
Sbjct: 336 AENVKVYITEEDKRV-VKDAIANLEFDLGKATIRAHSLPSLDKVAELLVNKNFSLKLAGH 394

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD       A  N RLS +RA +    L+  G +  RI   +G+  ++   ++       
Sbjct: 395 TDN---SGSAALNMRLSKERAEAIKTYLVSKGANASRIEA-TGYGMNQPIASNKTAAGRQ 450

Query: 331 -NRRIDILV 338
            NRR++  +
Sbjct: 451 QNRRVEFTL 459


>gi|237800117|ref|ZP_04588578.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022973|gb|EGI03030.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 260

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E        ++ +    +   +     +D  K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLDKADKAFRDSEDAQKVDQLAY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLDA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLASFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250


>gi|229592075|ref|YP_002874194.1| hypothetical protein PFLU4673 [Pseudomonas fluorescens SBW25]
 gi|229363941|emb|CAY51462.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
          Length = 271

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 90/247 (36%), Gaps = 13/247 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            +  + +  +       Q  + + N+  ++        ++    D         +  +  
Sbjct: 23  ASHPNGEQALQQAGSDFQKVKEDANVLRIAPKDVIRAGESLARADRLSSYWGSGADVVHY 82

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGI 224
           +   +    +     E+ L  +R  +L+   +++   L          +G   E     +
Sbjct: 83  AYLSQRYSAIAREHTEQALNEERGAKLELERQRLQLALRESKLISVQQQGKWLEEQIASL 142

Query: 225 LISIIDQ-----RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
             +  D+         +FD   +         + KI + L  +   V+ I G+ D +   
Sbjct: 143 ATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYADNT--- 199

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              R+N +LS DRA S   VL+  G+ E RI ++ G+       A+      + NRR++I
Sbjct: 200 GGERENLKLSRDRAQSVADVLVDLGIDEKRI-QVEGYGDQYPVEANASERGRAQNRRVEI 258

Query: 337 LVEDRQG 343
           +  D +G
Sbjct: 259 VFSDAKG 265


>gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
           [Geobacter metallireducens GS-15]
 gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens
           GS-15]
          Length = 447

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE    ++++ + L    +  ++  GHTD+   +   + N +LS  RA + 
Sbjct: 338 FDFDKANIKPEFRDEIKRVADFLKEYPDATAVIEGHTDS---KGTVKYNQKLSERRAKAV 394

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            + L+   G+S  R+S   G+   +    +        NRR+
Sbjct: 395 MKNLVDEFGISAKRLSA-KGYGETKPVADNATEEGRQKNRRV 435


>gi|163942243|ref|YP_001647127.1| flagellar motor protein MotB [Bacillus weihenstephanensis KBAB4]
 gi|163864440|gb|ABY45499.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
          Length = 261

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+       ++      +       K+   A  +K+ + +L  
Sbjct: 52  KQMAVAFRSELAGGTGNKEFLSDQKPKEEKELSASSLESEKIKKDAEAEVKKQEMNELKA 111

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +    +      + T  G++++I++     +FD   +    E++ + +++  
Sbjct: 112 VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 168

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S + G
Sbjct: 169 LLVSASPREITVSGHTDNVPISNAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-G 227

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 228 YGEYRSIAPNDTPEGKAKNRRVEVFIL 254


>gi|218673547|ref|ZP_03523216.1| outer membrane lipoprotein [Rhizobium etli GR56]
          Length = 180

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L A     G+        I++++        FD       P     L  + 
Sbjct: 37  NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 93

Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL   +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF
Sbjct: 94  IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 149

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
              +   ++      + NRR++I +
Sbjct: 150 GPSQPVASNASEAGRAQNRRVEIQI 174


>gi|161520469|ref|YP_001583896.1| hypothetical protein Bmul_3921 [Burkholderia multivorans ATCC
           17616]
 gi|160344519|gb|ABX17604.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 431

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +      +++    R   MF    +        ++ KI   +A     
Sbjct: 298 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 354

Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R      N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 355 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 413

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 414 RTAQGRAQNRRVEI 427


>gi|88802157|ref|ZP_01117685.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
 gi|88782815|gb|EAR13992.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
          Length = 278

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 14/211 (6%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E     L  D +      ++  +    + +    +     EK   +   +        I+
Sbjct: 59  EERVKYLQDDKKNALKQVENLTVLTQSSSDNIKTVIAQLSEKDKYINGVREAMTQKDSIN 118

Query: 201 STLSGLVADNIVK-----GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             +   +  N+ +      +     +T + ISI D+    +F   S        VVL+KI
Sbjct: 119 LAIKYHLTKNLTEGIQDKDIEVNVEKTVVFISISDKL---LFKSGSYNVTDGAYVVLEKI 175

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312
            +V+    E+ + I GHTD+SP +    +DNW LS  RA +  ++L  K GV  +R+   
Sbjct: 176 AKVINDQPEMEVMIEGHTDSSPIKREIIQDNWDLSALRATAITRILQYKFGVQPNRLIAA 235

Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +  + +     +D     S NRR  I++  R
Sbjct: 236 A-RSQYVPLAPNDTAENKSKNRRTKIIIMPR 265


>gi|116688507|ref|YP_834130.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|116646596|gb|ABK07237.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 316

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 17/286 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124
             +    G  +     G       P+ +           H T  +       +T  +   
Sbjct: 33  AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAPPPANATPGQVVV 92

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                +    +   Q        T   ++ +    +T    S N ++          K  
Sbjct: 93  GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235
                 +++   +  +      +A ++   +    T + G+ +S  +Q          T 
Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F+  S+   P+  ++L ++   LA        I GHTD          N  LS  RA +
Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
               L+   +   +++  +G    +    +D     + NRRI+  V
Sbjct: 270 VKGYLITKSIPPQQMTT-TGVGPDQPIAPNDMADGRARNRRIEFRV 314


>gi|319791244|ref|YP_004152884.1| type IV / vi secretion system protein, dotu family [Variovorax
           paradoxus EPS]
 gi|315593707|gb|ADU34773.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus EPS]
          Length = 454

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
           S++  R    F   S+ P+  ++ VL++IG+ LA     + I GH+D  P R+     NW
Sbjct: 316 SVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGDVLITGHSDNQPIRSLRYPSNW 375

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            LS  RA +    L    V   R+    G A      A+D     + NRR+DI++ 
Sbjct: 376 HLSAARADAVKGALTTL-VDPARMRS-DGKADAEPVAANDTPANRARNRRVDIVLL 429


>gi|74055057|gb|AAZ95862.1| PomB [Aeromonas hydrophila]
          Length = 303

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 7/180 (3%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           ++  + +  E+  LP  S   I  +  K+    LAK  +     +        V      
Sbjct: 80  EVSAAPSVLESALLPSPSLAPISGVPIKQDGMTLAKIDTQLKESMGTLVDAGVVKLTLDD 139

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280
             + + +    +  +F   S+        VL  + ++L      + +RG+TD     N  
Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNADPVLNTLSDILKPVDNYVRVRGYTDNQQINNEI 196

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            R NW LS  RA +   VL+  G++  R+     +        +D       NR++ + +
Sbjct: 197 FRSNWTLSAARAEAVLTVLIAKGIAPQRL-AYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255



 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + K+         +L  W + YAD+MT++ A F+V++ +   + D  +A+          
Sbjct: 1   MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +   S G+ + Q     +++     S+ E     S  L   S    KQ       I    
Sbjct: 61  MQPRSDGLLEGQGKSLLNNEVSAAPSVLESALLPSPSLAPISGVPIKQDGMTLAKIDTQL 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158
                      + + +     L 
Sbjct: 121 KESMGTLVDAGVVKLTLDDNWLT 143


>gi|226944423|ref|YP_002799496.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
 gi|226719350|gb|ACO78521.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
          Length = 351

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 8/129 (6%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                    +  ++       FD   +    E+   ++ + + +    +   ++ GHTD+
Sbjct: 224 TVNAEGCTAVAEVVRVELDVKFDFDKAQVKEESYADIKNLADFMKQYPQTNTTVEGHTDS 283

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
                    N +LS  RA +   VL+ + GV   R+  + G+   R    +      + N
Sbjct: 284 V---GTDAYNQKLSERRANAVRDVLVNEYGVQGSRVDSV-GYGESRPVADNATESGRAIN 339

Query: 332 RRIDILVED 340
           RR++  VE 
Sbjct: 340 RRVEAEVEA 348


>gi|302035652|ref|YP_003795974.1| putative OmpA/MotB family outer membrane protein [Candidatus
           Nitrospira defluvii]
 gi|300603716|emb|CBK40047.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
           Nitrospira defluvii]
          Length = 400

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 97/291 (33%), Gaps = 14/291 (4%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
               D  ++   +             +     Q    +   +  D  +           +
Sbjct: 115 GQLSDAERQLSAKDQELAALRSGVGDRDRLAAQLAALQGQLSSKDQELAGLKGNAGDRDR 174

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + S   + + +  +      +NS +    KN+     +   DL  +      +  E    
Sbjct: 175 LSSELAQAKQRITQLEQQLEANSHELAGLKNAAGDREKLVADLAAARQRASDLENEIGRR 234

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              ++  K    ++K  L +    +S  L   VA   V         T      +    T
Sbjct: 235 DQEMTALKGALDQQKTSLAEAKDDLSKLLQAEVAKGNVTMKQLGDQLT------LGLATT 288

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSL 289
            +FD   +   P    VL +IG VL    +  I + GHTD  P +         N  LS 
Sbjct: 289 LLFDSGEATLKPGGADVLHRIGGVLKQYPDRSIHVAGHTDNVPIKGRLAKTYPTNVELSQ 348

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA SA Q L + G++ D+I    G A  R   ++        NRR++I+V
Sbjct: 349 ARAESARQALTEGGMAPDKIEA-KGHADSRPMASNSTAEGRQKNRRVEIVV 398


>gi|88706015|ref|ZP_01103723.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
 gi|88699729|gb|EAQ96840.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
          Length = 216

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 28/172 (16%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---- 232
            L+K+  LA   +++ Q   + +   L+G +A                 I+I D R    
Sbjct: 43  ELAKDLELAEAEREQAQARRQVLEEALAGPLASG--------------RITINDGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S     E   +L  + +     L  + +++ I G TD  P +      +DNW
Sbjct: 89  GSVLFALNSDRLQDEGRELLATLADPLNVFLKENDQLLMISGFTDDLPIQAGNLSFKDNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
            LS  RA +  + L+ +G+  DR+   + F   +    +  +   + NRR++
Sbjct: 149 ELSAQRALTVTRELVAAGLPADRVFAAA-FGDQQPVAPNRDESGRALNRRVE 199


>gi|115350445|ref|YP_772284.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115280433|gb|ABI85950.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 316

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 80/256 (31%), Gaps = 18/256 (7%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR---- 149
               +       I     +   G      +          L   + +    N + +    
Sbjct: 66  GSGTVVHGTAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVG 125

Query: 150 ----DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                     ++ K    +     +    +     E    +  + + Q LA  +++TL+ 
Sbjct: 126 DVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNP 185

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
                I  G+    +  G+L   +  R    F+  S+   P+   +L ++   L+     
Sbjct: 186 TYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNR 242

Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
              I GHTD          N  LS  RA +    L+   +   +++  +G    +    +
Sbjct: 243 TVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPN 298

Query: 325 DPM--NSANRRIDILV 338
           D     + NRRI+  V
Sbjct: 299 DTADGRARNRRIEFRV 314


>gi|300770792|ref|ZP_07080670.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762349|gb|EFK59167.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 438

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 14/214 (6%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           S    S     +   +    K      + E  +                L       + +
Sbjct: 228 SKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNADLKDDDGDGVAN 287

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246
              K  +T SG   D     +    T+    I + ++    +        FD   S    
Sbjct: 288 KYDKCPNTPSGTKVDGAGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKSTIRS 347

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +   L ++  +L      + + GHTD +      + N RLS +RA +    L   G + 
Sbjct: 348 TSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGKGANP 404

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RI   +G+  ++   ++        NRR++  +
Sbjct: 405 SRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 437


>gi|294638308|ref|ZP_06716561.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
 gi|291088561|gb|EFE21122.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
          Length = 219

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+  RI  I G  
Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALITQGVAAGRIRTI-GMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAAGKAQNRRVEITL 216


>gi|27378711|ref|NP_770240.1| hypothetical protein blr3600 [Bradyrhizobium japonicum USDA 110]
 gi|27351860|dbj|BAC48865.1| blr3600 [Bradyrhizobium japonicum USDA 110]
          Length = 508

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 7/152 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           D   ++    + L  +N    +  + T + I+I + D     +F    +  L     +  
Sbjct: 361 DRITQLQRIRNALAKENTACAMTADQTPSFIVIRVCD---LALFASGQATILDGFKPIAL 417

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++   L      I + GHTD+SP R      N+ LS++RA +    L        R+  +
Sbjct: 418 RVAATLDKEPGRIRVVGHTDSSPIRTVRFPTNFELSVERAKAVAAALKPGLTDGSRVD-V 476

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            G        ++      + NRR++I +E  +
Sbjct: 477 EGKGADAPIASNTTPEGRAKNRRVEIFIERSE 508


>gi|323495404|ref|ZP_08100481.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
 gi|323310327|gb|EGA63514.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
          Length = 324

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+ +S+   PE+   L ++ E L    +  + + G+TD+      A  N  +S  R
Sbjct: 211 GTGSFELNSTQLKPESASQLDELVEFLNTYPQAKVEVIGYTDS---SGAAEYNQVVSEKR 267

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L + G+   RI+   G   +    ++D       NRR++++V
Sbjct: 268 AESVASTLEQKGIDASRITA-RGEGENNPVASNDTREGRQQNRRVEVIV 315


>gi|257466649|ref|ZP_05630960.1| Outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 217

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 78  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD +      + N  LS  RA S  Q L+  GV+ +R+    GF  +
Sbjct: 135 VQYPETQILVQGHTDNT---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLMS-QGFGPN 190

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +   +    NRR++I +  +
Sbjct: 191 NPVADNSTPDGRQMNRRVEIKIAPK 215


>gi|189353340|ref|YP_001948967.1| hypothetical protein BMULJ_04580 [Burkholderia multivorans ATCC
           17616]
 gi|189337362|dbj|BAG46431.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
          Length = 432

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +      +++    R   MF    +        ++ KI   +A     
Sbjct: 299 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 355

Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R      N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 356 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 414

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 415 RTAQGRAQNRRVEI 428


>gi|256028784|ref|ZP_05442618.1| Outer membrane protein [Fusobacterium sp. D11]
          Length = 191

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q L        S  +    +K +    +     ++I+    +  FD   SI   +   
Sbjct: 26  AVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNFDFDKSIVKAQYFD 85

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L+ I E +  +   I+I GHTD+       + N+ LS  RA +    L++ G++EDRI 
Sbjct: 86  LLKNIKEFVEQNNYEITIVGHTDSI---GSNQYNFGLSRRRAEAVKAKLLEFGLAEDRIV 142

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            I      +    +      + NRR++  +  R+
Sbjct: 143 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 176


>gi|146281895|ref|YP_001172048.1| outer membrane protein [Pseudomonas stutzeri A1501]
 gi|145570100|gb|ABP79206.1| outer membrane protein [Pseudomonas stutzeri A1501]
          Length = 212

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   ++   +Q + + +    +  ++  GHTD+         N RLS  RA + 
Sbjct: 107 FDFDRDVVKQDSYSDIQNLADFMKEYRQTTTVLEGHTDSV---GTDAYNQRLSERRANAV 163

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +VL+   GV  +R++ + G+   R    +        NRR++  VE R 
Sbjct: 164 RRVLVDELGVEGNRVNAV-GYGESRPVADNSTEEGRAINRRVEAEVEARP 212


>gi|154685777|ref|YP_001420938.1| flagellar motor protein MotB [Bacillus amyloliquefaciens FZB42]
 gi|154351628|gb|ABS73707.1| MotB [Bacillus amyloliquefaciens FZB42]
          Length = 261

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T  +   +    +    +    ++        KE+    +     ++L          + 
Sbjct: 59  TGGTGVLEYSSVTPPENEKDGVDQLKKDKEKDKEQKKKEREAADREELEGVQKQVNQFIK 118

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266
              +   +  + T+ G+LI+I D      FD   +    E I + ++I  +L  +    I
Sbjct: 119 NKKLETQLETKLTKEGLLITIKDS---IFFDSGRADIRQEDIPLAKEISNLLVLNPPRNI 175

Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
            I GHTD  P +N     NW LS+ RA +   +L ++   + ++    GF  ++  +++ 
Sbjct: 176 IISGHTDNVPIKNSQYQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAVSNK 235

Query: 326 PMNSA--NRRIDILVEDRQ 342
                  NRR+++L++ R 
Sbjct: 236 TAEGRSKNRRVEVLIQPRN 254



 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          + +KK    D  +   SW I YAD +T+L+A F+V++ +++ D    + + + FN     
Sbjct: 1  MARKKKKKHDDEHVDESWLIPYADLLTLLLALFIVLFAMSSVDAAKFQMLSKSFNAVF-- 58

Query: 76 LMTASKGIFDEQNPPERSSQNKI 98
            T   G+ +  +     ++   
Sbjct: 59 --TGGTGVLEYSSVTPPENEKDG 79


>gi|115375599|ref|ZP_01462856.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|310823174|ref|YP_003955532.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115367375|gb|EAU66353.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|309396246|gb|ADO73705.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 468

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 75/265 (28%), Gaps = 15/265 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G  DE   PE  + +   +   +        L+        +     N+       +  
Sbjct: 213 DGFQDEDGCPELDNDSDGIVDSADKCPNELGPLQNLGCPIVDKDGDGINDPQDKCPDEPE 272

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +        D     D       +                       R   +  L     
Sbjct: 273 DKDGFQ-DEDGCPDLDNDADGVPDGQDKCPLEAGPAENGGCPDSDKDRDGIVDRLDACPE 331

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVL 259
                       K  +    +  I I     +    F   S+     +++ +L+ I  VL
Sbjct: 332 EPGVPEEKGCAKKYKMVVVKKDRIEI-----KKQINFGTGSAKIVGAQSLAILKDIALVL 386

Query: 260 AHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                 + + I GHTD+         N RLS  RA +    L+K G+   R+  + G+  
Sbjct: 387 VDMPIIKKVRIEGHTDSQ---GADASNLRLSQKRADAVMAQLIKLGIDPGRLEAV-GYGE 442

Query: 318 HRLKIASDP--MNSANRRIDILVED 340
            +   ++      + NRR +  + +
Sbjct: 443 TKPIASNATKAGRAENRRTEFNIVE 467


>gi|238020688|ref|ZP_04601114.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
 gi|237867668|gb|EEP68674.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
          Length = 224

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A+        +   +      L       GV  +     I +++        F  +S+  
Sbjct: 63  ALACGAVGAGVGGYMDYQEKKLREQLQGSGVAVDRQGDQIKLTM---PAAVTFATNSATL 119

Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +    L +  + LA  T+   +I GHTD +        N  LS +RA S    L + G
Sbjct: 120 SAQAQNSLSQAAQTLATYTDTTITIVGHTDNT---GNDAINNPLSYNRAQSVANYLNQHG 176

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           V+ +R+  +SG    +    +      + NRR++IL+   Q
Sbjct: 177 VAANRM-SVSGQGSRQPVADNSTEAGRAQNRRVEILINPDQ 216


>gi|332521842|ref|ZP_08398291.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332042514|gb|EGI78716.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 282

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 25/222 (11%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                S  R  E    L       +++ +         ++      K  + L++   KIS
Sbjct: 46  ADEAASAARLQELKDRLADMKSSNQALIETSKDLTVLTTQGAKNVEKSLESLKEKDLKIS 105

Query: 201 STLSGLVADN----------------IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                L   +                  + +     ++ + IS+ D+    +F   S   
Sbjct: 106 RLQDALTKKDSVTLALVTSLKKEVGLNDEDIEINVEKSVVFISLSDKL---LFKSGSYNI 162

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMK 301
                 +L K+  V+         + GHTD  P+    + +DNW LS+ R+ S  + L +
Sbjct: 163 TSRAKEILAKVATVINGKPNFEAMVEGHTDNVPYNRGGVLQDNWDLSVKRSTSIVRALQE 222

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            GV  +++    G   H   +++D     + NRR  I +  +
Sbjct: 223 LGVKPEQLIAA-GRGDHLPLVSNDTAENRAINRRTKIYILPK 263


>gi|319790060|ref|YP_004151693.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
 gi|317114562|gb|ADU97052.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
          Length = 254

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTD 273
               T   +LI +    N  +F ++S    PE    L +I +++ +      +   GHT 
Sbjct: 93  QIVVTENYVLIRLF---NKVLFKQNSLELTPEAKRALDQIAKIIKNLKGNYMVRVEGHTS 149

Query: 274 ----ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP-M 327
                 P  NI    W LS+ RA +  + L+  GV   R+  + G+   R     ++P +
Sbjct: 150 KDEPTVPMPNIQDS-WDLSIRRATTVVRYLISRGVDPSRLMAV-GYDATRPLYTWNNPIL 207

Query: 328 NSANRRIDILVE 339
            + NRR++I ++
Sbjct: 208 QARNRRVEIYIQ 219



 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 26/67 (38%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              +   ++ +W   ++D M++L+ FF++++ ++  D         YF           
Sbjct: 3  RRKKEECKSVPAWLTSFSDLMSLLLTFFILLYSMSTLDITKAMKFLSYFQGEKAQTFQQI 62

Query: 81 KGIFDEQ 87
            +   Q
Sbjct: 63 SIVKPIQ 69


>gi|114563544|ref|YP_751057.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334837|gb|ABI72219.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 429

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 7/175 (4%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            SIN   +     L+           + Q    +       L  +     +  E     +
Sbjct: 255 YSINNYSSEAYKELTSIVPWEKTIDAQQQISRDEALLLQQLLQTEIGKNLLEVEQLSDRV 314

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARD 283
            I I       +F   ++ P  +   +L KI   L  +   I I GHTD  P   +    
Sbjct: 315 RIRIGATE---LFASGNTQPRSDFEAILAKIALTLESTDGKILITGHTDDEPIFTSKYPS 371

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336
           NW LSL RA S   VL  S     R+    G           ++   + NRRI+I
Sbjct: 372 NWHLSLARATSIANVLANSASLSGRLWP-EGRGESEPRVVNDNEQNRALNRRIEI 425


>gi|42783685|ref|NP_980932.1| flagellar motor protein MotB [Bacillus cereus ATCC 10987]
 gi|42739614|gb|AAS43540.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
           cereus ATCC 10987]
          Length = 261

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+               +       K+   A  +++ + +L  
Sbjct: 52  KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 111

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +  + +      + T  G+ ++I++     +FD   +    E++ + +++  
Sbjct: 112 VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 168

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +   + S + G
Sbjct: 169 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 227

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 228 YGEYRSIAPNDTQEGKAKNRRVEVFIL 254


>gi|319944281|ref|ZP_08018557.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
 gi|319742576|gb|EFV94987.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
          Length = 220

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            F    ++   E    L  I   L      + +  GHTD+         N RLS+ RA +
Sbjct: 111 FFGFDRAVLKDEGKQKLDDIVNQLDGVALEVIVAVGHTDSV---GPEAYNQRLSVRRAEA 167

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
               L+  G+  +R+    G    +    +      + NRR++I V   +
Sbjct: 168 VKAYLVSKGIEANRVYT-EGKGEAQPVADNKTKEGRAKNRRVEIEVVGSR 216


>gi|315607338|ref|ZP_07882338.1| OmpA family protein [Prevotella buccae ATCC 33574]
 gi|315251041|gb|EFU31030.1| OmpA family protein [Prevotella buccae ATCC 33574]
          Length = 284

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           Q  + Q    N    S   Q    K       E       + +       +    +   +
Sbjct: 42  QDAKEQLAAANARVASLEDQLAQQKRDYASLQEMLDKSLVNANSNNINISKLVDQINESN 101

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++  
Sbjct: 102 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKS 158

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA------RDNWRLSLDRA 292
            S          L KI +++    +  + I G+TD  P    +      R+NW LS  RA
Sbjct: 159 GSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNIRNNWDLSALRA 218

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            S  Q L  + GV   R++   G   +     +        NRR  I++  +
Sbjct: 219 SSVVQYLQNRYGVDPKRLTAG-GRGEYNPVATNSTELGKQRNRRTQIIITPK 269


>gi|319953189|ref|YP_004164456.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421849|gb|ADV48958.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 604

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
              FD  S+     +   L+ I  +L  + +   S+ GHTD +     +  N+ LS  RA
Sbjct: 498 NISFDTGSANISSSSQSTLETIYNLLIQAEDTKLSLEGHTDDT---GSSEANYDLSQRRA 554

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +    L   G+ + R   + G        ++      + NRR+ I++  
Sbjct: 555 QAVVNFLRTKGIPQTRFQNVIGKGEDEPVESNTTNSGRAKNRRVVIVLLK 604


>gi|123442902|ref|YP_001006877.1| putative OmpA family protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089863|emb|CAL12719.1| putative OmpA family protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 458

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290
           +   MF   S     E + V++++ + +      + I GHTD+ P  +    +N  LS  
Sbjct: 348 KGDTMFQVGSDKVRSEIMSVIERVAQEVHRVQGAVLIIGHTDSMPINKPGFPNNQVLSEK 407

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  + + K+G+  D+I +  G    +   ++D       NRR++I V
Sbjct: 408 RAANVARFMEKAGIPTDKI-QFEGKGDTQPVSSNDDAAGRSQNRRVEIFV 456


>gi|157164740|ref|YP_001466195.1| outer membrane fibronectin-binding protein [Campylobacter concisus
           13826]
 gi|112801501|gb|EAT98845.1| outer membrane fibronectin-binding protein [Campylobacter concisus
           13826]
          Length = 337

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 9/124 (7%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           V+ +      +I + D      F   S    P+    ++K+ + +    +   +  GHTD
Sbjct: 215 VVVDERGCEKVIVLRDLDVN--FAFDSYKVGPKYAAEIKKVADFMGEHPDYKVVLAGHTD 272

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           +         N +LS  RA +  +VL   GV + +IS + G+   +    +      + N
Sbjct: 273 SV---GAEAYNQKLSEKRAKAVAEVLAGYGVEKAKISTV-GYGELKPIATNKTKEGRAQN 328

Query: 332 RRID 335
           RR++
Sbjct: 329 RRVE 332


>gi|254302232|ref|ZP_04969590.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322424|gb|EDK87674.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 196

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+       FD   S   P+   +L  + E +  +   ++I GHTD   +      N  
Sbjct: 59  TIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFITKNDYEVTIVGHTD---YIASNEYNMG 115

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           LS  RA +    L++ G+   RI +            +      + NRR++  +  R
Sbjct: 116 LSKRRAEAVKAKLIELGLDPSRIVETVARGEEEPVADNSTTEGRAKNRRVEFKLVKR 172


>gi|118474477|ref|YP_891591.1| outer membrane fibronectin-binding protein [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118413703|gb|ABK82123.1| outer membrane fibronectin-binding protein [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 345

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 15/258 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
            +  +    +  S   +     +  T+ + D++ G   Q      L        N     
Sbjct: 93  NLVKDFAITDTISVYGLIGVGYQDFTREANDVEDGGFAQAG----LGLKYKITDNFALKA 148

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
             +++L  ++     L                  P L +E+      K       +    
Sbjct: 149 EARDALDWNNGSNTFLYTLGFAVGFGESRSAAPAPVLVEEQPAPAPTKIVPAIGDEDGDG 208

Query: 202 TLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            L  +       KGV+ +      +I +  + N   F   S+   PE    ++++ +V+ 
Sbjct: 209 VLDNVDRCPGTPKGVVVDEYGCEKVIRLSLKAN---FAFDSAKVTPEYEAKIKEVADVMV 265

Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            + E   I  GHTD++        N +LS+ RA +    L K GVS+++I+ + GF   +
Sbjct: 266 ANPEYRVILEGHTDST---GPEDYNKKLSVKRADAVAATLEKMGVSKNKITTV-GFGEEQ 321

Query: 320 LKIASDP--MNSANRRID 335
              ++      + NRR++
Sbjct: 322 PIASNATKEGRAENRRVE 339


>gi|313205418|ref|YP_004044075.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312444734|gb|ADQ81090.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 598

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 17/283 (6%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS---IDEHITKNSVDLKIGSTN 119
           K+I+    P     +++     ++Q     +  NK + S   I  +I  ++V  K+ S +
Sbjct: 325 KSIDTSALPPNSIAVSSVIKTPEQQIAIPENDFNKNNQSLSTISPNIKSDTVSNKLQSGS 384

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           +          +   +++  S   +   T DS          D+  +           + 
Sbjct: 385 KSIVENYNSPKVISNTSTASSGQSEKVSTVDSVNKTASRLPVDISIANVSSSTQGNKVVE 444

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
               +         +L               +            I++  I       FD 
Sbjct: 445 NSVNVDSDGDGTPDNLDMC-------PNLAGVASNRGCPEISRRIILLFIKALTGIKFDS 497

Query: 240 SSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                   +  +L +I + L  +    I + GHTD+   +  +R N  LS  RA +    
Sbjct: 498 GKDKLKKRSYTILNEIAKELIKNPAYFIEVHGHTDS---KGNSRANKLLSELRASAVRNY 554

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           L++ GV  +RI  + G+        +  +     NRR++  V 
Sbjct: 555 LIRRGVDGNRIKSV-GYGDKMPVATNKTVKGRTLNRRVEFNVT 596


>gi|229105135|ref|ZP_04235786.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
 gi|228678316|gb|EEL32542.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
          Length = 233

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+        +      N       K+   A  +++ + +L  
Sbjct: 24  KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSANSLESEQIKKNAEAEVKQQEMNELKA 83

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +    +      + T  G++++I++     +FD   +    E++ + +++  
Sbjct: 84  VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  Q +L    +   + S I G
Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPGKFSAI-G 199

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 200 YGEYRSIAPNDTPEGKAKNRRVEVFIL 226



 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F        T +K    +Q P E    +   
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPNEEKELSANS 59

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
           L  ++       ++K    N+ K  Q+  +  
Sbjct: 60  LESEQIKKNAEAEVKQQEMNELKAVQKGIDKY 91


>gi|289766688|ref|ZP_06526066.1| outer membrane protein [Fusobacterium sp. D11]
 gi|289718243|gb|EFD82255.1| outer membrane protein [Fusobacterium sp. D11]
          Length = 180

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q L        S  +    +K +    +     ++I+    +  FD   SI   +   
Sbjct: 15  AVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNFDFDKSIVKAQYFD 74

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L+ I E +  +   I+I GHTD+       + N+ LS  RA +    L++ G++EDRI 
Sbjct: 75  LLKNIKEFVEQNNYEITIVGHTDSI---GSNQYNFGLSRRRAEAVKAKLLEFGLAEDRIV 131

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            I      +    +      + NRR++  +  R+
Sbjct: 132 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 165


>gi|284037622|ref|YP_003387552.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283816915|gb|ADB38753.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 241

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
              + ++   + +   FD+SS +  PE+   L K+ + L    + VI I GHTD      
Sbjct: 122 FRDLQVNQAFRLDNVYFDQSSYVLRPESYPQLNKLIKTLVTIPKLVIEIAGHTDNV---G 178

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             R N  LS +RA      L+ +G+ E+R+ + +G+   +    +D       NRR++ +
Sbjct: 179 DKRLNQALSENRAKIITNYLVTNGIPENRL-RHNGYGSSKPAAPNDTEENKRKNRRVEFV 237

Query: 338 VED 340
           V  
Sbjct: 238 VLA 240


>gi|237742848|ref|ZP_04573329.1| outer membrane protein [Fusobacterium sp. 4_1_13]
 gi|229430496|gb|EEO40708.1| outer membrane protein [Fusobacterium sp. 4_1_13]
          Length = 164

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 7/144 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++++     +      L E     + I + D+     FD   S   P+   +L  + E +
Sbjct: 3   ANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSFVKPQYDEMLTNLKEFI 60

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             +   ++I GHTD   +    + N  LS  RA +    L++ G+   RI  I       
Sbjct: 61  MKNDYELTIEGHTD---YIASNQYNMGLSKRRAEAVKAKLIELGLDPSRIVAIVPKGEEE 117

Query: 320 LKIASDP--MNSANRRIDILVEDR 341
               +      + NRR++  +  R
Sbjct: 118 PVADNKTTEGRAKNRRVEFKLVKR 141


>gi|254181403|ref|ZP_04888000.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|184211941|gb|EDU08984.1| ompA family protein [Burkholderia pseudomallei 1655]
          Length = 215

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P   ++L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAITPAFTLLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|153871249|ref|ZP_02000470.1| outer membrane protein OprF [Beggiatoa sp. PS]
 gi|152072284|gb|EDN69529.1| outer membrane protein OprF [Beggiatoa sp. PS]
          Length = 188

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDR 291
              F+  S+    E    L +  + L        I   GHTD          N  LS  R
Sbjct: 80  RVYFESDSTRIKAEFYPWLHQYAKTLQSELAETMIEIGGHTDNI---GSDEYNKDLSQRR 136

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341
           A +   +L+ K  +S +R+  + G+  ++      +    + NRR+++ +  +
Sbjct: 137 AQAVKNILLSKYKISANRLI-VKGYGENQPLDVNENREGRAINRRVELKIVPK 188


>gi|325920257|ref|ZP_08182205.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
 gi|325549250|gb|EGD20156.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
          Length = 224

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      K +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDEEVKQRQVEAQRRKTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+ +   L        E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDQLQPEGREVLKTLAAPLKEYLSSREEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADETRRAKNRRVEI 200


>gi|257470656|ref|ZP_05634746.1| Outer membrane protein [Fusobacterium ulcerans ATCC 49185]
          Length = 217

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L        V        + +++        F   SS  +      L  I  VL
Sbjct: 78  DRQEQELRERLKNTEVQVSQNGDNLNLNL---PGGVTFATDSSNIVSSFYGPLNSIATVL 134

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E  I + G+TD       A  N  LS  RA S    L++ GVS  RIS + G+   
Sbjct: 135 VQYPETRIIVNGYTDNV---GSASYNVSLSERRAASVRNYLIQQGVSARRISYV-GYGME 190

Query: 319 RLKIASDPM--NSANRRIDILVE 339
             +  +      + NRR+++ + 
Sbjct: 191 NPRATNSTAAGRAENRRVELEIL 213


>gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297]
 gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297]
          Length = 373

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 7/143 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L               T    +        +   F   S+     + V LQ+    L 
Sbjct: 219 RALPEPTPIPEPAAPEPITPPEPVCAEFNGAIDAIQFAVDSAQLNDTSRVRLQEAANTLR 278

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +  I I  HTD++        N  LS  RA +    L++ G+ E R++  +G+   +
Sbjct: 279 QFPDINIQIEAHTDST---ASEAYNLSLSDQRAQAIRDYLIELGIDEQRLTA-TGYGESQ 334

Query: 320 LKIASDPMNSA--NRRIDILVED 340
            + +++       NRR++  +ED
Sbjct: 335 PRASNESEEGRSLNRRVEFRMED 357


>gi|332085086|gb|EGI90266.1| inner membrane lipoprotein yiaD [Shigella boydii 5216-82]
          Length = 238

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 99  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 155

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 156 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 211

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 212 PANPIASNSTAEGKAQNRRVEITL 235


>gi|300723438|ref|YP_003712743.1| hypothetical protein XNC1_2522 [Xenorhabdus nematophila ATCC 19061]
 gi|297629960|emb|CBJ90580.1| Conserved hypothetical protein with OmpA/MotB domains (probable
           component of SST VI cluster) [Xenorhabdus nematophila
           ATCC 19061]
          Length = 406

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---D 283
           SII  +   +F  S+         +++ I E L      I + G+TD  P  +       
Sbjct: 282 SIIVLKGDGLFKSSAIQIKSRYSAIIKHIAEALNSLQGNILVVGYTDNIPVSSRRSHFLS 341

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           N+ LSL RA S  + L +     +R+S   G         +D     + NRR++I + 
Sbjct: 342 NYALSLARAKSVQRELQRYLNQPERVSA-EGKGAENPIAPNDTRSNRAKNRRVEITLL 398


>gi|146329067|ref|YP_001209253.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
 gi|146232537|gb|ABQ13515.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
          Length = 298

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 91/299 (30%), Gaps = 30/299 (10%)

Query: 44  LMAFFLVMWIINA----TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           LMA  +  ++  A    +DD  ++     +        + +       N          D
Sbjct: 16  LMALIVPAFLSQAFAQDSDDGVRQVNHVRWYKKQAVDFSNTANQSAPNNSASLIFVRTDD 75

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               +     +V+ +  ++ Q  +Y ++ +       S      +++  +       L  
Sbjct: 76  ADSVDTSANIAVNGRFQTSLQAGKYSQVYSCSGVNYISVLPTQERSNDLQFDATPYQLSA 135

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                  ++ + +         +  A +   R      +IS  +           +    
Sbjct: 136 GYTYFFLVDVDNSGRAQITGISRSQAEQYFARASMQTHQISRVVPNCPPAPARIELKI-- 193

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
                           +FD        +    ++ +   L        ++ GHTD+    
Sbjct: 194 ----------------LFDNDKHFVKQQYYSEIETVAGYLRQYPNTTVTLEGHTDS---N 234

Query: 279 NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
              + N  LS  R  +   VL++  G+S  RIS + G+   +   +++       NRR+
Sbjct: 235 ASEQYNINLSQRRVNAVRDVLIQHYGISPARISAV-GYGESQPIASNNTAAGRQQNRRV 292


>gi|194334296|ref|YP_002016156.1| OmpA/MotB domain-containing protein [Prosthecochloris aestuarii DSM
           271]
 gi|194312114|gb|ACF46509.1| OmpA/MotB domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 229

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  DN V G   E    GI +      +  +F  +SS     +   +QK+  +L  
Sbjct: 80  DAQAEEIDNSVDGATVERVGEGIRVVF---DSGLLFSTASSTLTSTSRYNIQKLASILNK 136

Query: 262 STEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +   +  GHTD+         N +LS +RA S   +L   GV   RIS + G+   R 
Sbjct: 137 YEDTNVVIEGHTDSV---GTESSNQQLSENRAESVASLLRAYGVYGSRISTV-GYGETRP 192

Query: 321 KIASDPMNSA--NRRIDILV 338
             +++       NRR+++L+
Sbjct: 193 VASNETAQGKKLNRRVEVLI 212


>gi|330959172|gb|EGH59432.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 260

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E        ++ +    +   +     +D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNYTALQTNPEATKVAALETKDASEWLDKAEKAFRDDEDVKKVDQLAY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250


>gi|319793927|ref|YP_004155567.1| type IV / vi secretion system protein, dotu family [Variovorax
           paradoxus EPS]
 gi|315596390|gb|ADU37456.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus EPS]
          Length = 458

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L ++     V  +       +S        MF    +    + + VL K+ + +   +  
Sbjct: 309 LASEIARGTVSVDEDEHRSAVSFRGDD---MFVPGQARLNAKILPVLDKVADEINQVSGS 365

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P +     +N  LS  RA +   VL+  GV   RI +  G         S
Sbjct: 366 VQVTGHSDNRPIKTREFPNNQVLSEKRADAVTAVLLGKGVVASRI-RTEGRGDTMPVADS 424

Query: 325 DPM--NSANRRIDILVEDRQG 343
                 + NRR+DI+V    G
Sbjct: 425 ATAAGRARNRRVDIVVIQGDG 445


>gi|297538022|ref|YP_003673791.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297257369|gb|ADI29214.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 616

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 16/218 (7%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +     + +   +    +    +  G    K        N  +       + +K   + 
Sbjct: 412 YDIQTAYARTYAGQGELLNKIGAARGGLPEYKRESYMDDENICQAVAPVQETVDKAALLA 471

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             K L          +S +        V  +     ++  +        F+ +S+     
Sbjct: 472 DAKPLSSTISIAKPVVSAVEPAK----VEVKPMANKVVPDVQ-------FETNSAKIKEI 520

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +  VL      L    +  + + GHTD     + A  N RLS  RA +    ++K G+  
Sbjct: 521 SYPVLDNAINTLKEWGDSNVEVGGHTDQR-DTSKADYNQRLSEKRAKAVMDYIVKKGIDA 579

Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            R+S   G+ + +    +DP      NRR++++ E ++
Sbjct: 580 KRLSA-KGYGYSKPIAENDPKEGNLVNRRVELVREQKK 616


>gi|241764514|ref|ZP_04762534.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
 gi|241366050|gb|EER60654.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
          Length = 212

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE    L  +   +      + I  GHTD+         N +LS+ R+
Sbjct: 102 DAFFDFDKSVLKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSV---GTDAYNQKLSVRRS 158

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 159 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 209


>gi|229062194|ref|ZP_04199517.1| OmpA/MotB domain protein [Bacillus cereus AH603]
 gi|229169237|ref|ZP_04296950.1| OmpA/MotB domain protein [Bacillus cereus AH621]
 gi|228614220|gb|EEK71332.1| OmpA/MotB domain protein [Bacillus cereus AH621]
 gi|228717088|gb|EEL68766.1| OmpA/MotB domain protein [Bacillus cereus AH603]
          Length = 233

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 82/207 (39%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+       ++      +       K+   A  +K+ + +L  
Sbjct: 24  KQMAVAFRSELAGGTGNKEFLSDQKPKEEKELSASSLESEKIKKDAEAEVKKQEMNELKA 83

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +    +      + T  G++++I++     +FD   +    E++ + +++  
Sbjct: 84  VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  Q +L    +  ++ S I G
Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPEKFSAI-G 199

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 200 YGEYRSIAPNDTPEGKAKNRRVEVFIL 226



 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F        T +K    +Q P E    +   
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPKEEKELSASS 59

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
           L  ++       ++K    N+ K  Q+  +  
Sbjct: 60  LESEKIKKDAEAEVKKQEMNELKAVQKGIDKY 91


>gi|90581117|ref|ZP_01236916.1| Putative OmpA family protein [Vibrio angustum S14]
 gi|90437638|gb|EAS62830.1| Putative OmpA family protein [Vibrio angustum S14]
          Length = 229

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    +      +  L  +  
Sbjct: 89  YMDVQEAKLRKQLSSSGITVTRNGDNIVLNM---PNEITFGFDQANLNDRAMNALHNVAI 145

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G TD+   +  A  N RLS  RA +    L++ GV+ +R+    G  
Sbjct: 146 VAKEYEKTQLNVLGFTDS---KGAASYNLRLSQVRADAVANYLIRQGVNANRVVS-QGRG 201

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
                 ++      + NRR++I++
Sbjct: 202 ESNPIASNSTANGRAQNRRVEIIL 225


>gi|53718641|ref|YP_107627.1| OmpA family transmembrane protein [Burkholderia pseudomallei
           K96243]
 gi|53725212|ref|YP_102481.1| ompA family protein [Burkholderia mallei ATCC 23344]
 gi|67639751|ref|ZP_00438587.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|121600283|ref|YP_993611.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124385832|ref|YP_001028928.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126440263|ref|YP_001058104.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126449467|ref|YP_001081159.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|126452105|ref|YP_001065339.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|134281074|ref|ZP_01767783.1| OmpA family protein [Burkholderia pseudomallei 305]
 gi|167003046|ref|ZP_02268836.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|167718574|ref|ZP_02401810.1| ompA family protein [Burkholderia pseudomallei DM98]
 gi|167814738|ref|ZP_02446418.1| ompA family protein [Burkholderia pseudomallei 91]
 gi|167901748|ref|ZP_02488953.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
 gi|217419903|ref|ZP_03451409.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|226194470|ref|ZP_03790068.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237811323|ref|YP_002895774.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|242316655|ref|ZP_04815671.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254177848|ref|ZP_04884503.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|254190801|ref|ZP_04897308.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254196800|ref|ZP_04903224.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|254261713|ref|ZP_04952767.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254298274|ref|ZP_04965726.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|254357860|ref|ZP_04974133.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|52209055|emb|CAH34995.1| putative OmpA family transmembrane protein [Burkholderia
           pseudomallei K96243]
 gi|52428635|gb|AAU49228.1| ompA family protein [Burkholderia mallei ATCC 23344]
 gi|121229093|gb|ABM51611.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124293852|gb|ABN03121.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126219756|gb|ABN83262.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126225747|gb|ABN89287.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|126242337|gb|ABO05430.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|134247380|gb|EBA47465.1| OmpA family protein [Burkholderia pseudomallei 305]
 gi|148026987|gb|EDK85008.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|157808098|gb|EDO85268.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|157938476|gb|EDO94146.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160698887|gb|EDP88857.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|169653543|gb|EDS86236.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|217397207|gb|EEC37223.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|225933555|gb|EEH29544.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237503911|gb|ACQ96229.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|238520349|gb|EEP83810.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|242139894|gb|EES26296.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|243061351|gb|EES43537.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254220402|gb|EET09786.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 215

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|330872771|gb|EGH06920.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
 gi|330964108|gb|EGH64368.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 260

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E+       ++ +        +      D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPESTKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  +T+    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250


>gi|257452971|ref|ZP_05618270.1| Outer membrane protein [Fusobacterium sp. 3_1_5R]
          Length = 217

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A      V  +     I + +        F   S+         L  I +VL
Sbjct: 78  DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    ++GHTD++      + N  LS  RA S    L+  GV+ +R+    GF  +
Sbjct: 135 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKHYLIGQGVASNRLMS-QGFGPN 190

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                +   +    NRR++I +  +
Sbjct: 191 NPVADNSTPDGRQMNRRVEIKIAPK 215


>gi|237703321|ref|ZP_04533802.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
 gi|226902585|gb|EEH88844.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
 gi|315285303|gb|EFU44748.1| OmpA family protein [Escherichia coli MS 110-3]
 gi|323954903|gb|EGB50683.1| OmpA family protein [Escherichia coli H263]
          Length = 219

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|304391383|ref|ZP_07373325.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
 gi|303295612|gb|EFL89970.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
          Length = 219

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
              +  + L A+    GV        I++++        F+  S+    +   VL  +  
Sbjct: 79  YQDNQEAKLRAELQNTGVSVSRVGNDIVLNMPSNIT---FNSGSADLKAQFFRVLNSVAL 135

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ GHTD+       + N +LS  R  +  Q L++ G    R   + G+ 
Sbjct: 136 VLKEYNKTLVNVSGHTDSD---GSDQFNQQLSERRGVNVAQYLVQQGTDSRRYY-VVGYG 191

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
             R   ++        NRR++I +
Sbjct: 192 EERPIASNASAAGKEQNRRVEIRL 215


>gi|310822654|ref|YP_003955012.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309395726|gb|ADO73185.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 653

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 14/255 (5%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P    +           + +  + L  G     +           LS S  ++    + T
Sbjct: 409 PLPGGAIRIAIQKDGYRLAERDLTLVPGQPQTVEVALESMAQPATLSFSTTAQKKPVAAT 468

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                 +    +T                +       + + + +Q       S    L  
Sbjct: 469 LRLSGPQKQELATSAAAPTKLVLPPGHYLVDVMAPGYLAQTREVQVAEGTAQSFAFDLKP 528

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267
               K V     +  +L  +        F    ++    +  +L ++ +V+  ++ + + 
Sbjct: 529 APKKKLVTVADNKLALLQQVQ-------FADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 581

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           +  HTD          N +LS +RA +    L +SG+   R+ ++ G+   R    +   
Sbjct: 582 VEAHTDNQ---GNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTP 637

Query: 328 NSA--NRRIDILVED 340
                NRR++ ++ +
Sbjct: 638 RGKELNRRVEFIILE 652


>gi|261342404|ref|ZP_05970262.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315039|gb|EFC53977.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 451

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLD 290
           +   +F   S    PE + V+++I   +      + I GHTDA+P       +N  LS  
Sbjct: 341 KGDALFLSGSVRVQPEMVKVIERIASEVRRVNGDVVIVGHTDATPISRPGLPNNVVLSEK 400

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA    Q  + +G+ E ++  + G    +   +       + NRR++  V 
Sbjct: 401 RAAEVAQYFISAGLPESKVK-VRGVGSSQPVASDATAQGRAKNRRVEFFVT 450


>gi|113866689|ref|YP_725178.1| outer membrane protein [Ralstonia eutropha H16]
 gi|113525465|emb|CAJ91810.1| outer membrane protein [Ralstonia eutropha H16]
          Length = 425

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 12/160 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RNTPMFDKSSS 242
            L+     I           +    L +      +IS+ +         R   MF    +
Sbjct: 266 DLEQQILAIGKATPPEPPKALRLAELLKDEIARGVISVQEDATRSAVTFRGDDMFGGGRA 325

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
               + + +L K+   +   +  +++ GH+D  P +      N  LS +RA +  + L  
Sbjct: 326 EVSDKVLPLLDKVAGEINKVSGKVTVVGHSDNVPIKTAKYPSNQVLSEERAATVTEYLAS 385

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            GV+++R+  I G         +      + NRR++I+V 
Sbjct: 386 KGVAKNRLEAI-GKGDSEPLTDNKTPAARARNRRVEIVVT 424


>gi|104782672|ref|YP_609170.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95111659|emb|CAK16380.1| putative outer membrane protein; OmpA family [Pseudomonas
           entomophila L48]
          Length = 269

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 88/266 (33%), Gaps = 10/266 (3%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K +           Q       +  +   S   +    +         + I    +  ++
Sbjct: 5   KPMAALALLALVGLQGCASQRSESALDDASAAFQKVKDDSNVLRSAPRDVIRAGESLGRA 64

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E     +   S+       S    +  ++     L      K+   +++ +L     K++
Sbjct: 65  ERLAGYIGTGSDVRHYAYLSQRYSEIASEHAKLALNQERLAKLDLERQRLQLGLREAKLA 124

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S              L        L+         +FD   +           K+ + L 
Sbjct: 125 SVQQQGKWVEAQIVALASEQTDRGLVM---TLGDVLFDTGEADLKNSASRTALKLVQFLQ 181

Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   V+ I G+TD++       DN +LS DRA +   +L+  GV E RI ++ G+    
Sbjct: 182 LNPRRVVRIEGYTDST---GNPEDNLKLSRDRAQAVADMLVDLGVDEKRI-QVEGYGDQY 237

Query: 320 LKIASDPM--NSANRRIDILVEDRQG 343
              A+      + NRR++I+  D +G
Sbjct: 238 PVEANASERGRAQNRRVEIVFSDDKG 263


>gi|187251173|ref|YP_001875655.1| peptidoglycan-associated (lipo)protein [Elusimicrobium minutum
           Pei191]
 gi|186971333|gb|ACC98318.1| peptidoglycan-associated (lipo)protein-like outer membrane protein
           [Elusimicrobium minutum Pei191]
          Length = 189

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 61/147 (41%), Gaps = 10/147 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             +      +++ +          T  +++        +F+ +S     E+   L+K+  
Sbjct: 50  HQAKPEPKNLSEEVSGYASVRQAGTKQVVTFT---TPILFETNSDKLKTESYDPLKKVAV 106

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL     + + ++G+TD+         N  LS  RA S   VL+++GV+E  ++   G+ 
Sbjct: 107 VLKARPNMQTEVKGYTDSL---GDPAYNVVLSEKRANSVRNVLVENGVNEANVTA-KGYG 162

Query: 317 HHRLKIASDP--MNSANRRIDILVEDR 341
                  +      + NRR+++ + ++
Sbjct: 163 AADPIADNKTKEGRAKNRRVELDITNK 189


>gi|259907293|ref|YP_002647649.1| hypothetical protein EpC_06170 [Erwinia pyrifoliae Ep1/96]
 gi|224962915|emb|CAX54396.1| Type VI secretion system, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
 gi|283477112|emb|CAY73012.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
           DSM 12163]
          Length = 413

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V+        ++++   +   +F  +S+        VL ++   + + +  
Sbjct: 264 LKPEIEQGLVVVRDEADRSVVTL---KGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGR 320

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S  + L +      R+    G         +
Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKA-EGRGDSNPLAPN 379

Query: 325 DPM--NSANRRIDILVEDRQG 343
           +     + NRR++I +    G
Sbjct: 380 NSAGNRARNRRVEITLLVSPG 400


>gi|157149164|ref|YP_001456483.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
           BAA-895]
 gi|157086369|gb|ABV16047.1| hypothetical protein CKO_05004 [Citrobacter koseri ATCC BAA-895]
          Length = 220

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYNKTAVNVVGYTDST---GGQDLNMRLSQQRADSVASALITQGVAANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|256027094|ref|ZP_05440928.1| Outer membrane protein [Fusobacterium sp. D11]
 gi|289765073|ref|ZP_06524451.1| outer membrane protein [Fusobacterium sp. D11]
 gi|289716628|gb|EFD80640.1| outer membrane protein [Fusobacterium sp. D11]
          Length = 151

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+       FD   S+  P+   +L  + + +  +   ++I GHTD   +      N  
Sbjct: 13  TIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTD---YIASNAYNMG 69

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           LS  RA +    L++ G+   RI  I           +      + NRR++  +  R
Sbjct: 70  LSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFKLVKR 126


>gi|269119617|ref|YP_003307794.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
 gi|268613495|gb|ACZ07863.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
          Length = 179

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++++   +I++     V +      + +     +   I    N   FD   S   PE  
Sbjct: 24  KQMRNDTIRINALEVEFVEEKAAVQEVKQNGSGEVKKIIRLNENKLYFDFDDSRIKPEYY 83

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +L+++ E +      + IRG+TD+   +     N RLS  RA S    L++ G+   R+
Sbjct: 84  GLLREMVEEIKAMDSDVIIRGYTDS---KGTDEYNNRLSQRRAESVRDKLIEFGLESGRV 140

Query: 310 SKISGFAHHRLKIASD--------PMNSANRRIDILV 338
            K  G         +            + NRRI++ +
Sbjct: 141 LKTEGMGERNPIAPNTNKDGSDNPAGRALNRRIELEL 177


>gi|157889051|dbj|BAF80990.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G++L  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321


>gi|157889046|dbj|BAF80986.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G++L  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321


>gi|157889041|dbj|BAF80982.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G++L  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321


>gi|157889031|dbj|BAF80974.1| fibronectin-binding protein [Campylobacter lari]
 gi|157889036|dbj|BAF80978.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G++L  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321


>gi|114319490|ref|YP_741173.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225884|gb|ABI55683.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 224

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV        +++++        F   S+    +   VL  +  
Sbjct: 83  YMDRQAEELRQRLRGTGVSVTRDGENVILNM---PGHVTFAFDSADLRSDFFEVLDSVAI 139

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     + +I + GHTD++     A  N RLS  RA +  + L+   V+E R+  + GF 
Sbjct: 140 VANEFDQTMIEVAGHTDST---GPAEYNQRLSERRAQTVARYLVGRDVAEMRMIAV-GFG 195

Query: 317 HHRLKIASDPMNSA--NRRIDIL 337
             R   ++        NRR++I 
Sbjct: 196 EERPIASNQTEEGRQQNRRVEIT 218


>gi|330950708|gb|EGH50968.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 260

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        +        ++ +        +     +D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDEDVQKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRIELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250


>gi|310765213|gb|ADP10163.1| OmpA family protein [Erwinia sp. Ejp617]
          Length = 413

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V+        ++++   +   +F  +S+        VL ++   + + +  
Sbjct: 264 LKPEIEQGLVVVRDEADRSVVTL---KGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGR 320

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S  + L +      R+    G         +
Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKA-EGRGDSNPLAPN 379

Query: 325 DPM--NSANRRIDILVEDRQG 343
           +     + NRR++I +    G
Sbjct: 380 NSAGNRARNRRVEITLLVSPG 400


>gi|78061841|ref|YP_371749.1| hypothetical protein Bcep18194_B0991 [Burkholderia sp. 383]
 gi|77969726|gb|ABB11105.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 434

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF    +        ++ KI   +A     
Sbjct: 301 LKDEIAAGTVSVDEDARHSAVTF---RGDAMFKPGGASVQASMNPLILKIAGEVAKVPGK 357

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R+     N  LS +RA    Q+L  +GV   R+  + G         +
Sbjct: 358 VTIIGYTDNVPIRSRHFASNQVLSEERAIQVMQMLQAAGVPASRLEAV-GKGDTDPVGDN 416

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 417 RTAQGRAQNRRVEI 430


>gi|320158759|ref|YP_004191137.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Vibrio
           vulnificus MO6-24/O]
 gi|319934071|gb|ADV88934.1| outer membrane protein ImpK/VasF OmpA/MotB domain [Vibrio
           vulnificus MO6-24/O]
          Length = 442

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            +     L  +  +  +  +     + I+        +F+  S+  +     V+ K+   
Sbjct: 289 ANQIQRSLATEIEMGLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345

Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   I + GHTD +P   +    NW LSL RA +    L  +G    R+    G   
Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGE 404

Query: 318 HRLKIASDPMNSA--NRRIDI 336
            R  ++++       NRR++I
Sbjct: 405 ARPLVSNETAEGRSINRRVEI 425


>gi|224373185|ref|YP_002607557.1| OmpA/MotB [Nautilia profundicola AmH]
 gi|223588582|gb|ACM92318.1| OmpA/MotB [Nautilia profundicola AmH]
          Length = 258

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 9/218 (4%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++  L           S     +  + +         +       +     +K   +
Sbjct: 19  TFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLAGALSVLEGGTQTEVSRNRIQKATPI 78

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           ++         K+S  ++                  G     I       F   S+    
Sbjct: 79  EKTDETAQTVNKLSQAVAEFRQFTAGGKGPAIVLEEGEEGFFIRLPADITFKPGSAQITD 138

Query: 247 E-TIVVLQKIGEVLAHSTEVI---SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300
           E +++ L++I  ++           I+G+TD  P    +   DNW LS  RA S  ++L+
Sbjct: 139 EDSLLFLKRIALIIKEYLPKNIEIQIKGYTDNQPPPPTSPYADNWELSAARALSVLKILI 198

Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           K GV+  ++S  + +  +    A+      + NRR++I
Sbjct: 199 KDGVNPKQLSAAA-YGEYHPIAANATPEGRAKNRRVEI 235


>gi|153004024|ref|YP_001378349.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027597|gb|ABS25365.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 506

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 58/204 (28%), Gaps = 8/204 (3%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              + +L      G+           +    +         ++         +    +  
Sbjct: 302 GGVRFALDGARPAGEPSGAPDRDRDGVADGLDACPEVPGPVELDGCPDSDADEIPDPQDR 361

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         V  E     I    +  ++   FD        ++  VL  I  +LA
Sbjct: 362 CPAEPGPPQRDGCPVAEEEPLVEIETERLSLKDAIQFDTGRDTLRSQSFPVLDAISGILA 421

Query: 261 HSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              E   + + GHTD          N  LS  RA +  + L   G+   R+    G+   
Sbjct: 422 AHPELRRVRVEGHTDDV---GTNAYNKDLSDRRARTVVRYLAGKGIVPGRLVPA-GYGEE 477

Query: 319 RLKIASDPM--NSANRRIDILVED 340
           R    +      + NRR++  + D
Sbjct: 478 RPIAPNTSALGRAKNRRVEFTIVD 501


>gi|89074695|ref|ZP_01161153.1| Putative OmpA family protein [Photobacterium sp. SKA34]
 gi|89049459|gb|EAR55020.1| Putative OmpA family protein [Photobacterium sp. SKA34]
          Length = 229

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    +      +  L  +  
Sbjct: 89  YMDVQEAKLRKQLSSSGITVTRNGDNIVLNM---PNEITFGFDQANLNDRAMNALHNVAI 145

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G TD+   +     N RLS  RA +    L++ GV+ +R+    G  
Sbjct: 146 VAKEYEKTQLNVLGFTDS---KGAESYNLRLSQVRADAVANYLIRQGVNANRVVS-QGRG 201

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                 ++      + NRR++I++
Sbjct: 202 ESNPIASNSTSNGRAQNRRVEIIL 225


>gi|330815362|ref|YP_004359067.1| OmpA/MotB [Burkholderia gladioli BSR3]
 gi|327367755|gb|AEA59111.1| OmpA/MotB [Burkholderia gladioli BSR3]
          Length = 345

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 79/264 (29%), Gaps = 7/264 (2%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T +       +     +     +S           +  G     +  +         +  
Sbjct: 84  TGTNVANGAGSGQATGAGTGATVSAPAPANATPGQVVAGGKVPDEATKAAVLQKLRDTYG 143

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +   +  +   +           L     K+ +     +    I      +      +
Sbjct: 144 AGNVVDQIEVGDVTTPPNWSANVQKLIGPQLKQISKGQLKIDGTSIDVRGEVRNEALRQQ 203

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             S   + L     ++  L  +     ++       T  F+  S+   P+   +L ++ +
Sbjct: 204 VASDMANQLNPTYTIRNALRVSASEQGILDQTLANRTIEFETGSATLTPQGRAILDQMAD 263

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            ++       +I GHTD          N  LS  RA +    L+  G++  +++  +G  
Sbjct: 264 AMSKLANRQVTIIGHTDN---SGNRATNISLSQARADAVKGYLVAKGIASQQLTT-TGVG 319

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
             +   ++D     + NRRI+  V
Sbjct: 320 PDQPIASNDTADGRARNRRIEFRV 343


>gi|256840118|ref|ZP_05545627.1| outer membrane protein [Parabacteroides sp. D13]
 gi|256739048|gb|EEU52373.1| outer membrane protein [Parabacteroides sp. D13]
          Length = 226

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  +SS     +   L+     L  + +  I I G TD +        N  LS  
Sbjct: 105 DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 161

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S Y  LM  GVS DR+    G   H    ++D       NRR++I++   Q
Sbjct: 162 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 214


>gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
 gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
          Length = 367

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 13/134 (9%)

Query: 213 KGVLFETTRTGILI------SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265
           + V+       + I      ++ +     +F   S+    E       I E L ++    
Sbjct: 228 EVVVIAEPDPPVRIVKAEKLTLNELNGQALFGFDSAKLSSEVEAHFDSILERLKNNPTSE 287

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           +SI GHTD+       + N  LSL RA S       +G++  RI  + G         ++
Sbjct: 288 LSIVGHTDSQ---GSDKYNEGLSLRRAQSVANYFESNGIAMSRIK-VEGRGETDPVADNN 343

Query: 326 P--MNSANRRIDIL 337
                S NRR+D++
Sbjct: 344 TLKGRSMNRRVDLI 357


>gi|146308665|ref|YP_001189130.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145576866|gb|ABP86398.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 222

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+         L  +    
Sbjct: 81  DRQEAELRRQMQGTGVEVQRQGDVIQLIM---PGNITFATDSAEIASSFYAPLNNLANSF 137

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I + GHTD++        N  LS  RA S    L+  GV   R+S   G    
Sbjct: 138 RQYNQNSIEVVGHTDST---GSHSYNMSLSQRRAQSVASYLIAQGVDGSRVST-RGMGPD 193

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 194 QPVASNATAEGRAQNRRVEVTLRPLPG 220


>gi|56415540|ref|YP_152615.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|56129797|gb|AAV79303.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 216

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 76  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 132

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 133 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 188

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 189 PANPIASNSTAEGKAQNRRVEITL 212


>gi|326801229|ref|YP_004319048.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326551993|gb|ADZ80378.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 177

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                +F+  S +    +  VL +I   +        +I GH         A  N  LS+
Sbjct: 69  NFKNILFEFDSGVLKTASYSVLDQIVREMKKDPSVKFTINGHAS---LEGSAEHNMALSV 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           DRA +    L+ +G+S D ++   GF   +    ++       NRR++I +  
Sbjct: 126 DRANAVKLYLVNAGISPDNLTA-QGFGATKPVATNETEEGRSQNRRVEIKLSR 177


>gi|262199634|ref|YP_003270843.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262082981|gb|ACY18950.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 291

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 9/246 (3%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  E +    ++++       ++  +L+     L+  ++            E  K   + 
Sbjct: 33  AQTEVLETKELEIQNLEQAIAEEEAKLKELNNQLAALKEKVRLTEEEVASMEAEKVRVEG 92

Query: 161 T-DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                             LS+      KRK   +    +    L+   +      +  + 
Sbjct: 93  ELAAVVKDRARLKSSAEELSQALSELGKRKAEAEKRVAQFRDLLNRFRSLIDAGKLKVKI 152

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278
           T   +++ +       +F    +    + IV + +IGEVLA   +    I GHTD  P  
Sbjct: 153 TDGRMILELPTD---VLFASGRADLSEDGIVSITQIGEVLAAIPDRRYQIEGHTDNVPIS 209

Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                 NW L+  RA +  + L ++G+    +S  S F   R   +++       NRRI+
Sbjct: 210 TARYPSNWELAAARALTVLKTLREAGMQGSTLSAAS-FGEFRPVASNNSDAGRRANRRIE 268

Query: 336 ILVEDR 341
           I++   
Sbjct: 269 IVIVPD 274


>gi|167571440|ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensis C6786]
          Length = 308

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 87/285 (30%), Gaps = 19/285 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH-ITKNSVDLKIGSTNQKK 122
           A+     P     + A             +              +    +   G      
Sbjct: 27  ALADNVGPATVTPIDAGGVPVKSTPLAAPAPAAASGAGGGATVSSPPPANATPGQVVAGG 86

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYF 174
           +          L   + +    N + +              ++ K    +     +    
Sbjct: 87  KVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNWSANVQKLIGPQLKQISKGQLK 146

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           +     +    +  + + Q LA  +++ L+      I  G+    +  G+L   +  R  
Sbjct: 147 IDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTI 204

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+  S+   P+   +L ++   LA  +     I GHTD          N  LS  RA 
Sbjct: 205 E-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRASNIALSQARAD 260

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +    L+  G++  +++  +G    +   ++D     + NRRI+ 
Sbjct: 261 AVKGYLVAKGIASQQLTT-TGVGPDQPIASNDTNDGRARNRRIEF 304


>gi|218778169|ref|YP_002429487.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218759553|gb|ACL02019.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 381

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + +    +   ++ K   VL    +  + I GHTD+       + N  LS DRA + 
Sbjct: 277 FKTNKADIAKKYYPIMDKAICVLKKYPDLKVLIGGHTDSR---GPDKFNQELSQDRAQAV 333

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              ++K GV+ +R+  + GF   +   A+D     + NRR+ + 
Sbjct: 334 MDYMVKKGVAPERL-SVRGFGAAKPIAANDSKEGRAQNRRVTLT 376


>gi|126214998|emb|CAM35534.1| hypothetical protein [Pseudomonas fluorescens]
          Length = 254

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
               +  + +        +       L+  +  +  +     D        +    + + 
Sbjct: 16  STPPNANLENARTNFSSLQTNPQATKLAALETKDASEWLDKADKAYRDKEDEKKVDQLAY 75

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +   +   +     +  + K   D   +            +   +  + T  G L++
Sbjct: 76  LTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 135

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
             D     +F  + S      +V + K+ + L  + +    + G+TD++        N  
Sbjct: 136 FGD----VLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 188

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           LS  RA S  + L + GV   RI    G+        +      + NRR+++ + +  
Sbjct: 189 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 245


>gi|113867012|ref|YP_725501.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Ralstonia eutropha H16]
 gi|113525788|emb|CAJ92133.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Ralstonia eutropha H16]
          Length = 308

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S +       +L +  + VLAH    + + GHTD++        N  LS  RA + 
Sbjct: 207 FETDSDVLSAAARPLLDRAAKAVLAHPDWRLRVEGHTDST---GGDARNQPLSERRAAAV 263

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            + L  +GV  DR+    G+      +++D     + NRR+++
Sbjct: 264 RRYLESAGVPADRLDA-KGYGATHPLMSNDTPFGRAQNRRVEL 305


>gi|218550833|ref|YP_002384624.1| outer membrane lipoprotein [Escherichia fergusonii ATCC 35469]
 gi|218358374|emb|CAQ91021.1| putative outer membrane lipoprotien [Escherichia fergusonii ATCC
           35469]
 gi|324111886|gb|EGC05866.1| OmpA family protein [Escherichia fergusonii B253]
 gi|325499107|gb|EGC96966.1| outer membrane lipoprotein [Escherichia fergusonii ECD227]
          Length = 219

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD +S+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSNSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ +RI+   G  
Sbjct: 137 VLKEYPKTAVNVLGYTDST---GGYDLNMRLSQQRADSVASALITQGVAANRINT-RGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|238918002|ref|YP_002931516.1| outer membrane lipoprotein [Edwardsiella ictaluri 93-146]
 gi|238867570|gb|ACR67281.1| inner membrane lipoprotein YiaD [Edwardsiella ictaluri 93-146]
          Length = 219

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GVS  RI  I G  
Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALIVQGVSAGRIRTI-GMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PANPIATNSTAAGKAQNRRVEITL 216


>gi|317491523|ref|ZP_07949959.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316921070|gb|EFV42393.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 564

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 6/131 (4%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDA 274
             E     ++   +   +  +FD +S+     +  VL      +      + +  GHTDA
Sbjct: 426 KVEQKAKVVIPKAVRLDSLSLFDTNSAKLKSGSTKVLVTALVDIKAQPGWLIVIAGHTDA 485

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
           +     A+ N  LS  RA +    +   G        + G+   +   +++     +ANR
Sbjct: 486 T---GNAQRNLALSQARAEAVRDWMRSMGDIPVTCFAVQGYGASQPIASNETDAGRAANR 542

Query: 333 RIDILVEDRQG 343
           R+DI +    G
Sbjct: 543 RVDIRLVPEAG 553


>gi|325954863|ref|YP_004238523.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437481|gb|ADX67945.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 500

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 78/281 (27%), Gaps = 17/281 (6%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            +F           K   D    P+       D  I       +        +    + +
Sbjct: 209 DFFQHTVGVTFRFGKQDRDGDGIPDEEDACPDDFGIATDDPLTNGCP---DRDGDGVFDK 265

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
            +        ++ +           +   +  +    +++              +K    
Sbjct: 266 DDACPDVPGLAEFNGCPDTDGDGIPDNEDECPEVAGPKENNGCPWPDTDGDGVLDKDDEC 325

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGV----LFETTRTGILISIIDQRNTPMFDKSSS 242
                L +      +   G+   +                   + +  + +  +F+ +S 
Sbjct: 326 PTVPGLAEFNGCPDTDGDGIPDKDDACPTVKGPKENNGCPWTEVEVAKRLSNILFEYNSD 385

Query: 243 IPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             +P +   ++   ++L           I GH D          N  LSL RA +   +L
Sbjct: 386 KIVPSSYEDVRIAAQILNSEDLLANSYYIDGHADQR---GRDAYNKALSLKRAQALVNIL 442

Query: 300 MKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           ++ G V   R++   G    +L    +       NRR+++L
Sbjct: 443 VERGNVDRKRLTA-RGLGKTQLLCTENTEECYQRNRRVEVL 482


>gi|296101897|ref|YP_003612043.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056356|gb|ADF61094.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 412

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 8/179 (4%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
              +    N  L  + + ++     ++  + L   ++     L  +     V  +     
Sbjct: 222 NWRLGDNTNPVLAKIYQSQLPETTIQQPARQLPAVLN-LRGFLKPEIDAGLVAVKDEADR 280

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282
            ++ +   +   +F  +S++       V+ +I + + + +  I + G++D  P R+    
Sbjct: 281 SVVIL---KGDGLFASASTVVRDRYEPVINRIAQAMNNVSGKILVVGYSDNVPIRSARFA 337

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            N+ LSLDRA S  ++L  S    DR+    G         ++     + NRR++I + 
Sbjct: 338 SNYELSLDRARSVQKMLQGSLSQPDRVKA-EGRGEINPVAPNNTPENRARNRRVEITLL 395


>gi|170751735|ref|YP_001757995.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658257|gb|ACB27312.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 337

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 85/247 (34%), Gaps = 21/247 (8%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + +   + + Q     +   +     +  +            +    +   ++ ++    
Sbjct: 92  VEAERDRAKVQAEAATVSQGAAGTLDKQLETERGATRRAQSQIDLLNEQISAMRRQLAAL 151

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-- 232
              L+  +    + + R+ +L  +++  L+  V +       F      IL +  D R  
Sbjct: 152 EDALAASESRDRESQARIAELGSRLNVALAQKVQELARYRSNFFGRLRQILGNRPDIRVV 211

Query: 233 -------NTPMFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPF 277
                  +  +F   S+   PE    L +I         ++ A    V+ + GHTDA P 
Sbjct: 212 GDRFVLQSEVLFPAGSATLKPEAGPELDRIAGAVSELAKQIPADLPWVLRVDGHTDARPI 271

Query: 278 RNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
                  NW LS  RA +  Q L   G+    +   + F   +   A       + NRRI
Sbjct: 272 STSQFPSNWSLSAARAIAVVQFLAGKGIPPQHLLAGA-FGEFQPLEAGATEEAYARNRRI 330

Query: 335 DILVEDR 341
           ++ + +R
Sbjct: 331 EMKLTER 337


>gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
 gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
          Length = 459

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE    +  +G+ +       ++  GHTD        + N  LS  RA + 
Sbjct: 228 FDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEGHTDNV---GDPQYNLDLSKRRAQAV 284

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+ + G+   R+    GF   R    ++       NRRI+ +++
Sbjct: 285 VDYLVDNYGIERSRLEA-RGFGMARPIATNNTDEGRQANRRIEAIID 330



 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 85/235 (36%), Gaps = 12/235 (5%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           L+      K + +    +          ++   +   +           +L+ S  + + 
Sbjct: 224 LQGEFDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEGHTDNVGDPQYNLDLSKRRAQA 283

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQ 231
                +    I   + + R   +A+ I++  +        +          +  +   D+
Sbjct: 284 VVDYLVDNYGIERSRLEARGFGMARPIATNNTDEGRQANRRIEAIIDCAFDVKEVQPPDR 343

Query: 232 RNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
               +   FD   +   P+    + K+GE +       ++  GHTD       +  N +L
Sbjct: 344 LCMTLLLEFDSGKADIKPQYRDEMAKVGEYMNKYPTTTAVIEGHTDNV---GGSDYNMKL 400

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           S  RA +A Q L+++ G+ + R+S   G+ + R    +      + NRRI+ +++
Sbjct: 401 SQRRAENAVQYLVQNFGIDKSRLSA-KGYGYTRRIAYNSTPEGRAKNRRINAVID 454


>gi|28868712|ref|NP_791331.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213969090|ref|ZP_03397229.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|301384017|ref|ZP_07232435.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302058723|ref|ZP_07250264.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
 gi|302131685|ref|ZP_07257675.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28851951|gb|AAO55026.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213926088|gb|EEB59644.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|331016335|gb|EGH96391.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 260

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E+       ++ +        +      D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPESTKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  +T+    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250


>gi|227873496|ref|ZP_03991745.1| OmpA family membrane protein [Oribacterium sinus F0268]
 gi|227840670|gb|EEJ51051.1| OmpA family membrane protein [Oribacterium sinus F0268]
          Length = 414

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 85/264 (32%), Gaps = 24/264 (9%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
            + + + +++    + + +      D+         + G+       + +   +   S S
Sbjct: 169 GSGQYVDEQKGITLQVNSDGTGQYSDDGQGITLQVSEGGNGIFTDTKKEITMMVSDDSTS 228

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                    +  D        ++    K+  + +        ++ + A   +K  +    
Sbjct: 229 YTQGSIDIDVKPDGSGSYYNSETGLSIKNDGQGKAVISLGNDEKTVDARPLEKPTKLPKL 288

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +   +  L A++++  +                 +  +FD       P+   +L  +  
Sbjct: 289 SMVPAVPSLEANSLLITL----------------DSGVLFDVDKYDIRPDAEKILNDLAT 332

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL         I GHTD+         N  LS +RA S    L   GV+ +      G+ 
Sbjct: 333 VLKEGGITAFQIDGHTDSMD---TDEHNQVLSENRANSVKSYLASQGVTAE--ITTHGYG 387

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
             R    +D       NRR++I+V
Sbjct: 388 ESRPVATNDTAEGRQQNRRVEIIV 411


>gi|153807056|ref|ZP_01959724.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
 gi|149130176|gb|EDM21386.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
          Length = 278

 Score = 99.7 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 49  GNQMSVQIKNLMRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLNQKKNELNERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            + I++           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QQMINAQNEKVRKLLSSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            V+  +I + SG   +     ++       NRR +I+
Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261


>gi|154490982|ref|ZP_02030923.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
           43184]
 gi|154088730|gb|EDN87774.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
           43184]
          Length = 278

 Score = 99.7 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 20/208 (9%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLAKKISST-- 202
           SL RD+ +     ++     + N  E   L  L  +K+  +  ++R + +L   I++   
Sbjct: 61  SLERDTTRMGKNIRNYQSMLNTNMTEQEKLNSLLSQKMNELDERERTINELQDMINAQTE 120

Query: 203 --------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                   +   +       +        + +++ D+    +F+  S+         L K
Sbjct: 121 RVQNLLNSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFESGSARVDKRGKEALAK 177

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311
           + EVL   +++   I GHTD+ P       DNW LS+ RA S  ++L K  GV   +I  
Sbjct: 178 LAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVKPLQIQP 237

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDIL 337
             G         ++     + NRR +I+
Sbjct: 238 C-GRGEFMPVADNETADGRAKNRRTEII 264


>gi|320182069|gb|EFW56974.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
          Length = 219

 Score = 99.7 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|171316577|ref|ZP_02905793.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171098305|gb|EDT43111.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 316

 Score = 99.7 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153
               I     +   G      +          L   + +    N + +            
Sbjct: 74  TAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     E    +  + + Q LA  +++TL+      I  
Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYT--IKN 191

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   L+        I GHT
Sbjct: 192 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 250

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D          N  LS  RA +    L+   +   +++  +G    +    +D     + 
Sbjct: 251 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 306

Query: 331 NRRIDILV 338
           NRRI+  V
Sbjct: 307 NRRIEFRV 314


>gi|149922653|ref|ZP_01911080.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
 gi|149816450|gb|EDM75949.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
          Length = 279

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 8/231 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +  + +            + +Q        L       +   +  + E +   ++   L 
Sbjct: 32  TAARAESKDLSVALQEAETAAQLLGANIADLEDQLRTAEVRAQEAETELAGVLKDKSNLS 91

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNT 234
              +E   A+   +RL+  A+ + + +   V +     +   T +  I+    +++ R  
Sbjct: 92  ASVEEMQQALAELQRLRAAAE-VRAGMYRSVLNKFKTLIDNGTLKAKIVDGRMVLELRTD 150

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRA 292
            +FD   +    E    + ++G++LA  ++    + GHTD  P +  A   NW L+  RA
Sbjct: 151 ILFDSGKAKLSDEGAATVGEVGKLLAELSDRRFQVEGHTDNVPIKTKAFPSNWELASARA 210

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            +    ++ +G+    IS  + +A  R   ++  D   + NRRI+I++   
Sbjct: 211 ITVVNEMIAAGMPATNISAAA-YADTRPAASNATDEGRAQNRRIEIVLIPD 260


>gi|150024175|ref|YP_001295001.1| flagellar motor/chemotaxis (MotB)-related protein [Flavobacterium
           psychrophilum JIP02/86]
 gi|149770716|emb|CAL42180.1| Flagellar motor/Chemotaxis (MotB)-related protein [Flavobacterium
           psychrophilum JIP02/86]
          Length = 320

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 105/304 (34%), Gaps = 16/304 (5%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           + +++ T     K I          L      + DE    + +       +       + 
Sbjct: 9   LLVLSLTTSCVSKKIFADLETKFAELKKERNALSDENETLKTTKNQFQLDNATLKTELDK 68

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           +  +                    S +   ++   SL  + +K +DL    + ++     
Sbjct: 69  LKAERDKLAADYAASSNNLKTLQSSYNALEKNSDESLKANMDKNRDLLAQLEAKEKALAA 128

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDL-------AKKISSTLSGLVADNIVKGVLFETTRTG 223
           E   L  LS +      R   L+ L        KK+  TLS  +     KG+  +     
Sbjct: 129 EKGRLAKLSGDLKDRSDRVNELEALIAAKEASMKKLKETLSKSLKAFEGKGLTVQQKDGK 188

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA- 281
           + +S+    N  +F+  S     E    +  + +VL  + ++   I GHTD   F     
Sbjct: 189 VYVSM---ENKLLFESGSWAVGTEGKKAVVAVAKVLGDNPDISILIEGHTDNDKFAGAVG 245

Query: 282 --RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              +NW LS  RA S   +L ++     +    +G       +++D     + NRRI+I+
Sbjct: 246 QIENNWDLSTKRATSIVNILGENPKVNKQNLTAAGRGEFSPLMSNDTPEGKAKNRRIEII 305

Query: 338 VEDR 341
           +  +
Sbjct: 306 LTPK 309


>gi|299822262|ref|ZP_07054148.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
 gi|299815791|gb|EFI83029.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
          Length = 265

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 19/232 (8%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S + KK  Q        +           + ++D         S D  +     ++  
Sbjct: 37  TSSIDAKKFEQMGNAFKKIVDEGAAGNQAHVAKSKDPTNI-----SADAIEKAMAAQDKQ 91

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               + +K L  + K +L+   KK+ S +S    +++   +       G+LI+I D    
Sbjct: 92  KSAAASKKALEKQNKMQLEAFKKKLDSYIS---TEHLEAKLSTRYANDGLLITIRDD--- 145

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
            +FD  S+        + ++IG +     S     I GHTD  P      + NW LS  R
Sbjct: 146 ILFDSGSAELSASKRKIAKEIGMLFKQGDSKMEGIISGHTDDVPIHTATYKSNWELSAAR 205

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           A +  + ++     +    +    G+  ++    +D       NRR++I+V 
Sbjct: 206 AVNFMEAIITENTSLDPG-LFSARGYGEYKPVAKNDNAVDREKNRRVEIMVR 256



 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 43/107 (40%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++       +   SW + Y+D +T+L+A F+V++  ++ D    + +   F         
Sbjct: 2   RRRKKHSEEHVDESWLLPYSDLLTLLLALFIVLFATSSIDAKKFEQMGNAFKKIVDEGAA 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            ++    +   P   S + I+ ++     + S      +  ++ + Q
Sbjct: 62  GNQAHVAKSKDPTNISADAIEKAMAAQDKQKSAAASKKALEKQNKMQ 108


>gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586]
 gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586]
          Length = 332

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 7/146 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              +       + ++              + + + +    +F   S  P  E I  L +I
Sbjct: 184 QPALVEAAPTSIIEDTPVKETVTVKTPPQIQTFLPKTTVGLFGFDSVEPSQEFIDQLTEI 243

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL    +    + GHTD++     A  N  +S  RA +    L++ GV+  ++ +  G
Sbjct: 244 SSVLISYPQAQAKVVGHTDST---GSALYNQNISEHRAQAVVNKLIELGVTPTQL-EWRG 299

Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338
               +    ++       NRR++I +
Sbjct: 300 EGEFQPVADNNTAEGRAANRRVEITI 325


>gi|167909987|ref|ZP_02497078.1| ompA family protein [Burkholderia pseudomallei 112]
 gi|254199385|ref|ZP_04905751.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254205699|ref|ZP_04912051.1| OmpA family protein [Burkholderia mallei JHU]
 gi|147748981|gb|EDK56055.1| OmpA family protein [Burkholderia mallei FMH]
 gi|147753142|gb|EDK60207.1| OmpA family protein [Burkholderia mallei JHU]
          Length = 207

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 95  PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 151

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 152 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 204


>gi|304397299|ref|ZP_07379178.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
 gi|304355448|gb|EFM19816.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
          Length = 412

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++++   +   +F  +++      + V+Q+I   + + +  
Sbjct: 263 LKPEIDAGLVAVRDEADRSVVTL---KGDGLFASAATDVRGRYVDVIQRIAAAMNNVSGQ 319

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S   +L +      R+    G       + +
Sbjct: 320 IQVIGYSDNVPIRSARFGSNFELSLARARSVQSLLQQQLADPSRVKA-EGRGESNPLVPN 378

Query: 325 DPM--NSANRRIDILVE 339
           +     + NRR++I + 
Sbjct: 379 NSAENRARNRRVEITLL 395


>gi|319764890|ref|YP_004128827.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|330827094|ref|YP_004390397.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|317119451|gb|ADV01940.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
 gi|329312466|gb|AEB86881.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 214

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F  + S   P    +L +  E L ++    + I GHTD++        N  LS
Sbjct: 102 DIPSDISFATNRSDIQPSFRPILDRFAEGLRNNPNAEVRIIGHTDST---GNDAINDPLS 158

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           LDRA S    L   GVS  RI  + G        ++D     + NRR++I + +RQG
Sbjct: 159 LDRATSTRNYLTARGVSGARIH-VDGRGSREPIASNDTAEGRARNRRVEIFMGERQG 214


>gi|171319661|ref|ZP_02908754.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           ambifaria MEX-5]
 gi|171095114|gb|EDT40122.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           ambifaria MEX-5]
          Length = 411

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF    +        ++ KI   +A     
Sbjct: 278 LQDEIAAGTVSVDEDARHSAVTF---RGDAMFKPGGASVQASMNPLISKIAAEIAKVPGK 334

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R+     N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 335 VTIIGYTDNVPIRSRHFASNQMLSEERATQVMQMLQTAGVPANRLEAV-GKGDADPVGDN 393

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 394 RTAQGRAQNRRVEI 407


>gi|300770791|ref|ZP_07080669.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762348|gb|EFK59166.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 440

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 14/218 (6%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +   S    S     +   +    K      + E  +                L      
Sbjct: 226 LGSPSKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNSDLKDDDGD 285

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSS 242
            + +   K  +T SG   D     +    T+    I + ++    +        FD   S
Sbjct: 286 GVANKYDKCPNTPSGTKVDGSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKS 345

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                +   L ++  +L      + + GHTD +      + N RLS +RA +    L   
Sbjct: 346 TIRSTSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGK 402

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           G +  RI   +G+  ++   ++        NRR++  +
Sbjct: 403 GANPSRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 439


>gi|227538391|ref|ZP_03968440.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241773|gb|EEI91788.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 440

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 14/218 (6%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +   S    S     +   +    K      + E  +                L      
Sbjct: 226 LGSPSKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNSDLKDDDGD 285

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSS 242
            + +   K  +T SG   D     +    T+    I + ++    +        FD   S
Sbjct: 286 GVANKYDKCPNTPSGTKVDGSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKS 345

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                +   L ++  +L      + + GHTD +      + N RLS +RA +    L   
Sbjct: 346 TIRSTSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGK 402

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           G +  RI   +G+  ++   ++        NRR++  +
Sbjct: 403 GANPSRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 439


>gi|157371239|ref|YP_001479228.1| hypothetical protein Spro_2999 [Serratia proteamaculans 568]
 gi|157323003|gb|ABV42100.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
          Length = 406

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 6/140 (4%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L   +   I +G++         + I+  +   +FD +++      I V+ +I   +   
Sbjct: 251 LKSFLRKEIAEGLVVVRDEAQQSVVIL--KGDGLFDSAATTVRGNYIPVIDRIAAAMNGV 308

Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
           +  I + G++D  P R+     NW LSL RA +    L K   +  R+    G       
Sbjct: 309 SGKILVTGYSDNLPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKA-EGRGESNPV 367

Query: 322 IASDP--MNSANRRIDILVE 339
             ++     + NRR++I + 
Sbjct: 368 APNNSKVNRALNRRVEITLL 387


>gi|253771615|ref|YP_003034446.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254163475|ref|YP_003046583.1| putative outer membrane lipoprotein [Escherichia coli B str.
           REL606]
 gi|297520666|ref|ZP_06939052.1| putative outer membrane lipoprotein [Escherichia coli OP50]
 gi|300928223|ref|ZP_07143762.1| OmpA family protein [Escherichia coli MS 187-1]
 gi|242379069|emb|CAQ33870.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
 gi|253322659|gb|ACT27261.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975376|gb|ACT41047.1| predicted outer membrane lipoprotein [Escherichia coli B str.
           REL606]
 gi|253979532|gb|ACT45202.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
 gi|300463768|gb|EFK27261.1| OmpA family protein [Escherichia coli MS 187-1]
          Length = 219

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|305665009|ref|YP_003861296.1| OmpA/MotB protein [Maribacter sp. HTCC2170]
 gi|88707423|gb|EAQ99668.1| OmpA/MotB [Maribacter sp. HTCC2170]
          Length = 404

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 9/145 (6%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVL- 259
           L      + V+           LI + +       +F       L +    L ++  +L 
Sbjct: 261 LESAEPADFVQNPTAIRNNDRNLIVLNETHLFENVLFHFDKYDLLGQAKNELDRVYRILE 320

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             S+  ISI GHTD+         N  LS  RA S     ++ G+S +RI   +G     
Sbjct: 321 NDSSLSISIYGHTDSV---GAESYNLELSKLRAKSVANYFVELGLSSNRIKS-TGKGSSE 376

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
              ++   N    NRR++ ++ +++
Sbjct: 377 PIASNASENGRKMNRRVEFVLSNKK 401


>gi|320106074|ref|YP_004181664.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319924595|gb|ADV81670.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
          Length = 524

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 98/279 (35%), Gaps = 16/279 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
             ++ P     +  +    D+ +  ++  +        E + +           +  + +
Sbjct: 247 ADHYAPDIMAQVRTNLKNADDMDGSKKRDEKMEITYAREAVQRAEDARLSSIRKRIAEER 306

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + E +    + +Q  +    +     +  K   ++     +  + +       +      
Sbjct: 307 QAEVDARQTAEAQAQQSAMAAQQSQLDAAKAQAEAERSAAAKAQADAQRAQAEAAAANAN 366

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                  + + K     L   + D +   +  + T  G+++S+ D     +FD       
Sbjct: 367 ASADAAREAVVK-----LRQQMRDQLNSILATKETPRGLVVSLSD----VLFDTGKYTLK 417

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            +T + L K+  ++A   +  + + G+TD+         N +LS +RA S    L+ + V
Sbjct: 418 GDTKISLAKVAVIVASHPDLKLQVEGYTDSV---GSDDLNQKLSENRANSVKAFLIANSV 474

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +   I+ + G+        +      + NRR+++++   
Sbjct: 475 NPGNITSL-GYGKSHPVADNGTSAGRAQNRRVELVISGP 512


>gi|238782805|ref|ZP_04626834.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970]
 gi|238716228|gb|EEQ08211.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970]
          Length = 296

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 3/197 (1%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E+                ++   +   +  K+   K+   LQ   +K+   +     
Sbjct: 38  AQGERVSLSDSPIPGGGDDFAKQEGEVFRQTLNKLDERKQSLNLQRAHQKLKDLIKNDPR 97

Query: 209 -DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
             N    +    T  G+LI +ID +  PMF   S    P    +LQ +  VL      IS
Sbjct: 98  LSNYKSNLRLSLTEDGLLIQVIDSQERPMFKVGSKELEPYMRGILQALVPVLNDLPNKIS 157

Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + GHTD+ P+        NW LS DRA ++ Q L+  G++E++  ++ G A+        
Sbjct: 158 LTGHTDSLPYARGEVGYSNWELSADRANASRQTLVAGGLAENKFLRVIGTANMMNLENVR 217

Query: 326 PMNSANRRIDILVEDRQ 342
           P +  NRRI ILV  + 
Sbjct: 218 PDDPINRRISILVLSKN 234


>gi|206977733|ref|ZP_03238624.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
 gi|217961995|ref|YP_002340565.1| flagellar motor protein MotB [Bacillus cereus AH187]
 gi|222097978|ref|YP_002532035.1| flagellar motor protein motb [Bacillus cereus Q1]
 gi|206744034|gb|EDZ55450.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
 gi|217067135|gb|ACJ81385.1| chemotaxis protein MotB [Bacillus cereus AH187]
 gi|221242036|gb|ACM14746.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus Q1]
 gi|324328404|gb|ADY23664.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 261

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+               +       K+   A  +++ + +L  
Sbjct: 52  KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 111

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +  + +      + T  G+ ++I++     +FD   +    E++ + +++  
Sbjct: 112 VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 168

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +   + S + G
Sbjct: 169 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 227

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 228 YGEYRSIAPNDTQEGKAKNRRVEVFIL 254


>gi|238751686|ref|ZP_04613175.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
 gi|238710096|gb|EEQ02325.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
          Length = 575

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S     +  VL      +       I + GHTD       ++ N  LSL 
Sbjct: 440 DSLSLFDVGQSTLKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGESKSNQILSLK 496

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S    +  +G   +    + G+   R    +D     + NRR++I +
Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKPNDTETGRALNRRVEISL 546


>gi|90021170|ref|YP_526997.1| hypothetical protein Sde_1523 [Saccharophagus degradans 2-40]
 gi|89950770|gb|ABD80785.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 469

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 7/146 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              + L  +     +  +   T   I + +Q    +F   +    P    +L KI + L 
Sbjct: 319 ELRALLTPEIDRGILSVQDYPTHTSIVLHNQE---LFTSGNINITPSFEPILDKIAKALE 375

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                I + GHTD    R      NW LSL RA    + L  S   + R+    G   + 
Sbjct: 376 AIPGRIIVSGHTDNESIRTPRYPSNWHLSLARASEVVKYLAASADLKSRLLP-EGRGANE 434

Query: 320 LKIASDPMNSA--NRRIDILVEDRQG 343
             +++D       NRR+ I V   QG
Sbjct: 435 PIMSNDTAAGRAHNRRVVIDVYYHQG 460


>gi|4530367|gb|AAD22006.1| major outer membrane protein [Pseudomonas fluorescens]
          Length = 344

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+    +   ++ + + +        ++ GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330
           D+         N +LS  RA +  QVL    GV   R+  + G+   R    +       
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATDAGRA 330

Query: 331 -NRRIDILVED 340
            NRR++  VE 
Sbjct: 331 VNRRVEAQVEA 341


>gi|238799328|ref|ZP_04642769.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
           43969]
 gi|238716817|gb|EEQ08692.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
           43969]
          Length = 574

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S     +  VL      +       I + GHTD       ++ N  LSL 
Sbjct: 439 DSLSLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDSQSNQILSLK 495

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    +  +G   +    + G+   R   ++D       NRR++I +
Sbjct: 496 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 545


>gi|261341826|ref|ZP_05969684.1| hypothetical protein ENTCAN_08313 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316202|gb|EFC55140.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 220

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL   ++  +++ G+TD++        N RLS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYSKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|327480138|gb|AEA83448.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
          Length = 200

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   ++   +Q + + +    +  ++  GHTD+         N RLS  RA + 
Sbjct: 95  FDFDRDVVKQDSYSDIQNLADFMKEYRQTTTVLEGHTDSV---GTDAYNQRLSERRANAV 151

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +VL+   GV  +R++ + G+   R    +        NRR++  VE R 
Sbjct: 152 RRVLVDELGVEGNRVNAV-GYGESRPVADNSTEEGRAINRRVEAEVEARP 200


>gi|323498434|ref|ZP_08103430.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
 gi|323316507|gb|EGA69522.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
          Length = 322

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  T  F  +S+   PE+   L K+ + L    +  + + G+TD       A  N  +S 
Sbjct: 207 QLGTGSFKLNSTELNPESASQLDKLVDFLNTYPQATVEVIGYTDT---SGAASYNQMISE 263

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA S    L   GV   RIS   G   +    ++        NRR++++V
Sbjct: 264 KRAQSVAAALEAKGVDASRISA-KGEGENDPIASNATREGREMNRRVEVIV 313


>gi|284039490|ref|YP_003389420.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283818783|gb|ADB40621.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 361

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F++SS I +PE+   L+K+   +  +    I + GHTD        R N  LS +R
Sbjct: 256 HQVQFEQSSYILVPESSAELEKLVRAMKENPLRSIDVSGHTDNV---GDPRLNLALSENR 312

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A      L + G+++DRI+ I G+   R    ++     + NRR++I + 
Sbjct: 313 AKVVASYLKRRGIADDRITTI-GYGGTRPIGNNNTEGERAKNRRVEITIR 361


>gi|330502930|ref|YP_004379799.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328917216|gb|AEB58047.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 267

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 92/251 (36%), Gaps = 12/251 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
               + ++ + +  +  +    +        ++ I    +  ++E   +      +    
Sbjct: 19  SNQPAGEQALEEARLSFQSVKEDPNVLRAAPKDVIRAGESLARAERLSSYWGSGDDVRHY 78

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGV 215
              S    +   +  +  L      K+   +++ +L     K+ S        +  +  +
Sbjct: 79  AYLSQRYAEIARQHSDISLNHERAAKLELERQRLQLTLREAKLLSVQQHNGWLEEQMVSL 138

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
               T  G+++++ D     +FD   +   P     + K+ + L  + +    I G+TD 
Sbjct: 139 ATSETERGLVMTLGDM----LFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDN 194

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           +     A +N  LS  RA +   +L+  GV   RI ++ G+        +      + NR
Sbjct: 195 T---GDAAENLELSRARAQAVADLLVDLGVDAKRI-QVVGYGVDFPVAENASARGRAQNR 250

Query: 333 RIDILVEDRQG 343
           R++I+  D +G
Sbjct: 251 RVEIVFSDERG 261


>gi|255530097|ref|YP_003090469.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343081|gb|ACU02407.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 263

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                 N +          GI++      +  +F    S    +    ++ +   L    
Sbjct: 118 QAAEIQNAIPNAEVIREGEGIIVKF---DSGILFGFDKSDLTAQAKTNIKSLAGSLNQYP 174

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I + GHTD    +     N  LS  RA +     +  GV   R+  I G        
Sbjct: 175 GTDIKVIGHTDN---KGTEAYNMGLSERRAAAVKAYAVSQGVPSSRLITI-GKGFSEPIE 230

Query: 323 ASDPM--NSANRRIDILV 338
            +      +ANRR+++++
Sbjct: 231 DNSTEAGRAANRRVEVVI 248


>gi|91201036|emb|CAJ74094.1| hypothetical protein kuste3333 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 395

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+        E    L  I +VL  + +  I I GHTD        + N  LS  RA + 
Sbjct: 293 FEYKKWDIKEEFESNLTNIVDVLEKNPDLQIRIEGHTDNI---GSMKYNIDLSQKRALAV 349

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L++ G+ E RIS  +GF        +        NRR +I+
Sbjct: 350 KDYLVEKGIHESRIST-TGFGFKHPIAPNVTEEGRALNRRAEIV 392


>gi|302187874|ref|ZP_07264547.1| ompA family protein [Pseudomonas syringae pv. syringae 642]
          Length = 260

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E        ++ +        +      D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLAKAEQAFRNDDDVQKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             ++        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTSQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   RI  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRADSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250


>gi|289807272|ref|ZP_06537901.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 135

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             S      +   +  +  + G+ I IID +N PMF   S+   P    +L+ I  VL  
Sbjct: 3   IESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNG 62

Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               IS+ GHTD  P+ N      NW LS DRA ++ + L+  G+   ++ ++ G A   
Sbjct: 63  IPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 122

Query: 320 LKIASDPMNSANR 332
                 P ++ NR
Sbjct: 123 RLSDRGPDDAINR 135


>gi|149376619|ref|ZP_01894379.1| Flagellar motor protein [Marinobacter algicola DG893]
 gi|149359137|gb|EDM47601.1| Flagellar motor protein [Marinobacter algicola DG893]
          Length = 260

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 5/188 (2%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +  + S +  ++   +        E+    P     +  +M  + R + L       
Sbjct: 55  GVFNAPQRSFQPIEVGDQSRRSTPQAAEDVINPPVTEAPQNPSMNAEGRTEALRAMADQL 114

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                       V  ET+   + +S+   RN+ +F    + P  +   V++KI  VL + 
Sbjct: 115 ALEFDELINQGVVTLETSDEWLELSL---RNSLLFGSGDAEPHYDAFDVVEKIAAVLRNR 171

Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I + G TD  P    A   NW LS  R+ +  ++L   GV  +R++ + G+  H+  
Sbjct: 172 DNAIRVEGFTDNRPINTSAFPSNWELSAARSAAVVRMLSMEGVEAERLAAV-GYGEHQPV 230

Query: 322 IASDPMNS 329
             +D    
Sbjct: 231 ARNDTEEG 238



 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            DD  +N   W I YADF+T+L AFF+VM+ +++ ++   K + +           + + 
Sbjct: 7   QDDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLTGVFNAPQRSFQP 66

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
           I         + Q   D  I+  +T+   +  + +  + +  + + + +    +   ++ 
Sbjct: 67  IEVGDQSRRSTPQAAED-VINPPVTEAPQNPSMNAEGRTEALRAMADQLALEFDELINQG 125

Query: 143 CKNSLTRDS 151
                T D 
Sbjct: 126 VVTLETSDE 134


>gi|149374667|ref|ZP_01892441.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
 gi|149361370|gb|EDM49820.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
          Length = 271

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 100/277 (36%), Gaps = 20/277 (7%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N      ++ S  +    + P+ +++     +  E I  +    + G    +   ++L  
Sbjct: 5   NMTLGMAVSVSVLVAGCASTPQDNAKVDEARAAYEEIRNDPNVARSGDRQLRSAREQLSR 64

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               L++       +++    +   +   +  +  +   + ++        E  +     
Sbjct: 65  AESLLADGADIAEIEHAAYLANRHAQIAGEQGERAELQEQIDSAEARRKELELEMRADEA 124

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            + +  AK++   +  + A+   +G++                   +FD   +       
Sbjct: 125 AQARREAKELRLQMEAMQAEQTDRGMVLT-------------LGDVLFDLDKAELKSSGE 171

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             ++++ E +A        + G+TD++     A  N  LS  RA +    L++ G+S  R
Sbjct: 172 ATVRRLAEFMAEYENRRVRVEGYTDST---GEASYNQGLSERRAQAVSDTLIEMGISRTR 228

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           +    GF       ++D       NRR++I++ D +G
Sbjct: 229 VET-KGFGEQFPVASNDTSGGRQQNRRVEIVISDEEG 264


>gi|161524037|ref|YP_001579049.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189351202|ref|YP_001946830.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
 gi|160341466|gb|ABX14552.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189335224|dbj|BAG44294.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
          Length = 214

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  S+ G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVIGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVAGNRLSA-QGMGPSNPVADNSTEAGRAQNRRVEIYLRAPQ 212


>gi|328554593|gb|AEB25085.1| flagellar motor protein MotS [Bacillus amyloliquefaciens TA208]
          Length = 206

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 14/187 (7%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +      +          P S  K      +  L      + +  + +   ++   +  
Sbjct: 26  AEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLL------LQNVKTYIKTYHLSSKMTA 79

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
           +    G+++ + +     +F    +  L     VL +I  +L      I + GHTD+   
Sbjct: 80  KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136

Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
                  NW LS  RA S  +        S  R   + G+A  +    +  +     NRR
Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISV-GYADTKPVKDNKSIRHMKENRR 195

Query: 334 IDILVED 340
           ++I+++ 
Sbjct: 196 VEIVIKK 202



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 29/58 (50%)

Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           + +AD +T+++ FF++++ ++  D +  ++     +  G     AS    +E +  +
Sbjct: 1  MVTFADLITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQD 58


>gi|301309047|ref|ZP_07214992.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
 gi|300833073|gb|EFK63698.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
          Length = 277

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 50  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 110 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264


>gi|283853608|ref|ZP_06370844.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283570999|gb|EFC19023.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 345

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    +  ++  L+E     I++       +  FD       PE + VL++   ++   T
Sbjct: 214 NEAAREKFLECALYEWIEDEIVV-----FRSIYFDFDKYNIKPEFVPVLEEGTAIIKSKT 268

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            +  +  GHTD+       + N +L   RA S     +K G+   RI  IS F       
Sbjct: 269 GMKVVLEGHTDSV---GSDQYNMKLGQRRADSVKAFFVKKGIDASRIETIS-FGESDPVA 324

Query: 323 ASDPM--NSANRRIDI 336
            +      + NRR  I
Sbjct: 325 TNKTAQGRALNRRCVI 340


>gi|221199341|ref|ZP_03572385.1| ompA family protein [Burkholderia multivorans CGD2M]
 gi|221205757|ref|ZP_03578772.1| ompA family protein [Burkholderia multivorans CGD2]
 gi|221211556|ref|ZP_03584535.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
 gi|221168917|gb|EEE01385.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
 gi|221174595|gb|EEE07027.1| ompA family protein [Burkholderia multivorans CGD2]
 gi|221180626|gb|EEE13029.1| ompA family protein [Burkholderia multivorans CGD2M]
          Length = 214

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  S+ G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVIGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVAGNRLSA-QGMGPSNPVADNSTEAGRAQNRRVEIYLRAPQ 212


>gi|91213065|ref|YP_543051.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
 gi|117625836|ref|YP_859159.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
 gi|218560629|ref|YP_002393542.1| outer membrane lipoprotein [Escherichia coli S88]
 gi|306816094|ref|ZP_07450232.1| putative outer membrane lipoprotein [Escherichia coli NC101]
 gi|331649382|ref|ZP_08350468.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
 gi|91074639|gb|ABE09520.1| putative outer membrane protein [Escherichia coli UTI89]
 gi|115514960|gb|ABJ03035.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218367398|emb|CAR05180.1| putative outer membrane lipoprotien [Escherichia coli S88]
 gi|281180597|dbj|BAI56927.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294489870|gb|ADE88626.1| OmpA family protein [Escherichia coli IHE3034]
 gi|305850490|gb|EFM50947.1| putative outer membrane lipoprotein [Escherichia coli NC101]
 gi|307628634|gb|ADN72938.1| putative outer membrane lipoprotein [Escherichia coli UM146]
 gi|323949796|gb|EGB45680.1| OmpA family protein [Escherichia coli H252]
 gi|330909615|gb|EGH38129.1| outer membrane protein A precursor [Escherichia coli AA86]
 gi|331041880|gb|EGI14024.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
          Length = 219

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|317133447|ref|YP_004092761.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
 gi|315471426|gb|ADU28030.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
          Length = 259

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 8/203 (3%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           ++  K S   ++ +         +++S   +                +   ++QD +   
Sbjct: 37  TDVQKASQVAEAIRKGFNASQQAVQQSPVSQNTNSTNITMSNTSTTSEVISQVQDWSSLY 96

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 +    + K V   +T  G++I++ D     ++   S++       ++ +IG+ L
Sbjct: 97  DQVTKLVAQAGLQKNVDLSSTSKGLVITLKDNT---LYTPGSAVMNQPGQDLVLRIGDAL 153

Query: 260 AHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                  I + GHTD+ P  N    DN  LS  RA +  + L+  G+   +I    G   
Sbjct: 154 KQVNYALIIVEGHTDSDPIHNAQFQDNIELSSARADNVERALIGRGLDAAKI-AAMGRGD 212

Query: 318 HRLKIASDPMN--SANRRIDILV 338
                 +D     + NRR+ I +
Sbjct: 213 TVPVAPNDTPANKAKNRRVVITI 235



 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 32/87 (36%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                 +N   W + Y+D M +L+  F++++ ++ TD      + +           A +
Sbjct: 2   KRPPEKDNSERWLLPYSDLMNLLLILFIILYAMSKTDVQKASQVAEAIRKGFNASQQAVQ 61

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITK 108
                QN    +       +  E I++
Sbjct: 62  QSPVSQNTNSTNITMSNTSTTSEVISQ 88


>gi|220933311|ref|YP_002512210.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994621|gb|ACL71223.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 218

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L  +    GV        +++++        FD +      E   VL  + 
Sbjct: 77  NYMDQQEAELRRELEGTGVSVTRDGDNLILNM---PGNITFDVNRDEVKSEFYPVLNSVA 133

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +VL    +  I + GHTD++        N  LSL RA S    L+  G+   RI+ I GF
Sbjct: 134 KVLKKYDKTAIEVAGHTDST---GTVEHNMALSLRRADSVAGYLLGQGIQNVRIATI-GF 189

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
             HR    ++       NRR+++ +
Sbjct: 190 GPHRPIADNNTAQGRSLNRRVELTL 214


>gi|146307724|ref|YP_001188189.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145575925|gb|ABP85457.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 270

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 84/245 (34%), Gaps = 14/245 (5%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
                +     +       E+     +  +       SL R            D+     
Sbjct: 24  QPGSEQALEAARASFQSVKEDPNVLRAAPKDVIRAGESLARAERLSSYWGSGADVRHYAY 83

Query: 169 KEE-------NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
             +        +    L++E+   ++ +++   L  + +  LS    +  ++  +     
Sbjct: 84  LSQRYAEIARQHSDSSLNQERAAKLELERQRLQLTLREAKLLSVQQHNGWLEEQMVSLAT 143

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
           +     ++      +FD   +   P     + K+ + L  + +    I G+TD +     
Sbjct: 144 SETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDNT---GS 200

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +N  LS  RA +   +L+  G+   RI ++ G+        +      + NRR++I+ 
Sbjct: 201 AEENLELSRARAQAVADLLVDLGIDAKRI-QVVGYGVDFPVAENASARGRAQNRRVEIVF 259

Query: 339 EDRQG 343
            D +G
Sbjct: 260 SDERG 264


>gi|332701239|ref|ZP_08421327.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332551388|gb|EGJ48432.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 282

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 78/233 (33%), Gaps = 14/233 (6%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
                 +     +  + +           ++     +     ++   K   +        
Sbjct: 59  PVPGPNEDEPGVRTVEGEVTRITYELKEGARLVAPLQILRNYENALKKLGGEVFYRYDKF 118

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
                      +   ++ ++   +  +L   + S ++  VA   ++          + + 
Sbjct: 119 TMAGKAPKDGRTVYLLIDVRNDGQTYELTALVVSDMAQEVALGSLEMYEKLEQDGRLALY 178

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I        FD   S   PE+  ++ +I +++  +    I + GHTD       A  N +
Sbjct: 179 IN-------FDTGKSTIKPESRTIVDEIAKMMQENAGLKIKVEGHTDNQ---GGAESNQK 228

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           LS  RA +  + ++  G+S  R+    G    +      ++   + NRR++++
Sbjct: 229 LSEARAKAVVEAILAKGISASRLKPA-GHGQTKPIADNKNEEGRAKNRRVELV 280


>gi|327395890|dbj|BAK13312.1| inner membrane lipoprotein YiaD precursor [Pantoea ananatis
           AJ13355]
          Length = 237

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 97  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSSLKPAGANTLTGVAM 153

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ GHTD++        N RLS  RA S    L+  GV+ DR+    G  
Sbjct: 154 VLKEYPKTAVNVVGHTDST---GSRALNMRLSQQRAESVASALIVQGVASDRLHT-RGAG 209

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 210 PDSPVATNSTEAGKAQNRRVEITL 233


>gi|313675999|ref|YP_004053995.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312942697|gb|ADR21887.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 671

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 15/298 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH---ITKNS 110
           + A D     +   Y      ++    +     QN  E  +      S  +         
Sbjct: 378 LAADDKTLFFSSSGYIGFGKNDIYMTRRLDDTWQNWSEPYNMGPQVNSSGDDLFFSMPAE 437

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            +    +         +      L N        +    D E  K L      E     E
Sbjct: 438 GNFAYYTKEDSVGDMNIYRLPMPLFNELDPVITISGRVVDMETQKPLAAIVSYETQDGVE 497

Query: 171 ENY-FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                  P + E  + +   +  Q +AK           D   +          I+  I 
Sbjct: 498 VGKVETDPTTGEYEITLPAGQEYQYIAKVKGYLPISENVDLTNQKESKSFNNDMIMAPIK 557

Query: 230 DQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
           ++    +    F   S   L  +   L ++ EV+  ++++ + I GHTD++        N
Sbjct: 558 EKAEIVLNNVFFAFDSHELLGSSKSELNRMVEVMNDNSQIEVVIIGHTDST---GPEEYN 614

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             LS  RA S    L ++G+ E+R+  + G   +     +D     + NRR++  VE 
Sbjct: 615 QVLSEKRAQSVVNYLTQNGIDEERLEYL-GKGENEPAYPNDTRENRAKNRRVNFKVER 671


>gi|311106926|ref|YP_003979779.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
 gi|310761615|gb|ADP17064.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
          Length = 199

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +   P     L+ I  ++  S+   ++I GHTD+   +  A  N  LSL R
Sbjct: 86  GDVLFDFDKTAIRPAAEPTLRDIASLIKASSAGTVAIEGHTDS---KGSASYNKDLSLRR 142

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILV 338
           A +  Q L   GV + R+  + G    +            +    + NRR++ ++
Sbjct: 143 AQAVAQWLTSHGVDKARL-TVKGLGDTQPIQSNRLANGADNPQGRAQNRRVEFVL 196


>gi|301063232|ref|ZP_07203781.1| OmpA family protein [delta proteobacterium NaphS2]
 gi|300442660|gb|EFK06876.1| OmpA family protein [delta proteobacterium NaphS2]
          Length = 214

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 19/193 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               + L          ++ E     PL+       K +       K +         + 
Sbjct: 31  GGITESLLSPEKARPIDSQSEAGEWQPLNAGDASKDKTQPVKTRSIKVLKKEKGVDTWET 90

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVIS 267
           +            + I          FD +S    PE+  +L+++G+ LA       +I 
Sbjct: 91  VNAPEKRTGGFVNLKIE---------FDVNSYTIRPESYNLLRELGKALADPRLRDRIII 141

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326
           I GHTD+       + N RLSLDRA +    L+   GV+ DR+ ++ G+        +  
Sbjct: 142 INGHTDSD---GKEKYNVRLSLDRAAAVKTYLIDHCGVAPDRL-EVVGYGESMPLTPNTS 197

Query: 327 MN--SANRRIDIL 337
                 NRR++I+
Sbjct: 198 KENKQLNRRVEIV 210


>gi|269137375|ref|YP_003294075.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
 gi|267983035|gb|ACY82864.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
 gi|304557476|gb|ADM40140.1| Outer membrane protein [Edwardsiella tarda FL6-60]
          Length = 219

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GVS  RI  I G  
Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALIVQGVSAGRIRTI-GMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PANPIATNSTAAGKAQNRRVEITL 216


>gi|262194690|ref|YP_003265899.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
 gi|262078037|gb|ACY14006.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
          Length = 1793

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 231  QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            Q    +F+ +S +   E+   L  +   L  +    + I GHT +      AR N RLS 
Sbjct: 1677 QVGKILFEFNSGVIKEESFPELDSVVRKLQSNPAVHLLIEGHTSSE---GSARYNRRLSG 1733

Query: 290  DRAYSAYQVLMKSGVSEDRISKISGFAHHR-LKIASDPMNSA--NRRIDILVEDRQ 342
             RA S  + L++ GV  +R++   G    + L    D   +   NRR++  +   +
Sbjct: 1734 VRAASVRKYLVEHGVEANRLAS-KGVGEAQLLIAPDDTEEARETNRRVEFTITRGR 1788



 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 72/270 (26%), Gaps = 18/270 (6%)

Query: 78   TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                       P   +     D           +    GS       +     +   + +
Sbjct: 1412 PGEAKYHGCPAPTVVTDTCSADSGRGAVRVAPELAFVPGSALLSLPSRVPLEALAERAAA 1471

Query: 138  QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            +        +     +     +  D   +    +   L  +S                  
Sbjct: 1472 EPELLVAIDVGGAGAEPGLAQRRADAVAAFLASKGVDLGQVSVLGRGDAASV-------- 1523

Query: 198  KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                  +  V            T     + I D      ++ +S+     +  +L++   
Sbjct: 1524 GADDAATYPVRFERRCPSEIPPTTLCKELEIGDDFKIA-YELNSANLQAASKEMLERDVL 1582

Query: 258  VLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +  +   I +   GHT           N  LS  RA S    L++ G+  +R+S + G 
Sbjct: 1583 WILRAHPQIRVEVQGHTSGE---GKLAYNMELSQRRAQSVVDFLVEHGIEGERLSAV-GH 1638

Query: 316  AHHRLKIA---SDPMNSANRRIDILVEDRQ 342
                  +    S+     NRRI+  ++ R+
Sbjct: 1639 GPKVPLVTPENSEADRERNRRIEFSIQPRR 1668


>gi|261251362|ref|ZP_05943936.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
 gi|260938235|gb|EEX94223.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
          Length = 329

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 9/131 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             V  +  ++     + D+       FD  SS     +   L ++   L    E  + + 
Sbjct: 195 PMVTEQHPQSITKSEMFDKVTLSSGPFDSESSELNESSSQQLSQLVATLKEYPEAKVEVV 254

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD++     +  N  LS+ RA      L   G+   RI  I G    +    +     
Sbjct: 255 GHTDST---GSSSYNQALSIQRATEVSNFLESEGIDSSRI-SIDGHGETQPIAPNSTSQG 310

Query: 328 NSANRRIDILV 338
            + NRR+++ +
Sbjct: 311 RANNRRVEVTI 321


>gi|150007860|ref|YP_001302603.1| OmpA family outer membrane protein [Parabacteroides distasonis ATCC
           8503]
 gi|262381639|ref|ZP_06074777.1| outer membrane protein [Bacteroides sp. 2_1_33B]
 gi|298376779|ref|ZP_06986734.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
 gi|301310112|ref|ZP_07216051.1| lipoprotein PG3 [Bacteroides sp. 20_3]
 gi|149936284|gb|ABR42981.1| outer membrane protein, OmpA family [Parabacteroides distasonis
           ATCC 8503]
 gi|262296816|gb|EEY84746.1| outer membrane protein [Bacteroides sp. 2_1_33B]
 gi|298266657|gb|EFI08315.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
 gi|300831686|gb|EFK62317.1| lipoprotein PG3 [Bacteroides sp. 20_3]
          Length = 227

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  +SS     +   L+     L  + +  I I G TD +        N  LS  
Sbjct: 106 DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 162

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S Y  LM  GVS DR+    G   H    ++D       NRR++I++   Q
Sbjct: 163 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 215


>gi|238924159|ref|YP_002937675.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
 gi|238875834|gb|ACR75541.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
          Length = 275

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 10/209 (4%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
               +      L        +       + + +K           +       +  L + 
Sbjct: 60  PGGSTSIGDGRLVGAGVSQLEFLDKYYNDLANSKSTTESTTEGDDKNAEEQYEQMELSES 119

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K        L   ++   V  +     + +S+       +F+   +  + E   V+ KI
Sbjct: 120 EKMSEQIEKQLENTSLQDAVEVDFNAQYVQLSLN---GALLFESGKADVMEEAYPVVNKI 176

Query: 256 GEVLAHST-EVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
             +LA     +I I GHTD  P  +      N  LS+ RA S    +  +  ++   I  
Sbjct: 177 SSILAAYQDNLIEIEGHTDNVPVSSRSKYESNDVLSMYRALSVANYIRDNTSLNPAHIKS 236

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
            SG   +     +      + NRR++I V
Sbjct: 237 -SGRGDYDPVADNSTPEGRARNRRVEIKV 264


>gi|110833683|ref|YP_692542.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
 gi|110646794|emb|CAL16270.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
          Length = 384

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 86/278 (30%), Gaps = 12/278 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +  G +      GI   +   E +S +  D +      +      +          R   
Sbjct: 104 HFAGNSAFEPYVGIGAGELRFEPTSNSSDDNAETIGTLETGFQTLLHPHFLLDVGARPYY 163

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +        +     N L   S   ++     ++    + +                +  
Sbjct: 164 SFDAERWDAEVYAGLNFLIGGSSNEQEPAPIENVVTDSDGDGVPDDRDQCANTPAGAQVD 223

Query: 190 K---RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                L D    I +++           V  +  +  +   + +      F    +    
Sbjct: 224 ATGCELDDDNDSIVNSMDDCPNTPAGALVDDKGCQKYLEKDVKETL-YVEFGHDKTEVRQ 282

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
            +   L+ + E +        +  GHTD++     A  N +LS  RA +   VL+   GV
Sbjct: 283 TSYPSLENLAEDMRQYPSANLVLEGHTDST---GSAAYNKKLSQQRADAVKAVLVDKFGV 339

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           S DRI+ + G+   +    +      + NRR++ +++ 
Sbjct: 340 SADRITTV-GYGEEKPISDNKTSEGRAENRRVETILKA 376


>gi|167580182|ref|ZP_02373056.1| ompA family protein [Burkholderia thailandensis TXDOH]
 gi|257139912|ref|ZP_05588174.1| ompA family protein [Burkholderia thailandensis E264]
          Length = 215

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|71734248|ref|YP_276006.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257487118|ref|ZP_05641159.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289626062|ref|ZP_06459016.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646239|ref|ZP_06477582.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488307|ref|ZP_07006339.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|71554801|gb|AAZ34012.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298157129|gb|EFH98217.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320323146|gb|EFW79235.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329582|gb|EFW85571.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330867556|gb|EGH02265.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330878322|gb|EGH12471.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330892526|gb|EGH25187.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
 gi|330985082|gb|EGH83185.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009256|gb|EGH89312.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 260

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
            TK + +L+   +N        E        ++ +        +      D+ K   L  
Sbjct: 21  ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+        ++     A  +         ++ +         +   +  + T  G L
Sbjct: 81  LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           ++  D     +FD + +   P     + K+   L  + +    + G+TD++     A  N
Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
             LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ + +  
Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250


>gi|115376409|ref|ZP_01463646.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115366616|gb|EAU65614.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 723

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 14/255 (5%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P    +           + +  + L  G     +           LS S  ++    + T
Sbjct: 479 PLPGGAIRIAIQKDGYRLAERDLTLVPGQPQTVEVALESMAQPATLSFSTTAQKKPVAAT 538

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                 +    +T                +       + + + +Q       S    L  
Sbjct: 539 LRLSGPQKQELATSAAAPTKLVLPPGHYLVDVMAPGYLAQTREVQVAEGTAQSFAFDLKP 598

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267
               K V     +  +L  +        F    ++    +  +L ++ +V+  ++ + + 
Sbjct: 599 APKKKLVTVADNKLALLQQVQ-------FADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 651

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           +  HTD          N +LS +RA +    L +SG+   R+ ++ G+   R    +   
Sbjct: 652 VEAHTDNQ---GNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTP 707

Query: 328 NSA--NRRIDILVED 340
                NRR++ ++ +
Sbjct: 708 RGKELNRRVEFIILE 722


>gi|312959441|ref|ZP_07773958.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311286158|gb|EFQ64722.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 231

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 11/148 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K +    +G         V          I I D      F   S+         L  I 
Sbjct: 91  KGMQVDANGCPPAPPAAAVEEMAVVKEETIVIRDVH----FQFDSANLTTADKTTLDTIA 146

Query: 257 EVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             L     +  + + GHTD+         N +LS  RA+S  + L+  GV       + G
Sbjct: 147 ARLKQEAPSAQLRVSGHTDSV---GADAYNQKLSQKRAHSVTEYLISRGVPRSSFVSVVG 203

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVED 340
               +    +        NRR  I +  
Sbjct: 204 AGESQPVADNKTAEGRALNRRTQIQINR 231


>gi|269968226|ref|ZP_06182255.1| putative lipoprotein [Vibrio alginolyticus 40B]
 gi|269827149|gb|EEZ81454.1| putative lipoprotein [Vibrio alginolyticus 40B]
          Length = 281

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L    +  GV  +      L  ++   N   F  SS          L+ +  +L
Sbjct: 142 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 199

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  G+TD++        N  LS  RA S  Q L+   V+  R     G+   
Sbjct: 200 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-RGYGER 255

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I + 
Sbjct: 256 NPICSNQTSEGRACNRRVEIQIL 278


>gi|171060845|ref|YP_001793194.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170778290|gb|ACB36429.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 229

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 16/155 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           KR++D  K + +   G   D      +  TT   + ++I        FD   S   P  +
Sbjct: 87  KRMEDKRKAMEAATQGTGID------VVRTTDNQLKVNIPAD---FSFDVGRSAVKPVMV 137

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            VL K+ + L  +T  + + GHTD+         N  LSLDRA +    L + GV   RI
Sbjct: 138 PVLDKLAQGL-DATVQVQVIGHTDS---SGSDAVNNPLSLDRAEAVRDYLSRHGVPAARI 193

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            ++ G         +      + NRR++I + + Q
Sbjct: 194 -QVEGRGEREPVADNATPDGRAQNRRVEIFLREPQ 227


>gi|157889006|dbj|BAF80954.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F        PE    +Q++G+VL  + +  +I  GHTD++        N +LSL+RA 
Sbjct: 222 GYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKVYNQKLSLERAK 278

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           +  + L KSGV++++I    G+   + K ++D     + NRR++
Sbjct: 279 AVAKELEKSGVAKEKI-AAKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|254229577|ref|ZP_04922989.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
 gi|151937860|gb|EDN56706.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
          Length = 269

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L    +  GV  +      L  ++   N   F  SS          L+ +  +L
Sbjct: 130 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 187

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  G+TD++        N  LS  RA S  Q L+   V+  R     G+   
Sbjct: 188 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-RGYGER 243

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I + 
Sbjct: 244 NPICSNQTSEGRACNRRVEIQIL 266


>gi|260552490|ref|ZP_05825866.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
 gi|260405297|gb|EEW98793.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
          Length = 217

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKIYLAGKGVSSSRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|37523008|ref|NP_926385.1| photosystem I P700 chlorophyll a apoprotein A2 [Gloeobacter
           violaceus PCC 7421]
 gi|68052682|sp|Q7NFT5|PSAB_GLOVI RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2;
           AltName: Full=PsaB
 gi|35214011|dbj|BAC91380.1| Photosystem I P700 chlorophyll A apoprotein A2 [Gloeobacter
           violaceus PCC 7421]
          Length = 872

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 13/117 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD   S    +    L ++  V+    +E + I GHTD+         N +LS +
Sbjct: 753 PENIVFDFDKSSVKLDADPALNRVVGVIQFYGSEPVEILGHTDSL---GEDAYNQKLSEE 809

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVE 339
           RA +      K G+  +R++   G+   +    +              NRR++IL++
Sbjct: 810 RASAVKAFFEKKGIEAERLTA-KGYGETKPVAPNAKPDGSDNPDGRQQNRRVEILIK 865


>gi|197364467|ref|YP_002144104.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197095944|emb|CAR61525.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 205

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 65  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 121

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 122 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 177

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 178 PANPIASNSTAEGKAQNRRVEITL 201


>gi|237736307|ref|ZP_04566788.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421655|gb|EEO36702.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
          Length = 203

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L        V        + + +        F  +S+         L  I  VL
Sbjct: 65  DNQEKELRERLKNTEVEVSREGDNLNLYL---PGGVTFATNSANIASNFYGPLNSIASVL 121

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E   +  G+TD +     A  N  LS  RA S     +  GV   R++ + G   +
Sbjct: 122 VQYPETRIVVNGYTDNT---GAASYNLDLSQRRANSVRDYFISQGVESYRVTSV-GHGIN 177

Query: 319 RLKIASDPM--NSANRRIDILVE 339
             +  +      + NRR++I + 
Sbjct: 178 NPRATNSTAAGRAENRRVEIQIL 200


>gi|194430954|ref|ZP_03063247.1| OmpA family protein [Shigella dysenteriae 1012]
 gi|194420409|gb|EDX36485.1| OmpA family protein [Shigella dysenteriae 1012]
 gi|332085980|gb|EGI91144.1| inner membrane lipoprotein yiaD [Shigella dysenteriae 155-74]
          Length = 219

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|237744908|ref|ZP_04575389.1| outer membrane protein [Fusobacterium sp. 7_1]
 gi|229432137|gb|EEO42349.1| outer membrane protein [Fusobacterium sp. 7_1]
          Length = 166

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +I+       FD   S+  P+   +L  + + +  +   ++I GHTD   +      N  
Sbjct: 28  TIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTD---YIASNAYNMG 84

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           LS  RA +    L++ G+   RI  I           +      + NRR++  +  R
Sbjct: 85  LSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFKLVKR 141


>gi|332668211|ref|YP_004450999.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332337025|gb|AEE54126.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 317

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 9/128 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +    GI I   ++     F+   S  +     +L     +L ++ E    I GHTD 
Sbjct: 196 YIQQDGEGIKIRFSEK---VSFETGKSELVAAADSILAITVRMLNYNPEAKCRIEGHTDD 252

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                 A+DN  LS  RA +    L   G+      ++ G+   +   ++        NR
Sbjct: 253 V---GNAKDNLLLSQSRAKAVATALKNRGIPTSVQLEVKGYGSTKPVASNSSAEGKSLNR 309

Query: 333 RIDILVED 340
           R+DI++E 
Sbjct: 310 RVDIVIEK 317


>gi|149909453|ref|ZP_01898108.1| outer membrane protein [Moritella sp. PE36]
 gi|149807563|gb|EDM67512.1| outer membrane protein [Moritella sp. PE36]
          Length = 214

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 9/207 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +  +   + + T   ++     KS                  +     A+        + 
Sbjct: 13  AALTGCARQNATTGEQETNTATKSAIGGAIAGALIGASTGKKNAALFGALGGAAIGGGIG 72

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L  + I  GV  +      L  I+ +     F  +      +    L  + 
Sbjct: 73  HYFDRQEEELRQELIGSGVQVKRVGENELQLIMAKGIG--FQTAGYNLSGDIYSSLNSVA 130

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L       + I GHTD+      A+ N  LS +RA S  + L K G+   R+S   G+
Sbjct: 131 KILNEYPKSSLRIVGHTDSV---GSAQSNLTLSEERAESVSEYLNKRGIKSGRLST-RGY 186

Query: 316 AHHRLKIASDP--MNSANRRIDILVED 340
              R   +++     +ANRR++I +  
Sbjct: 187 GERRPIASNETKSGRAANRRVEISITA 213


>gi|172059479|ref|YP_001807131.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171991996|gb|ACB62915.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 316

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153
               I     +   G      +          L   + +    N + +            
Sbjct: 74  TAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     E    +  + + Q LA  +++TL+      I  
Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNPTYT--IKN 191

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   L+        I GHT
Sbjct: 192 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 250

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D          N  LS  RA +    L+   +   +++  +G    +    +D     + 
Sbjct: 251 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 306

Query: 331 NRRIDILV 338
           NRRI+  V
Sbjct: 307 NRRIEFRV 314


>gi|308174663|ref|YP_003921368.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7]
 gi|307607527|emb|CBI43898.1| motility protein (flagellar motor rotation) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328912997|gb|AEB64593.1| motility protein (flagellar motor rotation) [Bacillus
           amyloliquefaciens LL3]
          Length = 206

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 14/187 (7%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +      +          P S  K      +  L      + +  + +   ++   +  
Sbjct: 26  AEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLL------LQNVKTYIKTHHLSSKMTA 79

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
           +    G+++ + +     +F    +  L     VL +I  +L      I + GHTD+   
Sbjct: 80  KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136

Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
                  NW LS  RA S  +        S  R   + G+A  +    +  +     NRR
Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISV-GYADTKPVKDNKSIRHMKENRR 195

Query: 334 IDILVED 340
           ++I+++ 
Sbjct: 196 VEIVIKK 202



 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 29/58 (50%)

Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           + +AD +T+++ FF++++ ++  D +  ++     +  G     AS    +E +  +
Sbjct: 1  MVTFADLITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQD 58


>gi|330828822|ref|YP_004391774.1| OmpA family protein [Aeromonas veronii B565]
 gi|328803958|gb|AEB49157.1| OmpA family protein [Aeromonas veronii B565]
          Length = 306

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLSGLVA 208
           + +    L  +     S+ +      P L+    +  ++    L  L  ++  ++  LV 
Sbjct: 70  EGQGNSLLDNAVSASPSLLESPASPSPSLAPISGVPVLQDGATLAKLDMQLQQSMGSLVD 129

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
                 V        + + +    +  +F   S+   P    V+  +  +L      + +
Sbjct: 130 ---AGIVKLTQDENWLTVEL---SSGLLFGSGSAFLGPNAAPVINTLSSILKPVDNYVRV 183

Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           RG+TD     N   R NW LS  RA +    L+  G++  R+     +        +   
Sbjct: 184 RGYTDNQQINNEIYRSNWALSAARAEAVLNGLIADGIAPQRL-AFEAYGEFSPFADNGSE 242

Query: 328 NSA--NRRIDILV 338
                NR++ + +
Sbjct: 243 QGRLQNRKVVVAI 255



 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 51/165 (30%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + K+         +L  W + YAD+MT++ A F+V++ +   + D  +A+    +     
Sbjct: 1   MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMSQAFSV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           + +   G+ + Q      +      S+ E     S  L   S     Q       +    
Sbjct: 61  MQSGGNGLLEGQGNSLLDNAVSASPSLLESPASPSPSLAPISGVPVLQDGATLAKLDMQL 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                      + + ++    L               +  P  + 
Sbjct: 121 QQSMGSLVDAGIVKLTQDENWLTVELSSGLLFGSGSAFLGPNAAP 165


>gi|52140989|ref|YP_085838.1| flagellar motor protein MotB [Bacillus cereus E33L]
 gi|51974458|gb|AAU16008.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus E33L]
          Length = 262

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANSQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255


>gi|315922614|ref|ZP_07918854.1| predicted protein [Bacteroides sp. D2]
 gi|313696489|gb|EFS33324.1| predicted protein [Bacteroides sp. D2]
          Length = 405

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+   S     +   L KI  ++  +   + I+GHTD          N  LS  RA + Y
Sbjct: 305 FEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNV---GKEDFNMELSRKRAKAVY 361

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             L+K GV   ++   + +   +   ++D       NRR++  ++
Sbjct: 362 DYLIKKGVGSSKL-SYTYYGMTKPIASNDTEEGRLINRRVEFEIK 405


>gi|262373228|ref|ZP_06066507.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
 gi|262313253|gb|EEY94338.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
          Length = 220

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L A     GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 79  YLDNKEKKLRAQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYGTLNKVAQ 136

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   GVS  RI    G  
Sbjct: 137 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLASQGVSSSRIDA-QGLG 192

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                 ++        NRR++I +  +Q
Sbjct: 193 SSNPIASNATAAGKEQNRRVEISIYAKQ 220


>gi|260174346|ref|ZP_05760758.1| OmpA/MotB domain-containing protein [Bacteroides sp. D2]
          Length = 375

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+   S     +   L KI  ++  +   + I+GHTD          N  LS  RA + Y
Sbjct: 275 FEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNV---GKEDFNMELSRKRAKAVY 331

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             L+K GV   ++   + +   +   ++D       NRR++  ++
Sbjct: 332 DYLIKKGVGSSKL-SYTYYGMTKPIASNDTEEGRLINRRVEFEIK 375


>gi|256842297|ref|ZP_05547801.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736181|gb|EEU49511.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 295

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 68  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 127

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 128 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 184

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 185 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 244

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 245 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 282


>gi|218514237|ref|ZP_03511077.1| outer membrane lipoprotein [Rhizobium etli 8C-3]
          Length = 141

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     G+        I++++        FD       P     L  +  VL
Sbjct: 1   DQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVAIVL 57

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +  +I + GHTD++      + N  LS  RA S    L   G+ + R+S + GF   
Sbjct: 58  RKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GFGPS 113

Query: 319 RLKIASDPM--NSANRRIDILV 338
           +   ++      + NRR++I +
Sbjct: 114 QPVASNASEAGRAQNRRVEIQI 135


>gi|89053531|ref|YP_508982.1| hypothetical protein Jann_1040 [Jannaschia sp. CCS1]
 gi|88863080|gb|ABD53957.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 799

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 94/291 (32%), Gaps = 16/291 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
                     L          +   + +  + +  +          ++++     + +  
Sbjct: 510 AASVASDLTALEAQLAAALAARQTTDAALADALTEAETRETLLAQANIELAEAETQSEQS 569

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             +  +     +       +  +  S       ++    +++    N  L  L+ E+   
Sbjct: 570 ARQVALLNEQVAALRAQLGSLQSLLSLSEDRDEEAQVQIQALGSRLNTALAQLAAEERTR 629

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSI 243
            + +    +     +  L    ++   +       R G+ I        +  +F+  S+ 
Sbjct: 630 AELEAAEVERLAAEAQELERYRSEFFGRLRELLEGRDGVRIEGDRFVFSSEVLFEVGSAD 689

Query: 244 PLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAY 293
              E +  ++ +  +L             +I + GHTD           +NW LS  RA 
Sbjct: 690 LATEGLAQIENVAALLLEIAVDIPEAIDWIIRVDGHTDDQQLREGATYANNWELSQARAL 749

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +    +  + G+   R+   +GF  HR    +D     +ANRRI++ + +R
Sbjct: 750 AVVLYMSEELGIPPRRL-AATGFGEHRPIAPNDTDEGQAANRRIELKLTER 799


>gi|189468503|ref|ZP_03017288.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
           17393]
 gi|189436767|gb|EDV05752.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
           17393]
          Length = 299

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +  K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S 
Sbjct: 119 KQLVDTKSKSDSLNVVLTNNLTRSLSREELKEVDVKVLKGVVYISLADNM---LYKSGSY 175

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM 300
                    L KI +++    +  + + G+TD  P      R+NW LS  RA S  Q L 
Sbjct: 176 EINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRPNIRNNWDLSALRASSVVQALQ 235

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              GV   R+S   G   +     +D       NRR  I++  +
Sbjct: 236 NQYGVDPKRLSAA-GRGEYNPLTDNDTELGKQRNRRTQIIITPK 278


>gi|149279859|ref|ZP_01885986.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
 gi|149229449|gb|EDM34841.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
          Length = 289

 Score = 99.3 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 9/253 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           S  K       +        ++    Q  Q     ++    S  +Q    K ++      
Sbjct: 22  SSKKYKDLEASYTQLQEKSRELNQKYQSGQQDLSGSSSRVKSLEEQIASEKANVAALQAA 81

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                 S+        +    +   +K     +  K +   L   +++ L+  ++   ++
Sbjct: 82  LDKCLNSSSQGNVNISKLVDEINTSNKYIQHLVNTKNKSDSLNVVLTNNLTRSLSREEMR 141

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +  +  + IS+ D     ++   S          L KI +++         I G+T
Sbjct: 142 DVDVQVLKGVVYISLSDNM---LYKSGSYEISDVAGQTLAKIAKIIKDYQGYDVLIEGNT 198

Query: 273 DASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS- 329
           D  P      R+NW LS  RA S  Q L     V   R++   G   +     +D     
Sbjct: 199 DNVPISQTNIRNNWDLSALRASSVVQALQNTYSVDPKRLTAG-GRGEYNPVAGNDSEAGK 257

Query: 330 -ANRRIDILVEDR 341
             NRR  I++  +
Sbjct: 258 MKNRRTQIIITPK 270


>gi|149917198|ref|ZP_01905698.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149822114|gb|EDM81507.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 395

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 18/259 (6%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                  D   DE    +  + K G  +   +++          +     +    +    
Sbjct: 131 PDEAEDFDAFEDEDGCPDRDNDKDGVLDAA-EFENGVWTNNDQKDGVDCRNDPEDIDEFE 189

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD-N 210
           ++        D +  ++ ++   + P   ++         L +    I         D  
Sbjct: 190 DEDGCPDPDNDQDGILDVDDKCPIDPEDIDQFEDEDGCPELDNDKDGILDVDDQCPLDPE 249

Query: 211 IVKGVLFETTRTGILISII----DQRNTPMFDKS-----SSIPLPETIVVLQKIGEVLAH 261
            + G   E     + + +           MFD       S         +L  +  VL  
Sbjct: 250 DIDGEEDEDGCPDLAVKVDPCAIKLDGKIMFDSGKYDLKSRKFADSNSKLLDDVYTVLNT 309

Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           + ++   I GHTD+   +  +R N RLS +R  S  + L+  G+   RI    G+     
Sbjct: 310 NPDITIEIGGHTDS---KGSSRSNQRLSENRVKSVREYLVDKGIDGSRI-TFKGYGEDVP 365

Query: 321 KIASDPMNSA--NRRIDIL 337
              +        NRR++IL
Sbjct: 366 VDTNRTKEGRENNRRVEIL 384


>gi|322435021|ref|YP_004217233.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321162748|gb|ADW68453.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 255

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 15/194 (7%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +  K    +TD   S+N        P+      A   + RL+++ K             
Sbjct: 62  DQHSKTPPITTDGNSSLNLATAPIALPVPSAAESAEATEIRLKEVVK-----AQVEKKQL 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               V    T  G+++S+   R    F   S+   PE + VLQ +   L   +  + + G
Sbjct: 117 TSDAVSVRATGDGLVVSL---REAGFFASGSADVRPEALAVLQTVAAALPRQS--MRVEG 171

Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP-- 326
           HTD  P        NW LS  RA +  ++L+    V   ++S   G A  R    +    
Sbjct: 172 HTDNIPIHTTQFATNWELSTARAATITRLLIAQNAVDPAQVSAA-GDAEFRPIADNATDA 230

Query: 327 MNSANRRIDILVED 340
             + NRR+DI++  
Sbjct: 231 GRAQNRRVDIILLK 244



 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 5/173 (2%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                   N   W + YADF+T+L AFF+V++     D   +  +         +     
Sbjct: 3   KKKHPEHVNHERWLVSYADFITLLFAFFVVLFASGQNDKRKQVMLAHAVQSAFMH----- 57

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            GIFD+ +     + +                     + +  + +  E     +   Q +
Sbjct: 58  NGIFDQHSKTPPITTDGNSSLNLATAPIALPVPSAAESAEATEIRLKEVVKAQVEKKQLT 117

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
               +           L ++              L  L        ++  R++
Sbjct: 118 SDAVSVRATGDGLVVSLREAGFFASGSADVRPEALAVLQTVAAALPRQSMRVE 170


>gi|229141242|ref|ZP_04269781.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
 gi|229198660|ref|ZP_04325361.1| OmpA/MotB domain protein [Bacillus cereus m1293]
 gi|228584819|gb|EEK42936.1| OmpA/MotB domain protein [Bacillus cereus m1293]
 gi|228642283|gb|EEK98575.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
          Length = 233

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+               +       K+   A  +++ + +L  
Sbjct: 24  KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 83

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +  + +      + T  G+ ++I++     +FD   +    E++ + +++  
Sbjct: 84  VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 140

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +   + S + G
Sbjct: 141 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 199

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 200 YGEYRSIAPNDTQEGKAKNRRVEVFIL 226


>gi|319955316|ref|YP_004166583.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319423976|gb|ADV51085.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 238

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 8/141 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G        GI +   +      FD + S+    +  +L ++  +L    
Sbjct: 91  QAERIEEEIPGAEVTRVGEGINVVFNEDAG-VYFDTNKSVVKGTSATILDRLVGILKEYP 149

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  I + GHTD+      A  N  LS  RA S    L   G+S +R++    +   + K 
Sbjct: 150 DSNILVEGHTDS---AGPADYNMNLSKQRAESVTSYLNTHGISSNRLTT-KWYGETQPKS 205

Query: 323 ASDPMN--SANRRIDILVEDR 341
            +      + NRR+++++   
Sbjct: 206 DNSTTEGKAKNRRVEMVIVAS 226


>gi|285017932|ref|YP_003375643.1| hypothetical protein XALc_1141 [Xanthomonas albilineans GPE PC73]
 gi|283473150|emb|CBA15656.1| hypothetical protein XALc_1141 [Xanthomonas albilineans]
          Length = 231

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             +          L       G+        I +++ D      FD + S   P+    L
Sbjct: 85  AAIGNYQDRQERALRERTANTGIDVRRDGDNITLNLPDGIT---FDFNQSTLKPQFYSAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             + + L+   + +I + GHTD          N RLS  RA S    L   GV  +RI  
Sbjct: 142 NGVAKTLSEYNQTMIEVVGHTDNI---GSDAVNQRLSEQRASSVAAYLTAQGVQPERIQT 198

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           + G         +      + NRR++I V
Sbjct: 199 L-GAGKKYPIADNSTEAGRAQNRRVEIRV 226


>gi|260062849|ref|YP_003195929.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88784417|gb|EAR15587.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 231

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI ++    +    F  + S     ++  L K+  +     
Sbjct: 82  QAEKIEEELPGAEVKRVGEGINVTFTQDQGVH-FATNQSAIEGASVTTLNKLAGIFKEYP 140

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             VI + GHTD+         N  LS  RA S    L+  G+ +DR   +  +   + + 
Sbjct: 141 KSVILVEGHTDS---AGPEDYNMSLSQRRAESVVNYLVAQGIDKDRF-TVRWYGETQPRA 196

Query: 323 ASDPMN--SANRRIDILVEDRQ 342
            +      + NRR+++ +   +
Sbjct: 197 DNSTAEGKAQNRRVEMGIIASE 218


>gi|83949920|ref|ZP_00958653.1| flagellar motor protein [Roseovarius nubinhibens ISM]
 gi|83837819|gb|EAP77115.1| flagellar motor protein [Roseovarius nubinhibens ISM]
          Length = 627

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 86/240 (35%), Gaps = 16/240 (6%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
                 +  R E  +                    +       S+   +++ K+ N  L 
Sbjct: 389 EQEAMTEAARREQALLNQQVQALRTQLGELQALLDDAVDRESSSSVQLQTLGKDLNVALA 448

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNT 234
            L+ E+    + ++    L +     L    ++   +       + G+ I        + 
Sbjct: 449 RLAAEEKRRRELQEEKAKLLEAQKQDLEKYRSEFFGRLRDVLGAQDGVRIEGDRFVFSSE 508

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIAR--DN 284
            +F    +    E    + K+ E+L             VI + GHTD  P  N A   DN
Sbjct: 509 VLFAPGRAALSTEGRGEVAKVAEILRKVAGDIPPELDWVIRVDGHTDDVPIVNSAEFADN 568

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           W LS  RA S  + +++S G+  DR+S  +GF  ++     D   +   NRRI++   ++
Sbjct: 569 WELSQARALSVVRYMIESLGIPPDRLSA-NGFGQYQPVAQGDSAEARAQNRRIELKFTEK 627


>gi|297569175|ref|YP_003690519.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925090|gb|ADH85900.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 251

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 11/154 (7%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++ + I      L    +V     E     + I      ++  F    +    +   +L 
Sbjct: 87  EVREPIQQLFRELEDAGLVTVEEDEAGEVTVRIR-----DSVAFAFGRADLKEDFKALLD 141

Query: 254 KIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           ++GE+L  S   + + GHTD  P         NW LS  R+ +  + L++   +  DR+ 
Sbjct: 142 QLGEILVTSQATMVVEGHTDNVPMRPGAPFSSNWALSAARSVAVVEYLLEHYEIPRDRL- 200

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
               +A  R    +D       NRR++  +   +
Sbjct: 201 AAEAYADSRPVAPNDTAEGRAANRRVEFRIRPGE 234


>gi|258647767|ref|ZP_05735236.1| OmpA family protein [Prevotella tannerae ATCC 51259]
 gi|260852625|gb|EEX72494.1| OmpA family protein [Prevotella tannerae ATCC 51259]
          Length = 288

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 9/164 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              ++ K +   L   +++ L+  ++++ ++ V  +  +  + IS+ D     ++   S 
Sbjct: 111 KQLVEAKSKSDSLNMVLTNNLTRSLSNDELREVDVKVLKGVVYISLADNM---LYKSGSY 167

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300
                    L KI +++    +    + G+TD  P  R   R+NW LS  RA S    L 
Sbjct: 168 EINSRAKETLSKIAKIIKDYRDYDVLVEGNTDPVPITRTNIRNNWDLSCLRASSVVLALQ 227

Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              GV+  R++   G   +     ++       NRR  I++  +
Sbjct: 228 NDYGVNPARLTAA-GRGEYNPVTTNETEVGKQRNRRTQIIITPK 270


>gi|288800219|ref|ZP_06405677.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332432|gb|EFC70912.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 283

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   +S+ L+  ++   +K V  +  +  + IS+ D     ++   S     
Sbjct: 111 EVKSKSDSLNMVLSNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEIND 167

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303
                L KI +++    +    I G+TD  P      R+NW LS  RA S  Q L    G
Sbjct: 168 RAAETLSKIAKIITDYKDYDVLIEGNTDNVPIARENIRNNWDLSCLRASSVVQYLQTHYG 227

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           V+  R++   G   +     ++       NRR  I++  +
Sbjct: 228 VNPKRLTAG-GRGEYNPIANNNTELGKQRNRRTQIIITPK 266


>gi|260494689|ref|ZP_05814819.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
 gi|260197851|gb|EEW95368.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
          Length = 166

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 7/144 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++++     +      L E     + I + D+     FD   S+  P+   +L  + + +
Sbjct: 3   ANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSVVKPQYNEMLTNLKDFI 60

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             +   ++I GHTD   +      N  LS  RA +    L++ G+   RI  I       
Sbjct: 61  EKNDYEVTIVGHTD---YIASNAYNMGLSKRRAEAVKTKLIELGLDPSRIVGIVPRGEEE 117

Query: 320 LKIASDP--MNSANRRIDILVEDR 341
               +      + NRR++  +  R
Sbjct: 118 PIADNATTEGRAKNRRVEFKLVKR 141


>gi|330504865|ref|YP_004381734.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328919151|gb|AEB59982.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 218

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
                F  +S+         L  +  V    +   ++I GHTD++        N  LS  
Sbjct: 110 PGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDST---GSQELNQSLSQR 166

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA S    L  +GV   RIS   G    +   ++      + NRR++I +  
Sbjct: 167 RAQSVANYLTANGVPGQRISAY-GAGPSQPIASNATDAGRAQNRRVEINLRQ 217


>gi|257126323|ref|YP_003164437.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257050262|gb|ACV39446.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 215

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD +S +  P+    L  +  VL    +  I + GHTD          N  LS++
Sbjct: 105 PENITFDLNSYVVKPQFRGTLDSVATVLKTYPDSTIIVSGHTDT---SGNDAINNPLSVN 161

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L   G++  R+    G+       ++      + NRR++I +   Q
Sbjct: 162 RAASVASYLQSQGIASSRM-TYRGYGSKMPIASNATEAGRAQNRRVEIAIIANQ 214


>gi|149194324|ref|ZP_01871421.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
           TB-2]
 gi|149135499|gb|EDM23978.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
           TB-2]
          Length = 209

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +           ++K+ E+L  +    I + GHTD       A+ N +LS  RA + 
Sbjct: 101 FDFNKWNVKKIYYPQIKKVAEILKANPNLKIEVAGHTDNI---GSAKYNLKLSQKRAEAV 157

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            ++L+    ++ +RI    G+      + +      + NRR++I+
Sbjct: 158 KKILVNVYHINPNRIVA-RGYGEKYPLVPNTTSTNRALNRRVEII 201


>gi|311747916|ref|ZP_07721701.1| OmpA family protein [Algoriphagus sp. PR1]
 gi|126575910|gb|EAZ80220.1| OmpA family protein [Algoriphagus sp. PR1]
          Length = 225

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               +       ++G   E    GI I+     +  MFD   +     +   L ++ E L
Sbjct: 73  EMDKAAEELQRDLEGATVERVGEGIKITF---DSGLMFDVDKATLNSNSRDNLMELSETL 129

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E    + GHTDA+        N  LS  RAYS    L   G+ + R+ +I+ +  +
Sbjct: 130 KKYDETNILVEGHTDAT---GSDDYNLDLSRKRAYSVEDYLTNLGIQKSRL-EITAYGEN 185

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
           +    ++       NRR+++ +   +
Sbjct: 186 QPIATNETEAGRQQNRRVEVAIYANK 211


>gi|15804098|ref|NP_290137.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
           EDL933]
 gi|15833691|ref|NP_312464.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
 gi|26250192|ref|NP_756232.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
 gi|49176370|ref|YP_026228.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89110462|ref|AP_004242.1| predicted outer membrane lipoprotien [Escherichia coli str. K-12
           substr. W3110]
 gi|110643800|ref|YP_671530.1| putative outer membrane lipoprotein [Escherichia coli 536]
 gi|157158823|ref|YP_001465027.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
 gi|157163027|ref|YP_001460345.1| putative outer membrane lipoprotein [Escherichia coli HS]
 gi|168746904|ref|ZP_02771926.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|168753370|ref|ZP_02778377.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|168759642|ref|ZP_02784649.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|168765965|ref|ZP_02790972.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|168772488|ref|ZP_02797495.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|168779701|ref|ZP_02804708.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|168785422|ref|ZP_02810429.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
 gi|168797388|ref|ZP_02822395.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
 gi|170018219|ref|YP_001723173.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
 gi|170083060|ref|YP_001732380.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170680831|ref|YP_001745838.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
 gi|170766985|ref|ZP_02901438.1| OmpA family protein [Escherichia albertii TW07627]
 gi|188495948|ref|ZP_03003218.1| OmpA family protein [Escherichia coli 53638]
 gi|191165316|ref|ZP_03027159.1| OmpA family protein [Escherichia coli B7A]
 gi|191170332|ref|ZP_03031885.1| OmpA family protein [Escherichia coli F11]
 gi|193061844|ref|ZP_03042941.1| OmpA family protein [Escherichia coli E22]
 gi|193068535|ref|ZP_03049497.1| OmpA family protein [Escherichia coli E110019]
 gi|194427518|ref|ZP_03060067.1| OmpA family protein [Escherichia coli B171]
 gi|194435666|ref|ZP_03067769.1| OmpA family protein [Escherichia coli 101-1]
 gi|195935083|ref|ZP_03080465.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808020|ref|ZP_03250357.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208812888|ref|ZP_03254217.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208819372|ref|ZP_03259692.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209400986|ref|YP_002273038.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|209921016|ref|YP_002295100.1| putative outer membrane lipoprotein [Escherichia coli SE11]
 gi|215488837|ref|YP_002331268.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217326256|ref|ZP_03442340.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|218556112|ref|YP_002389025.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
 gi|218691843|ref|YP_002400055.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
 gi|218697269|ref|YP_002404936.1| putative outer membrane lipoprotein [Escherichia coli 55989]
 gi|218702317|ref|YP_002409946.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
 gi|218707187|ref|YP_002414706.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
 gi|227883718|ref|ZP_04001523.1| outer membrane lipoprotein [Escherichia coli 83972]
 gi|238902640|ref|YP_002928436.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
 gi|254795509|ref|YP_003080346.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           TW14359]
 gi|256020901|ref|ZP_05434766.1| putative outer membrane lipoprotein [Shigella sp. D9]
 gi|256025721|ref|ZP_05439586.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
 gi|260846733|ref|YP_003224511.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
 gi|260858052|ref|YP_003231943.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
           11368]
 gi|260870283|ref|YP_003236685.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
           11128]
 gi|261224871|ref|ZP_05939152.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254230|ref|ZP_05946763.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284929|ref|YP_003501747.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
           str. CB9615]
 gi|293407175|ref|ZP_06651099.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
 gi|293417001|ref|ZP_06659638.1| outer membrane lipoprotein [Escherichia coli B185]
 gi|293453862|ref|ZP_06664281.1| outer membrane lipoprotein [Escherichia coli B088]
 gi|298382924|ref|ZP_06992519.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
 gi|300815222|ref|ZP_07095447.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|300822046|ref|ZP_07102189.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|300898736|ref|ZP_07117047.1| OmpA family protein [Escherichia coli MS 198-1]
 gi|300920432|ref|ZP_07136866.1| OmpA family protein [Escherichia coli MS 115-1]
 gi|300925626|ref|ZP_07141493.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|300937157|ref|ZP_07152011.1| OmpA family protein [Escherichia coli MS 21-1]
 gi|300971377|ref|ZP_07171446.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|300976951|ref|ZP_07173686.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|301026191|ref|ZP_07189658.1| OmpA family protein [Escherichia coli MS 69-1]
 gi|301028182|ref|ZP_07191452.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|301304604|ref|ZP_07210713.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|301646016|ref|ZP_07245922.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|307140242|ref|ZP_07499598.1| putative outer membrane lipoprotein [Escherichia coli H736]
 gi|307314313|ref|ZP_07593920.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|309796193|ref|ZP_07690604.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|312968105|ref|ZP_07782316.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
 gi|312972173|ref|ZP_07786347.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
 gi|331644263|ref|ZP_08345392.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
 gi|331655189|ref|ZP_08356188.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
 gi|331659868|ref|ZP_08360806.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
 gi|331665175|ref|ZP_08366076.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
 gi|331670386|ref|ZP_08371225.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
 gi|331675043|ref|ZP_08375800.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
 gi|331679633|ref|ZP_08380303.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
 gi|331685215|ref|ZP_08385801.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
 gi|332282119|ref|ZP_08394532.1| OmpA family protein [Shigella sp. D9]
 gi|54042327|sp|P37665|YIAD_ECOLI RecName: Full=Inner membrane lipoprotein yiaD; Flags: Precursor
 gi|12518287|gb|AAG58701.1|AE005582_4 putative outer membrane protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110621|gb|AAN82806.1|AE016768_224 Hypothetical lipoprotein yiaD precursor [Escherichia coli CFT073]
 gi|13363911|dbj|BAB37860.1| putative outer membrane protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|48994946|gb|AAT48190.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85676493|dbj|BAE77743.1| predicted outer membrane lipoprotien [Escherichia coli str. K12
           substr. W3110]
 gi|110345392|gb|ABG71629.1| putative outer membrane lipoprotein [Escherichia coli 536]
 gi|157068707|gb|ABV07962.1| OmpA family protein [Escherichia coli HS]
 gi|157080853|gb|ABV20561.1| OmpA family protein [Escherichia coli E24377A]
 gi|169753147|gb|ACA75846.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
 gi|169890895|gb|ACB04602.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170124423|gb|EDS93354.1| OmpA family protein [Escherichia albertii TW07627]
 gi|170518549|gb|ACB16727.1| OmpA family protein [Escherichia coli SMS-3-5]
 gi|187771758|gb|EDU35602.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|188018309|gb|EDU56431.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|188491147|gb|EDU66250.1| OmpA family protein [Escherichia coli 53638]
 gi|189002241|gb|EDU71227.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|189358800|gb|EDU77219.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189364720|gb|EDU83139.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|189369665|gb|EDU88081.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|189374556|gb|EDU92972.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
 gi|189380056|gb|EDU98472.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
 gi|190904718|gb|EDV64424.1| OmpA family protein [Escherichia coli B7A]
 gi|190909140|gb|EDV68726.1| OmpA family protein [Escherichia coli F11]
 gi|192932634|gb|EDV85231.1| OmpA family protein [Escherichia coli E22]
 gi|192958186|gb|EDV88627.1| OmpA family protein [Escherichia coli E110019]
 gi|194414558|gb|EDX30831.1| OmpA family protein [Escherichia coli B171]
 gi|194425209|gb|EDX41193.1| OmpA family protein [Escherichia coli 101-1]
 gi|208727821|gb|EDZ77422.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734165|gb|EDZ82852.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208739495|gb|EDZ87177.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209162386|gb|ACI39819.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|209755238|gb|ACI75931.1| putative outer membrane protein [Escherichia coli]
 gi|209755240|gb|ACI75932.1| putative outer membrane protein [Escherichia coli]
 gi|209755242|gb|ACI75933.1| putative outer membrane protein [Escherichia coli]
 gi|209755244|gb|ACI75934.1| putative outer membrane protein [Escherichia coli]
 gi|209755246|gb|ACI75935.1| putative outer membrane protein [Escherichia coli]
 gi|209914275|dbj|BAG79349.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215266909|emb|CAS11352.1| predicted outer membrane lipoprotien [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217322477|gb|EEC30901.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|218354001|emb|CAV00488.1| putative outer membrane lipoprotien [Escherichia coli 55989]
 gi|218362880|emb|CAR00514.1| putative outer membrane lipoprotien [Escherichia coli IAI1]
 gi|218372303|emb|CAR20168.1| putative outer membrane lipoprotien [Escherichia coli IAI39]
 gi|218429407|emb|CAR10226.1| putative outer membrane lipoprotien [Escherichia coli ED1a]
 gi|218434284|emb|CAR15206.1| putative outer membrane lipoprotien [Escherichia coli UMN026]
 gi|227839298|gb|EEJ49764.1| outer membrane lipoprotein [Escherichia coli 83972]
 gi|238862715|gb|ACR64713.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
 gi|254594909|gb|ACT74270.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359]
 gi|257756701|dbj|BAI28203.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
           11368]
 gi|257761880|dbj|BAI33377.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
 gi|257766639|dbj|BAI38134.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
           11128]
 gi|260447432|gb|ACX37854.1| OmpA/MotB domain protein [Escherichia coli DH1]
 gi|284923586|emb|CBG36682.1| putative outer membrane protein [Escherichia coli 042]
 gi|290764802|gb|ADD58763.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
           str. CB9615]
 gi|291321988|gb|EFE61419.1| outer membrane lipoprotein [Escherichia coli B088]
 gi|291425986|gb|EFE99020.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
 gi|291431577|gb|EFF04562.1| outer membrane lipoprotein [Escherichia coli B185]
 gi|298276760|gb|EFI18278.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
 gi|299878738|gb|EFI86949.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|300308421|gb|EFJ62941.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|300357615|gb|EFJ73485.1| OmpA family protein [Escherichia coli MS 198-1]
 gi|300395632|gb|EFJ79170.1| OmpA family protein [Escherichia coli MS 69-1]
 gi|300411301|gb|EFJ94839.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|300412565|gb|EFJ95875.1| OmpA family protein [Escherichia coli MS 115-1]
 gi|300418280|gb|EFK01591.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|300457770|gb|EFK21263.1| OmpA family protein [Escherichia coli MS 21-1]
 gi|300525409|gb|EFK46478.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|300532114|gb|EFK53176.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|300840082|gb|EFK67842.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|301075768|gb|EFK90574.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|306906028|gb|EFN36548.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|307555658|gb|ADN48433.1| putative outer membrane protein [Escherichia coli ABU 83972]
 gi|308120254|gb|EFO57516.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|310334550|gb|EFQ00755.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
 gi|312287364|gb|EFR15273.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
 gi|315062837|gb|ADT77164.1| predicted outer membrane lipoprotein [Escherichia coli W]
 gi|315138128|dbj|BAJ45287.1| inner membrane lipoprotein yiaD precursor [Escherichia coli DH1]
 gi|315254081|gb|EFU34049.1| OmpA family protein [Escherichia coli MS 85-1]
 gi|315294130|gb|EFU53482.1| OmpA family protein [Escherichia coli MS 153-1]
 gi|315300095|gb|EFU59333.1| OmpA family protein [Escherichia coli MS 16-3]
 gi|315618412|gb|EFU98999.1| inner membrane lipoprotein yiaD [Escherichia coli 3431]
 gi|320191391|gb|EFW66041.1| putative outer membrane protein [Escherichia coli O157:H7 str.
           EC1212]
 gi|320201426|gb|EFW76007.1| putative outer membrane protein [Escherichia coli EC4100B]
 gi|320639873|gb|EFX09467.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           G5101]
 gi|320645036|gb|EFX14060.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
           493-89]
 gi|320650303|gb|EFX18786.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
           H 2687]
 gi|320655878|gb|EFX23801.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661658|gb|EFX29073.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320666682|gb|EFX33665.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153881|gb|EFZ40115.1| inner membrane lipoprotein yiaD [Escherichia coli EPECa14]
 gi|323160679|gb|EFZ46618.1| inner membrane lipoprotein yiaD [Escherichia coli E128010]
 gi|323174210|gb|EFZ59838.1| inner membrane lipoprotein yiaD [Escherichia coli LT-68]
 gi|323179484|gb|EFZ65051.1| inner membrane lipoprotein yiaD [Escherichia coli 1180]
 gi|323182708|gb|EFZ68110.1| inner membrane lipoprotein yiaD [Escherichia coli 1357]
 gi|323376572|gb|ADX48840.1| OmpA/MotB domain protein [Escherichia coli KO11]
 gi|323934746|gb|EGB31133.1| OmpA family protein [Escherichia coli E1520]
 gi|323939549|gb|EGB35757.1| OmpA family protein [Escherichia coli E482]
 gi|323944551|gb|EGB40622.1| OmpA family protein [Escherichia coli H120]
 gi|323959435|gb|EGB55094.1| OmpA family protein [Escherichia coli H489]
 gi|323966022|gb|EGB61463.1| OmpA family protein [Escherichia coli M863]
 gi|323971357|gb|EGB66598.1| OmpA family protein [Escherichia coli TA007]
 gi|323975035|gb|EGB70144.1| OmpA family protein [Escherichia coli TW10509]
 gi|324007339|gb|EGB76558.1| OmpA family protein [Escherichia coli MS 57-2]
 gi|324014213|gb|EGB83432.1| OmpA family protein [Escherichia coli MS 60-1]
 gi|324021134|gb|EGB90353.1| OmpA family protein [Escherichia coli MS 117-3]
 gi|324116568|gb|EGC10485.1| OmpA family protein [Escherichia coli E1167]
 gi|326337443|gb|EGD61278.1| putative outer membrane protein [Escherichia coli O157:H7 str.
           1044]
 gi|326339968|gb|EGD63775.1| putative outer membrane protein [Escherichia coli O157:H7 str.
           1125]
 gi|327251203|gb|EGE62896.1| inner membrane lipoprotein yiaD [Escherichia coli STEC_7v]
 gi|331036557|gb|EGI08783.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
 gi|331047204|gb|EGI19282.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
 gi|331053083|gb|EGI25116.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
 gi|331057685|gb|EGI29671.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
 gi|331062448|gb|EGI34368.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
 gi|331067952|gb|EGI39350.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
 gi|331072805|gb|EGI44130.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
 gi|331077586|gb|EGI48798.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
 gi|332104471|gb|EGJ07817.1| OmpA family protein [Shigella sp. D9]
 gi|332345519|gb|AEE58853.1| inner membrane lipoprotein YiaD [Escherichia coli UMNK88]
          Length = 219

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|262384794|ref|ZP_06077926.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262293510|gb|EEY81446.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 277

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 50  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 110 ELQDMMNAQNEKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264


>gi|260599847|ref|YP_003212418.1| putative outer membrane lipoprotein [Cronobacter turicensis z3032]
 gi|260219024|emb|CBA34379.1| Inner membrane lipoprotein yiaD [Cronobacter turicensis z3032]
          Length = 220

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD S +   P     L  +  
Sbjct: 80  YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSQANLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N +LS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GGQALNMKLSQQRAESVASALITQGVAANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPVASNSTEEGKAQNRRVEITL 216


>gi|92113921|ref|YP_573849.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91797011|gb|ABE59150.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 294

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+    E   +L  +   L+ +    + + G+TD+      A  N  LS  RA S 
Sbjct: 192 FEFDSATLTSEAENILDDVAAKLSSNESVDVRLEGYTDSV---GSASYNKDLSQRRADSV 248

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            + L+  GV+ D I+   G+        ++     + NRR+++
Sbjct: 249 KEYLVSKGVNADSITTY-GYGEQNPIATNETAEGRAENRRVEL 290


>gi|83945760|ref|ZP_00958104.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
 gi|83850850|gb|EAP88711.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
          Length = 217

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +         GV        + + +        F  +S+        VL  + 
Sbjct: 75  NYMDRQENAFRERLRGSGVTVRRVGNDLYLVM---PGDVTFATNSAQIDQRFGPVLNDVA 131

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +VL       + + GH D+      A  N  LS  RA S    L+  GV  DR+  ++G 
Sbjct: 132 DVLMTYPATYVDVIGHADSV---GDASYNQTLSERRASSVAAELIARGVMRDRLY-VAGM 187

Query: 316 AHHRLKIASDP--MNSANRRIDILV 338
              +   ++D     +ANRR++I +
Sbjct: 188 GESQPIASNDTDSGRAANRRVEIKI 212


>gi|253698707|ref|YP_003019896.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251773557|gb|ACT16138.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 333

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S   P+    L+ + + L        +I GHTD+         N +LS  RA S 
Sbjct: 229 FDTNKSDIKPQYHDELKALADFLKEFPNASGTIEGHTDSV---GDKAANMKLSQRRADSV 285

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
            + L+   GV+ +R+  + GF   +    +        NRRI+
Sbjct: 286 RKYLVDRFGVAPERVKAV-GFGPTKPAADNKTAAGKQKNRRIE 327


>gi|108757075|ref|YP_633305.1| OmpA family protein [Myxococcus xanthus DK 1622]
 gi|17863963|gb|AAL46989.1|AF448145_1 unknown [Myxococcus xanthus]
 gi|108460955|gb|ABF86140.1| OmpA family protein [Myxococcus xanthus DK 1622]
          Length = 249

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  + S    +    L  + + +  +   +++ GH D          N +LS  RA S  
Sbjct: 150 FGFNESGLSADAQQRLSDLAQCMKTAPGRVTLAGHADER---GTEEYNLQLSNRRAASVK 206

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           + L   GV   ++  + G+   R   ++   ++   NRR++ 
Sbjct: 207 RYLTDLGVPASQLGTV-GYGETRPVNSASSEDAWSENRRVEF 247


>gi|187919624|ref|YP_001888655.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187718062|gb|ACD19285.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 320

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 16/275 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQKKQYQRL 127
           P   +    + G           +      +I       +     + +G     +  +  
Sbjct: 49  PPAASASVGNAGPAVNTAGLASGTTGAGTGAITAAPPPANATPGQVVVGGKVPDEATKAA 108

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKIL 184
                  +    +   +  +   +          K    +     +    +     +   
Sbjct: 109 VLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKG 168

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            +  + + Q LA  +++ L+      I  G+    +  G+L   +  R    F+  S+  
Sbjct: 169 EVHNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATL 225

Query: 245 LPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+   +L Q    ++  +T+ ++I GHTD          N  LS  RA +    L+  G
Sbjct: 226 TPQGRAILDQMAAAMVKMTTKTVAIIGHTDN---SGNRTSNIALSQARADAVKGYLVAKG 282

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +   ++S  +G    +   ++D     + NRRI+ 
Sbjct: 283 IPPQQLST-TGVGPDQPIASNDTTDGRARNRRIEF 316


>gi|259417312|ref|ZP_05741231.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
 gi|259346218|gb|EEW58032.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
          Length = 519

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 8/149 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++    + L ++     +  + T   +LI + +      F   S     +   ++    +
Sbjct: 375 QLERLSAALESELETGQIELDRTNDWVLIRVSEALR---FRSGSEDLTSDIDSLIASAAK 431

Query: 258 VLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            L      I + GHTD+ P   R   + N +LS  RA +   +L     + DRI  + G 
Sbjct: 432 ALNAEQGPIRVVGHTDSVPMSGRGRFKSNEQLSKARAQTVADLLAAQLEAPDRI-TVEGK 490

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   +      + NRR++IL+    
Sbjct: 491 GPVDPIADNGTREGRARNRRVEILIPREN 519


>gi|261417296|ref|YP_003250979.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373752|gb|ACX76497.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325429|gb|ADL24630.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 659

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+     +   L  I E ++      + ++GHTD    +   + N +LS DRA + 
Sbjct: 556 FKTASARLTKSSYGTLDDIAELMIKIPEANLEVQGHTDN---KGSEKRNKKLSEDRAAAV 612

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            + L+K GV++DR+ + +G+   +    +      + NRR++++
Sbjct: 613 VKYLVKKGVAKDRL-RAAGYGSEKPIADNTDAAGRAQNRRVELV 655


>gi|229588770|ref|YP_002870889.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
 gi|229360636|emb|CAY47494.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
               +  + +        +       L+  +  +  +     D        +    + + 
Sbjct: 21  STPPNANLENARTNFSALQTNPQATKLAALETKDASEWLDKADKAYRDKEDEKKVDQLAY 80

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +   +   +     +  + K   D   +            +   +  + T  G L++
Sbjct: 81  LTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 140

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
             D     +F  + S      +V + K+ + L  + +    + G+TD++        N  
Sbjct: 141 FGD----VLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 193

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           LS  RA S  + L + GV   RI    G+        +      + NRR+++ + +  
Sbjct: 194 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250


>gi|261414988|ref|YP_003248671.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371444|gb|ACX74189.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326246|gb|ADL25447.1| ompA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 756

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 15/245 (6%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D            +   G            +                 +  DS     
Sbjct: 413 DTDEDTVPDYKDMCPETPKGVKVDSVGCPLDTDEDTVPDYKDMCPETPKGVKVDSVGCPL 472

Query: 157 LCKSTDLEKSINKEENYFL-PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
                 +    +K  +      +  +       K  + D   K  +TL G+  +     +
Sbjct: 473 DSDKDGVFDGPDKCPDTPEGVAVDADGCPLDTDKDGVPDYRDKCPNTLPGIQVNKRGCPL 532

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
             +     +   I        F+  S+  L  +   L  I  +L    EV   ++GHTD 
Sbjct: 533 RRKEDLDYLKKGIQ-------FEFDSAKLLKSSYPTLDDIIALLEKIPEVKLEVQGHTD- 584

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANR 332
                    N +LS DRA+S        G++ DR+  I GF        +  D   + NR
Sbjct: 585 --IVGTEDYNQKLSEDRAHSVTDYFQSKGIAADRLRAI-GFGTRMPLADNVTDEGRAKNR 641

Query: 333 RIDIL 337
           R++++
Sbjct: 642 RVELI 646


>gi|150006781|ref|YP_001301524.1| putative flagellar motor protein MotB [Parabacteroides distasonis
           ATCC 8503]
 gi|149935205|gb|ABR41902.1| putative flagellar motor protein MotB [Parabacteroides distasonis
           ATCC 8503]
          Length = 277

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 50  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 110 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264


>gi|16799769|ref|NP_470037.1| hypothetical protein lin0694 [Listeria innocua Clip11262]
 gi|16413146|emb|CAC95926.1| motB [Listeria innocua Clip11262]
 gi|313620085|gb|EFR91593.1| chemotaxis protein MotB [Listeria innocua FSL S4-378]
          Length = 275

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 14/225 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q       I     +    +       D      + K+ + +    +         +  
Sbjct: 47  EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            +L  + +++++   K+I S ++    +++   +  + +  G+LI+I D     +F   S
Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---EHLGAKITTKYSDEGLLITIRDD---ILFQSGS 160

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298
           +    +   + ++IGE+ A     +   + GHTD  P        NW LS+ RA +  + 
Sbjct: 161 AELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220

Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIATNREKNRRVEIMVR 264



 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 71/209 (33%), Gaps = 1/209 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +    +         K   +   +    +         LS +K    K    L    K
Sbjct: 123 QIDSYIAAEHLGAKITTKYSDEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGK 182

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226
                +     DN+       ++   + +
Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211


>gi|268680520|ref|YP_003304951.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268618551|gb|ACZ12916.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 335

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P  +  +QK+ + +  +     +  GHTD+   +     N +LS  RA + 
Sbjct: 233 FDFDKSVVKPAFMPEIQKVADFMKQNPGYSVVLEGHTDS---KGSDAYNQKLSDSRAKAV 289

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
            + L   GV+  +++    +   +    +D     + NRR+D
Sbjct: 290 AKALSNLGVAAAKVTT-EAYGESKPVATNDTEAGRAENRRVD 330


>gi|229158119|ref|ZP_04286188.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
 gi|228625348|gb|EEK82106.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
          Length = 234

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLSIAKEMSNLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +   + S + G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-GYGEYRAIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|146309839|ref|YP_001174913.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
 gi|145316715|gb|ABP58862.1| OmpA/MotB domain protein [Enterobacter sp. 638]
          Length = 220

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++        FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMQGTGVSVTRNGDNIILNMPSNVT---FDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL   ++  +++ G+TD++        N RLS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYSKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASSLITQGVAANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 +++     + NRR++I +
Sbjct: 193 PANPIASNNTAEGKAQNRRVEITL 216


>gi|90416505|ref|ZP_01224436.1| ompA family protein [marine gamma proteobacterium HTCC2207]
 gi|90331704|gb|EAS46932.1| ompA family protein [marine gamma proteobacterium HTCC2207]
          Length = 220

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 10/200 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +  + + K            ++    +       K     +        +   + + 
Sbjct: 24  DPYTGEQKTTKTAIGASIGAGVGAVVAYLDNKDEDSRKRNKRILAAAGGGAAIGYYMDAQ 83

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
            + L       GV  E     I + +        F  +S+        VL  +  VL   
Sbjct: 84  EAKLRQQLRGSGVSVERVGDNINLIM---PGNITFASNSADINASFYSVLDSVALVLEEY 140

Query: 263 TEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            +  + + GHTD+      A  N  LS  RA S    L+   +   R+  + GF   +  
Sbjct: 141 DKTLVVVAGHTDSD---GGAAFNEDLSERRAQSVSGYLVSQSILPIRLETV-GFGERQPI 196

Query: 322 IASDPMNSA--NRRIDILVE 339
             +D       NRR++I + 
Sbjct: 197 AGNDSAAGKQLNRRVEITLL 216


>gi|326799764|ref|YP_004317583.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326550528|gb|ADZ78913.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 169

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSL 289
            +  +F  +SS    +  V ++ +   +  +     I I GHTD++     A  N  LS 
Sbjct: 61  ESDVLFATNSSYLSEKAKVTMKNMVAYINKNYPNAQIQINGHTDST---GEADYNQWLSE 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            RA S     +  G++   I    G+   +    +        NRR+++++  
Sbjct: 118 KRAASVKNYAVSIGLNGSNIKT-KGYGKSKPVATNSTADGRQKNRRVEVIILK 169


>gi|313112366|ref|ZP_07798128.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
           39016]
 gi|310884630|gb|EFQ43224.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
           39016]
          Length = 372

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F  +S+    E   +L +I + L      
Sbjct: 235 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 291

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW+LS  RA     +L  +     R +   G +       +
Sbjct: 292 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVATN 350

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I V
Sbjct: 351 ASAEGRARNRRVEITV 366


>gi|205374484|ref|ZP_03227280.1| flagellar motor protein MotS [Bacillus coahuilensis m4-4]
          Length = 211

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 6/173 (3%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             ++   +  +      L              +  ++L + +      L  + +    + 
Sbjct: 34  PSASPEVEKEDDMVQKELEDNDAPPNTDAGEPQTKEELDQLLDEIQQYLDENKLNDVAVA 93

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
             T  G+++ + +Q    +F   +++ + +    L K+ E+L+    +I I GHTD  P 
Sbjct: 94  SRTERGVVLVLQEQ---VLFQSGNAVIISDAYPFLDKVAELLSSIPNMIKIEGHTDNRPI 150

Query: 278 RNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN 328
                  NW LS  R+    +  +    +   R   + G+   R    +D   
Sbjct: 151 STSVFPSNWELSAARSSGVIRYFISNHQLDPTRFIAV-GYGDTRPLAPNDSAE 202


>gi|330810957|ref|YP_004355419.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379065|gb|AEA70415.1| putative lipoprotein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 269

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 89/244 (36%), Gaps = 13/244 (5%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
              +  +   +   Q  + + N+   +        ++    D               +  
Sbjct: 24  QRSEAALEQASTDFQKVKEDANVLRAAPRDVIRAGESLARADRLSSYWGSGEDVQHYAYL 83

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            +    +      ++L  +R  +L+   +++   L      ++ +   +   +   + + 
Sbjct: 84  SQRYSAIAREHSNQVLNEERAAKLELERQRLQLALRESKLLSVQQQGKWLEEQIMAMATT 143

Query: 229 IDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA 281
              R   M      FD   +        V+ KI + L  +   V+ I G+TD++      
Sbjct: 144 QTDRGLVMTLGDVLFDTGEAELKNSANRVVLKIVQFLQLNPKRVVRIEGYTDST---GGK 200

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           ++N +LS DRA +   VL+  GV E RI ++ G+        +      + NRR++I+  
Sbjct: 201 QENLKLSRDRAQAVADVLVDLGVDEKRI-QVEGYGDQYPVDVNASERGRAQNRRVEIVFS 259

Query: 340 DRQG 343
           D +G
Sbjct: 260 DEKG 263


>gi|254038735|ref|ZP_04872791.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|226839241|gb|EEH71264.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|309703955|emb|CBJ03298.1| putative outer membrane protein [Escherichia coli ETEC H10407]
          Length = 219

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 355

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           +  +   F  +S+    E    +Q I EVL    +  ++I GHTD++     A  N  +S
Sbjct: 228 ESFSQGTFATNSTELSDEGKAAVQPIVEVLQTYPQSTVNIVGHTDST---GAAEYNMMIS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             RA +    + + G+   RI+  SG    +   ++D     + NRR++  +
Sbjct: 285 KKRAAAVAAYIEEQGIESSRITA-SGEGEEKPIASNDTAEGRAQNRRVEATI 335


>gi|323697552|ref|ZP_08109464.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323457484|gb|EGB13349.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 248

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 9/196 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE    + K+   +                    A+ R++ ++   K  +   +      
Sbjct: 53  SETFSSVTKALQGKMDKISTSRITREEAGVLLDQALMRRQIIESQRKVFAEVKTLQTKKG 112

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIR 269
           +   V        I + +       MF        P+   ++  + +  + H  + I I 
Sbjct: 113 VEGLVSANFEDGVITLRV---PGDVMFQSGQVELTPKGAQLVADLKDFFIKHKDQNIKIV 169

Query: 270 GHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           G+TD          +DNW +S  RA +  + L+K G+   R++  +G A+      +   
Sbjct: 170 GYTDNVRPGGNSRFKDNWEISAMRAVNVLRELLKLGLESTRLTA-TGLAYLNPLYPNTSE 228

Query: 328 --NSANRRIDILVEDR 341
              + NRR++ ++E R
Sbjct: 229 EYRAKNRRVEFILEKR 244



 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          ++  +    W   +AD   +L+ FF++++ ++  D++             +  M
Sbjct: 14 EEDDSEGSEWLTTFADLSMLLLVFFILLYSMSTLDNEKFSETFSSVTKALQGKM 67


>gi|313624928|gb|EFR94836.1| chemotaxis protein MotB [Listeria innocua FSL J1-023]
          Length = 275

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 93/232 (40%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 37  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+++   +  + +  G+LI+I D    
Sbjct: 97  EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKITTKYSEEGLLITIRDD--- 153

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+    +   + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 154 ILFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIATNREKNRRVEIMVR 264



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K     +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +    +         K   +   +    +         LS +K    K    L    K
Sbjct: 123 QIDSYIAAEHLGAKITTKYSEEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGK 182

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226
                +     DN+       ++   + +
Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211


>gi|332996326|gb|EGK15953.1| inner membrane lipoprotein yiaD [Shigella flexneri VA-6]
          Length = 219

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|261854755|ref|YP_003262038.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261835224|gb|ACX94991.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 364

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   ++  PE+   L +  ++L       + I GHTD +        N +LS 
Sbjct: 257 RLDGIFFDSGKALLKPESNPALDQAVQLLRQQASLKLLIAGHTDDT---GSHAANQKLSQ 313

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            RA +    L+  G++ DR++   GF        +  D   + NRR++++
Sbjct: 314 QRAEAVRNALLARGIAADRLTA-QGFGSGVPLADNASDAGRAQNRRVELV 362


>gi|152984892|ref|YP_001347626.1| outer membrane protein [Pseudomonas aeruginosa PA7]
 gi|150960050|gb|ABR82075.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
          Length = 269

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 92/245 (37%), Gaps = 12/245 (4%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           ++ + K   +      +        ++ I    +  ++E   +     S+  +    S  
Sbjct: 27  EQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGESLARAERLSSYWGSSSDVIQYAYLSQR 86

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTR 221
             +   +     L      ++   + + +L    AK +S    G      +  +  E T 
Sbjct: 87  YSEIARQHAQLNLNQERLVRLQLERERLQLALREAKLLSVQEQGQRLSEEIASLSTEETE 146

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI 280
            G+++++ D     +FD + +   P       K+ + L  +   VI I G+TD+      
Sbjct: 147 RGLVLTLGD----VLFDFNRAELKPAANRTALKLVQFLQLNPRRVIRIEGYTDSV---GD 199

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            + N  LS  RA +   VL   GV   R+ +++G+        +      + NRR++I+ 
Sbjct: 200 RQANLDLSRARAQAVADVLADLGVDPARM-QVAGYGEAFPVTDNASNRGRAQNRRVEIVF 258

Query: 339 EDRQG 343
            + +G
Sbjct: 259 SNDKG 263


>gi|16762663|ref|NP_458280.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766931|ref|NP_462546.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29144150|ref|NP_807492.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62182147|ref|YP_218564.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161505818|ref|YP_001572930.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|161616710|ref|YP_001590675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549121|ref|ZP_02342880.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168232486|ref|ZP_02657544.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168235246|ref|ZP_02660304.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168241813|ref|ZP_02666745.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168465059|ref|ZP_02698951.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168818532|ref|ZP_02830532.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446335|ref|YP_002042894.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450414|ref|YP_002047675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470919|ref|ZP_03076903.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738075|ref|YP_002116578.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250152|ref|YP_002148575.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264832|ref|ZP_03164906.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245549|ref|YP_002217605.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200387506|ref|ZP_03214118.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204928737|ref|ZP_03219936.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|213426937|ref|ZP_03359687.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213580286|ref|ZP_03362112.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213622354|ref|ZP_03375137.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646868|ref|ZP_03376921.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852846|ref|ZP_03382378.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224585444|ref|YP_002639243.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910327|ref|ZP_04654164.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289811587|ref|ZP_06542216.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
 gi|289824292|ref|ZP_06543885.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25512154|pir||AC0982 probable outer membrane protein STY4157 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16422210|gb|AAL22505.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16504969|emb|CAD07983.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139787|gb|AAO71352.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62129780|gb|AAX67483.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|160867165|gb|ABX23788.1| hypothetical protein SARI_03994 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161366074|gb|ABX69842.1| hypothetical protein SPAB_04529 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404998|gb|ACF65220.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408718|gb|ACF68937.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194457283|gb|EDX46122.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713577|gb|ACF92798.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632363|gb|EDX50847.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213855|gb|ACH51252.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243087|gb|EDY25707.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197291562|gb|EDY30914.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940065|gb|ACH77398.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199604604|gb|EDZ03149.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204322170|gb|EDZ07368.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205325701|gb|EDZ13540.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205333235|gb|EDZ19999.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205338706|gb|EDZ25470.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205344463|gb|EDZ31227.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|224469972|gb|ACN47802.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|267995894|gb|ACY90779.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312914671|dbj|BAJ38645.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320088065|emb|CBY97827.1| Inner membrane lipoprotein yiaD Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226700|gb|EFX51750.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322613966|gb|EFY10902.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620335|gb|EFY17203.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625340|gb|EFY22167.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629993|gb|EFY26766.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634183|gb|EFY30918.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635916|gb|EFY32625.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643166|gb|EFY39740.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644613|gb|EFY41149.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650855|gb|EFY47247.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652981|gb|EFY49316.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659944|gb|EFY56184.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663277|gb|EFY59481.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668763|gb|EFY64916.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674434|gb|EFY70527.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678358|gb|EFY74419.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680864|gb|EFY76898.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687200|gb|EFY83173.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322716635|gb|EFZ08206.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323132006|gb|ADX19436.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323192159|gb|EFZ77392.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200663|gb|EFZ85737.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201373|gb|EFZ86439.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206773|gb|EFZ91727.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211797|gb|EFZ96629.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216156|gb|EGA00884.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220379|gb|EGA04833.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226236|gb|EGA10451.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228356|gb|EGA12487.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234177|gb|EGA18265.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237162|gb|EGA21229.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244681|gb|EGA28685.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249162|gb|EGA33080.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250719|gb|EGA34599.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257594|gb|EGA41281.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262303|gb|EGA45864.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266142|gb|EGA49633.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268777|gb|EGA52235.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625391|gb|EGE31736.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629887|gb|EGE36230.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332990496|gb|AEF09479.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 220

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|88857596|ref|ZP_01132239.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
 gi|88820793|gb|EAR30605.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
          Length = 293

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 77/227 (33%), Gaps = 8/227 (3%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
               K  +  ++ +F           ++      ++  +     D  +   + +   L  
Sbjct: 70  EQPSKDPELADHLVFIAERKVDIAQAESQRRYLEQQRSEFIAERDNMQLEARIKESELAK 129

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           LS  +      + +      K  +  +     +I   +     R     S+I      +F
Sbjct: 130 LSATQAKDEAAQAQQNLYYAKQETAGAKQKVKDIQHQLDQLDARNSARGSVI-TLGDVLF 188

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           D + S   P  I  L K+   L  + +   +I GHTD        + N  LS  RA S  
Sbjct: 189 DFNKSDIKPAAISHLAKLATFLNTNIDRNITIEGHTDNI---GSKKFNLLLSQRRADSIK 245

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             L+  GV+  RI   SG       I +        NRR+++++ + 
Sbjct: 246 DYLIGQGVARGRIQT-SGKGISLPVIDNTTADHREQNRRVEVIISEP 291


>gi|330807745|ref|YP_004352207.1| outer membrane protein OmpA [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375853|gb|AEA67203.1| putative lipoprotein; putative outer membrane protein, OmpA
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 263

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +     ++  +  +        D        ++   + +    +   +   +     A
Sbjct: 40  QADPAATKVAALETKDAADFLAKADKAYMDKEDEAKVDQLAYLTNQRVEVAKQTIALRNA 99

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K   D   +            +   +  + T  G L++  D     +F  + S   
Sbjct: 100 EAELKNAGDERARALLDARNAQIKQLQDSLNAKQTERGTLVTFGD----VLFATNKSDLR 155

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  + K+ + L  + +    I G+TD++        N  LS  RA S    L+K GV
Sbjct: 156 ASGMTNVSKLAQFLQENPDRKVIIEGYTDST---GSDSYNQSLSERRASSVQLALVKMGV 212

Query: 305 SEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
              RI    G+        +      + NRR+++ + +  
Sbjct: 213 DPARIVT-QGYGKEFPVADNTSVSGRAMNRRVEVTISNDN 251


>gi|85704529|ref|ZP_01035631.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
 gi|85670937|gb|EAQ25796.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
          Length = 321

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I+ +     F  +S+     +  +L  + +++    +  I I GHTD+      A  
Sbjct: 207 RFDILSRTGNIYFKPASAQLDGASGPLLDAVAQIVTRCPDLTIQIAGHTDSF---GSAAA 263

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           N  LS  RA S    L    VS  R+  + G+   R    +        NRRI+  + D
Sbjct: 264 NQTLSERRAQSVVDYLATRDVSPSRLIAL-GYGETRPVADNSTEQGRRENRRIEFSISD 321


>gi|332995852|gb|AEF05907.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Alteromonas sp. SN2]
          Length = 202

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 10/203 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     +   +         +          +       S+    A         +   +
Sbjct: 2   AASLAVAGCANDPSNSQKGAAIGAVMGALIGKATGDNDKSRYAWGAAVGAIAGGAIGGYM 61

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L ++    GV        + + +        F   SS   P    VLQ + +V+
Sbjct: 62  DKQEEALRSELSDTGVQVVREGDNLRLIMPGDIT---FATDSSSISPNFNPVLQDVAKVV 118

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +  + +  I+GHTD +      + N  LS  RA +   VL+   V+  RI+ + G   +
Sbjct: 119 NNYEKTVLMIKGHTDDT---GSEQYNQGLSERRAGAVRNVLLNYSVNSTRITTV-GMGEY 174

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
           + K+ +D   +   NRR+++ ++
Sbjct: 175 QPKVPNDTAANRSMNRRVELEIQ 197


>gi|218778089|ref|YP_002429407.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218759473|gb|ACL01939.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 377

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E    ++KI  +L  +    + + GHTD    +     N +LSL+RA + 
Sbjct: 275 FDFDSYEIKKEYQSCIKKIVAILRANPGLKLIVEGHTDN---KGSKAYNDKLSLNRADAV 331

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              ++  G+  +R+S   G+   +   ++D     + NRR+ + 
Sbjct: 332 IDSMVGKGIMPERLSA-KGYGFSKPVASNDTEEGRARNRRVQLT 374


>gi|167990874|ref|ZP_02571973.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205330659|gb|EDZ17423.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
          Length = 220

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|325525952|gb|EGD03644.1| hypothetical protein B1M_15465 [Burkholderia sp. TJI49]
          Length = 360

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF    +        ++ KI   +A     
Sbjct: 227 LKDEIAAGTVSVDEDARRSAVTF---RGDAMFLPGGASVQASMNPLIAKIAAEIAKVPGK 283

Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R+     N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 284 VTIIGYTDNVPIRSRQFSSNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 342

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 343 RTAQGRAQNRRVEI 356


>gi|260591686|ref|ZP_05857144.1| OmpA family protein [Prevotella veroralis F0319]
 gi|260536329|gb|EEX18946.1| OmpA family protein [Prevotella veroralis F0319]
          Length = 288

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q    + S         +  ++ +       +    +   ++     ++ K +   L 
Sbjct: 60  EDQLAQARESAAALQGSLDNSLRNANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 119

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +++ L+  ++   +K V  +  +  + IS+ D     ++   S          L KI 
Sbjct: 120 MVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRAEQTLSKIA 176

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           +++   ++    I G+TD  P           R+NW LS  RA S  Q L     V+  R
Sbjct: 177 KIITDYSDYDVLIEGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDHFNVNPKR 236

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           ++   G   +     +D       NRR  I++  +
Sbjct: 237 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 270


>gi|93006911|ref|YP_581348.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92394589|gb|ABE75864.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 217

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV  +    G +  ++    +  F    +         L K+  
Sbjct: 73  YMERQARQLEQQMAGTGVTVKPNANGNIDLVM--PGSITFSFDDATLNNSFKPTLDKLAA 130

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +       I+I GHTD+   +     N +LS DRAY+    L   GV+ +RI+ +  + 
Sbjct: 131 TMNEYNQNTITIAGHTDS---KGTDAYNMKLSRDRAYAVANYLSARGVASNRIN-VVAYG 186

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
             R    ++       NRR+++ V   Q
Sbjct: 187 ESRPVADNNSEFGRQQNRRVELTVNAPQ 214


>gi|298377743|ref|ZP_06987694.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
 gi|298265446|gb|EFI07108.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
          Length = 280

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 53  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 112

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 113 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 169

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 170 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 229

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 230 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 267


>gi|161526078|ref|YP_001581090.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189349207|ref|YP_001944835.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
 gi|160343507|gb|ABX16593.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189333229|dbj|BAG42299.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
          Length = 316

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              +     E    +  + + Q +A  +++TL+      I  G+    +  G+L   +  
Sbjct: 152 QLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYT--IKNGLRVSASEQGLLDQTLAN 209

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           R    F+  S+   P+   +L ++   LA        I GHTD          N  LS  
Sbjct: 210 RTIE-FETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN---SGNRTSNIALSQA 265

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +    L+  G++  +++  +G    +    +D     + NRRI+  V
Sbjct: 266 RADAVKGYLITKGIAPQQMTT-TGVGPDQPIAPNDTAEGRARNRRIEFRV 314


>gi|260778449|ref|ZP_05887341.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604613|gb|EEX30908.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 222

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 18  QATQRQNATTGESETNSVTKGALLGALAGAAVGLATGDDATERRQHALIGAAGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L  ++   N   F   S    P     L+ 
Sbjct: 78  VGYYFDQQEAALRKELLDSGVQVERVGENQL--MLRMENGIGFQTGSYNLDPSIHNTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + ++L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     
Sbjct: 136 VAKILVEYPDTSLVIEGHTDST---GSDTTNQVLSERRAESVRSYLISQGVASGRAIA-R 191

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G         ++       NRR++I + 
Sbjct: 192 GNGERFPLCTNNTSEGRACNRRVEIKIL 219


>gi|23099999|ref|NP_693465.1| motility protein B [Oceanobacillus iheyensis HTE831]
 gi|22778230|dbj|BAC14500.1| motility protein B (flagellar motor rotation) [Oceanobacillus
           iheyensis HTE831]
          Length = 257

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
             S             +    +EN       ++   +    + LQ L  +I+  +     
Sbjct: 60  AGSGVLDHQEIPVPPPEQEEVDENEDSEEQDEQLSKSESELRDLQALQTQINHFIQEH-- 117

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267
             + + +  E T  G++I++    N   FD  S+     +  +   +  +L       + 
Sbjct: 118 -ELTEQLGTELTDEGLMITL---VNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPHQVV 173

Query: 268 IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASD 325
           I GH D  P        NW LS+ RA +   + L    +    +    G+   +  + + 
Sbjct: 174 ISGHADDVPIETEEYNSNWELSVSRAINFMTLILENEELDPT-LFSAKGYGEFQPIVPNT 232

Query: 326 PM--NSANRRIDILVE 339
                + NRR+++L+ 
Sbjct: 233 SAENRAKNRRVEVLIL 248



 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 5/229 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++       +   SW + YAD +T+L+A F+V++ ++  +    + +   F         
Sbjct: 3   RRGKKKSQSHMDESWLLPYADLLTLLVALFIVLFAMSDINIQKYEQLASVFR---SEFSN 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A  G+ D Q  P    + + ++  +E   +    L    +  +           ++   +
Sbjct: 60  AGSGVLDHQEIPVPPPE-QEEVDENEDSEEQDEQLSKSESELRDLQALQTQINHFIQEHE 118

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +E     LT +      + +      S   +E           +L  +   ++      
Sbjct: 119 LTEQLGTELTDEGLMITLVNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPHQVVISGHA 178

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLP 246
               +     ++  +  +        LI   ++ +  +F  K      P
Sbjct: 179 DDVPIETEEYNSNWELSVSRAINFMTLILENEELDPTLFSAKGYGEFQP 227


>gi|313677015|ref|YP_004055011.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943713|gb|ADR22903.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 670

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           + +          +          FD  SS    E++  L+ I ++L +S +  + I GH
Sbjct: 538 QEIDVSILLDEAEVGTKMVLKNIFFDTGSSDLRTESLGELKVIKDLLTNSPDLRVQINGH 597

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---N 328
           TD       +  N  LS  RA S    L+ +G++ +R+    GF   +  +++D      
Sbjct: 598 TDNV---GNSVYNKLLSKKRAQSVVDYLIANGINSERLEA-KGFGEEKPLVSNDDEIGGR 653

Query: 329 SANRRIDILVED 340
             NRR +I +  
Sbjct: 654 EINRRTEIEILG 665


>gi|239813534|ref|YP_002942444.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus S110]
 gi|239800111|gb|ACS17178.1| type IV / VI secretion system protein, DotU family [Variovorax
           paradoxus S110]
          Length = 442

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 8/140 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++ +   R    F   S+ P+  ++ VL++IG+ LA     
Sbjct: 297 LEPEIKQGLVTVTDEADRSVVRL---RGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGE 353

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GH+D  P R+     NW LS  RA +    L    V   R+    G A      A+
Sbjct: 354 VLITGHSDNQPIRSLRYPSNWHLSAARADAVKGALTTL-VEPARMRS-DGKADAEPVAAN 411

Query: 325 DP--MNSANRRIDILVEDRQ 342
           D     + NRR+DI++    
Sbjct: 412 DTPANRARNRRVDIVLLSEP 431


>gi|228987761|ref|ZP_04147872.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772035|gb|EEM20490.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 234

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLSIAKEMSNLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +   + S + G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-GYGEYRAIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|187477844|ref|YP_785868.1| outer membrane protein A [Bordetella avium 197N]
 gi|585615|sp|Q05146|OMPA_BORAV RecName: Full=Outer membrane protein A; Flags: Precursor
 gi|144052|gb|AAA22979.1| outer membrane protein A [Bordetella avium]
 gi|115422430|emb|CAJ48955.1| outer membrane protein A [Bordetella avium 197N]
          Length = 194

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  G+TD+         N +LS  RA S
Sbjct: 88  FFDFDKSTLKPEGRQLLDQVAQQARAIDLETIIAVGNTDSI---GTEAYNMKLSERRAAS 144

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
               L+  G+  +RI    G        ++      + NRR++I +   +
Sbjct: 145 VKAYLVSKGIDPNRIYT-EGKGKLNPIASNKTAEGRARNRRVEIEIVGSR 193


>gi|320173827|gb|EFW49008.1| putative outer membrane lipoprotein [Shigella dysenteriae CDC
           74-1112]
          Length = 195

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 10/171 (5%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E           + ++        +   +    + L       GV    +   I++++  
Sbjct: 29  EREAGKSAIGAGLDSLVGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNM-- 86

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
             N   FD SS+   P     L  +  VL    +  +++ G+TD++        N RLS 
Sbjct: 87  -PNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDST---GGHDLNMRLSQ 142

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            RA S    L+  GV   RI +  G        ++      + NRR++I +
Sbjct: 143 QRADSVASALITQGVDASRI-RTQGLGPANPIASNSTAEGKAQNRRVEITL 192


>gi|466690|gb|AAB18529.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
          Length = 219

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + +       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEANVRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|83643650|ref|YP_432085.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83631693|gb|ABC27660.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 464

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 13/257 (5%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +       +  D   D+               +  +     +      +  Q  + K   
Sbjct: 211 SAAPAPKDSDRDGVYDDEDACPGTPYGATVDARGCEVIGDADGDGVTDDKDQCPNTKAGA 270

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
             D+     +           K++    P  +K              +   + +      
Sbjct: 271 RVDATGCPVVGDDDADGVPNEKDQCPNSPAAAKVDSRGCPLDTDRDGITDGLDACPDTPY 330

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266
              +            + I++        F  +S+    E +  ++K+ E +    +   
Sbjct: 331 GAKVDNRGCRIQLSETVTITLN-----VTFPTNSAAITDEFVSEVEKLAEFMRQYPDTKA 385

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + GHTD          N +LS  RA +  Q++++  G++ +RIS + G+   R    ++
Sbjct: 386 VVEGHTDDR---GQDAYNQKLSEKRASAVRQMVVERFGIAGERISSV-GYGETRPIGDNN 441

Query: 326 PMNSA--NRRIDILVED 340
             +    NRR+  +VE 
Sbjct: 442 TADGRSANRRVVGVVEA 458


>gi|78049429|ref|YP_365604.1| hypothetical protein XCV3873 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325928969|ref|ZP_08190130.1| flagellar motor protein [Xanthomonas perforans 91-118]
 gi|78037859|emb|CAJ25604.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325540658|gb|EGD12239.1| flagellar motor protein [Xanthomonas perforans 91-118]
          Length = 223

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      + +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     +   L    E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLATPLTHYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|300950898|ref|ZP_07164778.1| OmpA family protein [Escherichia coli MS 116-1]
 gi|300449827|gb|EFK13447.1| OmpA family protein [Escherichia coli MS 116-1]
          Length = 217

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|145298369|ref|YP_001141210.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851141|gb|ABO89462.1| Flagellar motor protein MotB [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 305

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 61/180 (33%), Gaps = 7/180 (3%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           ++  +    E+      S   I  +  K+    LA   +     + +      V      
Sbjct: 80  EVSAASAVLESARQDSPSIAPISGVPIKQDGTTLATIDTQLQENMGSLVEAGVVKLTLDD 139

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280
             + + +    +  +F   S+        VL  +  +L      + +RG+TD     N  
Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNAEPVLNTLSSILKPVDNYVRVRGYTDNQQINNEI 196

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            R NW LS  RA +    L+  GV+  R+     +        +D       NR++ + +
Sbjct: 197 FRSNWTLSAARAEAVLTALIAKGVAPQRL-AYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255



 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 50/143 (34%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + K+         +L  W + YAD+MT++ A F+V++ +   + D  +A+          
Sbjct: 1   MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +   S G+ +       + +     ++ E   ++S  +   S    KQ       I    
Sbjct: 61  MPPRSDGLLEGLGTSLLNGEVSAASAVLESARQDSPSIAPISGVPIKQDGTTLATIDTQL 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158
                   +  + + +     L 
Sbjct: 121 QENMGSLVEAGVVKLTLDDNWLT 143


>gi|58866398|gb|AAW82963.1| Omp52 [Leptospira santarosai serovar Shermani]
          Length = 456

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 12/183 (6%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           + ++ K +  E    +   S  K  +    K+     ++  +      A +    V    
Sbjct: 279 AEEVRKILGGELPTGIESGSDPKKGSKNFPKQTLSWPEEEENKTKPETAKSSGPPVEIRR 338

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278
           T  GI IS+    N+ +FD +SS    E  + L+KI  VL    +  I I GHTD     
Sbjct: 339 TEEGIAISL----NSVLFDHNSSQLKDEAKLELKKIASVLKKYEDREIRISGHTDN---S 391

Query: 279 NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
                N +LS +RA S  + L  + G+ E R+    G+   +    +        NRR+D
Sbjct: 392 GGDEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSKPIADNSTIQGRQKNRRVD 450

Query: 336 ILV 338
           I +
Sbjct: 451 ITI 453


>gi|328553736|gb|AEB24228.1| flagellar motor protein MotB [Bacillus amyloliquefaciens TA208]
          Length = 265

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 7/190 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             ++        K++        KE+    +     Q+L          +    +   + 
Sbjct: 72  PPENEKDGIDQLKKDKDKEKEKDKEQKKKEREAADRQELEGVQKQVNQFIKNKKLEHQLE 131

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDAS 275
            + T+ G+LI+I D      FD   ++   E I + ++I  +L  +    I I GHTD  
Sbjct: 132 TKLTKEGLLITIKDS---IFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTDNV 188

Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           P +N     NW LS+ RA +   +L ++   + ++    GF  ++   ++        NR
Sbjct: 189 PIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSKNR 248

Query: 333 RIDILVEDRQ 342
           R+++L++ R 
Sbjct: 249 RVEVLIQPRN 258


>gi|120435967|ref|YP_861653.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578117|emb|CAL66586.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 235

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 17/155 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++   AK+I   + G   + + +G+              D+ +   FD        ++  
Sbjct: 78  KMDKQAKQIEEEIPGAEVERVGEGINVT----------FDESSGVYFDTEKYNINAKSQT 127

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L K+ ++     +  + + GHTD +        N  LS +RA +    L+ +G+   R 
Sbjct: 128 TLNKLADIFKEYPQSNVLVEGHTDDT---GSDSYNLTLSKNRAQAVTGYLVDNGIDRGRF 184

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           +    +   + K  +      S NRR+++ +   +
Sbjct: 185 TT-KWYGESQPKYDNTTADGRSKNRRVELAIVANE 218


>gi|27366879|ref|NP_762406.1| flagellar motor protein [Vibrio vulnificus CMCP6]
 gi|27358446|gb|AAO07396.1|AE016809_158 Flagellar motor protein [Vibrio vulnificus CMCP6]
          Length = 442

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            +     L  +  +  +  +     + I+        +F+  S+  +     V+ K+   
Sbjct: 289 ANQIQRSLATEIEMVLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345

Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   I + GHTD +P   +    NW LSL RA +    L  +G    R+    G   
Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGD 404

Query: 318 HRLKIASDPMNSA--NRRIDI 336
            R  ++++       NRR++I
Sbjct: 405 ARPLVSNETAEGRSINRRVEI 425


>gi|5081415|gb|AAD39370.1|AF117975_1 outer membrane protein OprF [Pseudomonas stutzeri ZoBell]
          Length = 321

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  + + GHTD+       + N RLS  RA + 
Sbjct: 222 FDFDKSRVREESYSDIKNLADFMQQYPQTTTTVEGHTDSV---GTDQYNQRLSERRAEAV 278

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             VL+ + GV  +R++ + G+   R    +        NRR++
Sbjct: 279 RNVLVNEHGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 320


>gi|82545917|ref|YP_409864.1| outer membrane lipoprotein [Shigella boydii Sb227]
 gi|187734257|ref|YP_001882255.1| putative outer membrane lipoprotein [Shigella boydii CDC 3083-94]
 gi|81247328|gb|ABB68036.1| putative outer membrane protein [Shigella boydii Sb227]
 gi|187431249|gb|ACD10523.1| OmpA family protein [Shigella boydii CDC 3083-94]
 gi|320187083|gb|EFW61791.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
 gi|332089323|gb|EGI94427.1| inner membrane lipoprotein yiaD [Shigella boydii 3594-74]
          Length = 219

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|239993109|ref|ZP_04713633.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Alteromonas macleodii ATCC 27126]
          Length = 213

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L  +    GV        + + +        F   SS   P    VLQ + 
Sbjct: 68  NYMDKQEEELRNELSDTGVQVVREGDNLRLIMPGDIT---FATDSSSISPNFNPVLQDVA 124

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +V+ +  + +  I+GHTD +      + N  LS  RA +   +L+   V+  RI+ + G 
Sbjct: 125 KVVNNYEKTVLMIKGHTDDT---GSEQYNQSLSERRAGAVKNLLINYSVNPTRITTV-GM 180

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
             +  K+ ++   +   NRR+++ ++
Sbjct: 181 GEYAPKVPNNSAANRSMNRRVEMEIQ 206


>gi|170697801|ref|ZP_02888887.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           ambifaria IOP40-10]
 gi|170137303|gb|EDT05545.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           ambifaria IOP40-10]
          Length = 433

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 10/167 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                + K+     +           +   L G   +     V  +       ++    R
Sbjct: 270 SRSADVQKQIADIARMTPPPAPPQLHLKQLLQG---EIAAGTVSVDEDARHSAVTF---R 323

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291
              MF    +        ++ KI   +A     ++I G+TD  P R+     N  LS +R
Sbjct: 324 GDAMFKPGGASVQASMNPLVSKIAAEIAKVPGKVTIIGYTDNVPIRSRHFASNQVLSEER 383

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           A    Q+L  +GV  +R+  + G         +      + NRR++I
Sbjct: 384 ATLVMQMLQAAGVPANRLEAV-GKGDADPVGDNRTAQGRAQNRRVEI 429


>gi|83854840|ref|ZP_00948370.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
 gi|83842683|gb|EAP81850.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
          Length = 582

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 16/250 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              ++ +  +  +T   ++   L N        Q  E         +       +   L 
Sbjct: 336 DAARSKLAQEEAATAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAAKEVQLQSLG 395

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             +N           +   L    + RL+   K +    S        + +L       I
Sbjct: 396 SDLNTALARVAAEERRRAELEAAERARLEAETKNLEQYRSEFFGRL--RALLGNQEGVRI 453

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP 276
                   +  +F   ++    +    + K+  +L             VI + GHTD  P
Sbjct: 454 EGDRFVFSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQP 513

Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
                   DNW LS  RA S  + ++   G++ +R+   +GF  ++   + +     + N
Sbjct: 514 LSGLGEFADNWELSQARALSVVKYMINFLGIAPERL-AANGFGQYQPVASGNTEAARAQN 572

Query: 332 RRIDILVEDR 341
           RRI++ + +R
Sbjct: 573 RRIELKLTER 582


>gi|329117988|ref|ZP_08246701.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465876|gb|EGF12148.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 226

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 10/173 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                    +  A+        +   +      L  +    GV  + +   I + + +  
Sbjct: 50  ALSHGSKGARNSALACGAVGAGVGGYMDYQEKKLRENLANTGVDVQRSGDQIKLVMPENV 109

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+         L    + L    +   SI GHTD +        N  LS  R
Sbjct: 110 T---FATGSATLSTNAQNALAAAAQTLTQYPDTTLSINGHTDNT---GSDAINAPLSQRR 163

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           A +    L   GV+  R+    G    +   ++      + NRR++IL+   Q
Sbjct: 164 AQAVASFLQSRGVNGSRL-ATYGHGSRQPVASNATAEGRAQNRRVEILINPDQ 215


>gi|322418609|ref|YP_004197832.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320124996|gb|ADW12556.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 426

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     L+ +G+ L    +    I GHTD++        N RLS  RA + 
Sbjct: 314 FDTDKWNIKPRYHAELKTVGDFLNQFPDAYGEISGHTDSTH---TDDYNQRLSERRAKAV 370

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
              ++K+  +   R+    G+   R    +      + NRRI+
Sbjct: 371 RDYIVKNFKIDPKRL-TGKGYGEKRPMATNKTAVGRAKNRRIE 412


>gi|110807356|ref|YP_690876.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
 gi|229088112|ref|NP_709330.3| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
 gi|229089132|ref|NP_839340.2| putative outer membrane lipoprotein [Shigella flexneri 2a str.
           2457T]
 gi|110616904|gb|ABF05571.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
 gi|281602912|gb|ADA75896.1| putative outer membrane protein [Shigella flexneri 2002017]
 gi|313647591|gb|EFS12041.1| inner membrane lipoprotein yiaD [Shigella flexneri 2a str. 2457T]
 gi|332750012|gb|EGJ80424.1| inner membrane lipoprotein yiaD [Shigella flexneri K-671]
 gi|332750169|gb|EGJ80580.1| inner membrane lipoprotein yiaD [Shigella flexneri 4343-70]
 gi|332751243|gb|EGJ81646.1| inner membrane lipoprotein yiaD [Shigella flexneri 2747-71]
 gi|332997456|gb|EGK17072.1| inner membrane lipoprotein yiaD [Shigella flexneri K-218]
 gi|333012432|gb|EGK31813.1| inner membrane lipoprotein yiaD [Shigella flexneri K-304]
          Length = 216

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 77  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 133

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 134 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 189

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 190 PANPIASNSTAEGKAQNRRVEITL 213


>gi|262280028|ref|ZP_06057813.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262260379|gb|EEY79112.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 217

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYSTLDKVAQ 133

Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA  +   I + G+TD +        N  LS  RA S    L   G+S  RI    G+ 
Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQSRAQSVKNYLAGKGLSSSRIDA-QGYG 189

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +    NRR++I +  +Q
Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217


>gi|5081413|gb|AAD39368.1|AF117973_1 outer membrane protein OprF [Pseudomonas stutzeri DSM 4166]
          Length = 323

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+       + N RLS  RA + 
Sbjct: 224 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 280

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             VL+ + GV  +R++ + G+   R    +        NRR++
Sbjct: 281 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 322


>gi|317502696|ref|ZP_07960808.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
 gi|315666182|gb|EFV05737.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
          Length = 225

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 9/141 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  +  + +  V+ V        + ++     +  +F  + +     +   L K  +VL 
Sbjct: 74  AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTASSKNDLVKFSKVLK 130

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +++  + I GHTD +        N  LS  RA S    L   GVS  +   + G     
Sbjct: 131 DNSDCHVDIYGHTDNT---GNDAINIPLSNRRAESVVNYLKSCGVSSSQFQNVVGKGSSE 187

Query: 320 LKIASDPMNSA--NRRIDILV 338
               +        NRR+++ +
Sbjct: 188 PVADNSTAAGRKQNRRVEVYL 208


>gi|302339235|ref|YP_003804441.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301636420|gb|ADK81847.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 340

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 8/249 (3%)

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                I ++ +   +   + LK    + +K            S + + E           
Sbjct: 98  DDGTLIRIAENSQASIADISLKETDISLEKGRIISRFQKITGSGNHRVETPNAVCGIRGT 157

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           +                       P   E  + +  +++ +     + S    +  + + 
Sbjct: 158 ELIFDAGQEGTTIYGMSGLTEVASPDHPENPVLLGFQQKTRVNQGALPSPPEEMSDEEVA 217

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
              +   +    ++ ++   +T  F   S+   PE+   L +I  +L      + I GHT
Sbjct: 218 YFRMLLDSLHNEVVVLV--TSTLSFKPDSAELTPESGEELSRIASILKKKRIEVEIAGHT 275

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
                       + LSL RA S  + L+  GV E R+  + G+   R   ++D     + 
Sbjct: 276 ADV---GDRASQYTLSLQRAESVKRTLVSLGVKERRL-SVKGYGGSRPIASNDSQEGRAQ 331

Query: 331 NRRIDILVE 339
           NRR++ LV 
Sbjct: 332 NRRVEFLVR 340


>gi|168260613|ref|ZP_02682586.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350258|gb|EDZ36889.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 220

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGADTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|197124706|ref|YP_002136657.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196174555|gb|ACG75528.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 206

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +++ +   +FD  SS   PE I  L+++G+VLA    + I I G+TDA+        N  
Sbjct: 91  LVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRIRIEGYTDAT---GSKSMNEE 147

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           LSL RA +  +VL+  GV E +I+ + G    R    +      + NRR+++ ++   
Sbjct: 148 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGTASGRAQNRRVELHIDVPN 204


>gi|257451630|ref|ZP_05616929.1| Outer membrane porin F [Fusobacterium sp. 3_1_5R]
 gi|257466946|ref|ZP_05631257.1| Outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
          Length = 183

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 15/155 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + +    K +   +          GV        +++S+       +FD +         
Sbjct: 41  EDIDAAKKPLEDIIV-----FNQDGVTIRREGNNLILSM---PELILFDFNKYEVKNGIK 92

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L+ +   L  + ++   I G+TD   F      N  LS++RA +    L+  G  E+ 
Sbjct: 93  PSLRTLANALGANADIKIKIDGYTD---FIGSEGYNLELSVNRAKAIKSYLVAQGAIENN 149

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           I  I G+       ++D     + NRR++ ++   
Sbjct: 150 I-SIEGYGKQNPVASNDTESGRARNRRVEFIISRS 183


>gi|156936282|ref|YP_001440198.1| putative outer membrane lipoprotein [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156534536|gb|ABU79362.1| hypothetical protein ESA_04181 [Cronobacter sakazakii ATCC BAA-894]
          Length = 220

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD S +   P     L  +  
Sbjct: 80  YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSQANLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N +LS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GGQALNMKLSQQRAESVASALITQGVAANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPVASNSTEEGKAQNRRVEITL 216


>gi|332143465|ref|YP_004429203.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553487|gb|AEB00206.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 213

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L  +    GV        + + +        F   S+   P    VLQ + 
Sbjct: 68  NYMDKQEEELRTELSDTGVQVVREGDNLRLIMPGDIT---FATDSASISPNFNPVLQDVA 124

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +V+ +  + +  I+GHTD +      + N  LS  RA +   +L+   V+  RI+ + G 
Sbjct: 125 KVVNNYEKTVLMIKGHTDDT---GSEQYNQSLSERRAGAVKNLLINYSVNPTRITTV-GM 180

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
             +  K+ ++   +   NRR+++ ++
Sbjct: 181 GEYSPKVPNNSAANRSMNRRVEMEIQ 206


>gi|78778212|ref|YP_394527.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
 gi|78498752|gb|ABB45292.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
          Length = 348

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S      ++  +++  E L         I GHTD+       +DN +LS +RA S 
Sbjct: 245 FDTASYKVDNASMPKVKEFAEFLKDMPNYNAKIVGHTDSV---GSDKDNQKLSENRANSV 301

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
             +++K G+   RI+   G         +D     + NRRI+
Sbjct: 302 KTLIVKEGIDTKRITT-EGKGEKSPIATNDTKEGKAQNRRIE 342


>gi|5081411|gb|AAD39366.1|AF117971_1 outer membrane protein OprF [Pseudomonas stutzeri LMG 11199T]
          Length = 328

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+       + N RLS  RA + 
Sbjct: 224 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 280

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             VL+ + GV  +R++ + G+   R    +        NRR++
Sbjct: 281 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 322


>gi|5081412|gb|AAD39367.1|AF117972_1 outer membrane protein OprF [Pseudomonas stutzeri A15]
          Length = 321

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+       + N RLS  RA + 
Sbjct: 222 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 278

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             VL+ + GV  +R++ + G+   R    +        NRR++
Sbjct: 279 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 320


>gi|229019729|ref|ZP_04176535.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
 gi|229025955|ref|ZP_04182345.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
 gi|228735356|gb|EEL85961.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
 gi|228741574|gb|EEL91768.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
          Length = 234

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEVEQARKQEEARAEEKKEMAELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
              + +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---NQLSSAFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKELSNLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSTI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|332828413|gb|EGK01122.1| hypothetical protein HMPREF9455_02644 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 224

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +       V        I ++     +  +F  +SS     +   L      L ++ 
Sbjct: 80  KKELEQINGAQVESINDGQAIKVTF---ESGILFATNSSTLNSASQSALTSFATSLNNNP 136

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD +        N  LS  RA S Y  L   GVS  R+    GF   +   
Sbjct: 137 DTDVQIYGHTDNT---GSDAINNPLSEKRAQSVYNFLQTKGVSGSRMVS-QGFGSTQPVA 192

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      S NRR++I +   +
Sbjct: 193 DNSTVAGRSQNRRVEIYILPNE 214


>gi|146306454|ref|YP_001186919.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145574655|gb|ABP84187.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 210

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+         N  LS  RA + 
Sbjct: 105 FDFDKSQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSV---GSDAYNQGLSERRANAV 161

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            +VL+   GV  +R+  + G+   R    +        NRR++  VE 
Sbjct: 162 REVLVNQYGVESNRVQAV-GYGESRPVADNATAEGRAINRRVEAEVEA 208


>gi|315918088|ref|ZP_07914328.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058194|ref|ZP_07922679.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
 gi|313683870|gb|EFS20705.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
 gi|313691963|gb|EFS28798.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
          Length = 189

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 15/155 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + +    K +   +          GV        +++S+       +FD +         
Sbjct: 47  EDIDAAKKPLEDIIV-----FNQDGVTIRREGNNLILSM---PELILFDFNKYEVKNGIK 98

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L+ +   L  + ++   I G+TD   F      N  LS++RA +    L+  G  E+ 
Sbjct: 99  PSLRTLANALGANADIKIKIDGYTD---FIGSEGYNLELSVNRAKAIKSYLVAQGAIENN 155

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           I  I G+       ++D     + NRR++ ++   
Sbjct: 156 I-SIEGYGKQNPVASNDTESGRARNRRVEFIISRS 189


>gi|149277257|ref|ZP_01883399.1| lipoprotein PG3 [Pedobacter sp. BAL39]
 gi|149232134|gb|EDM37511.1| lipoprotein PG3 [Pedobacter sp. BAL39]
          Length = 226

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                 N +          GI++      +  +F    +    +    ++ +   L    
Sbjct: 81  QAAEIQNAIPNAEVIREGEGIIVKF---DSGILFGFDKADLTAQAKTNVKSLAGSLNQYP 137

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I + GHTD    +     N  LS  RA +     +  GV   R+  + G        
Sbjct: 138 GTDIKVIGHTDN---KGTETYNMGLSERRAAAVKAYAVSQGVPSSRLITV-GKGFSEPID 193

Query: 323 ASDPM--NSANRRIDILV 338
            +      +ANRR+++++
Sbjct: 194 DNSTEAGRAANRRVEVVI 211


>gi|291615624|ref|YP_003518366.1| YiaD [Pantoea ananatis LMG 20103]
 gi|291150654|gb|ADD75238.1| YiaD [Pantoea ananatis LMG 20103]
          Length = 237

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 97  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSSLKPAGANTLTGVAM 153

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ GHTD++        N RLS  RA S    L+  GV+ +R+    G  
Sbjct: 154 VLKEYPKTAVNVVGHTDST---GSRALNMRLSQQRAESVASALIVQGVAGNRLHT-QGAG 209

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 210 PDSPVATNSTEAGKAQNRRVEITL 233


>gi|206560984|ref|YP_002231749.1| putative OmpA family membrane protein [Burkholderia cenocepacia
           J2315]
 gi|198037026|emb|CAR52947.1| putative OmpA family membrane protein [Burkholderia cenocepacia
           J2315]
          Length = 215

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  SI G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVNGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|114776497|ref|ZP_01451542.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Mariprofundus ferrooxydans PV-1]
 gi|114553327|gb|EAU55725.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Mariprofundus ferrooxydans PV-1]
          Length = 499

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 93/242 (38%), Gaps = 17/242 (7%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            I  +S +  +  T   K    +      L+  +++   +    +   + +   +  +  
Sbjct: 271 DIDTDSNNPMLSRTQPAKIIAAVREMKQTLATERKARKAERVQLKQQYETELKARLAEET 330

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             ++K +   +  + +     ++R+   Q   +++ +       + +            +
Sbjct: 331 SQLSKAQQSQMSNIKEAFQAKLERETYEQKRQQRLRALFKPNQVELLAN----------L 380

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283
             SI+ + +   F   SS    +   +L ++ E  A   +    I GHTD    +   + 
Sbjct: 381 DGSILMRLSALKFASGSSKINAKYYDMLGQVKEAFAIYADRKIRIEGHTDN---KGDVKV 437

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           N RLSL RA +    L+ +G    R+  + G+   R   ++  D   + NRRID+++E  
Sbjct: 438 NQRLSLKRAEAVRDFLIAAGADGSRLKAL-GYGEVRPIASNEFDRGRAMNRRIDVVIEAP 496

Query: 342 QG 343
            G
Sbjct: 497 AG 498


>gi|126666899|ref|ZP_01737875.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
 gi|126628615|gb|EAZ99236.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
          Length = 232

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       GV        I + +        FD + +    +    L+ +  
Sbjct: 92  YMDRQEVQLRQQLEGTGVRVVRNGDEISLVM---PGNITFDLNQTSIRSQFAGTLESVAL 148

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    + +I I GHTD+         N  LS  RA S    L+  G+ E R ++  G+ 
Sbjct: 149 VLKEFDQTIIQIEGHTDSQ---GGDSYNQLLSERRASSVRDFLLNQGI-ESRRTRAVGYG 204

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                 ++D       NRR+++ +
Sbjct: 205 ERYPVASNDTSGGREQNRRVELTL 228


>gi|187922936|ref|YP_001894578.1| hypothetical protein Bphyt_0935 [Burkholderia phytofirmans PsJN]
 gi|187714130|gb|ACD15354.1| type IV / VI secretion system protein, DotU family [Burkholderia
           phytofirmans PsJN]
          Length = 414

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF             ++ KI   +      
Sbjct: 281 LKNEIAAGTVSVDEDARHSSVTF---RGDAMFPPGGVNVNASMGPLIAKIASEIGKVPGK 337

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD  P R+     N  LS +RA    Q+L  SGV+  R+  I G         +
Sbjct: 338 VTVTGHTDNLPIRSRQFASNDALSEERATQVMQMLQASGVAAARLEAIGG-GEANPIGDN 396

Query: 325 DPM--NSANRRIDILVE 339
                 + NRR++I V 
Sbjct: 397 ATAQGRAQNRRVEITVT 413


>gi|170698903|ref|ZP_02889963.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170136156|gb|EDT04424.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 247

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153
               I     +   G      +          L   + +    N + +            
Sbjct: 5   TAGTIAPPPANATPGQVVAGGKVSDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 64

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     E    +  + + Q LA  +++TL+      I  
Sbjct: 65  SANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNPTYT--IKN 122

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   L+        I GHT
Sbjct: 123 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 181

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D          N  LS  RA +    L+   +   +++  +G    +    +D     + 
Sbjct: 182 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 237

Query: 331 NRRIDILV 338
           NRRI+  V
Sbjct: 238 NRRIEFRV 245


>gi|116695082|ref|YP_840658.1| OmpA/MotB-family outer membrane protein [Ralstonia eutropha H16]
 gi|113529581|emb|CAJ95928.1| outer membrane protein, OmpA/MotB-family [Ralstonia eutropha H16]
          Length = 435

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           R   MF    +    +    L K+   +      + + GH+D  P ++     N  LS +
Sbjct: 325 RGDDMFGAGRAEVNAKLTPTLNKVAGEINKLQGKVQVIGHSDNQPIKSARYPSNQVLSEE 384

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RA    + L   GV++ R+  I G         +    +   NRR++++V  
Sbjct: 385 RAAMVSEYLASQGVAKRRLEAI-GKGDTEPLTDNKTPAARAANRRVEVVVTQ 435


>gi|317494692|ref|ZP_07953104.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917294|gb|EFV38641.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 219

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    S L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 80  YMDVQESKLRDKMRGTGVSVTRQGDNIILNM---PNNVTFDSSSSTLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   R+ +  G  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSQDLNMRLSQQRADSVASALIVQGVEASRV-RTQGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|238764428|ref|ZP_04625377.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
           33638]
 gi|238697344|gb|EEP90112.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
           33638]
          Length = 538

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 15/186 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +  + +   L  L ++ +L  + +++ + L   +       +   + + +        
Sbjct: 342 PMTHYEPKAQALAALQQDALLLERWQRQGEPLKYSLGLYPGQRLWLALQQAIDTYIPPPP 401

Query: 224 ILISIIDQ-------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275
               +  Q           +FD       P +  +L      +       I + GHTD  
Sbjct: 402 PPTPVEKQTPKTVRLDALSLFDTGKYQLKPGSTKMLVSALIDIRAKPGWLIVVAGHTD-- 459

Query: 276 PFRNIARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
                A  N  LSL RA +     L  S VS      + G+   R    ++     + NR
Sbjct: 460 -ITGDAGANQTLSLKRAEALRDWMLSTSDVSPT-CFAVQGYGATRPIATNESTEGRALNR 517

Query: 333 RIDILV 338
           R++I +
Sbjct: 518 RVEISL 523


>gi|330502392|ref|YP_004379261.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328916678|gb|AEB57509.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 210

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +    E+   ++ + + +    +  ++  GHTD+         N  LS  RA + 
Sbjct: 105 FDFDKAQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSV---GSDAYNQGLSERRASAV 161

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             VL+   GV   R+  + G+   R    +      + NRR++  VE 
Sbjct: 162 RDVLVNQYGVESGRVQAV-GYGESRPVADNATADGRAINRRVEAEVEA 208


>gi|299535178|ref|ZP_07048502.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
 gi|298729299|gb|EFI69850.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
          Length = 250

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            + +     N       ++    +K ++ L ++   + + ++    + +      E T  
Sbjct: 66  EQPAPVPTPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIA---VNEMEDQFATEMTDE 122

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281
           G+L++I D     +FD   +   PE + + +++  +L +     I I GHTD  P     
Sbjct: 123 GLLVTIRDS---ILFDPGQATVKPEYVPIAKELSTMLESDPARNIVITGHTDNVPAGPNF 179

Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             N++LS+ RA    ++L++S   +   R S   G   +R    +D     + NRR+++L
Sbjct: 180 TSNFQLSVMRATKFLELLIESNDKLDPTRFSA-KGNGEYRAIAPNDTAEGRAKNRRVEVL 238

Query: 338 VE 339
           ++
Sbjct: 239 IQ 240



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   SW + YAD +T+L+A F++++  ++ D +  + +   FN             F
Sbjct: 10  HDEHIDESWLVPYADILTLLLAVFIILFASSSVDQEKLERMSAVFNQVFD-----GGTSF 64

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
            EQ  P  +     D +  ++        ++             N +     ++ ++   
Sbjct: 65  LEQPAPVPTPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEDQFATEMTDEGL 124

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
               RDS        +   E     +E   +      
Sbjct: 125 LVTIRDSILFDPGQATVKPEYVPIAKELSTMLESDPA 161


>gi|303248273|ref|ZP_07334535.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302490298|gb|EFL50210.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 246

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 9/172 (5%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P +S     A  R++ + +  +      S +    +   V        I I       
Sbjct: 75  ATPDMSTLVEQARIRQRIIGEQRRVYDQFRSYVSTKGLDGVVAATLEAGKITIGF---PA 131

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASP--FRNIARDNWRLSLD 290
             +F K       E    L+ + + L   + E I+IRG TD  P    +  RDNW +S  
Sbjct: 132 GVLFPKDGVDLTEEGKQRLRTVYDFLIKTAGERINIRGFTDNQPPGAGSRFRDNWEVSSL 191

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA +  + ++  G+  +R++  +G A       +D     + N+R++ ++E 
Sbjct: 192 RAVAVLRYMVSLGMPPNRLTA-TGLADLEPLYPNDTPAHRARNQRVEFVLER 242



 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             D+       W    +D   +LM FF++++ +++ D          F+     L   SK
Sbjct: 11  DDDEEVEASSQWLTTLSDLSMLLMTFFIMLFSMSSLDVKKF---TDSFSSVRNALGNKSK 67

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHI 106
            I          S       I + I
Sbjct: 68  AITTGPIATPDMSTLVEQARIRQRI 92


>gi|296390816|ref|ZP_06880291.1| hypothetical protein PaerPAb_21793 [Pseudomonas aeruginosa PAb1]
          Length = 237

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I I G+TD++      + N  LS  RA S    L   GV   R+S   G    
Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226


>gi|255016489|ref|ZP_05288615.1| putative flagellar motor protein MotB [Bacteroides sp. 2_1_7]
          Length = 280

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++    +   +L RD+       ++     + N  E   L  L ++K+  +  ++R  +
Sbjct: 53  DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 112

Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             + + +  +  V + +              +        + +++ D+    +F   S+ 
Sbjct: 113 ELQDMMNAQNEKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAR 169

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301
                   L K+ EVL    ++   I GHTD+ P       DNW LS+ RA S  ++L K
Sbjct: 170 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 229

Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV+  +I    G         ++     S NRR +I+
Sbjct: 230 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 267


>gi|171060724|ref|YP_001793073.1| hypothetical protein Lcho_4056 [Leptothrix cholodnii SP-6]
 gi|170778169|gb|ACB36308.1| type IV / VI secretion system protein, DotU family [Leptothrix
           cholodnii SP-6]
          Length = 460

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 10/153 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILI------SIIDQRNTPMFDKSSSIPLPET 248
           L   +++         +   +  E     +++      S++  R   +F+  S+      
Sbjct: 282 LNPPVAAVAQPAPQPRLATFLRPEIAEGAVVVRDEVDRSVVTLRGDGLFEPGSATLAAPK 341

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
             +L+++ + LA     + + GHTD+ P R+     NW LS +RA +  ++L+   V+ +
Sbjct: 342 EALLRRVADALAQFGGAVLVTGHTDSQPIRSARFPSNWHLSQERAGAVRELLVSQQVATE 401

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           R+ +  G A     +A+D     + NRR++I +
Sbjct: 402 RV-RAEGRADGEPVVANDSAGNRALNRRVEITL 433


>gi|149202409|ref|ZP_01879382.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
 gi|149144507|gb|EDM32538.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
          Length = 586

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 16/243 (6%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           K+     +    + +  +     +   +          E      ++    +S+  E N 
Sbjct: 345 KLSEEAAQATEAQKQQALLNQQVAALRQQLSGLQALLDESKAREAETEVQLQSLGNELNT 404

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQ 231
            L  ++ E+      ++    L +     L    ++   +       + G+ I       
Sbjct: 405 ALARVAAEERRRRIAEEERARLLEAEKEDLEKYRSEFFGRLRDVLGQQQGVQIVGDRFVF 464

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF--RNIA 281
            +  +F    +         + K+  +L +           V+ + GHTD  P       
Sbjct: 465 SSEVLFAPGEADLSAAGQSEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDNVPIIEGARF 524

Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            DNW LS  RA S  + L    G    R+S  +G+   +     D     + NRRI++ +
Sbjct: 525 ADNWALSQARALSVVRYLTGALGFPAGRLSA-NGYGEFQPVNPEDTPAARAQNRRIELKL 583

Query: 339 EDR 341
             R
Sbjct: 584 TTR 586


>gi|15596030|ref|NP_249524.1| hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
 gi|107100290|ref|ZP_01364208.1| hypothetical protein PaerPA_01001315 [Pseudomonas aeruginosa PACS2]
 gi|116048755|ref|YP_792445.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254239185|ref|ZP_04932508.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
 gi|254245120|ref|ZP_04938442.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
 gi|313105709|ref|ZP_07791972.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
           39016]
 gi|9946728|gb|AAG04222.1|AE004518_3 hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
 gi|115583976|gb|ABJ09991.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126171116|gb|EAZ56627.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
 gi|126198498|gb|EAZ62561.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
 gi|310878474|gb|EFQ37068.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
           39016]
          Length = 237

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I I G+TD++      + N  LS  RA S    L   GV   R+S   G    
Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226


>gi|257457608|ref|ZP_05622775.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
 gi|257444994|gb|EEV20070.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
          Length = 238

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 11/164 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +M   ++ + L   +   +S    +     +   +   GI+IS+        F ++S+  
Sbjct: 76  SMPAMEKGKMLGTALKKAVSIFAPEIKTNKIAVTSDERGIVISLAAD---SFFARNSAEL 132

Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299
              E+   L +I + L+          I GHTD+S         NW LS  RA +    L
Sbjct: 133 NIEESRETLLRIAQFLSDKELAARRFRIEGHTDSSDALSGKWTSNWELSAARAINVLHNL 192

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              G  ED+   I+G+A  R   +++       NRR+DI++ D 
Sbjct: 193 TDFGAQEDKF-SIAGYADTRPVYSNETAEGRAYNRRVDIIILDD 235



 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--PFGKNLMT 78
                      W   Y D +T+++ FF++++  +  D    +A+    +  P G ++  
Sbjct: 3  RKKKGANAPGSGWLTTYGDMVTLMLCFFVMLYEPSEVDITRLQALSASISGDPTGGSISL 62

Query: 79 ASKGIFDEQNPPER 92
          ++  + D  N    
Sbjct: 63 SAGKLADLGNTISS 76


>gi|229175219|ref|ZP_04302735.1| OmpA/MotB domain protein [Bacillus cereus MM3]
 gi|228608355|gb|EEK65661.1| OmpA/MotB domain protein [Bacillus cereus MM3]
          Length = 234

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|205354747|ref|YP_002228548.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858882|ref|YP_002245533.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205274528|emb|CAR39567.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710685|emb|CAR35045.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248795|emb|CBG26648.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301160182|emb|CBW19704.1| putative outer membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
          Length = 209

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 69  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 125

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 126 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 181

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 182 PANPIASNSTAEGKAQNRRVEITL 205


>gi|107099070|ref|ZP_01362988.1| hypothetical protein PaerPA_01000079 [Pseudomonas aeruginosa PACS2]
          Length = 449

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F  +S+    E   +L +I + L      
Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW+LS  RA     +L  +     R +   G +      ++
Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVASN 427

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I V
Sbjct: 428 ASAEGRARNRRVEITV 443


>gi|222035267|emb|CAP78012.1| Inner membrane lipoprotein yiad [Escherichia coli LF82]
 gi|312948118|gb|ADR28945.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|320193935|gb|EFW68568.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
          Length = 219

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTSEGKAQNRRVEITL 216


>gi|221209714|ref|ZP_03582695.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221170402|gb|EEE02868.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 428

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +      +++    R   MF    +        ++ KI   +A     
Sbjct: 295 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQVSMNPLIAKIAAEIAKVPGK 351

Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R      N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 352 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVQANRLEAV-GKGDANPVGDN 410

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 411 RTAQGRAQNRRVEI 424


>gi|152986735|ref|YP_001350031.1| hypothetical protein PSPA7_4687 [Pseudomonas aeruginosa PA7]
 gi|150961893|gb|ABR83918.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
          Length = 237

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I I G+TD++      + N  LS  RA S    L   GV   R+S   G    
Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226


>gi|33595424|ref|NP_883067.1| hypothetical protein BPP0729 [Bordetella parapertussis 12822]
 gi|33599804|ref|NP_887364.1| hypothetical protein BB0815 [Bordetella bronchiseptica RB50]
 gi|33565502|emb|CAE40138.1| putative outer membrane protein [Bordetella parapertussis]
 gi|33567401|emb|CAE31314.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
          Length = 426

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           R   +F+  +         VL ++ E L  +   I +RG+TD  P R      NW LS  
Sbjct: 301 RGDGLFESGAVAVRDRYAPVLARVAEALGQTRGDIVVRGYTDNVPIRTARFPSNWHLSQA 360

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           RA +   V+        R+ +  G         +D       NRR++I V 
Sbjct: 361 RAEAVKAVIDARLGQAGRV-RAEGRGEADPLAPNDTPAGRSVNRRVEITVM 410


>gi|196039232|ref|ZP_03106538.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
 gi|218905736|ref|YP_002453570.1| chemotaxis protein MotB [Bacillus cereus AH820]
 gi|225866485|ref|YP_002751863.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
 gi|196029859|gb|EDX68460.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
 gi|218538809|gb|ACK91207.1| chemotaxis protein MotB [Bacillus cereus AH820]
 gi|225788965|gb|ACO29182.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
          Length = 262

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255


>gi|83718754|ref|YP_443463.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
 gi|167621163|ref|ZP_02389794.1| OmpA domain protein [Burkholderia thailandensis Bt4]
 gi|257137752|ref|ZP_05586014.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
 gi|83652579|gb|ABC36642.1| OmpA domain protein [Burkholderia thailandensis E264]
          Length = 311

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 85/281 (30%), Gaps = 18/281 (6%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
               P     + A              +      +     +    +   G      +   
Sbjct: 34  DNVGPATVTPIDAGGVSVKSTPLAAPGAAANGTGTGAIVSSPPPANAAPGQVVAGGKVAD 93

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDLCKSTDLEKSINKEENYFLPPL 178
                  L   + +    N + +              ++ K    +     +    +   
Sbjct: 94  EATKAAVLQRLRDTYGAANVVDQIEVGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGT 153

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +    +  + + Q LA  +++ L+      I  G+    +  G+L   +  R    F+
Sbjct: 154 QIDVKGEVHNEAQRQQLASDMANALNPTYM--IKNGLRVSASEQGLLDQTLANRTIE-FE 210

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+   P+   +L ++   LA        I GHTD          N  LS  RA +   
Sbjct: 211 TGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDN---SGNRASNIALSQSRADAVKG 267

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            L+  G++  +++  +G    +   ++D     + NRRI+ 
Sbjct: 268 YLVTKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRIEF 307


>gi|221196011|ref|ZP_03569058.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221202685|ref|ZP_03575704.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221176619|gb|EEE09047.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221182565|gb|EEE14965.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 484

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +      +++    R   MF    +        ++ KI   +A     
Sbjct: 351 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 407

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           ++I G+TD  P R+     N  LS +RA    Q+L  +GV  +R+  + G         +
Sbjct: 408 VTIVGYTDNVPIRSRQFASNQALSEERATQVMQMLQAAGVQANRLEAV-GKGDADPVGDN 466

Query: 325 DPM--NSANRRIDI 336
                 + NRR++I
Sbjct: 467 RTAQGRAQNRRVEI 480


>gi|146329003|ref|YP_001209240.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
 gi|146232473|gb|ABQ13451.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
          Length = 202

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IR 269
           +    +     +   +        FD   S   PE    +Q++ + L      +    + 
Sbjct: 63  EQAPAQQVEQVLETEVKTFSADTYFDFDKSSLKPEGKAAIQQLAQELNQRGANVRKITVI 122

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           G+TD+   +     N +LS  RA +    L+++GV    I +  G    +   ++D    
Sbjct: 123 GNTDS---KGSDAYNQKLSERRARAVSNYLIENGVPAS-IIEAYGNGERQPVASNDTEAG 178

Query: 328 NSANRRIDILVED 340
            + NRR+DI V+ 
Sbjct: 179 RAQNRRVDIAVDG 191


>gi|126440077|ref|YP_001060632.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126219570|gb|ABN83076.1| ompA family protein [Burkholderia pseudomallei 668]
          Length = 310

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   + G+  +  P           +        S      +T  +        + 
Sbjct: 34  PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSPPPPANATPGQVVAGGKVADE 93

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   Q            ++ +    +T    S N ++          K        +
Sbjct: 94  ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153

Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242
           +    +  +      +A ++   +    T + G+ +S  +Q          T  F+  S+
Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+   +L ++   LA  +     I GHTD          N  LS  RA +    L+ 
Sbjct: 214 TLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            G++  +++  +G    +    +D     + NRRI+ 
Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306


>gi|308273873|emb|CBX30473.1| hypothetical protein N47_K27130 [uncultured Desulfobacterium sp.]
 gi|308275118|emb|CBX31717.1| hypothetical protein N47_E52290 [uncultured Desulfobacterium sp.]
          Length = 355

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 16/182 (8%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K  +  K +   +    PP + E+        R       +   L      N  KG   
Sbjct: 183 PKVEETPKVVEPPKAAEEPPKAVEEPPKAVEPPRTDSDGDGVYDDLDKCP--NTPKGATV 240

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
           +     IL           FD +    L +   +L  +  V+  + ++   ++GHTD+  
Sbjct: 241 DCRGCWIL-------QGVYFDTAKWNILSKYFPILDNVVSVIKKNPDMKLEVQGHTDSR- 292

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
               A+ N +LS +RA S  +  +  GV    I    GF        +D     + NRR+
Sbjct: 293 --GTAKYNRKLSENRAKSVVEYFVSKGVDRS-ILTAKGFGFTVPAAPNDNAEDMAKNRRV 349

Query: 335 DI 336
           ++
Sbjct: 350 EL 351


>gi|291286826|ref|YP_003503642.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290883986|gb|ADD67686.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 368

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 17/212 (8%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 +   +E  K + K    E  + K+E   +     +       + +  D      
Sbjct: 161 GKAPKPMAPKAEPAKTVVKEELAEAKVQKKEAAAVVKKDSDGDGVFDDEDQCPDTPDGYP 220

Query: 201 STLSGLVADNIVKGVLFETTRTGILIS---------IIDQRNTPMFDKSSSIPLPETIVV 251
               G   D    GV     R    I             +     F  +SS      +  
Sbjct: 221 VNAMGCTPDTDGDGVYDFEDRCPNTIKGVKVNSAGCFTARTLDVRFKTNSSEIDESYVDD 280

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
           +    + +  S    I I+GH D+         N  LS  RA S  ++L +  G++E+RI
Sbjct: 281 IILFVKFMKDSPAINIEIQGHADSR---GTDDYNMVLSEKRAKSVAKMLTEKYGIAENRI 337

Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVE 339
             + G+   +    +D       NRRID ++ 
Sbjct: 338 -SVIGYGETKPIAPNDSPENMRKNRRIDTVIR 368


>gi|332996878|gb|EGK16497.1| inner membrane lipoprotein yiaD [Shigella flexneri K-272]
 gi|333013437|gb|EGK32809.1| inner membrane lipoprotein yiaD [Shigella flexneri K-227]
          Length = 219

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|308173338|ref|YP_003920043.1| motility protein MotB [Bacillus amyloliquefaciens DSM 7]
 gi|307606202|emb|CBI42573.1| motility protein B; MotB component of the stator flagellum complex
           [Bacillus amyloliquefaciens DSM 7]
 gi|328911414|gb|AEB63010.1| motility protein B; MotB component of the stator flagellum complex
           [Bacillus amyloliquefaciens LL3]
          Length = 267

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 7/192 (3%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
               +   +++    ++        KE+    +     Q+L          +    +   
Sbjct: 72  PPENEKDGIDQLKKDKDKEKEKEKDKEQKKKEREAADRQELEGVQKQVNQFIKNKKLEHQ 131

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTD 273
           +  + T+ G+LI+I D      FD   ++   E I + ++I  +L  +    I I GHTD
Sbjct: 132 LETKLTKEGLLITIKDS---IFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTD 188

Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
             P +N     NW LS+ RA +   +L ++   + ++    GF  ++   ++        
Sbjct: 189 NVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSK 248

Query: 331 NRRIDILVEDRQ 342
           NRR+++L++ R 
Sbjct: 249 NRRVEVLIQPRN 260


>gi|283787805|ref|YP_003367670.1| outer membrane protein [Citrobacter rodentium ICC168]
 gi|282951259|emb|CBG90953.1| putative outer membrane protein [Citrobacter rodentium ICC168]
          Length = 220

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGQDLNMRLSQQRADSVASALITQGVEAGRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|163744900|ref|ZP_02152260.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
 gi|161381718|gb|EDQ06127.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
          Length = 221

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V+   T   +++++       +F   S+   P     L  + + +    
Sbjct: 86  EAELRAAMDSRVVITNTGDRLIVTLPQD---ILFATDSTSVAPGLRDDLAALAQNVNIYQ 142

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                + GHTD+      A  N +LS  RA +   +L+ +GV + R+    G    +   
Sbjct: 143 NSTLQVVGHTDSD---GEAAYNQQLSERRAQAVGNILLSNGVPQQRLQTF-GRGESQPVA 198

Query: 323 ASDPMNSA--NRRIDILVE 339
           ++        NRR++I++ 
Sbjct: 199 SNLSAAGKSQNRRVEIVIL 217


>gi|295095145|emb|CBK84235.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 220

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMKGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAA 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV  +RI + SG  
Sbjct: 137 VLKEYNKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASSLIAQGVEANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|303236640|ref|ZP_07323221.1| OmpA family protein [Prevotella disiens FB035-09AN]
 gi|302483144|gb|EFL46158.1| OmpA family protein [Prevotella disiens FB035-09AN]
          Length = 286

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 14/215 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q    K S             +T+       +    +   ++     ++ K +   L 
Sbjct: 58  EDQLAQAKASAQALQGSLDKSLSNTNSTNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +S+ L+  ++   +K V  +  +  + IS+ D     ++   S          L KI 
Sbjct: 118 LVLSNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEISDRAEETLSKIA 174

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           +++   ++    I G+TD  P    +       +NW LS  RA S  Q L    GV   R
Sbjct: 175 KIITDYSDYDVLIEGNTDNVPVNAQSERMKNIRNNWDLSCLRASSVVQYLQTRFGVDPKR 234

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           ++   G   +     +D       NRR  I++  +
Sbjct: 235 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 268


>gi|283835926|ref|ZP_06355667.1| OmpA family protein [Citrobacter youngae ATCC 29220]
 gi|291068103|gb|EFE06212.1| OmpA family protein [Citrobacter youngae ATCC 29220]
          Length = 220

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMQGTGVSVTRSGDNIILNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G TD++        N RLS  RA S    L+  GV+ +RI +  G  
Sbjct: 137 VLKEYDKTAVNVLGFTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTQGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|332977323|gb|EGK14111.1| OmpA/MotB family protein [Psychrobacter sp. 1501(2011)]
          Length = 552

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 7/175 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I+  +   L  L  +   A      +      + + +   +A+                +
Sbjct: 332 IDAPDQAQLDKLVADIKAAAPELNVIAAGPLDLDAEIKQSIANATTAMDNLGENPDPKDV 391

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           +         F+   +        VL +  EV+ +   +   I GHTD+         N 
Sbjct: 392 ARALSLQVINFEVDKADIPEVNKAVLDRAVEVMKNVPNMQLMILGHTDSD---GDDAHNQ 448

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
            LS  RA S  Q L+  GV   ++    G         +   N    NRRI+  V
Sbjct: 449 ELSQRRAESVKQYLVSKGVDASKLMT-KGMGETDPIATNQTDNGKFRNRRIEFTV 502


>gi|312884285|ref|ZP_07743994.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368058|gb|EFP95601.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 125

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +  F+  S          L  +   L       ++I G+TD+      A  N +LS
Sbjct: 13  EEYGSGTFEFDSCKLTQSVAERLDNLANFLNEYPTSRVAITGYTDS---SGPAAYNLKLS 69

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
             RA +    L+ +G+ E R++  +G   +     +        NRR+++++
Sbjct: 70  EMRAQAVKDYLISAGIEEARLTA-TGLGENNPVADNCTHEGREKNRRVEVVI 120


>gi|157889021|dbj|BAF80966.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G++L  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321


>gi|255534563|ref|YP_003094934.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
           3519-10]
 gi|255340759|gb|ACU06872.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
           3519-10]
          Length = 300

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +    +   L   +S+ L   + +     V  +  +  ++IS+ D+    ++     
Sbjct: 125 QQLISTNAKNDSLNLALSNKLKRSLDNIADDDVQVKVLKGVVMISLSDKM---LYKTGDY 181

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
             +P    VL K+ +V+         I G+TD  P  +    +DNW LS  RA S  ++L
Sbjct: 182 NVMPAAQEVLGKVAQVINDYDTYSVLIEGNTDNVPLSSANLPKDNWDLSALRATSMAKIL 241

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               GV+  RI+   G + +  K  +      + NRR +I++  +
Sbjct: 242 QTKFGVNPARITAG-GRSEYNPKTTNASVSGRAENRRTEIIIMPK 285


>gi|49081952|gb|AAT50376.1| PA0833 [synthetic construct]
          Length = 238

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I I G+TD++      + N  LS  RA S    L   GV   R+S   G    
Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226


>gi|116619472|ref|YP_821628.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222634|gb|ABJ81343.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 267

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           S     L +     K     +       +         +    DLAK + +   GL ++ 
Sbjct: 62  SAISTVLGRGKHEAKKAPLSQQTTEERENPTAPPPRPAETHPPDLAKSLDTLQKGLDSEL 121

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +       G++IS+   R    F        P ++ +L KI  V+      + + G
Sbjct: 122 KNGKLQLRLDPRGLIISM---REATFFASGDDAVAPGSLPILTKIAAVVQSLPNPVRLEG 178

Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
           HTD+ P   +  R NW LS  R+ +  ++L     +   R+  ++G+A +     ++   
Sbjct: 179 HTDSRPIHTSRFRSNWELSAARSIAMLELLRDRFQIPASRM-AVAGYAENAPADTNETEE 237

Query: 329 SA--NRRIDILVED 340
               NRR+D+++  
Sbjct: 238 GRAHNRRVDLVLLS 251



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P N   W + YADF+T+L AFF+VM+    +D +  +A+        ++   +S
Sbjct: 3   RKKAPEPENHERWLVSYADFITLLFAFFVVMFASTQSDKNKARAVSDSVREALEHGQFSS 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                       + +  +     E     +      +        +  + +    +S+  
Sbjct: 63  AISTVLGRGKHEAKKAPLSQQTTEERENPTAPPPRPAETHPPDLAKSLDTLQKGLDSELK 122

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                           + ++T      +      LP L+K   +  
Sbjct: 123 NGKLQLRLDPRGLIISMREATFFASGDDAVAPGSLPILTKIAAVVQ 168


>gi|330722438|gb|EGH00277.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC2047]
          Length = 130

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L +    IS+ GHTD+ P      R NW LS  RA S    L K GV       ++GFA 
Sbjct: 8   LKNVEGKISVEGHTDSVPIATSVFRSNWDLSSARALSVAHELFKGGVLNSNRFMVTGFAD 67

Query: 318 HRLKIASD--PMNSANRRIDILVED 340
            +  +A+D     + NRR++I++  
Sbjct: 68  AKPLVANDNAANRAKNRRVEIIIHQ 92


>gi|153003419|ref|YP_001377744.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152026992|gb|ABS24760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 205

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +++ +N  +FD +S+    E +  L ++G++LA    + I I GHTD+         N  
Sbjct: 90  LVNMKNDILFDTNSADLKGEAVTQLTQVGDILAKYADDRIRIEGHTDS---SGSDSLNEA 146

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA S   VL+  GV E++I  + G    +    +      + NRR+++ ++   
Sbjct: 147 LSRKRADSVRTVLVSRGVREEQI-TVVGNGETKPIADNATKEGRAKNRRVELHIDVPN 203


>gi|78189221|ref|YP_379559.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Chlorobium chlorochromatii CaD3]
 gi|78171420|gb|ABB28516.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Chlorobium chlorochromatii
           CaD3]
          Length = 422

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   PE++  +  + +++    E   S+ GHTD+        +N  LS  RA + 
Sbjct: 321 FDINKATIKPESMGTINYVVKMMQEHPELKFSVEGHTDSD---GADANNQTLSEARAQAI 377

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L++SG++++R++   G+   +    ++     + NRR++ +
Sbjct: 378 VNKLIESGIAKERLTS-KGWGESKPITNNETAEGKAQNRRVEFI 420


>gi|239908944|ref|YP_002955686.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798811|dbj|BAH77800.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
          Length = 345

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 8/143 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             I      L  +   +  L       I   I+    +  FD       PE + VL++  
Sbjct: 203 NCIELGEELLRNEAAREKFLECALYEWIEDEIV-VFRSIYFDFDKYNIKPEFVPVLEEGT 261

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            ++   T +  I  GHTD+       + N +L   RA S     +K G+   RI  IS F
Sbjct: 262 AIIKSKTGMKVILEGHTDSI---GTEQYNMKLGQRRADSVKAFFVKKGIDASRIETIS-F 317

Query: 316 AHHRLKIASDPM--NSANRRIDI 336
                   +      + NRR  I
Sbjct: 318 GESDPVATNKTAQGRALNRRCVI 340


>gi|242280858|ref|YP_002992987.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242123752|gb|ACS81448.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 250

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           + K KK +  L   I + +S    + +   +   T + G+L+ +       +F   ++  
Sbjct: 93  SAKAKKDMHALEVDIRAFISAGKMEKL---MAVNTDQQGVLVRV---PTRAIFKPGTAQI 146

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV-LMKS 302
            P+  V+L K+  ++      + +RGHTD    +N     NW LS  RA S  +  L KS
Sbjct: 147 NPKATVLLDKVASIMKKKDFNLVVRGHTDDRATKNNIYSSNWELSAARAASCLRYILKKS 206

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           GVS  R+  + G+A  +  + +      + NRR++  
Sbjct: 207 GVSSKRLKAV-GYAGTKPLVPNTSNRNRAINRRVEFY 242


>gi|163858178|ref|YP_001632476.1| hypothetical protein Bpet3863 [Bordetella petrii DSM 12804]
 gi|163261906|emb|CAP44208.1| OmpA-family protein [Bordetella petrii]
          Length = 215

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 20/170 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++       ++   L+G +A            R  ++   I    + +
Sbjct: 43  ELSARLESEVKQRQEETQRRIELEQALAGPLAAG----------RVTLVDGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     +   L    EV+ + G TD  P         DNW LS 
Sbjct: 93  FALNSDELQPEGEEVLKSLVGPLSAYLQARDEVLMVSGFTDNQPVHGNNRRFADNWDLSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            RA +  + L++ G++   +   + F   +   ++D       NRR++I+
Sbjct: 153 QRALTVTRALIEQGIAPASVFAAA-FGAEQPVASNDSAEGRASNRRVEIV 201


>gi|107023374|ref|YP_621701.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116690456|ref|YP_836079.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|170733777|ref|YP_001765724.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|254247501|ref|ZP_04940822.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
 gi|105893563|gb|ABF76728.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116648545|gb|ABK09186.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|124872277|gb|EAY63993.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
 gi|169817019|gb|ACA91602.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 215

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  SI G+TD++      + N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSQQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVNGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|228917149|ref|ZP_04080707.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929558|ref|ZP_04092577.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935820|ref|ZP_04098632.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948234|ref|ZP_04110518.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229093607|ref|ZP_04224708.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
 gi|229124075|ref|ZP_04253267.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
 gi|228659377|gb|EEL15025.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
 gi|228689816|gb|EEL43622.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
 gi|228811592|gb|EEM57929.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823877|gb|EEM69697.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830137|gb|EEM75755.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842567|gb|EEM87657.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 234

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|293412987|ref|ZP_06655655.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468634|gb|EFF11127.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 219

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDAGRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|254282997|ref|ZP_04957965.1| outer membrane fibronectin-binding protein [gamma proteobacterium
           NOR51-B]
 gi|219679200|gb|EED35549.1| outer membrane fibronectin-binding protein [gamma proteobacterium
           NOR51-B]
          Length = 227

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    +   VL    E +         + GH D+         N  LS  RA + 
Sbjct: 125 FAFDSAELPADAASVLADAVEFVDAMGGKKLIVSGHADS---SGPDAYNQSLSQRRADAV 181

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              L++SG+ E ++  + G+        +      + NRR++I
Sbjct: 182 KAFLVESGIPERQLEAV-GYGETMPVADNATASGRAQNRRVEI 223


>gi|261417399|ref|YP_003251082.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373855|gb|ACX76600.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327366|gb|ADL26567.1| putative chemotaxis MotB protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 216

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 11/172 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIID 230
                  +++     +     Q+  +KI++  + L++ ++   +           I I  
Sbjct: 34  ATLKEQKAEDLTRTEEEVLSCQEQMRKIAAERNALLSKSLQTSIEAGLIALEDGKIQIQA 93

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARD-NWR 286
                +F  + +    E   V++ I + L     ST+VI + G TD  PF       NW 
Sbjct: 94  S---FLFPINGANLTKEGEGVIRGISKGLLEALDSTDVIMVSGFTDDIPFSGSTSYTNWN 150

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           LS +RA +  ++L+K G   DR+    GF  HR K  +D       NRR++I
Sbjct: 151 LSTERAVNVVKMLVKMGFPPDRLFAA-GFGEHRPKYPNDSEEHRRLNRRVEI 201


>gi|110834272|ref|YP_693131.1| OmpA family protein [Alcanivorax borkumensis SK2]
 gi|110647383|emb|CAL16859.1| OmpA family protein [Alcanivorax borkumensis SK2]
          Length = 221

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISS 201
             +  + + K         +  ++            KE+ LA      +    +   +  
Sbjct: 24  PYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERKERALAGAGIGAVTGGGVGYYMDV 83

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L       GV        I++++        F   S+   P    VL+ + EVL  
Sbjct: 84  QEAKLRQKLEGAGVSVTRDGENIILNM---PGNLTFATDSTDVKPSFDPVLEAVAEVLKE 140

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
               +I + GHTD++      R N  LS  RA +    L   GV + R+  + GF   + 
Sbjct: 141 YKSTMIQVAGHTDST---GGDRYNLLLSQQRAQAVSNKLSAFGVEQVRLDPV-GFGETQP 196

Query: 321 KIASDPMNSA--NRRIDILVE 339
             ++   +    NRR+++ + 
Sbjct: 197 IASNSSASGREQNRRVELTLL 217


>gi|310778794|ref|YP_003967127.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748117|gb|ADO82779.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
          Length = 208

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 11/216 (5%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
              I  +  +  +    +S   ++     + K+ +  +  N      +       + A  
Sbjct: 1   MKKIVVMLAALAALSGCSSADEETAMLNKMEKNLNKIEENNATTGSMIDQYKTRILDAKT 60

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               L+     I S ++          ++        LI   D     +FD + S    +
Sbjct: 61  NVANLEKDINAIDSFINPETVFEKNGVIVKRERDQLTLIMPTD----VVFDFNKSEIKED 116

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L  + E L       + I GHTD          N +LS  RA SA + L+  G++ 
Sbjct: 117 FKPLLDSLYEALTIYKGLSVKIDGHTDNI---GSYDYNLKLSQKRAESAKEYLVSKGLNA 173

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            RI    G +      ++        NRRI+++++ 
Sbjct: 174 GRIIT-EGHSFSTPAASNATQAGRDKNRRIEVVIKK 208


>gi|282877998|ref|ZP_06286806.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281299833|gb|EFA92194.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 288

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 14/165 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++   S     
Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEIND 165

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVL 299
                L KI +++    +    + G+TD  P    +      R+NW LS  RA S  Q L
Sbjct: 166 RAAETLSKIAKIIMDYKDYDVLVEGNTDNVPVNQNSPLMKNIRNNWDLSTLRASSVVQFL 225

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
               GV   R++   G   +    +++       NRR  I++  +
Sbjct: 226 QSHYGVDPKRMTAG-GRGEYNPLTSNNTELGKQRNRRTQIIITPK 269


>gi|91217489|ref|ZP_01254448.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
 gi|91184374|gb|EAS70758.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
          Length = 280

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 9/148 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           + ++L G + +   + +     +  + +SI D+    +F         E   VL K+  V
Sbjct: 121 LVTSLKGALGNINDEDIQINVEKGVVFVSISDKL---LFGAGQFKVTAEAKRVLGKVATV 177

Query: 259 LAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315
           +    +    + GHTD  P  R    DNW LS  RA +  ++L  +  V   R++   G 
Sbjct: 178 VNDKKDFEFMVEGHTDNDPISRTNIEDNWDLSTKRATAVVRILQDEYDVDPKRMTAA-GR 236

Query: 316 AHHRLKIASDPMNS--ANRRIDILVEDR 341
             +     +D       NRR  I++  +
Sbjct: 237 GEYIPVANNDTEAGQSKNRRTRIVILPK 264


>gi|51246518|ref|YP_066402.1| flagellar motor protein (MotB) [Desulfotalea psychrophila LSv54]
 gi|50877555|emb|CAG37395.1| related to flagellar motor protein (MotB) [Desulfotalea
           psychrophila LSv54]
          Length = 249

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + +  K      + L A  I   V        I+I  +D +   +F +  S   P + ++
Sbjct: 90  IDNTKKIHEKIKNKLKALRINSEVELINKDKDIIILRMDDK--VLFARGQSEISPRSYML 147

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRIS 310
           L+ I +++      + I GH+D  P       NW LS  RA SA +   +   +S DR+S
Sbjct: 148 LRNIADIIRPLPVNVRIEGHSDDIPLGINNIANWNLSTSRAVSALRFFYRGNLISLDRLS 207

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVE 339
            I G+        +      + NRR+D ++ 
Sbjct: 208 AI-GYGDMHPIAPNTTEENRAKNRRVDFVLR 237


>gi|85713659|ref|ZP_01044649.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85699563|gb|EAQ37430.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 463

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +   P++I +L ++ E  L   T  I I GHTD       A  N  LS  RA + 
Sbjct: 361 FETGKATLDPDSIGLLDQLTETALRCPTATIEIVGHTDGD---GDASFNQALSERRAQAV 417

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
              ++K+G+  +R   I G+   +    +D     + NRRID +V  
Sbjct: 418 VDFMVKAGLPANRFRPI-GYGSAQPIATNDTDEGKAKNRRIDFIVRQ 463


>gi|312892404|ref|ZP_07751899.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311295188|gb|EFQ72362.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 452

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS+    +  +L      L    + I++ G+  +      A  N +LS DRA S  
Sbjct: 353 FEFDSSVLRTSSYPILDATSADLRTGKKSITVNGYASSE---GTAAHNLQLSKDRANSVK 409

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             L+ SGV   RI  + G         +   +    NRR++ 
Sbjct: 410 TYLVNSGVDAKRIK-VKGLGETHPIADNSTEDGRVLNRRVEF 450


>gi|284035678|ref|YP_003385608.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
           74]
 gi|283814971|gb|ADB36809.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
           74]
          Length = 890

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             +   F+   +   PE+ V L  + ++L       + + G+TD +     A  N +LS 
Sbjct: 781 DFDRLTFETGKATLKPESQVQLGNVAQILKAYPNVNVKVGGYTDNT---GNANANLKLSG 837

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +RA S    L K G+ + R+    G+       ++D     + NRRI + V  +
Sbjct: 838 ERASSVEAELEKLGIDKSRLEA-EGYGQEHPVASNDTEEGRAQNRRISMRVTKK 890


>gi|119476926|ref|ZP_01617207.1| ompA family protein [marine gamma proteobacterium HTCC2143]
 gi|119449733|gb|EAW30970.1| ompA family protein [marine gamma proteobacterium HTCC2143]
          Length = 213

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    S L       GV        I + +     +  F+  S +       VL+ +G 
Sbjct: 73  YMDVQESALREQLQGSGVRVVREGDNIRLIM---PGSITFETDSYVLRRSFSPVLESVGL 129

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VLA   E ++ + GHTD +      + N RLS DRA S    LM  GV  +R+  I G  
Sbjct: 130 VLAKYNETMMRVTGHTDNT---GGEQYNQRLSEDRAQSVASNLMSQGVDGNRLY-IQGSG 185

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342
                  ++     ++NRR+++ +    
Sbjct: 186 ETMPIADNNTSSGRASNRRVELYILPNN 213


>gi|241663267|ref|YP_002981627.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
 gi|240865294|gb|ACS62955.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
          Length = 431

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 11/273 (4%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +  +  + I      P+R      + + +      +V    G   +            
Sbjct: 153 LVHQWSPVEVIPSAATTPQRRHVTIANSAAEHQRIHVAVSNPSGGAVEPSDVLITVGMPV 212

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             +   Q    + S                L     ++        S+   L  +  KR 
Sbjct: 213 QEAAPSQELSPQRSWRLIVIAVVVTALVIGLAWVTYRQHLDNQALASQVSALEAQVAKRQ 272

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L  +I+  L+            F  +  G  I I+       F   S+   P     L
Sbjct: 273 EPLEDRIARALTSET-----GASQFGLSTEGDRIYIVFSSGMG-FAAGSADITPMLARQL 326

Query: 253 QKIGEVLAHSTEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           +++  VL  +   ++I GHTD SP  R     N  LS  RA +  + L   G+SE R+S 
Sbjct: 327 ERLAGVL-TTDGKVTIVGHTDDSPGARGRTETNLALSAARAMAVGRNLQAHGLSETRLST 385

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           + G         +        NRR++I+++ ++
Sbjct: 386 M-GRGAKEPVGDNKTAEGRALNRRVEIVLDRQR 417


>gi|57505781|ref|ZP_00371707.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
 gi|57016054|gb|EAL52842.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
          Length = 316

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +   P     +Q I +VL  + +  +I  GHTD +        N +LS  RA   
Sbjct: 212 FEFDKTTINPAFESRIQNIAKVLEENEKYNTILEGHTDNT---GSRAYNQKLSERRAQRV 268

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              LMK GV + RI ++ G+   + + +++       NRR++
Sbjct: 269 ANELMKFGVDKKRI-EVKGYGQDKPRSSNETKEGRADNRRVE 309


>gi|222054259|ref|YP_002536621.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221563548|gb|ACM19520.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 242

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                   +           + +++    +  +FD             L K    L  S 
Sbjct: 99  QAAALKKNLPEAEVVRDGDKVYVAL---PSGILFDLGKDALKSGAKESLSKAAATLKASE 155

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I ++GHTD++        N  LS  RA      L  +GV   R++ + G+   R  +A
Sbjct: 156 TNIVVQGHTDST---GSDAINQPLSERRAKQVRDFLTANGVPAFRLTAV-GYGSSRPAVA 211

Query: 324 SDP--MNSANRRIDILVEDRQ 342
           +D     + NRR+ + +   +
Sbjct: 212 NDTDANRALNRRVQLEISPNE 232


>gi|70728526|ref|YP_258275.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68342825|gb|AAY90431.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 262

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 11/238 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
               +  + +        +       ++  +  +        D        +    + + 
Sbjct: 21  STPPNANLENARTNFSALQANPQASKVAALETKDAADWMDKADKAYLNKDDEKKVDQLAY 80

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +   +   +     A  + K   D   +            +   +  + T  G L++
Sbjct: 81  LTNQRVEVAKETIALRTAEAKLKDAGDQRARAILDARDAQIKQLQDSLNAKQTDRGTLVT 140

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
             D     +F  + S      +V + K+ + L  + +    + G+TD++        N  
Sbjct: 141 FGD----VLFATNKSDLKSSGLVNINKLAQFLQQNPDRKVIVEGYTDST---GSDSYNQS 193

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           LS  RA S    L++ G+   RI    G+        +      + NRR+++ + +  
Sbjct: 194 LSERRAGSVQMALIRMGIDPARIVS-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250


>gi|262395314|ref|YP_003287167.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
 gi|262338908|gb|ACY52702.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
          Length = 430

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 10/162 (6%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             ++       + +   ++++IS  L+  +   +   +  E  +  + IS+  Q    +F
Sbjct: 270 QPQQLNQDTTSESKSAPISERISMYLATEIGKGL---INVEPLQDRVRISLKSQD---LF 323

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAY 296
           +  S+  +     V+ K+   L  +   I + GHTD  P   +    NW LSL RA +  
Sbjct: 324 ESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMS 383

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           + L+ +   E R+    G    R  + +  D   + NRRI+I
Sbjct: 384 EQLISNSTLEGRVIP-EGLGDARPLVENNSDENRAINRRIEI 424


>gi|167835831|ref|ZP_02462714.1| ompA family protein [Burkholderia thailandensis MSMB43]
          Length = 215

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATNQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAYNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L +  V+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALSQRSVAASRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|153870010|ref|ZP_01999498.1| OmpA/MotB [Beggiatoa sp. PS]
 gi|152073520|gb|EDN70498.1| OmpA/MotB [Beggiatoa sp. PS]
          Length = 296

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 9/278 (3%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +              +  + D Q  P R+S+ +  +            LK       +  
Sbjct: 19  LSTAVITVQAAGDRDTYHLLDSQGQPVRTSRPEECVETPNTANTPIQLLKECGDVSDRDG 78

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
             + ++     ++   E  K        KG  L    D       +  Y  P    + + 
Sbjct: 79  DGIFDDEDVCPDNTPEELVKGVHQSGPRKGCSLDSDNDSVPDYRSDCPYNTPLEISKGVD 138

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +      L      +               V          +     +    F    +  
Sbjct: 139 SRGCP--LDSDQDGVPDYKDLCPGTPFGIAVDENGCALSGPVVTRTLQGDVTFAFDKAAL 196

Query: 245 LPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+    L+ +         + I + GHTD+         N +LS  RA S  + L    
Sbjct: 197 TPQAKTTLEGLINEFGLDFIKGIEVIGHTDSI---GKDSYNQKLSEQRAASVVRYLQVLN 253

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           V+  +I+   G         +D     + NRR++I +E
Sbjct: 254 VNTSKINGW-GEGERNPVAPNDTREGRAQNRRVEIKIE 290


>gi|15595276|ref|NP_248768.1| hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
 gi|116054405|ref|YP_788234.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254243187|ref|ZP_04936509.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
 gi|296386560|ref|ZP_06876059.1| hypothetical protein PaerPAb_00450 [Pseudomonas aeruginosa PAb1]
 gi|9945903|gb|AAG03468.1|AE004447_1 hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
 gi|115589626|gb|ABJ15641.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126196565|gb|EAZ60628.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
          Length = 449

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F  +S+    E   +L +I + L      
Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW+LS  RA     +L  +     R +   G +       +
Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVATN 427

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I V
Sbjct: 428 ASAEGRARNRRVEITV 443


>gi|304398041|ref|ZP_07379916.1| OmpA/MotB domain protein [Pantoea sp. aB]
 gi|304354327|gb|EFM18699.1| OmpA/MotB domain protein [Pantoea sp. aB]
          Length = 219

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRNGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVSM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ DR+ +  G  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSRALNMRLSQQRAESVASALIVQGVASDRL-RTQGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PDNPVATNSTEAGKAQNRRVEITL 216


>gi|300024878|ref|YP_003757489.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526699|gb|ADJ25168.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 387

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 14/280 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK--QYQR 126
           FNP      + +    D+      S       +      +++     G T          
Sbjct: 109 FNPDYAANSSDAPAASDDAAEAAPSGSETSGEAAATQTAEDTSPPPTGGTATTDYYGGSP 168

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              N  + + ++ +    +     +E  +          +   EE+   PP   +     
Sbjct: 169 SPQNPAWAAPAKMNPDYSSEPAAPAETAQPAATEAPAAAASPAEEDAAPPPTGGKATTDY 228

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR-----TGILISIIDQRNTPMFDKSS 241
                  +              +        E            ++   +  T  F++ S
Sbjct: 229 YGGSAAPNNPAWAEPAKMNPDYNAATAPAASEAAAPSGEACRETVATNAKAATLRFNEDS 288

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P +   L  +   L     V+  +RG TD+      +  N  LS  RA      L 
Sbjct: 289 AAIAPASRTALSALVTALKACAGVVVEVRGFTDSV---GSSEGNQMLSELRAKKIVDFLT 345

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           K+GV   +++ + G         ++       NRR++ ++
Sbjct: 346 KAGVEASKLTAV-GKGEDDPVADNETPEGRRLNRRVEFVL 384


>gi|218893200|ref|YP_002442069.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
 gi|218773428|emb|CAW29240.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
          Length = 237

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I I G+TD++      + N  LS  RA S    L   GV   R+S   G    
Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTALGVDGTRLST-RGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ +    G
Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226


>gi|170703075|ref|ZP_02893898.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170132016|gb|EDT00521.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 215

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +   S+ G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTASVVGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|296100590|ref|YP_003610736.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055049|gb|ADF59787.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 220

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMKGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV  +RI + SG  
Sbjct: 137 VLKEYNKTAVNVIGYTDST---GSQELNMRLSQQRADSVASSLITQGVEANRI-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|255622212|ref|XP_002540262.1| conserved hypothetical protein [Ricinus communis]
 gi|223497476|gb|EEF22121.1| conserved hypothetical protein [Ricinus communis]
          Length = 160

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +F  +S+I LPE+   L  + +V+         I GHTD     +  + N  LS  RA
Sbjct: 49  RILFQANSAIILPESYADLDIVYDVVKEWGNDKVEIAGHTDKRN-TSKEKYNLVLSEKRA 107

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +    L+K G+   R+  + G+   +    +DP   N ANRR++++
Sbjct: 108 KAVADYLVKKGMDAQRLV-VKGYGFSQPIAENDPVSGNDANRRVEVI 153


>gi|162449977|ref|YP_001612344.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161160559|emb|CAN91864.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 274

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 18/218 (8%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +   Q++  K+ L   + + + L              N  L   ++      +R ++L+D
Sbjct: 48  AEQAQNKKAKSELDEAAARIEQLKSQLKAAGVDISNLNANLEQQARALEDFRRRAQQLED 107

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           + K+    L   +      G+        ++I +       +FD        E   +L K
Sbjct: 108 IKKRFE-VLRDKLQALTKLGLSVTVRNNRMVIQL---PGDVLFDSGRETLKKEGQEILLK 163

Query: 255 IGEVLAHSTE----VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMK------SG 303
           + EV+ + +        + GHTD +P      +DNW LS+ RA      L++       G
Sbjct: 164 VAEVIRNDSGLSARSFQVAGHTDNAPLAGGRFKDNWGLSVMRAREVLAFLLQPEDKGGGG 223

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    SG+        +D      ANRR +++V 
Sbjct: 224 LKPER-WSASGYGDTDPVKPNDTPENKQANRRCELVVL 260


>gi|149372159|ref|ZP_01891429.1| putative flagellar motor protein MotB [unidentified eubacterium
           SCB49]
 gi|149354926|gb|EDM43488.1| putative flagellar motor protein MotB [unidentified eubacterium
           SCB49]
          Length = 287

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 78/244 (31%), Gaps = 11/244 (4%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              +   +  + +   K      E +   +      +   +    + +  +     T L 
Sbjct: 28  QTKQKETEDLLNTATVKLNSCLTEKSAAIVKAEGLEDRLNDLKASNQQLIESSKDLTILT 87

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222
                     L  L +  +   + +  L        + +S L  +     + +     + 
Sbjct: 88  SKGADNLEKSLESLKERDLKITRLQDALSKKDSVTLALVSSLKKEVGMNDQDIQINVEKG 147

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            + IS+ D+    +F   S         +L K+  V+    +    + GHTD  P+    
Sbjct: 148 VVFISLSDK---VLFKSGSYNLSTRANEILGKVATVINGKPDFEALVEGHTDNVPYNGGG 204

Query: 282 R--DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              DN  LS  RA +  + L+  G +  ++    G       + +  + +   NRR  I 
Sbjct: 205 VLIDNLDLSAKRATAVVRQLISLGANPSQLIAA-GRGEFVPLVPNTSVENKTLNRRTKIY 263

Query: 338 VEDR 341
           +  +
Sbjct: 264 ILPK 267


>gi|282880441|ref|ZP_06289148.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305544|gb|EFA97597.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 298

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   +++ L+  ++   +K V  +  +  + IS+ D     ++  +S     
Sbjct: 121 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKTASYEIND 177

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVL 299
                L KI +++    E    + G+TD  P    +      R+NW LS  RA S  Q L
Sbjct: 178 RAAETLSKIAKIIMDYKEYDVLVEGNTDNVPVNPNSPLMKNIRNNWDLSTLRASSVVQYL 237

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            K+ GV   R++   G   +    +++       NRR  I++  +
Sbjct: 238 QKNYGVDPKRMTAG-GRGEYNPLTSNNTELGRQRNRRTQIIITPK 281


>gi|152982971|ref|YP_001354367.1| outer membrane protein A precursor [Janthinobacterium sp.
           Marseille]
 gi|151283048|gb|ABR91458.1| outer membrane protein A precursor [Janthinobacterium sp.
           Marseille]
          Length = 206

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  PE    L  +   L      + I  GHTD+         N +LS+ RA +    L+ 
Sbjct: 107 VLKPEGKAKLDDLTSKLNGLNLEVIIAVGHTDSV---GSDAYNQKLSVRRAEAVKAYLVG 163

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            GV   R+    G    +    +      + NRR++I V   +
Sbjct: 164 KGVDAKRVYT-EGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 205


>gi|154508489|ref|ZP_02044131.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798123|gb|EDN80543.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
           17982]
          Length = 403

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 26/301 (8%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           +   +        A+         N  T S  I +               S  + +   +
Sbjct: 113 LVSGSTVLGGDGSAVSSSDKGTVVNDGTGSGVITEGPISIIYGGDGSGTYSNADTMVTIT 172

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           V+     T        + +     + S  +         D          T +       
Sbjct: 173 VEADGSGTYSTTTTSIILDGNGGGNYSNATSMESIINNGDGSGQFSKGTVTIINNG---- 228

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF----ETTRTGILI 226
            +       ++  +              I+          + K             G +I
Sbjct: 229 -DGTGSYSDEKLTIQNNGNGTATVNGVTINDAPKVEKVGKLGKFPAVESLKPVESCGTVI 287

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNW 285
           ++ D     +FD   S   PE    L+ +  VL +       I GHTD+    +    N 
Sbjct: 288 TLED---GVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSI---SDEAFNL 341

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDIL 337
           +LS +RA +    L K GVS   I   +G+   +    ++           + NRR++I 
Sbjct: 342 QLSQERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIF 399

Query: 338 V 338
           +
Sbjct: 400 I 400


>gi|221069812|ref|ZP_03545917.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
 gi|220714835|gb|EED70203.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
          Length = 219

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   +        +L +  E L ++    + I GHTD++        N  LS
Sbjct: 106 DIPSDISFDTGRADIKSNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 162

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           L RA S    L   GV+  RI ++ G   H+   ++      + NRR++I V +R
Sbjct: 163 LQRAESTRNYLTSRGVNGARI-QVQGMGSHQPVASNATNEGRARNRRVEIFVGER 216


>gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 459

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE    +  +G  +       ++  GHTD          N  LS  RA S 
Sbjct: 228 FDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEGHTDNV---GNPEYNLDLSKRRAQSV 284

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+ + G+   R+    GF   R   A+        NRRI+ +++
Sbjct: 285 VDYLVDNYGIERSRLEA-RGFGMARPIAANSTDEGRQANRRIEAIID 330



 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 86/235 (36%), Gaps = 12/235 (5%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           L+      K + +    +      +   ++   +   +           +L+ S  + ++
Sbjct: 224 LQGEFDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEGHTDNVGNPEYNLDLSKRRAQS 283

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQ 231
                +    I   + + R   +A+ I++  +        +          +  +   D+
Sbjct: 284 VVDYLVDNYGIERSRLEARGFGMARPIAANSTDEGRQANRRIEAIIDCAFDVKEVQPPDR 343

Query: 232 RNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
               +   FD   +   P     + K+GE +       ++  GHTD       +  N +L
Sbjct: 344 LCMTLLLEFDSGKADIKPLYRGEMAKVGEYMNKYPTTTAVIEGHTDNV---GGSDYNMKL 400

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           S  RA +A Q L+++ G+ + R+S   G+ + R    +      + NRRI+ +++
Sbjct: 401 SQQRAENAVQYLVQNFGIDKSRLSA-KGYGYTRRIAYNSTPEGRAKNRRINAVID 454


>gi|157889001|dbj|BAF80950.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        PE    +Q++G+VL  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKVYNQKLSLERAKAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L KSGV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|154247748|ref|YP_001418706.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
           Py2]
 gi|154161833|gb|ABS69049.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
          Length = 729

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 79/279 (28%), Gaps = 15/279 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                      S    D Q P        +    DE                +   +R  
Sbjct: 458 MQAVKAPPAGVSVVTDDLQPPAISPYVFSVRREGDELTVSGFYPDAAAHAAIRAALERDF 517

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                   S                G      T   +    +    L   +     A + 
Sbjct: 518 LREKVNDVSAVGGGAPAGFLPAVLSGLTQLSRTGTGEISIVDGQLRLTGTALTSAAASEM 577

Query: 189 KKRLQDLAK---KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              L+   +    + + +   VA               +L      R T  F   S+   
Sbjct: 578 DAELKRAVRPPFMVETAIDAAVAPPPADTPTCGRQVGELL-----ARGTIRFASGSAEID 632

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +  ++ ++   L      ++ I GHTD       A  N RLS  RA +    L+ +GV
Sbjct: 633 RHSRGLIDRLAVALKRCPTAMVRILGHTDGV---GDAEFNKRLSEARANAVLAYLVTAGV 689

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           + DR+S   GF   +    +D       NRRI+  V++R
Sbjct: 690 TADRLSAA-GFGAGQPLAPNDTEAGKALNRRIEFEVKER 727


>gi|209965863|ref|YP_002298778.1| outer membrane protein OmpA (probable proton motor MotY)
           [Rhodospirillum centenum SW]
 gi|209959329|gb|ACI99965.1| outer membrane protein OmpA (probable proton motor MotY)
           [Rhodospirillum centenum SW]
          Length = 281

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 23/244 (9%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
               +  Q L +       +Q     + +          L  + + E             
Sbjct: 34  PPLARVQQELADARTENVAAQAPVAFQEAERSVQRAQSRLGSAGEAEMEHLTYLAEVRLQ 93

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----- 232
            ++ +  A + ++  Q L  +  S L     D +             +  +  Q      
Sbjct: 94  TARAEAQAARFREERQSLVAQRESILRSAREDQLALARTVAEEDRQRIQQLESQLQQYQA 153

Query: 233 -----------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280
                      +   FD  S+   P     L+ + E L    +    I GHTD+      
Sbjct: 154 RETEAGTVLTLSNINFDLDSATLSPGDRQRLRPLVEYLRSQPDRAVLIEGHTDSQ---GP 210

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A  N  LS  RA +    L+  G+   RI+   G        +++       NRRI++ V
Sbjct: 211 AAYNEELSQRRAEAVRDFLVDQGIQAARITT-RGLGEGVPVASNETQAGRLQNRRIEVTV 269

Query: 339 EDRQ 342
           E+  
Sbjct: 270 ENPP 273


>gi|161520025|ref|YP_001583452.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189353793|ref|YP_001949420.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|160344075|gb|ABX17160.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189337815|dbj|BAG46884.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
           ATCC 17616]
          Length = 220

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+    A  +   +S+ G+TD+         N  LS  R
Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAHADRSYTQVSVTGYTDSV---GSDASNLALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L + G++  R   ++G        ++        NRR++I ++ 
Sbjct: 171 AEAVAAYLQQRGLNA-RTLTVTGRGSADPIASNATAEGRATNRRVEISLQR 220


>gi|119897129|ref|YP_932342.1| outer membrane protein [Azoarcus sp. BH72]
 gi|119669542|emb|CAL93455.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
          Length = 224

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD       PE   VL +    L   T   +SI GHTD++        N  LS
Sbjct: 110 DIPSDVSFDTGRYDIKPEMRPVLDRFANTLNQHTVTTVSIIGHTDST---GSDAVNNPLS 166

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           ++RA +    L+  GV+  RI  I G         +      + NRR++I V
Sbjct: 167 VNRAAATRDYLVARGVAGSRI-AIDGRGAREPIADNGTVAGRAQNRRVEIFV 217


>gi|296127617|ref|YP_003634869.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
 gi|296019433|gb|ADG72670.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
          Length = 403

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 15/153 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++        L   + D+    V  +T   G+++ +       +FD  S    PE    +
Sbjct: 262 KEEEDYNRKKLENDLYDD--DNVTIDTVPEGLVVRL----GEILFDTDSYTLRPEAKNTI 315

Query: 253 QKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             I + +  +       + GHTD +        N  LS  RA S     +   +  D++ 
Sbjct: 316 DNIVKAIKETYPDREIIVEGHTDNT---GRKEYNQELSEKRAKSVADY-ILPNLEHDKL- 370

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              G A      ++D       NRR+DI+++ R
Sbjct: 371 SYKGLADEEPIASNDTADGRQKNRRVDIIIKLR 403


>gi|305666954|ref|YP_003863241.1| OmpA family protein [Maribacter sp. HTCC2170]
 gi|88709183|gb|EAR01417.1| OmpA family protein [Maribacter sp. HTCC2170]
          Length = 217

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G        GI ++  ++     FD S S     +   L K+  +     
Sbjct: 69  QAERIEEEIPGAEVTRVGEGINVTFNEEAG-VYFDTSKSNVKGTSATTLDKLAGIFKEYP 127

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              + I GHTD+         N +LS  RA S    L+  G+  +R S    +  ++ K 
Sbjct: 128 NSDVLIEGHTDS---AGPDDYNMKLSQQRAESVTNYLISKGIEANRFST-KWYGENQPKA 183

Query: 323 ASDPMN--SANRRIDILVEDRQ 342
            ++     + NRR+++ +   +
Sbjct: 184 DNETTEGKAKNRRVELAIIASK 205


>gi|157889011|dbj|BAF80958.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G+VL  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQTSINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L KSGV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|320354509|ref|YP_004195848.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320123011|gb|ADW18557.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 212

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD +SS   P     L +I  VL +  +    + GHTDA       + N +LS  RA +
Sbjct: 110 FFDTNSSQLKPGAYNELNRITNVLNNYPQTTIRVEGHTDAR---GSDQYNQQLSERRAMA 166

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
               L + GV+  RI  + G+   +   +SD   + NRR++I++
Sbjct: 167 VKNALAQQGVNPSRIEAV-GYGESQPISSSD---AMNRRVNIVI 206


>gi|134095751|ref|YP_001100826.1| putative outer membrane protein 3a (II*;G;d) [Herminiimonas
           arsenicoxydans]
 gi|133739654|emb|CAL62705.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
          Length = 205

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  P+    L  +   L      + I  GHTD+         N +LS+ RA +    L+ 
Sbjct: 106 VLKPDGKAKLDDLASKLKDLNLEVIIAVGHTDSI---GSDAYNQKLSIRRAEAVKGYLVG 162

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            G+   R+    G    +    +      + NRR++I V   +
Sbjct: 163 KGIDAKRVYT-EGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 204


>gi|116327052|ref|YP_796772.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332289|ref|YP_802007.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116119796|gb|ABJ77839.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116125978|gb|ABJ77249.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 458

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 12/143 (8%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +             V    T  GI IS+    N+ +FD +SS    E  + L++I  VL
Sbjct: 321 ENKTKQETMKVSGSPVEIRRTEEGIAISL----NSVLFDYNSSQLKDEAKLELRRIASVL 376

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAH 317
               +  I I GHTD          N +LS +RA S  + L  + G+ E R+    G+  
Sbjct: 377 KKYGDREIRISGHTDN---SGGDEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGK 432

Query: 318 HRLKIASDPM--NSANRRIDILV 338
            +    +        NRR+DI +
Sbjct: 433 SKPIADNSTAQGRQKNRRVDITI 455


>gi|242277509|ref|YP_002989638.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242120403|gb|ACS78099.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 241

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 13/221 (5%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +  +               D ++ K    S  L  ++  +        + E     +R  
Sbjct: 23  LADMMTLLLCFFVLLLAIADVDQKKYKDVSDSLASAMGVDVPPKGANDTYEGAPVARRVI 82

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             Q             +       +  +     + I +   +    F    +        
Sbjct: 83  SDQQRNIFEMQLEMARLVGRESDALKIKMRPDSVAIVL---KGGFFFPSGQADLTSGARR 139

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL KI   LA S   + + GH+D  P R+     NW LS  RA +  + L+ +G S+DRI
Sbjct: 140 VLGKIAPTLAKSPYQVVVEGHSDNIPIRSKQFPSNWELSSARASAVARYLLDNGFSKDRI 199

Query: 310 SKISGFAHHRLKIASDPMNS--------ANRRIDILVEDRQ 342
             + G A       ++  N          NRR+ +LV   +
Sbjct: 200 K-VLGMADTAPAYPNEDDNGNAIPANQKRNRRVVLLVYPPK 239


>gi|171915499|ref|ZP_02930969.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 355

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 97/302 (32%), Gaps = 20/302 (6%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
            +        KA     NP       A + I D   P ++ ++ ++   + +       D
Sbjct: 55  SMLPVTQTKAKADRIAINPEALKEQQAIQHIPDLIAPSDK-AEPQLKADLQDIAEMIPED 113

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
             +  T    +           + +  +     +   D   G DL  S D  KS    + 
Sbjct: 114 RPLNLTPDVDKVTNFLAPKSNPNATSPAHAPSMAAIADMAPGPDLASSMDAIKSSALRQA 173

Query: 173 YFLPPLSKEKILAMKRKK--------RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
                L        K  +        RL + +K    +   +   + ++ +L        
Sbjct: 174 VSDQQLVLPAKPLDKELEGMDGKLLDRLNNQSKAGDGSPRAMAGYSNLEDLLARGGAVNA 233

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
             + I      +F+  S        + L K+G ++  +      I GHTD       A  
Sbjct: 234 STAPIMLPTDLLFEYGSDQLAENARLSLMKLGYLITKNPNSRFIIEGHTDTI---GSAEF 290

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI---ASDPMN--SANRRIDIL 337
           N  LS  RA +    L++S  +S DRI  + G    R       +      + NRR++I 
Sbjct: 291 NLDLSQRRANAVVGWLIRSLRLSNDRIDAV-GMGESRPLARVNPNGTKEEQALNRRVEIK 349

Query: 338 VE 339
           V 
Sbjct: 350 VR 351


>gi|328946962|ref|YP_004364299.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
 gi|328447286|gb|AEB13002.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
          Length = 488

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               K+S + +    +    S        K+           K    K+K    ++  KI
Sbjct: 293 ESEKKSSGSIEKNDFESGANSRRNNSYAEKKIAKNENQTYGAKNHPQKKKDSADEIQSKI 352

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           S+  +        K V+ E T  GI +++ +      F   SS  LP     L +I +VL
Sbjct: 353 SAGKNSSSNSKSEKKVIVENTAAGIRLTMQNLN----FKPDSSELLPGENERLDQIAQVL 408

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               + +  + GHT +  +        +LS++RA S    L++ G+  ++     G    
Sbjct: 409 KEVPDQMFLVEGHTASVGYEKGE---MKLSVERANSVANALIQRGIPREKFI-CKGSGGT 464

Query: 319 RLKIASDPMN--SANRRIDILVED 340
           +    +      + NRR++I + +
Sbjct: 465 KPIADNSTPEGKAKNRRVEITILE 488


>gi|254447788|ref|ZP_05061253.1| OmpA family protein [gamma proteobacterium HTCC5015]
 gi|198262568|gb|EDY86848.1| OmpA family protein [gamma proteobacterium HTCC5015]
          Length = 225

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 10/176 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I+ ++        +    A         +   +    + L       GV  E     I +
Sbjct: 51  IDNKDADSDKRQERILEAAGGGALIGGGVGYYMDRQEAKLREKLRDSGVSVERDGDNINL 110

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285
            +        F   SS        VL  +  VL      ++++ GHTD++        N 
Sbjct: 111 IM---PGNITFQTDSSDVSSSFYNVLDSVAIVLEEFDKTIVAVSGHTDST---GSDSYNQ 164

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            LS  RA S    L   GV  +R  ++ GF   R    +   +    NRR++I + 
Sbjct: 165 VLSEKRASSVASYLKSKGVLNERF-EVIGFGEARPIADNSTESGREQNRRVEITLL 219


>gi|82701882|ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
 gi|82409947|gb|ABB74056.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 225

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   +   P    VL      L ++    ++I GHTD+         N  LS
Sbjct: 108 DIPSDISFDTGRADIRPNFRPVLDSFATSLNNNPITEVTIIGHTDS---SGSDAVNNPLS 164

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           L+RA S    L   GVS +R+ +I G       +A+D     + NRR++I V + +
Sbjct: 165 LNRAASTRDYLASRGVSPNRV-RIEGRGSREPIVANDTPQNRARNRRVEIYVAEPK 219


>gi|244538688|dbj|BAH82838.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        PE    +Q++G+VL  + +  +I  GHTD++        N +LSL+RA + 
Sbjct: 224 FGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L KSGV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|153837220|ref|ZP_01989887.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
 gi|260366108|ref|ZP_05778568.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
 gi|260879749|ref|ZP_05892104.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
 gi|260896795|ref|ZP_05905291.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
 gi|260903584|ref|ZP_05911979.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
 gi|149749483|gb|EDM60237.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
 gi|308087342|gb|EFO37037.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
 gi|308092264|gb|EFO41959.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
 gi|308109501|gb|EFO47041.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
 gi|308114754|gb|EFO52294.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
          Length = 430

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A         L  +     V  E  +  + IS+  Q    +F+  S+  +     V+ K+
Sbjct: 285 APIAERISMYLATEIGKDLVTVEALQDRVRISLKAQD---LFESGSASVVAYIQPVISKV 341

Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   I I GHTD  P   +    NW LSL RA S  + L+ +   + R+    G
Sbjct: 342 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNSALKGRVIP-EG 400

Query: 315 FAHHRLKIASDPM--NSANRRIDI 336
               R  + +D     + NRRI+I
Sbjct: 401 LGDARPLVENDSEKNRAMNRRIEI 424


>gi|74316262|ref|YP_314002.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
 gi|74055757|gb|AAZ96197.1| probable outer membrane protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 331

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 85/247 (34%), Gaps = 15/247 (6%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               E   + + ++ +   + ++   RLE     ++ ++Q         +   +      
Sbjct: 88  AIAQETAKRKAAEISVTEASAERDRVRLEARTAEVAAARQQATQAELTAQQQAERDRALI 147

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +    +     +       +  +        RL+    +            +      + 
Sbjct: 148 AEREAEVEAARQQAATAEEAARQRADALEAARLEIQRAQTRIAEQEEQLQALN----AKK 203

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278
           T  G+++++ D     +F  + +   P  +  +QK+ + L         I GHTD++   
Sbjct: 204 TDRGLVVTLGD----VLFGVNKADLTPGGMRNVQKLADFLKQYETRKLLIEGHTDST--- 256

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L+  GV  +RI    G+       +++       NRR+++
Sbjct: 257 GGDALNQALSERRAEAVKTALIGMGVDGERI-ATRGYGKAFPVASNNTAAGRQLNRRVEV 315

Query: 337 LVEDRQG 343
           ++ +  G
Sbjct: 316 VLSENGG 322


>gi|28900895|ref|NP_800550.1| hypothetical protein VPA1040 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809341|dbj|BAC62383.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 433

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A         L  +     V  E  +  + IS+  Q    +F+  S+  +     V+ K+
Sbjct: 288 APIAERISMYLATEIGKDLVTVEALQDRVRISLKAQD---LFESGSASVVAYIQPVISKV 344

Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   I I GHTD  P   +    NW LSL RA S  + L+ +   + R+    G
Sbjct: 345 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNSALKGRVIP-EG 403

Query: 315 FAHHRLKIASDPM--NSANRRIDI 336
               R  + +D     + NRRI+I
Sbjct: 404 LGDARPLVENDSEKNRAMNRRIEI 427


>gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 417

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 22/278 (7%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQ--NKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +YF      L    + +   Q    + +              T+ +   +         
Sbjct: 146 AKYFLNDKVALRGDVRHLIYRQASETQHAVEYTMGLHFPFGGKTEAAPVAEPAPEPVVAP 205

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKE 181
               +++   + ++  +        +   KG  L    D   +   N         +  +
Sbjct: 206 VAPSDSDGDGVFDTADNCPGTPQGVKVDAKGCPLDSDRDGVYDYQDNCPGTPEGVKVDTK 265

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                  K  + D   K   T  G   D     V    + T + I          FD + 
Sbjct: 266 GCPLDSDKDGVYDSYDKCPGTPEGTTVDKTGCPVKL-CSPTVLNIE---------FDTNK 315

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S   P+    L+++ + LA       +I GHTD          N +LS  RA S    L+
Sbjct: 316 SNIKPQYNDELKRVADFLAEFPTAKGAIEGHTDNV---GGKAYNMKLSQRRANSVRSYLI 372

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           K+  V+ +RIS   G    +   ++   +    NRRI+
Sbjct: 373 KTFNVAPERISA-KGHGLTKPVASNKTADGRKQNRRIE 409


>gi|126664984|ref|ZP_01735967.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
 gi|126630354|gb|EBA00969.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
          Length = 261

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 8/188 (4%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                      G+        +            PLS        R + LQ+LA ++   
Sbjct: 59  APERSVVPITVGEQPVAGGRSDTDAVIAPVVTEAPLSLPAPDNASRSRALQELAGQLGQE 118

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
            S L+       +        + +++    N+ +F    + P  ++  V++KI  VL  +
Sbjct: 119 FSALIEGG---VISLNADDEWLQLNL---PNSLLFGSGDAEPHYDSFAVMEKIAGVLRDT 172

Query: 263 TEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I I G TD    R      NW LS  RA    ++L+  G+   R++ + G+  H+  
Sbjct: 173 DNAIRIEGFTDNQSIRSGRFPSNWELSAARASVLVRMLVMDGIDPARLAAV-GYGEHQPV 231

Query: 322 IASDPMNS 329
             +D    
Sbjct: 232 ARNDTDEG 239



 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 1/136 (0%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++++    D  ++   W I YADF+T+L AFF+VM+ +++ ++   K +           
Sbjct: 1   MRRRKPPQDDFHHKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSNTLTGVFNAP 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             +   I   + P     ++  D  I   +T+  + L       + +  +          
Sbjct: 61  ERSVVPITVGEQPVA-GGRSDTDAVIAPVVTEAPLSLPAPDNASRSRALQELAGQLGQEF 119

Query: 137 SQQSEHCKNSLTRDSE 152
           S   E    SL  D E
Sbjct: 120 SALIEGGVISLNADDE 135


>gi|110637965|ref|YP_678172.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280646|gb|ABG58832.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 641

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           +        I I      N   FD + S    E+   L K+ ++L+ + ++   + GHTD
Sbjct: 516 IDDVICLDKIDIGTTIVLNNVFFDVNKSTLRKESETELDKLFDILSKNPKIKIEVAGHTD 575

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SAN 331
           +       + N  LS  RA++    L+  G+S DRI  + G    +  + +D       N
Sbjct: 576 SD---GDTQANLTLSDARAHTVKDYLIGKGISADRIIYV-GHGEGKPVVPNDTPENKQLN 631

Query: 332 RRIDILVED 340
           RR +I + +
Sbjct: 632 RRTEIKILE 640


>gi|257463423|ref|ZP_05627818.1| Outer membrane porin F [Fusobacterium sp. D12]
 gi|317060987|ref|ZP_07925472.1| outer membrane porin F [Fusobacterium sp. D12]
 gi|313686663|gb|EFS23498.1| outer membrane porin F [Fusobacterium sp. D12]
          Length = 193

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 10/134 (7%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
              GV        +++S+       +FD             L+ +   L  ++++   I 
Sbjct: 67  NQDGVTIRREGNNLILSM---PELILFDFDKYEVKDGIKPSLRTLANALGANSDIKIKID 123

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           G+TD   F      N  LS++RA +    L+  G  E+ I  I G+       ++     
Sbjct: 124 GYTD---FIGSEGYNLELSVNRAKAIKSYLVNHGAIENNI-SIEGYGKQNPVASNATESG 179

Query: 328 NSANRRIDILVEDR 341
            + NRR++ ++   
Sbjct: 180 RARNRRVEFIISRS 193


>gi|225873103|ref|YP_002754562.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
 gi|225791640|gb|ACO31730.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
          Length = 508

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   +   +   +    +  G+++++ D     +F   S        + L +I  +L   
Sbjct: 345 MRNRLEQQLNAVLATRESARGLIVNMSD----VVFATGSYQIKTSAQIKLARIAGILMTY 400

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               + + G+TD       A  N +LS  RA +  + L+  GV  + IS   G+      
Sbjct: 401 PGLKVQVEGYTDNV---GSAAFNQKLSNQRANAVMKFLISQGVKANSISA-KGYGEADPV 456

Query: 322 IASDP--MNSANRRIDILV 338
            +++     + NRR+ ++V
Sbjct: 457 ASNNTVAGRAKNRRVQLVV 475


>gi|328470797|gb|EGF41708.1| hypothetical protein VP10329_08362 [Vibrio parahaemolyticus 10329]
          Length = 430

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A         L  +     V  E  +  + IS+  Q    +F+  S+  +     V+ K+
Sbjct: 285 APIAERISMYLATEIGKDLVTVEALQDRVRISLRAQD---LFESGSASVVAYIQPVISKV 341

Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +   I I GHTD  P   +    NW LSL RA S  + L+ +   + R+    G
Sbjct: 342 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLIANSALKGRVIP-EG 400

Query: 315 FAHHRLKIASDPM--NSANRRIDI 336
               R  + +D     + NRRI+I
Sbjct: 401 LGDARPLVENDSEENRAMNRRIEI 424


>gi|304384331|ref|ZP_07366742.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
 gi|304334647|gb|EFM00929.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
          Length = 226

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 6/149 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K +    +   A      V   T   G+    +   +  +F  + +     +   L    
Sbjct: 69  KHMDKVKAQTQAQVQNAKVEEVTDVNGLKAVKVTFDSGILFALNKAELNATSKNELMNFS 128

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL  +T+    I+G+TD++        N  LS  RA +    L + GV   +   + G+
Sbjct: 129 NVLKKNTDCQVDIQGYTDST---GNDDINLPLSNSRAQAVVSYLAQCGVPYSQFKNVKGY 185

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                   +        NRR+++ +   +
Sbjct: 186 GSSNPVADNSTEAGRKQNRRVEVYIYAGE 214


>gi|166713623|ref|ZP_02244830.1| hypothetical protein Xoryp_19825 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 224

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS     A+K+++      + +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSNRLDEAVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     + + L    E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLAAPLAQYLRTREEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|126736820|ref|ZP_01752555.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
 gi|126721405|gb|EBA18108.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
          Length = 205

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 10/150 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++ +    L        +    T   +++S  +      F   S+   P     L+ + 
Sbjct: 63  NQLDAQERELRQSLANDSISIVNTGDRLILSFPNDLT---FATDSAAISPVVQADLRSVA 119

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L       + + GHTD+      A  N  LS  RA +    +   GV   R+ +I G 
Sbjct: 120 GSLVRYPNSTVQVIGHTDSD---GDASYNQGLSERRANAVADQIQAGGVPYHRL-RIIGL 175

Query: 316 AHHRLKIASDPMN--SANRRIDILVEDRQG 343
              +   ++      + NRR+++++  + G
Sbjct: 176 GEEQPVASNLTPEGKARNRRVEVVIIPQAG 205


>gi|124022953|ref|YP_001017260.1| hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963239|gb|ABM77995.1| Hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
           9303]
          Length = 252

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L    + +  ++  L        +  +     ++    +     +FD   +   P  + 
Sbjct: 99  DLDYQIQGLDYSMKDLTYSINDLNITTKQENEVLI----ELAADVLFDFDKANLKPSAVA 154

Query: 251 VLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L+ + + +  +    + + GHTD+   +     N  LS  RA S     +  G   +  
Sbjct: 155 SLETVAKRIRETSQGDVRVEGHTDS---KGSNEYNQTLSEKRAISVRDWFVSDGGLSNVQ 211

Query: 310 SKISGFAHHRLKIASDPM--------NSANRRIDILVE 339
               GF   +  +++              NRR++I+++
Sbjct: 212 FVTKGFGELKPVVSNTTEKGGDNPIGRQRNRRVEIIIK 249


>gi|225619153|ref|YP_002720379.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
 gi|225213972|gb|ACN82706.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
          Length = 403

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 15/153 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++        L   + ++    V  +T   G+++ +       +FD  S    PE    +
Sbjct: 262 KEEEDYNRKKLEDNLYND--DNVTIDTVPEGLVLRL----GEILFDTDSYTLKPEAKNTI 315

Query: 253 QKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             + + +  +       + GHTD +        N  LS  RA S     +   +  D++ 
Sbjct: 316 DNVIKAIKETYPDREIIVEGHTDNT---GRKEYNQDLSEKRAKSVADY-ILPNLDHDKL- 370

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              GFA      ++D       NRR+DI+++ R
Sbjct: 371 SYKGFADDEPIASNDTPDGRRKNRRVDIIIKLR 403


>gi|117621479|ref|YP_855927.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562886|gb|ABK39834.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 308

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 7/180 (3%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           ++  + +  E+      S   I  +   +    LAK  +     + +      V      
Sbjct: 80  EVSAASSVLESATARSPSLAPISVVPIAQDGMTLAKIDTQLQESMGSLVDAGVVKLTLND 139

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280
             + + +    +  +F   S+        VL  +  +L      + +RG+TD     N  
Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNADPVLNTLSSILKQVDNYVRVRGYTDNQQINNEI 196

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            R NW LS  RA +    L+  G++  R+     +        +        NR++ + +
Sbjct: 197 FRSNWTLSAARAEAVLTALIAKGIAPQRL-AYEAYGEFSPFTDNSTEQGRLQNRKVVVAI 255



 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + K+         +L  W + YAD+MT++ A F+V++ +   + D  +A+          
Sbjct: 1   MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           +   S G+ + Q     +++     S+ E  T  S  L   S     Q       I    
Sbjct: 61  MQPRSDGLLEGQGKSLLNNEVSAASSVLESATARSPSLAPISVVPIAQDGMTLAKIDTQL 120

Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158
                      + + +     L 
Sbjct: 121 QESMGSLVDAGVVKLTLNDNWLT 143


>gi|305667009|ref|YP_003863296.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
 gi|88709244|gb|EAR01478.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
          Length = 283

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 9/172 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L               R   +   +  +L G++ +   + +     +  + +SI D+ 
Sbjct: 99  ESLQEKDLTIRKLQNAITRRDSVNLSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL 158

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLD 290
              +F   S         +L K+ +V+ +  +    + GHTD  P+ + +  DNW LS  
Sbjct: 159 ---LFSSGSYNITSRAKEILGKVAKVVNNKPDFEFMVEGHTDDVPYRKGVLLDNWDLSAK 215

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           RA +  ++L    GV   R++   G A       S    S NRR  I+V  +
Sbjct: 216 RATAVVRILQNDYGVDPKRMTAA-GRAEFVPV--SQTQKSKNRRTRIVVLPK 264


>gi|256370966|ref|YP_003108790.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007550|gb|ACU53117.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
          Length = 258

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 10/196 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
             +  +   +      S+         P                 +A++++  L+     
Sbjct: 61  QLQSLEHGGRGLLQHSSLVTHPGLTPGPPQITIPQPGAGTPSESQIAQEVNQALAAQGLS 120

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
              + V+ +      ++S     +   F   S+   P    V+  I  VL      +SI 
Sbjct: 121 QDAQVVVEQRGVVVRILS-----DKVFFATDSAALGPVGDAVVDAIAGVLRTLPNDVSIE 175

Query: 270 GHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326
           G+TD+ P        N+ LS  RA +  + L K  G++ DR+S  +GF      + +   
Sbjct: 176 GYTDSEPIVGGPYSSNFELSAVRAVTVLERLWKVDGINPDRLSA-TGFGDTHPLVPNTTP 234

Query: 327 -MNSANRRIDILVEDR 341
              + NRR+DI++   
Sbjct: 235 QNMAMNRRVDIVILSS 250



 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 1/122 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   +    N   W + Y+D +T+L+A F+V++ +++         +         +  
Sbjct: 3   RRHHGEGEAENSERWLLTYSDMITLLLALFVVLFAMSSISVRKFDEFKTGLLQTFSQMQL 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            S      +   + SS                     G+ ++ +  Q +   +     SQ
Sbjct: 63  QS-LEHGGRGLLQHSSLVTHPGLTPGPPQITIPQPGAGTPSESQIAQEVNQALAAQGLSQ 121

Query: 139 QS 140
            +
Sbjct: 122 DA 123


>gi|37676652|ref|NP_937048.1| hypothetical protein VVA0992 [Vibrio vulnificus YJ016]
 gi|37201195|dbj|BAC97018.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 442

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 7/141 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            +     L  +  +  +  +     + I+        +F+  S+  +     V+ K+   
Sbjct: 289 ANQIQRSLATEIEMGLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345

Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   I + GHTD +P   +    NW LSL RA +    L  +G    R+    G   
Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGD 404

Query: 318 HRLKIASDPMNSA--NRRIDI 336
            R  ++++ +     NRR++I
Sbjct: 405 ARPLVSNETVEGRSINRRVEI 425


>gi|110642959|ref|YP_670689.1| OmpA family membrane protein [Escherichia coli 536]
 gi|191171277|ref|ZP_03032827.1| OmpA domain protein [Escherichia coli F11]
 gi|300976455|ref|ZP_07173440.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|110344551|gb|ABG70788.1| putative OmpA-family membrane protein [Escherichia coli 536]
 gi|190908577|gb|EDV68166.1| OmpA domain protein [Escherichia coli F11]
 gi|300308536|gb|EFJ63056.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|324015357|gb|EGB84576.1| OmpA family protein [Escherichia coli MS 60-1]
          Length = 550

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 73/269 (27%), Gaps = 20/269 (7%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH------- 142
             R+             T    D  +    ++  +  L      +     +         
Sbjct: 277 TARTGLTTDIADTGTDATLPFPDALLRQLPRQSGFTPLRRACVTMLGITTAAGITMLCLS 336

Query: 143 ----CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                +       +  +      +   +  +  +      +       + +     L   
Sbjct: 337 ATANRQLLRQVGDDLHRFYAVPVEEFITKARHLSVLKDNATMLDGYYREGEPLRLGLGLY 396

Query: 199 ISSTLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
               +   V   I      E        + +  +   +  +FD   +     +  VL   
Sbjct: 397 PGERIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +      +  + G+TDA+      + N +LSL RA +    ++++         + G
Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
               +    +D     + NRR++I +  R
Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|71280429|ref|YP_268267.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
 gi|71146169|gb|AAZ26642.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
          Length = 329

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 8/206 (3%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
               E  KN    D     +  K+          +      L  EK L+     ++    
Sbjct: 60  QASEEETKNRGHGDGVLMVNTSKTNIKLYGNGILDIAGPELLDNEKNLSNISDAKVGSNL 119

Query: 197 KKISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             +   L   + +         +     + I +    +  +F   SS        +L  I
Sbjct: 120 SSLEKELHTALYELVESGFAQLQIDGDWLEIELN---SGLLFPSGSSSATLSAEAILTVI 176

Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +V+  ++  I +RG+TD     N     NW LS+ RA +  +VL K G++  R+  I G
Sbjct: 177 YDVIGQASNFIRVRGYTDNQVINNEIYSSNWELSVFRATAILRVLEKLGLNPARM-AIEG 235

Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338
           +  +     +      + NR++ + +
Sbjct: 236 YGQYYPSADNLTSEGRAKNRKVVVAI 261



 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 93/298 (31%), Gaps = 30/298 (10%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + K++ A++    +   W + YAD+MT++ A F+V++ +   ++   ++I + F    + 
Sbjct: 4   VRKRRAAVEHDNIH--RWLVSYADYMTLMFALFVVLYAMAMVNEKPFESITESFGRVFQA 61

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
               +K           ++           I   +    +   + +K    + +     +
Sbjct: 62  SEEETKNRGHGDGVLMVNTSKTNIKLYGNGILDIAGPELL---DNEKNLSNISDAKVGSN 118

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            S   +    +L    E G    +       I        P  S    L+ +    L  +
Sbjct: 119 LSSLEKELHTALYELVESGFAQLQIDGDWLEIELNSGLLFPSGSSSATLSAE--AILTVI 176

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I    + +         +                       S+          + ++
Sbjct: 177 YDVIGQASNFIRVRGYTDNQVINNEIY----------------SSNWELSVFRATAILRV 220

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS--AYQVLMKSGVSEDRISK 311
            E L  +   ++I G+    P    + DN   S  RA +      + K G+ +  + +
Sbjct: 221 LEKLGLNPARMAIEGYGQYYP----SADNLT-SEGRAKNRKVVVAISKYGLEKANLLQ 273


>gi|332664439|ref|YP_004447227.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333253|gb|AEE50354.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 228

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +  + +++ K    E     IL++     +  MFD  S      T   L K  E +    
Sbjct: 83  ARKLKEDLGKSAEVERVGESILVTF---DSGIMFDVDSYALKAATRANLDKAAETMKEYD 139

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I + GHTDA+        N +LS +RA +    L ++GV+  R++K  GF   +   
Sbjct: 140 KTEIIVMGHTDAT---GSDEYNQKLSENRAAAVSSFLQQNGVTASRLTK-KGFGEQKPVA 195

Query: 323 ASD--PMNSANRRIDILVEDRQ 342
           ++        NRR++I +   +
Sbjct: 196 SNTSVSGREQNRRVEIAIVASK 217


>gi|331658933|ref|ZP_08359875.1| OmpA family of outer membrane porins [Escherichia coli TA206]
 gi|331053515|gb|EGI25544.1| OmpA family of outer membrane porins [Escherichia coli TA206]
          Length = 550

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 72/269 (26%), Gaps = 20/269 (7%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
             R+             T    D  +    ++  +  L      +               
Sbjct: 277 TARTGLTPDIADTGTDDTLPFPDALLRRLPRQSGFTPLRRACVTMLGITTVAGIAALCLS 336

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS--------- 200
            +   + L +  D                ++   +       L    ++           
Sbjct: 337 ATANRQLLRQVGDDLHQFYAVPAEEFITKARHLSVLKDDAVMLDGYYREGEPLRLGLGLY 396

Query: 201 --STLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
               +   V   I      E        + +  +   +  +FD   +     +  VL   
Sbjct: 397 PGERIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +      +  + G+TDA+      + N +LSL RA +    ++++         + G
Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
               +    +D     + NRR++I +  R
Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|188532760|ref|YP_001906557.1| hypothetical protein ETA_06130 [Erwinia tasmaniensis Et1/99]
 gi|188027802|emb|CAO95659.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
          Length = 413

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 7/141 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++++   +   +F  +S+        VL ++   + + +  
Sbjct: 264 LKPEIEQGLVAVRDEADRSVVTL---KGDGLFTSASTEVRGRYAEVLDRVAAAMNNVSGR 320

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S    L +      R+    G         +
Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSGQLRQHLSQPQRVKA-EGRGESSPLAPN 379

Query: 325 DPM--NSANRRIDILVEDRQG 343
           +     + NRR++I +    G
Sbjct: 380 NSAENRARNRRVEITLLVSPG 400


>gi|312959355|ref|ZP_07773872.1| OmpA family protein [Pseudomonas fluorescens WH6]
 gi|311286072|gb|EFQ64636.1| OmpA family protein [Pseudomonas fluorescens WH6]
          Length = 261

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%)

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
               +  + +        +   N   ++  +  +        D        +    + + 
Sbjct: 21  STPPNANLENARTNFSALQANPNATKVAALETKDAQDWLDKADKAYRDKEDQKKVDQLAY 80

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +   +   +     +  + K   D   +            +   +  + T  G L++
Sbjct: 81  LTNQRVEVAKDTIALRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 140

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
             D     +F  + S      +V + K+ + L  + +    + G+TD++        N  
Sbjct: 141 FGD----VLFATNKSDLKSTGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 193

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           LS  RA S  + L + GV   RI    G+        +      + NRR+++ + +  
Sbjct: 194 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250


>gi|218888823|ref|YP_002437687.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
 gi|218769046|emb|CAW24806.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
          Length = 449

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F  +S+    E   +L +I + L      
Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323
           + + GH+D  P        NW+LS  RA     +L  +     R +   G +      + 
Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVASN 427

Query: 324 -SDPMNSANRRIDILV 338
            +    + NRR++I V
Sbjct: 428 ANAEGRARNRRVEITV 443


>gi|146339724|ref|YP_001204772.1| putative Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Bradyrhizobium
           sp. ORS278]
 gi|146192530|emb|CAL76535.1| Conserved hypothetical protein; Putative Outer membrane protein and
           related peptidoglycan-associated (lipo)proteins
           [Bradyrhizobium sp. ORS278]
          Length = 707

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 85/288 (29%), Gaps = 18/288 (6%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            A  +    A+   F     ++       +      +           D+   ++ VD  
Sbjct: 435 AAVREALASALPAPFTLAAVDVRDGPISPYAFGLQKQDGRVRLSGYVPDDAARRDLVDAA 494

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             +   +     L+       +   S             G    K   +           
Sbjct: 495 TATFVTETVEDGLKTGAGAPKDFVTSLKATFPALARLWSGTLSAKDAAITIEGQAIYEKS 554

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              + KE   A     +L  +   +      L              +  I          
Sbjct: 555 AEQVRKELADAGGGDIKLAGVTIGLKPESPPLAVAECQPAFEGLLAKGRIR--------- 605

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S+    E++ +L  I +V     E  I+I GHTD         DN  LS  RA 
Sbjct: 606 --FATGSAELSRESLALLDHIVDVAQRCKEAEITIEGHTDNV---GNEADNIDLSKRRAA 660

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +    + ++G+   R+S   G+  +R   ++D     + NRRI+ +V+
Sbjct: 661 AVVSYISEAGIDTSRMSS-EGYGQNRPVASNDSAEGRAQNRRIEFVVK 707


>gi|238916758|ref|YP_002930275.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
 gi|238872118|gb|ACR71828.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
          Length = 266

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 7/166 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               +       K+ L+            L A  +   +        +++++       +
Sbjct: 98  SQDIQNAYDEIEKEGLEQSESMAQEIKDKLTASGVADQIEVTAYSKYVMLNVN---GGIL 154

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           FD   +   P+ + +L K+ + L      VI+I GHTD  P       +N  LSL RAYS
Sbjct: 155 FDSGKAELTPQALTLLDKVADALIEYDDNVITIEGHTDNVPINTSRYPNNMMLSLYRAYS 214

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            +   +      D+    SG         +      + NRR++I V
Sbjct: 215 VFDFFVSDKGFSDKTMSSSGRGDAVPIADNGTPEGRAQNRRVEIKV 260


>gi|256830500|ref|YP_003159228.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579676|gb|ACU90812.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 242

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 8/162 (4%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +    A+   +R++DL         G+    + + +       GI + + D     +F  
Sbjct: 80  ENPAEALHDPQRIKDLLFPDEVLPEGMARSTLNENLQILVRPEGIALVLSDGM---LFGV 136

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             S    ++  +L +  + LA  T  +++ G+TD  P     +DN+ LS +RA S     
Sbjct: 137 GESALTEDSRKLLSEFAQFLASVTMPVNVAGYTDNIPAG--QKDNYMLSSERAMSVLTFF 194

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           ++ G    R   +S +        +      + NRR++IL++
Sbjct: 195 LQQGFDPRRF-SVSAYGEAFPLGDNATPEGRAKNRRVEILLK 235



 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 30/64 (46%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          ++    +  +   SW + +AD MT+L++FF+++  +++ D    + +  +F         
Sbjct: 3  RRKKRAELESPGASWMVTFADLMTLLLSFFVLLLSMSSMDKSILRDVVSHFVGDMGLAPK 62

Query: 79 ASKG 82
             G
Sbjct: 63 KGAG 66


>gi|301056021|ref|YP_003794232.1| motility protein B [Bacillus anthracis CI]
 gi|300378190|gb|ADK07094.1| motility protein B [Bacillus cereus biovar anthracis str. CI]
          Length = 262

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            ++     + NRR+++ + 
Sbjct: 237 PNNTQEGKAKNRRVEVFIL 255


>gi|124007678|ref|ZP_01692381.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123986800|gb|EAY26572.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 705

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270
              +        + ++     N   F   SS    ++ V L K+ +++ ++ ++   I  
Sbjct: 573 GDVIKLTVALEVLKMNAKIVLNHINFASGSSKLDEDSYVELAKVVQLMENNKDIKLEISA 632

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
           HTD      +   N RLS  RA S +  L+K+GV + R+    G+   R  + +      
Sbjct: 633 HTDNV---GVYSRNMRLSRQRAQSVFNYLIKTGVDKKRLVS-KGYGSARPLVPNTTKKNK 688

Query: 329 SANRRIDILV 338
           + NRR++  V
Sbjct: 689 AKNRRVEFKV 698


>gi|49478673|ref|YP_038563.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196034432|ref|ZP_03101841.1| chemotaxis protein MotB [Bacillus cereus W]
 gi|49330229|gb|AAT60875.1| motility protein B [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|195992974|gb|EDX56933.1| chemotaxis protein MotB [Bacillus cereus W]
          Length = 262

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            ++     + NRR+++ + 
Sbjct: 237 PNNTQEGKAKNRRVEVFIL 255


>gi|30043431|gb|AAP19151.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
 gi|56383924|gb|AAN45037.2| putative outer membrane protein [Shigella flexneri 2a str. 301]
 gi|332763439|gb|EGJ93678.1| ompA family protein [Shigella flexneri 2930-71]
          Length = 208

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 69  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 125

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 126 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 181

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 182 PANPIASNSTAEGKAQNRRVEITL 205


>gi|226946867|ref|YP_002801940.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
 gi|226721794|gb|ACO80965.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
          Length = 261

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 77/235 (32%), Gaps = 11/235 (4%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           +  +  +          +       L+  +  +  K     +        +    + +  
Sbjct: 22  SKPNPNLEQARAAFTALQGNPRAGQLAPLETQDAAKQLKQAEDSYQSGASEERVDQLAYL 81

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            +        +     A +  ++      +            + + +    T  G L++ 
Sbjct: 82  TQRRVEFAEQTILLRNAEREFQQTSSQRAEARLQARDAQIRQLQEELQASHTERGTLVTF 141

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
            D     +FD + +   P  +  +QK+ + L  + +    + G+TD++        N  L
Sbjct: 142 GD----VLFDYNRAELKPGGMHNVQKLADFLRANPQRQVIVEGYTDST---GSDAYNRDL 194

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           S  RA +    L+K G+   RI    G   +    ++      + NRR+++ + D
Sbjct: 195 SERRAGAVRIALIKMGIDPRRI-ATQGHGKNYPVTSNASPAGRAMNRRVEVTISD 248


>gi|330982864|gb|EGH80967.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 137

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
              +FD + +   P     + K+   L  + +    + G+TD++     A  N  LS  R
Sbjct: 19  GDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYNQSLSERR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
           A S    L++ GV   RI  + G+        +  +   + NRR+++ + +  
Sbjct: 76  ANSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 127


>gi|327480660|gb|AEA83970.1| outer membrane protein OprF precursor [Pseudomonas stutzeri DSM
           4166]
          Length = 299

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+       + N RLS  RA + 
Sbjct: 193 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 249

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             VL+ + GV  +R++ + G+   R    +        NRR++  VE 
Sbjct: 250 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVEAEVEA 296


>gi|256419593|ref|YP_003120246.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256034501|gb|ACU58045.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 671

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D   +   P++++VL  +  ++  +  +I  +  HTD+   +     N +LS  RA S 
Sbjct: 557 YDFDKATLRPQSLIVLDTVVSIMQDNPNIIIEMSAHTDS---KGKDEYNMKLSQKRAQSC 613

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340
              L+  G+S +R+    G+   R    +              NRR +  V  
Sbjct: 614 VDYLISKGISSERMIA-KGYGETRPIAPNTLPNGKDNPEGRQLNRRTEFKVLR 665


>gi|157156833|ref|YP_001464142.1| OmpA domain-containing protein [Escherichia coli E24377A]
 gi|157078863|gb|ABV18571.1| OmpA domain protein [Escherichia coli E24377A]
          Length = 550

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EQIRQPVLRAIRDYRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|306812301|ref|ZP_07446499.1| OmpA family membrane protein [Escherichia coli NC101]
 gi|305854339|gb|EFM54777.1| OmpA family membrane protein [Escherichia coli NC101]
          Length = 550

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 72/269 (26%), Gaps = 20/269 (7%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
             R+             T    D  +    ++  +  L      +               
Sbjct: 277 TARTGLTTDIADTGTDATLPFPDALLRQLPRQSGFTPLRRACVTMLGITTVAGIAALCLS 336

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS--------- 200
            +   + L +  D                ++   +       L    ++           
Sbjct: 337 ATANRQLLRQVGDDLHQFYAVPAEEFITKARHLSVLKDDAVMLDGYYREGEPLRLGLGLY 396

Query: 201 --STLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
               +   V   I      E        + +  +   +  +FD   +     +  VL   
Sbjct: 397 PGEHIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +      +  + G+TDA+      + N +LSL RA +    ++++         + G
Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
               +    +D     + NRR++I +  R
Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|220919426|ref|YP_002494730.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957280|gb|ACL67664.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 206

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +++ +   +FD  SS   PE I  L+++G+VLA    + I I G+TDA+        N  
Sbjct: 91  LVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRIRIEGYTDAT---GSKSMNEE 147

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LSL RA +  +VL+  GV E +I+ + G    R    +      + NRR+++ ++   
Sbjct: 148 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGTSAGRAQNRRVELHIDVPN 204


>gi|118479664|ref|YP_896815.1| flagellar motor protein MotB [Bacillus thuringiensis str. Al Hakam]
 gi|196044798|ref|ZP_03112032.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
 gi|118418889|gb|ABK87308.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
 gi|196024286|gb|EDX62959.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
          Length = 262

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 64  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255


>gi|238023638|ref|YP_002907870.1| hypothetical protein bglu_2g01470 [Burkholderia glumae BGR1]
 gi|237878303|gb|ACR30635.1| OmpA/MotB [Burkholderia glumae BGR1]
          Length = 438

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           R   MF    S   PE   VL K+   +A     + + G+TD+ P       DN  LS  
Sbjct: 328 RGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQPIHTREFPDNLVLSQK 387

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA     VL   G   +RI  I G    +    +      S NRR+++LV
Sbjct: 388 RAAFVADVLKAHGTPSERIVSI-GKGDAQPVADNATPQGRSRNRRVEVLV 436


>gi|74314194|ref|YP_312613.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
 gi|73857671|gb|AAZ90378.1| putative outer membrane protein [Shigella sonnei Ss046]
 gi|323166955|gb|EFZ52694.1| inner membrane lipoprotein yiaD [Shigella sonnei 53G]
          Length = 219

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLTEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|288927544|ref|ZP_06421391.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330378|gb|EFC68962.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 225

 Score = 97.7 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 9/150 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  V +  V+ V        + ++     +  +F  + +     +   L K 
Sbjct: 70  MDKVAKRTAEQVKNAKVEEVTDANGLKAVKVTF---DSGILFATNKATLNQSSKNELAKF 126

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +VL  + +  + I GHTD +        N  LS  RA S    L   GV   +  K+ G
Sbjct: 127 SQVLKENRDCHVDIYGHTDNT---GNDGINIPLSNSRAQSVVNYLANCGVPRSQFQKVEG 183

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342
                   ++        NRR+++ +   +
Sbjct: 184 KGSSDPVASNSTASGRQQNRRVEVYLYASK 213


>gi|253701505|ref|YP_003022694.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251776355|gb|ACT18936.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 466

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +I  PE    + ++G  +       ++  GHTD          N  LS  RA + 
Sbjct: 235 FDIDKAIIRPEYKEEIAQVGNFMKKYPTTTAVIEGHTDNV---GSYNHNQDLSQRRAEAV 291

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
              L++  G+   R+S   G+   R    +        NRRI+ +++
Sbjct: 292 VNHLVEQYGIERSRLSA-KGYGFTRPIADNATDEGKQKNRRIEAIID 337



 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 78/260 (30%), Gaps = 12/260 (4%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
            P                  K  + L+      K   +           +   ++   + 
Sbjct: 206 TPAPEPPLEVPAAEPTPDHYKYCITLQGEFDIDKAIIRPEYKEEIAQVGNFMKKYPTTTA 265

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
             +         + + + S  + E      + +  I   +   +     + I+   +   
Sbjct: 266 VIEGHTDNVGSYNHNQDLSQRRAEAVVNHLVEQYGIERSRLSAKGYGFTRPIADNATDEG 325

Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHST 263
                +          +  ++  D+    +   FD   +    +    + K+ + +    
Sbjct: 326 KQKNRRIEAIIDCAFDVQQVTPPDRLCMSLVLDFDPGKAEVKQQYRNEIAKVADYMKRYN 385

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
              ++  GHTD +        N +LS  RA +    L+ + G+   R+S   G+   R  
Sbjct: 386 TTTAVIEGHTDNT---GSPEKNMKLSQQRAQNVVNHLVDNFGIERSRLSA-KGYGATRRI 441

Query: 322 IASDP--MNSANRRIDILVE 339
             ++       NRRI+ +++
Sbjct: 442 SYNNTPEGRQKNRRINAVID 461


>gi|119773835|ref|YP_926575.1| outer membrane protein and related peptidoglycan-associated
           (LipO)protein [Shewanella amazonensis SB2B]
 gi|119766335|gb|ABL98905.1| outer membrane protein and related peptidoglycan-associated
           (LipO)protein [Shewanella amazonensis SB2B]
          Length = 484

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 8/146 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     ++   G+        I  +     +  +FD  S   LPE+  VL+ +   L 
Sbjct: 342 KIIEATGLNDNRVGIDLNALTDAITQTGKATLDGLLFDYDSDRMLPESKPVLEVLASYLK 401

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318
            +      + GHTD          N  LS  RA +  + L     +   ++    G    
Sbjct: 402 QNPALNFYVVGHTDDQ---GDKAYNLSLSERRAAAVVKALGADYQIKPAQLEA-HGMGEF 457

Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342
               ++        NRR+++++    
Sbjct: 458 SPVASNANEAGQSQNRRVELVLRSDN 483


>gi|95929277|ref|ZP_01312021.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95134775|gb|EAT16430.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 217

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271
           +GV  +     + ++         FD  S          + ++  +L    +    + GH
Sbjct: 93  EGVKIDRDGNILYVTFRSDNQ---FDVGSFTLRAGAQQDVARLAAILTEYHKTTILVAGH 149

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD++        N  LS  RA +   +L+ SGV   RI+ + GF        +       
Sbjct: 150 TDST---GSEEYNLGLSERRAMAVRNILVASGVISTRITTV-GFGESAPIADNSTEYGRQ 205

Query: 330 ANRRIDILVE 339
            NRR+ + + 
Sbjct: 206 LNRRVALKIT 215


>gi|323697841|ref|ZP_08109753.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323457773|gb|EGB13638.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 254

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 81/244 (33%), Gaps = 9/244 (3%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
                     L             L      L +  Q    K      S KG    K   
Sbjct: 12  PPEDPPGDEGLPPWMATFADMVTLLLCFFVLLLSFAQQSEEKFRDALGSLKGAFGVKEVR 71

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
                  + N       +        ++ L  +  +I S +  L  + + +G      R 
Sbjct: 72  AVSDEMAQFNTSSEATKEMASSISHDQRLLLSVVMRIKSMVENL-DNKLKEGAGVNADRD 130

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282
           G++       +  +F   ++   P+   +L  + +VL      + +RGHTD  P      
Sbjct: 131 GVVFR---TSSAALFQPFTAELRPDATQILDGVIKVLKDYKLNLVVRGHTDDRPIHTAKY 187

Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
             NW LS  RA  A   ++ K G+  +R   + G+A  R ++ +D       N+R++  +
Sbjct: 188 PSNWELSAARAAVALDYIVNKGGIEINRAKAV-GYADTRPEVPNDTEADRLRNQRVEFYI 246

Query: 339 EDRQ 342
              Q
Sbjct: 247 HMPQ 250



 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 13/33 (39%)

Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTV 43
            + +I +K          L  W   +AD +T+
Sbjct: 3  KVEEVIRRKPPEDPPGDEGLPPWMATFADMVTL 35


>gi|325281257|ref|YP_004253799.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324313066|gb|ADY33619.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 276

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 76/184 (41%), Gaps = 12/184 (6%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---KGVLFE 218
             ++ +N      +  L++ +    K +  +     ++ S L+ +    +      +   
Sbjct: 84  SEQEKLNMLLKEKMEKLAEREATINKLQAEVDAQNARLQSLLNSVKDALLGFSSDELTVT 143

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
                I +++ D+    +F+  S+    +    L K+ EVL    ++   I GHTD  P 
Sbjct: 144 EKNGKIYVAMSDKL---LFESGSAQVNKQGKEALGKLAEVLKKQHDIDVFIEGHTDNKPI 200

Query: 278 RN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
           +    +DNW LS+ RA S  ++L K  GV+  +I    G         ++ +     NRR
Sbjct: 201 KTVQFKDNWDLSVVRATSVVRILTKDYGVNPLQILPC-GRGEFMPVDNNESVEGRAHNRR 259

Query: 334 IDIL 337
            +I+
Sbjct: 260 TEII 263


>gi|330447262|ref|ZP_08310912.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491453|dbj|GAA05409.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 223

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    +      +  L  +  
Sbjct: 83  YMDVQEAKLRQQLASSGISVTRDGNNIILNM---PNEITFGFDQANLNDRAMNALHNVAL 139

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G TD+   +  A  N RLS  RA +    L++ GV+ +R+    G  
Sbjct: 140 VAKEYPKTQLNVLGFTDS---KGAASYNLRLSQVRADAVGNYLIRQGVNANRVIS-QGRG 195

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
                 ++      + NRR++I++
Sbjct: 196 EANPIASNSTENGRAQNRRVEIIL 219


>gi|307825940|ref|ZP_07656155.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307733059|gb|EFO03921.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 288

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   F   S+   P+    L  + +VL    +  I++ GHTD          N  LS  
Sbjct: 107 PSNVTFAFDSATLTPQAQGALDSVAKVLNQYPDSTINVTGHTDDV---GSDSYNQVLSER 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
           RA S    L + GV+  R+++  G      K+   ++     NRR+++ +   +
Sbjct: 164 RAASVSSYLAQHGVTPSRLTQ-QGMGEKMPKVPNVNEANRGQNRRVELAIVANK 216


>gi|304383212|ref|ZP_07365685.1| OmpA family protein [Prevotella marshii DSM 16973]
 gi|304335683|gb|EFM01940.1| OmpA family protein [Prevotella marshii DSM 16973]
          Length = 278

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 83/238 (34%), Gaps = 9/238 (3%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            + + K+ S  Q  + Q   +     S   +    K               + +      
Sbjct: 30  QAENKKLTSEYQSTKEQLAASQARVTSLEDRLAQQKRDYAALQNSLDKSLNNANSNNINI 89

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            +    +   ++     ++ K +   L   +++ L+  ++   +K V  +  +  + IS+
Sbjct: 90  SKLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEEMKEVDVQVLKGVVYISL 149

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWR 286
            D     ++   S          L KI +++    +    I G+TD  P      R+NW 
Sbjct: 150 ADNM---LYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVPISRENIRNNWD 206

Query: 287 LSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS  RA S  Q L  + GV   R++   G   +     +        NRR  I++  +
Sbjct: 207 LSCLRASSVVQYLQTRYGVDPKRMTAG-GRGEYNPLSDNSTALGKQRNRRTQIIITPK 263


>gi|221209294|ref|ZP_03582275.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221169982|gb|EEE02448.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 220

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       +   +S+ G+TD+         N  LS  R
Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSV---GSDASNLALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L + G++  R   ++G         +        NRR++I ++ 
Sbjct: 171 AEAVAAYLQQRGLNA-RTLTVTGRGSADPIATNATAEGRATNRRVEISLQR 220


>gi|301047095|ref|ZP_07194195.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|300300982|gb|EFJ57367.1| OmpA family protein [Escherichia coli MS 185-1]
          Length = 219

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANPLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALIPQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|283786435|ref|YP_003366300.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
 gi|282949889|emb|CBG89514.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
          Length = 451

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLD 290
           +   +F   S    PE + V+++I   +      + I GHTDA+P       +N  LS  
Sbjct: 341 KGDALFLSGSVRVQPEMVKVIERIASEVQRVNGDVLIVGHTDATPISRPGLPNNVALSEK 400

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA    Q  + +G+ E ++  + G    +           + NRR++  V 
Sbjct: 401 RAAEVAQYFIAAGLPESKVK-VRGVGSSQPVANEATAQGRAKNRRVEFFVT 450


>gi|255013439|ref|ZP_05285565.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_7]
          Length = 213

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  +SS     +   L+     L  + +  I I G TD +        N  LS  
Sbjct: 92  DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 148

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S Y  LM  GVS DR+    G   H    ++D       NRR++I++   Q
Sbjct: 149 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 201


>gi|170697917|ref|ZP_02889001.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170137192|gb|EDT05436.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 587

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   +     T   +    E++         + G+ D          N +LS+D
Sbjct: 466 DSMSLFDSGKARLRTGTTRAMVDALELIKAHPGKRVLVAGYADDQ---GRPDRNLKLSID 522

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +    L+++ G+   R   I G+   R    +      + NRR++I +   
Sbjct: 523 RASAVRDWLIEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 575


>gi|110677964|ref|YP_680971.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh
           114]
 gi|109454080|gb|ABG30285.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh
           114]
          Length = 279

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 125/332 (37%), Gaps = 57/332 (17%)

Query: 9   QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
           Q N   +IIKKK  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +      
Sbjct: 4   QSNLAPVIIKKKKKVVGGGHHGGAWKVAYADFVTAMMAFFMMMWLLNATTEQQR------ 57

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                       +G+ D   P                                       
Sbjct: 58  ------------QGLADYFAP-----------------------------------TIPI 70

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           N I    +         S     + G          K     E+       +      + 
Sbjct: 71  NRISGGGDGAFGGDSIFSEETLPQNGLGATSQHATRKQAASGESGNDDDGGERDTSDEEL 130

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +  +++L   +       V +N ++ ++   T  G++I +      P+F+ +S +P P  
Sbjct: 131 QALVEEL---MGRGGESTVMENALEHIVTRITDEGLVIELFALDGLPLFEPNSDVPTPLM 187

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +++ +  V   +T  I+I  H  + P        W  S DRA     +L ++G+  +R
Sbjct: 188 TQLVELVASVAFAATNDIAIGAHVPSRPIVVAQNPVWDASTDRATRTRLMLQENGLEPER 247

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           + +++G A       + PM + N R++I++  
Sbjct: 248 MQRVTGHADREPAHLN-PMATRNSRVEIVLLR 278


>gi|21230892|ref|NP_636809.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769109|ref|YP_243871.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992257|ref|YP_001904267.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112502|gb|AAM40733.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574441|gb|AAY49851.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734017|emb|CAP52223.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris]
          Length = 241

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 12/156 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   P+    L
Sbjct: 85  AAVGQYQDRQERALRERTANTGIDVQRQGDNITLNLPDGIT---FDFGKSALKPQFYTAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERANAVAQYLTAQGVQRERMET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV--EDRQG 343
           + G         +      + NRR++I +    ++G
Sbjct: 199 M-GAGKRYPIADNSTDAGRAQNRRVEIRLIPLRQEG 233


>gi|167561951|ref|ZP_02354867.1| ompA family protein [Burkholderia oklahomensis EO147]
 gi|167569201|ref|ZP_02362075.1| ompA family protein [Burkholderia oklahomensis C6786]
          Length = 215

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAVTPAFTPLLNDLASTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    + + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNAMSQRGVAASRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|332666433|ref|YP_004449221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335247|gb|AEE52348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 958

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                +F   S   LPE    L +  + +  +   I I+GHTD +   +    N  LS +
Sbjct: 851 SIRDVLFATGSYEILPEAHTYLIQWAKFIQRNKLKIEIQGHTDNT---SSTEFNQVLSEN 907

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
           RA +  Q L+++    + +S   GF   + + ++      + NRR+
Sbjct: 908 RAQAVRQFLIENNCIAENLST-RGFGESKPEASNATEEGRAKNRRV 952


>gi|317153907|ref|YP_004121955.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944158|gb|ADU63209.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 380

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNI 280
           +   +        FD       PE+  +L  +GE L         I + GHTD+      
Sbjct: 262 LRPQVNGVNLDIQFDFDKDTIRPESYPLLDALGEALNTQQLKGRSIIVGGHTDSR---GD 318

Query: 281 ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              N  LS  RA +    L+   GV++D I  + GF   R   A     +   NRR++I 
Sbjct: 319 DAYNLALSKRRANAVKAYLVNKWGVAQDLIEAV-GFGKTRPIAAGSTTEAMRKNRRVEIR 377

Query: 338 V 338
           +
Sbjct: 378 L 378


>gi|255531842|ref|YP_003092214.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255344826|gb|ACU04152.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 445

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   +    ++   L K+  +L      + + GHTD +        N RLS +RA +  
Sbjct: 345 FDLGKATIRAKSYATLNKVAALLIEKNFSLKLAGHTDNT---GSMALNLRLSKERAEAIK 401

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             L+  G +  RI   +G+  ++   ++        NRR++  +
Sbjct: 402 AYLVSQGANASRIEA-TGYGPNQPIASNKTAEGRQKNRRVEFTL 444


>gi|237728863|ref|ZP_04559344.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
 gi|226909485|gb|EEH95403.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
          Length = 220

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLREKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSANLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G TD++        N RLS  RA S    L+  GV+ +RI +  G  
Sbjct: 137 VLKEYNKTAVNVLGFTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTQGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216


>gi|146282405|ref|YP_001172558.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
 gi|145570610|gb|ABP79716.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
          Length = 315

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    E+   ++ + + +    +  ++  GHTD+       + N RLS  RA + 
Sbjct: 209 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 265

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             VL+ + GV  +R++ + G+   R    +        NRR++  VE 
Sbjct: 266 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVEAEVEA 312


>gi|146300670|ref|YP_001195261.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146155088|gb|ABQ05942.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 277

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271
             +     +  + ISI D+    +F   S     +   VL K+ +V+    +    + GH
Sbjct: 130 PDIEVNVEKGVVFISIADKL---LFKSGSYDVSDKAKSVLAKVAKVVNDKPDFECMVEGH 186

Query: 272 TDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328
           TD  P+++     DNW LS+ R+ S  +VL    GV+  ++    G + +   +A+D   
Sbjct: 187 TDDVPYKSNGVILDNWDLSVKRSTSIVRVLTNDLGVNPAKLIAA-GRSSYVPLVANDSAE 245

Query: 329 --SANRRIDILVEDR 341
             + NRR  I+V  +
Sbjct: 246 NKARNRRTRIVVMPK 260


>gi|229098968|ref|ZP_04229903.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
 gi|229117997|ref|ZP_04247357.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
 gi|228665446|gb|EEL20928.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
 gi|228684466|gb|EEL38409.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
          Length = 233

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q      S        K+        +      N       K+   A  +++ + +L  
Sbjct: 24  KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSANSLESEQIKKNAEAEVKQQEMNELKA 83

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +    +      + T  G++++I++     +FD   +    E++ + +++  
Sbjct: 84  VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140

Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314
           +L + S   I++ GHTD  P  N     NW LS  RA +  Q +L    +   + S I G
Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPGKFSAI-G 199

Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339
           +  +R    +D     + NRR+++ + 
Sbjct: 200 YGEYRSIAQNDTPEGKAKNRRVEVFIL 226



 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F        T +K    +Q P E    +   
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPNEEKELSANS 59

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
           L  ++       ++K    N+ K  Q+  +  
Sbjct: 60  LESEQIKKNAEAEVKQQEMNELKAVQKGIDKY 91


>gi|167893289|ref|ZP_02480691.1| ompA family protein [Burkholderia pseudomallei 7894]
          Length = 171

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 59  PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 115

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 116 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 168


>gi|167844755|ref|ZP_02470263.1| ompA family protein [Burkholderia pseudomallei B7210]
          Length = 163

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 51  PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 107

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+ +R+S   G         +      + NRR++I +   Q
Sbjct: 108 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 160


>gi|59713771|ref|YP_206546.1| OmpA family domain-containing protein [Vibrio fischeri ES114]
 gi|197337822|ref|YP_002158145.1| OmpA family protein [Vibrio fischeri MJ11]
 gi|59482019|gb|AAW87658.1| OmpA family domain protein [Vibrio fischeri ES114]
 gi|197315074|gb|ACH64523.1| OmpA family protein [Vibrio fischeri MJ11]
          Length = 184

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 13/167 (7%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              S +++  +     +       +  L   V ++I        T   I+I +   +   
Sbjct: 19  QSTSDDEMADIAETPTVASFVDYHNEQLQQFVTEDIG---SVAQTNEEIIILLNGDK--- 72

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD  S     E+ +VL ++ ++L    E  + I GHTD+       + N  LS  RA S
Sbjct: 73  SFDSGSIEIKNESKLVLSQLAKLLNDKPESEVFIAGHTDSR---GSKKFNMSLSNQRADS 129

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
              +L ++GV  +RI+   GF          +      NRRI+I + 
Sbjct: 130 VLALLEENGVDGNRINTY-GFGESEPIATNINAEGRKKNRRIEIRIT 175


>gi|254524462|ref|ZP_05136517.1| outer membrane protein [Stenotrophomonas sp. SKA14]
 gi|219722053|gb|EED40578.1| outer membrane protein [Stenotrophomonas sp. SKA14]
          Length = 231

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I++++ D      FD   +   P+    L
Sbjct: 85  AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKATLKPQFYGSL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + +I + GHTD+         N RLS +RA S  Q L+  GV   RI  
Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLIGQGVQSVRIET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         +      + NRR++I V
Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226


>gi|190573806|ref|YP_001971651.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
           K279a]
 gi|190011728|emb|CAQ45347.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
           K279a]
          Length = 231

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I++++ D      FD   S   P+    L
Sbjct: 85  AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKSTLKPQFYGAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + +I + GHTD+         N RLS +RA S  Q L+  GV   RI  
Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLIGQGVQSVRIET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         +      + NRR++I V
Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226


>gi|119900180|ref|YP_935393.1| hypothetical protein azo3891 [Azoarcus sp. BH72]
 gi|119672593|emb|CAL96507.1| putative outer membrane protein [Azoarcus sp. BH72]
          Length = 434

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +  ++   L+  + + +   V         ++ I   +   +F+ +S+   P  + ++ 
Sbjct: 289 KVPDRLQGFLAPEIREGL---VTVRDLPDRSVVQI---QGDGLFEPASATLAPRVLPLMA 342

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +IGE +A     + +RGH+D  P R+     NW LS  RA S   VL    +   RI   
Sbjct: 343 RIGEAVARVKGSVLVRGHSDDRPIRSARFPSNWHLSQARADSVAAVLAPQ-LGGARIET- 400

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338
            G A      ++D     + NRR++I+V
Sbjct: 401 EGRAESEPVASNDTPEGRARNRRVEIIV 428


>gi|119899491|ref|YP_934704.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
           sp. BH72]
 gi|119671904|emb|CAL95818.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
           sp. BH72]
          Length = 193

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N+       P + EK  A   K     L K++S  L G+    +            + 
Sbjct: 27  DANRPSEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVG---EATADGIHLR 83

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
           I + +      F    S P P    VL  +   LA    V I + GHTD          N
Sbjct: 84  IPVSNG-----FASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGL---GSEMYN 135

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
            +LS+ RA +  + L   G++ DR+S   G         +  +   + NRR++I++  
Sbjct: 136 LKLSIQRAEAVMEYLRSRGIAFDRLSA-DGKGETEPIADNAKEATRARNRRVEIVLRA 192


>gi|26249224|ref|NP_755264.1| hypothetical protein c3389 [Escherichia coli CFT073]
 gi|227888360|ref|ZP_04006165.1| OmpA family membrane protein [Escherichia coli 83972]
 gi|301049415|ref|ZP_07196377.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|26109631|gb|AAN81834.1|AE016765_236 Hypothetical protein c3389 [Escherichia coli CFT073]
 gi|227834629|gb|EEJ45095.1| OmpA family membrane protein [Escherichia coli 83972]
 gi|300298792|gb|EFJ55177.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|307554790|gb|ADN47565.1| OmpA family protein [Escherichia coli ABU 83972]
          Length = 550

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|229186744|ref|ZP_04313902.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
 gi|228596757|gb|EEK54419.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
          Length = 234

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             T + E   D   + + E S +  E        + +    K    L+ L KKI   ++ 
Sbjct: 36  GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                +      + T  G++++I++     +FD   +    E++ + +++  +L + S  
Sbjct: 96  ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149

Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322
            I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++ S I G+  +R   
Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208

Query: 323 ASDPMN--SANRRIDILVE 339
            +D     + NRR+++ + 
Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227


>gi|194336698|ref|YP_002018492.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309175|gb|ACF43875.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 229

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D+ V+G   E    GI +      +  +F   S+     +   ++K+  +L    
Sbjct: 82  QAAEIDHDVEGARVERVGEGIRVIF---DSGILFSTGSATITSTSRYNIEKLARILNRYN 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           E   +  GHTD+         N  LS  RA S   +L    VS  R+S I G+   R   
Sbjct: 139 ETSLVIEGHTDSI---GSDDANQSLSERRADSVANLLEAYRVSGRRLSPI-GYGETRPVS 194

Query: 323 ASDPMNSA--NRRIDILV 338
           +++       NRR+++L+
Sbjct: 195 SNETEYGRKLNRRVEVLI 212


>gi|315298823|gb|EFU58077.1| OmpA family protein [Escherichia coli MS 16-3]
          Length = 550

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|300980597|ref|ZP_07175094.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|300409214|gb|EFJ92752.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|315293784|gb|EFU53136.1| OmpA family protein [Escherichia coli MS 153-1]
          Length = 550

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|296271644|ref|YP_003654275.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296095819|gb|ADG91769.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 271

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 98/244 (40%), Gaps = 10/244 (4%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
              +         + +   +   +++     +        +  +          E  K +
Sbjct: 32  GTTTFYTPSISQKIIIPEKTVPIQEEIVEGPSEKVVPPIIEDQKDDAVIDENTDEDQKKI 91

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
                 +             +   K + +   K++++L+ KI       + D+ ++  + 
Sbjct: 92  DDIEKPDIENADIIVDDKKEVDNTKKVVIPEDKKIEELSHKIQ---PKNIQDDTIESKMD 148

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
           +  +T   I+ +  ++   F +  +    E+  V+++I ++L ++    I I GHTDA  
Sbjct: 149 KNKKTQDEINAVISKDHIFFKRLGTDITDESYKVVEQIAKILKNNPSVKIEIGGHTDA-- 206

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
            +  A  N  +SL RA S  + L K G++EDRI+ + G+   +  + +D    +S NRR+
Sbjct: 207 -KGEADVNQWISLQRAKSVKKELEKLGIAEDRITAV-GYGESQPLVPNDKNGYSSENRRV 264

Query: 335 DILV 338
           +  +
Sbjct: 265 EFKI 268


>gi|289670151|ref|ZP_06491226.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 241

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   PE    L
Sbjct: 85  AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         ++     + NRR++I +
Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226


>gi|289662480|ref|ZP_06484061.1| hypothetical protein XcampvN_05177 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289669716|ref|ZP_06490791.1| hypothetical protein XcampmN_14767 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 224

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      + +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     + + L    E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|229593379|ref|YP_002875498.1| hypothetical protein PFLU6014 [Pseudomonas fluorescens SBW25]
 gi|229365245|emb|CAY53556.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 429

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           LV D     V  E      +++I       +F  +SS  + +   ++ +I + +      
Sbjct: 292 LVEDIKAGRVAVEDAVDRSVVTIRGDE---LFASASSSIVDDYQPLMLRIADAIRKVKGQ 348

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW LS  RA S   +L       DR S   G +       +
Sbjct: 349 VRVTGHSDNRPIATLRFPSNWALSEARAKSVLDILAAKTGQADRFSA-EGRSDTEPVATN 407

Query: 325 DPM--NSANRRIDILVED 340
                 + NRR++I V  
Sbjct: 408 ATAEGRARNRRVEITVLA 425


>gi|222034509|emb|CAP77251.1| hypothetical protein LF82_430 [Escherichia coli LF82]
 gi|312947346|gb|ADR28173.1| hypothetical protein NRG857_13805 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 550

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|149278789|ref|ZP_01884924.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
 gi|149230408|gb|EDM35792.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
          Length = 175

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 8/162 (4%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A K +K  +      +   +    DN+ K +                 +  +F  +SSI 
Sbjct: 18  ACKTQKIAKSTTPPATEVAADQELDNLKKNLPDNQIARTNEGIKFTFSSEVLFPTNSSIL 77

Query: 245 LPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              +   L ++ +V++       + I GH+D +     A  N  LS  RA S    L+  
Sbjct: 78  NEASKKKLAEVAKVISEQKPAPAVLIEGHSDKT---GTAPYNQWLSEKRAVSVKTYLVSL 134

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           G++  +I + +G    +    +        NRR++I +    
Sbjct: 135 GIAASKI-RTAGQGDTKPVGDNKTKEGRLQNRRVEITLLKSN 175


>gi|119384145|ref|YP_915201.1| hypothetical protein Pden_1404 [Paracoccus denitrificans PD1222]
 gi|119373912|gb|ABL69505.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 463

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 16/249 (6%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           + +  +  +   + + ++     N      NSQ             E+ +   ++ DL +
Sbjct: 218 LARQQLSEQEALSVEDRRRLAALNQQVAQLNSQLGSLRAVLDAAGEERREADLRAEDLGR 277

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            +N           K + L  + + + +  AK ++   S          +L       ++
Sbjct: 278 QLNVALLRAAEEERKRRALEEEARSKAEAEAKDLARYRSEFFGRLSQ--ILAGREGVRVV 335

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF 277
                  +  +F    +   PE    + ++ ++L             +I + GHTD  P 
Sbjct: 336 GDRFVFSSEVLFAPGEATLSPEGRTQVARVADMLKQISGDIPPEIDWMIRVDGHTDNLPL 395

Query: 278 RN--IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANR 332
                 RDNW LS  RA +  + ++   G    R+   +GFA  R     D     + NR
Sbjct: 396 SGQGRYRDNWELSQARALAVVRYMVDDLGFPATRL-APAGFADTRPVAQGDAPEARAQNR 454

Query: 333 RIDILVEDR 341
           RI++ + +R
Sbjct: 455 RIELKLTER 463


>gi|296536082|ref|ZP_06898216.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
 gi|296263579|gb|EFH10070.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
          Length = 235

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 15/224 (6%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                 + +   +++  + +   + + +       I             ++    +  +R
Sbjct: 13  AEAEGGEHARLAESARAQVALLTQQVTQLRAELSRIAALLEAEEQSGRDKEAQISQLGQR 72

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249
           L          L    +D   +       R  + I       +   +F    +       
Sbjct: 73  LNAALAARVEELQRYRSDFFGRLRDVLGDRPEVRIVGDRFVFQGEVLFPVGGAELSAAGQ 132

Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVL 299
             L+ + +VL             ++ + GH D SP         NW LS  RA +  Q L
Sbjct: 133 QQLRALAQVLLEVTRRFPQDLAWILRVDGHADRSPLRAGARYASNWELSAARAIAVGQFL 192

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +  G+  +R+   + F  ++   + D     + NRRI++ + DR
Sbjct: 193 IGEGLPPNRV-AATAFGEYQPIDSGDSPEAFARNRRIELRLTDR 235


>gi|269792934|ref|YP_003317838.1| OmpA/MotB domain-containing protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100569|gb|ACZ19556.1| OmpA/MotB domain protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 241

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 9/180 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTG 223
                 +        K    A    KR Q+  + I+  L  L   + +   +     + G
Sbjct: 61  PGGKTIQEDAGVYQGKVGQDAGDSIKRTQEFKEGIARQLQALAKEEGLQSQMKVHVDQRG 120

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282
           + +S+ +Q    +F   S+   P    VL K+G+VL      +S  GHTD +P       
Sbjct: 121 VTVSMSEQ---FLFAPGSAELSPFARRVLFKVGQVLRVVRFPLSFEGHTDNTPMEGGLYG 177

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           DNW LS  RA +    ++   G+S+  +  + G+   +  + +D     + NRR+DI++ 
Sbjct: 178 DNWGLSAARAAAVASYMVNRIGLSDKNVQAV-GYGPSKPLVPNDTPEHRAINRRVDIVIL 236



 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 43/141 (30%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K    + P     +   Y D +T+L+ FF+ ++  ++ D    + +   F      L  
Sbjct: 3   RKKKQPEGPTGAPLFMATYGDMVTLLLTFFVFLYSFSSIDVQKFQKMIFSFQGALGVLPG 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                 D      +  Q+  D        K  +  ++ +  +++  Q             
Sbjct: 63  GKTIQEDAGVYQGKVGQDAGDSIKRTQEFKEGIARQLQALAKEEGLQSQMKVHVDQRGVT 122

Query: 139 QSEHCKNSLTRDSEKGKDLCK 159
            S   +      S +     +
Sbjct: 123 VSMSEQFLFAPGSAELSPFAR 143


>gi|163782256|ref|ZP_02177254.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882289|gb|EDP75795.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 313

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S++  P +   L++I   L  + +  + + GHTD +        N +LSL RA + 
Sbjct: 211 FDHGSAVIKPGSEKTLKEIARYLKMNPKARLYVVGHTDGT---GSYDYNLKLSLKRAEAV 267

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            + L+K  G+S  R+  + G         +      + NRR++++
Sbjct: 268 VRRLVKEYGISPKRLKAV-GVGPVAPVDTNRTPEGRARNRRVELV 311


>gi|108759418|ref|YP_635012.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463298|gb|ABF88483.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 543

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F     I L E+  +L+++  V+  +T  + + + GHTD+         N  LS  RA S
Sbjct: 399 FATDQDIILSESFPILEEVARVMNENTEADRVHVEGHTDSR---ASDAYNLDLSRRRAAS 455

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             + L++SGV+ +R+    GF   R    +      + NRR+D  ++  
Sbjct: 456 VMRFLVESGVAAERLCS-QGFGRSRPLADNATEEGMALNRRVDFTIQPP 503


>gi|94309565|ref|YP_582775.1| OmpA/MotB [Cupriavidus metallidurans CH34]
 gi|93353417|gb|ABF07506.1| putative OmpA/MotB (family of outer membrane porins precursor)
           [Cupriavidus metallidurans CH34]
          Length = 572

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +F   S++    +  VL    E++    +    + GHTD+      +R N +LS  
Sbjct: 443 DSLSLFKSGSALLNLGSNRVLIGALEMIKAHPDKRVLVAGHTDSV---GDSRANLKLSEA 499

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA S    L  +         I G+   R K  ++P    +ANRR++I +   
Sbjct: 500 RAASVRDWLADAADLPVTRFAIQGYGETRPKAPNEPEAGRAANRRVEITLVPD 552


>gi|78224724|ref|YP_386471.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78195979|gb|ABB33746.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 193

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 8/174 (4%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            ++    P  +   + A +     +  A  +                         L ++
Sbjct: 22  AKKEMVKPEEAVPPVAAPQPTTPAKPAAPPVKEEPIAAQPIPEAPVKTETLQPATALDTV 81

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286
               +   FD  S +       +L K  E L        + I GH D          N  
Sbjct: 82  TATLDRIFFDFDSFVLSQAARDILSKNAEYLLKKQPNARVLIEGHCDER---GSDEYNLA 138

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           L   RA +A   L+  GV+ +R+S IS +   +           + NRR + L+
Sbjct: 139 LGEKRAKAARDYLVTLGVAANRLSIIS-YGEEKPLDPGHTEEAWAKNRRAEFLI 191


>gi|325923199|ref|ZP_08184883.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325546323|gb|EGD17493.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 249

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 12/156 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   P+    L
Sbjct: 93  AAVGQYQDRQERALRERTANTGIEVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSAL 149

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 150 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 206

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV--EDRQG 343
           + G         ++     + NRR++I +     +G
Sbjct: 207 M-GAGKRYPIADNNTDAGRAQNRRVEIRLIPLRSEG 241


>gi|302343737|ref|YP_003808266.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301640350|gb|ADK85672.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 245

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 14/169 (8%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD-----NIVKGVLFETTRTGILISIIDQRNTPM 236
           + L       L    ++++  +           ++ +G+       G +I++    N  +
Sbjct: 77  EQLETATPADLDLAKQELAEMMELPSGQTDLAGSLQQGLQVRQEPRGTVITL---ANDLL 133

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYS 294
           F    +   P+ +  ++KI  VLAH +  IS+ GHTDAS     +   DNW LSL RA++
Sbjct: 134 FAPGKAELSPQAVESIKKIASVLAHGSANISVEGHTDASAPGAGSGFGDNWSLSLARAHA 193

Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
               L+   G+  DR+ +++     R  + +D     + NRR +I+V  
Sbjct: 194 VLLRLIDPGGLKPDRL-RLAALGDSRPLVPNDTPQRRAMNRRTEIVVLA 241



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           KKK  +   P     W   ++D +T+L+ FF+++  +   +    KA    F+  G   +
Sbjct: 4   KKKQEVGFDPLG---WMFTFSDLVTLLLTFFVMLLAMKQPEVLKFKAAFGVFSGGGGAGV 60

Query: 78  TASKGIFDEQN----PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            A       Q       +  +    DL + +      ++L  G T+     Q+
Sbjct: 61  MALTDQPGVQAHRRIMEQLETATPADLDLAKQELAEMMELPSGQTDLAGSLQQ 113


>gi|86130189|ref|ZP_01048789.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818864|gb|EAQ40023.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 236

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 73/207 (35%), Gaps = 17/207 (8%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +   K ++   +          +   S    E   +          +    ++   A++
Sbjct: 30  ANNKQKGAVIGATGGAILGAIIGNNAGSGGNGELGAVIGGVVGGGAGVLIGNKMDKQAQQ 89

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I   + G   + +  G++             D+ +   FD +       +  +L K+  +
Sbjct: 90  IEQEIPGASVERVDDGIVVT----------FDENSGVYFDTAKYNINANSQTMLNKLSNI 139

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +    +  + + GHTD+         N  LS +RA +    ++ +G+S  R + +  +  
Sbjct: 140 MKEYNQTNVIVAGHTDSV---GSDASNLTLSQNRANAVTNYMIGTGLSAGRFTTV-WYGE 195

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            +   ++D     + NRR+ + +   +
Sbjct: 196 AQPAASNDTAEGRAQNRRVQLAIVPNE 222


>gi|85706177|ref|ZP_01037272.1| OmpA domain protein [Roseovarius sp. 217]
 gi|85669341|gb|EAQ24207.1| OmpA domain protein [Roseovarius sp. 217]
          Length = 219

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 10/205 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +      +T ++   K    +                   K  ++             
Sbjct: 19  AAACTEPGYVTGNNTNQKTKQGAILGGIIGAGTGAIVSDDKGKGALIGGILGAAGGATIG 78

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                    +   +   V    T   +++++       +F   S          L K+ +
Sbjct: 79  NALDRQEAELRQQLDNDVQIVNTGDRLILTMPQD---ILFPVDSFTVASVLRDDLLKVAQ 135

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +    + GHTD+      A  N  LS  RA +   VL   GVS  R+    G  
Sbjct: 136 SLQAYPDTTVQVVGHTDSD---GAASYNQSLSERRANAVADVLASGGVSYGRLRAF-GRG 191

Query: 317 HHRLKIASDP--MNSANRRIDILVE 339
             +   ++      + NRR++I++ 
Sbjct: 192 EDQPVASNLTPQGKAQNRRVEIVIL 216


>gi|119357024|ref|YP_911668.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354373|gb|ABL65244.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 369

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQK 254
           I S ++G      +K V        +  S++ +         FD  ++   PE+  V+ +
Sbjct: 226 IGSHITGTKNKGYIKNVRIAAGSVKLYNSLMAKGRIATTGIKFDTGNATLKPESNGVINE 285

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I +++     +   I GHTD+         N  LS  R+ +    L+K G++  R+  IS
Sbjct: 286 IVKMMNTYPVIRLRIEGHTDSD---GDTSANQILSEKRSAAVKAALIKRGIAAVRL-SIS 341

Query: 314 GFAHHRLKIASDPMNSA--NRRIDIL 337
            F   +    +        NRR++ +
Sbjct: 342 SFGETKPVADNTTSEGKANNRRVEFV 367


>gi|78356582|ref|YP_388031.1| motB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78218987|gb|ABB38336.1| motB protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 245

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 8/172 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                 + +++ +K+L +  +K+ S +   +    V+GV+      G++   I      +
Sbjct: 76  SDDAALLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFDEGVI--TIKVPAGVL 133

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAY 293
           F+K+S     + + +L+ + +  L    + I+IRG+TD S     +  RDNW +S  RA 
Sbjct: 134 FEKNSVDISADGLSMLEGLNDFFLKKKDQSINIRGYTDDSVPAAGSRFRDNWEISALRAV 193

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           +  +  +KSG+   R++  +G         +      + NRR++ ++E R G
Sbjct: 194 NVLRFFLKSGIEPGRLTA-TGLGDLDPLFPNTSEENRAKNRRVEFVLERRVG 244


>gi|317046265|ref|YP_004113913.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
 gi|316947882|gb|ADU67357.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
          Length = 220

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSSSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV  +R+ +  G  
Sbjct: 137 VLKEYPKTAVNVTGYTDST---GTRALNMRLSQQRAESVASALIVQGVEANRL-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILVE 339
                 ++      + NRR++I + 
Sbjct: 193 PDNPVASNSTEAGKAQNRRVEITLT 217


>gi|149925042|ref|ZP_01913359.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
           SIR-1]
 gi|149814084|gb|EDM73711.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
           SIR-1]
          Length = 233

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
               +F+   +    E+  ++ +I +V       + +S+ GHTD+      +R N +LS 
Sbjct: 69  NEKILFEVDKAEIRSESFSLMDEITKVFIDNPRIKKVSVEGHTDSD---GSSRYNKKLSQ 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
            RA S    L++ GV+++R+  + G    +    +D       NRR++ ++ +
Sbjct: 126 KRADSVMAYLVEHGVAQERLEAV-GHGEEKPIADNDTDEGKEKNRRVEFIILE 177


>gi|293603504|ref|ZP_06685926.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
 gi|292818090|gb|EFF77149.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
          Length = 210

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I    +   FD   +   P  + VL  +   L    E    + GHTD+
Sbjct: 87  VVEMPDGSLKVNI---PSGVSFDTDKTQLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 143

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N  LS++RA S    L K GV+  R+  I G         +        NR
Sbjct: 144 T---GALAHNQTLSVNRARSVTDYLAKQGVAATRL-AIEGRGPSDPIGDNATAEGRALNR 199

Query: 333 RIDILV 338
           R++I +
Sbjct: 200 RVEIYL 205


>gi|83814826|ref|YP_444492.1| OmpA family protein [Salinibacter ruber DSM 13855]
 gi|83756220|gb|ABC44333.1| OmpA family protein [Salinibacter ruber DSM 13855]
          Length = 230

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D  +     E    GI ++     +  +FD  SS    E    L +  E +    
Sbjct: 80  KAEELDEELDNADVERVGEGIKVTF---DSGILFDFDSSTLRAEARQNLTEFAESMQGFE 136

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    + GHTDA         N +LS  RA SA + L+  GV   R++ + G        
Sbjct: 137 DTKILVVGHTDAQ---GSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRGETEPVA 192

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           +++       NRR+++ +   +
Sbjct: 193 SNETEEGRQQNRRVEVAIYANE 214


>gi|83941363|ref|ZP_00953825.1| flagellar motor protein [Sulfitobacter sp. EE-36]
 gi|83847183|gb|EAP85058.1| flagellar motor protein [Sulfitobacter sp. EE-36]
          Length = 582

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 16/250 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              ++ +  +  +T   ++   L N        Q  E         +       +   L 
Sbjct: 336 DAARSELAQEEAATAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAAKEVQLQSLG 395

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             +N           +   L    + RL+   K +    S        + +L       I
Sbjct: 396 SDLNTALARVAAEERRRAKLEAAERARLEAETKNLEQYRSEFFGRL--RALLGNQEGVRI 453

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP 276
                   +  +F   ++    +    + K+  +L             VI + GHTD  P
Sbjct: 454 EGDRFVFSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQP 513

Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
                   DNW LS  RA S  + ++   G++ +R+   +GF  ++     +     + N
Sbjct: 514 LSGLGEFADNWELSQARALSVVKYMINFLGIAPERL-AANGFGQYQPVARGNTEAARAQN 572

Query: 332 RRIDILVEDR 341
           RRI++ + +R
Sbjct: 573 RRIELKLTER 582


>gi|57169060|ref|ZP_00368187.1| fibronectin-binding protein [Campylobacter coli RM2228]
 gi|57019518|gb|EAL56209.1| fibronectin-binding protein [Campylobacter coli RM2228]
          Length = 332

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 229 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 285

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            + L K GV + RI  + G+   + + +++       NRR+D
Sbjct: 286 AKELEKFGVDKSRIQTV-GYGQDKPRSSNETKEGRADNRRVD 326


>gi|170722410|ref|YP_001750098.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169760413|gb|ACA73729.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 383

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S    P +  +L      +      + +  GH DA      A  N  LS  RA +
Sbjct: 263 LFDPGSDELKPGSTKLLVNALVGIKAQPGWLIVISGHADAR---GDAAKNLDLSRARASA 319

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
               + + G   D    + G A  +   ++D     + NRR+DI +   QG
Sbjct: 320 VRDWMQRMGDIPDSCFAVQGVAASQPVSSNDTVNGRAENRRVDIRLV-PQG 369


>gi|83720098|ref|YP_441413.1| ompA family protein [Burkholderia thailandensis E264]
 gi|83653923|gb|ABC37986.1| ompA family protein [Burkholderia thailandensis E264]
          Length = 261

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 149 PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 205

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 206 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 258


>gi|538830|pir||F40590 motB homolog lafU - Vibrio parahaemolyticus (fragment)
          Length = 202

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 78/255 (30%), Gaps = 58/255 (22%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q      S + IDL+ D  +        + S+  +      E N
Sbjct: 63  SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                     E                                                 
Sbjct: 117 SLVPGTFDTQE------------------------------------------------- 127

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L  LAK I    + +   N    V    T  G+ I + D     MF +  +   P    
Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184

Query: 251 VLQKIGEVLAHSTEV 265
           +L  +  +    T  
Sbjct: 185 LLLALAPLFEQVTNP 199


>gi|264680876|ref|YP_003280786.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|299531878|ref|ZP_07045278.1| OmpA/MotB [Comamonas testosteroni S44]
 gi|262211392|gb|ACY35490.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|298720053|gb|EFI61010.1| OmpA/MotB [Comamonas testosteroni S44]
          Length = 219

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   +        +L +  E L ++    + I GHTD++        N  LS
Sbjct: 106 DIPSDISFDTGRADIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 162

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           L RA S    L   GV+  RI ++ G   H+   ++      + NRR++I V +R
Sbjct: 163 LQRAESTRNYLTSRGVNGARI-QVQGMGSHQPVASNATNEGRARNRRVEIFVGER 216


>gi|134296618|ref|YP_001120353.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134139775|gb|ABO55518.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 213

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  SI G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 212


>gi|146308664|ref|YP_001189129.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145576865|gb|ABP86397.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 218

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
                F  +S+         L  +  V    +   ++I GHTD++        N  LS  
Sbjct: 110 PGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDST---GSQELNQSLSSR 166

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           RA S    L  +GV   RIS   G    +   ++      + NRR++I + 
Sbjct: 167 RAQSVANYLTANGVPGQRISAY-GAGPSQPIASNATDAGRAQNRRVEINLR 216


>gi|308188742|ref|YP_003932873.1| OOP family outer membrane lipoprotein yiaD precursor [Pantoea
           vagans C9-1]
 gi|308059252|gb|ADO11424.1| Putative OOP family outer membrane lipoprotein yiaD precursor
           [Pantoea vagans C9-1]
          Length = 220

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRNGDNIVLNM---PNNVTFDSSSSNLKPAGANTLTGVSM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ DR+ +  G  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSRALNMRLSQQRAESVASALIVQGVASDRL-RTQGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PDNPVATNSTEAGKAQNRRVEITL 216


>gi|114769425|ref|ZP_01447051.1| flagellar motor protein [alpha proteobacterium HTCC2255]
 gi|114550342|gb|EAU53223.1| flagellar motor protein [alpha proteobacterium HTCC2255]
          Length = 638

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 21/221 (9%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK--- 197
           +  K + ++   + K L  + +L  +    E   L    ++     ++    +   K   
Sbjct: 419 DESKEADSKAQIQLKMLGTNLNLALARVASEQRKLAAEQEKVAAEQRKIAEFESKEKLRL 478

Query: 198 -KISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254
              +  L    ++   K       + G+ I        +  +F   S+         + K
Sbjct: 479 ADEAKDLKKFRSEFFGKLREVMEGKEGVRIVGDRFVFSSEVLFSVGSAYLGSRGKTEISK 538

Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQVLM-KS 302
           + +++             ++ + GHTD  PF       +DNW LS  RA S  + LM   
Sbjct: 539 VADIINQIADEIPTGIDWILRVDGHTDRIPFSGFGNDYKDNWELSQARALSVVRYLMDDL 598

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            +  +R+   +GF   +     D   +   NRRI++   ++
Sbjct: 599 DIPANRL-AANGFGEFQPIDNRDTPEAYKTNRRIELKFTEK 638


>gi|237654130|ref|YP_002890444.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|237625377|gb|ACR02067.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 222

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D      FD       P    VL ++   L       ++I GHTD++        N  LS
Sbjct: 109 DIPADVSFDVGRHAIKPNMRPVLDRLASTLNQHPVTTVTIIGHTDST---GSDAVNDPLS 165

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           ++RA +    L++ GVS  RI  + G    +    +      + NRR++I +
Sbjct: 166 INRAAATRDYLVQRGVSAQRI-AVDGRGSRQPVADNSTASGRAMNRRVEIFI 216


>gi|254482517|ref|ZP_05095756.1| peptidoglycan-associated lipoprotein, putative [marine gamma
           proteobacterium HTCC2148]
 gi|214037208|gb|EEB77876.1| peptidoglycan-associated lipoprotein, putative [marine gamma
           proteobacterium HTCC2148]
          Length = 174

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283
           +  +     N   FD  S    P+ +  L      +  +   + + GHTD          
Sbjct: 63  LRDAAAAYGNVFYFDYDSYNLNPDAVSALDAHISAMQGNEANVRLEGHTDER---GTREY 119

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           N  L   RA +    ++ +GVS  RI  +S +   R     + +   + NRR+++
Sbjct: 120 NMALGERRANAVRDYMVVNGVSSYRIETVS-YGEERPIAYGSGESNWAQNRRVEL 173


>gi|238750197|ref|ZP_04611700.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
           ATCC 43380]
 gi|238711741|gb|EEQ03956.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
           ATCC 43380]
          Length = 457

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 12/160 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSS 241
           KR+  L + + +    +V   +   VL +      L+S+ +  +          MF   S
Sbjct: 297 KRMTVLQRPVIAQRPAVVEQKLRLAVLLKDEIAKQLVSVDETTSQSKVIFKGDTMFQVGS 356

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300
               PE I V+ ++ + +      + I GHTD+ P  +    +N  LS  RA +   ++ 
Sbjct: 357 DKVRPEIINVIDRVAQEVHRVQGAVLIVGHTDSMPINKPGFPNNQVLSEKRAANVAHLME 416

Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           K+G+  D+I +  G    +   ++      + NRR++I V
Sbjct: 417 KAGIPTDKI-RFEGKGDIQPVGSNGDAAGRAQNRRVEIFV 455


>gi|58581150|ref|YP_200166.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623073|ref|YP_450445.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|58425744|gb|AAW74781.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367013|dbj|BAE68171.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 241

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   PE    L
Sbjct: 85  AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLSEERAGAVAQYLTAQGVQRERMET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         ++     + NRR++I +
Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226


>gi|89070689|ref|ZP_01157958.1| OmpA family protein [Oceanicola granulosus HTCC2516]
 gi|89043710|gb|EAR49914.1| OmpA family protein [Oceanicola granulosus HTCC2516]
          Length = 229

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +  ++   V  + T   +++++       +FD  S+         L  +   L +  
Sbjct: 95  EAELRRSLGNNVRIDNTGDSLVVTLPQD---ILFDTDSATLSGSLQSDLNALARSLNNYP 151

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
               ++ GHTD +     A  N  LS  RA +    L+ SGVS  RI+ + G        
Sbjct: 152 STTITVIGHTDNT---GEASYNQNLSRRRAQAVTSTLISSGVSAGRINTV-GRGEDAPIA 207

Query: 323 ASDPMNSA--NRRIDILV 338
            +   +    NRR++I++
Sbjct: 208 TNLTEDGRRQNRRVEIII 225


>gi|323345464|ref|ZP_08085687.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
 gi|323093578|gb|EFZ36156.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
          Length = 229

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 9/150 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K+++  +  V +  V+ V        + ++     +  +F  + +     +   L K 
Sbjct: 74  MDKVAAETAAQVKNAKVEQVTDANGLKAVKVTF---DSGILFATNKAELNQSSKNELAKF 130

Query: 256 GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  + +    I GHTD++        N  LS  RA S    L   GVS  +   + G
Sbjct: 131 STVLKKNADCYVDIYGHTDST---GNDGINIPLSNQRAQSVVAYLENCGVSASQFKNVVG 187

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   ++D       NRR+++ +   Q
Sbjct: 188 KGSSDPVASNDTKSGRQLNRRVEVYMYASQ 217


>gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.]
          Length = 403

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD      + +   VL  +  ++  + ++   I+GHTD+       + N +LS +RA 
Sbjct: 299 VYFDTEKWNIVSQYFPVLDNVVGIIKKNPDMKLEIQGHTDSR---GTEKYNQKLSENRAK 355

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           S  + L   GV   +++   G+ +      +D     + NRR+++
Sbjct: 356 SVLEYLAGKGVVRSKLTA-KGYGYSVPAAPNDTEEGMAKNRRVEL 399


>gi|304408922|ref|ZP_07390543.1| type IV / VI secretion system protein, DotU family [Shewanella
           baltica OS183]
 gi|307302925|ref|ZP_07582680.1| type IV / VI secretion system protein, DotU family [Shewanella
           baltica BA175]
 gi|304352743|gb|EFM17140.1| type IV / VI secretion system protein, DotU family [Shewanella
           baltica OS183]
 gi|306913285|gb|EFN43707.1| type IV / VI secretion system protein, DotU family [Shewanella
           baltica BA175]
          Length = 436

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +     L  +  ++ +        + I +       +F    +        V+ KI   L
Sbjct: 297 ARLQQLLQTEIGMQLLEVIELPDRVRIRVG---LHHLFTTGGTDINEGFQPVIVKIARAL 353

Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +   I + G+TD  P   +    NW LSL RA +    L  +G       +  G    
Sbjct: 354 EGTKGRILVNGYTDDQPIFTSRYPSNWHLSLARANAMADSL-AAGADLHGRLQPEGRGEA 412

Query: 319 RLKIASDP--MNSANRRIDI 336
                +D     + NRR++I
Sbjct: 413 EPVAPNDTPENRALNRRVEI 432


>gi|167588752|ref|ZP_02381140.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
          Length = 224

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L  +       +   +S+ G+TD+         N  LS  R
Sbjct: 118 GDALFATGLATLTPTARASLDALLARQGNTAFTRVSVTGYTDSV---GGDASNLALSQRR 174

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L   G++  R   ++G        ++        NRR++I +E 
Sbjct: 175 AQAVAGYLKSHGLNA-RTVAVTGRGSADPVASNATAEGRASNRRVEISLER 224


>gi|78485928|ref|YP_391853.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78364214|gb|ABB42179.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
          Length = 259

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 27/245 (11%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK----------S 166
           +    K                ++   K S+ ++  + + L    D             S
Sbjct: 2   NDISDKDLADAIQEHPEFQKKTRASLKKQSVDKEGGQDEWLITYADAMTLILAFFILILS 61

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGIL 225
           I++ +      L       + +K+++ +  + + S LS  L ++ I            + 
Sbjct: 62  ISEIKQDKFETLQTNLGQGLLKKEKVVNPLQNLESALSKVLESNQINPAEAMTLNENELR 121

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRN-IA 281
           I   D     +F+  S+   P++  ++  + + +           I GHTD +P  +   
Sbjct: 122 I---DLPGELLFEVGSTQLEPKSKQLITALAKEINAFPLHNYLIEIEGHTDDTPIHSIRF 178

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRR 333
             NW LS  RA S  +V   +G+++ R+  I G+A  R K  +            + NRR
Sbjct: 179 PSNWELSAGRAISVLKVFFNTGINKQRLKAI-GYADTRPKKPNRTKKGIAIPGNQATNRR 237

Query: 334 IDILV 338
           ++I V
Sbjct: 238 VEIKV 242



 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 1  MNSHGDKNQE---NDQFIIIKK-----KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMW 52
          MN   DK+      +     KK     K    D       W I YAD MT+++AFF+++ 
Sbjct: 1  MNDISDKDLADAIQEHPEFQKKTRASLKKQSVDKEGGQDEWLITYADAMTLILAFFILIL 60

Query: 53 IINATDDDTKKAIEQYFNP 71
           I+    D  + ++     
Sbjct: 61 SISEIKQDKFETLQTNLGQ 79


>gi|166712665|ref|ZP_02243872.1| OmpA family protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 241

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 10/232 (4%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           S                L       S  Q+ ++   +  ++      L  +     +   
Sbjct: 2   SPAATKSLALALASAIALSACATGGSYVQRDQYGDQTQQQNRTGRNALIGTAIGVAAGLL 61

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
             +          + A         + +        L       G+  +     I +++ 
Sbjct: 62  TGDSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLP 121

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D      FD   S   PE    L  +   L    + ++ + GHTD+         N RLS
Sbjct: 122 DGIT---FDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLS 175

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            +RA +  Q L   GV  +R+  + G         ++     + NRR++I +
Sbjct: 176 EERAGAVAQYLTAQGVQRERMETM-GAGKRYPIADNNTDAGRAKNRRVEIRL 226


>gi|308273524|emb|CBX30126.1| hypothetical protein N47_D29350 [uncultured Desulfobacterium sp.]
          Length = 219

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
            NI   V  +    GI++S+ +     +F+   S+   E   +L  I  V       I I
Sbjct: 85  KNIDGSVDIKEDERGIVLSLHED---ILFEPGKSVIKKENYRILDSIAAVADACPNKIMI 141

Query: 269 RGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP 326
            GHTD  P        NW LS  R        + +  +  DR + + G+   R    ++ 
Sbjct: 142 MGHTDDLPVQVGEYESNWELSAYRGLYVLNYFINNKHLPPDRFN-VGGYGAFRPLFPNNS 200

Query: 327 M--NSANRRIDILVEDRQ 342
               S NRR++I+ + ++
Sbjct: 201 AKNRSLNRRVEIIFKYKE 218



 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/159 (6%), Positives = 51/159 (32%), Gaps = 6/159 (3%)

Query: 18  KKKVAIDDTPNN--LGSWKIVYADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNP 71
           K+     +        +W +  +D + +++ FF+++  +++ +     +T   ++Q    
Sbjct: 6   KRSKIETNDETVIKTDTWMVTLSDIIMLMITFFVMLLTMSSINQRSLKNTFNYLKQSIGG 65

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   S+ I + +   +    +      +  I  +  +  +    +    +     +
Sbjct: 66  SAYQGHRGSESIENIKAALKNIDGSVDIKEDERGIVLSLHEDILFEPGKSVIKKENYRIL 125

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
             ++    +   K  +   ++         +    ++  
Sbjct: 126 DSIAAVADACPNKIMIMGHTDDLPVQVGEYESNWELSAY 164


>gi|33863187|ref|NP_894747.1| outer membrane protein [Prochlorococcus marinus str. MIT 9313]
 gi|33635104|emb|CAE21090.1| Bacterial outer membrane protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 214

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 15/132 (11%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDAS 275
                  ILI +       +FD   +   P  I  LQ + + +  S    + I GHTD+ 
Sbjct: 86  VVEKEKEILIELAAD---VLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTDS- 141

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------- 327
             +     N  LS  RA S     +  G   +      G    +  +++           
Sbjct: 142 --KGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIG 199

Query: 328 NSANRRIDILVE 339
              NRR++I+++
Sbjct: 200 RQRNRRVEIIIK 211


>gi|312130019|ref|YP_003997359.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906565|gb|ADQ17006.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 412

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           + +   F+   +  LPE+   L ++ + L  + T  I I GHTD       AR N +LS 
Sbjct: 302 KLDKVYFNVGQAQILPESYEQLSQLVQYLKVNPTYKIQIEGHTDNQ---GDARANLQLSN 358

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
           DRAY+  Q L++ G+   RI    G+   +    +D       NRR++
Sbjct: 359 DRAYNVRQYLIEQGIETSRIK-FKGYGSSKPVSPNDTEENRRKNRRVE 405


>gi|194365341|ref|YP_002027951.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348145|gb|ACF51268.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 231

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I++++ D      FD   +   P+    L
Sbjct: 85  AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKATLKPQFYGSL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + +I + GHTD+         N RLS +RA S  Q L+  GV   RI  
Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLVGQGVQSVRIET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         +      + NRR++I V
Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226


>gi|116332026|ref|YP_801744.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125715|gb|ABJ76986.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 224

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 7/192 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           K + L KS +  K  N+        LS+      + ++  +   ++    ++   +    
Sbjct: 22  KYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYKRLIATFRSLIDA 81

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             +  +     +++ +       +F   S+      I  ++++  +LA        I GH
Sbjct: 82  GKLKIKIIDGRMVVVLSSD---ILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGH 138

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329
           TD +P       NW L+  RA +    ++K+G+ E+RIS  S     R  + +      S
Sbjct: 139 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS-MGASRPALPNTSPENRS 197

Query: 330 ANRRIDILVEDR 341
           ANRRI+I++   
Sbjct: 198 ANRRIEIVIVPD 209


>gi|172062678|ref|YP_001810329.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995195|gb|ACB66113.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 587

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   +     T   +    E++   +     + G+ D          N +LS+D
Sbjct: 466 DSMSLFDSGKATLRTGTTRAMVDALELIKAHSGKRVLVAGYADDQ---GRPDRNLKLSID 522

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +    L+++ G+   R   I G+   R    +      + NRR++I +   
Sbjct: 523 RASAVRDWLVEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 575


>gi|158522006|ref|YP_001529876.1| OmpA/MotB domain-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158510832|gb|ABW67799.1| OmpA/MotB domain protein [Desulfococcus oleovorans Hxd3]
          Length = 388

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 8/171 (4%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           K       P   EK       + + + A  I+      V ++  +          +    
Sbjct: 219 KPAPEQAAPAVVEKPRPAPAPQPVVEAAPAIADDDRDGVPNDQDQCPGTPIGAK-VNARG 277

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
                   F+++ +  + ++   L ++  VL ++ E  + ++GHTD+         N  L
Sbjct: 278 CWVIEGLNFERARADIMADSFAKLDEVVTVLKNNPELRLEVQGHTDSRGNPG---FNQVL 334

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           S  RA +  +  +  G++ DR+    GF   +    +D     + NRR+++
Sbjct: 335 SEQRAGAVVRYFVSRGIAADRLVS-KGFGPSQPIADNDTAEGRAENRRVEL 384


>gi|154687112|ref|YP_001422273.1| flagellar motor protein MotS [Bacillus amyloliquefaciens FZB42]
 gi|154352963|gb|ABS75042.1| YtxE [Bacillus amyloliquefaciens FZB42]
          Length = 229

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 14/187 (7%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +      S          P S +K    K +  L      + +  + + A ++   +  
Sbjct: 49  AEKFQSAVSSIHTNGSGGEPASSDKANENKEQDLL------LQNVKTYIKAHHLSSKLTA 102

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
           +    G+++ + +     +F    +  L     VL +I  +L      I + GHTD+   
Sbjct: 103 KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRI 159

Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
                  NW LS  RA S  +    +   S  R     G+A  +    +        NRR
Sbjct: 160 STYQFPSNWELSSARAASVIRYFTANEDFSAKRFISA-GYADTKPVKDNKSPGHMKENRR 218

Query: 334 IDILVED 340
           ++I+++ 
Sbjct: 219 VEIVIKK 225



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          ++  ++ +      W + +AD +T+++ FF++++ ++  D +  ++     +  G     
Sbjct: 10 RRNKLEHSG-GSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEP 68

Query: 79 ASK 81
          AS 
Sbjct: 69 ASS 71


>gi|126728270|ref|ZP_01744086.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
 gi|126711235|gb|EBA10285.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
          Length = 911

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 101/270 (37%), Gaps = 16/270 (5%)

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           Q   E++   ++D + +  +  +    ++  T ++    +L+      + ++        
Sbjct: 643 QREAEQALDTQLDEAEERQLLLSQARDELAQTRERASQSQLKVEALNRNVAELRRQLGEL 702

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                +       S    +++  E N  L  +++E+      ++  +   +     L   
Sbjct: 703 QALLDDAKARDAASEVQLQNLGSELNAALARVAQEERRRRVLEEEERKRLEAEKKDLEAY 762

Query: 207 VADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLA---- 260
            ++   +       R  I I        +  +F++ S+   P     + K+  +L     
Sbjct: 763 RSEFFGRLRQVVGDRDDIRIEGDRFVFSSEVLFEQGSADLSPLGRREIAKVSNILRRLAR 822

Query: 261 ----HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYS-AYQVLMKSGVSEDRISKIS 313
                   +I + GHTD  P R  A   DNW LS  RA +    ++   G+  +R+   +
Sbjct: 823 DIPDEIDWIIRVDGHTDNVPVRGSAEFEDNWDLSQARARAVVKDMIDNYGIPPNRL-AAN 881

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           GF  ++    ++   +   NRRI++ + ++
Sbjct: 882 GFGEYQPVNPANTAEARAQNRRIELKLTEK 911


>gi|124002652|ref|ZP_01687504.1| OmpA/MotB [Microscilla marina ATCC 23134]
 gi|123991880|gb|EAY31267.1| OmpA/MotB [Microscilla marina ATCC 23134]
          Length = 352

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  S +     +  +L ++  +L       I + GHTD        + N  LS +R
Sbjct: 235 SKVLFAFSKAEIKTVSFSILDEVVRLLKKYPKSNIHLEGHTDNV---GKDQSNLILSKNR 291

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A S  Q  +  G++ +RI+ I G    R    +        NRR+D++
Sbjct: 292 AASVRQYFINKGINANRITSI-GHGEQRPIDTNTTAKGRQNNRRVDMV 338


>gi|126453039|ref|YP_001067883.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|242315370|ref|ZP_04814386.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254198619|ref|ZP_04905040.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|126226681|gb|ABN90221.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|169655359|gb|EDS88052.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|242138609|gb|EES25011.1| ompA family protein [Burkholderia pseudomallei 1106b]
          Length = 310

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   + G+  +  P           +        S      +T  +        + 
Sbjct: 34  PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   Q            ++ +    +T    S N ++          K        +
Sbjct: 94  ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153

Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242
           +    +  +      +A ++   +    T + G+ +S  +Q          T  F+  S+
Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+   +L ++   LA  +     I GHTD          N  LS  RA +    L+ 
Sbjct: 214 TLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            G++  +++  +G    +    +D     + NRRI+ 
Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306


>gi|45656435|ref|YP_000521.1| peptidoglycan associated periplasmic protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45599670|gb|AAS69158.1| peptidoglycan associated periplasmic protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 660

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 8/148 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +S  L+        + V        I      Q N   F+  S    PE+   L ++ E
Sbjct: 515 PVSQNLNLSSKKKFSEKVEVILQLPPIRERGSIQINNLFFESKSFQIAPESAPELDRLAE 574

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315
           ++  + ++ I I GHTD        +DN  LS  RA +  + L  K  +S+ RI    GF
Sbjct: 575 IVKENPDIEIQIEGHTDNI---GKKKDNLILSEKRAAAVAEYLFQKHSISKTRIQT-KGF 630

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
                   +D   +   NRR++  +  +
Sbjct: 631 GDSVPLSKNDSEEARKKNRRVNFTILKK 658


>gi|24216384|ref|NP_713865.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24197668|gb|AAN50883.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 660

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 8/148 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +S  L+        + V        I      Q N   F+  S    PE+   L ++ E
Sbjct: 515 PVSQNLNLSSKKKFSEKVEVILQLPPIRERGSIQINNLFFESKSFQIAPESAPELDRLAE 574

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315
           ++  + ++ I I GHTD        +DN  LS  RA +  + L  K  +S+ RI    GF
Sbjct: 575 IVKENPDIEIQIEGHTDNI---GKKKDNLILSEKRAAAVAEYLFQKHSISKTRIQT-KGF 630

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341
                   +D   +   NRR++  +  +
Sbjct: 631 GDSVPLSKNDSEEARKKNRRVNFTILKK 658


>gi|309787755|ref|ZP_07682366.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
 gi|308924505|gb|EFP70001.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
          Length = 147

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 8   YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 64

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 65  VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 120

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 121 PANPIASNSTAEGKAQNRRVEITL 144


>gi|329902399|ref|ZP_08273103.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548814|gb|EGF33448.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 224

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   FD + S   P+   VL + G  L  +   + +I GHTD +     A  N  LS+D
Sbjct: 114 PSDISFDTNRSDIKPDFRPVLDRFGNSLNDNASTVVTIIGHTDNT---GSAAINDPLSVD 170

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           RA      L+  GV+  R   I G   +    +++     + NRR++I V +RQ
Sbjct: 171 RAGRTRDYLISRGVAPYRF-TIEGRGENDPIASNNDSTGRARNRRVEIFVAERQ 223


>gi|313681313|ref|YP_004059051.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154173|gb|ADR32851.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
          Length = 367

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E    + +    L  S     +I GHTD++        N +LS  RA   
Sbjct: 265 FATDSTKVDAEGAAKVAEFASFLKESPAYKANIVGHTDST---ASDAYNQKLSEKRAAKV 321

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             +L++ GV   R++   G        ++      + NRRI++ +
Sbjct: 322 KSMLIEDGVDSSRLTS-EGMGEKMPIASNKTKEGRAENRRIEVEL 365


>gi|307312753|ref|ZP_07592383.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|306907188|gb|EFN37694.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|315062099|gb|ADT76426.1| Putative outer membrane protein/OmpA domain protein [Escherichia
           coli W]
 gi|323377319|gb|ADX49587.1| OmpA/MotB domain protein [Escherichia coli KO11]
          Length = 550

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDTLVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|302326566|gb|ADL25767.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 215

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 83/211 (39%), Gaps = 14/211 (6%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           ++ ++    +    +   ++  K     ++I   +       S +       K+ ++   
Sbjct: 8   AEIAKLQGETQAIQNHIAENWEKRAATNRTIEAIQEQIGEARSGKVSDLEAEKQAIKAQK 67

Query: 197 KKISSTLSGLVADNIV---KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            K+ ++ +  +        + +       GI++S+ D     +FD   +    + +  L 
Sbjct: 68  DKLEASKNEAMDKLNALQSQMIQVTKDARGIILSMSD----ILFDVGRATLKTDLMTSLA 123

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           KI  +L+   +   SI G+TD +        N  LS  RA +  + L++ G++E R++  
Sbjct: 124 KIAGILSVYQQFDVSIEGNTDNT---GSEEFNMTLSQQRAENVMKFLVEQGIAETRLTA- 179

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            G         +        NRR+D+++ DR
Sbjct: 180 KGLGMTMPIADNSTKEGRQKNRRVDLVITDR 210


>gi|295134535|ref|YP_003585211.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
           SM-A87]
 gi|294982550|gb|ADF53015.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
           SM-A87]
          Length = 232

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 17/155 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R+   AKKI + + G   + + +G+              D+ +   F         ++  
Sbjct: 79  RMDKQAKKIETEVPGAEVERVGEGINVT----------FDENSGVYFATEKYNINAKSEE 128

Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L K+  +     +    + GHTD +        N  LS +RA +    L   G++  R 
Sbjct: 129 TLNKLANIFKEYPDTNILVEGHTDNT---GSESYNLTLSKNRAQAVTNFLTDHGIAASRF 185

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                +   + K  +        NRR++I +   +
Sbjct: 186 DT-KWYGEAQPKYDNSTAEGRSKNRRVEIAIVANE 219


>gi|293194231|ref|ZP_06609953.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
           odontolyticus F0309]
 gi|292819750|gb|EFF78763.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
           odontolyticus F0309]
          Length = 403

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           +   +        A+         N  T S  I +               S  + +   +
Sbjct: 113 LVSGSTVLGGDGSAVSSSDKGTVVNDGTGSGVITEGPISIIYGGDGSGTYSNADTMVTIT 172

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           V+     T        + +     + S  +         D   G+    +  +  + +  
Sbjct: 173 VEADGSGTYSTTTTSIILDGNGGGNYSNANSMESIINNGDG-SGQFSKGTVTIINNGDGT 231

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +Y    L+ +             +           +        L      G +I++ D
Sbjct: 232 GSYSDEKLTIQNNGNGTATVNGVTVNDAPKVEKVSKLGKFPAVESLKPVESCGTVITLED 291

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
                +FD   S   PE    L+ +  VL +       I GHTD+    +    N +LS 
Sbjct: 292 ---GVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSI---SDEAFNLQLSQ 345

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338
           +RA +    L K GVS   I   +G+   +    ++           + NRR++I +
Sbjct: 346 ERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 400


>gi|224369820|ref|YP_002603984.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
 gi|223692537|gb|ACN15820.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
          Length = 503

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD + +   P +   L  +  +L  +    I ++GHTD          N +LSL R+ +
Sbjct: 400 LFDYNKADIKPTSFDELDNVAMILKKNPALKIDLQGHTDNI---GSKNFNMKLSLKRSAA 456

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
               L+  GV  +R+    GF   R    +      + NRR+++L
Sbjct: 457 VKTYLVSKGVPSERLKT-EGFGFSRPVDTNKTKEGRAKNRRVELL 500


>gi|148260706|ref|YP_001234833.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|326403901|ref|YP_004283983.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
 gi|146402387|gb|ABQ30914.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
 gi|325050763|dbj|BAJ81101.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
          Length = 342

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 97/334 (29%), Gaps = 22/334 (6%)

Query: 27  PNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
            N L  W   Y D   T+LM        F++     +     +             L   
Sbjct: 9   NNGLEIWPG-YVDALSTLLMVTIFVLLVFVLAEAFLSVALSGRNKTITALRSEIAQLSHV 67

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                 +    +    +   L       + ++     +   K               + Q
Sbjct: 68  LALQKSKTASLQDELASMASLMKAAKTREAALMAANAALTAKTATLGAAVTAAGGKLAGQ 127

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +     L   S   + +        +I    +       +E +      +RL +   + 
Sbjct: 128 VKLNAQELQTVSLLNQQIAALRLQLATIAAALDAAQKKDQEEHVQIADLGQRLNEALARK 187

Query: 200 SSTLSGLVADNIV--KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             +L    ++     +  L +     ++       +  +F   S+    +    + K+ +
Sbjct: 188 VQSLEQYRSEFFGVLRKALADQKDIKVVGDRFVFESAVLFPSDSARLSAKGKAEIAKVAQ 247

Query: 258 VLA--------HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +             V+S+ G+ D         +DN+ LS  RA S   +L+  GV ++R
Sbjct: 248 AIEAIAPKIPDKINWVLSVTGYADKEAITGGPYKDNFDLSAARALSVLHLLIADGVPKNR 307

Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           +    GF         +     + NRRI+  +  
Sbjct: 308 VVAA-GFGADHPIATGNTPQDLAQNRRIEFRLTS 340


>gi|294783516|ref|ZP_06748840.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
 gi|294480394|gb|EFG28171.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
          Length = 102

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
              S+  P+   +L  + + +  +   ++I GHTD+       + N  LS  RA +    
Sbjct: 1   FDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSV---GSNQYNIGLSRRRAEAVKAK 57

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           L++ G+ EDRI  I           ++       NRR++  +  R
Sbjct: 58  LIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 102


>gi|148555237|ref|YP_001262819.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148500427|gb|ABQ68681.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 222

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV  E     +L+++        F  +S    P+    L K+  
Sbjct: 78  YMDRQEAKLREQTAGTGVEVERQGDELLLNMPAGIT---FATNSYEVQPQFRTTLDKVAS 134

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L+      + + GHTD++        N  LS +RA +    L   GV+  RI    GF 
Sbjct: 135 TLSEYGKTYVDVYGHTDST---GSDAINEPLSRNRAEAVANYLSGHGVAAARIGT-QGFG 190

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +   ++       ANRR++I +
Sbjct: 191 SRQPVASNATPDGRQANRRVEIKI 214


>gi|78223923|ref|YP_385670.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78195178|gb|ABB32945.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 398

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 58/195 (29%), Gaps = 17/195 (8%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                            +        P L     + +     L      I   L   + D
Sbjct: 218 PQRCSMKTPAIQPAPPQVQAPAVKVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQD 277

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISI 268
                                  +   F+  S++  P +   L  I  +L    +V I I
Sbjct: 278 GARPVDKTTWFTF----------DRLQFETGSAVLKPSSQEQLGNIAAILKAFPQVAIKI 327

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G+TD        + N +LS DRA +  Q L+K G+   R+    G+        +    
Sbjct: 328 GGYTDNV---GDPQANLKLSRDRASNTMQELVKLGIDPSRLES-EGYGEEHPVADNATEE 383

Query: 329 SA--NRRIDILVEDR 341
               NRRID+ V  +
Sbjct: 384 GRQQNRRIDVRVTKK 398


>gi|167722035|ref|ZP_02405271.1| hypothetical protein BpseD_23689 [Burkholderia pseudomallei DM98]
          Length = 433

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432


>gi|167618284|ref|ZP_02386915.1| ompA family protein [Burkholderia thailandensis Bt4]
          Length = 171

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 59  PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 115

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 116 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 168


>gi|332886090|gb|EGK06334.1| hypothetical protein HMPREF9456_00208 [Dysgonomonas mossii DSM
           22836]
          Length = 295

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 9/158 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K R   L   + + L+  +  + ++ +  +  +  + IS+ D+    ++         
Sbjct: 121 QAKNRSDSLNIVMINNLTRSLTRDEMQDLDIKVLKGVVYISLDDRM---LYRSGGYEIST 177

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303
           +   +L KI +++    +    + G+TD  P      R+NW LS  RA S  Q L  + G
Sbjct: 178 KAGEILSKIAKIIMDYKDYSVLVEGNTDTDPISRPNIRNNWDLSALRASSVVQALQNNYG 237

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           V   R++   G   +     +        NRR  I++ 
Sbjct: 238 VDPKRLTAA-GRGEYNPIATNSTAEGKALNRRTQIIIT 274


>gi|261210838|ref|ZP_05925129.1| outer membrane protein A precursor [Vibrio sp. RC341]
 gi|260840088|gb|EEX66683.1| outer membrane protein A precursor [Vibrio sp. RC341]
          Length = 309

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 9/116 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +    +  +F  +SS+    +   L+   +VL    +  ++I GHTD+       + N
Sbjct: 198 VVVFTSSSEKLFSNNSSLL--MSTKSLEGPLDVLKKDPKLKVNIVGHTDSL---GSDKYN 252

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             +S  RA +     + +G+S  RI+ + G         ++     + NRR++I +
Sbjct: 253 QWMSERRAKTVADYFIANGISPSRITAL-GRGESEPIANNNSELGRAQNRRVEINI 307


>gi|188575664|ref|YP_001912593.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520116|gb|ACD58061.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 241

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   PE    L
Sbjct: 85  AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLSEERAGAVAQYLTAQGVQRERMET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         ++     + NRR++I +
Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226


>gi|188036026|pdb|2K1S|A Chain A, Solution Nmr Structure Of The Folded C-Terminal Fragment
           Of Yiad From Escherichia Coli. Northeast Structural
           Genomics Consortium Target Er553
          Length = 149

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 2   YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 58

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 59  VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 114

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 115 PANPIASNSTAEGKAQNRRVEITL 138


>gi|329946279|ref|ZP_08293873.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328527571|gb|EGF54566.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 416

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 18/282 (6%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
                   +    + G         + S          +       +  G  +       
Sbjct: 140 GSMTTSSGSTAVTNNGDGSGTFSDGKVSITNNGDGSGTYSDGKVSIVVNGDGSGTYSDDH 199

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           L   +    +   S+         S  G       ++    N + +      +   +   
Sbjct: 200 LSVVVNGDGSGTYSDSTTGESIVLSGDGSGTYSRGEVSIVNNGDGSGTYSDSTTSIVNDG 259

Query: 187 KRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                +                               G +I++ D     +FD  SS   
Sbjct: 260 TGSAIVNGRTVSAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLEDS---VLFDFGSSDLR 316

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            E    L  +  VL  S      ++GHTD+    +    N  LS  RA +    L   GV
Sbjct: 317 SEASTTLTNLATVLKDSKAPKVQVQGHTDSV---SDDASNQTLSEQRAKAVTDALTSDGV 373

Query: 305 SEDRISKISGFAHHRLKIASDP--------MNSANRRIDILV 338
           +   I  + G+   R    ++             NRR+++ V
Sbjct: 374 TAA-IESV-GYGETRPVAPNESSDGFDNPAGRRLNRRVEVFV 413


>gi|46579053|ref|YP_009861.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603363|ref|YP_967763.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46448466|gb|AAS95120.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563592|gb|ABM29336.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311232899|gb|ADP85753.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 257

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 4/215 (1%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              ++            K  + +       +  +  +++   ++      P ++ ++L  
Sbjct: 37  DMMSLLLCFFILLLSFAKTDIAKFQAALGSIQDAFGVQRERPQDIEAAFSPTTESQVLIT 96

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           ++    +    +++  L  LV +          +     I++    +  +F+  S+  LP
Sbjct: 97  EKLDAAEQEQLEVARMLKELVNEQAEIAKNAIISAEEGGINLRVN-SRALFEPGSARLLP 155

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           +   V++ +  +L      + + GHT +  PF +    +W LS  RA +  + ++  GVS
Sbjct: 156 DGEAVIRLVHTILLKHKYDLIVEGHTGSREPFSSQFPTHWELSAARAVTLVRHILSLGVS 215

Query: 306 EDRISKISGFAHHRLKIA-SDPMNSANRRIDILVE 339
             R+  + G+   R  +  +D     NRR++    
Sbjct: 216 PRRLKAV-GYGDTRPLVPENDDTGELNRRVEFFFR 249


>gi|78356759|ref|YP_388208.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219164|gb|ABB38513.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 253

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 75/241 (31%), Gaps = 11/241 (4%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
                   D                + +  L               +  K          
Sbjct: 8   APPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLMGSIKEAF 67

Query: 164 EKSINKEEN--YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
              I ++E       P   E+      K+  + L   +      +    + K     T  
Sbjct: 68  GVQIKRKEASFAAFSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKTAKITTED 127

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--N 279
            G++I I    +  +F   S+ PLP+       +  +L      + +R HT        +
Sbjct: 128 AGVVIRI---PSYALFAPGSAKPLPDAASKTATVVRILRERNLDLVVRCHTSDEKAEEES 184

Query: 280 IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +   NW LS  RA +  ++L+K G +   R+  + G+A  +  + ++     + N R++ 
Sbjct: 185 LYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAV-GYADSQPLLPNNTDENRAINSRMEF 243

Query: 337 L 337
            
Sbjct: 244 Y 244



 Score = 37.6 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 5  GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
            ++++        K+         L  W   +AD M++L+ FF+++      D +  K 
Sbjct: 2  AAEDKKAPPPP---KRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKT 58

Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPE 91
          +           +   +  F   +P E
Sbjct: 59 LMGSIKEAFGVQIKRKEASFAAFSPSE 85


>gi|323699159|ref|ZP_08111071.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323459091|gb|EGB14956.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 351

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F         E + VL++   +L   +     I GHTD++        N  LS  RA S 
Sbjct: 250 FGFDKYQITDEMVPVLEQAKMILEEDTAATYEISGHTDST---GTEAYNQGLSERRANSV 306

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            + L  +GVS DR+    G+     K  +        NRR++I
Sbjct: 307 MKWLTDNGVSADRLEA-KGYGELAPKYDNATKEGRKLNRRVEI 348


>gi|256425882|ref|YP_003126535.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256040790|gb|ACU64334.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 630

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD         + + L ++  +L  +    I I GHTD        +DN  LS  R
Sbjct: 523 HNIFFDTRQFALKTGSELELNRLVALLRENPTVTIEISGHTDNI---GNTKDNVLLSERR 579

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           A +  + L+  G++ +R+    G+   +    +      + NRR ++ + 
Sbjct: 580 AQAVVKYLVDKGIAAERLQA-KGYGETKPVADNMTAAGRAENRRTELKIL 628


>gi|313144174|ref|ZP_07806367.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
 gi|313129205|gb|EFR46822.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
          Length = 156

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 12/148 (8%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L  +    GV       GI++++        F   S     +   VL    +
Sbjct: 9   YMDYQDKQLRKELQGTGVSVSREGDGIILNMPGDIT---FKSGSDDLSSDFYKVLN--KK 63

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL      ++++ G TD +      + N  LS  RA S    L    V  +R   + G  
Sbjct: 64  VLNKYDKTIVTVVGFTDNT---GSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGLG 119

Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342
                 ++      + NRR++I +   Q
Sbjct: 120 ESEPIASNKTAEGRAKNRRVEISLTAIQ 147


>gi|193065118|ref|ZP_03046192.1| OmpA domain protein [Escherichia coli E22]
 gi|194426303|ref|ZP_03058858.1| OmpA domain protein [Escherichia coli B171]
 gi|260845464|ref|YP_003223242.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
 gi|192927249|gb|EDV81869.1| OmpA domain protein [Escherichia coli E22]
 gi|194415611|gb|EDX31878.1| OmpA domain protein [Escherichia coli B171]
 gi|257760611|dbj|BAI32108.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
          Length = 550

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|327404330|ref|YP_004345168.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319838|gb|AEA44330.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 809

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 76/273 (27%), Gaps = 16/273 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +L   + G+ + Q  P+R      D              +      +       ++   +
Sbjct: 535 DLCPETPGLLEFQGCPDRDGDKIPDKDDACPDLPGLALYRGCPDTDEDGIIDPNDSCPTV 594

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQ 193
                   C +      +  +DLC       +     +     L         +   R  
Sbjct: 595 KGLAAFNGCPDRDGDGLQDSEDLCPDLPGPLANQGCPDSDNDGLYDNVDKCPNEYGSREN 654

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPL 245
           +      +   GL   +     +           I  +    +        F    +I L
Sbjct: 655 EGCPWPDTDKDGLYDKDDACPTIPGPIENRGCPKIEKEEQEILNTAFENLEFASGKAIIL 714

Query: 246 PETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +   L  +  +L       + I GHTD    +  A+ N  LS +RA +  + L   GV
Sbjct: 715 ATSFKSLDDLAALLIKKPEWKLQIAGHTDN---KGDAKKNLTLSKNRAEAVKKYLTSKGV 771

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRID 335
              ++     F   +    +        NRR++
Sbjct: 772 DATKLKP-EWFGQTKPIATNATPEGRQKNRRVE 803


>gi|253700958|ref|YP_003022147.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251775808|gb|ACT18389.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 222

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 9/137 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +     +     E     I +++    +  +FDK+  +  P  +  L +    L  S 
Sbjct: 78  QAVALKKNLPEAQVERQGEKIYVTL---PSGILFDKNKDLLKPAFMESLARAASSLRESQ 134

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I I+GHTD+         N  LS  RA      L+  GV   R+  I G+   R +  
Sbjct: 135 TDIIIQGHTDS---SGSDAINLPLSQRRADRVRDYLVAQGVPTSRLIAI-GYGATRPQFP 190

Query: 324 SDPMNSA--NRRIDILV 338
           +D   +   NRR+ + +
Sbjct: 191 NDSEANRLLNRRVQLEI 207


>gi|134283190|ref|ZP_01769891.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|134245385|gb|EBA45478.1| ompA family protein [Burkholderia pseudomallei 305]
          Length = 312

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   + G+  +  P           +        S      +T  +        + 
Sbjct: 36  PAAVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSPPPPANATPGQVVAGGKVADE 95

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   Q            ++ +    +T    S N ++          K        +
Sbjct: 96  ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 155

Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242
           +    +  +      +A ++   +    T + G+ +S  +Q          T  F+  S+
Sbjct: 156 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 215

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+   +L ++   LA  +     I GHTD          N  LS  RA +    L+ 
Sbjct: 216 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 272

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            G++  +++  +G    +    +D     + NRRI+ 
Sbjct: 273 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 308


>gi|86160609|ref|YP_467394.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85777120|gb|ABC83957.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 248

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +++ +   +FD  SS   PE I  L+++G++LA    + I I G+TD++        N  
Sbjct: 133 LVEMKGDILFDSGSSALKPEAIGKLEQMGDILAKYGDDRIRIEGYTDST---GSKSMNEE 189

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
           LSL RA +  +VL+  GV E +I+ + G    R    +      + NRR+++ ++   
Sbjct: 190 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGSATGRAQNRRVELHIDVPN 246


>gi|315637845|ref|ZP_07893035.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
 gi|315482086|gb|EFU72700.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
          Length = 327

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +   P     +Q I +VL  + +  +I  GHTD +        N +LS  RA   
Sbjct: 223 FEFDKTTINPAFESRIQNIAKVLEENEKYNTILEGHTDNT---GSRAYNQKLSERRAQRV 279

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              LMK G+ + RI ++ G+   + + +++       NRR++
Sbjct: 280 ANELMKFGIEKSRI-EVKGYGQDKPRSSNETKEGRADNRRVE 320


>gi|76818070|ref|YP_336766.1| hypothetical protein BURPS1710b_A1609 [Burkholderia pseudomallei
           1710b]
 gi|126457603|ref|YP_001074182.1| hypothetical protein BURPS1106A_A0139 [Burkholderia pseudomallei
           1106a]
 gi|134280945|ref|ZP_01767655.1| SciP protein [Burkholderia pseudomallei 305]
 gi|167826573|ref|ZP_02458044.1| hypothetical protein Bpseu9_23060 [Burkholderia pseudomallei 9]
 gi|167848091|ref|ZP_02473599.1| hypothetical protein BpseB_22661 [Burkholderia pseudomallei B7210]
 gi|167905011|ref|ZP_02492216.1| hypothetical protein BpseN_22374 [Burkholderia pseudomallei NCTC
           13177]
 gi|167913331|ref|ZP_02500422.1| hypothetical protein Bpse112_22785 [Burkholderia pseudomallei 112]
 gi|226198766|ref|ZP_03794330.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|242313911|ref|ZP_04812928.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|254189633|ref|ZP_04896143.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254195529|ref|ZP_04901957.1| SciP protein [Burkholderia pseudomallei S13]
 gi|76582543|gb|ABA52017.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
 gi|126231371|gb|ABN94784.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|134247967|gb|EBA48051.1| SciP protein [Burkholderia pseudomallei 305]
 gi|157937311|gb|EDO92981.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169652276|gb|EDS84969.1| SciP protein [Burkholderia pseudomallei S13]
 gi|225929206|gb|EEH25229.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|242137150|gb|EES23553.1| OmpA family protein [Burkholderia pseudomallei 1106b]
          Length = 433

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432


>gi|289662994|ref|ZP_06484575.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 241

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   PE    L
Sbjct: 85  AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMDT 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         ++     + NRR++I +
Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226


>gi|281425749|ref|ZP_06256662.1| lipoprotein PG3 [Prevotella oris F0302]
 gi|281400157|gb|EFB30988.1| lipoprotein PG3 [Prevotella oris F0302]
          Length = 225

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 9/145 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  +  + +  V+ V        + ++     +  +F  + +     +   L K  +VL 
Sbjct: 74  AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTSSSKNDLAKFSKVLK 130

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +++  + I GHTD +        N  LS  RA S    L + GVS  +   + G     
Sbjct: 131 DNSDCHVDIYGHTDTT---GNDGINIPLSNRRAESVVNYLKQCGVSGSQFKNVVGKGSAE 187

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
               +        NRR+++ +   Q
Sbjct: 188 PVADNSTAAGRKQNRRVEVYLYASQ 212


>gi|300955043|ref|ZP_07167452.1| OmpA family protein [Escherichia coli MS 175-1]
 gi|300318040|gb|EFJ67824.1| OmpA family protein [Escherichia coli MS 175-1]
          Length = 215

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDIL 337
                 ++      + NRR++I 
Sbjct: 193 PANPIASNSTAEGKAQNRRVEIT 215


>gi|92116250|ref|YP_575979.1| OmpA/MotB [Nitrobacter hamburgensis X14]
 gi|91799144|gb|ABE61519.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 463

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +   P++I +L ++ E  L   T  I I GHTD+      A  N  LS  RA + 
Sbjct: 361 FETGRATLDPDSIGLLDRLTETALRCPTATIEIAGHTDSD---GDASFNQTLSERRAQAV 417

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
              L+K+G+  DR   + G+   +   A+D     + NRRID  V  
Sbjct: 418 VDYLVKAGMPADRFKPM-GYGSVQPIAANDTDEGKAKNRRIDFTVRQ 463


>gi|71909465|ref|YP_287052.1| surface antigen protein [Dechloromonas aromatica RCB]
 gi|71849086|gb|AAZ48582.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Dechloromonas
           aromatica RCB]
          Length = 221

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD       P    VL +    L  +    + I GHTD          N  LS
Sbjct: 109 DIPSDLSFDSGHYDINPALHAVLDRFASTLIQNPVTHVRIVGHTDNV---GGDAINNPLS 165

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           ++RA +    L   GV+ +RI  I G   H     +      + NRR++I V
Sbjct: 166 VNRAAATRDYLASRGVASNRI-SIDGRGSHEPIADNSTPAGRAKNRRVEIFV 216


>gi|258404319|ref|YP_003197061.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796546|gb|ACV67483.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 428

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
           +D   + +FD   S+   +    L     +L  + E    I GHTD++     A  N  L
Sbjct: 318 MDVSISILFDIDKSVVRGDYHDELADATAMLNKNPEANAVIEGHTDST---ASAAYNMEL 374

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           S  RA S    L+ +  +   R+S    +   +    +        NRR+ I ++
Sbjct: 375 SKKRAQSVRDYLVDTFDIDPQRLST-KAYGESQPTATNTTRFGRKLNRRVVITLQ 428


>gi|254515071|ref|ZP_05127132.1| flagellar motor protein [gamma proteobacterium NOR5-3]
 gi|219677314|gb|EED33679.1| flagellar motor protein [gamma proteobacterium NOR5-3]
          Length = 216

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 14/124 (11%)

Query: 225 LISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASP 276
            I+I D R     + +F  +S     E   +L  +       L  + +++ I G TD  P
Sbjct: 77  RITINDGRIGISGSVLFALNSDRLQEEGRELLVTLAAPLEVFLQENDQLLMISGFTDDLP 136

Query: 277 FRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN 331
            ++      DNW LS  RA +  + L+ +G+  DR+   + F   +    +  +   + N
Sbjct: 137 IQSGNLNFADNWELSAQRALTVTRELVAAGLPADRVFAAA-FGDQQPVAPNLDESGRALN 195

Query: 332 RRID 335
           RR++
Sbjct: 196 RRVE 199


>gi|299140724|ref|ZP_07033862.1| lipoprotein PG3 [Prevotella oris C735]
 gi|298577690|gb|EFI49558.1| lipoprotein PG3 [Prevotella oris C735]
          Length = 225

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 9/145 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  +  + +  V+ V        + ++     +  +F  + +     +   L K  +VL 
Sbjct: 74  AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTSSSKNDLAKFSKVLK 130

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +++  + I GHTD +        N  LS  RA S    L + GVS  +   + G     
Sbjct: 131 DNSDCHVDIYGHTDTT---GNDGINIPLSNRRAESVVNYLKQCGVSGSQFQNVVGKGSAE 187

Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342
               +        NRR+++ +   Q
Sbjct: 188 PVADNSTAAGRKQNRRVEVYLYASQ 212


>gi|237508587|ref|ZP_04521302.1| type IV/VI secretion system protein, DotU family [Burkholderia
           pseudomallei MSHR346]
 gi|235000792|gb|EEP50216.1| type IV/VI secretion system protein, DotU family [Burkholderia
           pseudomallei MSHR346]
          Length = 439

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 12/163 (7%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RNTPMFDK 239
            +  L+     I+          +   +L +      L+++ +         R   MF  
Sbjct: 277 ERNALEARIVAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRGDSMFRS 336

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV 298
             S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA    Q+
Sbjct: 337 GESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRAAYVAQI 396

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 397 LVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 438


>gi|148652893|ref|YP_001279986.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148571977|gb|ABQ94036.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
          Length = 314

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F+   S+  P     L ++ + +      I +I GHTD          N  LS  RA 
Sbjct: 208 VLFETDKSVVRPSYYRKLSEVADFMNKYPSTIATIEGHTDDR---ASDSYNLALSQRRAD 264

Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +   V + +  +  +R+  I G+   + +  +D       NRR+  ++E+
Sbjct: 265 AVRNVFIHEFDIDSNRLKAI-GYGESKPRATNDTAEGRQLNRRVMAVIEE 313


>gi|298208747|ref|YP_003716926.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
 gi|83848674|gb|EAP86543.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
          Length = 233

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   E    GI+++  D+ +   FD + S    ++   L K+  VL    
Sbjct: 83  QAQKIEQEIPGAQVERIDDGIVVTF-DENSGVYFDTNKSNINAKSQETLDKLSNVLVEYP 141

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                + GHTD++     A  N  LS DRA S        G+S  R +    F   +   
Sbjct: 142 NTDVLVVGHTDST---GSAEYNMSLSRDRANSVTNYFTSKGLSSGRFTT-KWFGETKPAY 197

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            +D     + NRR+ + +   +
Sbjct: 198 TNDTAEGRAKNRRVQLAILPNE 219


>gi|254486344|ref|ZP_05099549.1| flagellar motor protein [Roseobacter sp. GAI101]
 gi|214043213|gb|EEB83851.1| flagellar motor protein [Roseobacter sp. GAI101]
          Length = 598

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 16/241 (6%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +  ++   ++   L N        Q  E         +       +   L   +N     
Sbjct: 361 ETATSAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAVKEVQLQSLGSDLNTALAR 420

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 +   L    +KRL+   K +    S        + +L       I        +
Sbjct: 421 VAAEERRRAELEAAERKRLEAETKNLEQYRSEFFGRL--RDLLGNQAGVRIEGDRFVFSS 478

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN--IARD 283
             +F   ++    +    + K+ E+L             VI + GHTD  P        D
Sbjct: 479 EVLFPPGAAQLSTDGQREIAKVAEILRNIAADIPPEIDWVIRVDGHTDNQPLSGLGAFAD 538

Query: 284 NWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           NW LS  RA S  + ++   G++ DR+   +GF  ++      S+   + NRRI++ + +
Sbjct: 539 NWELSQARALSVVKYMINFLGIAPDRL-AANGFGQYQPVAEGDSESARAQNRRIELKLTE 597

Query: 341 R 341
           +
Sbjct: 598 K 598


>gi|53720708|ref|YP_109694.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
 gi|52211122|emb|CAH37110.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
          Length = 310

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 83/267 (31%), Gaps = 16/267 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G+  +  P           +        S      +T  +        +    +   Q  
Sbjct: 44  GVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRL 103

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                     ++ +    +T    S N ++          K        ++    +  + 
Sbjct: 104 RDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNE 163

Query: 202 TLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSSIPLPETIVVL 252
                +A ++   +    T + G+ +S  +Q          T  F+  S+   P+   +L
Sbjct: 164 AQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRAIL 223

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            ++   LA  +     I GHTD          N  LS  RA +    L+  G++  +++ 
Sbjct: 224 DQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT 280

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDI 336
            +G    +    +D     + NRRI+ 
Sbjct: 281 -TGVGPDQPIAPNDSADGRARNRRIEF 306


>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
 gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
          Length = 355

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275
           F          I    +  +FD +S+        +L      L + +E   SI GHTDA 
Sbjct: 218 FSCPIPNERQIITAYVDDELFDSNSTTITK--PELLDPFIARLHYYSESTLSIIGHTDAI 275

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
                   N  LS  RA S  +  +KSG+S +RIS   G         ++  N    NRR
Sbjct: 276 ---GSEAYNQSLSEKRAESVAKYFIKSGISNNRIST-QGRGEKDPIAPNNTQNGRYLNRR 331

Query: 334 IDI 336
           +++
Sbjct: 332 VEL 334


>gi|186471751|ref|YP_001863069.1| DotU family type IV/VI secretion system protein [Burkholderia
           phymatum STM815]
 gi|184198060|gb|ACC76023.1| type IV / VI secretion system protein, DotU family [Burkholderia
           phymatum STM815]
          Length = 429

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF             ++ KI   +      
Sbjct: 296 LKDEIAAGTVSVDEDAKHSAVTF---RGDSMFPPGGVAVNTSMGPLIAKIAAEIVKVPGK 352

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ G+TD  P  +     N  LS +RA    Q+L   GV   R+  + G         +
Sbjct: 353 VTVLGYTDNLPIHSHAFASNDALSAERATQVLQMLQADGVPASRLEAM-GKGEADPVADN 411

Query: 325 DP--MNSANRRIDILV 338
                 + NRR++I V
Sbjct: 412 STPQGRAQNRRVEIHV 427


>gi|325105621|ref|YP_004275275.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974469|gb|ADY53453.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 230

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           I+   +  +FD + +         +  +   L    +    + GHTDA         N +
Sbjct: 106 IVKFDSGLLFDFNKATLSATAKQNIDNLAASLNKYPDTDILVVGHTDAI---GTDAVNNK 162

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LSL+RA S     +  GVS  R+   SG        ++D     + NRR++I++   +
Sbjct: 163 LSLERANSVVSYAISKGVSSGRLKS-SGKGKTEPIASNDTDAGRAQNRRVEIVIVANE 219


>gi|229917739|ref|YP_002886385.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
 gi|229469168|gb|ACQ70940.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
          Length = 259

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 9/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             S   +  L + S+    +          +   N  +    K    A  R   L  L +
Sbjct: 37  ASSNIDQTKLEKMSQSFNQVFSGGVSVFQASTASNSDIERTDKTNTTANPRTYELAQLDE 96

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   +  + +   +      +G++++I D+    +F+   +    +   V Q I +
Sbjct: 97  LKEDVNKYIKKNGLESQIKATINSSGLVLTIQDR---ALFNLGEATLDADARAVAQNISQ 153

Query: 258 VL-AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISG 314
           +L       I + GHTD  P        NW LS  RA +    +L    ++  + +  S 
Sbjct: 154 ILEKAGKREIVVSGHTDNIPINTARFPSNWELSSARATAFMRGLLANDALNPAQFTLAS- 212

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVE 339
           +   +    +D       NRR+++L++
Sbjct: 213 YGEFKPIATNDTEEGRSKNRRVEVLIK 239



 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K+K   D   +    W I YAD +T+L+A F+V++  +  D    + + Q FN      
Sbjct: 1   MKRKKKHDHEEHIPEGWLIPYADLLTLLLALFIVLFASSNIDQTKLEKMSQSFNQVFSGG 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSI 102
           ++  +      +  ER+ +     + 
Sbjct: 61  VSVFQASTASNSDIERTDKTNTTANP 86


>gi|86606634|ref|YP_475397.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555176|gb|ABD00134.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
          Length = 273

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 12/248 (4%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
             +     +         +  +          + ++  +S    S     +    ++  +
Sbjct: 31  GMVLPQPLQTQPLPVPQPQANTPPLLPTLSPPQASLPAVSPDADSPKGNPNHGGSTDLER 90

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
           ++ +       +          L +    A   + R +       + ++   A       
Sbjct: 91  EIRELRQQAIQLLIRVEELESRLQRLSSPAAAPEPRRESATT---AEIAPEGASVPAPTA 147

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
               T   +    I      +FD   +   PE   +L ++ + L       + + GHTD 
Sbjct: 148 TPTPTSFQVGTRTISLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDN 207

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK--ISGFAHHRLKIASDPM--NSA 330
                    N  LSL RA +    L    + ED       SGF        +D       
Sbjct: 208 I---GSLNYNLDLSLRRANAVKDYLANL-LPEDHPISWTTSGFGPTLPVADNDTEEGRQR 263

Query: 331 NRRIDILV 338
           NRR+D+++
Sbjct: 264 NRRVDLII 271


>gi|116327359|ref|YP_797079.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120103|gb|ABJ78146.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 224

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 7/192 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           K + L KS +  K  N+        LS+      + ++  +   ++    ++   +    
Sbjct: 22  KYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYRRLIATFRSLIDA 81

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             +  +     +++ +       +F   S+      I  ++++  +LA        I GH
Sbjct: 82  GKLKIKIIDGRMVVVLSSD---ILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGH 138

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329
           TD +P       NW L+  RA +    ++K+G+ E+RIS  S     R  + +      S
Sbjct: 139 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS-MGASRPALPNTSPENRS 197

Query: 330 ANRRIDILVEDR 341
           ANRRI+I++   
Sbjct: 198 ANRRIEIVIVPD 209


>gi|84515980|ref|ZP_01003341.1| OmpA family protein [Loktanella vestfoldensis SKA53]
 gi|84510422|gb|EAQ06878.1| OmpA family protein [Loktanella vestfoldensis SKA53]
          Length = 218

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +  +   +   V      T +++ +       +F  +S+    ++   L  +   L +  
Sbjct: 85  AEELRRALRNDVGVSNNGTNLVVVLSQDL---LFATNSTQIGAQSQNDLMIVARSLTNYP 141

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  I++ GHTD       A  N  LS  RA S   VL   GVS  R+  I G   ++   
Sbjct: 142 DSTINVIGHTDNV---GSASFNQDLSERRAQSVAGVLRSGGVSPGRVRSI-GAGLYQPIA 197

Query: 323 ASDPMNSA--NRRIDILVE 339
           ++        NRR++I++ 
Sbjct: 198 SNATAEGRQLNRRVEIIIT 216


>gi|70733365|ref|YP_263140.1| hypothetical protein PFL_6082 [Pseudomonas fluorescens Pf-5]
 gi|68347664|gb|AAY95270.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 441

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D     V  E      +++I       +F  +S+  L +   ++ +I + +      
Sbjct: 304 LAEDIKAGRVAVEDAVDRSVVTIRGDE---LFASASASILDDYQPLMLRIADAVRKVKGQ 360

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GH+D  P        NW+LS  RA S  Q+L       +R S   G +       +
Sbjct: 361 VRITGHSDNRPIATLRFPSNWKLSQARAESVLQILAAKTGQPERFSA-EGRSDTEPLATN 419

Query: 325 DPM--NSANRRIDILVED 340
                 + NRR++I V  
Sbjct: 420 ATAEGRARNRRVEISVLA 437


>gi|327405084|ref|YP_004345922.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320592|gb|AEA45084.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 681

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 83/234 (35%), Gaps = 14/234 (5%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S+ Q+  +     +++  +  +     K  L   + K  +        +S +K E   + 
Sbjct: 451 SSQQQGNWDIYGFDLYEEARPKAVTIIKGDLKDPTGKPIENAIIEVAYESSDKVEQVRVN 510

Query: 177 PLSKEKILAMKRKKRLQ-------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
               +  + +K +K          D A   S  ++          V        + +   
Sbjct: 511 GNDGKYAVVVKTEKPQDIMVSVKKDGAAFDSKLITKEEIVKKENRVNNNLEVKELKVGEA 570

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
              N  ++D +S     ++  +L++    L  +    I ++GHTD+         N  LS
Sbjct: 571 YTINDILYDYNSDFLSTKSKFILREFARFLKSNPTVKIMVQGHTDSD---GDDAKNLDLS 627

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             RA      L   G+  DR+    G+   + K+ +D     + NRR D L++ 
Sbjct: 628 DRRAKGVKAYLQSQGIESDRLEA-KGYGETKPKVENDTPENKAKNRRTDFLIQG 680


>gi|255319913|ref|ZP_05361114.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
 gi|262379192|ref|ZP_06072348.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
           SH164]
 gi|255303046|gb|EET82262.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
 gi|262298649|gb|EEY86562.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
           SH164]
          Length = 209

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 9/148 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L       GV       G +  I+       FD + S   P     L K+ +
Sbjct: 68  YLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIM--PGNITFDTNKSTIKPNFYTTLNKVAQ 125

Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +   I + G+TD++        N  LS  RA +    L   GV   RI+   G  
Sbjct: 126 TLTEDNKSAILVTGYTDST---GNDSINIPLSQARAQAVANYLAGQGVPRTRINA-QGLG 181

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342
                 ++        NRR++I +   Q
Sbjct: 182 ASNPIASNATAEGREQNRRVEISIYATQ 209


>gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
 gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
          Length = 353

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           +  +  MF+ +S+    E    L  + EVL    +   ++ GHTD++     A  N  +S
Sbjct: 226 ESFSQGMFETNSTELSSEGKTALIPLVEVLQAHPQSSVNVVGHTDST---GAAEYNMMIS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             RA +    + + G++ DRI   SG        ++      + NRR+D  +
Sbjct: 283 KKRAAAVAAYIEEQGIAADRI-AASGEGEENPVASNATAEGRAQNRRVDATI 333


>gi|158424220|ref|YP_001525512.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
 gi|158331109|dbj|BAF88594.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
          Length = 494

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 8/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +   K +        ++I    +    +F  +S+   P    V+ K+   LA     
Sbjct: 361 LEPEQQAKLITVFGRGNSVVIQTQQE----LFASASTTLRPPYPEVIAKVAAALAKFKGP 416

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ G+TD  P R     DN  LS  RA +  Q L        RI+ + G        ++
Sbjct: 417 VNVLGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTV-GKGDADPVASN 475

Query: 325 DP--MNSANRRIDILVE 339
           D       NRR++I++ 
Sbjct: 476 DTPDGRQKNRRVEIVLT 492


>gi|91212188|ref|YP_542174.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
 gi|218559806|ref|YP_002392719.1| hypothetical protein ECS88_3087 [Escherichia coli S88]
 gi|91073762|gb|ABE08643.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
 gi|218366575|emb|CAR04328.1| conserved hypothetical protein; putative membrane protein
           [Escherichia coli S88]
 gi|294493880|gb|ADE92636.1| OmpA domain protein [Escherichia coli IHE3034]
 gi|307625612|gb|ADN69916.1| hypothetical protein UM146_02475 [Escherichia coli UM146]
 gi|315289326|gb|EFU48721.1| OmpA family protein [Escherichia coli MS 110-3]
 gi|323951748|gb|EGB47623.1| OmpA family protein [Escherichia coli H252]
 gi|323957271|gb|EGB52994.1| OmpA family protein [Escherichia coli H263]
          Length = 550

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|117625045|ref|YP_854033.1| putative outer membrane protein [Escherichia coli APEC O1]
 gi|115514169|gb|ABJ02244.1| putative outer membrane protein [Escherichia coli APEC O1]
          Length = 537

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           + +  +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 412 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 468

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 469 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 528

Query: 341 R 341
           R
Sbjct: 529 R 529


>gi|45658882|ref|YP_002968.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602127|gb|AAS71605.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 223

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 7/192 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           K + L KS +  K  N+        LS+      + ++      ++  + +S        
Sbjct: 21  KYESLLKSYEESKLENQRILGEKGDLSRSLEELKRIQEESDRRIQEYKALMSTFRFLIDA 80

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             +  +     +++ +       +F   S+   P     ++++  +LA        I GH
Sbjct: 81  GKLKIKIIDGRMVVVLSSD---ILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGH 137

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD +P       NW L+  RA +    ++K+G+ E RIS  S     R  + +    +  
Sbjct: 138 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEVRISAAS-MGASRPALPNTSPENRS 196

Query: 331 -NRRIDILVEDR 341
            NRRI+I++   
Sbjct: 197 SNRRIEIVIVPD 208


>gi|254473994|ref|ZP_05087387.1| OmpA family protein [Pseudovibrio sp. JE062]
 gi|211956883|gb|EEA92090.1| OmpA family protein [Pseudovibrio sp. JE062]
          Length = 220

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L       GV        I++++ +      F    +      + VL  + 
Sbjct: 79  NYMDRQEAQLRQQLQSSGVSVTRNGNQIVLNMPNDVT---FAVGQATLSSRAMQVLNSVA 135

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V     +   ++ GHTD +     A+ N +LS  RA S    L   GV+  RIS   G+
Sbjct: 136 LVAKEFPQTRLNVYGHTDNT---GSAQFNLQLSQRRADSVSNYLFNQGVNGARISAA-GY 191

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
                  ++      + NRR++I++
Sbjct: 192 GLTSPIASNATEAGRAQNRRVEIIL 216


>gi|114799158|ref|YP_761149.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114739332|gb|ABI77457.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 297

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 9/207 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
             Q E      + ++++ + + ++   E +  +         +                +
Sbjct: 97  GLQREANTQIESLNTQRAEVVSQARMREVASAEAATTVAENRADRSDAVAAGAVADSAAS 156

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +          A    +   +E T+T + +++I +     F   S++        L  + 
Sbjct: 157 ETARLAAEARAAALTAELADYEQTKTDLGVTLILRDLQ--FASGSALLTSGAQGRLAPLA 214

Query: 257 EVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L       I I GHTD+         N  LS  RA S    L  +GV   RI+ I G 
Sbjct: 215 SYLSKQPESRIQIAGHTDSQ---GAEAYNQDLSARRAASVGTYLASTGVDSGRINTI-GL 270

Query: 316 AHHRLKIASDPMNSA--NRRIDILVED 340
                  ++D       NRR++I + D
Sbjct: 271 GESTPLSSNDTAAGRAINRRVEITILD 297


>gi|78047093|ref|YP_363268.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294626580|ref|ZP_06705178.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665669|ref|ZP_06730945.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|78035523|emb|CAJ23169.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292599147|gb|EFF43286.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604564|gb|EFF47939.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 241

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+ ++ + +  ++      L  +     +     +          + A         + +
Sbjct: 30  QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 89

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L       G+  +     I +++ D      FD   S   P+    L  +  
Sbjct: 90  YQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPQFYTALNGVAS 146

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  + G  
Sbjct: 147 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERASAVAQYLTAQGVQRERMETM-GAG 202

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                  +      + NRR++I +
Sbjct: 203 KRYPIADNTTDAGRAKNRRVEIRL 226


>gi|319778087|ref|YP_004134517.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171806|gb|ADV15343.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 498

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 17/201 (8%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           S   D+  G+ L  +  +  +I +     L   +K    A   +         I    + 
Sbjct: 309 SNEGDAAAGELLALNPSIPVAIERASVAPLVEPAKVAPPAANAQ---------IDRIRAA 359

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D    G+   T    I++ I    N  +F    +   PE   +   I   L H    
Sbjct: 360 LAKDVEGGGLAIGTKGDFIVVEIN---NLLLFQSGRAETKPEFQPIAADIAAALEHEPGP 416

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           I I GHTD    R  +  + N+ LSL RA +   ++        R+  + G         
Sbjct: 417 IRIVGHTDNVKPRRSSAFKSNFDLSLARAKAVEALMAAKFSDPSRL-TVDGKGEDEPIAE 475

Query: 324 SDP--MNSANRRIDILVEDRQ 342
           +      + NRR+D+++   +
Sbjct: 476 NATPEGRARNRRVDVMIPREE 496


>gi|307822441|ref|ZP_07652673.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307737007|gb|EFO07852.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 363

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 9/105 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  +S+        +L  +   L        I ++GHT +       + N +LS  RA S
Sbjct: 260 FKYNSAELTLNAKEILDGVAGNLVSYPQKNDIEVQGHTSSE---GTNKYNLKLSQRRAQS 316

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
               L   GV  +R++   G+   +    +      + NRR++++
Sbjct: 317 VVDYLKLKGV-TNRLTA-KGYGETQPIADNSTEAGKAENRRVELI 359


>gi|256419485|ref|YP_003120138.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256034393|gb|ACU57937.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 225

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 19/152 (12%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++   A++I + +     + + +G+                 +  +F    S    +  
Sbjct: 74  KKMDKQAQEIKTEVPNATVERVGEGINVTF------------ASGVLFGFDKSDLTGQAQ 121

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             ++ +  +L    +  + + GHTD +        N  LS  RA +    L   GV+  R
Sbjct: 122 QNIKDLATILNKYPDTYVRVEGHTDTT---GTDSYNMGLSERRANAVATYLKSQGVAASR 178

Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           +     +   +  + ++     + NRR++  +
Sbjct: 179 VQTF-WYGARQPVVPNNSDANKAKNRRVEFSI 209


>gi|114765948|ref|ZP_01444962.1| hypothetical protein 1100011001347_R2601_22192 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541762|gb|EAU44800.1| hypothetical protein R2601_22192 [Roseovarius sp. HTCC2601]
          Length = 360

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
           F+         I+ +     F   S+    E++ +L+ + +V++   +  I I GHTD+ 
Sbjct: 238 FDREACIGRFEILSRAGNIYFGAGSARLSAESVPLLENLYDVVSRCPDLKIEIAGHTDSD 297

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
                   N RLS  RA S  + L   G+ E R+  + G+   +  + +      + NRR
Sbjct: 298 ---GSDAANLRLSELRAASVKEYLQGKGIPESRML-VVGYGEAQPLLENTSAANKARNRR 353

Query: 334 IDI 336
           I+ 
Sbjct: 354 IEF 356


>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
 gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
          Length = 326

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                    ++++ + R T  F   SS    +    L    + L       I + GHTD+
Sbjct: 190 ETINVNQVTIVTLEELRLTVPFAFDSSTITTDDAAKLAPFEQRLKEQDTAKIYVVGHTDS 249

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--N 331
                    N  LS  RA +    L +   +   RI    G        ++   +    N
Sbjct: 250 R---GSESYNQTLSEKRAEAVADTLRQHLNLDSSRIIA-QGRGESDPVASNQTEDGRSQN 305

Query: 332 RRIDIL 337
           RR+DI+
Sbjct: 306 RRVDII 311


>gi|269963902|ref|ZP_06178214.1| putative lipoprotein [Vibrio harveyi 1DA3]
 gi|269831389|gb|EEZ85536.1| putative lipoprotein [Vibrio harveyi 1DA3]
          Length = 219

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 15  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRKHALIGAAAGGATGAG 74

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  E      L  ++   N   F  SS          L+ 
Sbjct: 75  VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 132

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAPGRAIA-R 188

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+       ++        NRR++I + 
Sbjct: 189 GYGERNPICSNQTSEGRACNRRVEIQIL 216


>gi|261252822|ref|ZP_05945395.1| outer membrane protein [Vibrio orientalis CIP 102891]
 gi|260936213|gb|EEX92202.1| outer membrane protein [Vibrio orientalis CIP 102891]
          Length = 222

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+       +  + +      N   F  SS    P     L+ + 
Sbjct: 83  DQQEAALRKELLDSGVQVERVGENQLMLRLE-----NGIGFQSSSYALDPSIHNTLRGVA 137

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 138 RILVEYPDTSLVIDGHTDST---GSDTTNQVLSERRAESVRSYLVSQGVAAGRAVA-RGN 193

Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339
                   +D     + NRR++I + 
Sbjct: 194 GERYPICTNDTTTGRACNRRVEIQIL 219


>gi|209809526|ref|YP_002265064.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
 gi|208011088|emb|CAQ81507.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
          Length = 222

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 50/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            S    L  +    GV  E      L  I+D  N   F  SS          L  +  +L
Sbjct: 83  DSQEQALRDELKSSGVQVERVGDNELKLIMD--NGVGFQSSSYQLDASIYNTLNGVARIL 140

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +    I GHTD+         N  LS  RA S    L+K  V+  R++   G+   
Sbjct: 141 VEYPDTALQIDGHTDS---SGNDTKNQTLSEQRAESVRTYLIKQKVAAGRVNA-RGYGER 196

Query: 319 RLKIASDP--MNSANRRIDILVE 339
                +      + NRR++I + 
Sbjct: 197 YPVFDNSTSQGRACNRRVEITIL 219


>gi|295095609|emb|CBK84699.1| type IV / VI secretion system protein, DotU family [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 412

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 8/179 (4%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
              +    +  L  + + ++     ++  + L   ++     L  +     V  +     
Sbjct: 222 NWRLGDNTSPVLAKIYQSQLPETTIQQPARQLPAVLN-LRGFLKPEIDAGLVAVKDEADR 280

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282
            ++ +   +   +F  +S++       V+ +I + + + +  I + G++D  P R+    
Sbjct: 281 SVVIL---KGDGLFASASTVVRDRYEPVIDRIAQAMNNVSGKILVVGYSDNVPIRSARFA 337

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            N+ LSL+RA S  + L  S    +R+    G         +      + NRR++I + 
Sbjct: 338 SNYELSLERARSVQKQLQGSLSQPERVKA-EGRGEINPVAPNTTPENRARNRRVEITLL 395


>gi|307578587|gb|ADN62556.1| OmpA family protein [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 240

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L       G+  +     I +++ D      FD   S+  P+    L+ + 
Sbjct: 89  NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 145

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    + +I + G+TD+         N RLS DRA +    L   GV  +R+ +ISG 
Sbjct: 146 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 201

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                   +        NRR++I +
Sbjct: 202 GKRYPIADNSTEAGRSKNRRVEIHL 226


>gi|217423043|ref|ZP_03454545.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|254182960|ref|ZP_04889553.1| OmpA family protein [Burkholderia pseudomallei 1655]
 gi|254264206|ref|ZP_04955071.1| SciP protein [Burkholderia pseudomallei 1710a]
 gi|254299754|ref|ZP_04967203.1| SciP protein [Burkholderia pseudomallei 406e]
 gi|157809358|gb|EDO86528.1| SciP protein [Burkholderia pseudomallei 406e]
 gi|184213494|gb|EDU10537.1| OmpA family protein [Burkholderia pseudomallei 1655]
 gi|217393951|gb|EEC33971.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|254215208|gb|EET04593.1| SciP protein [Burkholderia pseudomallei 1710a]
          Length = 439

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 211 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 270

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 271 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 330

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 331 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 390

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 391 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 438


>gi|157889016|dbj|BAF80962.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F        PE    +Q++G+VL  + +  +I  GHTD++        N +LSL+RA 
Sbjct: 222 GYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAK 278

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           +  + L KSGV +++I    G+   + K ++D     + NRR++
Sbjct: 279 AVAKELEKSGVVKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|170734971|ref|YP_001774085.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821009|gb|ACA95590.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 220

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++  P     L  +    A      + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTPAATAALDTLLNQQADRHFARVEVDGYTDAT---GSDAHNQALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 171 ADAVAGYLREHGLKADSF-AAAGHGEANPAASNDTAEGRARNRRVEISLQK 220


>gi|332669308|ref|YP_004452316.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
 gi|332338346|gb|AEE44929.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
          Length = 377

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 13/111 (11%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            +FD  S     +    L  + +VLA       + GHTD+    +    N  LS  RA +
Sbjct: 271 VLFDFGSHAVRADARATLDAVAQVLADVP-AARVEGHTDSV---SSDELNQALSERRADA 326

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338
               L + GVS     +  GF   R    ++            NRR++I+V
Sbjct: 327 VATALGERGVSAA--LETQGFGESRPVAPNEVDGVDNPAGRQLNRRVEIVV 375


>gi|296159295|ref|ZP_06842121.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. Ch1-1]
 gi|295890554|gb|EFG70346.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. Ch1-1]
          Length = 443

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 7/163 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           S E    +    R+   A +       L  +     V  +       ++    R   MF 
Sbjct: 283 SAEVRKQIADIGRMTPPATRALHLKELLKNEIAAGTVSVDEDAHHSSVTF---RGDSMFP 339

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
             ++        ++ KI   +A  +  +S+ G+TD  P ++     N  LS +RA    Q
Sbjct: 340 PGAAAVKTSMTPLITKIAGEIAKVSGKVSVLGYTDNVPIKSRQFASNAALSEERATQIMQ 399

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +L  +GV   R+  + G         +      + NRR++I V
Sbjct: 400 MLQTAGVPAVRLEAV-GRGDADPVGDNTTVQGRAQNRRVEITV 441


>gi|326319363|ref|YP_004237035.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323376199|gb|ADX48468.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 217

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F  + S   P    VL +  E L ++    + I G+TD++        N  LS
Sbjct: 103 DIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVRIVGYTDST---GNDSINNPLS 159

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV--EDRQG 343
           LDRA S    L   GVS  RI ++ G         +D     + NRR++I V    RQG
Sbjct: 160 LDRATSTRNYLTSRGVSGARI-QVEGRGAREPVATNDTAEGRARNRRVEIYVGERPRQG 217


>gi|284035694|ref|YP_003385624.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283814987|gb|ADB36825.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 236

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                   +     E    GI +S+       +FD  S    PET   L +  + L    
Sbjct: 89  QAEEIKRQMPNAQVERVGEGIKVSLGSD---ILFDVDSYALKPETKQQLIEFAKSLNKYE 145

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GH DA+        N  LS  RA +    L   GV   R+ +I G+   +   
Sbjct: 146 DTDVRIEGHADAT---GSDSHNLELSKQRAKAVGSFLESQGVKTSRVDEI-GYGEAQPVA 201

Query: 323 ASDPMNSA--NRRIDILV 338
            +        NRR+D+ V
Sbjct: 202 DNSTEAGRRKNRRVDVAV 219


>gi|309796906|ref|ZP_07691307.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|308119434|gb|EFO56696.1| OmpA family protein [Escherichia coli MS 145-7]
          Length = 550

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|300715167|ref|YP_003739970.1| OmpA family protein [Erwinia billingiae Eb661]
 gi|299061003|emb|CAX58110.1| OmpA family protein [Erwinia billingiae Eb661]
          Length = 412

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +      ++++   +   +F  +S+        VL +I + + +    
Sbjct: 263 LRPEIEQGLVAVKDEADQSVVTL---KGDGLFTSASTSVRGRYEEVLDRIAQAMNNVNGR 319

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S  + L +      R+    G       + +
Sbjct: 320 ILVIGYSDNVPIRSARFASNYELSLARAQSVQERLQQHLSQPQRVKA-EGRGESNPLVPN 378

Query: 325 DPM--NSANRRIDILVE 339
                 + NRR+DI + 
Sbjct: 379 TTAENRARNRRVDITLL 395


>gi|215433411|gb|ACJ66671.1| OmpA domain protein [Myxococcus fulvus HW-1]
          Length = 615

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 9/258 (3%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P + + Q       D    ++ +D      +     Q                    +  
Sbjct: 354 PGDVARQGCSAQDTDGDGIEDMLDACPVE-HGPAARQGCPIPDQDGDEVPDEIDSCPTDP 412

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
             ++      + TD +   N ++         E+    +       +  +  S ++    
Sbjct: 413 GPADNRGCPVRDTDGDGIDNDKDECPNEAGPVERNGCPESDTDKDGVPNRADSCVNEPGD 472

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--I 266
              +   L       I            F+ + +     +  +L  +  V+    E+  +
Sbjct: 473 AKNLGCPLHVLPLVEIRPDRFVVMGKVFFEPTQARIQKRSFELLDWVARVIREHPEIPLV 532

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            +  HTD          N RLS  RA +  Q L+   ++ +R+  + G+   R   ++  
Sbjct: 533 VVGAHTDDR---GFPDANRRLSQARAEAVRQYLIGRDIAPERLKAL-GYGQERPIDSNAT 588

Query: 327 MNSA--NRRIDILVEDRQ 342
            N    NRR++ L+ D Q
Sbjct: 589 SNGRENNRRVEFLLADPQ 606


>gi|218516717|ref|ZP_03513557.1| flagellar motor protein MotB [Rhizobium etli 8C-3]
          Length = 89

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 50/81 (61%)

Query: 1  MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
          M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1  MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61 TKKAIEQYFNPFGKNLMTASK 81
          TK A+  YFNP        ++
Sbjct: 61 TKAAVATYFNPIKLADEKPTE 81


>gi|119478742|ref|ZP_01618600.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
 gi|119448371|gb|EAW29625.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
          Length = 130

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 258 VLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +LA     ISI+GHTD +P +    R NW LS  RA S    L +  +   R  ++SGFA
Sbjct: 1   MLATKKGAISIQGHTDNNPIKTTRFRSNWELSTSRAVSVAHALFEGNILNPRRVEVSGFA 60

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343
             R   ++D     + NRR++I+++   G
Sbjct: 61  ETRPLSSNDTVEGRAKNRRVEIVIQQGLG 89


>gi|108763188|ref|YP_632960.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108467068|gb|ABF92253.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 615

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 83/277 (29%), Gaps = 10/277 (3%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
              +         D++ P       +   S  +       D+  G   +     R    I
Sbjct: 334 PDMDEDGDGVRNADDKCPLVPGDVARQGCSAQDTDGDGIEDMLDGCPLEHGPAARQGCPI 393

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--KRK 189
                 +  +   +  +         C   D +      +    P  +         +  
Sbjct: 394 PDQDGDEVPDEIDSCPSDPGPADNRGCPVRDTDGDGIDNDKDECPNEAGPIERNGCPESD 453

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                +  +  S ++       +   L       I    +       F+ + +     + 
Sbjct: 454 TDKDGVPNRADSCVNEPGDAKNLGCPLHILPLVEIRPDRLVVMGKVFFEPTQARIQKRSY 513

Query: 250 VVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            +L  +  V+    E+  + +  HTD         DN RLS  RA +  Q L+   ++ +
Sbjct: 514 ELLDWVARVIREHPEIPLVVVGAHTDDR---GFPDDNRRLSQGRAEAVRQYLIGRDIAPE 570

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           R+  + G+   R   ++   N    NRR++ L+ D Q
Sbjct: 571 RLKAL-GYGQERPIDSNATSNGRENNRRVEFLLADPQ 606


>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
 gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
          Length = 353

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           +  +  MF+ +S+    E    L  + EVL    +   ++ GHTD++     A  N  +S
Sbjct: 226 ESFSQGMFETNSTELSSEGKSALMPLVEVLQAHPQSSVNVVGHTDST---GAAEYNMMIS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             RA +    + + G+  DRI+  SG        ++      + NRR+D  +
Sbjct: 283 KKRAAAVAAYIEEQGIEADRITA-SGEGEENPVASNATAEGRAQNRRVDATI 333


>gi|332667773|ref|YP_004450561.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336587|gb|AEE53688.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 603

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+I LP +  +L ++  ++       + I+GHTD+         N  LS  RA S 
Sbjct: 499 FKTGSAILLPSSKKILDQVAALMNRYPAYKLDIQGHTDSQ---GKEDFNLSLSKKRAKSC 555

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           Y  L+   +   RI    GF   +   ++        NRR++ +++ +Q
Sbjct: 556 YDYLLLRSIDAKRIEH-EGFGETKPIASNKTPQGRVQNRRVEFVLDVKQ 603


>gi|193076988|gb|ABO11733.2| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
           17978]
          Length = 255

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDANKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255


>gi|126444974|ref|YP_001061168.1| hypothetical protein BURPS668_A0162 [Burkholderia pseudomallei 668]
 gi|126224465|gb|ABN87970.1| SciP protein [Burkholderia pseudomallei 668]
          Length = 433

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKEEPATPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432


>gi|238028341|ref|YP_002912572.1| OmpA family protein [Burkholderia glumae BGR1]
 gi|237877535|gb|ACR29868.1| OmpA family protein [Burkholderia glumae BGR1]
          Length = 219

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L ++   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAITPAFAPLLNELATSLNQNPQITASVVGYTDST---GSAAHNLTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA S    L++ GV+  R+S   G         +      + NRR++I +  
Sbjct: 160 RAQSVVTALVQRGVAGSRLSA-QGMGASNPVADNATDAGRAQNRRVEIYLRA 210


>gi|330817987|ref|YP_004361692.1| OmpA family protein [Burkholderia gladioli BSR3]
 gi|327370380|gb|AEA61736.1| OmpA family protein [Burkholderia gladioli BSR3]
          Length = 216

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F        P    +L  +   L  + ++  S+ G+TD++     A  N  LS +
Sbjct: 103 PSSVTFATDQYAITPAFAPLLNDLASTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L++ GV+  R+    G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVTALVQRGVAGGRLGA-QGMGASNPVADNATEAGRAQNRRVEIYLRAPQ 212


>gi|253991260|ref|YP_003042616.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211638308|emb|CAR66931.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782710|emb|CAQ85875.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica]
          Length = 387

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 7/181 (3%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +  L   +N   +    P+          +  L   +  I+     L      + +    
Sbjct: 201 TGSLYIGLNTRLDQQTEPVLTSIYDLPLPEAALPTESFSIAHLRQVLQPMIEQQDITVSQ 260

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
               + +++   +   +F  +S+   P     LQ++ + L  +T  + +RGH+D  P   
Sbjct: 261 NADNVSVTL---QGGGLFASASATLNPLYQTPLQELAKQLNLTTGKVIVRGHSDNLPIHT 317

Query: 280 -IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
                N+ LSL RA +  Q L  + +   R+ ++         + +      + NRRI+I
Sbjct: 318 HTYSSNYALSLARAETVAQQLRTNLLQPQRL-QVESAGAEAPLVPNTTAKNRALNRRIEI 376

Query: 337 L 337
           +
Sbjct: 377 I 377


>gi|16262781|ref|NP_435574.1| outer membrane protein [Sinorhizobium meliloti 1021]
 gi|307315940|ref|ZP_07595434.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
           meliloti BL225C]
 gi|14523413|gb|AAK64986.1| outer membrane protein [Sinorhizobium meliloti 1021]
 gi|306898414|gb|EFN29107.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
           meliloti BL225C]
          Length = 420

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
             +   FD   S   P    +L  I   L +  +    I GHTDA      A  N RLSL
Sbjct: 77  DVHGLSFDTGQSTLQPGAKPLLDDIATALKNFPDWSLRIVGHTDA---SGSAESNERLSL 133

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +RA +    L++ G+   ++    G    R   +++       NRR++++
Sbjct: 134 ERANTIKAALVERGIDAGKLLAA-GAGQSRPIASNETDEGKALNRRVELM 182


>gi|332882653|ref|ZP_08450265.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679453|gb|EGJ52438.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 290

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + V  +  +  + I+I D+    +F   S         
Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDIKVEKGVVFINISDKM---LFSSGSYTISKNAKN 173

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307
           VL+K+ +V+ +  +    + GHTD    +    RDNW LS+ RA    +VL    G++ +
Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDDVRIKKDCIRDNWDLSVMRATEIVRVLQNDFGIAPE 233

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G +++    ++      + NRR  I+V  +
Sbjct: 234 RMTAA-GRSYYVPVASNTTAEGRAQNRRTRIVVLPK 268


>gi|317402399|gb|EFV82971.1| OmpA family protein [Achromobacter xylosoxidans C54]
          Length = 232

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I        FD   +   P  + VL  +   L    E    + GHTD+
Sbjct: 109 VVEMPDGSLKVNIPSN---VSFDTDKTDLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 165

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N  LS++RA S    L + GV+  R+  + G         +        NR
Sbjct: 166 T---GALAHNQTLSVNRARSVTDYLSRQGVAATRL-SVEGRGPSDPIGDNATAEGRALNR 221

Query: 333 RIDILV 338
           R+++ +
Sbjct: 222 RVEVYL 227


>gi|289208562|ref|YP_003460628.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288944193|gb|ADC71892.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 238

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 10/211 (4%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
               +   + + + +        +D   +          ++  +    +  +        
Sbjct: 30  ERAPDEAANANGEPARDARDTAHRDDSHAAPRNAVYLARDDDAVSARRQHLLDEGHESVA 89

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  +   +    + L        V  E     I +          F+ +S+   P+ +  
Sbjct: 90  LDRVGFYMDVLTARLRQKLAGHDVEMEREGRIITLIF---PGAKAFETNSAEIHPDMVST 146

Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  +G+VL      +++I GHTD++  R     N  LS  RA S  + L  +GV E RI 
Sbjct: 147 LDALGQVLEEYDASLVTIAGHTDSAGARG---YNQHLSEQRALSVGRHLHDNGVGEARII 203

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVE 339
            I G+   R    +D     + NRR+++ VE
Sbjct: 204 AI-GYGPDRPIADNDTPHGRALNRRVELRVE 233


>gi|197295086|ref|YP_002153627.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
 gi|195944565|emb|CAR57169.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
          Length = 220

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++  P     L K+           + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTPAATATLDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 171 ADAVAGYLREHGLKADSF-AANGHGEANPAASNDTVEGRARNRRVEISLQK 220


>gi|152971688|ref|YP_001336797.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956537|gb|ABR78567.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 567

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L + +   +         + V        + +      +  +FD   +     +  VL
Sbjct: 396 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 450

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +       I + G+TD +      + N +LSL RA +    ++++         
Sbjct: 451 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATFFA 507

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G         +D     +ANRR++I +  R
Sbjct: 508 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 539


>gi|255532299|ref|YP_003092671.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255345283|gb|ACU04609.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 175

 Score = 96.6 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290
           +  +F  +SS    ++   +  + +V+ +      +   GH+D +        N  LS  
Sbjct: 66  SEILFPTNSSYLNEKSKSRIDDVAKVIRNKYADRKVLVEGHSDKT---GTPEYNLWLSEK 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RA S    L+  G+ E  I   SG    R    +        NRR+++ V  
Sbjct: 123 RAASVKTYLVSLGIPEANIKT-SGLGDTRPVADNKTKEGRLINRRVEVTVLK 173


>gi|224437727|ref|ZP_03658674.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
          Length = 147

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +      L  +    GV       GI++++        F   S     +   VL    +V
Sbjct: 1   MDYQDKQLRKELQGTGVSVSREGDGIILNMPGDIT---FKSGSDDLSSDFYKVLN--KKV 55

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L      ++++ G TD +      + N  LS  RA S    L    V  +R   + G   
Sbjct: 56  LNKYDKTIVTVVGFTDNT---GSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGLGE 111

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
                ++      + NRR++I +   Q
Sbjct: 112 SEPIASNKTAEGRAKNRRVEISLTAIQ 138


>gi|254474819|ref|ZP_05088205.1| flagellar motor protein [Ruegeria sp. R11]
 gi|214029062|gb|EEB69897.1| flagellar motor protein [Ruegeria sp. R11]
          Length = 655

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 94/301 (31%), Gaps = 16/301 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           +       +  ++Q       +   AS    D  +  E+ +             +     
Sbjct: 358 LANAAAADRDVLQQRLLAALSDREDASAKASDLASLAEQRAALLAQARESLSQEQEISQE 417

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
               T    Q             +   ++    + +  +                 EE  
Sbjct: 418 AQRQTALLNQQVAALREQLGSLQALLDDYKARDVAQQVQMQNLGQDLNAALARAAAEERR 477

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 +E+        +L D A+ +    S        + VL       I        +
Sbjct: 478 RRILEEEERKRLEAEAAQLSDKAQDLEQYRSEFFGRL--RDVLGNQEGVRIEGDRFVFAS 535

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRN--IARD 283
             +F   S+   PE    + K+  +L             +I + GHTD +P        D
Sbjct: 536 EVLFAPGSADLSPEGRAEIAKVARILQTVAAAIPQGINWIIRVDGHTDDTPLGAHPKFAD 595

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           NW LS  RA S  + ++++ G+  +R+S  +GF  ++    ++     + NRRI++   +
Sbjct: 596 NWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAETPEARAQNRRIELKFTE 654

Query: 341 R 341
           R
Sbjct: 655 R 655


>gi|171315988|ref|ZP_02905216.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171098892|gb|EDT43683.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 592

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   +     T   +    E++    +    + G+ D          N +LS+D
Sbjct: 471 DSMSLFDSGKARLRTGTTRAMVDALELIKAHPDKRVLVAGYADDQ---GRPDRNLKLSID 527

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +    L+++ G+   R   I G+   R    +      + NRR++I +   
Sbjct: 528 RASAVRDWLVEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 580


>gi|294624615|ref|ZP_06703288.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665275|ref|ZP_06730569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292601088|gb|EFF45152.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604952|gb|EFF48309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 223

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +++++      + +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDAEVRQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     + + L    E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLATPLTQYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|153875874|ref|ZP_02003478.1| OmpA/MotB [Beggiatoa sp. PS]
 gi|152067662|gb|EDN66522.1| OmpA/MotB [Beggiatoa sp. PS]
          Length = 263

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 75/233 (32%), Gaps = 14/233 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           GS   K      E    Y   +             ++K  +  ++ +  + I        
Sbjct: 30  GSNISKNDGILKEARDTYAVAAAYESSANLEALSKAKKALENAENAETVEEIKHFAYLAK 89

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                   +A ++K   + L  + +S +   + +   + V         L +   ++   
Sbjct: 90  QQAQIAISIAERQKTERERLVGQKNSRIDKPILETQQQSVSINPQLEKQLNNWQQRQTGR 149

Query: 236 M-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRL 287
           +       F+   +         ++ +   L         I GHTD      I   N  L
Sbjct: 150 LTITLNEVFENDRTDLSQTAQSDIKTLAAFLKQHPYFRISIEGHTDN---AGIHTHNLGL 206

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           S  RA S    LM  G++  RI  + GF   R   ++        NRR++I++
Sbjct: 207 SERRATSVKFALMNDGITSKRI-TVKGFGETRPIGSNRTQQGRQKNRRVEIII 258


>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
 gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
          Length = 356

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 205 GLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              ++ I +  +    +  ++++    +  +  MF  +S+    +  + L  + EVL   
Sbjct: 202 QAPSEPITEPAVVVEEKMAVVVTKAQTESYSQEMFATNSTELSTDGKIALMPLVEVLKAH 261

Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            +    + GHTD++     A  N  +S  RA +    + + G+  DRI+  SG       
Sbjct: 262 PQSSVAVVGHTDST---GAAEYNLMISKKRAAAVAAYIEEQGIEADRITA-SGEGEENPI 317

Query: 322 IASDPM--NSANRRIDILV 338
            ++      + NRR+D  +
Sbjct: 318 ASNATAEGRAQNRRVDATI 336


>gi|238023632|ref|YP_002907864.1| outer membrane protein [Burkholderia glumae BGR1]
 gi|237878297|gb|ACR30629.1| Outer membrane protein [Burkholderia glumae BGR1]
          Length = 569

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 81/276 (29%), Gaps = 13/276 (4%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T   G+      P         ++        +  +         ++ R E         
Sbjct: 294 TRRTGLHVPIGAPRPDPLPLPGIAAAPREAYGTGVVPRRGVWCNVEFARHERFASPRPMQ 353

Query: 138 QQSEHCKNSLTRDSEKGKDLCKS--TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                   +L                 +  +++   +     ++ ++      + R  +L
Sbjct: 354 AALSAVAVTLALSICVSAWQNSLLVRRVSHALDAYRDTPALDIAAKRAAVGALRARFAEL 413

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQRNTPMFDKSSSIPLPETIV 250
            +  +  +   +   + +G          + S      +      +FD   +    + I 
Sbjct: 414 ERYANQGVPTGLGWGLYRGAPLHEAVRRAIASWRPASGVTLDQLSLFDSGRATLKRDAIP 473

Query: 251 VLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L+ + G +LA+  + + I GHTD          N +LS  RA +     ++ G      
Sbjct: 474 KLRNVLGRILANRDQRVLIAGHTDDV---GSPEANLKLSQARALAIRDWFVRVGALPVTR 530

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
             I  +   R    +      + NRR++IL     G
Sbjct: 531 FAIQAYGDTRPIADNLTPQGRAMNRRVEILFIPDPG 566


>gi|126732859|ref|ZP_01748650.1| OmpA family protein [Sagittula stellata E-37]
 gi|126706635|gb|EBA05709.1| OmpA family protein [Sagittula stellata E-37]
          Length = 227

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +   V    T   +++++       +F   S+      +  +Q + + +    
Sbjct: 92  EAELRQQLGSQVDIRNTGDRLIVTMPQD---ILFATDSATLSGGLLGDIQDVAQSVLRYP 148

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                I GHTD+      A  N  LS  RA +   V +   V   RI ++ G    +   
Sbjct: 149 NTTTQIIGHTDSD---GDAAYNLSLSQRRAQAVANVFLAQNVPSSRI-QVIGRGEDQPIA 204

Query: 323 ASDP--MNSANRRIDILVE 339
           ++        NRR++I++ 
Sbjct: 205 SNLTPQGKQQNRRVEIVIL 223


>gi|172061391|ref|YP_001809043.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171993908|gb|ACB64827.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 215

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +   S+ G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVIGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALAQRGVAGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 212


>gi|71276562|ref|ZP_00652836.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
           Dixon]
 gi|71900206|ref|ZP_00682345.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|170730945|ref|YP_001776378.1| OmpA family protein [Xylella fastidiosa M12]
 gi|182682310|ref|YP_001830470.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
 gi|71162633|gb|EAO12361.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
           Dixon]
 gi|71730039|gb|EAO32131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|167965738|gb|ACA12748.1| OmpA family protein [Xylella fastidiosa M12]
 gi|182632420|gb|ACB93196.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
          Length = 241

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L       G+  +     I +++ D      FD   S+  P+    L+ + 
Sbjct: 90  NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 146

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    + +I + G+TD+         N RLS DRA +    L   GV  +R+ +ISG 
Sbjct: 147 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 202

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                   +        NRR++I +
Sbjct: 203 GKRYPIADNSTEAGRSKNRRVEIHL 227


>gi|330962099|gb|EGH62359.1| hypothetical protein PMA4326_26442 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 437

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 7/138 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D     V  E      +++I       +F   S+  + +   ++ +I + +      
Sbjct: 300 LADDIKAGKVAVEDAVDRSVVTIRGDE---LFASGSATIVDDFQPLMLRIADAIRKVKGD 356

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + I GH+D  P        NW LS  RA    ++L        R +   G +      ++
Sbjct: 357 VRITGHSDNRPIATLRFPSNWALSQARAEQVLRILAAKTGQPQRFTA-EGRSDTEPLGSN 415

Query: 325 DPM--NSANRRIDILVED 340
                 + NRR++I V  
Sbjct: 416 ATAEGRAKNRRVEITVLA 433


>gi|239905906|ref|YP_002952645.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
 gi|239795770|dbj|BAH74759.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
          Length = 252

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 94/257 (36%), Gaps = 15/257 (5%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           PP  ++ ++ D + DE I ++    +  +T          + +               + 
Sbjct: 2   PPRSAAMSEDDDNYDEEIEESEAPSEWLTTLAD------MSMLLMSFFIMLFSMSSLDVK 55

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
           + SE    +  +  ++             ++     A  +++ + +  +      + + +
Sbjct: 56  KFSESFTSVKTALGVKDKAVTMAPISTGDMNVLVEQAKLKQRIIGEQRRVYDQFRTYVSS 115

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267
             +   V        I I         +F K       E    L+ + + L   + E I+
Sbjct: 116 KGLDGVVAATLEAGKITIGF---PAGVLFPKDGVDLTEEGKGKLRTLFDFLIKAAGERIN 172

Query: 268 IRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           IRG TD  P    +  RDNW +S  RA +  + ++  G+  +R++  +G A       +D
Sbjct: 173 IRGFTDNEPPGAGSRYRDNWEISSLRAVAVLRYMVSLGMPPNRLTA-TGLADLEPLYPND 231

Query: 326 PM--NSANRRIDILVED 340
                + N+R++ ++E 
Sbjct: 232 TPEHRARNQRVEFVLER 248



 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 19/55 (34%)

Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          +       W    AD   +LM+FF++++ +++ D                    A
Sbjct: 20 EESEAPSEWLTTLADMSMLLMSFFIMLFSMSSLDVKKFSESFTSVKTALGVKDKA 74


>gi|162451840|ref|YP_001614207.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161162422|emb|CAN93727.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 628

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 77/279 (27%), Gaps = 14/279 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                  +     D   P +R     +D+      T  +           +       + 
Sbjct: 353 PDVKGDPSPDRAKDGCPPADRDGDTVLDIDDACPSTPGARSADATQNGCPEDSDDDGFHD 412

Query: 132 FYLS----NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
              +        S+  K         G  +  ++D   ++    N               
Sbjct: 413 GIDACPSVRGGASDDPKKIGCPGDTDGDGIADASDACPTVKGPANRDPKKNGCPDDPDGD 472

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D               N      F       + +    +        +    P 
Sbjct: 473 GVRGAADACPNERGPSDPDPRQN--GCPRFVRVNADEIKTSKPVQFVVYGKTRAETVDPI 530

Query: 248 TIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           +  VL ++ + +  + ++  + ++GHTD          N RLS  RA +    L+ +GV 
Sbjct: 531 SDEVLYEVRDTIQQNPDIELVEVQGHTDD---NGTEEYNLRLSQQRADAVLSWLVAAGVP 587

Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
            +++    G+   +    +        NRR+  ++  R+
Sbjct: 588 REKLVA-KGYGFEQPVGDNRVKTGRQKNRRVQFVIVKRK 625


>gi|189499949|ref|YP_001959419.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495390|gb|ACE03938.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
          Length = 229

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                DN V G   E    GI +         +F   SS     +   +QK+  +L   +
Sbjct: 82  QAKEIDNQVDGAQVERVGEGIRVVF---DTGLLFSTGSSTLTSTSSYNIQKLANILNKYS 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +   +  GHTD+         N +LS  RA S   +L    VS+ RIS I G+   R   
Sbjct: 139 DTDIVVEGHTDSQ---GSETYNQQLSEKRAESVSSLLRAYNVSKSRISTI-GYGETRPVA 194

Query: 323 ASDPMNSA--NRRIDILV 338
           +++  +    NRR+++L+
Sbjct: 195 SNETASGRKLNRRVEVLI 212


>gi|300719120|ref|YP_003743923.1| outer membrane protein [Erwinia billingiae Eb661]
 gi|299064956|emb|CAX62076.1| Putative outer membrane protein [Erwinia billingiae Eb661]
          Length = 220

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SSS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++      + N  LS  RA S    L+  GV+ +R+ + SG  
Sbjct: 137 VLKEYPKTAVNVAGYTDST---GSRQLNMTLSQQRADSVGSALITQGVAANRV-RTSGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAEGKAQNRRVEITL 216


>gi|24213198|ref|NP_710679.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193917|gb|AAN47697.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 223

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 7/192 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           K + L KS +  K  N+        LS+      + ++      ++  + +S        
Sbjct: 21  KYESLLKSYEESKLENQRILGEKGDLSRSLEELKRIQEESDRRIQEYKALMSTFRFLIDA 80

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             +  +     +++ +       +F   S+   P     ++++  +LA        I GH
Sbjct: 81  GKLKIKIIDGRMVVVLSSD---ILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGH 137

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD +P       NW L+  RA +    ++K+G+ E RIS  S     R  + +    +  
Sbjct: 138 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEVRISAAS-MGASRPALPNTSPENRS 196

Query: 331 -NRRIDILVEDR 341
            NRRI+I++   
Sbjct: 197 SNRRIEIVIVPD 208


>gi|86138080|ref|ZP_01056655.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
 gi|85825107|gb|EAQ45307.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
          Length = 347

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274
            F          I+ Q  +  F   +S     +   L  + ++++    + I + GHTD 
Sbjct: 224 DFSREACIGRFDILSQSRSVNFAPGTSRLDQRSTSFLDSLFDIISRCPAMVIEVGGHTDD 283

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
              +  A  N RLS  RA S  + L   G++ DR+  + G+      + ++     + NR
Sbjct: 284 ---KGSAAANTRLSQKRASSVVRYLSDKGIARDRLQSV-GYGESTPLVPNNSAQNRAKNR 339

Query: 333 RIDILVED 340
           RI   V +
Sbjct: 340 RIAFKVLN 347


>gi|218887954|ref|YP_002437275.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758908|gb|ACL09807.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 248

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDR 291
            +F+  S     E   +LQ + +  + H  + I++RG TD+SP       RDNW LS  R
Sbjct: 131 VLFEPGSDTITAEGRKLLQHMYDLFVRHPDQDINVRGFTDSSPTPSGGRFRDNWDLSSSR 190

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +  + L+  G++  RI+  +G A       +      + NRR++ ++E 
Sbjct: 191 AINVLRTLLDMGIAPHRITA-TGLADMNPLFPNTTEENRARNRRVEFVLEK 240


>gi|107028365|ref|YP_625460.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116686361|ref|YP_839608.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|105897529|gb|ABF80487.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116652076|gb|ABK12715.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 220

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++  P     L  +    A      + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTPAATAALDTLLNRQADRHFARVEVDGYTDAT---GSDAHNQALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 171 ADAVAGYLREHGLKADSF-AAAGHGEANPAASNDTAEGRARNRRVEISLQK 220


>gi|293194233|ref|ZP_06609955.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
           F0309]
 gi|292819752|gb|EFF78765.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
           F0309]
          Length = 348

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 17/130 (13%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276
                G +I++ D     +FD   S   P+    L K+  VL         I GHTD+  
Sbjct: 224 PVESCGTVITLEDS---ILFDFGESDIRPDAAHTLSKLATVLNDAKVPAAHIYGHTDSV- 279

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
             +    N +LS DRA +    L K G S   I   +G+   +    ++           
Sbjct: 280 --SDEAFNQKLSEDRANAVSAELKKDGASA--ILDATGYGESKPVAPNENADGSDNPAGR 335

Query: 329 SANRRIDILV 338
           + NRR++I +
Sbjct: 336 ALNRRVEIFI 345


>gi|221200257|ref|ZP_03573299.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221205937|ref|ZP_03578951.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221173949|gb|EEE06382.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221179598|gb|EEE12003.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 220

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       +   +S+ G+TD+         N  LS  R
Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSV---GSDASNLALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L + G+   R   ++G        ++        NRR++I ++ 
Sbjct: 171 AEAVAAYLQQRGLQA-RSLTVTGRGSADPIASNATAEGRATNRRVEISLQR 220


>gi|74318359|ref|YP_316099.1| hypothetical protein Tbd_2341 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057854|gb|AAZ98294.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 225

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 15/154 (9%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            ++ +DL K++   +     ++    V    +   +L+S+        FD  S+      
Sbjct: 79  DQQAKDLQKQLRPEI-----EHGDISVEKRASDNALLVSMTASTG---FDNDSAALKAGY 130

Query: 249 IVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  L KI  VL       +++ GHTD+       + N  LS  RA S         V+  
Sbjct: 131 LPTLDKISRVLNQYGKTTVTVIGHTDSV---GTTQYNQALSERRAQSVLDYFASQKVNPL 187

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R+    G      +  +   +    NRR+++ + 
Sbjct: 188 RLESY-GKGETEPRADNSTEDGRRLNRRVELWIL 220


>gi|58580251|ref|YP_199267.1| hypothetical protein XOO0628 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622235|ref|YP_449607.1| hypothetical protein XOO_0578 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188574968|ref|YP_001911897.1| hypothetical protein PXO_04090 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58424845|gb|AAW73882.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84366175|dbj|BAE67333.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519420|gb|ACD57365.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 224

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS     A+K+++      + +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDEAVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+     + + L    E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|269793616|ref|YP_003313071.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Sanguibacter keddieii DSM 10542]
 gi|269095801|gb|ACZ20237.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Sanguibacter keddieii DSM 10542]
          Length = 430

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD       PE+   L  +   LA +   +  I GHTD+    +    N  LS DR
Sbjct: 318 DAALFDFGKHTLRPESQQTLDSLAAALAETGAPVLQIGGHTDSI---SDDAFNQTLSEDR 374

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--------NSANRRIDILV 338
           A +    L++ GV+     + +G+   +                   NRR++I V
Sbjct: 375 AQAVADGLVERGVTAT--LETTGYGETQPVAPETTADGADNPAGRQLNRRVEIFV 427


>gi|226328442|ref|ZP_03803960.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
 gi|225203175|gb|EEG85529.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
          Length = 340

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 6/115 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285
            ++   +  +F         E   VL      +      + +  G+TD +        N 
Sbjct: 207 EMVTLDSLALFASGQYKLKNEATKVLVDALINIKAKPGWLIVISGYTDNT---GNPDLNQ 263

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +LSL RA +    ++K+         + G+  H+    +      + NRR++I +
Sbjct: 264 KLSLKRAEAVRDWMIKTSDIAPSCFAVQGYGQHQPVADNSTLDGRARNRRVEIRL 318


>gi|163755499|ref|ZP_02162618.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
 gi|161324412|gb|EDP95742.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
          Length = 286

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 11/222 (4%)

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           LE      + ++  E   + L + ++      K   +  +   E         KEK L +
Sbjct: 49  LEEKASASARAEALEDRVSDLKKTNQDLIQNTKDMTVLTTKGAENLEKSLESMKEKDLKI 108

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIV---KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            R +   +    ++  +   +   +      +     +  + ISI D+    +F   S  
Sbjct: 109 TRLQDALNKKDSVTLAIVSSLKKAVGIDDPDIEINVEKGVVFISIADKL---LFKSGSYN 165

Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK 301
              +  VVL K+ +V+         + GHTD  P+ + +  DNW LS+ R+ S  +VL +
Sbjct: 166 VTDKAKVVLGKVAKVVNSKPNFECMVEGHTDNVPYNKGVLIDNWDLSVKRSTSIIRVLQE 225

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            GV+  ++    G +++   + +D     + NRR  I+V  +
Sbjct: 226 LGVNPGQLIAA-GRSYYVPLVENDTPENRATNRRTRIVVLPK 266


>gi|315605260|ref|ZP_07880306.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315313077|gb|EFU61148.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 401

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276
                G +I++ D     +FD   S   P+    L  +  VL +       I GHTD+  
Sbjct: 277 PVESCGTVITLEDS---ILFDFGKSDIRPDAAQTLSTLATVLNNAKVPAAHIYGHTDSV- 332

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
             +    N +LS DRA +    L K+GV+       +G+   +    ++           
Sbjct: 333 --SDEAFNQKLSEDRANAVMNDLSKNGVTAT--LDATGYGETKPVAPNENPDGSDNPAGR 388

Query: 329 SANRRIDILV 338
           + NRR++I +
Sbjct: 389 ALNRRVEIYI 398


>gi|325928737|ref|ZP_08189907.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
 gi|325540905|gb|EGD12477.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
          Length = 229

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+ ++ + +  ++      L  +     +     +          + A         + +
Sbjct: 18  QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 77

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L       G+  +     I +++ D      FD   S   P+    L  +  
Sbjct: 78  YQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPQFYTALNGVAS 134

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  + G  
Sbjct: 135 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERASAVAQYLTAQGVQRERMETM-GAG 190

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                  +      + NRR++I +
Sbjct: 191 KRYPIADNTTDAGRAKNRRVEIRL 214


>gi|315921071|ref|ZP_07917311.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694946|gb|EFS31781.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 280

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 20/216 (9%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLA 196
            Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L 
Sbjct: 50  AQMSAQIKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINELQ 109

Query: 197 KKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             I +           +   +       +        + +++ D+    +F   S+    
Sbjct: 110 DMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLDK 166

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-G 303
                L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+  
Sbjct: 167 RGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYN 226

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           V+  +I + SG   +     ++       NRR +I+
Sbjct: 227 VNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261


>gi|307727734|ref|YP_003910947.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307588259|gb|ADN61656.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 321

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 14/281 (4%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           ++          + ++       N    +S      +     +    +   G      + 
Sbjct: 42  VDNSSTSIRTAALPSTSSAGPAVNTAGLASGTTGAGTGAVTASPPPANAAPGQVVVGGKV 101

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                    L+  +++    N + +          +                   + KI 
Sbjct: 102 PDEATKAAVLARLRETYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISRGQLKID 161

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKG------VLFETTRTGILISIIDQRNTPMFD 238
             +   + +   +     L+  +A+ +         +    +  G+L   +  R    F+
Sbjct: 162 GTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIE-FE 220

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +   +L ++   +   T     I GHTD          N  LS  RA +   
Sbjct: 221 TGSATLTAQGRAILDQMAAAMQKMTTRTVAIIGHTDN---SGNRTSNIALSQARADAVKG 277

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            L+  G+   +++  +G    +    +D     + NRRI+ 
Sbjct: 278 YLVAKGIPPQQMTT-TGVGPDQPIATNDTADGRARNRRIEF 317


>gi|290893982|ref|ZP_06556957.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
 gi|290556428|gb|EFD89967.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
          Length = 289

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 92/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 51  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAN 110

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+N+   +  + +  G+LI+I D    
Sbjct: 111 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYITAENLGTKMTTKYSDEGLLITIRDD--- 167

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 168 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 227

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 228 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278



 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 72/188 (38%), Gaps = 3/188 (1%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              + +E  + + + K+       +   +W I Y+D +T+L+A F+V++  ++ D    +
Sbjct: 2   EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +   F    +     ++    ++  P+  + N +  +++E   K   + +  +      
Sbjct: 62  QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAA 121

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             + +N     +  +Q +     +T ++   K   K +D    I   ++      S E  
Sbjct: 122 LLKKQNEEKIEAFKKQIDSY---ITAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELT 178

Query: 184 LAMKRKKR 191
              +   +
Sbjct: 179 AGKREIAK 186


>gi|255037616|ref|YP_003088237.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950372|gb|ACT95072.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 412

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ S    LPE+   L ++ +V++ S    I + GHTD          N  LS  RA S 
Sbjct: 310 FETSKYTLLPESYEELNRLVDVMSDSPTVKIRVEGHTDNV---GDFDKNLELSRQRAESV 366

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340
              L++ G+   RI    G+   R     S+     NRR++ ++ D
Sbjct: 367 KNYLVEKGIEGSRIEA-KGYGGTRPITKGSEEERKKNRRVEFVITD 411


>gi|53723969|ref|YP_104341.1| OmpA domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|67640679|ref|ZP_00439477.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|121600594|ref|YP_991404.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124386056|ref|YP_001027695.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126450255|ref|YP_001082667.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|167001412|ref|ZP_02267211.1| ompA family protein [Burkholderia mallei PRL-20]
 gi|167908671|ref|ZP_02495876.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
 gi|217424718|ref|ZP_03456215.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|237814018|ref|YP_002898469.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|254174698|ref|ZP_04881359.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|254201416|ref|ZP_04907780.1| ompA family protein [Burkholderia mallei FMH]
 gi|254206758|ref|ZP_04913109.1| ompA family protein [Burkholderia mallei JHU]
 gi|254357247|ref|ZP_04973521.1| ompA family protein [Burkholderia mallei 2002721280]
 gi|52427392|gb|AAU47985.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
 gi|121229404|gb|ABM51922.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124294076|gb|ABN03345.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126243125|gb|ABO06218.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|147747310|gb|EDK54386.1| ompA family protein [Burkholderia mallei FMH]
 gi|147752300|gb|EDK59366.1| ompA family protein [Burkholderia mallei JHU]
 gi|148026311|gb|EDK84396.1| ompA family protein [Burkholderia mallei 2002721280]
 gi|160695743|gb|EDP85713.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|217392174|gb|EEC32199.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|237502962|gb|ACQ95280.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|238521446|gb|EEP84897.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|243062825|gb|EES45011.1| ompA family protein [Burkholderia mallei PRL-20]
          Length = 310

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   + G+  +  P           +        S      +T  +        + 
Sbjct: 34  PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   Q            ++ +    +T    S N ++          K        +
Sbjct: 94  ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153

Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242
           +    +  +      +A ++   +    T + G+ +S  +Q          T  F+  S+
Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+   +L ++   LA  +     I GHTD          N  LS  RA +    L+ 
Sbjct: 214 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            G++  +++  +G    +    +D     + NRRI+ 
Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306


>gi|162452025|ref|YP_001614392.1| hypothetical protein sce3752 [Sorangium cellulosum 'So ce 56']
 gi|161162607|emb|CAN93912.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 207

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSL 289
               +F+ +S   LPE+  VL  + E L    +V    + GHTD+         N  LS 
Sbjct: 76  PGPVVFETNSDKLLPESDEVLNLVDEFLKQREDVSLLRVEGHTDSD---GEDAANQTLSE 132

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
            RA +  + L+  G    R   + GF   +    ++     + NRR    +   +G
Sbjct: 133 KRAMAVARWLVAKGNDCKRFIAV-GFGETKPVADNNTPEGKAQNRRTGFFIAAIKG 187


>gi|304311338|ref|YP_003810936.1| Putative outer membrane protein [gamma proteobacterium HdN1]
 gi|301797071|emb|CBL45284.1| Putative outer membrane protein [gamma proteobacterium HdN1]
          Length = 208

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T D   G+       +   +       +         A                  + L 
Sbjct: 19  TTDPYTGESKVSKAAIGAGVGAVLGAAVSSKKDRAKGAAIGAALGGGTGVYFDRQEAKLR 78

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-I 266
                 GV    T  GI +++        F  + S  +P    VL+ +  VL       I
Sbjct: 79  ETLNNTGVSVTRTPEGIKLNM---PGAISFPSNQSGLMPSFYPVLESVALVLKEFNNTAI 135

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + GHTD++     A  N RLS  RA S    L   GV+  R+ ++ G+        +  
Sbjct: 136 KVSGHTDST---GGAELNQRLSEQRAESVAAFLSGQGVARARM-QVYGYGPRYPVADNKS 191

Query: 327 MN--SANRRIDILVEDR 341
               +ANRR++I + + 
Sbjct: 192 EAGKAANRRVEIDILNP 208


>gi|282881335|ref|ZP_06290015.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304811|gb|EFA96891.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 225

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 9/146 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K+++  +  V +  V+ V  +     + ++     +  +F  S +I    +   L K 
Sbjct: 70  MDKVAAETAAQVENAKVEEVTDKNGLKAVKVTF---DSGILFASSKAILNQASKNELAKF 126

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  + +  + I GHTD++        N  LS DRA S    L   GVS  +   +SG
Sbjct: 127 STVLKKNRDCHVDILGHTDST---GNDGINIPLSNDRAQSVVNYLKSCGVSSSQFQNVSG 183

Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338
               +    ++       NRR+++ +
Sbjct: 184 MGSSQPVATNETKAGRQQNRRVEVYL 209


>gi|124267424|ref|YP_001021428.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
 gi|124260199|gb|ABM95193.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
          Length = 219

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   +   PE    L  +   +A     + I  GHTD+         N +LSL R+
Sbjct: 109 DAFFDFDKATLKPEAKSKLDDLASKIAGLNLEVVIAVGHTDSV---GSDAYNQKLSLRRS 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +    L   G+ ++RI    G    +    +      + NRR +I V   +
Sbjct: 166 EAVKAYLESKGIEKNRIYT-EGKGEKQPVADNKTADGRAKNRRTEIEVVGTR 216


>gi|53721140|ref|YP_110125.1| hypothetical protein BPSS0102 [Burkholderia pseudomallei K96243]
 gi|167818184|ref|ZP_02449864.1| hypothetical protein Bpse9_23811 [Burkholderia pseudomallei 91]
 gi|167896649|ref|ZP_02484051.1| hypothetical protein Bpse7_23090 [Burkholderia pseudomallei 7894]
 gi|167921273|ref|ZP_02508364.1| hypothetical protein BpseBC_22178 [Burkholderia pseudomallei
           BCC215]
 gi|52211554|emb|CAH37548.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
          Length = 433

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKDEPATPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432


>gi|254255311|ref|ZP_04948627.1| Outer membrane protein [Burkholderia dolosa AUO158]
 gi|124901048|gb|EAY71798.1| Outer membrane protein [Burkholderia dolosa AUO158]
          Length = 232

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283
            I++    N   FD   +   P+    L  + +    +T     I G+TD++     A  
Sbjct: 122 RITLDSDAN---FDTDRATLKPDARDRLDVLIDAARGTTFQTVAIAGYTDST---GTAEH 175

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           N RLS  RA +  Q L + G+   +   + G+        +      + NRR+DI +E
Sbjct: 176 NQRLSERRAQAVAQYLREHGLRAQKFD-VRGYGESNPVATNTTAAGRAKNRRVDITLE 232


>gi|217965216|ref|YP_002350894.1| chemotaxis protein MotB [Listeria monocytogenes HCC23]
 gi|217334486|gb|ACK40280.1| chemotaxis protein MotB (Motility protein B) [Listeria
           monocytogenes HCC23]
 gi|307570225|emb|CAR83404.1| chemotaxis protein [Listeria monocytogenes L99]
          Length = 275

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 92/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 37  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+N+   +  + +  G+LI+I D    
Sbjct: 97  EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDD--- 153

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264



 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 64/173 (36%), Gaps = 3/173 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K     +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
           Q +     +  ++   K   K +D    I   ++      S E     +   +
Sbjct: 123 QIDSY---IAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172


>gi|322835249|ref|YP_004215275.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
 gi|321170450|gb|ADW76148.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
          Length = 558

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD       P ++ +L      +       I + GHTD       A+ N  LSL 
Sbjct: 434 DSLSLFDTGKYELKPGSLKMLVNTLVDIKAKPGWLIVVAGHTD---ITGDAKANQTLSLK 490

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S     L  S VS      + G+   R    +D     +ANRR++I +
Sbjct: 491 RAGSLRDWMLSTSDVSPT-CFAVQGYGATRPVATNDTPEGRAANRRVEISL 540


>gi|302343736|ref|YP_003808265.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301640349|gb|ADK85671.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 260

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 7/210 (3%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              L     +     +    +E+ K       L  S   +E    P  ++    +     
Sbjct: 18  YTALMILLLAFFILLNSMGATEESKVRQAYKSLMDSFGFQEGGVKPFTTQTMQSSSAVVA 77

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +  + +        +  + +   V    ++    + I       +F   S+   P  + 
Sbjct: 78  AMNPIDEDYVVLRGMVFENRLDDQVRLLRSQGMRTVVINADM---LFAPGSAKLSPNILP 134

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L ++  V+      +S+ GHTD  P+R    +DNW LS  RA S    L+  GVS  R+
Sbjct: 135 FLDEVAAVIKDRAYPLSVYGHTDDEPWRGKGGQDNWTLSAQRALSVVAHLVSRGVSASRL 194

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +   G A  +   ++        N R+ ++
Sbjct: 195 AAF-GLAGTQPIASNTTAEGRRQNNRVALV 223


>gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586]
 gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586]
          Length = 335

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286
              +     F+  SS      I  L  I   L +  +  ++  GHTD++        N  
Sbjct: 219 FSAKNMDGFFENDSSRLSHNVIEQLSNIAATLNNHPQSRAVIVGHTDST---GSTAYNQL 275

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LS DRA  A  +L++ GV+  +I +  G         +      + NRRI+I +
Sbjct: 276 LSEDRAQEAANLLIELGVTPTQI-EWRGLGESNPIADNHTADGRAQNRRIEITI 328


>gi|148652125|ref|YP_001279218.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148571209|gb|ABQ93268.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
          Length = 537

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 9/225 (4%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T        +++       +         L +++     + +  D+   I+  +   L 
Sbjct: 280 GTGGDNCRADIDDGFATDMPAAPHLAAILPLIKNTPNANVIIEGNDVR--IDAPDQAQLD 337

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L  +   A      +        + +   +AD                ++         
Sbjct: 338 KLVADIKAAAPELNVVATGPVDFDAEVKQSIADATTAMDNLGENPDPKDVARALSLQVIN 397

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +    E   VL +  EV+    ++   I GHTD+         N  LS  RA + 
Sbjct: 398 FAVDKTDIPAENQAVLDRAVEVMKQVPDMQLLILGHTDSD---GDDAYNKDLSQRRAEAV 454

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
              L+  G    ++    G         ++  N    NRRI+  V
Sbjct: 455 KAYLVSKGADAAKLMT-KGMGETDPIATNETENGKFRNRRIEFTV 498


>gi|310818239|ref|YP_003950597.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309391311|gb|ADO68770.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 565

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294
           F     I L E+  +L+++ ++L    E+    + GHTD+    +    N  LS  RA S
Sbjct: 426 FATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSR---SSDEYNLELSRRRAAS 482

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
               L +SGV  +R+    GF   R      ++   + NRR++  V    
Sbjct: 483 IRVYLEESGVESERLCS-QGFGRSRPVADNKNEEGMALNRRVEFTVLPPP 531


>gi|126730426|ref|ZP_01746237.1| OmpA domain protein [Sagittula stellata E-37]
 gi|126709159|gb|EBA08214.1| OmpA domain protein [Sagittula stellata E-37]
          Length = 718

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 87/301 (28%), Gaps = 11/301 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +  +  T   T   I          +      +            +       E   +
Sbjct: 307 VTLVALEGTPQGTFDRIVGELETTLPEVFALHAVLPKAPEQDAEGPPDFTATLSPEGKVQ 366

Query: 109 NSVDLKIG---STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
               L       T       R  +   Y +         +   R     + L    +   
Sbjct: 367 LRGRLTTEIARQTADSYARARFGSEAVYTAARLADNLPSDWPVRTLAGLEALSMLANGSI 426

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224
           ++  ++         ++  A         L +  +  ++    + +   +   T    + 
Sbjct: 427 TVTPDDVIVTGQTGNQEASAQIATLLAGKLGENATFDINVTYVERLDPTLGIPTPEQCVG 486

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           +I  +       F+  S+        +L ++ ++L    +  + I GHTD+         
Sbjct: 487 MIKEVVGTRKINFEPGSATLDISARDILDELADLLKTCGDIPLEIGGHTDSQ---GRESM 543

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N +LS DRA S    L    V   R+ ++ G+   +    +D       NRRI+  +   
Sbjct: 544 NQQLSRDRAQSVLDALRGRRV-PVRMYEVKGYGEAQPIADNDTEEGREANRRIEFKLLID 602

Query: 342 Q 342
           +
Sbjct: 603 E 603


>gi|28199574|ref|NP_779888.1| OmpA family protein [Xylella fastidiosa Temecula1]
 gi|28057689|gb|AAO29537.1| OmpA family protein [Xylella fastidiosa Temecula1]
          Length = 242

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L       G+  +     I +++ D      FD   S+  P+    L+ + 
Sbjct: 91  NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 147

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    + +I + G+TD+         N RLS DRA +    L   GV  +R+ +ISG 
Sbjct: 148 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 203

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                   +        NRR++I +
Sbjct: 204 GKRYPIADNSTEAGRSKNRRVEIHL 228


>gi|126664115|ref|ZP_01735108.1| putative flagellar motor protein MotB [Flavobacteria bacterium
           BAL38]
 gi|126623829|gb|EAZ94524.1| putative flagellar motor protein MotB [Flavobacteria bacterium
           BAL38]
          Length = 278

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 11/215 (5%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                 +         +++   ++   T L     +     L  L ++ +   + +  L 
Sbjct: 50  TEREALASQVDFLKKNNTDLINNMGNLTTLTTKGAENLEKSLESLKEKDLKINRLQDALT 109

Query: 194 DLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                  + ++ L  +       +     +  I+ISI D     +F   S     +   V
Sbjct: 110 KKDSVTLALVTSLKREVGIDDPDININVEKGVIMISIADNL---LFKSGSYEVSDKAKGV 166

Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDR 308
           L K+ +V+    +    + GHTD  P +N    DNW LS+ RA S  +VL  + GV+  +
Sbjct: 167 LAKVAKVINSKPDFECMVEGHTDNVPIKNAVLLDNWDLSVKRATSIVRVLHKELGVNPKQ 226

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +    G + +   + +D     + NRR  I++  +
Sbjct: 227 LIPA-GRSSYIPLVENDSPANRAKNRRTKIIIMPK 260


>gi|104780138|ref|YP_606636.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95109125|emb|CAK13822.1| putative outer membrane protein, OmpA family [Pseudomonas
           entomophila L48]
          Length = 239

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRAKMANTGVEVQRQGDQIKLIM---PGNITFATDSANISPSFYSPLNNLANSF 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   R+  + G    
Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRV-TVRGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADANGRAQNRRVEVNLKPIPG 226


>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 317

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 9/138 (6%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHST 263
                     V        + +  +++    + F   S+         L    + L    
Sbjct: 167 AYHWGAPAPVVAEPVYVDQVSVETLEELKLAVPFAFDSTELSAGDRAKLAPFEQRLQAQD 226

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321
              I + G+TD+         N +LS+ RA +  + L     V   RI    G       
Sbjct: 227 AAQIYVVGYTDSR---GSEAYNQKLSVKRADAVAEALRSVMNVDGSRIIA-EGRGESNPV 282

Query: 322 IASDPM--NSANRRIDIL 337
            ++D     + NRR++I+
Sbjct: 283 ASNDTAEGRAQNRRVEII 300


>gi|242279943|ref|YP_002992072.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
           2638]
 gi|242122837|gb|ACS80533.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
           2638]
          Length = 196

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 7/177 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S  + E+    P  +E++   +  ++L+   +        L    + +       +    
Sbjct: 23  SKKQVESSPASPAVEERMAQQQENEQLKSEEQARLERERALQEQALEEERQAAAAKKEFD 82

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
            ++++  N   FD  S     E   +LQ+  E+L     V  +  G+ D          N
Sbjct: 83  NAVVELGNMVHFDFDSFEIKQEYRPLLQQKAEILKKYDNVTMVIEGYCDDR---GTEEYN 139

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
             L   RA +AY+ L+  GV+ +R+S +S F          ++   + NRR    + 
Sbjct: 140 LALGERRARAAYEFLILLGVTPERLSIVS-FGEEDPLDPGQNETAWAKNRRAQFRLT 195


>gi|49082800|gb|AAT50800.1| PA2900 [synthetic construct]
          Length = 270

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%)

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
           M     +F         +        ++ + K   +      +        ++ I    +
Sbjct: 1   MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGES 60

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195
             ++E   +     S+  +    S    +   +     L      ++   + + +L    
Sbjct: 61  LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           AK +S    G      +  +  E T  G+++++ D     +FD + +   P       K+
Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + L  +   VI I G+TD+       + N  LS +RA +   VL   GV   R+ ++ G
Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           +        +      + NRR++I+  + +G
Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263


>gi|163786302|ref|ZP_02180750.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like protein [Flavobacteriales bacterium
           ALC-1]
 gi|159878162|gb|EDP72218.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like protein [Flavobacteriales bacterium
           ALC-1]
          Length = 524

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 12/154 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPE 247
           L+ +   +S           +  +        +   ++ +     N  +FD  S+   P+
Sbjct: 373 LKAIKFHMSGFKEEGKERLFISNLKISEGGEDLRRKLMSEGKISTNGILFDSGSANIQPQ 432

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVS 305
           ++ ++++I +VL     +  +I GHTDA         N +LS  RA +   VL+    +S
Sbjct: 433 SLGIVRQISQVLMQDESIKLNIIGHTDAD---GPDDANLKLSKARAAAVKDVLINIYKIS 489

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            DR++   G    +    +   +  + NRR++ +
Sbjct: 490 ADRLTT-DGKGETQPVGDNKTTDGKAQNRRVEFV 522


>gi|238798361|ref|ZP_04641844.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
 gi|238717819|gb|EEQ09652.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
          Length = 219

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G TD+         N  LS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYDKTAVNVTGFTDS---SGARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|163757275|ref|ZP_02164371.1| OmpA/MotB [Kordia algicida OT-1]
 gi|161322760|gb|EDP94113.1| OmpA/MotB [Kordia algicida OT-1]
          Length = 617

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 10/120 (8%)

Query: 225 LISIIDQ---RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280
           +++I D         FD  SS        +L  I   L +       I GH D+      
Sbjct: 497 VVTIPDPAVGERKVYFDFDSSKLDQNAKEILDNIAANLKNDAGYNISIIGHADSR---GT 553

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            R N +LS++RA +    L    +S   I  I+G         +      + NRR+++++
Sbjct: 554 DRYNDKLSVERAQAIKNYLDSKKLSNSNI-TITGKGESAPIAPNTTPEGRAKNRRVELII 612


>gi|197105040|ref|YP_002130417.1| outer membrane protein [Phenylobacterium zucineum HLK1]
 gi|196478460|gb|ACG77988.1| outer membrane protein [Phenylobacterium zucineum HLK1]
          Length = 190

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDN 284
            ++   ++  F        PE    L ++ E L   +    + I+GHTD++        N
Sbjct: 77  QVVLSDDSVKFPVDRHALSPEAEARLNELAERLKSENRNVYLEIQGHTDST---GPEAYN 133

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            +L   RA +  + L K+GV+ +R+  IS +       ++D     + NRR++I+V  
Sbjct: 134 DQLGEARAEAVRKHLAKAGVALNRMGTIS-YGEEAPVASNDTAEGRAQNRRVEIIVLS 190


>gi|86141593|ref|ZP_01060139.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Leeuwenhoekiella blandensis MED217]
 gi|85832152|gb|EAQ50607.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Leeuwenhoekiella blandensis MED217]
          Length = 224

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 17/156 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++   A++I   + G   + +  G++             D+ +   F  +       + 
Sbjct: 70  KKMDKQAQRIEEEIPGAEVERVDDGIVVN----------FDENSGVYFATNKYNINSASQ 119

Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L  +  V+    +    + GHTD++     A  N  LS +RA +    L+  G++  R
Sbjct: 120 ETLNGLSRVMQEYPQTNVLVVGHTDST---GSADYNMTLSKNRAQAVTNYLVSQGIASGR 176

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +    +   + K  ++       NRR+ + +   Q
Sbjct: 177 FTT-QWYGEEQPKYTNETAEGRSKNRRVTLAIVPNQ 211


>gi|71901865|ref|ZP_00683927.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|71728370|gb|EAO30539.1| OmpA/MotB [Xylella fastidiosa Ann-1]
          Length = 241

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L       G+  +     I +++ D      FD   S+  P+    L+ + 
Sbjct: 90  NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 146

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    + +I + G+TD+         N RLS DRA +    L   GV  +R+ +ISG 
Sbjct: 147 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 202

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                   +        NRR++I +
Sbjct: 203 GKRYPIADNSTEAGRSKNRRVEIHL 227


>gi|300775912|ref|ZP_07085772.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
 gi|300505462|gb|EFK36600.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
          Length = 277

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 10/165 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +    +   L   +S+ L   + +   + V  +  +  ++IS+ D+    ++     
Sbjct: 103 KQLISSNAKNDSLNLALSNKLKRSLDNVSDEDVQVKVLKGVVMISLSDKM---LYKTGDY 159

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299
             LP    VL K+ +V+    +    I G+TD +P  +    RDNW LS  R  S  +VL
Sbjct: 160 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNAPLNSPNLPRDNWDLSALRGTSVAKVL 219

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               GV   RI+   G + +  K  +      + NRR +I++  +
Sbjct: 220 QTQFGVDPARITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 263


>gi|114764496|ref|ZP_01443721.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
 gi|114543063|gb|EAU46082.1| flagellar motor protein [Roseovarius sp. HTCC2601]
          Length = 634

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 16/248 (6%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           +    ++  T  +      +  +     +              E  +   ++    +++ 
Sbjct: 388 SEARSELSQTEARASEAERQRELLNQQVAALRSQLSQLQGLLDEARESDAEAQVQLQNLG 447

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            E N  L  ++ E+    + ++  +   +  +  L    ++   +       + GI I  
Sbjct: 448 SELNAALARVAAEERRRRQLEEEERRRLEAQAEDLERYRSEFFGRLREVIGDQDGIRIEG 507

Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASP-- 276
                 +  +F    +   P     +  I  +L             ++ + GHTD +P  
Sbjct: 508 DRFVFSSEVLFAPGEARLSPLGEGEIANIAGILQRVMSDIPPGIDWILRVDGHTDDTPLR 567

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                 DNW LS  RA S  + L++  G+   R+S  +GF  ++    +D     + NRR
Sbjct: 568 PGARFADNWELSQARALSVVRFLVEDMGIPPQRLSA-NGFGEYQPVDPADSPEARAQNRR 626

Query: 334 IDILVEDR 341
           I++ + +R
Sbjct: 627 IELKLTER 634


>gi|254469405|ref|ZP_05082810.1| OmpA family protein [Pseudovibrio sp. JE062]
 gi|211961240|gb|EEA96435.1| OmpA family protein [Pseudovibrio sp. JE062]
          Length = 473

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T   +             ++ +++     P S      ++     Q ++  +++ +   +
Sbjct: 281 TSPIDLTHQPAPPRAALPNLPQQQATPGTPGSPSSPQVVRSSTAYQQISAFLATEIQQGL 340

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
                  V+       ++I +     + MF  +        I V+ ++ E L      I+
Sbjct: 341 -------VVVMNANGNVVIRLT---GSGMFATARDTLTARFIPVVNRVAEALNTRPGRIN 390

Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           + G++D  P RN   R+N  LS  RA +   ++      ++R+  I G        ++  
Sbjct: 391 VVGYSDNIPIRNAQFRNNVALSKARAQTVADLIKVRLTDKNRVRAI-GRGSADPIASNAT 449

Query: 327 M--NSANRRIDILVEDRQG 343
               + NRRIDI +    G
Sbjct: 450 AEGRAQNRRIDITLIPSTG 468


>gi|283786451|ref|YP_003366316.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
 gi|282949905|emb|CBG89530.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
          Length = 594

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293
           P+F   SS  +P++   L  I  V+  S E    I GH+D++     A  N  LS  RA 
Sbjct: 488 PLFANGSSNLMPDSEKTLLTIVPVIRRSPEKTFLIIGHSDST---GSAATNMALSAARAQ 544

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              + L+   G+   +     G    R    +D     + NRR++I+
Sbjct: 545 VIKEWLVAHTGLPAGQFIT-EGAGDTRPIANNDTKEGRAQNRRVEII 590


>gi|255533625|ref|YP_003093997.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255346609|gb|ACU05935.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 679

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 56/149 (37%), Gaps = 16/149 (10%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               D + +     +    ++   ID+       +++ + +    ++   L  +  ++  
Sbjct: 535 SFSYDQLAQKDTLFSPELCLIPYEIDKPIVLKDVLYEFNKADLTEDSKGKLDYLYTIMVD 594

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +  + I +  HTD+   +     N  LS  RA S    L+  G+ ++R++   G+   R 
Sbjct: 595 NPTIEIELSSHTDS---KGGEAYNMDLSERRAKSCVDYLIGKGIPKNRMTS-KGYGKTRP 650

Query: 321 KIASD--------PMNSANRRIDILVEDR 341
              ++           + NRR +  V  +
Sbjct: 651 IAPNEFPNGKDNPAGRALNRRTEFKVTKK 679


>gi|240145494|ref|ZP_04744095.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
 gi|257202309|gb|EEV00594.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
          Length = 267

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 9/227 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ST   ++++++  +     +   +             G    +  D              
Sbjct: 36  STVDAEKFEKMVASFQNTFSILPNGGSSIGDGTLISSGVSQLEMLDSYYKDKANSETDQE 95

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +  ++   +++ L++  K        +    I   V  +     +++++       +
Sbjct: 96  TDEENDVVEEYKEQALEESEKMSEQLEDAIARYGIQDQVEVDFNAQYVMLNMN---GALL 152

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLDRAYS 294
           FD   +    E   ++ K+G+++      +I + GHTD  P  +    DN  LS  RA +
Sbjct: 153 FDSGHAEIRSEAYPLIDKLGKLIEPYQDNIIEVEGHTDNVPIHSAKYEDNDVLSFYRARA 212

Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
               L   + V    +   SG   +     +      S NRR+ I +
Sbjct: 213 VTDYLRDITTVEPAHLKA-SGRGEYVPVADNTTQEGRSRNRRVIIKI 258



 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 1/140 (0%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               D P    +W   +AD M +L+ FF++++ ++  D +  + +   F      L    
Sbjct: 2   KRKPDEPKGSPAWMNTFADLMNLLLCFFVLLFSMSTVDAEKFEKMVASFQNTFSILPNGG 61

Query: 81  KGIFDEQNPPERSSQ-NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             I D        SQ   +D    +     +        +  ++Y+          + Q 
Sbjct: 62  SSIGDGTLISSGVSQLEMLDSYYKDKANSETDQETDEENDVVEEYKEQALEESEKMSEQL 121

Query: 140 SEHCKNSLTRDSEKGKDLCK 159
            +       +D  +     +
Sbjct: 122 EDAIARYGIQDQVEVDFNAQ 141


>gi|192362185|ref|YP_001983947.1| OmpA domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190688350|gb|ACE86028.1| OmpA domain protein [Cellvibrio japonicus Ueda107]
          Length = 349

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 10/110 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD + S   P+ +  ++K+ + L      + ++ GHTD+      A  N RLS  RA +
Sbjct: 237 LFDTAKSEVKPQYLPQVKKLADALTQYENTVVTVEGHTDSQ---GSAAFNKRLSQQRADA 293

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI--DILVE 339
               L++  G++ DR++ + G+   R    +      + NRR+  ++ V+
Sbjct: 294 VKAALVEKFGIAADRVTAV-GYGLERPIANNATAEGRAQNRRVVGEVSVK 342


>gi|126741131|ref|ZP_01756812.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
 gi|126717768|gb|EBA14489.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
          Length = 346

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 7/143 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            ++S      +     F          I+ +  +  F   +S    ++I  L  + ++++
Sbjct: 208 QSVSSGATAALEVEGNFNREACVGRFEILSRSRSVNFAPGTSRLDGKSISFLDSLYDIVS 267

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              E +I + GHTD    +     N RLS  RA S  + L   G+  +R+    G+    
Sbjct: 268 RCPELIIEVGGHTDD---KGSEAANIRLSQKRANSVVRYLAGKGIQTERLVA-QGYGEAS 323

Query: 320 LKIASDPM--NSANRRIDILVED 340
             + +      + NRRI  +V++
Sbjct: 324 PLVPNTSAANRAKNRRITFVVQN 346


>gi|172065635|ref|YP_001816347.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171997877|gb|ACB68794.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 231

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    +    L  + E    +     +I G+TD++     A  N +LS  RA S 
Sbjct: 130 FDTDKSTLKTDARDKLDVLIEAAHGTPFKTVTISGYTDST---GTAEHNQQLSQRRAQSV 186

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            Q L + G+S  +   + G+  +    ++      + NRR+DI +E
Sbjct: 187 AQYLREHGLSAQKFD-VRGYGENNPVASNATPAGRAKNRRVDITLE 231


>gi|115378368|ref|ZP_01465532.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364644|gb|EAU63715.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 494

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294
           F     I L E+  +L+++ ++L    E+    + GHTD+    +    N  LS  RA S
Sbjct: 355 FATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSR---SSDEYNLELSRRRAAS 411

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
               L +SGV  +R+    GF   R      ++   + NRR++  V    
Sbjct: 412 IRVYLEESGVESERLCS-QGFGRSRPVADNKNEEGMALNRRVEFTVLPPP 460


>gi|91776019|ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gi|91710006|gb|ABE49934.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 214

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           KR+++  +++         +      + +T    + +SI        F    +   P   
Sbjct: 69  KRMEEQKRQMEEATKDTGVE------VSQTEDNQLKLSIPSD---ISFASGKADIEPNFR 119

Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           VVL      L ++    ++I GHTD +        N  LS++RA +    L+  G++  R
Sbjct: 120 VVLDNFATTLKNNPNTLVTIIGHTDNT---GSDAINNPLSVNRAANTRDYLIARGIAASR 176

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              I G       +++D     + NRR++I V
Sbjct: 177 F-TIDGRGSREPLVSNDTPANRAKNRRVEIFV 207


>gi|15598096|ref|NP_251590.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
 gi|116050903|ref|YP_790274.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218890901|ref|YP_002439767.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254235886|ref|ZP_04929209.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
 gi|254241564|ref|ZP_04934886.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
 gi|296388613|ref|ZP_06878088.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           PAb1]
 gi|313108050|ref|ZP_07794215.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
 gi|9948992|gb|AAG06288.1|AE004716_6 probable outer membrane protein precursor [Pseudomonas aeruginosa
           PAO1]
 gi|115586124|gb|ABJ12139.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126167817|gb|EAZ53328.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
 gi|126194942|gb|EAZ59005.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
 gi|218771126|emb|CAW26891.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|310880717|gb|EFQ39311.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
          Length = 269

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%)

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
           M     +F         +        ++ + K   +      +        ++ I    +
Sbjct: 1   MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGES 60

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195
             ++E   +     S+  +    S    +   +     L      ++   + + +L    
Sbjct: 61  LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           AK +S    G      +  +  E T  G+++++ D     +FD + +   P       K+
Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + L  +   VI I G+TD+       + N  LS +RA +   VL   GV   R+ ++ G
Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           +        +      + NRR++I+  + +G
Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263


>gi|325914015|ref|ZP_08176371.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539784|gb|EGD11424.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 241

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 10/149 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             + +        L       G+  +     I +++ D      FD   S   P+    L
Sbjct: 85  AAVGQYQDRQERALRERTANTGIDVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSAL 141

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +   L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  
Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 198

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
           + G         +      + NRR++I +
Sbjct: 199 M-GAGKRYPIADNSTDAGRAQNRRVEIRL 226


>gi|320182433|gb|EFW57330.1| Putative outer membrane lipoprotein [Shigella boydii ATCC 9905]
          Length = 550

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EHIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|257453597|ref|ZP_05618887.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
 gi|257449055|gb|EEV24008.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
          Length = 385

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 214 GVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
            V+ +       I I D     +   FD   ++   +    +QK+ E +        SI 
Sbjct: 240 NVVVDADGCPREIPIDDALRMELRVFFDNDKTVIKDQYKPEIQKVAEKMNEYPNSTASIE 299

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
           GH   +     AR N RLS  RA +   +L+   GV+  RIS + G+ + R    ++   
Sbjct: 300 GHASKTGP--SARYNQRLSEARANAVKSMLVNQFGVAPQRISTV-GYGYDRPIADNNTAE 356

Query: 329 SA--NRRI 334
               NRR+
Sbjct: 357 GRAMNRRV 364


>gi|167564292|ref|ZP_02357208.1| ompA family protein [Burkholderia oklahomensis EO147]
          Length = 243

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 18/246 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153
                +    +   G      +          L   + +    N + +            
Sbjct: 1   GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNW 60

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     +    +  + + Q LA  +++ L+      I  
Sbjct: 61  STNVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHT
Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHT 177

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D          N  LS  RA +    L+  G++  +++  +G    +   ++D     + 
Sbjct: 178 DN---SGNRASNIALSQARADAVKGYLVAKGIASQQLTT-TGVGPDQPIASNDTNDGRAR 233

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 234 NRRIEF 239


>gi|149919600|ref|ZP_01908079.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149819543|gb|EDM78971.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 458

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  +            L S+        F+        ++I  L++  EVL    
Sbjct: 312 EPEDRNGFLDDDGCPDEVPEELTSLSGIMQGVNFETDKDTITKDSIPQLEQAAEVLNRFP 371

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  + I GHTD+       + N  LS  RA +  + L+ +GV   R+    G        
Sbjct: 372 DLRVEISGHTDSR---GGYQHNMDLSRRRAEAVKKWLVDNGVDGSRLET-RGAGPDEPID 427

Query: 323 ASDPMNSA--NRRIDILVED 340
            +D       NRRI+  +  
Sbjct: 428 TNDTSAGRFNNRRIEFTILG 447


>gi|259416340|ref|ZP_05740260.1| OmpA family protein [Silicibacter sp. TrichCH4B]
 gi|259347779|gb|EEW59556.1| OmpA family protein [Silicibacter sp. TrichCH4B]
          Length = 784

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 98/309 (31%), Gaps = 19/309 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++  + A +     A +Q           A K  F  QN  E+ +  +    +       
Sbjct: 478 LLVALEALERAQAAATDQEVLQSRLLAALAEKDDF-AQNLTEQKTLAEQRADLLAQARSA 536

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL--TRDSEKGKDLCKSTDLEKSI 167
             + K  S   +++   L   +  L                RD+ +G  L        + 
Sbjct: 537 LAEEKQVSEEARRETALLNQQVAALREQLGGLQALLDDFKERDAAQGIQLQSLGQDLNTA 596

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
                         +    KR +  ++     +  L    ++   +       + G+ I 
Sbjct: 597 LARAAAEERRRRILEEQERKRLEAERERLANEAKDLEQYRSEFFGQLRSLLGDQEGVRIE 656

Query: 228 IIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPF 277
                  +  +F   S+         + K+  +L             +I + GHTD   F
Sbjct: 657 GDRFVFASEVLFALGSAELSEAGKTEIAKVARILQNVAAAIPDDINWIIRVDGHTDNQRF 716

Query: 278 RNI--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANR 332
                  DNW LS  RA S  + +M   G+   R+   +GF   +    +D     + NR
Sbjct: 717 SGTGKYADNWELSQGRALSVVRYMMDELGIPPGRL-AANGFGEFQPVNPADTPEARAQNR 775

Query: 333 RIDILVEDR 341
           RI++ + +R
Sbjct: 776 RIELKLTER 784


>gi|91781366|ref|YP_556573.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
           LB400]
 gi|91694026|gb|ABE37223.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
           LB400]
          Length = 230

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 8/166 (4%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
            +K+ +             +     LS L        +    T   + I+I  +    +F
Sbjct: 68  PAKQAVDLQPFAASAAARNEAGKQLLSLLAPLRDNHRITISQTPQAVEIAINAR---ILF 124

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           +   +  LPE+  VLQ+I  VL       I + GHTD+ P        NW LS  RA + 
Sbjct: 125 NSGDARLLPESFAVLQQIAAVLRDRAKNNILVEGHTDSLPISTAKYESNWELSSARAGAV 184

Query: 296 YQVLMKSGVSEDRISKISGFAHHRL-KIASDP-MNSANRRIDILVE 339
            +     G+   R++ I G A +    I +D   N+ANRR+ ILVE
Sbjct: 185 VRFFADRGIEGHRMAAI-GRADNFPLIIGNDAVANAANRRVTILVE 229



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          +    D+  +   W I YAD +T LM  FL ++++    +   +      +P  + 
Sbjct: 17 RDESHDSGAHPDRWLISYADLITTLMVLFLALYVLELAKNSELQITTLQHHPAKQA 72


>gi|254465245|ref|ZP_05078656.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206686153|gb|EDZ46635.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 219

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 10/219 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           Q +     I   +    +     ++       +       +  +                
Sbjct: 3   QMKLTTAGIVAAALGLSACTDPATVGTPGSNTQKGAVLGGIIGAGVGAIANDSDRGLGAA 62

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A+        +  ++ +    L        +    T   +++S  +      F   S+
Sbjct: 63  TGALVGAAAGSVIGNQLDAQERELRQTLANDSITIVNTGDRLILSFPNDLT---FATDSA 119

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P     L+++ + L       I + GHTD+      A  N  LS  RA +    +  
Sbjct: 120 AVAPAVQADLRRVADSLVRYPNSAIQVIGHTDSD---GDAGYNQGLSERRANAVASHIQA 176

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            GV   R+ +I G    +   ++      + NRR++++V
Sbjct: 177 GGVPYHRM-RIIGRGESQPVASNLTPEGKARNRRVEVVV 214


>gi|261342420|ref|ZP_05970278.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315055|gb|EFC53993.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 606

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           P+F   SS  +P++   L  +   +  S E +  I GH+D++     A  N  LS +RA 
Sbjct: 489 PLFANGSSTLMPDSEKTLLAVVPAIRRSPEKMFLIVGHSDST---GSAATNLALSAERAQ 545

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              + L+   G+  ++     G    R    +D     + NRR++I+   RQ
Sbjct: 546 VIKEWLVAHTGLPAEQFIT-EGAGDTRPVANNDTKDGRAQNRRVEIIPLSRQ 596


>gi|107102449|ref|ZP_01366367.1| hypothetical protein PaerPA_01003511 [Pseudomonas aeruginosa PACS2]
          Length = 269

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 96/271 (35%), Gaps = 12/271 (4%)

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
           M     +F         +        ++ + K   +      +        ++ +    +
Sbjct: 1   MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVVRAGES 60

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195
             ++E   +     S+  +    S    +   +     L      ++   + + +L    
Sbjct: 61  LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           AK +S    G      +  +  E T  G+++++ D     +FD + +   P       K+
Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + L  +   VI I G+TD+       + N  LS +RA +   VL   GV   R+ ++ G
Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           +        +      + NRR++I+  + +G
Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263


>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 335

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS         L    + L       I + G+TD+   +     N +LS  RA + 
Sbjct: 220 FAFDSSSISTGDAAKLVPFEQRLQEQDAAQIYVVGYTDS---KGSEAYNQKLSERRADAV 276

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L     V   RI    G        ++      + NRR++I+
Sbjct: 277 ADALRAHLNVDGSRIIA-EGRGEADPVASNQTEEGRAQNRRVEIV 320


>gi|167590675|ref|ZP_02383063.1| hypothetical protein BuboB_35381 [Burkholderia ubonensis Bu]
          Length = 394

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 7/162 (4%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +++I A+ R       A       + L  +     V  +       ++    R   MF  
Sbjct: 235 EKQIAAIGRMTPPPPPAAPALRLAALLRNEIAAGTVSVDEDARHSTVTF---RGDAMFPP 291

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298
             +     +  ++ KI   +A     +++ G+TD +P R  A   N  LS  RA    Q+
Sbjct: 292 GKAAVNASSGPLIAKIAAEIARVPGKVTVLGYTDNAPVRGSAFPSNEALSDARATQVMQM 351

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           L  +GV  +R+    G         +      + NRR++I V
Sbjct: 352 LQAAGVPANRL-AALGKGAANPIGDNRTVPGRALNRRVEITV 392


>gi|116872075|ref|YP_848856.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|116740953|emb|CAK20073.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 275

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 91/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++          +K+++  
Sbjct: 37  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKGKGPDDPNVNAVLKAMDEQDKKKDAN 96

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+ +   +  + +  G+LI+I D    
Sbjct: 97  EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAERLGAKMTTKYSDEGLLITIRDD--- 153

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264



 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 69/209 (33%), Gaps = 1/209 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPHEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    +   P+  + N +  ++DE   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKGKGPDDPNVNAVLKAMDEQDKKKDANEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +    +         K   +   +    +         L+  K    K    L    K
Sbjct: 123 QIDSYIAAERLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGK 182

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226
                +     DN+       ++   + +
Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211


>gi|107024166|ref|YP_622493.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|105894355|gb|ABF77520.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
          Length = 247

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                 +T  +        +    +   Q        T   ++ +    +T    S N +
Sbjct: 10  APPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQ 69

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISII 229
           +          K        +++   +  +      +A ++   +    T + G+ +S  
Sbjct: 70  KLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSAS 129

Query: 230 DQ--------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
           +Q          T  F+  S+   P+  ++L ++   LA        I GHTD       
Sbjct: 130 EQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGN 186

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
              N  LS  RA +    L+   +   +++  +G    +    +D     + NRRI+  V
Sbjct: 187 RTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDMADGRARNRRIEFRV 245


>gi|312884493|ref|ZP_07744197.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367805|gb|EFP95353.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 222

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 64/209 (30%), Gaps = 11/209 (5%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     +  +           +      ++  I A         
Sbjct: 18  QATQRQNATTGQDETNSTTQGAIIGAIAGAAIGLATGDNAKERRNQALIGAAGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           +        + L  + +  GV  E T    + + + +      F   SS         L+
Sbjct: 78  IGYYFDQQEAALRKELLNSGVQVERTGENQLRLRMENGIG---FSSGSSTLDNSIHKTLR 134

Query: 254 KIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +  +L    E   +  G+TD++      R N  LS  RA S    L+  GV+  R    
Sbjct: 135 GVARILVEYPETSLVIEGNTDST---GSDRTNQILSEKRAESVRGYLVGQGVAPGRAVS- 190

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVE 339
            G    +    +        NRR++I + 
Sbjct: 191 RGLGERQPICTNSTKEGRACNRRVEIKIL 219


>gi|322417908|ref|YP_004197131.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320124295|gb|ADW11855.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 169

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           + +++    F    +   P     +  I  ++       + + GHTD          N +
Sbjct: 56  VQNEKGPIKFKTGKAEVDPACDRTMTAIAAIMTDYPGFHVQVDGHTDNV---GKPEANMK 112

Query: 287 LSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           LS DRA +  + L  K GV   R+S   GF   +   ++      + NRR+D  V  
Sbjct: 113 LSQDRADAVVKYLAEKKGVDAKRLSA-KGFGDTQPIASNKTKAGQAKNRRVDFTVTK 168


>gi|169633791|ref|YP_001707527.1| putative outer membrane lipoprotein [Acinetobacter baumannii SDF]
 gi|169796445|ref|YP_001714238.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
 gi|184157625|ref|YP_001845964.1| outer membrane protein [Acinetobacter baumannii ACICU]
 gi|215483907|ref|YP_002326132.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB307-0294]
 gi|301345916|ref|ZP_07226657.1| OmpA/MotB domain protein [Acinetobacter baumannii AB056]
 gi|301512888|ref|ZP_07238125.1| OmpA/MotB domain protein [Acinetobacter baumannii AB058]
 gi|332854748|ref|ZP_08435526.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332865708|ref|ZP_08436518.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332874587|ref|ZP_08442488.1| OmpA family protein [Acinetobacter baumannii 6014059]
 gi|169149372|emb|CAM87256.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
 gi|169152583|emb|CAP01565.1| putative outer membrane lipoprotein [Acinetobacter baumannii]
 gi|183209219|gb|ACC56617.1| Outer membrane protein [Acinetobacter baumannii ACICU]
 gi|213986628|gb|ACJ56927.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB307-0294]
 gi|322507933|gb|ADX03387.1| Putative outer membrane lipoprotein [Acinetobacter baumannii
           1656-2]
 gi|323517525|gb|ADX91906.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332727834|gb|EGJ59237.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332735135|gb|EGJ66217.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332737225|gb|EGJ68151.1| OmpA family protein [Acinetobacter baumannii 6014059]
          Length = 255

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255


>gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17]
 gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17]
          Length = 465

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 107/296 (36%), Gaps = 15/296 (5%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
             + A+    N        A   I +      +++     L+        ++     + N
Sbjct: 157 QRRDALTSDLNAALAKQGDAQNQIDELTTQLTQATGQADTLTQQRDDLTATLTATQSAAN 216

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            ++   +          ++ +    ++     +    L  +T+  +S+ ++       L+
Sbjct: 217 AQQTDAQNRIAELEKQLAEANAALADARQEVRQHQSALASATEQRQSVAEQYQQAREQLA 276

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ------RN 233
            ++  +    + +  L  +++        +   +       +  ++  + D         
Sbjct: 277 LQQARSQSATETINVLEARMAQE-KAATDNLQSRLQSLSHEKESLVSRLEDGTTVIKLPE 335

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR----NIARDNWRLS 288
           + +F+  S+         L  + + L    +  ISI+GH+D+        ++   NW LS
Sbjct: 336 SIVFNSGSARIGKAGQHTLTLLADALKSFPDHLISIQGHSDSRSIAPALQSLYPTNWELS 395

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DP-MNSANRRIDILVEDRQ 342
             RA SA +VL ++G+   R+  + GFA  R  +   D      NRRI++L+   Q
Sbjct: 396 ASRAASAVRVLREAGIDPSRMQAV-GFADARPLVKEIDTVSRRKNRRIEVLLYPSQ 450


>gi|325294742|ref|YP_004281256.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065190|gb|ADY73197.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 255

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD---NWRL 287
           N  +F  +S    P+    L K+ E++        +   GHT              +W L
Sbjct: 107 NKVLFKPNSLELTPKAKEALDKVAEIIKKLPGNYQVRIEGHTSIEEPTKYLPYIHDDWDL 166

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           S+ RA +  + L+  GV+  +I  + G+ + R      +  + + NRR++I +E
Sbjct: 167 SIRRATTVAKYLVSRGVNPKKIIAV-GYGNTRPLYTWKNPILQARNRRVEIYLE 219



 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
              +      +W   ++D M++L+ FF++++ ++  D         YF 
Sbjct: 3  RKKKEECKTAPAWLTSFSDLMSLLLTFFILLYSMSTLDVTKAIKFLSYFQ 52


>gi|254302748|ref|ZP_04970106.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322940|gb|EDK88190.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 182

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD             L  + + L  + +  I I G+
Sbjct: 58  EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 114

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD   F      N  LS+ RA +    L+  G     I  I G+        +       
Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPAATNQTEAGRS 170

Query: 331 -NRRIDILVED 340
            NRR++ ++  
Sbjct: 171 KNRRVEFIISR 181


>gi|225010858|ref|ZP_03701326.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
 gi|225005066|gb|EEG43020.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
          Length = 277

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + +     +  + +SI D+    +F+  S +   +   
Sbjct: 113 RRDSVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFNTGSYVVSNKAKS 169

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
           VL+K+ +V+ +  +    + GHTD   F +    DNW LS+ RA S  ++L K  GV   
Sbjct: 170 VLEKVAKVVNNKPDFEFMVEGHTDERSFSKGDLVDNWDLSVKRATSVVRMLQKDFGVDPK 229

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           R++   G A +          S NRR  I+V  +
Sbjct: 230 RMTAA-GRAEYMPV---SSELSKNRRTRIVVLPK 259


>gi|89897844|ref|YP_514954.1| outer membrane protein [Chlamydophila felis Fe/C-56]
 gi|89331216|dbj|BAE80809.1| outer membrane protein [Chlamydophila felis Fe/C-56]
          Length = 191

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 8/162 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +R KR +     +       +  N       +  +     S         F   S  
Sbjct: 34  QDCQRPKRKKQNFAFVPLYTDEEMNQNFADSYDSKEEQLYQTSSQSVSFRNITFATDSYT 93

Query: 244 PLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              E  + +      ++       + I GHTD       A  N  L   RA +  Q L+K
Sbjct: 94  IKGEENLAILSSLVRQMQKSPKTTLYIEGHTDER---GAAAYNLALGARRANAVKQHLIK 150

Query: 302 SGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
            G+S +R+  IS +   +   +  ++     NRR +  V  R
Sbjct: 151 QGISPERLFTIS-YGKEQPINSGHNELAWQQNRRTEFKVHAR 191


>gi|260555512|ref|ZP_05827733.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
 gi|260412054|gb|EEX05351.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
          Length = 255

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255


>gi|21242231|ref|NP_641813.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107654|gb|AAM36349.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 241

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+ ++ + +  ++      L  +     +     +          + A         + +
Sbjct: 30  QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 89

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L       G+  +     I +++ D      FD   S   P+    L  +  
Sbjct: 90  YQDRQERALRERTANTGIEVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSALNGVAS 146

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    + ++ + GHTD+         N RLS +RA +  Q L   GV  +R+  + G  
Sbjct: 147 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMETM-GAG 202

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                  +      + NRR++I +
Sbjct: 203 KRYPIADNSTDAGRAQNRRVEIRL 226


>gi|52421234|ref|YP_087146.1| putative outer membrane protein [Bacteroides fragilis YCH46]
 gi|52218755|dbj|BAD51347.1| putative outer membrane protein [Bacteroides fragilis YCH46]
          Length = 212

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           +N  +F+  S     +   +L ++  V+        +I GHTD          N  LS +
Sbjct: 101 QNDILFNFDSFELSSQAQTMLNQLCVVINEIPNTKVNIIGHTDNV---GDKNYNMVLSKN 157

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    +  SGV  D I++  G         +      + NRR++I +    
Sbjct: 158 RALSVGNYMRSSGVDGDNITE-DGKGLSSPIADNKTESGRAKNRRVEIYISTPN 210


>gi|311277523|ref|YP_003939754.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
 gi|308746718|gb|ADO46470.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
          Length = 220

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSANLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV+ +RI + +G  
Sbjct: 137 VLKEYEKTAVNVVGYTDST---GSKDLNMRLSQQRADSVASSLITQGVAANRI-RTTGMG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 QANPIASNSTAEGKAQNRRVEITL 216


>gi|300870134|ref|YP_003785005.1| OmpA family outer membrane protein [Brachyspira pilosicoli 95/1000]
 gi|300687833|gb|ADK30504.1| outer membrane protein, OmpA family [Brachyspira pilosicoli
           95/1000]
          Length = 401

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 13/146 (8%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +      + DN+   V+ +T   G++I +       +FD  S     +    +  I   +
Sbjct: 265 NELNRKKIEDNLNDDVVVDTVPEGLVIRL----GEILFDTDSYTLKEDAKDTVDNIINAI 320

Query: 260 AHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             +       + GHTD +     A  N  LS  RA +    ++   +  D++    GF  
Sbjct: 321 KQTYPDREIIVEGHTDNT---GEANYNQALSEKRAKTVADYILPK-LEHDKL-SYRGFGD 375

Query: 318 HRLKIASD--PMNSANRRIDILVEDR 341
                ++D       NRR+DI+++ R
Sbjct: 376 KEPIASNDNPDGRQKNRRVDIIIKLR 401


>gi|291336864|gb|ADD96396.1| OmpA/MotB domain containing protein [uncultured organism
           MedDCM-OCT-S09-C206]
          Length = 211

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 8/214 (3%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I     +              ++        +LEK                   + +  
Sbjct: 1   MIAETLEALNEARENAGAGASEQEVLFGGIEGELEKLAASMNEASPQNGEGPGGSSQEAY 60

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++ Q+ ++      + L        V  E     + I++    +   F   ++    E  
Sbjct: 61  QKQQNASRTTEELTTALKQQIDQGLVEVEQRDDKVFITVG---SGGAFPSGTADLTEEAQ 117

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSED 307
            +L +I          I++ GHTD  P +N   RDNW L+  RA S  Q + ++G +  D
Sbjct: 118 RILDRISLAAMSPKSTITVTGHTDDVPIKNAQFRDNWDLAAGRASSVVQAIQRTGLIDGD 177

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R+S +S          +        NRRI+I + 
Sbjct: 178 RLSAVS-KGETAPLADNATAAGRSENRRIEIEIT 210


>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
 gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
          Length = 351

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           + ++ +T    +   ++ +     F   S      +   + K+   +  S  +I+I GHT
Sbjct: 217 EKIVEKTEIQQVNYELVSESFYSNFANDSYEL--ISANDIDKLIPKIKKSQGMITIIGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D+         N++LS  RA S    L+K+G+  D++  + G    +    +      + 
Sbjct: 275 DSI---GRPLYNYQLSYKRAQSVADYLIKNGIKSDQVV-VIGMGEDKPIADNLSYEGRAK 330

Query: 331 NRRIDIL 337
           NRR++++
Sbjct: 331 NRRVEVI 337


>gi|108755187|emb|CAK32579.1| outer membrane protein [uncultured organism]
          Length = 178

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           + +  +   F+             L+K    L       I++ GH D          N  
Sbjct: 63  VSEVGDRIFFEFDKYNLKAGARGTLEKQAAWLKKWPAVTITVEGHCDER---GTREYNLA 119

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           L   RA S    L+  GV+  RI  IS +   R     +++   + NRR
Sbjct: 120 LGERRANSVKDYLVALGVNPSRIKTIS-YGKERPVALGSNESAWAQNRR 167


>gi|89056405|ref|YP_511856.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88865954|gb|ABD56831.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 658

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 91/301 (30%), Gaps = 12/301 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN----KIDLSIDE 104
           + +     T  +    +    +     + +    + + +     +         D +   
Sbjct: 316 VTLIAAQGTSQELFDTVVGELDADLPAVFSLQAILPEPELEAAAAGPARFTATFDQAQGV 375

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            +        IG + Q             ++  + ++  +    R       L +  D  
Sbjct: 376 RLRGRLPGGAIGQSVQAFAAATFGAGTTDIATREVADLPQGWSIRVMAGLTALSQLEDGV 435

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +I  +           ++++   ++  +DL       ++    + +       T +   
Sbjct: 436 LTIEPDTLRLSGRTGDSELISALTRQIAEDLGPGAIFDMNVAYDEALDPVASQPTPQECE 495

Query: 225 -LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282
             I  I       FD  S+        VL +I E+L     V + I GHTDA        
Sbjct: 496 ARIRDIQDETKITFDPGSTEINRAAGEVLDEIAEILPDCMHVSMEIGGHTDAQ---GGET 552

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            N  LS  RA +    L+  GV    +    G+   +    ++  +    NRRI+  +  
Sbjct: 553 MNLNLSQSRANAVLNGLLARGVLVSNL-AAQGYGESQPIADNETEDGREQNRRIEFRLLA 611

Query: 341 R 341
            
Sbjct: 612 D 612


>gi|16124456|ref|NP_419020.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|221233140|ref|YP_002515576.1| outer membrane protein [Caulobacter crescentus NA1000]
 gi|13421324|gb|AAK22188.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|220962312|gb|ACL93668.1| outer membrane protein [Caulobacter crescentus NA1000]
          Length = 226

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 11/147 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    +         GV+       I++ +        F    S   P    VL  + 
Sbjct: 84  NYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVT---FAVDRSDVQPPFTRVLDDVA 140

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314
             L    +    + GH D+         N  LS  RA +    L    GV  DR+  ++G
Sbjct: 141 RTLNAYPQTTIDVVGHADS---SGPDDYNQTLSERRASAVAGYLTGPGGVLVDRVF-VAG 196

Query: 315 FAHHRLKIASDPM--NSANRRIDILVE 339
                    +      + NRR++I++ 
Sbjct: 197 MGERAPIADNATADGRAQNRRVEIILR 223


>gi|332293158|ref|YP_004431767.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171244|gb|AEE20499.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 236

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 72/207 (34%), Gaps = 17/207 (8%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +   K ++   +          +        E   +          +    ++   A++
Sbjct: 30  ANNKQKGAVIGATGGAILGAIIGNNAGKGGNGELGAVIGGVVGGGAGVLIGNKMDKQAQQ 89

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I   L G   + I  G++             D+ +   FD +       +  +L K+  +
Sbjct: 90  IEQELPGATVERIDDGIVVT----------FDENSGVYFDTAKYNVNTASQTLLNKLSNI 139

Query: 259 LAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +    +   +  GHTD+        +N  LS +RA +    ++ +G+S  R + +  +  
Sbjct: 140 MKEYNQTNVVVAGHTDSV---GSDTNNMTLSQNRANAVTNYMVGTGLSAGRFTTV-WYGE 195

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
            +   ++D     + NRR+ + +   +
Sbjct: 196 TQPAASNDTAEGRAQNRRVQLAIVPNE 222


>gi|319955585|ref|YP_004166852.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319424245|gb|ADV51354.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 275

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D+    NK +      LSK     +   K ++D      S        +    V     +
Sbjct: 82  DITVMSNKTKEKMKATLSKVDPALLANAKTMEDSINLAISYNLKKSIADDEDDVNINIDK 141

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280
           T ++I+I D+    +F+  S     +   +L+KI +V+     + + + GHTD+   +  
Sbjct: 142 TVVMINISDKL---LFNSGSYTVSNKANNILKKIADVINSEPSMEVMVEGHTDSRTIQTP 198

Query: 281 -ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
             +DNW LS+ RA S  ++L K   V+ +++   SG +     + +D     S NRR  I
Sbjct: 199 MFQDNWDLSVKRATSVVRILQKKYNVAPEKLIA-SGRSSFLPLVENDSKENRSKNRRTRI 257

Query: 337 LV 338
           ++
Sbjct: 258 VI 259


>gi|126734135|ref|ZP_01749882.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
 gi|126717001|gb|EBA13865.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
          Length = 536

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 23/221 (10%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           L+     E      T  ++    L +    E+     E      L  E        + L 
Sbjct: 326 LAEEADREAQVQIETLGAQLNTALARVVSEERQRRTLEEAERIRLEAEAERLAAEAEDLA 385

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
                    L  ++       V  +              +  +F   S+   P     + 
Sbjct: 386 RFKSTFFGELRQILEGQDRIRVEGDRFIFN---------SEVLFQPGSATLSPAGEAEIA 436

Query: 254 KIGEVLAH--------STEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVL-MKS 302
            I ++L             VI + GHTD  P    +   DNW LS  RA S  + +    
Sbjct: 437 NIADILRSIAADIPEGIDWVIRVDGHTDNVPIGSNSRFADNWELSQARALSVVRFMSEDL 496

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           G+   R+   +GF   +     +   +   NRRI++ + +R
Sbjct: 497 GIDPRRL-AANGFGEFQPLNPLNTAEARAQNRRIELKLTER 536


>gi|115352534|ref|YP_774373.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115282522|gb|ABI88039.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 232

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +   S+ G+TD++     A+ N  LS +
Sbjct: 120 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVIGYTDST---GSAQLNQTLSQN 176

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 177 RAQSVVNALAQRGVAGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 229


>gi|259417844|ref|ZP_05741763.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346750|gb|EEW58564.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 221

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +++    + L        +    T   +++S+ +      F   SS         L+K+ 
Sbjct: 79  RELDKQEAELRQSLDNDSISIVNTGDRLIVSLPNDLT---FATDSSAISSVVRSDLRKVA 135

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L      V+ + GHTD+      A  N+ LS  RA +    +   GVS +R+ +I G 
Sbjct: 136 GSLQRYPGSVVQVIGHTDSD---GAASYNYSLSERRANAVADEIAAGGVSYNRM-RIIGR 191

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +   ++      + NRR++I++
Sbjct: 192 GEDQPVASNLTAEGKARNRRVEIVI 216


>gi|91783726|ref|YP_558932.1| hypothetical protein Bxe_A2088 [Burkholderia xenovorans LB400]
 gi|91687680|gb|ABE30880.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 443

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  +       ++    R   MF   ++        ++ KI   +A     
Sbjct: 310 LKNEIAAGTVSVDEDAHHSSVTF---RGDSMFPPGAAAVKTSMTPLITKIAGEIAKVPGK 366

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ G+TD  P ++     N  LS +RA    Q+L  +GV   R+  + G         +
Sbjct: 367 VTVLGYTDNVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVRLEAV-GRGDADPIGDN 425

Query: 325 DP--MNSANRRIDILV 338
                 + NRR++I V
Sbjct: 426 TTVQGRAQNRRVEITV 441


>gi|146300076|ref|YP_001194667.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146154494|gb|ABQ05348.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 727

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 76/273 (27%), Gaps = 12/273 (4%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            +   T   G+ D+Q+   + +    +       T                  +      
Sbjct: 454 KQFKDTDGDGVIDKQDACRKVAGPVENNGCPWPDTDKDGVFDKDDACPDTAGPKENKGCP 513

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
           +  +   S               +       +   +   +      ++  +   K    L
Sbjct: 514 WKDSDGDSLLDNVDACPAVAGPVENKGCPWPDTDGDGILDKDDACPNEAGLAENKGCPSL 573

Query: 193 QDLAK-KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP----E 247
                  +       +                 L  +  +  +  F    +        E
Sbjct: 574 DADKDGVLDKDDDCPLVYGPADNKGCPKVTKETLAQLKMEAKSIFFTTGKATLSDAKMGE 633

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           T   L  I E+L +      +I GHTD       A+ N +LS  RA     +L++ GV+ 
Sbjct: 634 TSGRLDAIKEILKNYPNAKFAINGHTDNV---GNAKVNQKLSEQRAKVVMDLLIEKGVNP 690

Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             ++   G+   +   ++      + NRR +I+
Sbjct: 691 ANLTS-KGYGASKPVKSNKTASGRAENRRTEIV 722


>gi|76809643|ref|YP_335000.1| OmpA family domain-containing protein [Burkholderia pseudomallei
           1710b]
 gi|226198194|ref|ZP_03793765.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|254190435|ref|ZP_04896943.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254259878|ref|ZP_04950932.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254300689|ref|ZP_04968134.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|76579096|gb|ABA48571.1| OmpA family domain protein [Burkholderia pseudomallei 1710b]
 gi|157810473|gb|EDO87643.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|157938111|gb|EDO93781.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|225929714|gb|EEH25730.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|254218567|gb|EET07951.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 310

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
                   + G+  +  P           +        S      +T  +        + 
Sbjct: 34  PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +   Q            ++ +    +T    S N ++          K        +
Sbjct: 94  ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153

Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242
           +    +  +      +A ++   +    T + G+ +S  +Q          T  F+  S+
Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213

Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+   +L ++   LA  +     I GHTD          N  LS  RA +    L+ 
Sbjct: 214 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            G++  +++  +G    +    +D     + NRRI+ 
Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306


>gi|325286110|ref|YP_004261900.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321564|gb|ADY29029.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 372

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F+ + +  L  +   +  +  +L ++ +  I I GHTDA         N  LS  R
Sbjct: 265 KNVLFEFNKADLLTASEEEINVLTTILRNNNKLSIEIYGHTDAV---GSKERNLELSNQR 321

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L+ SG+ E+R+  I G+   +    +        NRR++  + +
Sbjct: 322 AKAVASYLIDSGIDENRVKWI-GYGSSKPVADNTTEEGRTQNRRVEFKMLE 371


>gi|66770081|ref|YP_244843.1| hypothetical protein XC_3783 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|77747955|ref|NP_639058.2| hypothetical protein XCC3712 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|188993294|ref|YP_001905304.1| hypothetical protein xccb100_3899 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|66575413|gb|AAY50823.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735054|emb|CAP53266.1| OmpA family protein [Xanthomonas campestris pv. campestris]
          Length = 215

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      K +   L+  +A            R  ++   I  R + +
Sbjct: 43  QLSSRLDDEVKQRQAEAQRRKTLEQALAAPLAAG----------RVTLVNGRIGIRGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSL 289
           F  +S    PE   VL+ +   L+       E++ I G TD  P         DNW LS 
Sbjct: 93  FALNSDQLQPEGREVLKSLAAPLSEYLVSREEILMISGFTDDRPVLDSNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADETRRAKNRRVEI 200


>gi|39995916|ref|NP_951867.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39982680|gb|AAR34140.1| OmpA domain protein [Geobacter sulfurreducens PCA]
 gi|298504930|gb|ADI83653.1| OmpA domain porin [Geobacter sulfurreducens KN400]
          Length = 466

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 13/151 (8%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +  K+ +  +  ++   +    +       + I++  Q     FD       P+    +
Sbjct: 320 TEAGKQRNRRIEAIIDCALEDPKVIAALPDRLCIALKVQ-----FDTDKWDIKPQYRGEI 374

Query: 253 QKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
            K+G+ +  + T    I GHTD       A  N +LSL RA +    L++  G+   R+S
Sbjct: 375 AKVGDFMTRNPTTTAIIEGHTDRV---GTADHNMKLSLRRAEAVVNYLVEHFGIERSRLS 431

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              G+   R    +        NRRI+ +++
Sbjct: 432 A-KGYGFSRPIAYNSTAEGRALNRRINAIID 461


>gi|295681046|ref|YP_003609620.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1002]
 gi|295440941|gb|ADG20109.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1002]
          Length = 444

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 51/137 (37%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     VL E   +   +     R   +F    S   PE   VL ++ + +A     
Sbjct: 311 LKDEIARGQVLVEENGSSSRVVF---RGDYVFLPGQSRIRPELDPVLSRVAQEVARVGGK 367

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GHTD  P       DN  LS  RA     V+   GV   RI  I G    +    +
Sbjct: 368 VTVTGHTDNQPIHTAEFPDNQVLSEKRAAFVADVMKAHGVPAIRIVAI-GKGDIQPVADN 426

Query: 325 DPMNS--ANRRIDILVE 339
                   NRR+++ V 
Sbjct: 427 TTAEGRSRNRRVEVFVT 443


>gi|320538203|ref|ZP_08038098.1| OmpA family protein [Treponema phagedenis F0421]
 gi|1399286|gb|AAB03251.1| MotB [Treponema phagedenis]
 gi|320145020|gb|EFW36741.1| OmpA family protein [Treponema phagedenis F0421]
          Length = 238

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 11/163 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           AM   ++ + L   +   +S    +     +   +   G++IS+        F + SS  
Sbjct: 76  AMPSLEKGKKLGTALKKAVSLFAPEIKTNKIAVTSDERGLVISLAAD---AFFHRDSSDL 132

Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299
              ET   L  I   L+          + GHT  S        D+W+LS  RA +    L
Sbjct: 133 DIEETRESLLHIARFLSDKELEGRRFRVEGHTSTSEVAASKEIDDWQLSSQRAINVLHYL 192

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              G  E R   ++G+A  R K ++D       NRR+DI++ D
Sbjct: 193 TDFGAEESRF-SVAGYADTRPKASNDTAEGRAYNRRVDIIILD 234


>gi|45656490|ref|YP_000576.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45599725|gb|AAS69213.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 475

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                 A      V    T  GI IS+    N+ +FD +SS    E  + L++I  VL  
Sbjct: 340 EEEDNQAAPEGSPVEIRRTEEGIAISL----NSVLFDHNSSELKQEAKLELKRIASVLKK 395

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
             +  I I GHTD          N +LS +RA S  + L  + G+ E R+    G+   +
Sbjct: 396 YADREIRISGHTDN---SGGEEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSK 451

Query: 320 LKIASDP--MNSANRRIDILV 338
               +        NRR+DI +
Sbjct: 452 PIADNSTIQGRQKNRRVDITI 472


>gi|16802728|ref|NP_464213.1| hypothetical protein lmo0686 [Listeria monocytogenes EGD-e]
 gi|224498768|ref|ZP_03667117.1| hypothetical protein LmonF1_03321 [Listeria monocytogenes Finland
           1988]
 gi|224502009|ref|ZP_03670316.1| hypothetical protein LmonFR_05752 [Listeria monocytogenes FSL
           R2-561]
 gi|254830323|ref|ZP_05234978.1| hypothetical protein Lmon1_03142 [Listeria monocytogenes 10403S]
 gi|254900078|ref|ZP_05260002.1| hypothetical protein LmonJ_09695 [Listeria monocytogenes J0161]
 gi|255026595|ref|ZP_05298581.1| hypothetical protein LmonocytFSL_10100 [Listeria monocytogenes FSL
           J2-003]
 gi|284801016|ref|YP_003412881.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
 gi|284994158|ref|YP_003415926.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
 gi|5305456|gb|AAD41660.1| motility protein [Listeria monocytogenes]
 gi|16410075|emb|CAC98764.1| motB [Listeria monocytogenes EGD-e]
 gi|284056578|gb|ADB67519.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
 gi|284059625|gb|ADB70564.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
          Length = 275

 Score = 95.8 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q       I     +    +       D      + K+ + +    +         +  
Sbjct: 47  EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            +L  + +++++   K+I S ++    +N+   +  + +  G+LI+I D     +F   S
Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 160

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298
           +        + ++IGE+ A     +   + GHTD  P        NW LS+ RA +  + 
Sbjct: 161 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220

Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264



 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +    +         K   +   +    +         LS  K    K    L    K
Sbjct: 123 QIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGK 182

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226
                +     DN+       ++   + +
Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211


>gi|153872253|ref|ZP_02001198.1| outer membrane protein OprF [Beggiatoa sp. PS]
 gi|152071282|gb|EDN68803.1| outer membrane protein OprF [Beggiatoa sp. PS]
          Length = 175

 Score = 95.8 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD         +  +L++  E L    ++  + I GHTD+      A  N  LS  RA +
Sbjct: 71  FDTDCPAIKANSYTLLREYAEALKTGLASVKLEIGGHTDS---SGPAYYNLTLSKKRAQA 127

Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
               L+    V ++R+  + G+   +   ++      + NRR++  V  
Sbjct: 128 VKDFLVFAYAVEDNRLI-VKGYGETQPIASNRTRDGQAKNRRVEFKVIR 175


>gi|91226490|ref|ZP_01261239.1| putative lipoprotein [Vibrio alginolyticus 12G01]
 gi|91189122|gb|EAS75403.1| putative lipoprotein [Vibrio alginolyticus 12G01]
          Length = 219

 Score = 95.8 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 15  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRQHALIGAAAGGATGAG 74

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  +      L  ++   N   F  SS          L+ 
Sbjct: 75  VGYYFDQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 132

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-R 188

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+       ++        NRR++I + 
Sbjct: 189 GYGERNPICSNQTSEGRACNRRVEIQIL 216


>gi|224370810|ref|YP_002604974.1| OmpF [Desulfobacterium autotrophicum HRM2]
 gi|223693527|gb|ACN16810.1| OmpF [Desulfobacterium autotrophicum HRM2]
          Length = 213

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD  SS   P     L ++ +VL    +  I + GHTD+   +   + N  LS  RA +
Sbjct: 112 FFDFDSSTLKPGAYSELDRVAKVLRDFPQTRIRVEGHTDS---KGTDQYNMLLSQRRAQA 168

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
               L++ GV   R+  I GF   +   ++D     NRR++I++
Sbjct: 169 VTDALVQRGVDPMRMESI-GFGESQPVSSND---GDNRRVNIVI 208


>gi|110833095|ref|YP_691954.1| hypothetical protein ABO_0234 [Alcanivorax borkumensis SK2]
 gi|110646206|emb|CAL15682.1| Flagellar motor protein [Alcanivorax borkumensis SK2]
          Length = 213

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 68/179 (37%), Gaps = 24/179 (13%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                L +EK   +  ++R   L + ++  L+          +                 
Sbjct: 43  ELSQSLEQEKAKRLAEEQRRMALEEALADPLASGRVTFNNGRIGI--------------S 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFR---NIARDNW 285
            + +F  +S    PE   +L  + + L        +++ + G TDA P         DNW
Sbjct: 89  GSVLFQLNSDRLQPEGKALLSDLVKPLQVFLSQHDDMLMVSGFTDALPINRGNGRYADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            LS  RA +  + L++ G+  D++   + F  ++    +D     + NRR+++    RQ
Sbjct: 149 GLSAQRALTVTRTLIEQGMPADQVFAAA-FGDNQPVAPNDDADSRARNRRVELTTVPRQ 206


>gi|152985769|ref|YP_001345545.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
 gi|150960927|gb|ABR82952.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
          Length = 449

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  D   + V  E      +++I       +F  +S+    E   +L +I + L      
Sbjct: 312 LAEDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368

Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + GH+D  P        NW+LS  RA     +L  +     R +   G +       +
Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGEAGRFTA-EGRSDTEPVATN 427

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I V
Sbjct: 428 ASAEGRARNRRVEITV 443


>gi|332828855|gb|EGK01538.1| hypothetical protein HMPREF9455_02070 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 290

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   + + L+  ++ + ++ +  +  +  + IS+ D     ++   S     
Sbjct: 115 EAKNKSDSLNLVMVNNLTRSLSRSEMQDLDIKVLKGVVYISLADNM---LYRSGSYEISE 171

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303
           +   +L KI +++    +    + G+TD  P      R+NW LS  RA S  Q L  + G
Sbjct: 172 KAGEILSKIAKIILDYKDYDVLVEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNNYG 231

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           V   R++   G   +    ++  +     NRR  I++  +
Sbjct: 232 VDPKRMTAG-GRGEYNPVASNSTIEGKALNRRTQIIITPK 270


>gi|167838594|ref|ZP_02465453.1| hypothetical protein Bpse38_18947 [Burkholderia thailandensis
           MSMB43]
          Length = 391

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMF 237
           S +    +    R+   A      L  L+AD      V  +       ++    R   MF
Sbjct: 230 SADVQQRIAAIARMTPPAAPAELRLKALLADEIAAGTVSVDEDARHSSVTF---RGDAMF 286

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAY 296
              ++        +++KI   +A     + + G+TD  P ++     N  LS +RA    
Sbjct: 287 PPGAAGVNATMGPLVKKIAAEIAKVPGKVIVLGYTDNQPIKSRQFASNEALSEERATQVM 346

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 347 QMLQSAGVPASRLEAL-GKGDANPIGDNRTPQGRALNRRVEITVAR 391


>gi|49188511|ref|YP_025325.1| OmpA [Pseudomonas alcaligenes]
 gi|5123490|gb|AAD40344.1|U88088_22 OmpA [Pseudomonas alcaligenes]
          Length = 220

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 10/147 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                 + L       GV  E     I+I +        F    +   P     L ++  
Sbjct: 74  YADKQEAELREQMKGSGVQVERQGDEIVIVM---PGAITFATGKAEIQPNFANTLNQLAG 130

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
              +  +    + GHTD+         N  LS  RA S  Q L  +GV  DRI ++ G  
Sbjct: 131 SFRNYPDSRLIVTGHTDSV---GSYEANELLSQRRAQSVAQFLRGNGVQTDRI-EVIGAG 186

Query: 317 HHRLKIASDPM--NSANRRIDILVEDR 341
            ++   ++      + NRR++I +  R
Sbjct: 187 PNQPVASNATAEGRAQNRRVEIKLAPR 213


>gi|114320554|ref|YP_742237.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226948|gb|ABI56747.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 266

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 70/209 (33%), Gaps = 9/209 (4%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +S  +E  + +               D   S +  +     P+    +  +        +
Sbjct: 32  SSLDAEKYRLAAQSIRAAFGPQLTEGDPSPSPSPIDFDGGSPVDPSLLEDL-LDAVPDPI 90

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +  +     L  +     +  E     +LI   ++     F   S+      + +L  +
Sbjct: 91  DQITAELQEQLEGELGEGLLEVERLDENVLIRFPEKAA---FPSGSADVNASFLPILHTV 147

Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKIS 313
             VLA     I + GHTD  P      R NW LS  RA     +L+++  +   R     
Sbjct: 148 AGVLAGQGGTIRVSGHTDDVPIDTERFRSNWELSTARATEVVHLLLEAAPIEPGRFIA-Q 206

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVED 340
           G A  R    +      + NRR+D+L+  
Sbjct: 207 GHADTRPLRPNTSPENRARNRRVDVLITG 235


>gi|167908679|ref|ZP_02495884.1| hypothetical protein BpseN_41039 [Burkholderia pseudomallei NCTC
           13177]
          Length = 395

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 285 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 344

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 345 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 395


>gi|289679931|ref|ZP_06500821.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
          Length = 190

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 12/181 (6%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGIL 225
             +  N  L      K+   +++ +L     K++S        ++ +  +    T  G++
Sbjct: 12  AREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLV 71

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           +++ D     +FD   +         + K+ + L  +   V+ I G+TD++      +DN
Sbjct: 72  MTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDN 124

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
            +LS DRA +   VLM  GV E RI  + G+       A+  +   + NRR++I+  D +
Sbjct: 125 LKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTFERGRAQNRRVEIVFSDEK 183

Query: 343 G 343
           G
Sbjct: 184 G 184


>gi|15836965|ref|NP_297653.1| hypothetical protein XF0363 [Xylella fastidiosa 9a5c]
 gi|9105193|gb|AAF83173.1|AE003888_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 242

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                    L       G+  +     I +++ D      FD   S+  P+    L+ + 
Sbjct: 91  NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 147

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L    + +I + G+TD+         N RLS DRA +    L   GV  +R+ +ISG 
Sbjct: 148 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAGQGVQRERM-EISGM 203

Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338
                   +        NRR++I +
Sbjct: 204 GKRYPIADNSTEAGRSKNRRVEIHL 228


>gi|47095252|ref|ZP_00232863.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
 gi|258611605|ref|ZP_05234030.2| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
 gi|258612097|ref|ZP_05267393.2| chemotaxis protein MotB [Listeria monocytogenes F6900]
 gi|293596468|ref|ZP_05261381.2| chemotaxis protein MotB [Listeria monocytogenes J2818]
 gi|47016323|gb|EAL07245.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
 gi|258601756|gb|EEW15081.1| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
 gi|258608279|gb|EEW20887.1| chemotaxis protein MotB [Listeria monocytogenes F6900]
 gi|293589306|gb|EFF97640.1| chemotaxis protein MotB [Listeria monocytogenes J2818]
          Length = 289

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q       I     +    +       D      + K+ + +    +         +  
Sbjct: 61  EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 120

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            +L  + +++++   K+I S ++    +N+   +  + +  G+LI+I D     +F   S
Sbjct: 121 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 174

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298
           +        + ++IGE+ A     +   + GHTD  P        NW LS+ RA +  + 
Sbjct: 175 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 234

Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 235 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278



 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 76/224 (33%), Gaps = 1/224 (0%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              + +E  + + + K+       +   +W I Y+D +T+L+A F+V++  ++ D    +
Sbjct: 2   EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +   F    +     ++    ++  P+  + N +  +++E   K   + +  +      
Sbjct: 62  QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAA 121

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             + +N     +  +Q +    +         K   +   +    +         LS  K
Sbjct: 122 LLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGK 181

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
               K    L    K     +     DN+       ++   + +
Sbjct: 182 REIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSV 225


>gi|311104068|ref|YP_003976921.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
 gi|310758757|gb|ADP14206.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
          Length = 215

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I    +   FD   +   P  + VL  +   L    E    + GHTD+
Sbjct: 92  VVEMPDGSLKVNI---PSGVSFDTDKTQLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 148

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N  LS++RA S    L K GV+  R+  + G   +     +        NR
Sbjct: 149 T---GALAHNQTLSVNRAKSVTDYLGKQGVAAGRL-TVEGRGPNDPIGDNATAEGRALNR 204

Query: 333 RIDILV 338
           R++I +
Sbjct: 205 RVEIYL 210


>gi|170735277|ref|YP_001774391.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169821315|gb|ACA95896.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 228

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +I  P  +  L K+           + I G+TD          N RLS  RA + 
Sbjct: 125 FDFNQAILTPAAMQQLDKVIANGKGMTFGTVGISGYTDGL---GTDTYNRRLSEQRAQAV 181

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              L   G++  R  +I G+   R    ++     + NRR++I++
Sbjct: 182 ASYLQAHGLNARRF-EIHGYGAERPVALNNTALGRAQNRRVEIVL 225


>gi|326336372|ref|ZP_08202543.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691546|gb|EGD33514.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 231

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 59/142 (41%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  D+++   F+ + +    E   +L K+  VL    
Sbjct: 83  QAKKIEEEIPGAEVKRVDDGIVVTF-DEKSGVTFEFNKATLTSEAQTILNKMVSVLKEYP 141

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  + + GHTD++     A  N  LS  RA +       +G++  R +    F   +   
Sbjct: 142 DTNVIVAGHTDST---GKAAYNMTLSEKRAKAVTNFFTTNGLNASRFTT-KWFGATQPAY 197

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            +      + NRR+++++   +
Sbjct: 198 DNSTAEGRAKNRRVNVVIVPNE 219


>gi|312963881|ref|ZP_07778352.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
 gi|311281916|gb|EFQ60526.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
          Length = 429

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 14/176 (7%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           N      +P  + ++ +A  +      LA  ++  +           V  E      +++
Sbjct: 261 NIHALGEIPVQAIDRPVAQPQVIERPRLAGFLAEEIK-------AGRVAVEDKVDRSVVT 313

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWR 286
           I       +F  +S+  + +   ++ +I + +      + + GH+D  P        NW 
Sbjct: 314 IRGDE---LFASASASIVDDYQPLMLRIADAIRKVKGQVRVTGHSDNRPIATLRFPSNWA 370

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           LS  RA S  ++L       DR S   G +       +      + NRR++I V  
Sbjct: 371 LSEARAKSVLEILAAKTGQADRFSA-EGRSDTEPLATNSTAEGRARNRRVEITVLA 425


>gi|86157810|ref|YP_464595.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85774321|gb|ABC81158.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 259

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 8/177 (4%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226
           +   +    P  +      +  + ++ L K+I   +   V +      V        + +
Sbjct: 71  DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DN 284
            +        FD   +   P+ + +L  I   L      + + GHTD +P     R   N
Sbjct: 131 RLAATE---FFDPGQAALRPQALAMLDAIAAELVPLARPLRVEGHTDETPVGGGGRWISN 187

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           W LS  RA +    L ++  +        G              +   NRR+++++E
Sbjct: 188 WELSAARAATVVGYLEQAHAARPAGLSAVGLGSAHPLSTDATPEAHERNRRVELVLE 244



 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 48/144 (33%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + YADFMT+L AFF+VM+ ++  D+       +          T   G     + P  
Sbjct: 16  WLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPS 75

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                   +      ++     +    +++    +         S   E  + ++   + 
Sbjct: 76  EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135

Query: 153 KGKDLCKSTDLEKSINKEENYFLP 176
           +  D  ++    +++   +     
Sbjct: 136 EFFDPGQAALRPQALAMLDAIAAE 159


>gi|46906937|ref|YP_013326.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226223317|ref|YP_002757424.1| motility protein (flagellar motor rotation) MotB [Listeria
           monocytogenes Clip81459]
 gi|254993370|ref|ZP_05275560.1| motility protein (flagellar motor rotation) MotB [Listeria
           monocytogenes FSL J2-064]
 gi|255522318|ref|ZP_05389555.1| motility protein (flagellar motor rotation) MotB [Listeria
           monocytogenes FSL J1-175]
 gi|46880203|gb|AAT03503.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225875779|emb|CAS04482.1| Putative motility protein (flagellar motor rotation) MotB [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|328467255|gb|EGF38335.1| chemotaxis protein MotB [Listeria monocytogenes 1816]
 gi|328475649|gb|EGF46398.1| chemotaxis protein MotB [Listeria monocytogenes 220]
          Length = 275

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 37  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+++   +  + +  G+LI+I D    
Sbjct: 97  EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 153

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264



 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 63/173 (36%), Gaps = 3/173 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K     +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
           Q +     +  +    K   K +D    I   ++      S E     +   +
Sbjct: 123 QIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172


>gi|313204239|ref|YP_004042896.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312443555|gb|ADQ79911.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 410

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 24/184 (13%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D   +   +       L          K +LQ   K I        ++     VL +  
Sbjct: 247 EDENAANKAKIQKLEADLQAANAERAADKAKLQADLKDIPQAKVSADSNQDALTVLLDVN 306

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFR 278
                           F+  SS     +  +L  +  VL  +       I GHTD     
Sbjct: 307 ----------------FEFGSSELSSRSRAILDDVALVLKVNKAWSKLLISGHTDNI--- 347

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              + N +LS +RA    + L+  G+S   +  ++GF   + K  ++       NRR ++
Sbjct: 348 GGDKANKKLSEERAAGVKKYLISKGISAS-VIDVAGFGKEKPKTTNETKEGRYKNRRAEL 406

Query: 337 LVED 340
           ++E 
Sbjct: 407 VIEK 410


>gi|260909380|ref|ZP_05916088.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636472|gb|EEX54454.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
          Length = 280

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 9/160 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + K +   L   +++ L+  ++   +K V     +  + IS+ D     ++   S     
Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVRVLKGVVYISLADNM---LYKSGSYEIND 165

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSG 303
                L KI +++    +    + G+TD  P      R+NW LS  RA S  Q L  + G
Sbjct: 166 RAAETLSKIAKIIMDYQDYDVLVEGNTDNVPINRENIRNNWDLSCLRASSVVQYLQTRYG 225

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           V+  R++   G         +        NRR  I++  +
Sbjct: 226 VNPKRLTAG-GRGEFNPVATNGTEVGKQRNRRTQIIITPK 264


>gi|255023068|ref|ZP_05295054.1| motility protein (flagellar motor rotation) MotB [Listeria
           monocytogenes FSL J1-208]
          Length = 275

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 37  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+++   +  + +  G+LI+I D    
Sbjct: 97  EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 153

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 214 AVNFMEAIIQENNEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264



 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 63/173 (36%), Gaps = 3/173 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K     +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
           Q +     +  +    K   K +D    I   ++      S E     +   +
Sbjct: 123 QIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172


>gi|258611826|ref|ZP_05242458.2| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
 gi|293596186|ref|ZP_05229035.2| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
 gi|293596895|ref|ZP_05265393.2| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
 gi|300764498|ref|ZP_07074491.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
 gi|258606459|gb|EEW19067.1| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
 gi|293583586|gb|EFF95618.1| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
 gi|293593262|gb|EFG01023.1| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
 gi|300514852|gb|EFK41906.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
 gi|332311111|gb|EGJ24206.1| Chemotaxis protein MotB [Listeria monocytogenes str. Scott A]
          Length = 289

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+   K+++++ N    +     + +             ++       +  +K++   
Sbjct: 51  ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 110

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +K+   A+ +K+  + +        S + A+++   +  + +  G+LI+I D    
Sbjct: 111 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 167

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291
            +F   S+        + ++IGE+ A     +   + GHTD  P        NW LS+ R
Sbjct: 168 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 227

Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           A +  + +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 228 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 69/188 (36%), Gaps = 3/188 (1%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              + +E  + + + K+       +   +W I Y+D +T+L+A F+V++  ++ D    +
Sbjct: 2   EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +   F    +     ++    ++  P+  + N +  +++E   K     +  +      
Sbjct: 62  QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAA 121

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             + +N     +  +Q +     +  +    K   K +D    I   ++      S E  
Sbjct: 122 LLKKQNEEKIEAFKKQIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELT 178

Query: 184 LAMKRKKR 191
              +   +
Sbjct: 179 AGKREIAK 186


>gi|330946399|gb|EGH47480.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 213

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGIL 225
             +  N  L      K+   +++ +L     K++S        ++ +  +    T  G++
Sbjct: 35  AREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLV 94

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           +++ D     +FD   +         + K+ + L  +   V+ I G+TD++      +DN
Sbjct: 95  MTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDN 147

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++I+  D +
Sbjct: 148 LKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEIVFSDEK 206

Query: 343 G 343
           G
Sbjct: 207 G 207


>gi|307721192|ref|YP_003892332.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306979285|gb|ADN09320.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
          Length = 259

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                 + SE    L  +  + +   + E      L    I        + +  ++ +  
Sbjct: 38  SSMDAKKISEAIGSLSGAMSVLEGGTQTEISKKRMLEATPIDIQDETSEIVNRVQQAAGD 97

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAH 261
            + ++       +  +  + G +I +     T +F+  S+     + ++ L++I  ++  
Sbjct: 98  ANEMMEKTQSPAITIKEAQDGFVIKL---PATLLFNPGSATIENQDALLFLKRITLIIQE 154

Query: 262 STEVI--SIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
               +   ++GHTD +     +  +DNW LS  RA +    L+  GV   R+S  +GFA 
Sbjct: 155 LPNDMLVDVQGHTDNTGPGANSPYKDNWELSTARALAVLHELILDGVDPARMSA-TGFAQ 213

Query: 318 HRLKIASDPM--NSANRRIDI 336
           ++    +        NRR+++
Sbjct: 214 YQPIATNATATGREKNRRVEL 234



 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +    L +W   + D M++L+ FF+++  +++ D           +     L   
Sbjct: 3   KQKCPECEECLPAWLAAFGDLMSLLLCFFVLLLSMSSMDAKKISEAIGSLSGAMSVLEGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           ++    ++   E +        I +  ++    ++  + +  +  ++ ++    +  +Q 
Sbjct: 63  TQTEISKKRMLEATPI-----DIQDETSEIVNRVQQAAGDANEMMEKTQSPAITIKEAQD 117

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDL 163
               K   T     G    ++ D 
Sbjct: 118 GFVIKLPATLLFNPGSATIENQDA 141


>gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
 gi|161323983|gb|EDP95316.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
          Length = 347

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    ++  ++ +I ++L  +    ISI GHTD          N +LS +RA S 
Sbjct: 246 FDTGKSRIKADSYEIISEITKMLKTNPNLKISIEGHTDN---AGDESYNMKLSKNRAKSV 302

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L+  G+ E R+    GF   +    +      + NRR+++
Sbjct: 303 LMALVDEGIDESRLKS-DGFGQTKPIGDNTTDKGKAKNRRVEL 344


>gi|242313779|ref|ZP_04812796.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|242137018|gb|EES23421.1| OmpA family protein [Burkholderia pseudomallei 1106b]
          Length = 558

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|167826676|ref|ZP_02458147.1| hypothetical protein Bpseu9_23575 [Burkholderia pseudomallei 9]
          Length = 390

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 280 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 339

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 340 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 390


>gi|313675126|ref|YP_004053122.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941824|gb|ADR21014.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 699

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 7/145 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            T++    +        E     +            F+ +SS     +   L ++ +++ 
Sbjct: 554 QTINEETGEIEEDSKGVELKLQPLAKDANLTLKDIYFESNSSALFESSFEELDRVIKLMK 613

Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +   I  HTD       A  N RLS +RA S    +  + ++E R+    G+   +
Sbjct: 614 SYPSMKIEIAAHTDDV---GSAAYNTRLSQERANSVISYITGNSIAEGRLIS-KGYGESK 669

Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342
             +A+D     + NRR+++ + D Q
Sbjct: 670 PVVANDSEENRAKNRRVELKILDIQ 694


>gi|281179819|dbj|BAI56149.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 550

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 ERIRQPVLRAIRDWRPPEQKMDVTASLPVQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 356

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            I +       +FD  SS         L  + E L  S E + +I+G+TD+   +  A  
Sbjct: 235 QIVLPALTVISLFDFDSSELTHSGS--LAPVIERLKQSPEAIANIKGYTDS---KGNATY 289

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           N  LS  RA +    L+ +G+  ++I ++ G+      + +D       NRR+ I ++ 
Sbjct: 290 NQALSERRAQAVADYLIAAGIKPEQI-EVHGYGEQFPLMKNDTPEHRHENRRVLIHIQS 347


>gi|262394500|ref|YP_003286354.1| outer membrane protein [Vibrio sp. Ex25]
 gi|262338094|gb|ACY51889.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 222

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 18  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRQHALIGAAAGGATGAG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  +      L  ++   N   F  SS          L+ 
Sbjct: 78  VGYYFDQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 136 VARILVEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-R 191

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+       ++        NRR++I + 
Sbjct: 192 GYGERNPICSNQTSEGRACNRRVEIQIL 219


>gi|254428132|ref|ZP_05041839.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196194301|gb|EDX89260.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 212

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 15/207 (7%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
           +     +     +                      + ++     +++ + LA++      
Sbjct: 5   HDSDAQASPVWAIFSDLMAALVGILVLLLVWVIGIQLELSQSLEQEKAKRLAEEQRRMAL 64

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---- 260
                + +           I IS      + +F  +S    PE   +L  + + L     
Sbjct: 65  EEALADPLASGRVTFHNGRIGIS-----GSVLFQLNSDQLQPEGEALLSDLVKPLQVFLS 119

Query: 261 HSTEVISIRGHTDASPFR---NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
              +++ + G TD  P         DNW LS  RA +  + L++ G+  D++   + F  
Sbjct: 120 QHDDMLMVSGFTDDLPINRGNGRYADNWGLSAQRALTVTRTLIEQGMPADQVFAAA-FGD 178

Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342
           ++    +D     + NRR+++    RQ
Sbjct: 179 NQPVAPNDDADSRARNRRVELTTVPRQ 205


>gi|88810246|ref|ZP_01125503.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
 gi|88791876|gb|EAR22986.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
          Length = 230

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 91  YMDVQEAKLREKMQGTGVSVTRQGDAIILNM---PNNVTFDIDSSSLKPAGANTLTGVAM 147

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ GHTD++        N +LS  RA S    L+  GV+ +RI + +G  
Sbjct: 148 VLKEYDQTGVNVVGHTDST---GGHAHNMKLSKKRADSVASSLIIQGVAANRI-RTAGVG 203

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                 ++      + NRR++I + 
Sbjct: 204 PDDPIASNSTAEGRAQNRRVEITLT 228


>gi|288929697|ref|ZP_06423541.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329202|gb|EFC67789.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 295

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 9/233 (3%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           ++  + +  + Q   +     S  +Q    K               ++        +   
Sbjct: 51  ELNESYRSTREQLAASQARVTSLEEQLAQQKRDYAALQGSLDKSLNNSSANNVNISKLVD 110

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +   ++     ++ K +   L   +++ L+  ++   +K V     +  + IS+ D   
Sbjct: 111 QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVRVLKGVVYISLADNM- 169

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDR 291
             ++   S          L KI +++    +    + G+TD  P      R+NW LS  R
Sbjct: 170 --LYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLVEGNTDNVPITRENIRNNWDLSCLR 227

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A S  Q L  + GV+  R++   G         +        NRR  I++  +
Sbjct: 228 ASSVVQYLQTRYGVNPKRLTAG-GRGEFNPVATNGTEVGKQRNRRTQIIITPK 279


>gi|262198395|ref|YP_003269604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081742|gb|ACY17711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 193

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIA 281
           +    I+      F+   ++ L E+  +L ++  ++  + ++  I + GHTD+   +  A
Sbjct: 72  LRDDRIEIMQQVQFEFGKAVLLEESKSLLDEVAAIMRDNPQIAKIRVEGHTDS---KGKA 128

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             N RLS +RA S    L+  GV+ +R+    GF   +   ++D     + NRR++  + 
Sbjct: 129 NFNLRLSRERAASVRAYLISQGVAGNRLVA-RGFGMTKPIDSNDTDDGRARNRRVEFNIV 187

Query: 340 DR 341
            R
Sbjct: 188 SR 189


>gi|237722039|ref|ZP_04552520.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298483221|ref|ZP_07001400.1| flagellar motor protein MotB [Bacteroides sp. D22]
 gi|229448908|gb|EEO54699.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298270538|gb|EFI12120.1| flagellar motor protein MotB [Bacteroides sp. D22]
          Length = 280

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 49  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 226 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 261


>gi|323525290|ref|YP_004227443.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323382292|gb|ADX54383.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 168

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
             T +FD + S   P+   V+ +   +L  S + I + G+TD          N +LS  R
Sbjct: 52  PETALFDFNKSEVRPDASAVVDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L+  GV  +RI +  G A++    ++D     + NRR +I+V  
Sbjct: 109 AVAVGYALVARGVPMERI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158


>gi|167818291|ref|ZP_02449971.1| hypothetical protein Bpse9_24346 [Burkholderia pseudomallei 91]
 gi|167913436|ref|ZP_02500527.1| hypothetical protein Bpse112_23310 [Burkholderia pseudomallei 112]
          Length = 393

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 283 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 342

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 343 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 393


>gi|149190355|ref|ZP_01868628.1| outer membrane protein [Vibrio shilonii AK1]
 gi|148835844|gb|EDL52808.1| outer membrane protein [Vibrio shilonii AK1]
          Length = 219

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 9/204 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q+   +N+ T + E       +     +                I A         +   
Sbjct: 19  QATQRQNATTGEYETNSATKGAVIGAIAGTAVGIASGGDSRGILIGAASGAALGGGVGYY 78

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                  L  + +  GV  E      L  ++   N   FD +S          L+ +  +
Sbjct: 79  FDQQEKALRQELLNSGVQVERVGDNQL--LLRLENGIGFDSNSHALNSSIHNTLRGVARI 136

Query: 259 LAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L        +  G+TD++     A+ N  LS  RA      L+   V+  R     G   
Sbjct: 137 LVEYPNTSLVIEGYTDST---GSAQYNQELSEKRAEQVRSFLISQNVAAGRAVA-RGNGE 192

Query: 318 HRLKIASDPMNSA--NRRIDILVE 339
                ++        NRR++I + 
Sbjct: 193 RFPICSNSTPEGRQCNRRVEIKIL 216


>gi|169825896|ref|YP_001696054.1| chemotaxis protein motB [Lysinibacillus sphaericus C3-41]
 gi|168990384|gb|ACA37924.1| Chemotaxis protein motB (Motility protein B) [Lysinibacillus
           sphaericus C3-41]
          Length = 235

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            + +     N       ++    +K ++ L ++   + + ++    +        E T  
Sbjct: 47  EQPAPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEG---QFATEMTDE 103

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281
           G+L++I D     +FD   +   PE I + +++ +VL ++    I I GHTD  P     
Sbjct: 104 GLLVTIRDS---ILFDPGQATIKPEYIPIAKELADVLVSNPPRNIVITGHTDNVPAGPNF 160

Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             N  LSL RA + Y VL+ S   +  +  S   G+  +R    +D     + NRR+++L
Sbjct: 161 SSNLELSLMRASNFYMVLLDSNSQLKSENFSA-KGYGENRAIAPNDTAEGRAKNRRVEVL 219

Query: 338 VE 339
           ++
Sbjct: 220 IQ 221



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 5/140 (3%)

Query: 36  VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95
            YAD +T+L+A F++++  ++ D +  + +   F+             F EQ  P  S  
Sbjct: 2   PYADILTLLLAVFIILFASSSVDQEKLERMSAVFSQVFD-----GGTSFLEQPAPVPSPN 56

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
              D +  ++        ++             N +     ++ ++       RDS    
Sbjct: 57  ADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGLLVTIRDSILFD 116

Query: 156 DLCKSTDLEKSINKEENYFL 175
               +   E     +E   +
Sbjct: 117 PGQATIKPEYIPIAKELADV 136


>gi|167848193|ref|ZP_02473701.1| hypothetical protein BpseB_23171 [Burkholderia pseudomallei B7210]
          Length = 382

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 272 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 331

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 332 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 382


>gi|167589254|ref|ZP_02381642.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
          Length = 246

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 13/235 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKS 166
              + +G     +  +         +    +   +  +   +          K    +  
Sbjct: 17  PGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEIGDVATPPNWSANVQKLIGPQLK 76

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
              +    +     +    ++ + + Q LA  +++TL+      I  G+    +  G+L 
Sbjct: 77  QISKGQLKINGTQIDMKGEVRNEAQRQQLASDMANTLNPTYT--IKNGLRVSASEQGLLD 134

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
             +  R    F+  S+   P+  VVL ++   L+        + GHTD          N 
Sbjct: 135 QTLANRTIE-FETGSATLTPQGKVVLDQMAAALSKMPNRTVDLIGHTDN---SGNRASNI 190

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            LS  RA +    L+  G++  +++  +G    +    +D     + NRRID  V
Sbjct: 191 ALSQARADAVKGYLITKGIASQQMTT-TGVGPDQPIAPNDTAEGRARNRRIDFRV 244


>gi|159045480|ref|YP_001534274.1| hypothetical protein Dshi_2940 [Dinoroseobacter shibae DFL 12]
 gi|157913240|gb|ABV94673.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 648

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 93/276 (33%), Gaps = 16/276 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G   E      +   ++  +  + +       ++     +         +     +   
Sbjct: 374 SGELAEARAQADTLDQRLTEAERDRLLLGLAQEQLRRVEAQSAQDARRVAVLNEQVAALR 433

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +      E      ++    +++  E N  L  ++ E+      ++  +   +  +
Sbjct: 434 TQLNSLQGLLDEASARDAEAQVQIEALGTELNTALARVAAEQRARADLEEAERRRLEAEA 493

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEV 258
             L+   ++   +       + G+ I        ++ +FD       P+    + K+  +
Sbjct: 494 QDLARYRSEFFGELRDLLGGQEGVRIEGDRFVFSSSVLFDTGEVALSPQGQAEVAKVAGI 553

Query: 259 LAHS--------TEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307
           L             V+ + GHTD  P        DNW LS  RA S  + L++  G+  D
Sbjct: 554 LRSVADRIPEGIDWVLRVDGHTDNVPVTGGGKYADNWELSQGRALSVARFLIEDQGIPPD 613

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           R+   +GF  ++     D     + NRRI++   ++
Sbjct: 614 RL-APTGFGEYQPVSLEDTPEGRALNRRIELKFTEK 648


>gi|120613283|ref|YP_972961.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120591747|gb|ABM35187.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 217

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F  + S   P    VL +  E L ++    + I G+TD++        N  LS
Sbjct: 103 DIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVRIVGYTDST---GNDAINNPLS 159

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV--EDRQG 343
           LDRA S    L   GV+  R+ ++ G         +D     + NRR++I V    RQG
Sbjct: 160 LDRATSTRNYLTARGVNGARV-QVEGRGAREPVATNDTAEGRARNRRVEIYVGERPRQG 217


>gi|116623978|ref|YP_826134.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227140|gb|ABJ85849.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 388

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 7/143 (4%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
               +      L        +L          +     +   FD  S+   P +   L  
Sbjct: 244 AKTCVLPANVKLPEGGAAARLLTFIQSPESRNTTWFTMDQIAFDSGSATLKPASQTQLNN 303

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I  VL +   V   I G+TD       A  N RLS +RA S   VL+K GV  +R +   
Sbjct: 304 IATVLNNCPGVRLDIAGYTDNV---GSAESNLRLSRNRANSVVAVLVKEGVPRERFNA-E 359

Query: 314 GFAHHRLKIAS--DPMNSANRRI 334
           G+        +  +   + NRR+
Sbjct: 360 GYGEEDPVADNSIEQGRAQNRRV 382


>gi|261253628|ref|ZP_05946201.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
 gi|260937019|gb|EEX93008.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
          Length = 324

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  +  F  +S+    ++   L ++ E L    +  + I G+TD       A  N  +S 
Sbjct: 209 QLGSGSFKLNSTELNQDSADQLDELVEFLNTYPQANVEIIGYTDT---SGAAEYNQVVSE 265

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA S    L + G+   RI+   G   +    +++       NRR++++V
Sbjct: 266 KRAESVATTLEEKGIDSSRITA-RGEGENNPIASNETREGREQNRRVEVIV 315


>gi|256823714|ref|YP_003147677.1| type IV / VI secretion system protein, DotU family [Kangiella
           koreensis DSM 16069]
 gi|256797253|gb|ACV27909.1| type IV / VI secretion system protein, DotU family [Kangiella
           koreensis DSM 16069]
          Length = 439

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 68/177 (38%), Gaps = 7/177 (3%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             ++++       ++               +     +    L  +     +        +
Sbjct: 250 YQLSQKAEPVYNSIASLVPENKVDLASSDSVINYAKNLRQLLSTEIGRGLLQVVEDIDHV 309

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283
            I I   +   M+  +S+     +I +++KIG++   +   I + GH+D           
Sbjct: 310 AIIITSNQ---MYSSASAQLNENSIALIEKIGQIATTTPGHIQVVGHSDDQKIFTAKYHS 366

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           NW LSL RA S  ++L ++     R++   G      ++A+  D   + NRR++IL+
Sbjct: 367 NWELSLARANSVVRILNQNQNLAGRVTA-EGRGAAEPRVANDTDTNRALNRRVEILL 422


>gi|167741105|ref|ZP_02413879.1| hypothetical protein Bpse14_23766 [Burkholderia pseudomallei 14]
          Length = 394

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 284 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 343

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 344 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 394


>gi|315281340|ref|ZP_07869986.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
 gi|313615016|gb|EFR88514.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
          Length = 275

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q       I     +    +       D      + K+ + +    +         +  
Sbjct: 47  EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            +L  + +++++   K+I S ++    +N+   +  + +  G+LI+I D     +F   S
Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 160

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298
           +        + ++IGE+ A     +   + GHTD  P        NW LS+ RA +  + 
Sbjct: 161 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220

Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAVNREKNRRVEIMVR 264



 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            ++    ++  P+  + N +  +++E   K   + +  +        + +N     +  +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122

Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +    +         K   +   +    +         LS  K    K    L    K
Sbjct: 123 QIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGK 182

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226
                +     DN+       ++   + +
Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211


>gi|312129863|ref|YP_003997203.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906409|gb|ADQ16850.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 300

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 38/307 (12%)

Query: 42  TVL--MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           T+L  +AF       +        +++        +L    + + D +N      Q +  
Sbjct: 10  TLLVGLAF------TSCVSKKKFASLQSELASTKADLERRGELVNDFKNKLVACEQERDR 63

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
           ++       N +                           Q E  +       E+  DL  
Sbjct: 64  VATTNSAKDNQIS----------------------DLKSQIEDLRRVRDTQMERVGDLTV 101

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                     +    L    K   L    K +   L   ++  L   + D +    +   
Sbjct: 102 LNRSANENINKTLAQLEKKDKYISLLQAAKSKADSLNLALAVNLKSALKDGLDDTDVDVK 161

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
                 + +++  +  +F   S    P    VL+K+  ++    +  + + G+TD     
Sbjct: 162 VDK--TVVMVNLSDKMLFTSGSYKISPRAYSVLEKVAAIIKSRPDLEVMVEGYTDNVSIN 219

Query: 279 NI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                DNW LS+ R+ S  + L    GV  ++I    G   +    ++        NRR 
Sbjct: 220 TACIEDNWDLSVKRSTSVVRTLQSKFGVDPNKIIAA-GRGEYNTLTSNSTAEGRAINRRT 278

Query: 335 DILVEDR 341
            I++  +
Sbjct: 279 RIILMPK 285


>gi|217423098|ref|ZP_03454600.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|217394006|gb|EEC34026.1| OmpA family protein [Burkholderia pseudomallei 576]
          Length = 558

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|167740993|ref|ZP_02413767.1| OmpA family protein [Burkholderia pseudomallei 14]
          Length = 558

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|85858730|ref|YP_460932.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
 gi|85721821|gb|ABC76764.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
          Length = 435

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRA 292
             +F        P+    +QK+ + +  + +V ++  GHTD++        N +LS +RA
Sbjct: 330 HILFASDKYNIEPKYDSEIQKVADYMKANPDVTAVVAGHTDSTH---SNAYNKKLSQNRA 386

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +    L++  G+   RI  + G+   +    +        NRR+ ++
Sbjct: 387 NAVKTALVEKYGIDASRIEAV-GYGEDKPIATNKTKAGRQKNRRVVVM 433


>gi|91794084|ref|YP_563735.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91716086|gb|ABE56012.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 377

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  +       +   V          ++ +      +FD  S++  P     +
Sbjct: 222 DADKDGVNDNIDKCPDTPMTHKVDATGCSVYEFVTKMYDLGKVLFDNDSAVIKPGYYADM 281

Query: 253 QKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRIS 310
           + +G+ L       + I GH            N  LS  RA +    L  K G+S  RI 
Sbjct: 282 EILGDHLVKYPAHTVIIEGHASNV---GKPDYNMSLSERRAQAVATALMTKYGISASRIK 338

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            + G+   + K+A +   +   NRRI+ +V   +
Sbjct: 339 SV-GYGVTKPKMAGNTAEAHRVNRRIEAIVTGTE 371


>gi|323697842|ref|ZP_08109754.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323457774|gb|EGB13639.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 250

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 89/246 (36%), Gaps = 18/246 (7%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD------ 156
           D+   +           +  +        F    +         L+  ++   +      
Sbjct: 3   DQEALEQQGGGPKSDPPKPDEGIPPWMATFADMVTLLLCFFVLLLSFTNQDVTNFRKLMG 62

Query: 157 -LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            + ++  ++      ++      + ++  +++  +++ +L   +   +      ++    
Sbjct: 63  SIQEALGVQYEDRSAQSVPYADTTFKERQSVRENRQIVELGVILKKAIRS---KDLTHMA 119

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
              + ++G+++ +  Q    +FDK S     E    LQ + + +  +   + IRGHTD  
Sbjct: 120 KVSSDKSGVMLRLSSQL---LFDKGSVELTAEAKQALQMVIDSMKQTDFNLVIRGHTDGE 176

Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSAN 331
              ++    NW LS  RA S  + +++   +   R+  + G+   +  +         AN
Sbjct: 177 TPESVQYGSNWSLSAARAASCLRYIIEHSDIPATRMKAV-GYGGSKPLLPGTSEENRQAN 235

Query: 332 RRIDIL 337
           RR++  
Sbjct: 236 RRVEFF 241


>gi|241764375|ref|ZP_04762401.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
 gi|241366218|gb|EER60782.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
          Length = 215

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           D  +   F    +   P    VL +  E L    E    I GHTD +        N  LS
Sbjct: 102 DIPSDISFAVGRADIQPNFAPVLDRFAEGLRAHPETDVRIVGHTDNT---GSDAVNDPLS 158

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV-EDRQG 343
           ++RA S    LM  GV   RI  + G    +    +        NRR++I V E  +G
Sbjct: 159 VNRASSTRNYLMNRGVDGRRI-SVEGMGERQPIATNATAEGRSRNRRVEIFVGERSRG 215


>gi|238754016|ref|ZP_04615375.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
 gi|238707768|gb|EEQ00127.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
          Length = 219

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA +    L+  GV+ +RI  I G  
Sbjct: 137 VLKEYEKTAVNVTGYTDST---GARAHNMILSQQRAETVGSALITQGVAANRIRTI-GAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PDNPVATNSTTAGKAQNRRVEITL 216


>gi|126457554|ref|YP_001074280.1| hypothetical protein BURPS1106A_A0237 [Burkholderia pseudomallei
           1106a]
 gi|242313025|ref|ZP_04812042.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|254195472|ref|ZP_04901900.1| OmpA domain protein [Burkholderia pseudomallei S13]
 gi|126231322|gb|ABN94735.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|169652219|gb|EDS84912.1| OmpA domain protein [Burkholderia pseudomallei S13]
 gi|242136264|gb|EES22667.1| OmpA family protein [Burkholderia pseudomallei 1106b]
          Length = 421

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421


>gi|89054158|ref|YP_509609.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88863707|gb|ABD54584.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 219

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L      + +L E T   +++++       +FD  S+         L+ +   L
Sbjct: 82  DRQAQDLRGSLSNERILIENTGEALILTL---PEGILFDVDSAAIRAGLQGDLRALAFNL 138

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  GHTD +     A  N  LS  RA +   VL++ GV+  R+  + G    
Sbjct: 139 NQYPDTRVVVEGHTDNT---GSASYNQDLSTRRAQAVSGVLLEGGVAPFRVQSV-GRGES 194

Query: 319 RLKIASDP--MNSANRRIDILVE 339
                +        NRR+++++ 
Sbjct: 195 APIATNLTPEGRQQNRRVEVIIR 217


>gi|53721204|ref|YP_110189.1| hypothetical protein BPSS0168 [Burkholderia pseudomallei K96243]
 gi|76819105|ref|YP_336847.1| hypothetical protein BURPS1710b_A1690 [Burkholderia pseudomallei
           1710b]
 gi|126443128|ref|YP_001061334.1| hypothetical protein BURPS668_A0328 [Burkholderia pseudomallei 668]
 gi|134280864|ref|ZP_01767574.1| OmpA domain protein [Burkholderia pseudomallei 305]
 gi|217423202|ref|ZP_03454704.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|226198699|ref|ZP_03794263.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|254263222|ref|ZP_04954087.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
 gi|52211618|emb|CAH37613.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
 gi|76583578|gb|ABA53052.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
 gi|126222619|gb|ABN86124.1| OmpA domain protein [Burkholderia pseudomallei 668]
 gi|134247886|gb|EBA47970.1| OmpA domain protein [Burkholderia pseudomallei 305]
 gi|217394110|gb|EEC34130.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|225929139|gb|EEH25162.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|254214224|gb|EET03609.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
          Length = 421

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421


>gi|296124309|ref|YP_003632087.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
 gi|296016649|gb|ADG69888.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
          Length = 275

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 22/231 (9%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           ++          +  N  Q    K  L + +   ++  +  +         N  L    K
Sbjct: 43  QQYQGLAMERNQFQGNLSQLMAEKVQLEQQNATLRNGLELANQRVDNMLAANSSLEDKVK 102

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             + +  +     D  +++                     +  +           +F   
Sbjct: 103 NMLTSSSKNPLSTDANQRMEELRRKYPDFEFDPQTGVSKFQENL-----------LFASG 151

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIA-----RDNWRLSLDRA 292
           S    PE   +LQ+   ++  +      + + GHTD  P    A       NW LS DRA
Sbjct: 152 SDEIRPEAYALLQEFARIMNSADSKHLKVLVVGHTDDKPISRKAVADKHPTNWHLSTDRA 211

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            S    L KSG++E R+    G++  +    +  D     NRR++I V   
Sbjct: 212 NSVVLALKKSGLAEQRMGAA-GYSLFQPLAPNSDDKNRQKNRRVEIFVLAP 261


>gi|53721134|ref|YP_110119.1| OmpA family protein [Burkholderia pseudomallei K96243]
 gi|52211548|emb|CAH37542.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
          Length = 558

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|148546044|ref|YP_001266146.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148510102|gb|ABQ76962.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 247

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 95  DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 151

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   RI  + G    
Sbjct: 152 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 207

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++      + NRR+++ ++
Sbjct: 208 QPIASNADANGRAQNRRVEVNLK 230


>gi|163753666|ref|ZP_02160789.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
 gi|161325880|gb|EDP97206.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
          Length = 626

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 81/277 (29%), Gaps = 11/277 (3%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               + +               +S +       +  TK           +          
Sbjct: 354 DVFASKVKGDSYGAVRNLGTPLNSNSDDFSFTFDEETKKGFVASNRDGGKGSDDIYEVTL 413

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I  + +        +  T  +  G ++  + D   S+   +          K+   K  +
Sbjct: 414 INPICDVDYVVVVTDKETGAALSGANVVLADDQGNSV-GSKTTDAEGKVTFKVECDKSSR 472

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
               +   +   +     D+  K V         +I  +   N   FD        +   
Sbjct: 473 LEATIQGYVPQQVDVNSGDDPTKLVEIPLAPIEEIIEDVIVLNPIYFDFDKHNIRQDAAF 532

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L K+  V+     + I +  HTD    R  A  N RLS  RA S  Q ++  G+   R+
Sbjct: 533 ELDKVVNVMTKYPNMVIKVETHTD---IRGSASYNQRLSERRAKSTVQYIISKGIDASRL 589

Query: 310 SKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341
           S   G       I      ++  +  NRR D ++  +
Sbjct: 590 SS-EGKGESSPLIDCGNKCTEEEHQQNRRSDFIIVSK 625


>gi|86132280|ref|ZP_01050875.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85817199|gb|EAQ38382.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 287

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271
           + +     +  + IS+ D+    +F   S         +L K+  V+    +    + GH
Sbjct: 138 QDIEINVEKGVVFISLSDK---VLFKSGSYQITSRAEEILGKVATVINSKPDFEALVEGH 194

Query: 272 TDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           TD  P+ R +  DNW LS  RA +  + L++ G +  ++    G +     + +D   + 
Sbjct: 195 TDNVPYNRGVLIDNWDLSAKRATAIVRKLVELGANPAQLIAA-GRSEFVPLVPNDTPENK 253

Query: 331 --NRRIDILVEDR 341
             NRR  I V  +
Sbjct: 254 STNRRTKIYVLPK 266


>gi|160884848|ref|ZP_02065851.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
 gi|156109883|gb|EDO11628.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
          Length = 280

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 49  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 226 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 261


>gi|126456220|ref|YP_001074174.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|126229988|gb|ABN93401.1| OmpA family protein [Burkholderia pseudomallei 1106a]
          Length = 542

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 426

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530


>gi|331648547|ref|ZP_08349635.1| putative OmpA-family membrane protein [Escherichia coli M605]
 gi|330908848|gb|EGH37362.1| putative outer membrane lipoprotein [Escherichia coli AA86]
 gi|331042294|gb|EGI14436.1| putative OmpA-family membrane protein [Escherichia coli M605]
          Length = 550

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
           +  +   +  +FD   +     +  VL      +      +  + G+TDA+      + N
Sbjct: 427 VQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEKSN 483

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            +LSL RA +    ++++         + G    +    +D     + NRR++I +  R
Sbjct: 484 QQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542


>gi|226198818|ref|ZP_03794382.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|225929258|gb|EEH25281.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|254428955|ref|ZP_05042662.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
 gi|196195124|gb|EDX90083.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
          Length = 384

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 82/273 (30%), Gaps = 12/273 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +  G +      GI   +   E +S +  D        +      +          R   
Sbjct: 104 HFAGNSAFEPYVGIGAGEFRTEPNSDSSNDFKETIGTLETGFQTMLHPHFLLDVGARPYY 163

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +        +     N +   S + ++     ++    + +                +  
Sbjct: 164 SFRTERWDAEVYAGLNFIIGGSSEKEEPAPVENVVSDSDGDGVPDERDQCANTPAGAQVD 223

Query: 190 K---RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                L D    I +++           V  +  +  +   + +      F    +    
Sbjct: 224 ATGCELDDDNDSIVNSMDECPNTPAGALVDDKGCQKYLDKDVKETL-YVEFGHDKAEVRQ 282

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
            +   L+ + E +        +  GHTD++     A  N +LS  RA +   VL+    V
Sbjct: 283 TSYPSLENLAEGMRQYPSANLVLEGHTDST---GSAAYNKKLSQQRADAVKTVLVDHYNV 339

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           S DRI+ + G+   +    +      + NRR++
Sbjct: 340 SADRITTV-GYGEEKPIADNKTSEGRAENRRVE 371


>gi|254182964|ref|ZP_04889557.1| OmpA family protein [Burkholderia pseudomallei 1655]
 gi|184213498|gb|EDU10541.1| OmpA family protein [Burkholderia pseudomallei 1655]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|254195556|ref|ZP_04901984.1| OmpA family protein [Burkholderia pseudomallei S13]
 gi|169652303|gb|EDS84996.1| OmpA family protein [Burkholderia pseudomallei S13]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|167740414|ref|ZP_02413188.1| ompA family protein [Burkholderia pseudomallei 14]
          Length = 245

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154
           +     +    +   G      +          L   + +    N + +           
Sbjct: 2   AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 61

Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
              ++ K    +     +    +     +    +  + + Q LA  +++ L+      I 
Sbjct: 62  WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 119

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
            G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GH
Sbjct: 120 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGH 178

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD          N  LS  RA +    L+  G++  +++  +G    +    +D     +
Sbjct: 179 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 234

Query: 330 ANRRIDI 336
            NRRI+ 
Sbjct: 235 RNRRIEF 241


>gi|313497139|gb|ADR58505.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
          Length = 239

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   RI  + G    
Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++      + NRR+++ ++
Sbjct: 200 QPIASNADANGRAQNRRVEVNLK 222


>gi|13472158|ref|NP_103725.1| hypothetical protein mlr2359 [Mesorhizobium loti MAFF303099]
 gi|14022903|dbj|BAB49511.1| mlr2359 [Mesorhizobium loti MAFF303099]
          Length = 504

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 8/192 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +++G     +                  +  + +  K    +     +I    + L    
Sbjct: 302 TDEGDATAGALLALNPSAPVTIERASVAAPAEPVQAKPPSPIHPDTTQIDRIRAALAQQI 361

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
              G+   T    I++ I    N  +F    +    +   +   I + L      I I G
Sbjct: 362 AAGGLGVGTKGDFIVVEI---SNQLLFASGQAELKAQFQPIAADIAKALDAEAGPIKIVG 418

Query: 271 HTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           HTD    +  +  + N+ LS+ RA +   ++ +      R+  + G         +    
Sbjct: 419 HTDNVKPKKSSAFKSNFDLSVARAKAVQAMIARQLKDPSRL-SVDGKGEDEPIADNATAD 477

Query: 328 -NSANRRIDILV 338
             + NRR+D+++
Sbjct: 478 GRAKNRRVDVMI 489


>gi|325913887|ref|ZP_08176246.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325539962|gb|EGD11599.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 221

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      K +   L+  +A            R  ++   I  R   +
Sbjct: 43  QLSSRLDQEVKQRQAEAQRRKTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   VL+ +   LA       E++ + G TD  P         DNW LS 
Sbjct: 93  FAFNSDELQPEGREVLKSLAAPLAQYLSAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRALIADGVPAASVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200


>gi|34763974|ref|ZP_00144866.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886249|gb|EAA23533.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 172

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD    +   +    L  + + L  + +  I I G+
Sbjct: 48  EGVTIRREGNNLILSM---PELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGY 104

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   F      N  LS+ RA +    L+  G     I  I G+        +      S
Sbjct: 105 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 160

Query: 330 ANRRIDILVED 340
            NRR++ ++  
Sbjct: 161 RNRRVEFIISR 171


>gi|296128006|ref|YP_003635256.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
 gi|296019821|gb|ADG73057.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
          Length = 560

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 74/282 (26%), Gaps = 15/282 (5%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           I   + P    LM  ++ +                +   E  ++   +            
Sbjct: 104 IASSWPPVNVRLMDLARDVVLHVGADSDGEP----VVAPEDWSRFRTERGTRLQMPFAAP 159

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
               + +               +  +             E +            S    +
Sbjct: 160 ADDVDALSLFFPGAPLFAQVPIIDGELPSAVHPDDVAAAEAAAATAAARASASPSATPDV 219

Query: 185 AMKRKKRLQDLAKKISSTLSGLV--ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                    DL   + + +  L      +   V    +   + +++       +F   S+
Sbjct: 220 EETAPPEELDLDAVVEAPVFPLESTTAELDGAVQTIESTEKVEVTLGSD---VLFAFDSA 276

Query: 243 IPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              PE+   +  + + LA      + + GHTD          N  LS  RA +    L  
Sbjct: 277 DLTPESADAVALVAQRLAEREAGSVEVVGHTDDQ---ADDTYNLDLSRRRAQAVADALEA 333

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
                    +++G       + +D     + NRR+ + +  +
Sbjct: 334 QVAGSGHRMRVAGRGESEPVVPNDSEENRALNRRVTVSLTSK 375


>gi|237716994|ref|ZP_04547475.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405762|ref|ZP_06082312.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|229442977|gb|EEO48768.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356637|gb|EEZ05727.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 280

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 49  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 261


>gi|167920717|ref|ZP_02507808.1| ompA family protein [Burkholderia pseudomallei BCC215]
          Length = 247

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154
           +     +    +   G      +          L   + +    N + +           
Sbjct: 4   AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 63

Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
              ++ K    +     +    +     +    +  + + Q LA  +++ L+      I 
Sbjct: 64  WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 121

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
            G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GH
Sbjct: 122 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGH 180

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD          N  LS  RA +    L+  G++  +++  +G    +    +D     +
Sbjct: 181 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 236

Query: 330 ANRRIDI 336
            NRRI+ 
Sbjct: 237 RNRRIEF 243


>gi|254299760|ref|ZP_04967209.1| OmpA family protein [Burkholderia pseudomallei 406e]
 gi|157809397|gb|EDO86567.1| OmpA family protein [Burkholderia pseudomallei 406e]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|24216314|ref|NP_713795.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24197586|gb|AAN50813.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 475

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                 A      V    T  GI IS+    N+ +FD +SS    E  + L++I  VL  
Sbjct: 340 EEEDNQAAPESSPVEIRRTEEGIAISL----NSVLFDHNSSELKQEAKLELKRIASVLKK 395

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
             +  I I GHTD          N +LS +RA S  + L  + G+ E R+    G+   +
Sbjct: 396 YADREIRISGHTDN---SGGEEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSK 451

Query: 320 LKIASDP--MNSANRRIDILV 338
               +        NRR+DI +
Sbjct: 452 PIADNSTIQGRQKNRRVDITI 472


>gi|126664582|ref|ZP_01735566.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
 gi|126630908|gb|EBA01522.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
          Length = 373

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 93/301 (30%), Gaps = 15/301 (4%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLM------TASKGIFDEQNPPERSSQNKIDLSIDEH 105
           +   ATD D  +    Y+               A    FD   P      +         
Sbjct: 78  YSSGATDFDEVRVDGTYYFAGPDRTWNPYVSVGAGHASFDGTGPSTPGINSDETRVNLGT 137

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
             + +++ ++      +++  ++ + F    S             +       +      
Sbjct: 138 GVRYNINDRVSLRGDLREFHGIDESTFDTMASLGISVAFTRTVGQAAPVAPAPQPPADAD 197

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +    +     P +        +   L      +  +            V  +    G++
Sbjct: 198 NDGVPDTRDQCPNTPRGAKVDAKGCELDSDKDGVVDSKDKCPNTAAGMKVD-KDGCEGVV 256

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDN 284
            +I        F  +S+         ++++ + L  + T  + I GHTD++     A  N
Sbjct: 257 KTIDTFEIDVQFPLNSAEIGAAYDSQIRRVADALRANSTTYVEIAGHTDST---GAAAYN 313

Query: 285 WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             LS  RA +    L     V+ DR+S   G+       ++      +ANRR++  ++ R
Sbjct: 314 QDLSERRAAAVANRLTSTLDVNPDRVSS-KGYGEAEPIASNSTDAGRAANRRVEARIQVR 372

Query: 342 Q 342
           +
Sbjct: 373 R 373


>gi|260061787|ref|YP_003194867.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
           [Robiginitalea biformata HTCC2501]
 gi|88785919|gb|EAR17088.1| Outer membrane protein-like peptidoglycan-associated (lipo)protein
           [Robiginitalea biformata HTCC2501]
          Length = 453

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD  S+   P ++ V+++I +VL     +   I GHTD+      A  N  LS  R
Sbjct: 347 NAILFDSGSANLQPRSMGVIRQISQVLQQDGGMSLQIVGHTDSD---GDADANVALSQAR 403

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           A +  + L+   GV   R+S + G         ++     + NRR++ +
Sbjct: 404 AEAVKKALVDVYGVDAGRLSTL-GKGESEPVSDNNSPAGKAQNRRVEFI 451


>gi|126649533|ref|ZP_01721774.1| flagellar motor protein MotB [Bacillus sp. B14905]
 gi|126593858|gb|EAZ87781.1| flagellar motor protein MotB [Bacillus sp. B14905]
          Length = 254

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            + S     N       ++    +K ++ L ++   + + ++    +        E T  
Sbjct: 66  EQPSPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEG---QFATEMTDE 122

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281
           G+L++I D     +FD   +   PE I + +++  VL ++    I I GHTD  P     
Sbjct: 123 GLLVTIRDS---ILFDPGQATIKPEYIPIAKELAGVLVSNPPRNIVITGHTDNVPAGPNF 179

Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             N  LSL RA + Y VL+ S   +  +  S   G+  +R    +D     + NRR+++L
Sbjct: 180 SSNLELSLMRASNFYMVLLDSNSQLKSENFSA-KGYGENRAIAPNDTAEGRAKNRRVEVL 238

Query: 338 VE 339
           ++
Sbjct: 239 IQ 240



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 5/147 (3%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   SW + YAD +T+L+A F++++  ++ D +  + +   F+             F
Sbjct: 10  HDEHIDESWLVPYADILTLLLAVFIILFASSSVDQEKLERMSAVFSQVFD-----GGTSF 64

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
            EQ  P  S     D +  ++        ++             N +     ++ ++   
Sbjct: 65  LEQPSPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGL 124

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEE 171
               RDS        +   E     +E
Sbjct: 125 LVTIRDSILFDPGQATIKPEYIPIAKE 151


>gi|171320878|ref|ZP_02909877.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171093863|gb|EDT38995.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 214

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +   S+ G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVVGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALGQRGVAGGRLSA-QGMGASNPIADNATDAGRAQNRRVEIYLRAPQ 212


>gi|91202869|emb|CAJ72508.1| similar to flagellar motor protein MotB [Candidatus Kuenenia
           stuttgartiensis]
          Length = 223

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 11/194 (5%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA--DNI 211
           G   C   D  + +N+ +   +   S E      +   + +  K     +  L    ++I
Sbjct: 18  GMTGCAELDELRVLNRRQAITIRDQSDEIARYRNQLTSMSEKIKASEEEMEKLRKLAESI 77

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRG 270
             GV    T  G +I         +FD   +         L+K+   L  +    + I G
Sbjct: 78  GGGVSVRDTFEGPVILF---PEMILFDSGMATIKAHGEDALRKMARFLEENPASSLRIDG 134

Query: 271 HTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           HTD+ P          N  LS  RA S +  L K G   ++   I+GF  +R    +   
Sbjct: 135 HTDSDPIIKTKHLWDSNHHLSAARALSVFHFLTKKGNIPEQRIHIAGFGPNRPIAPNTTP 194

Query: 328 NSA--NRRIDILVE 339
                NRR++ L+ 
Sbjct: 195 AGKKENRRVEFLIL 208


>gi|42526179|ref|NP_971277.1| OmpA family protein [Treponema denticola ATCC 35405]
 gi|41816291|gb|AAS11158.1| OmpA family protein [Treponema denticola ATCC 35405]
          Length = 422

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A  +   ++ + K     +   V D  ++    E T  G+ ISI        F  +S+I 
Sbjct: 270 ARAKVIEVKKIDKAAEEEIKKSVEDLNLENTTIEKTDEGLTISI----ENIQFLPNSAIL 325

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
                  L+KIGE+L    +    I GHT          +   LS +RA +    L++ G
Sbjct: 326 RESEKEKLKKIGEILLKFPDREFLISGHT---ALAGTEEERQALSEERAAAVANYLIELG 382

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           V +       GF   R   A++     + NRR++I + D+
Sbjct: 383 VQKREHVYTRGFGARRPVAANNSPENMAKNRRVEITILDK 422


>gi|332878199|ref|ZP_08445928.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332683937|gb|EGJ56805.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 229

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  D+ +   F+ +      ++   L K+  VL    
Sbjct: 80  QAKKIEEEIPGAEVKRVDDGIVVTF-DENSGVYFETAKHNINEKSKETLNKLIAVLKEYP 138

Query: 264 EVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           E   +  G+TD+         N  LS  RA S       +G++  R +    F       
Sbjct: 139 ETNVVVAGYTDSV---GKDEYNMGLSKRRAQSVTNYFTSNGLAASRFTT-KWFGEQNPVA 194

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      + NRR+++++   +
Sbjct: 195 DNGTPEGRAKNRRVNVVIVPNE 216


>gi|304393653|ref|ZP_07375581.1| OmpA/MotB [Ahrensia sp. R2A130]
 gi|303294660|gb|EFL89032.1| OmpA/MotB [Ahrensia sp. R2A130]
          Length = 1102

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 9/201 (4%)

Query: 141  EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
            E    S T  SE GK +  +      +    +Y +P  +       K  +    +     
Sbjct: 903  EGKAGSETEVSEIGKRVSDALPDGYRLANRLSYPIPAPAIAPKAEPKPVEAPVSMKP--E 960

Query: 201  STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            + ++    D         +    +    I +    +FD + +     +  +L  + +  +
Sbjct: 961  NPIAAPKEDTPEPASEEVSAACPVDFQQILRGKKILFDNNRAFIKASSYPLLDSLVDGFS 1020

Query: 261  HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              ++  + I GHTDA         N  LS  RA +    +   G+  D      GF   +
Sbjct: 1021 KCSDARVMISGHTDAV---GRDAYNLSLSQSRAQAVLDYIAGKGIDVDAFEAA-GFGETK 1076

Query: 320  LKIAS--DPMNSANRRIDILV 338
                +  D   +ANRRI I V
Sbjct: 1077 PIADNATDTGRAANRRIVIEV 1097


>gi|237509510|ref|ZP_04522225.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
 gi|235001715|gb|EEP51139.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D               +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|115375674|ref|ZP_01462929.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310821151|ref|YP_003953509.1| OmpA-like Outer membrane domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367322|gb|EAU66302.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309394223|gb|ADO71682.1| OmpA-like Outer membrane domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 380

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + S     +  VL +  + L  + +    I GH+D+        +N  LS  RA + 
Sbjct: 269 FAWNQSTLEEASFPVLDEAVQALKDNPDFRVQIEGHSDS---SGADDNNQTLSEKRAKTV 325

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  G++++R+    GF+       ++ +     NRR++ +V
Sbjct: 326 LDYLVAHGIAKERLVS-KGFSSSVPLDTNNTVAGRENNRRVEFVV 369


>gi|213028311|ref|ZP_03342758.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 111

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
           R    FD SS+   P     L  +  VL    +  +++ G+TD++        N RLS  
Sbjct: 2   RTNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQ 58

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           RA S    L+  GV   RI + SG        ++      + NRR++I +
Sbjct: 59  RADSVASSLITQGVDASRI-RTSGMGPANPIASNSTAEGKAQNRRVEITL 107


>gi|330009105|ref|ZP_08306392.1| OmpA family protein [Klebsiella sp. MS 92-3]
 gi|328534943|gb|EGF61477.1| OmpA family protein [Klebsiella sp. MS 92-3]
          Length = 567

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L + +   +         + V        + +      +  +FD   +     +  VL
Sbjct: 396 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 450

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +       I + G+TD +      + N +LSL RA +    ++++         
Sbjct: 451 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFA 507

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G         +D     +ANRR++I +  R
Sbjct: 508 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 539


>gi|213156444|ref|YP_002318864.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
 gi|213055604|gb|ACJ40506.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
          Length = 255

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L     E + I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGREKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255


>gi|126444048|ref|YP_001061161.1| OmpA family protein [Burkholderia pseudomallei 668]
 gi|126223539|gb|ABN87044.1| OmpA family protein [Burkholderia pseudomallei 668]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D               +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|99081935|ref|YP_614089.1| hypothetical protein TM1040_2095 [Ruegeria sp. TM1040]
 gi|99038215|gb|ABF64827.1| flagellar motor protein-like protein [Ruegeria sp. TM1040]
          Length = 784

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            Q   E+ +  +    +         + K  S + +++   L   +  L           
Sbjct: 513 AQEISEQRTLAEQRADLLAQARAALAEEKQISEDARRETALLNQQVAALREQLGGLQSLL 572

Query: 146 SL--TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
                RD+ +G  L        +               +    KR +  ++     +  L
Sbjct: 573 DDFKERDAAQGIQLQSLGQDLNTALARAAAEERRRRMLEEQERKRLEAERERLANEAKDL 632

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA- 260
               ++   +       + G+ I        +  +F   S+         + K+  +L  
Sbjct: 633 EQYRSEFFGQLRSVLGNQEGVRIEGDRFVFASEVLFALGSAELSEAGKAEIAKVARILQN 692

Query: 261 -------HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
                      +I + GHTD   F       DNW LS  RA S  + ++   G+   R+ 
Sbjct: 693 VAAAIPDDINWIIRVDGHTDNQRFVGAGKYADNWELSQGRALSVVRYMIDELGIPPGRL- 751

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             +GF   +    +D     + NRRI++ + +R
Sbjct: 752 AANGFGEFQPVNPADTPEARAQNRRIELKLTER 784


>gi|258405280|ref|YP_003198022.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
           5692]
 gi|257797507|gb|ACV68444.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 322

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 13/156 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L       S+ L     +   + V    T T + ++  D      F    +    +  
Sbjct: 160 DDLNTENYHFSNDLYYADKEVETRTVYVTNTDTPLPMADKDDVGMIFFQFDKASIQDQYT 219

Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L +   +L  + ++ + I GHTD        + N  LSL RA + +   ++  +S +R
Sbjct: 220 DELDEYVALLRRNPQMELLIEGHTD---IIGSEKYNLDLSLQRAMAVHDYFVRHNISSER 276

Query: 309 ISKISGFAHHRLKIASDP--------MNSANRRIDI 336
           + +  G+  ++    +            + NRR+++
Sbjct: 277 L-RTKGYGFNKPIAPNFTQNRKDNPEGRANNRRVEL 311


>gi|149178577|ref|ZP_01857164.1| OmpA/MotB [Planctomyces maris DSM 8797]
 gi|148842595|gb|EDL56971.1| OmpA/MotB [Planctomyces maris DSM 8797]
          Length = 278

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 76/216 (35%), Gaps = 12/216 (5%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           + Q +  + S      +   L       +S     N  L  L+ E+    +R   L   A
Sbjct: 49  AMQRDQFQQSANALQHERDQLAMRAQSLESNLNIANKRLDNLNAERSEMQQRYVSLMKKA 108

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           K   S L G       +            I+ +    +  +F   S    P    +L + 
Sbjct: 109 KGQPSPLDGEATRRFQELADKYPDFEFDPITGVSKFHSDILFSSGSDNLKPAAQEILNQF 168

Query: 256 GEVLAHSTE---VISIRGHTDASPFRNIA-----RDNWRLSLDRAYSAYQVLMKSGVSED 307
             ++         + + GHTD  P    +     R NW LS +RA S    L K GV ++
Sbjct: 169 AAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNWHLSTNRANSVVLTLSKFGVKQE 228

Query: 308 RISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           R+    G++  +  +   +D     NRR++I V   
Sbjct: 229 RMGAA-GYSMFQPVVPNQNDSARQKNRRVEIFVLAP 263


>gi|126641351|ref|YP_001084335.1| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
           17978]
          Length = 209

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 108 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDANKNLKLSQDRALAV 164

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 165 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 209


>gi|76819194|ref|YP_336761.1| OmpA family protein [Burkholderia pseudomallei 1710b]
 gi|76583667|gb|ABA53141.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
          Length = 558

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D               +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|332519179|ref|ZP_08395646.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045027|gb|EGI81220.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 284

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 9/223 (4%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +  Q   +N     NS   +        DS        +     +  + +         +
Sbjct: 52  QAIQERVDNYNSKINSLTQDIDGLQKDNDSRFTVSTSGTMTSNLTERQMQETLAKVDPNK 111

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A   K  +    +   + +    + N  + +      T ++ISI D+    +F+  S
Sbjct: 112 LSQAKTLKDSMNLAIQYNLNRVIDTSSLNEDEDITVSIDETVVMISISDKM---LFNTGS 168

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299
                +   +LQK+ +V+     +   + GHTD+        +DNW LS+ RA S  + L
Sbjct: 169 YRVSNKANDILQKLADVINSEPSIDVMVEGHTDSRTISTPTLKDNWDLSVLRATSVVRKL 228

Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             +  VS +++   SG + ++   A+D     S NRR  I++ 
Sbjct: 229 QNEYSVSPEKLIA-SGRSSYQPLTANDTKDGRSKNRRTRIILL 270


>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
 gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
          Length = 326

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 9/128 (7%)

Query: 215 VLFETTRTGILI-SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272
           V        + I ++ + R T  F   SS         L    + L       I + GHT
Sbjct: 188 VEEPIYVNQVTIATLEELRLTVPFAFDSSTITKGDAAKLAPFEQRLKEQDAAKIYVVGHT 247

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329
           D+         N  LS+ RA +    L +   +   RI    G        ++      +
Sbjct: 248 DSR---GAESYNQTLSVKRAEAVADALRQHLKMDSTRIIA-QGRGESEPVASNQTEEGRA 303

Query: 330 ANRRIDIL 337
            NRR+DI+
Sbjct: 304 QNRRVDII 311


>gi|260774919|ref|ZP_05883820.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609174|gb|EEX35332.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 188

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F  +S+   PE+  +L ++   +    +  + + G+TD+      A  N +LS  R
Sbjct: 76  DSSSFALNSAELKPESKAMLAELVAFMTEFPQSTVEVVGYTDS---SGAASYNQKLSERR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S    L + G+   RIS   G   +    +++       NRR++I+V
Sbjct: 133 AQSVADALEEQGIDASRISA-RGEGENNPIASNETQQGREQNRRVEIMV 180


>gi|240172204|ref|ZP_04750863.1| outer membrane protein a OmpA [Mycobacterium kansasii ATCC 12478]
          Length = 332

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 88/350 (25%), Gaps = 31/350 (8%)

Query: 1   MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
           M      +         ++            +W I  A          ++  ++ A    
Sbjct: 1   MAGTQPVSDTAPAPAHARRFRRH----PLGVAWLIALA----------VIPLLMAAIGYG 46

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
                         +L T +             S   I  S +                 
Sbjct: 47  AF-GRPTSVTAPTGDLPTLTTISSTPNASDVSWSLLSISRSGNTITLIGDFPDDNAKAAL 105

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
               + +      + +  + +    +L   + +      +   + S+  E N      + 
Sbjct: 106 LAALRNVLTPGVTVIDQIRIDPLVRALDFANAEPVFTAGAAIPDFSLKVERNTVTLSGTA 165

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-------- 232
                    +R    +      ++ +                                  
Sbjct: 166 ASPDQKDAVERAAKTSWPGVKIVNNIEVKGPAPTPGASPPPGSGAAGPCADLPAVINALT 225

Query: 233 -NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F        P    +L ++   L    +  +++ G++D          N+ LS+ 
Sbjct: 226 GGAIAFKNDGVSLTPADNQILSQVAAKLKACPDARVTVNGYSDN---GGGEGINFPLSVQ 282

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +    L   GV+ D I+   G+       ++D     + NRR++I+V
Sbjct: 283 RATTVADFLAAQGVARDHITA-RGYGSANPIASNDTPEGRAKNRRVEIVV 331


>gi|183984604|ref|YP_001852895.1| outer membrane protein a OmpA [Mycobacterium marinum M]
 gi|183177930|gb|ACC43040.1| outer membrane protein a OmpA [Mycobacterium marinum M]
          Length = 332

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        P++  VL ++ + L    +  +++ G+TD          N  LS  RA + 
Sbjct: 231 FGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDN---SGSEGLNIPLSAQRAQTV 287

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV  D I+   G        ++D       NRR++I+V
Sbjct: 288 ADFLVAHGVPTDHITA-KGLGSANPIASNDTAEGRIKNRRVEIVV 331


>gi|328473002|gb|EGF43850.1| putative lipoprotein [Vibrio parahaemolyticus 10329]
          Length = 219

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L    +  GV  +      L  ++   N   F  SS          L+ +  +L
Sbjct: 80  DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 137

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  G+TD++        N  LS  RA S  Q L+   V+  R     G+   
Sbjct: 138 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 193

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I + 
Sbjct: 194 NPICSNQTSEGRACNRRVEIQIL 216


>gi|167896107|ref|ZP_02483509.1| ompA family protein [Burkholderia pseudomallei 7894]
          Length = 243

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------- 154
                +    +   G      +          L   + +    N + +            
Sbjct: 1   GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNW 60

Query: 155 -KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     +    +  + + Q LA  +++ L+      I  
Sbjct: 61  SANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHT
Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHT 177

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D          N  LS  RA +    L+  G++  +++  +G    +    +D     + 
Sbjct: 178 DN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRAR 233

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 234 NRRIEF 239


>gi|262278657|ref|ZP_06056442.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
 gi|262259008|gb|EEY77741.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
          Length = 255

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKSIPADHLSA-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255


>gi|167031827|ref|YP_001667058.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166858315|gb|ABY96722.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 240

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 87  DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   RI  + G    
Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++      + NRR+++ ++
Sbjct: 200 QPIASNADANGRAQNRRVEVNLK 222


>gi|54307864|ref|YP_128884.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
 gi|46912290|emb|CAG19082.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
          Length = 439

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 10/147 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I   L   V   +   + FE     I I +       +F   S+        +L KI   
Sbjct: 295 IQQLLQSEVERGL---LEFEEHADRIRIVLNSND---LFASGSNEVKASIAPILSKIAHT 348

Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +   I I GHTD  P   +    NW LSL RA +   VL        R+    G   
Sbjct: 349 LESTNGRIMIVGHTDDKPIFTSKYPSNWHLSLARATAVANVLAMGTELRGRLWP-EGQGD 407

Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342
              +  +      ++NRR++I +  +Q
Sbjct: 408 ANPRNPNTSKANRASNRRVEIDLLYQQ 434


>gi|86136455|ref|ZP_01055034.1| flagellar motor protein [Roseobacter sp. MED193]
 gi|85827329|gb|EAQ47525.1| flagellar motor protein [Roseobacter sp. MED193]
          Length = 791

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 16/302 (5%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            A+D    +          ++    ++                     D+         +
Sbjct: 491 AASDQAVLQQRLLAALNAQQDAEAGAEKDRSLAQERAALLAQAQAALSDQKTVSAEAQRE 550

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
               NQ+    R +                    +    G+DL  +     S  +     
Sbjct: 551 TALLNQQVAALREQLGGLQAILDDYQARDDAQQVQLQNLGQDLNSALARAASEERRRRLL 610

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-- 232
                K             +  +  +  L    ++   +      ++ G+ I        
Sbjct: 611 EESERKRLEAEAAELASKAESLETKAQDLERYRSEFFGRLRNLLGSQEGVRIEGDRFVFA 670

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARD- 283
           +  +F   S+         + K+ ++L             +I + GHTD +      +  
Sbjct: 671 SEVLFASGSADLSRAGEGEVAKVAQILQSVAAEIPPELNWIIRVDGHTDNTAMAGSEKYS 730

Query: 284 -NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            NW LS  RA S  + ++++ G++ DR+   +GF   +     D     + NRRI++   
Sbjct: 731 DNWELSQGRALSVVRFMIENLGIAPDRL-AANGFGEFQPVNTDDTPEARAQNRRIELKFT 789

Query: 340 DR 341
           +R
Sbjct: 790 ER 791


>gi|78067236|ref|YP_370005.1| OmpA/MotB family protein [Burkholderia sp. 383]
 gi|77967981|gb|ABB09361.1| OmpA/MotB family protein [Burkholderia sp. 383]
          Length = 214

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  SI G+TD++     A+ N  LS +
Sbjct: 103 PSSVTFATNQYAITPAFQPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 160 RAQSVVNALAQRGVNGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 212


>gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 658

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
           S  +  N   F+        ++   L ++   +  +  V + I GHTD    +  A  N 
Sbjct: 547 SANETLNNLFFESGRYDLAEKSRTELDRLSVFMQANPTVAVEISGHTDD---KGDAAANL 603

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            LS  RA +    L K+G+   RI  + G+   R  + +    +   NRRID
Sbjct: 604 ALSQKRAQAVVTYLTKAGIQPSRIKAV-GYGKARPLVPNTTDENRRLNRRID 654


>gi|302381881|ref|YP_003817704.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192509|gb|ADL00081.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 224

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L A+    GV        +++ +        F  + S   P    VL  + 
Sbjct: 82  NYMDRQQRALEAELSGTGVGVARQGDNLVLRMPSDVT---FAVNQSNIEPRFDAVLSDVA 138

Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL      V+ I GHTD+         N  LS  RA S    L+  GV  +R+  ++G 
Sbjct: 139 GVLQEYDRSVVDIVGHTDS---SGGDAINQPLSERRALSVADALIARGVIRERLF-VAGQ 194

Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339
           +      ++      + NRR++IL+ 
Sbjct: 195 SSRVPVASNATPEGRAQNRRVEILIR 220


>gi|254438169|ref|ZP_05051663.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198253615|gb|EDY77929.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 220

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +        T + +++++       +FD  SS         L  +   +    
Sbjct: 86  EAELRQEMGSSAQIVNTGSQLIVTLPQD---ILFDTGSSALTGGLRNDLNTLAGSMNRFP 142

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              +++ GHTD   +   A  N  LS  RA +   VL++SGV+ +RI  I G        
Sbjct: 143 NSTVNVIGHTD---WDGSAAFNQDLSARRAQAVSAVLIQSGVAPNRIRSI-GRGEDAPIA 198

Query: 323 A--SDPMNSANRRIDILVE 339
              ++     NRR++I + 
Sbjct: 199 TNLNEEGKRQNRRVEITIT 217


>gi|167847521|ref|ZP_02473029.1| ompA family protein [Burkholderia pseudomallei B7210]
          Length = 249

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDL 157
            +    +   G      +          L   + +    N + +              ++
Sbjct: 11  SSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANV 70

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K    +     +    +     +    +  + + Q LA  +++ L+      I  G+  
Sbjct: 71  QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 128

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
             +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHTD   
Sbjct: 129 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN-- 185

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                  N  LS  RA +    L+  G++  +++  +G    +    +D     + NRRI
Sbjct: 186 -SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRI 243

Query: 335 DI 336
           + 
Sbjct: 244 EF 245


>gi|293194235|ref|ZP_06609957.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
           F0309]
 gi|292819754|gb|EFF78767.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
           F0309]
          Length = 235

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 17/130 (13%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276
                G +I++ D     +FD   S    +    L K+  VL         I GHTD+  
Sbjct: 111 PVESCGTVITLED---GVLFDFGKSDIRSDAAHTLSKLATVLNDAKVPAAHIYGHTDSI- 166

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
             +    N +LS +RA +    L K GVS   I   +G+   +    ++           
Sbjct: 167 --SDEAFNLQLSQERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGR 222

Query: 329 SANRRIDILV 338
           + NRR++I +
Sbjct: 223 ALNRRVEIFI 232


>gi|283956854|ref|ZP_06374327.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283791580|gb|EFC30376.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|157415702|ref|YP_001482958.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386666|gb|ABV52981.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307748343|gb|ADN91613.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315930990|gb|EFV09965.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|148925647|ref|ZP_01809335.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845657|gb|EDK22748.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|123444325|ref|YP_001008290.1| putative outer membrane lipoprotein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091286|emb|CAL14172.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 219

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|57238501|ref|YP_179632.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
 gi|57167305|gb|AAW36084.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
 gi|315058932|gb|ADT73261.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|15639711|ref|NP_219161.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025949|ref|YP_001933721.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
           SS14]
 gi|3024159|sp|O07887|MOTB_TREPA RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|2196896|gb|AAB61254.1| MotB [Treponema pallidum]
 gi|3323025|gb|AAC65689.1| flagellar motor rotation protein (motB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018524|gb|ACD71142.1| flagellar motor rotation protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060088|gb|ADD72823.1| chemotaxis protein MotB [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 238

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
           ++ Q LA  +   +S    +     +   +   G++IS+        F   SS     E+
Sbjct: 81  EKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTSD---SFFYPGSSDLNVEES 137

Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304
              L ++ + L+          I GHTD+         DNW LS  RA      L   G 
Sbjct: 138 REALLRVAQFLSDHALAGRRFRIEGHTDSVEVPEDGSTDNWELSTRRAVRVLHYLTDFGA 197

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            E+R   ++G+A  R K +++       NRR+DI++ D
Sbjct: 198 QENRF-SLAGYADTRAKFSNESPEGRAYNRRVDIVILD 234



 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF--NPFG 73
          + +K+ A          W   Y+D +T+++ FF++++     D    ++I      +P G
Sbjct: 1  MARKRRAPRGAAQG---WLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTG 57

Query: 74 KNLMTASKGIFDEQNP 89
            +  +S  + D  N 
Sbjct: 58 GGVSASSGRLADLGNT 73


>gi|121612147|ref|YP_001001127.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006020|ref|ZP_02271778.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249779|gb|EAQ72738.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|86152850|ref|ZP_01071055.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|85843735|gb|EAQ60945.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|86149287|ref|ZP_01067518.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86152031|ref|ZP_01070244.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596498|ref|ZP_01099735.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|205356091|ref|ZP_03222858.1| outer membrane fibronectin binding protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|218563079|ref|YP_002344858.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85840069|gb|EAQ57327.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841139|gb|EAQ58388.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191339|gb|EAQ95311.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360785|emb|CAL35585.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|205345934|gb|EDZ32570.1| outer membrane fibronectin binding protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|284926685|gb|ADC29037.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni IA3902]
 gi|315927426|gb|EFV06764.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930550|gb|EFV09590.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 319

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|15641208|ref|NP_230840.1| putative lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587785|ref|ZP_01677544.1| lipoprotein, putative [Vibrio cholerae 2740-80]
 gi|121728252|ref|ZP_01681285.1| lipoprotein, putative [Vibrio cholerae V52]
 gi|147673077|ref|YP_001216765.1| putative lipoprotein [Vibrio cholerae O395]
 gi|153819084|ref|ZP_01971751.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|153823238|ref|ZP_01975905.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|227081367|ref|YP_002809918.1| putative lipoprotein [Vibrio cholerae M66-2]
 gi|229505212|ref|ZP_04394722.1| outer membrane protein [Vibrio cholerae BX 330286]
 gi|229511118|ref|ZP_04400597.1| outer membrane protein [Vibrio cholerae B33]
 gi|229518237|ref|ZP_04407681.1| outer membrane protein [Vibrio cholerae RC9]
 gi|229608231|ref|YP_002878879.1| outer membrane protein [Vibrio cholerae MJ-1236]
 gi|255745601|ref|ZP_05419549.1| outer membrane protein [Vibrio cholera CIRS 101]
 gi|262158324|ref|ZP_06029440.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
 gi|262169483|ref|ZP_06037175.1| outer membrane protein [Vibrio cholerae RC27]
 gi|298498705|ref|ZP_07008512.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655673|gb|AAF94354.1| lipoprotein, putative [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547949|gb|EAX58030.1| lipoprotein, putative [Vibrio cholerae 2740-80]
 gi|121629503|gb|EAX61929.1| lipoprotein, putative [Vibrio cholerae V52]
 gi|126510367|gb|EAZ72961.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|126519252|gb|EAZ76475.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|146314960|gb|ABQ19499.1| putative lipoprotein [Vibrio cholerae O395]
 gi|227009255|gb|ACP05467.1| putative lipoprotein [Vibrio cholerae M66-2]
 gi|227013112|gb|ACP09322.1| putative lipoprotein [Vibrio cholerae O395]
 gi|229344952|gb|EEO09926.1| outer membrane protein [Vibrio cholerae RC9]
 gi|229351083|gb|EEO16024.1| outer membrane protein [Vibrio cholerae B33]
 gi|229357435|gb|EEO22352.1| outer membrane protein [Vibrio cholerae BX 330286]
 gi|229370886|gb|ACQ61309.1| outer membrane protein [Vibrio cholerae MJ-1236]
 gi|255736676|gb|EET92073.1| outer membrane protein [Vibrio cholera CIRS 101]
 gi|262022296|gb|EEY41005.1| outer membrane protein [Vibrio cholerae RC27]
 gi|262029765|gb|EEY48413.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
 gi|297543038|gb|EFH79088.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 223

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  +S          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++I + 
Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220


>gi|166711089|ref|ZP_02242296.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 264

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 81/263 (30%), Gaps = 8/263 (3%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
           S             + +    +           +  G    +    R+ NN+     S +
Sbjct: 7   SARTLALSGLITAFAVSAQVAAPATGGVGERPVIVEGVVPDQATKARILNNLRDTYGSAR 66

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                   +  S        +  +   + +     L    +   ++ +     Q      
Sbjct: 67  IVDRVQVESIPSPPNWGEYVAKMVSPGLKRVAAGKLEVNGQAVRISGQVVNEAQRQQVAS 126

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
             +L+   +  +   +    +  G+L   +  R    F   SS   P  + +L ++ E +
Sbjct: 127 DLSLASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIE-FQSGSSRLTPLGMRILDEMVEKM 185

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +   +    I GHTD          N  LS  RA +    +++ G+   R++ + G    
Sbjct: 186 SQMKDARFLIIGHTDNV---GQRESNLALSQARAQAVKDYIVQKGIDGARMN-VQGKGPD 241

Query: 319 RLKIASDP--MNSANRRIDILVE 339
           +    +      + NRRI   ++
Sbjct: 242 QPVADNASPDGRARNRRIQFKIQ 264


>gi|89899024|ref|YP_521495.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89343761|gb|ABD67964.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 217

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD +     P    +L +  + L+      I I GHTD++        N  LS++
Sbjct: 105 PSDISFDINRFDIKPNMRPILDQFAQGLSSQPNTEIRIIGHTDST---GSDSINDPLSVN 161

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA SA   L+  GV   RI +I+G   H     ++     + NRRI+I + +R
Sbjct: 162 RAASARDYLVARGVDGRRI-QINGRGSHEPIADNNTERGRAQNRRIEIFLAER 213


>gi|298486507|ref|ZP_07004567.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298158984|gb|EFI00045.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 268

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 89/244 (36%), Gaps = 7/244 (2%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
             H        +  +  QK +              +  E    +    S  G     S  
Sbjct: 23  AGHQDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHY 82

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
              S    E      LS+E++  M  +++   LA + +   S       ++  +     T
Sbjct: 83  AYLSSRYSEIARNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 142

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA 281
                ++      +FD   +         + K+ + L  +   V+ I G+TD++      
Sbjct: 143 ETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST---GDR 199

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           ++N +LS DRA +   VLM  GV E RI  + G++      A+      + NRR++I+  
Sbjct: 200 QENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYSQQFPVNANASERGRAQNRRVEIVFS 258

Query: 340 DRQG 343
           D +G
Sbjct: 259 DEKG 262


>gi|317152528|ref|YP_004120576.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942779|gb|ADU61830.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 352

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 8/142 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGE 257
           +      +   N+    +       +     +     + F         E I VL++   
Sbjct: 212 MDQYARDVFYSNVADAPVVTPVAAPVDTMGKETITFSLHFGFDKYQITDEMIPVLEQAKI 271

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L  +      I GHTD++        N  LS  RA S  + ++ +GV+  R+    G+ 
Sbjct: 272 ILDENPSASYIIAGHTDST---GPDAYNQGLSERRAGSVREWMVANGVNTSRLES-KGYG 327

Query: 317 HHRLKIASDPMNSA--NRRIDI 336
               K  +        NRR++I
Sbjct: 328 ELSPKYDNATSEGRKLNRRVEI 349


>gi|53715977|ref|YP_106445.1| hypothetical protein BMAA1914 [Burkholderia mallei ATCC 23344]
 gi|52421947|gb|AAU45517.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
          Length = 426

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 316 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 375

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 376 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 426


>gi|332667579|ref|YP_004450367.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336393|gb|AEE53494.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 239

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +  + +++      E    GI ++   Q    +FD   S  +      L+   E L  + 
Sbjct: 93  AKKMEEDLGNTATVERVGEGIKVTFNSQL---LFDFGKSSLMESNKQTLESFAETLKQNP 149

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD          N  LS +RA +    L   GVS  R+  I G    +  +
Sbjct: 150 DTDLLIVGHTDNV---GSDAFNQSLSENRAAAVSNHLSTFGVSSSRLK-IQGMGEKQPLV 205

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
           A+      + NRR++I +   +
Sbjct: 206 ANTTESERAQNRRVEIAIIANE 227


>gi|323524556|ref|YP_004226709.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1001]
 gi|323381558|gb|ADX53649.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1001]
          Length = 442

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  + +   V  +       ++    R   MF   ++        ++ KI   +      
Sbjct: 309 LKDEIVAGTVSVDEDAHHSSVTF---RGDAMFPPGAASVNASMAPLIAKIAAEIVKVPGK 365

Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           + + G+TD  P R+     N  LS +RA    Q+L  SGV   R+  + G         +
Sbjct: 366 VMVFGYTDNVPIRSRQFASNDALSAERATQVLQMLQASGVPAGRLEAV-GRGEAAPVGDN 424

Query: 325 DPM--NSANRRIDILV 338
                 + NRR++I V
Sbjct: 425 RTAQGRAQNRRVEIAV 440


>gi|162453582|ref|YP_001615949.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161164164|emb|CAN95469.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 323

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 12/279 (4%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +       P   +    +    +     E  +    DL+          +        ++
Sbjct: 48  EGAASRLAPAQLDTAKQALSRAEGAFGEEPEAPQTRDLAYIADRKAQEAEAAAALLQAQR 107

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                E+    LS  Q +   +   +   +  ++       E +  + E+  L   ++  
Sbjct: 108 DKAAAEDAFKDLSQQQLASAREALHSGQQQIERERHARAQAETAQQQAESARL--QAESA 165

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A ++ ++  + A++ +  ++     ++ +    +  + G++I++       +F    S
Sbjct: 166 RTAAEKARQEAEAARREAERVANAALASLKEIAAVKEEKRGVVITL---SGAVLFASGKS 222

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
             LP     L ++   L       I I GHTD++     A+ N +LSL+RA +    L+ 
Sbjct: 223 ELLPIAKEKLSQVAATLKDQGSPPIRIEGHTDST---GSAQANRKLSLERADAVKAHLIT 279

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +G+  D+I+ + G    R    +        NRR++I+V
Sbjct: 280 AGLPGDKIATV-GHGPDRPVADNSSTEGRANNRRVEIIV 317


>gi|254189637|ref|ZP_04896147.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|157937315|gb|EDO92985.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 558

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D               +F
Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546


>gi|299770678|ref|YP_003732704.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
 gi|298700766|gb|ADI91331.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
          Length = 255

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKSIPADHLSA-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255


>gi|237740757|ref|ZP_04571238.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
 gi|229422774|gb|EEO37821.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
          Length = 173

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 10/132 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            +GV        +++S+       +FD             L  + + L  + +  I I G
Sbjct: 48  QEGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLATLAKALGENKDIHIKIDG 104

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           +TD   F      N  LS+ RA +    L+  G     I  I G+        +      
Sbjct: 105 YTD---FIGTEAYNLELSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNKTEAGR 160

Query: 329 SANRRIDILVED 340
           S NRR++ ++  
Sbjct: 161 SRNRRVEFIISR 172


>gi|26987509|ref|NP_742934.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24982176|gb|AAN66398.1|AE016267_7 OmpA family protein [Pseudomonas putida KT2440]
          Length = 236

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 84  DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 140

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   RI  + G    
Sbjct: 141 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 196

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++      + NRR+++ ++
Sbjct: 197 QPIASNADANGRAQNRRVEVNLK 219


>gi|237742388|ref|ZP_04572869.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
 gi|256845716|ref|ZP_05551174.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294785038|ref|ZP_06750326.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
 gi|229430036|gb|EEO40248.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
 gi|256719275|gb|EEU32830.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
 gi|294486752|gb|EFG34114.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
          Length = 182

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD    +   +    L  + + L  + +  I I G+
Sbjct: 58  EGVTIRREGNNLILSM---PELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGY 114

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   F      N  LS+ RA +    L+  G     I  I G+        +      S
Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170

Query: 330 ANRRIDILVED 340
            NRR++ ++  
Sbjct: 171 RNRRVEFIISR 181


>gi|110638331|ref|YP_678540.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281012|gb|ABG59198.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 424

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
              +F +S    LPE+   L ++   +    ++   + GHTD          N +LS +R
Sbjct: 317 KHVLFVQSKDDFLPESYAELDRLVATMNQHPQITIEVSGHTDNQ---GNRDLNLKLSEER 373

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A      L+  G+   RI+ + G+   +   A+D       NRR++  +
Sbjct: 374 AIKVKDYLVSRGIEAKRIN-VKGYGPDKPISANDTEEHRRLNRRVEFEI 421


>gi|28898041|ref|NP_797646.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308094661|ref|ZP_05890745.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308095662|ref|ZP_05907484.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308125455|ref|ZP_05775378.2| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|308126686|ref|ZP_05911817.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|28806255|dbj|BAC59530.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308088657|gb|EFO38352.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308091164|gb|EFO40859.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308107632|gb|EFO45172.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308115580|gb|EFO53120.1| outer membrane protein [Vibrio parahaemolyticus K5030]
          Length = 222

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L    +  GV  +      L  ++   N   F  SS          L+ +  +L
Sbjct: 83  DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 140

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  G+TD++        N  LS  RA S  Q L+   V+  R     G+   
Sbjct: 141 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 196

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I + 
Sbjct: 197 NPICSNQTSEGRACNRRVEIQIL 219


>gi|124267239|ref|YP_001021243.1| outer membrane protein [Methylibium petroleiphilum PM1]
 gi|124260014|gb|ABM95008.1| outer membrane protein [Methylibium petroleiphilum PM1]
          Length = 235

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD   S   PE   VL      L       + + GHTD++        N  LS+D
Sbjct: 116 PSDISFDTGKSAIKPELRTVLDSFANGLANDPALQVRVIGHTDST---GSDAINNPLSVD 172

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L   G+   RI   SG   H     +      + NRR++IL+ + +
Sbjct: 173 RAQSVRDYLAGRGILPTRIET-SGRGSHEPIADNTSEAGRAKNRRVEILLREPE 225


>gi|167818176|ref|ZP_02449856.1| OmpA family membrane protein [Burkholderia pseudomallei 91]
          Length = 541

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 366 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 425

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 426 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 482

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 483 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 529


>gi|163801667|ref|ZP_02195565.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
 gi|159174584|gb|EDP59386.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
          Length = 216

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239
           A  R+  LQ   +  S  L   +A+    G+      T I           +     F  
Sbjct: 50  AQHRQSFLQIEQQSDSGELKQALAEKSKLGLDKSGCMTWISNQDKHHTGEGLVARLHFGF 109

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             S   P     L+++   L      I++ GHTD    +     N  L L RA +A   L
Sbjct: 110 DHSSLTPMGKKALKQLASSLNKRDSAITVDGHTDN---KGSDGYNQDLGLRRALAASNGL 166

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             +GV  + I  +  F       ++      + NRR++I V D+
Sbjct: 167 TNAGVDNNNIV-VRSFGESEPMASNATPEGRAQNRRVEIWVADK 209


>gi|167913324|ref|ZP_02500415.1| OmpA family membrane protein [Burkholderia pseudomallei 112]
          Length = 542

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 426

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530


>gi|167896753|ref|ZP_02484155.1| hypothetical protein Bpse7_23620 [Burkholderia pseudomallei 7894]
          Length = 389

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 279 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 338

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 339 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 389


>gi|124008000|ref|ZP_01692700.1| peptidoglycan associated periplasmic protein, putative [Microscilla
           marina ATCC 23134]
 gi|123986584|gb|EAY26383.1| peptidoglycan associated periplasmic protein, putative [Microscilla
           marina ATCC 23134]
          Length = 472

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD +S+     + + L ++ ++L  + +V  SI  HTD          N +LS  R
Sbjct: 363 NDIYFDFNSAALKDSSFIELNRVVKMLQTNPKVKLSIEAHTDNV---GSKAKNLKLSNRR 419

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI-LVEDRQ 342
           A S    L +  + ++R+    GF   R  + +      + NRR+++ ++   Q
Sbjct: 420 AKSVADYLKEKKIDQNRLVT-KGFGEDRPLVPNTSKKNKAKNRRVELRVIRSTQ 472


>gi|260172785|ref|ZP_05759197.1| putative flagellar motor protein MotB [Bacteroides sp. D2]
          Length = 256

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 20/216 (9%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLA 196
            Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L 
Sbjct: 26  AQMSAQIKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINELQ 85

Query: 197 KKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
             I +           +   +       +        + +++ D+    +F   S+    
Sbjct: 86  DMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLDK 142

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-G 303
                L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+  
Sbjct: 143 RGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYN 202

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           V+  +I + SG   +     ++       NRR +I+
Sbjct: 203 VNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 237


>gi|167896642|ref|ZP_02484044.1| OmpA family membrane protein [Burkholderia pseudomallei 7894]
          Length = 541

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 366 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 425

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 426 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 482

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 483 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 529


>gi|145219523|ref|YP_001130232.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
           DSM 265]
 gi|145205687|gb|ABP36730.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
          Length = 229

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D+ V+G   E     I +      +  +F   SS     +   ++K+  +L   +
Sbjct: 82  QAEEIDSQVEGARVERVGESIRVVF---DSGILFSTGSSTLTSTSRYNIEKLARILNRYS 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
               +  GHTDA         N  LS  RA S   +L   GVS  R+S + G+   R   
Sbjct: 139 NTNLVIEGHTDAI---GAESLNQTLSERRAESVANLLAGYGVSRYRLSPV-GYGETRPIA 194

Query: 323 ASDPMNSA--NRRIDILV 338
           +++       NRR+++L+
Sbjct: 195 SNETEYGRRLNRRVEVLI 212


>gi|311746197|ref|ZP_07719982.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
 gi|126576424|gb|EAZ80702.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
          Length = 640

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               FD       PE++  L+++ + L  ++ V   I GHTD          N  LSL R
Sbjct: 535 ENIFFDFDKYDLKPESLSSLKRLLKFLKENSNVNILISGHTDNV---GSPSYNQELSLKR 591

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           A S  Q L++ G+   R+  + G       +   +    + NRRI + V 
Sbjct: 592 AQSVQQYLVEQGMHPGRVM-VEGKGDKEPMVPNTNSQNQALNRRITVKVL 640


>gi|99082288|ref|YP_614442.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99038568|gb|ABF65180.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 221

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +++    + L        +    T   +++S+ +      F   S+         L+K+ 
Sbjct: 79  RELDKQEAELRQSLDNDSISIVNTGDRLIVSLPNDLT---FATDSAAISSVVRSDLRKVA 135

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L      ++ + GHTD+      A  N+ LS  RA +    +   GVS  R+ +I G 
Sbjct: 136 GSLQRYPGSIVQVIGHTDSD---GAASYNYSLSERRANAVADEIAAGGVSYGRM-RIIGR 191

Query: 316 AHHRLKIASDPMN--SANRRIDILV 338
              +   ++      + NRR++I++
Sbjct: 192 GEDQPVASNLTPEGKARNRRVEIVI 216


>gi|262041576|ref|ZP_06014773.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041137|gb|EEW42211.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 488

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L + +   +         + V        + +      +  +FD   +     +  VL
Sbjct: 317 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 371

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +       I + G+TD +      + N +LSL RA +    ++++         
Sbjct: 372 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFA 428

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G         +D     +ANRR++I +  R
Sbjct: 429 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 460


>gi|206580585|ref|YP_002236817.1| OmpA domain protein [Klebsiella pneumoniae 342]
 gi|206569643|gb|ACI11419.1| OmpA domain protein [Klebsiella pneumoniae 342]
          Length = 567

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 6/144 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   V  +       +     + +  +   +  +FD   +     +  VL      + 
Sbjct: 399 RQLVWRVIRDYRPPEKKKDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIR 458

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 I + G+TD +      + N +LSL RA +    ++++         + G     
Sbjct: 459 ARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFAVQGLGESH 515

Query: 320 LKIASDP--MNSANRRIDILVEDR 341
               +D     +ANRR++I +  R
Sbjct: 516 PAATNDTPEGRAANRRVEISLVPR 539


>gi|163745692|ref|ZP_02153052.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
 gi|161382510|gb|EDQ06919.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
          Length = 645

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 17/263 (6%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
             N         +   +            + QR    +       +++        D   
Sbjct: 385 EDNTTAAERRAALLAQAEQTLAEEKAVSAEAQRQTELLNQQVAELRAQLGNLQALLDDAV 444

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            +D   S +L+   ++         ++E+  A       + L ++ S  L+   ++   +
Sbjct: 445 ARDAANSVELQSLGSELNTALARVAAEERRRAEMEAAERKRLEEE-SKDLAQYRSEFFGR 503

Query: 214 GVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HST 263
                  + G+ I        +  +F + S++   +    + K+  +L            
Sbjct: 504 LRNLLGNQEGVRIEGDRFVFSSEVLFGQGSAVLSQDGQGEIAKVAGILRSVVDDIPAEID 563

Query: 264 EVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320
            VI + GHTD  P        DNW LS  RA S  + ++   G++ DR+   +GF  ++ 
Sbjct: 564 WVIRVDGHTDNVPLSGFGEFADNWELSQARALSVVKYMVNFLGIAPDRL-AANGFGQYQP 622

Query: 321 KIASDPM--NSANRRIDILVEDR 341
               +     + NRRI++   ++
Sbjct: 623 VAEGNTEAARAQNRRIELKFTEK 645


>gi|149910946|ref|ZP_01899577.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
 gi|149806013|gb|EDM65997.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
          Length = 457

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                L  + +   V+ +     I I I       +F   S    P    +++KI   L 
Sbjct: 317 KLEQLLQTEIMRNIVVVQELSDRIRIRITSSD---LFASGSDQINPAYQPIIRKIARTLE 373

Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   I I GHTD     +     NW LSL RA S   VL K      R+    G     
Sbjct: 374 STQGQILITGHTDKQQIISSRYPSNWHLSLARATSIADVLAKDTRLGGRLLP-EGRGSSE 432

Query: 320 LKIASDP----MNSANRRIDILVED 340
                       ++ NRR++I +  
Sbjct: 433 PLAVDPTFSHDQHALNRRVEIDILR 457


>gi|67642544|ref|ZP_00441299.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
 gi|121597981|ref|YP_990526.1| hypothetical protein BMASAVP1_0927 [Burkholderia mallei SAVP1]
 gi|124381968|ref|YP_001025016.1| hypothetical protein BMA10229_1214 [Burkholderia mallei NCTC 10229]
 gi|126447715|ref|YP_001079360.1| hypothetical protein BMA10247_A2189 [Burkholderia mallei NCTC
           10247]
 gi|166999157|ref|ZP_02265003.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254176494|ref|ZP_04883152.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
 gi|254203448|ref|ZP_04909809.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254205327|ref|ZP_04911680.1| OmpA family protein [Burkholderia mallei JHU]
 gi|254299607|ref|ZP_04967056.1| OmpA domain protein [Burkholderia pseudomallei 406e]
 gi|254356134|ref|ZP_04972411.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|121225779|gb|ABM49310.1| OmpA domain protein [Burkholderia mallei SAVP1]
 gi|126240569|gb|ABO03681.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
 gi|147745687|gb|EDK52766.1| OmpA family protein [Burkholderia mallei FMH]
 gi|147754913|gb|EDK61977.1| OmpA family protein [Burkholderia mallei JHU]
 gi|148025117|gb|EDK83286.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|157809319|gb|EDO86489.1| OmpA domain protein [Burkholderia pseudomallei 406e]
 gi|160697536|gb|EDP87506.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
 gi|238523712|gb|EEP87149.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
 gi|243064713|gb|EES46899.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|261826580|gb|ABM99761.2| OmpA domain protein [Burkholderia mallei NCTC 10229]
          Length = 421

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421


>gi|114763629|ref|ZP_01443023.1| hypothetical protein 1100011001335_R2601_16020 [Pelagibaca
           bermudensis HTCC2601]
 gi|114543630|gb|EAU46643.1| hypothetical protein R2601_16020 [Roseovarius sp. HTCC2601]
          Length = 465

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 10/213 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
               +L+          +    S       ++   + +                      
Sbjct: 256 WTPVWLAGGLTLLGVCAAFAGFSFALNGSTEALRGQIAALDVAGPVTLDRPAPPPPPAPP 315

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             R  + A+ +++ L   + + +   V  E++   + + I       MF  +S    P  
Sbjct: 316 APREVETAESVTAFLQPEIDEGL---VTVESSGNTLTVQI---SGANMFAPASDTLEPRF 369

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
             V+ ++   L      I + GH+D  P        N  LSL RA    + + ++ V   
Sbjct: 370 AEVVDRVAGALNEEGGQIIVAGHSDNIPINTARFPSNLALSLARAKFVMERISQTLVDSS 429

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RIS   G A      ++D     + NRRI++++
Sbjct: 430 RISA-EGRADREPIASNDTPEGRAKNRRIEVIL 461


>gi|237509611|ref|ZP_04522326.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           pseudomallei MSHR346]
 gi|235001816|gb|EEP51240.1| type VI secretion system OmpA/MotB family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 421

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421


>gi|254189549|ref|ZP_04896059.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|157937227|gb|EDO92897.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 421

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421


>gi|320535353|ref|ZP_08035469.1| OmpA family protein [Treponema phagedenis F0421]
 gi|320147797|gb|EFW39297.1| OmpA family protein [Treponema phagedenis F0421]
          Length = 437

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 12/143 (8%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +  + +      +        I I++ D R    F   S   LPE    +  I   L   
Sbjct: 303 IKKMFSKETPDSINMRPGINTIKITMYDIR----FIADSPEILPEEKGRVDIIARALRAM 358

Query: 263 --TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                  I GHT              LS+ RA    + L K G+   R++   G+   R 
Sbjct: 359 GPYTKFLIEGHTADINQPKNQ---LVLSVARADKIAEELAKRGIDASRMTTA-GYGGTRP 414

Query: 321 KIASDP--MNSANRRIDILVEDR 341
              +D     + NRR++I +   
Sbjct: 415 IAPNDTSPNRAKNRRVEITIMRD 437


>gi|262068085|ref|ZP_06027697.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
 gi|291378171|gb|EFE85689.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
          Length = 183

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             +GV        +++S+       +FD             L  + + L  + +  I I 
Sbjct: 57  NQEGVTIRREGNNLILSM---PELILFDFDKYAVKEGIKPSLATLAKALGENKDIHIKID 113

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           G+TD   F      N  LS+ RA +    L+  G     I  I G+        +     
Sbjct: 114 GYTD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAG 169

Query: 328 NSANRRIDILVED 340
            S NRR++ ++  
Sbjct: 170 RSRNRRVEFIISR 182


>gi|189502647|ref|YP_001958364.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498088|gb|ACE06635.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 656

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 7/143 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +S    D+             I I+         F         ++ + L ++   L 
Sbjct: 514 KYISYKNQDHSPIISEETVVLQPIEINQTKILKNVYFKYDEYSLNKKSYIELDRLVAFLK 573

Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            + ++   + GHTD          N +LS  RA + Y+ L+++G++ DR++   G+   R
Sbjct: 574 TNPDITIELEGHTDHI---GSDEYNQQLSTKRAKAIYEYLLQAGIANDRVN-YKGYGKTR 629

Query: 320 LKIASDPMN--SANRRIDILVED 340
               +D       NRR+   +  
Sbjct: 630 PIAPNDSQENQQLNRRVAFRITR 652


>gi|294782096|ref|ZP_06747422.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
 gi|294480737|gb|EFG28512.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
          Length = 183

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 10/132 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            +GV        +++S+       +FD    +        L  + + L  + +  I I G
Sbjct: 58  QEGVTIRREGNNLILSM---PELILFDFDKYVVKDGIKPSLATLAKALGENKDIHIKIDG 114

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           +TD   F      N  LS+ RA +  + L+  G     I  I G+        +      
Sbjct: 115 YTD---FIGTEAYNLDLSVKRARAIKEFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGR 170

Query: 329 SANRRIDILVED 340
           S NRR++ ++  
Sbjct: 171 SRNRRVEFIISR 182


>gi|163801079|ref|ZP_02194979.1| putative lipoprotein [Vibrio sp. AND4]
 gi|159175428|gb|EDP60225.1| putative lipoprotein [Vibrio sp. AND4]
          Length = 219

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 15  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 74

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  E      L  ++   N   F  SS          L+ 
Sbjct: 75  VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFTSSSYQLDSSIHNTLRG 132

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAAGRAIA-R 188

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339
           G+       ++      + NRR++I + 
Sbjct: 189 GYGERNPICSNQTSDGRACNRRVEIQIL 216


>gi|121602322|ref|YP_988503.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
           KC583]
 gi|120614499|gb|ABM45100.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
           KC583]
          Length = 174

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS+   +   +L +  E L         I GH D          N  L   R
Sbjct: 64  DRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDR---GTREYNLALGQRR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L+  GVS  R+  +S +   R           + NRR+ I +   +G
Sbjct: 121 AIAVRDYLVSLGVSPQRMKTMS-YGKERPVAVCDDISCWNQNRRVVISITSGRG 173


>gi|238793173|ref|ZP_04636801.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
 gi|238727546|gb|EEQ19072.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
          Length = 219

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD+         N  LS  RA S    L+  GV+ +RI + SG  
Sbjct: 137 VLKEYDKTAVNVTGYTDS---SGARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|282877937|ref|ZP_06286746.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281299938|gb|EFA92298.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 227

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 9/146 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  V +  V+ V  +     + ++     +  +F  S +     +   L K 
Sbjct: 72  MDKVAQETAAQVENAKVEEVKDKNGLDAVKVTF---DSGILFASSKANLNQTSKNELAKF 128

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL ++ +  I + GHTD++        N  LS DRA S    L   GV   +   + G
Sbjct: 129 STVLKNNKDCHIDVYGHTDST---GNDGINIPLSNDRARSVVNYLKSCGVPSSQFQNVVG 185

Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338
               +    +        NRR+++ +
Sbjct: 186 QGSTQPVADNATKAGRQLNRRVEVFL 211


>gi|19703678|ref|NP_603240.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19713798|gb|AAL94539.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 172

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD             L  + + L  + +  I I G+
Sbjct: 48  EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 104

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   F      N  LS+ RA +    L+  G     I  I G+        +      S
Sbjct: 105 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 160

Query: 330 ANRRIDILVED 340
            NRR++ ++  
Sbjct: 161 RNRRVEFIISR 171


>gi|323189288|gb|EFZ74571.1| inner membrane lipoprotein yiaD [Escherichia coli RN587/1]
          Length = 219

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+         L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKLAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PANPIASNSTSEGKAQNRRVEITL 216


>gi|167838085|ref|ZP_02464944.1| ompA family protein [Burkholderia thailandensis MSMB43]
          Length = 243

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 82/242 (33%), Gaps = 18/242 (7%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEKGKDL 157
            +    +   G      +          L   + +    N + +              ++
Sbjct: 5   ASPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNWSANV 64

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K    +     +    +     +    ++ + + Q LA  +++ L+      I  G+  
Sbjct: 65  QKLIGPQLKQISKGQLKIDGTQIDVKGEVRNEAQRQQLASDMANALNPTYT--IKNGLRV 122

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
             +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHTD   
Sbjct: 123 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAAALAKMSNRTVEIIGHTDN-- 179

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                  N  LS  RA +    L+  G++  +++  +G    +   ++D     + NRRI
Sbjct: 180 -SGNRTSNIALSQARADAVKGYLVAKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRI 237

Query: 335 DI 336
           + 
Sbjct: 238 EF 239


>gi|167848084|ref|ZP_02473592.1| OmpA family protein [Burkholderia pseudomallei B7210]
          Length = 531

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519


>gi|228964710|ref|ZP_04125817.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794960|gb|EEM42459.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 223

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 75/217 (34%), Gaps = 9/217 (4%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +   ++        F              +    +    L K  +      + +   +  
Sbjct: 3   SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 62

Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +       +K + +    ++   L   V +N +  V      TG+ + I+D     +
Sbjct: 63  TIPDISHEKNDEKIISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           FD   +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA + 
Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331
              L++   V + R++ + G+A  +  + +D     N
Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDS--PQN 213


>gi|189464066|ref|ZP_03012851.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
           17393]
 gi|198275155|ref|ZP_03207686.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
 gi|298482396|ref|ZP_07000582.1| outer membrane protein [Bacteroides sp. D22]
 gi|189438400|gb|EDV07385.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
           17393]
 gi|198271975|gb|EDY96245.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
 gi|298271375|gb|EFI12950.1| outer membrane protein [Bacteroides sp. D22]
          Length = 213

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 19/195 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            ++   +  +++   +     +  L    ++K +  K + R   L      ++S     N
Sbjct: 34  DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             +                  ++  +F   S     E   +L  +  +++      I I 
Sbjct: 94  GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIISEIPNTKIKII 141

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           GHTD        + N  LS +RA +    L  +G+  + I++  G  +      +     
Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++I + + +
Sbjct: 198 RAKNRRVEIFITNDE 212


>gi|124003886|ref|ZP_01688734.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
 gi|123990941|gb|EAY30408.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
          Length = 389

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               F+ + +  LP +   L K+  +L    ++   I GHTD          N +LS  R
Sbjct: 284 KNIFFEFAKARLLPASFPELDKLVNLLTTHPQIKVRIMGHTDNV---GTDTRNLQLSNRR 340

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A S    L K G+  +R+    GF   R   ++        NRR++ +V 
Sbjct: 341 AKSVVTYLKKQGIRANRL-TFKGFGESRPIDSNVTKEGRQKNRRVEFVVL 389


>gi|254848320|ref|ZP_05237670.1| lipoprotein [Vibrio cholerae MO10]
 gi|254844025|gb|EET22439.1| lipoprotein [Vibrio cholerae MO10]
          Length = 222

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  +S          L+ + 
Sbjct: 83  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 137

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 138 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 193

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++I + 
Sbjct: 194 GERFPLCSNNTAEGRACNRRVEIQIL 219


>gi|167585789|ref|ZP_02378177.1| ompA family protein [Burkholderia ubonensis Bu]
          Length = 166

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++  F  +     P    +L  +   L  + +V  S+ G+TD++     A  N  LS +
Sbjct: 56  PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVVGYTDST---GSAGLNQTLSQN 112

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L + GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 113 RAQSVVNALTQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 165


>gi|187477259|ref|YP_785283.1| hypothetical protein BAV0750 [Bordetella avium 197N]
 gi|115421845|emb|CAJ48363.1| probable outer membrane protein [Bordetella avium 197N]
          Length = 216

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K ++      + +   L+  +A            R  ++   I    + +
Sbjct: 43  QLSVKLDEEVKERQAETQRRETLEQALAVPLAGG----------RVTLVDGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   +L  + E L        E++ + G TD            DNW LS 
Sbjct: 93  FALNSDQLQPEGRELLMSLAEPLKTYLQSRDEILMVSGFTDNQRVSEHNRRFSDNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +  + L+ +G+    +   + F   +   ++D     + NRR++I
Sbjct: 153 QRALTVTRALIDAGIPASSLFAAA-FGSEQPVASNDDAEGQAKNRRVEI 200


>gi|113968495|ref|YP_732288.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113883179|gb|ABI37231.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 487

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L      +   G+  E     I           +F+  S   LPE   V++ +   L 
Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318
            + +    + GHTD    +     N  LS  RA +  ++L    G+   ++  + G   H
Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTTSHGIPTQQLEAV-GIGEH 460

Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341
               ++        NRR+++++   
Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485


>gi|332525185|ref|ZP_08401360.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108469|gb|EGJ09693.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 211

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +   F    +   P    VL +  + L   T  + I GHTD++        N  LSL R
Sbjct: 103 PSDLSFAVGRADLQPSLRPVLDQFAKGL-DQTMHVRIVGHTDST---GSDAINDPLSLAR 158

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           A +    L   GV   R+ +I+G         +  D   + NRR++I + + 
Sbjct: 159 ARTVRDYLEDRGVPAARL-EIAGRGSREPVADNGSDAGRAKNRRVEIFLREP 209


>gi|254262577|ref|ZP_04953442.1| OmpA family protein [Burkholderia pseudomallei 1710a]
 gi|254213579|gb|EET02964.1| OmpA family protein [Burkholderia pseudomallei 1710a]
          Length = 542

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D               +F
Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 426

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530


>gi|253572950|ref|ZP_04850347.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|254885124|ref|ZP_05257834.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
 gi|251837477|gb|EES65571.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|254837917|gb|EET18226.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
          Length = 213

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            ++   +  +++   +     +  L    ++K +  K + R   L      ++S     N
Sbjct: 34  DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             +                  ++  +F   S     E   +L  +  ++       I I 
Sbjct: 94  GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSNLCNIITEIPNTKIKII 141

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           GHTD        + N  LS +RA +    L  +G+  + I++  G  +      +     
Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++I + + +
Sbjct: 198 RAKNRRVEIFITNDE 212


>gi|254784323|ref|YP_003071751.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
           turnerae T7901]
 gi|237683781|gb|ACR11045.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
           turnerae T7901]
          Length = 373

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 71/208 (34%), Gaps = 21/208 (10%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           + YL     +     ++         +   +D+             P+            
Sbjct: 169 LSYLWGGSDAPRKSGAVRAKDTDNDGVPDPSDV-----CANTPSGAPVDTRGCALDTDAD 223

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            + D      +T + L  D+    V    T     ISI  + N   FD  S++  PE   
Sbjct: 224 GVADYLDNCPATAARLKVDDRGCPVTLSET-----ISINLKVN---FDSGSAVVKPEFFS 275

Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308
            ++K+ + +A        I+GHTD S     A  N  LS  RA +   VL+ + GV+  R
Sbjct: 276 EIRKVADFMAQYENTRVEIQGHTDTSC---AAAYNKSLSQRRASAVAAVLISEYGVAASR 332

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRI 334
           +    G+   +             NRR+
Sbjct: 333 VDA-RGYGEEQPIADESTAAGRLANRRV 359


>gi|162448691|ref|YP_001611058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161159273|emb|CAN90578.1| Probable outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 351

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 87/291 (29%), Gaps = 17/291 (5%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           + Q      +  +   +   D+     +S++ +   +  E   +++    I     +   
Sbjct: 46  VRQGLYDEARAEIQRERDAGDKARAEAQSARAEAQSARAEAAQRSAQVAAIKEELARLSD 105

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                ++     +         L       ++L            +       LS E   
Sbjct: 106 DLRARDLRLSEATTAEAGLARRLDELIAMNEELSARLRSAGQSVGQLAGERGSLSAELAE 165

Query: 185 AMKRKKRLQDLAKK-------ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              +   L+            I   +  L        V        ++I +       +F
Sbjct: 166 TRAKLDDLRRKQAAAEARAAGIRDAVDRLKGAAFAGKVRVGLRAGQLVIEVPSD---ALF 222

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF---RNIARDNWRLSLDRAY 293
           + + +   PE    L  I  VL         +  HTD             +W LS  RA 
Sbjct: 223 NGARAELTPEGRAALDDIAGVLRTMPAFRFQVAAHTDNDRKAMKSARFSSSWDLSAARAT 282

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           +  + L++ G+S   +S + G+        +D     + NRR++ILV   Q
Sbjct: 283 AVVKRLVERGMSPRGLSTV-GYGEFSPVGPNDTEAGRARNRRVEILVVAEQ 332


>gi|163788219|ref|ZP_02182665.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
           ALC-1]
 gi|159876539|gb|EDP70597.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
           ALC-1]
          Length = 285

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 78/243 (32%), Gaps = 10/243 (4%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              +      + +   K      +            E   +    +    K     T+L 
Sbjct: 28  EAQQKETQDLLNTATVKLNSCLSDAAAANARVEAMKEQLADMRKSNDALIKSSQDLTELT 87

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222
                     L  L +  +   + +  L        + ++ L  +       +     + 
Sbjct: 88  SQGATNLEKSLESLRESNLKITRLQDALTRKDSVTLAIVTSLKKEVGINDSDIEINVEKG 147

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281
            + ISI D+    +F   S         +L K+ +V+    +    +  HTD   +    
Sbjct: 148 VVFISIADKL---LFKSGSYNVTDRANEILGKVAKVINSKPDFEAMVESHTDNKSYSKPP 204

Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             DNW LS+ RA +  +VL    V+  ++    G + +   + +D     + NRR  I+V
Sbjct: 205 LLDNWDLSVKRATAIVRVLESLNVNPQQLIAA-GRSSYVPLVENDTAENRAKNRRTRIVV 263

Query: 339 EDR 341
             +
Sbjct: 264 LPK 266


>gi|298530630|ref|ZP_07018032.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510004|gb|EFI33908.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 241

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +++ R++DL          +    + + +       GI + +       +F  + +   P
Sbjct: 86  EKEDRIKDLLFPEEELPPEISKSTLEENLEILMRPEGIALMMT---GELLFPFAETRLQP 142

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +   +L ++  ++      +++ G+TD  P   I  DN+  + +RA +  + L+ + V +
Sbjct: 143 QARQILDQVIPLVKAWPAPVNVAGYTDNIP--GIHMDNYEFAAERAMAVMEYLLINDVKQ 200

Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            R+  +S +  H     ++     + NRR++IL++ 
Sbjct: 201 QRL-SVSAYGEHFPVGDNETEEGRARNRRVEILLKK 235



 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 38/119 (31%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +            W   ++D +TV++ FF+++  + + D +  + I   F      L   
Sbjct: 3   RRKSKKGGAPKPIWMFTFSDLVTVMLTFFVLVLSMASLDREYVQEIVTVFQQDTGFLTPK 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           + G   ++              +++      +         +     LE N+  L   +
Sbjct: 63  TAGRLPDEFVIIEDVLENPWEILEKEDRIKDLLFPEEELPPEISKSTLEENLEILMRPE 121


>gi|313205096|ref|YP_004043753.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312444412|gb|ADQ80768.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 426

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 98/308 (31%), Gaps = 22/308 (7%)

Query: 49  LVMWI------INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI 102
           ++M+       +   +     +    +   G  L      + D        S++  D   
Sbjct: 121 VLMYASINLMNLLVPNRTAFWSKMNIYGDAGVGLGFYQFKLTDATGNVIVDSRDLGDGVP 180

Query: 103 DEHITKNSVDLK---IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
           +  + K  ++L+     +     + Q    +   L     S+   ++LT           
Sbjct: 181 ETPMAKLGLNLEYNISRTIALGGEVQYRYYDRTNLGGYTMSKGNSDALTATIGLKFKFGA 240

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA-----KKISSTLSGLVADNIVKG 214
           +   + + N     + P  +   I  + +   ++ +      +  + +L+  +       
Sbjct: 241 TGSKQHARNISMCEYYPQPAPVIIEKIVKDNTIETINRLNALEAKNDSLNAKIKKMNDDL 300

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHT 272
                +R+     +        F+  S      +   L +I   L   +  +   + G+T
Sbjct: 301 DSISNSRSNEPGVLKSSFQNIEFEFGSDKLTTNSYATLDQIALTLKDKSAKVRLSVAGYT 360

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           D   +      N  LS+ RA S    L+  GV    +  I+G+        ++      A
Sbjct: 361 D---YIGTEEYNQILSVKRANSVRIYLLNKGVPASSV-TITGYGEKDPVANNNTDKGRQA 416

Query: 331 NRRIDILV 338
           NRR++  +
Sbjct: 417 NRRVEFQI 424


>gi|260891212|ref|ZP_05902475.1| OmpA family protein [Leptotrichia hofstadii F0254]
 gi|260859239|gb|EEX73739.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 172

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             N   FD +S+    E    L+K+ + +    + ISI G+TD+   +     N  LSL 
Sbjct: 65  DANQLKFDFNSATIKEEYTPALKKLKDYIEAKNQKISIIGYTDS---KGTREYNRELSLR 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA S  + L+  G+S +RI +  G         +D       NRRI+I
Sbjct: 122 RAESLEEKLIDLGLSPERIIETKGNGDANPVATNDTEEGRAANRRIEI 169


>gi|260911422|ref|ZP_05918013.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634469|gb|EEX52568.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 225

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 6/149 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K +               V   T   G+    +   +  +F  + ++    +   L K  
Sbjct: 68  KHMDKVAKRTAEQVKSAKVEEVTDANGLKAVKVTFDSGILFATNKAVLSQSSKNELAKFS 127

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +VL  + +  + I GHTD +        N  LS  RA S    L   GV   +  K+ G 
Sbjct: 128 QVLKENRDCHVDIYGHTDNT---GNDGINIPLSNSRAQSVVNYLSNCGVPRGQFQKVEGK 184

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342
                  ++        NRR+++ +   +
Sbjct: 185 GSSEPVASNASASGRQQNRRVEVYLYASK 213


>gi|238757311|ref|ZP_04618497.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
 gi|238704350|gb|EEP96881.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
          Length = 226

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 87  YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 143

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA S    L+  GV+ +RI + SG  
Sbjct: 144 VLKEYDKTAVNVTGYTDST---GARAHNMTLSQQRADSVGSTLIVQGVAANRI-RTSGAG 199

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 200 PDNPVATNSTAAGKAQNRRVEITL 223


>gi|237744058|ref|ZP_04574539.1| outer membrane porin F [Fusobacterium sp. 7_1]
 gi|256028141|ref|ZP_05441975.1| Outer membrane porin F [Fusobacterium sp. D11]
 gi|260494357|ref|ZP_05814488.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
 gi|289766078|ref|ZP_06525456.1| outer membrane porin F [Fusobacterium sp. D11]
 gi|229431287|gb|EEO41499.1| outer membrane porin F [Fusobacterium sp. 7_1]
 gi|260198503|gb|EEW96019.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
 gi|289717633|gb|EFD81645.1| outer membrane porin F [Fusobacterium sp. D11]
          Length = 182

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD    I   +    L  + + L  + +  I I G+
Sbjct: 58  EGVTIRREGNNLILSM---PELILFDFDKYIVKDKIKPSLSTLAKALGENKDIHIKIDGY 114

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   F      N  LS+ RA +    L+  G     I  I G+        +      S
Sbjct: 115 TD---FIGTEAYNLELSVKRANAIKDFLISRGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170

Query: 330 ANRRIDILVED 340
            NRR++ ++  
Sbjct: 171 RNRRVEFIISR 181


>gi|242280306|ref|YP_002992435.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242123200|gb|ACS80896.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 250

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIAR--DNWRLS 288
            +  +F+        +    ++ +    ++H  + I+I+G+TD +   + +R  DNW +S
Sbjct: 133 PSDVLFNPGQVQLSEKGRNAVKALKNFFISHPDQYINIKGYTDDTQPSSKSRLKDNWEIS 192

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             RA +  + LMK G+  +R++  +G       + ++       NRR++ +++ 
Sbjct: 193 SLRAVNVLRYLMKLGIKPNRLTA-TGLGEMDPLVPNNSKRNRQRNRRVEFVLDK 245



 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
          W   +AD   +L+ FF++++ ++  D        Q 
Sbjct: 25 WITTFADLSMLLLVFFILLYSMSEIDAKKFDMTFQS 60


>gi|254438848|ref|ZP_05052342.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198254294|gb|EDY78608.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 743

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 94/294 (31%), Gaps = 17/294 (5%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           + +              +  +        ++     D      +   + +          
Sbjct: 452 QELSSAAAQRDTFSDDLAAAVAALATAQAQTGVAGADADRKAALLALANNALTQEQALSS 511

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             QR    +     + + E  +     + E   D+  +  +E             L  E+
Sbjct: 512 DNQRQVALLNEQVAALRGEMGRLQALLNLENDADVMANVQIETLTQNLNTAMARALLAER 571

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKS 240
              +  +  L+ +A + +  L    +D +           G+ I        +  +F++ 
Sbjct: 572 RARVLEEAELERMAAE-AVELERYRSDFLGLLRNILEDVDGVRIQGDRFVFSSEVLFEQG 630

Query: 241 SSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI--ARDNWRLSLD 290
           ++    E    + K+  +L             VI + GHTD  P        +NW LS  
Sbjct: 631 AAQLSGEGQREIAKVATILRDVAGDIPESIDWVIRVDGHTDNVPLSGAGEFANNWELSQA 690

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA S    ++    +  +R+   +GF  ++    ++     + NRRI++ + +R
Sbjct: 691 RALSVVLYMVNFLAIPPERL-AANGFGQYQPINPANTTEARAQNRRIELKLTER 743


>gi|124005143|ref|ZP_01689985.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
 gi|123989395|gb|EAY28956.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
          Length = 329

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+     +   L ++ ++L       I I  HTD+         N RLS  RA S 
Sbjct: 226 FATKSARLNTHSFEELGRVVKLLKDHPTSHILIEAHTDSD---GTRLANLRLSQQRAKSV 282

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           Y  LMK G++  R+    G    +    ++     + NRR +++V  +
Sbjct: 283 YNYLMKQGIAAQRLQT-RGAGELKPIAPNNTEINKARNRRFELIVMKK 329


>gi|325103802|ref|YP_004273456.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324972650|gb|ADY51634.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 633

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD +      ++   L  + + L  +    I I+GHTD        + N+ LS +R
Sbjct: 526 KNIFFDTNKYDIKDDSKSELAILIDFLNENKTVNIEIQGHTDNI---GDDKANFVLSENR 582

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A S  + L+  G+   R+ +  GF       ++D     + NRR + L+
Sbjct: 583 AKSVLKYLVNEGIDSKRL-RYKGFGETAPIDSNDNIIGRANNRRTEFLI 630


>gi|255263223|ref|ZP_05342565.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
 gi|255105558|gb|EET48232.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
          Length = 725

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 92/262 (35%), Gaps = 16/262 (6%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
           ++++  +  +     +   ++          +L         +Q      +  T      
Sbjct: 465 EDRLTEAEQQETLLAAARARLAEEQAISDEGQLRIEALNQQVAQLRTQLASLQTLLDVAS 524

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           +    S    +++  + N  L  +++E+    + ++  +   +  +  L    ++   + 
Sbjct: 525 EQDAASDVEIQALGAQLNAALARVAQEQRKRAELEEAERKRLEAEAQDLERYRSEFFGQL 584

Query: 215 VLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTE 264
                 + G+ I        +  +F   S+         + K+  +L             
Sbjct: 585 RDLLEGQDGVRIEGDRFVFASEVLFRPGSADLSDAGRDEIAKVAGILRGVASEIPPSINW 644

Query: 265 VISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321
           VI + GHTD +P        +NW LS  RA S    ++   G+  +R+   +GF  ++  
Sbjct: 645 VIRVDGHTDNTPLSGLGQFANNWELSQARALSVVLYMVNFLGIPPNRL-AANGFGQYQPV 703

Query: 322 I--ASDPMNSANRRIDILVEDR 341
               SD   + NRRI++   +R
Sbjct: 704 TNGDSDQARAQNRRIELKFTER 725


>gi|213964278|ref|ZP_03392508.1| OmpA family protein [Capnocytophaga sputigena Capno]
 gi|213953085|gb|EEB64437.1| OmpA family protein [Capnocytophaga sputigena Capno]
          Length = 949

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           ++   FD   S    +    L  +   L  +  +  +  GH D          N  LS  
Sbjct: 315 KSNVYFDFDKSNIRSDAKNTLDGLLNFLCFNQHLNMVLTGHADDR---GSLDYNQALSER 371

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           RA +     +  G+  +RI  ISG       +  +   +   NRR++I
Sbjct: 372 RAQAVKDFFIAGGLDPNRIK-ISGEGEGNPAVKGNTEEAYQKNRRVEI 418


>gi|88802038|ref|ZP_01117566.1| outer membrane protein [Polaribacter irgensii 23-P]
 gi|88782696|gb|EAR13873.1| outer membrane protein [Polaribacter irgensii 23-P]
          Length = 450

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 82/290 (28%), Gaps = 17/290 (5%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            +++ F+      +  S G+  +    +       D                        
Sbjct: 165 GVKKGFSQNVATHVQHSIGLVIKFGGTDTDGDGVYDKFDACPEVVGLEQFNGCPDADGDG 224

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL-SKEK 182
            +  ++    ++       C ++         D+C      K      +        K+ 
Sbjct: 225 VKDSDDACPEVAGLVAMNGCPDADGDGIADKDDMCPDEKGTKGNKGCPDTDGDGTFDKDD 284

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---TGILIS------IIDQRN 233
             +               +    ++  +     +           +I+      +     
Sbjct: 285 KCSDVAGPTANAGCPWPDTDGDSILDKDDKCPTVAGIASEGGCPEVITNEAKMGMDTFAE 344

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S+         L  +  ++    +   +IRG+TD          N +LS  RA
Sbjct: 345 AILFTLESANFQRGVRKDLDGMLAIINEFPQANFAIRGYTD---VSGSVSGNLKLSNSRA 401

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            +    L+K+G+   R+  ++GF       ++        NRR+++ V +
Sbjct: 402 NAVKDYLVKNGIDAARL-TVAGFGQESPTASNKTRAGRIQNRRVEVKVTN 450


>gi|222054197|ref|YP_002536559.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
 gi|221563486|gb|ACM19458.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
          Length = 194

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 12/181 (6%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            +K + K E   +PP++ EK       K          +     + +             
Sbjct: 23  AKKEMVKAEEATVPPVTTEKPAVTPPAKPAPS-----ETVKEQPIQEAPTTTAESTVKEQ 77

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
              +    +    +FD  S +  P     L K  + L  + +  + I GH D        
Sbjct: 78  APTVIAATELEKVLFDFDSFVLSPAARDTLSKNAQWLEKNKQVKVQIEGHCDER---GSD 134

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
             N  L   RA SA   L+  G+   ++  +  F   +       +   + NRR + ++ 
Sbjct: 135 EYNLALGEKRAKSAVNYLVTLGIPASQL-SVISFGKEKPADPGHDEAAWAQNRRAEFVIL 193

Query: 340 D 340
            
Sbjct: 194 K 194


>gi|110639098|ref|YP_679307.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281779|gb|ABG59965.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
           33406]
          Length = 673

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++    I+ T S        + +        + +  +       FD   +     +   L
Sbjct: 525 KEEFGFINKTFSVPGEKTSSQEITQNLALKKLAVGNVYVLRNIYFDFDKATLKSASNKEL 584

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             + ++L  + E+ I I GHTD+   +     N  LS  RA +    L+  G+S++R+  
Sbjct: 585 NNLLQLLKQNPEMEIEISGHTDS---KGSDEYNRVLSRKRAQAVVNWLVSKGISKNRLK- 640

Query: 312 ISGFAHHRLKIASD---PMNSANRRIDILVEDR 341
             G+   R   ++D        NRR +  +  +
Sbjct: 641 FEGYGESRPLASNDDELEGRELNRRTEFKILKK 673


>gi|333010781|gb|EGK30207.1| lateral flagellar motor protein B [Shigella flexneri K-272]
 gi|333021279|gb|EGK40532.1| lateral flagellar motor protein B [Shigella flexneri K-227]
          Length = 256

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 92/205 (44%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +    S   K          ++   E          +  A+ +KK   +L 
Sbjct: 16  AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +  +S  +     ++   +  E    G+ + I D +N  MF++ S+  +P    +L ++ 
Sbjct: 76  ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            V       I I GHTDA   +N   +NW LS DRA SA +VL ++G+ ED++ ++S  A
Sbjct: 136 PVFDSLDNKIIITGHTDAMANKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195

Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341
              L  A +P ++ NRRI+I+V  +
Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220


>gi|254454298|ref|ZP_05067735.1| OmpA family domain protein [Octadecabacter antarcticus 238]
 gi|198268704|gb|EDY92974.1| OmpA family domain protein [Octadecabacter antarcticus 238]
          Length = 219

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 10/139 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   +        T + +++++       +FD  S+         L  +   + +  
Sbjct: 85  EAELRQQMGSNAQIVNTGSQLIVTLPQD---ILFDTGSAALSGGLRSDLNALAASMNNFP 141

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              +++ GHTD+      A  N  LS  RA +   VL++SGVS +RI  I G        
Sbjct: 142 NSTVNVIGHTDSD---GTAAFNQDLSARRAQAVSSVLIQSGVSANRIRSI-GRGEDAPIA 197

Query: 323 ASDPMNSA--NRRIDILVE 339
           ++        NRR++I + 
Sbjct: 198 SNLNAEGKRQNRRVEITIT 216


>gi|167741000|ref|ZP_02413774.1| hypothetical protein Bpse14_23241 [Burkholderia pseudomallei 14]
          Length = 433

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     S            +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  L E   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DSMFRSGESRVLSEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   DRI    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432


>gi|90426398|ref|YP_534768.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90108412|gb|ABD90449.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 464

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +   P+++ +L ++ E  L   T  I I GHTD          N  LS  RA + 
Sbjct: 363 FESGRATIDPDSVGLLDRLIETALRCPTATIEIAGHTDGD---GDGAFNQTLSEKRAQAV 419

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
            + ++++G+  +R   + G+          +D   + NRRI+ +V 
Sbjct: 420 AEYMVRAGLPAERFRPV-GYGSTTPVAPNDNDEGKAQNRRIEFMVR 464


>gi|332087513|gb|EGI92641.1| ompA family protein [Shigella boydii 5216-82]
          Length = 318

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 167 EHIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 221

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 222 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 278

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 279 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 310


>gi|332977451|gb|EGK14226.1| outer membrane protein [Psychrobacter sp. 1501(2011)]
          Length = 383

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)

Query: 214 GVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
            V+ + T   + + I D+    +   FD   S+   +    + K+ E +        SI 
Sbjct: 238 NVVVDETGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIE 297

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
           GH   +     AR N RLS  RA +   +L    GV+ +R+S + G+ + R    +D   
Sbjct: 298 GHASKTGP--SARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTV-GYGYDRPIAPNDTEE 354

Query: 329 SA--NRRI 334
               NRR+
Sbjct: 355 GRAMNRRV 362


>gi|258544708|ref|ZP_05704942.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
 gi|258520045|gb|EEV88904.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
          Length = 201

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 9/109 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD   S   P     LQ +   L       + I++ GHTD+   +     N +LS  RA 
Sbjct: 83  FDFDKSNLKPAGKQALQDLAGQLNQRGANIQKITVVGHTDS---KGTDAYNQKLSERRAS 139

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           +    L ++GV   ++ +  G         +      + NRR+++ V+ 
Sbjct: 140 TVANYLAENGV-PSQLIEAYGQGESHPVATNKTAEGRAQNRRVEVNVDG 187


>gi|283955082|ref|ZP_06372585.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793449|gb|EFC32215.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
           414]
          Length = 319

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNV---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV ++RI  I G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKNRIKTI-GYGQDNPRSSNDTKEGRADNRRVD 313


>gi|167921374|ref|ZP_02508465.1| hypothetical protein BpseBC_22683 [Burkholderia pseudomallei
           BCC215]
          Length = 396

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 286 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 345

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 346 RATQVMQMLQSAGVPASRLEAL-GKGGVEPIGDNRTPQGRALNRRVEITVAR 396


>gi|167817630|ref|ZP_02449310.1| ompA family protein [Burkholderia pseudomallei 91]
          Length = 240

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDL 157
            +    +   G      +          L   + +    N + +              ++
Sbjct: 2   SSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANV 61

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K    +     +    +     +    +  + + Q LA  +++ L+      I  G+  
Sbjct: 62  QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 119

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
             +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHTD   
Sbjct: 120 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN-- 176

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                  N  LS  RA +    L+  G++  +++  +G    +    +D     + NRRI
Sbjct: 177 -SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRI 234

Query: 335 DI 336
           + 
Sbjct: 235 EF 236


>gi|299145102|ref|ZP_07038170.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
 gi|298515593|gb|EFI39474.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
          Length = 280

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 49  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            V+  +I + SG   +     +        NRR +I+
Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNKTAEGRSKNRRTEII 261


>gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341]
 gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341]
          Length = 293

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +   +     +F  +SS     + + +     +   S   +++ GH+D+         N 
Sbjct: 183 VVRQEFVGEKLFAFNSSELKASSSLDMMMDALMANESLS-LTLEGHSDSV---GSEEYNQ 238

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
            LS  RA +  +  + +G+   RI  + G        ++D     + NRR+
Sbjct: 239 ALSERRAQAVAEYFILNGIDASRI-TVMGKGSQEPVASNDSDIGRAQNRRV 288


>gi|254292013|ref|ZP_04962792.1| lipoprotein, putative [Vibrio cholerae AM-19226]
 gi|150422090|gb|EDN14058.1| lipoprotein, putative [Vibrio cholerae AM-19226]
          Length = 223

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  +S          L+ + 
Sbjct: 84  DQQEAELRKALMDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+E R     G 
Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDSTNQVLSEKRAESVRSFLLSQGVAEGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++I + 
Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220


>gi|90019934|ref|YP_525761.1| hypothetical protein Sde_0285 [Saccharophagus degradans 2-40]
 gi|89949534|gb|ABD79549.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 364

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   PE+   L ++  +L       I I GHTD       ++ N +LS  RA S 
Sbjct: 199 FDSGKSALKPESDSELAELATILNEHPALKIKIVGHTDNV---GDSKANLKLSAARAKSV 255

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              L+K+  V+   +S   G    +    +      + NRR++I+
Sbjct: 256 LNALVKNFNVNAANLSA-EGQGETQPVDTNSTDMGRAKNRRVEII 299


>gi|159186121|ref|NP_356322.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
 gi|159141255|gb|AAK89107.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
          Length = 501

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 8/184 (4%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
             T+    +        P   +   +    K        ++   ++ L  +   K V   
Sbjct: 293 PPTETPSVLISNPPPHPPAQVEIPRVVEPPKTVAPRQPSRLEKLMAFLQPEVDKKLVTLA 352

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
                + + I    N+ +F   S+   P+   ++Q+IG  LA       + G+TD  P +
Sbjct: 353 DVNGRLRVRIN---NSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVIGYTDTVPIK 409

Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            +    NW LS  RA +   +L +    +  ++   G A       +        NRR +
Sbjct: 410 TVEFPSNWHLSEARAKAVGDILSQFTGPDAILT--EGRADSDPIADNKTEEGRQINRRTE 467

Query: 336 ILVE 339
           I+V 
Sbjct: 468 IMVL 471


>gi|33595602|ref|NP_883245.1| hypothetical protein BPP0920 [Bordetella parapertussis 12822]
 gi|33600116|ref|NP_887676.1| hypothetical protein BB1130 [Bordetella bronchiseptica RB50]
 gi|33565680|emb|CAE40328.1| probable outer membrane protein [Bordetella parapertussis]
 gi|33567714|emb|CAE31628.1| probable outer membrane protein [Bordetella bronchiseptica RB50]
          Length = 215

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +++++      + +   L+  +A            R  ++   I      +
Sbjct: 43  ELSTRLEAEVEQRQAETQRREALEQALAAPLAAG----------RVTLVDGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   +L      +   L    E++ + G TD            DNW LS 
Sbjct: 93  FALNSDQLQPEGREILASLVAPLSAYLRAHDEILMVSGFTDDQQVHQGNRRYADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +G+    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIDAGIPAASVFAAA-FGAEQPVASNADETGRAQNRRVEI 200


>gi|293605866|ref|ZP_06688236.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
 gi|292815653|gb|EFF74764.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
          Length = 216

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 20/170 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      + +   L+G +A            R  ++   I    + +
Sbjct: 43  QLSTRLEEEVKQRQEETQRRETLEQALAGPLAAG----------RVTLINGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   +L+ + E     L    E++ + G+TD    R       DNW LS 
Sbjct: 93  FALNSDQLQPEGREILKTLIEPLAAYLKTHDEILMVSGYTDDQQVREGNRRFADNWDLSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I 
Sbjct: 153 QRALTVTRALIDEGVPSATVFAAA-FGSEQPVASNADEEGRAKNRRVEIT 201


>gi|170723577|ref|YP_001751265.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169761580|gb|ACA74896.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 240

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   S+   P     L  +    
Sbjct: 88  DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLATSF 144

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I + G TD++      + N  LS  RA +    L   GV   R+  + G    
Sbjct: 145 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSAYLTSQGVDASRV-SVRGMGPD 200

Query: 319 RLKIASDPM--NSANRRIDILVE 339
           +   ++      + NRR+++ ++
Sbjct: 201 QPIASNADANGRAQNRRVEVNLK 223


>gi|114562313|ref|YP_749826.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114333606|gb|ABI70988.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 225

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    ++       VL  +  
Sbjct: 84  YMDVQEAELRKQLKSTGVSVTRNGDNIVLNM---PNEVTFAVDQTVLSSRAKSVLNSVVL 140

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +   ++ G+TD+         N RLS  RA    Q +    VS  R+S  +G  
Sbjct: 141 VAKEYDDTRLNVIGYTDS---SGSDSYNLRLSQVRASEVAQYMTSQKVSGSRVSS-TGMG 196

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                 ++      S NRR++I++ 
Sbjct: 197 ESSPIASNSTEQGRSQNRRVEIVLT 221


>gi|60650175|ref|YP_209728.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|255010962|ref|ZP_05283088.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313148766|ref|ZP_07810959.1| lipoprotein [Bacteroides fragilis 3_1_12]
 gi|317477470|ref|ZP_07936697.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|60495255|emb|CAH05749.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|313137533|gb|EFR54893.1| lipoprotein [Bacteroides fragilis 3_1_12]
 gi|316906390|gb|EFV28117.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 213

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            ++   +  +++   +     +  L    ++K +  K + R   L      ++S     N
Sbjct: 34  DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             +                  ++  +F   S     E   +L  +  ++       I I 
Sbjct: 94  GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKII 141

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           GHTD        + N  LS +RA +    L  +G+  + I++  G  +      +     
Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++I + + +
Sbjct: 198 RAKNRRVEIFITNDE 212


>gi|237707828|ref|ZP_04538309.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229458156|gb|EEO63877.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 213

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            ++   +  +++   +     +  L    ++K +  K + R   L      ++S     N
Sbjct: 34  DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             +                  ++  +F   S     E   +L  +  ++       I I 
Sbjct: 94  GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKII 141

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327
           GHTD        + N  LS +RA +    L  +G+  + I++  G  +      +     
Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197

Query: 328 NSANRRIDILVEDRQ 342
            + NRR++I + + +
Sbjct: 198 RAKNRRVEIFITNDE 212


>gi|91215766|ref|ZP_01252736.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
 gi|91186232|gb|EAS72605.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
          Length = 231

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G        GI ++  D+ +   F  + S    ++ + L K+  +     
Sbjct: 84  QAKEIEEEIPGAEVTRVGEGINVTF-DENSGVYFTTNKSNIEGKSEISLLKLIGIFQKYP 142

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I + GHTD++        N  LS  RA S    L  +G+S  RI   + +   + K 
Sbjct: 143 KTNIIVEGHTDST---GSDSYNMDLSKRRAQSVTDYLSNNGISSSRIKT-NWYGEEQPKF 198

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      S NRR+++ +   +
Sbjct: 199 DNTSPEERSKNRRVELAIVANE 220


>gi|331684442|ref|ZP_08385034.1| putative OmpA-family membrane protein [Escherichia coli H299]
 gi|331078057|gb|EGI49263.1| putative OmpA-family membrane protein [Escherichia coli H299]
          Length = 550

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282
           +    +   +  +FD   +     +  VL      +      +  + G+TDA+      +
Sbjct: 425 LQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            N +LSL RA +    ++++         + G    +    +D     + NRR++I +  
Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541

Query: 341 R 341
           R
Sbjct: 542 R 542


>gi|167826566|ref|ZP_02458037.1| OmpA family membrane protein [Burkholderia pseudomallei 9]
          Length = 531

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519


>gi|167722027|ref|ZP_02405263.1| OmpA family membrane protein [Burkholderia pseudomallei DM98]
          Length = 531

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519


>gi|49187402|ref|YP_030654.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
           Sterne]
 gi|227817292|ref|YP_002817301.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
 gi|254736614|ref|ZP_05194320.1| chemotaxis protein MotB [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741652|ref|ZP_05199339.1| chemotaxis protein MotB [Bacillus anthracis str. Kruger B]
 gi|49181329|gb|AAT56705.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
           Sterne]
 gi|227002900|gb|ACP12643.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
          Length = 156

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 12/156 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              L+ L KKI   ++      +      + T  G++++I++     +FD   +    E+
Sbjct: 1   MDELKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLES 54

Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VS 305
           + + +++  +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  + 
Sbjct: 55  LGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQ 114

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            ++ S I G+  +R    +D     + NRR+++ + 
Sbjct: 115 PEKFSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 149


>gi|209809406|ref|YP_002264944.1| putative outer membrane protein, OmpA family [Aliivibrio
           salmonicida LFI1238]
 gi|208010968|emb|CAQ81375.1| putative outer membrane protein, OmpA family [Aliivibrio
           salmonicida LFI1238]
          Length = 185

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 13/167 (7%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              S+++  A+K    ++         L+ ++ D+I            +L          
Sbjct: 19  QSTSEDETTAIKSTPTIESFITYHHDELNAIITDDIGSVAQVNDEIIVLL------NGDT 72

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD  S +   E+   L ++ ++L       + I GHTD+       + N  LS  RA S
Sbjct: 73  SFDSGSIVIKSESKDALTQLAQLLNNKPRSEVFIAGHTDS---SGSKQFNTSLSNKRANS 129

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
              +L + GV  +RI+   GF       +  +      NRRI+I + 
Sbjct: 130 VLALLEQKGVDANRINTY-GFGEAEPIASNMNANGRKKNRRIEIRIT 175


>gi|71281842|ref|YP_271675.1| ompA family protein [Colwellia psychrerythraea 34H]
 gi|71147582|gb|AAZ28055.1| ompA family protein [Colwellia psychrerythraea 34H]
          Length = 222

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + S  + L       GV  +     I + +        F  SSS        VL  +  
Sbjct: 80  YMDSQEAKLRKQLRDSGVSIQREGDKINLIM---PGNITFATSSSNINTNFTGVLNSVAL 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  + + GHTD+      A+ N +LS +RA S    L    +  +R+ ++ GF 
Sbjct: 137 VLEEYNKTLVVVSGHTDS---SGSAQYNQKLSEERAGSVANYLRGQKILSERL-EVVGFG 192

Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339
             +    +        NRR++I + 
Sbjct: 193 EAQPVADNQSAGGRELNRRVEITLL 217


>gi|325473514|gb|EGC76707.1| OmpA family protein [Treponema denticola F0402]
          Length = 422

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A  +   ++ +       +   V D  ++    E T  G+ ISI        F  +S+I 
Sbjct: 270 ARAKVIEVKKIDTAAEEEIKKSVEDLNLENTTIEKTDEGLTISI----ENIQFLPNSAIL 325

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
                  L+KIGE+L    +    I GHT          +  +LS +RA +    L+  G
Sbjct: 326 RESEKEKLKKIGEILLKFPDREFLISGHT---ALAGTEEERQKLSEERAAAVANYLIDLG 382

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           V +       GF   R   A++     + NRR++I + D+
Sbjct: 383 VQKREHVYTRGFGARRPVAANNSPENMAKNRRVEITILDK 422


>gi|325300740|ref|YP_004260656.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324320293|gb|ADY38183.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 209

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-----------RNTPMFDKSSSIP 244
           A+ I       +   +++         G++++ ID+           +N  +F   S   
Sbjct: 53  AELIKKEQEKAINKKLLERENKLKNIPGLVVTTIDETNGKKIFKATMQNEILFKFDSHEL 112

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
                 +L ++  ++       I + GHTD    +     N  LS +RA +    L  +G
Sbjct: 113 NKNAKSILDEMIGIINEIPNTKIKVIGHTDNIGEKG---YNILLSQNRAAAVGNYLRNAG 169

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +    I++  G        ++      + NRR++I + + 
Sbjct: 170 IETKNITE-EGKGFDEPVSSNKTEAGRAKNRRVEIFLSND 208


>gi|311106822|ref|YP_003979675.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
 gi|310761511|gb|ADP16960.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
          Length = 216

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS +    +K+++      + +   L+G +A            R  ++   I   
Sbjct: 39  AVQLQLSTQLEEEVKQRQVETQRRETLEQALAGPLAAG----------RVTLIDGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   VL+ + E     L    E++ + G+TD    R       DNW
Sbjct: 89  GSVLFALNSDQLQPEGREVLKSLIEPLSAYLKSHNEILMVSGYTDDQQVREGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+  GV    +   + F   +   A+  +   + NRR++I
Sbjct: 149 DLSAQRALTVTRALIDEGVPSSAVFAAA-FGSEQPVAANTDEEGRAKNRRVEI 200


>gi|260890076|ref|ZP_05901339.1| hypothetical protein GCWU000323_01238 [Leptotrichia hofstadii
           F0254]
 gi|260860099|gb|EEX74599.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 155

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 FD   S+  P+   +L+ + + +  +   + I GHTD+   +     N  L + 
Sbjct: 46  DSGRLNFDFDKSVVKPQYFELLRNVKDYVEQNNLNLRIIGHTDS---KGTDAYNMALGMR 102

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA +    L++ G+   RI  +           +D       NRRI  
Sbjct: 103 RANAVKAKLLEFGLDPARIIGVESMGESDPIAPNDTEQGRFENRRIQF 150


>gi|119776228|ref|YP_928968.1| OmpA family protein [Shewanella amazonensis SB2B]
 gi|119768728|gb|ABM01299.1| OmpA family protein [Shewanella amazonensis SB2B]
          Length = 222

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++ +      F    +   P  + VL  +  
Sbjct: 82  YMDVQETKLRQQLQASGVSVTRNGDNIILNMPNDVT---FAVDKTDLSPRAMQVLDSVAL 138

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      L+  GV+  R+S   G  
Sbjct: 139 VAKEYSKTRLNVLGYTDS---SGADSYNLRLSQVRASEVGNYLLSKGVAAARVST-QGMG 194

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                 ++      + NRR++I++ 
Sbjct: 195 EASPIASNATAEGRAQNRRVEIILT 219


>gi|167921266|ref|ZP_02508357.1| OmpA family protein [Burkholderia pseudomallei BCC215]
          Length = 524

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237
            + RL+     I  TL   V      G+         L +++D   T           +F
Sbjct: 349 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 408

Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
               +   P       +     +LA+  + + I GH D+         N++LS  RA + 
Sbjct: 409 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 465

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
               +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 466 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 512


>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
 gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
          Length = 342

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDA 274
           + +       +    + N+ +F  +SS+    +      +   L       ++  GHTD+
Sbjct: 213 VVQIVEKRQFVYSEQKGNSLLFAHNSSVLNNTSQF--ADVVSFLKQHPTASAVITGHTDS 270

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           +      + N  LS  RA S    L+  GV   +++ + G         +      + NR
Sbjct: 271 T---GSDKYNQWLSERRAISVANYLVSQGVQSAQLTSV-GKGETASVADNTTENGRAMNR 326

Query: 333 RIDILV 338
           R++I +
Sbjct: 327 RVEITI 332


>gi|296328018|ref|ZP_06870553.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154974|gb|EFG95756.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 182

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
           +GV        +++S+       +FD             L  + + L  + +  I I G+
Sbjct: 58  EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 114

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD   F      N  LS+ RA +    L+  G     I  I G+        +      S
Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170

Query: 330 ANRRIDILVED 340
            NRR++ ++  
Sbjct: 171 RNRRVEFIISR 181


>gi|218259786|ref|ZP_03475375.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224914|gb|EEC97564.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
           DSM 18315]
          Length = 227

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++    K++ +TL           V        + ++     +  +F  +SS     + 
Sbjct: 72  KKMDKQKKELEATLPEETT------VETINNGEALKVTF---DSGILFATNSSTVSAASK 122

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307
             L+ +   L  + +  I I GHTD +        N  LS  RA S +  LM+  GVS  
Sbjct: 123 SALRDLAASLNANPDTDIKIIGHTDNT---GKVDYNQTLSEKRAKSVFDYLMEDQGVSSK 179

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           R+    G   H     +      + NRR++IL+ 
Sbjct: 180 RM-TYEGKGVHEPVADNSTPEGRALNRRVEILIL 212


>gi|153215326|ref|ZP_01949939.1| lipoprotein, putative [Vibrio cholerae 1587]
 gi|153826671|ref|ZP_01979338.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|153829618|ref|ZP_01982285.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|183179599|ref|ZP_02957810.1| lipoprotein, putative [Vibrio cholerae MZO-3]
 gi|229515575|ref|ZP_04405034.1| outer membrane protein [Vibrio cholerae TMA 21]
 gi|229520377|ref|ZP_04409802.1| outer membrane protein [Vibrio cholerae TM 11079-80]
 gi|229525804|ref|ZP_04415209.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
 gi|229529718|ref|ZP_04419108.1| outer membrane protein [Vibrio cholerae 12129(1)]
 gi|254226715|ref|ZP_04920292.1| lipoprotein, putative [Vibrio cholerae V51]
 gi|262191649|ref|ZP_06049827.1| outer membrane protein [Vibrio cholerae CT 5369-93]
 gi|297578794|ref|ZP_06940722.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|124114769|gb|EAY33589.1| lipoprotein, putative [Vibrio cholerae 1587]
 gi|125620776|gb|EAZ49133.1| lipoprotein, putative [Vibrio cholerae V51]
 gi|148874894|gb|EDL73029.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|149739533|gb|EDM53761.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|183013010|gb|EDT88310.1| lipoprotein, putative [Vibrio cholerae MZO-3]
 gi|229333492|gb|EEN98978.1| outer membrane protein [Vibrio cholerae 12129(1)]
 gi|229339385|gb|EEO04402.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
 gi|229342475|gb|EEO07468.1| outer membrane protein [Vibrio cholerae TM 11079-80]
 gi|229347344|gb|EEO12304.1| outer membrane protein [Vibrio cholerae TMA 21]
 gi|262032491|gb|EEY51051.1| outer membrane protein [Vibrio cholerae CT 5369-93]
 gi|297536388|gb|EFH75221.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|327483893|gb|AEA78300.1| Outer membrane protein [Vibrio cholerae LMA3894-4]
          Length = 223

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  +S          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++I + 
Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220


>gi|323159967|gb|EFZ45936.1| ompA family protein [Escherichia coli E128010]
          Length = 250

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 99  EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 153

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 154 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 210

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR++I +  R
Sbjct: 211 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 242


>gi|260889292|ref|ZP_05900555.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
 gi|260860703|gb|EEX75203.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
          Length = 269

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 8/249 (3%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
              S+      + + I + +V      T  +       N    ++ +   +    +LT+D
Sbjct: 18  PTVSEKMTTSDMRKDIIRANVADIQQDTANEVPTLDTPNPQKPVATADNPDLITVALTQD 77

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK-KRLQDLAKKISSTLSGLVAD 209
               + +   +      + +    L     + +   +           + ++     + +
Sbjct: 78  GTGTRIVNNRSSGTYQTSGKNAVNLSQQKTQAVQNNQPVTAASAQSEAEQTTATVSEIQE 137

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
             +            +I++        F K+S+    E   VL+ I + +  +  ++SI 
Sbjct: 138 KPINNPQKVQISKSEIITLRSNDLN--FQKNSTDLKKEAYPVLRDIKDYIEKNDFLVSII 195

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+TD S   +    N RLSL RA      L++ G+S+DR+  + G         +D    
Sbjct: 196 GYTDKSGVSS---YNKRLSLRRAEKVSLKLIELGLSKDRVVDLIGRGESNPIKTNDTEEG 252

Query: 330 A--NRRIDI 336
              NRR++ 
Sbjct: 253 REGNRRVEF 261


>gi|119385179|ref|YP_916235.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119374946|gb|ABL70539.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 463

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDAS 275
              +G+++ ++   +  +F  + +   P    +++ IG  +   AH    +++ GHTD  
Sbjct: 334 RETSGLVVLVVRASDPEVFRSAKASLNPAYQPLVEAIGRTVVANAHRIGAVAVSGHTDNV 393

Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           P    N    N  LS  RA +  Q L  +GV  + +    G A  +    +      + N
Sbjct: 394 PVQRSNPFASNQGLSEARAETVAQALAAAGVPAE-LISAEGRADSQPVGDNATRDGRAQN 452

Query: 332 RRIDILVEDRQ 342
           RRI+I +E RQ
Sbjct: 453 RRIEIRIEKRQ 463


>gi|319786952|ref|YP_004146427.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465464|gb|ADV27196.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 216

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 10/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++   RL +  ++  +      A      V     R  ++   I  R   +F  +S   
Sbjct: 41  QLQLSARLDEEVRQRQAEAKQRHALEQALAVPLADGRVTLVDGRIGIRGNVLFALNSDQL 100

Query: 245 LPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSLDRAYSAYQ 297
            PE   VL+ +   LA       +V+ + G TD  P         DNW LS  RA +  +
Sbjct: 101 QPEGRQVLRSLAAPLARYLEAGEQVLMVSGFTDDRPVHEGNRRFADNWELSAQRALTVTR 160

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
            L++ GV  D +   + F   +    +D     + NRR++I
Sbjct: 161 ALIEEGVPADSVFAAA-FGAQQPVSPNDDEEGRARNRRVEI 200


>gi|163742880|ref|ZP_02150264.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
 gi|161383844|gb|EDQ08229.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
          Length = 655

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 17/308 (5%)

Query: 50  VMWIINATDDDTKKAIEQY-FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           ++  ++  +     A ++          +T  +    E       ++ +  L      + 
Sbjct: 349 LLEALSKLEQANAAAADREVLQQRLLAALTEGEERAVEAAELASLAEQRAALLAQARASL 408

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           ++         ++      +                +   RD+ +   +        +  
Sbjct: 409 STEQAVSEEAQRQTALLNQQVAALREQLGGLQTLLDDYKARDAAQSVQMQNLGQDLNAAL 468

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                        +    KR +   +     +  L    ++   +       + G+ I  
Sbjct: 469 ARAAAEERRRRLLEESERKRLEAEAEQLSSKAQDLEQYRSEFFGRLRDVLGNQEGVRIEG 528

Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP-- 276
                 +  +F   S+   P     + K+  +L             +I + GHTD +P  
Sbjct: 529 DRFVFASEVLFSPGSADLSPAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLG 588

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                 DNW LS  RA S  + ++++ G+  +R+S  +GF  ++    +      + NRR
Sbjct: 589 IHPKFADNWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAPTAVARAQNRR 647

Query: 334 IDILVEDR 341
           I++   +R
Sbjct: 648 IELKFTER 655


>gi|153877096|ref|ZP_02004079.1| OmpA domain protein [Beggiatoa sp. PS]
 gi|152066440|gb|EDN65921.1| OmpA domain protein [Beggiatoa sp. PS]
          Length = 155

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 12/117 (10%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD + S+   E    +Q++ + +A        I+GHTD+         N  LS  RA 
Sbjct: 42  VLFDTNKSMVKSEYYAEIQQVSDFMAKYPSTSTEIQGHTDS---SGSDDYNLNLSQQRAD 98

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI----DILVEDRQG 343
           +  +VL+    +S  R++ + G+   +    +        NRR+    + +V+  +G
Sbjct: 99  AVLEVLISQFNISPSRLAAV-GYGESQPIADNSTREGRQQNRRVVARIETVVKQIEG 154


>gi|90416365|ref|ZP_01224297.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
 gi|90332090|gb|EAS47304.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
          Length = 324

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +    L      L  I   +    ++  +  GHTD+       + N  LS  RA + 
Sbjct: 215 FEFNKDTVLAVYGDQLDAIAAAMKAQDDIDLVLEGHTDSR---GADQYNMSLSDRRAKAV 271

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
              L++  G+   RIS + G+   +    ++     + NRR+
Sbjct: 272 KAKLVEDYGIPAARISAV-GYGETQPIATNETDEGRARNRRV 312


>gi|148262285|ref|YP_001228991.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146395785|gb|ABQ24418.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 194

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 46/174 (26%), Gaps = 7/174 (4%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            K+E               K               +                    +   
Sbjct: 23  AKKEMVKGEEGVVPSAATEKPAVTPPAKPSMTEEVVKEQPIKEATTIAEASIKEQPVTAV 82

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286
              +     FD  S +    +  +L    + L       + I GH D          N  
Sbjct: 83  AATELGKVYFDFDSFVLTQTSRDILSNNAKWLLKTGRAKVQIEGHCDER---GSDEYNLA 139

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
           L   RA SA   L+  GV  D++  +  +   +      ++   + NRR + ++
Sbjct: 140 LGEKRAKSAMNYLVTLGVPADQL-SVISYGKEKPADPGHNEAAWAKNRRAEFVI 192


>gi|254182815|ref|ZP_04889408.1| OmpA domain protein [Burkholderia pseudomallei 1655]
 gi|184213349|gb|EDU10392.1| OmpA domain protein [Burkholderia pseudomallei 1655]
          Length = 421

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA    Q+L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAAPIGDNRTPQGRALNRRVEITVAR 421


>gi|332703401|ref|ZP_08423489.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332553550|gb|EGJ50594.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 249

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 9/173 (5%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              +        +++ +++  K  +          +   V     +  I + +       
Sbjct: 80  DEQAVLIDQVKLQRQIMENQRKLFTEVQFYQNTKGLKGVVGAHFDKGIITLRVPSD---V 136

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRA 292
           MF         + + VL+ + ++L  H+ + I+IRG TD          +DNW +S  R+
Sbjct: 137 MFAPGQVELTTQGVAVLRDLKDLLIKHADQRINIRGFTDDVRPSGNSRFKDNWEISAMRS 196

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            +  +VLM  G+   R++  +G A       ++     + NRRI+I +E R G
Sbjct: 197 VNVLRVLMSLGMEPTRLTA-TGLADLEPLFPNNSTENRARNRRIEITLEKRVG 248


>gi|126725798|ref|ZP_01741640.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
            HTCC2150]
 gi|126705002|gb|EBA04093.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
            HTCC2150]
          Length = 1017

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 15/206 (7%)

Query: 150  DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVA 208
            D     D  + T +     +     L   S++K +A      ++ L ++     S     
Sbjct: 813  DIANETDAAQGTQITVLTEELNTALLRTASEQKKIAKLEAAEVKRLEEEAKKLESFKSDF 872

Query: 209  DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS------ 262
               ++ VL       I+       +  +F    +   P     + K+ ++L         
Sbjct: 873  FGQLRQVLAGREGVKIVGDRFVFSSEVLFPPGGAELSPAGEAEVAKVADILQDVIDKIPA 932

Query: 263  --TEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                VI + GHTD   F       +NW LS  RA S  Q ++ S G+  DR+S  +GF  
Sbjct: 933  NIDWVIRVDGHTDNVAFNGLGKYSNNWELSQGRALSVVQFMVSSFGLPPDRLSA-NGFGE 991

Query: 318  HRLKIASDP--MNSANRRIDILVEDR 341
            ++    +D     + NRRI++ + ++
Sbjct: 992  YQPINLADTPEARAQNRRIELKLTEK 1017


>gi|114800290|ref|YP_762003.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114740464|gb|ABI78589.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 211

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L       G+  E     I +++    +   F + S+   P     L  +  
Sbjct: 70  YMDRQEEKLRQQTAGTGIEVERQGDQIALTM---PSGISFQQGSAQIQPAFYQTLNDVAA 126

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L       + IRGH  +         N RLS  RA +    L   GV   R+S + G  
Sbjct: 127 TLNEYPSTAVDIRGHASSE---GARDFNQRLSQQRADAVRSYLTNQGVQGVRMSAV-GMG 182

Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339
                  +        NRR++I++ 
Sbjct: 183 IDYPVADNSTEAGRSQNRRVEIILT 207


>gi|158522220|ref|YP_001530090.1| peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
           Hxd3]
 gi|158511046|gb|ABW68013.1| Peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
           Hxd3]
          Length = 181

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   P    +L+     L  +++  + + GH D          N  L   RA +A
Sbjct: 80  FDFDKSTLTPAAREILRTKATWLRDNSDAAVVVEGHCDER---GTTEYNLALGDRRAKAA 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
              L+  G+S  R+S IS +   R      ++   + NRR   ++ 
Sbjct: 137 KDFLVDMGISASRLSTIS-YGEERPLDPRSNETAWAKNRRAQFVLR 181


>gi|326800681|ref|YP_004318500.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326551445|gb|ADZ79830.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 650

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   F  +    LP +   L ++ ++L H+  +   I GHTD +     A+ N  LS  R
Sbjct: 539 NNIFFPTNGYELLPTSESDLMELFQLLQHNKHIRIEITGHTDNT---GSAQANQVLSEKR 595

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A + Y  L+  G+ + R+    G+  +     +        NRR +  +
Sbjct: 596 ALAVYAYLLSKGIDKTRL-AYKGYGQNNPIADNTTEKGKQQNRRTEFKI 643


>gi|312130324|ref|YP_003997664.1| v-type h(+)-translocating pyrophosphatase [Leadbetterella
           byssophila DSM 17132]
 gi|311906870|gb|ADQ17311.1| V-type H(+)-translocating pyrophosphatase [Leadbetterella
           byssophila DSM 17132]
          Length = 878

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + S+     ++  ++ I  +L    +  I + G+TD +        N +LS +RA + 
Sbjct: 775 FKRGSNDIDESSMEEVKNIAAILKEYPQVKIKVGGYTDNT---GTPEGNLKLSEERATNV 831

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L+  G+SEDR+S   GF        +        NRRI I V ++
Sbjct: 832 KKALIALGISEDRLSS-EGFGQEHPVADNTTEEGRQKNRRIAISVREK 878


>gi|188575566|ref|YP_001912495.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520018|gb|ACD57963.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 268

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
              +  G    +    R+ NN+     S +        +  S        +  +   + +
Sbjct: 41  RPVIVEGVVPDQATKARILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 100

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                L    +   ++ +     Q        +L+   +  +   +    +  G+L   +
Sbjct: 101 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 160

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             R    F   SS   P  + +L ++ E ++   +    I GHTD          N  LS
Sbjct: 161 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 216

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             RA +    +++ G+   R++ + G    +    +      + NRRI   ++
Sbjct: 217 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 268


>gi|126727783|ref|ZP_01743613.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126702910|gb|EBA02013.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 630

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 87/320 (27%), Gaps = 32/320 (10%)

Query: 35  IVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS 94
           I Y+D         + +  ++ T +     +          + +    +          S
Sbjct: 300 ITYSDAD-------VSLVALDTTPEADFDRVVGELKAALPEVFSLDAVLPKVVVLDGTGS 352

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
              +         +  V L+    ++++Q                    +          
Sbjct: 353 DPALIEFFATKSPEGQVQLRGRLADERQQSTVTSFAQARFGADAVYSATRLDTDLPDGWA 412

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
             +    +    +        P       + +K +  ++ +   ++  L   + +     
Sbjct: 413 LRVLAGVEAMSMLTHGVLIVQPEF-----VELKGESHVETVNDDVARLLGEKLGEGQNYR 467

Query: 215 VLFETTRTGI-------------LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
           +        +              IS         F   ++     ++  + K+ E    
Sbjct: 468 LNITYVEPPLPEDAPKSPEVCITNISTALASRKIAFAPGAADIEATSLSTIDKLTEAFQG 527

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +EV + I GHTD+         N  LS  RA +    L+  GV    ++   G+     
Sbjct: 528 CSEVAMEIGGHTDSQ---GRETMNLNLSQQRADAVLNGLLARGVLTSNLTA-KGYGETVP 583

Query: 321 KIASDPMNSA--NRRIDILV 338
              +        NRRI+ ++
Sbjct: 584 IADNGTEEGREENRRIEFVL 603


>gi|325121713|gb|ADY81236.1| OmpA/MotB domain protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 255

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTDAGQKILDEMAIALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 211 KNYLISKSIPADHLST-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255


>gi|229121280|ref|ZP_04250511.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
 gi|228662125|gb|EEL17734.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
          Length = 224

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 9/215 (4%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           + ++        F              +    +    L K  +      + +   +    
Sbjct: 6   RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65

Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +       +K + +    ++   L   V +N +  V      TG+ + I+D     +FD
Sbjct: 66  PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297
              +   PE   ++ ++          I + GHTD+ P  N     NW LS  RA +   
Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331
            L++   V + R++ + G+A  +  + +D     N
Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDS--PQN 214


>gi|84624974|ref|YP_452346.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84368914|dbj|BAE70072.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 266

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
              +  G    +    R+ NN+     S +        +  S        +  +   + +
Sbjct: 39  RPVIVEGVVPDQATKARILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 98

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                L    +   ++ +     Q        +L+   +  +   +    +  G+L   +
Sbjct: 99  VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 158

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             R    F   SS   P  + +L ++ E ++   +    I GHTD          N  LS
Sbjct: 159 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 214

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             RA +    +++ G+   R++ + G    +    +      + NRRI   ++
Sbjct: 215 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 266


>gi|255530915|ref|YP_003091287.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343899|gb|ACU03225.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 175

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
             +   F+ +S +    +  VL +I   +     V  +  GH+        A  N  LS+
Sbjct: 67  NFSNVQFEFNSGVLKTASFEVLDRIAAEMKKDPAVKFVLNGHSS---IEGSAAHNMSLSV 123

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           DRA S    L+ +GVS   +  I G+   +   ++      + NRR++ 
Sbjct: 124 DRANSVKLYLVNAGVSAANL-SIKGYGATQPVASNSTEEGKAQNRRVEF 171


>gi|226946149|ref|YP_002801222.1| OmpA family protein [Azotobacter vinelandii DJ]
 gi|226721076|gb|ACO80247.1| OmpA family protein [Azotobacter vinelandii DJ]
          Length = 222

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   S+         L  +    
Sbjct: 76  DKQEAQLRQQMAGTGVEVQRQGNDIKLIM---PGNITFATGSAEIASNFYTPLNDLANSF 132

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I + GHTD++      + N  LS  RA S    L+  GV+  R++   G    
Sbjct: 133 KQYDQNSIEVIGHTDST---GSYQTNMSLSQRRAQSVANYLVAQGVNGARVTT-RGAGPD 188

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
               ++      S NRR++I +    G
Sbjct: 189 SPVASNATESGRSQNRRVEINLRPLPG 215


>gi|254419256|ref|ZP_05032980.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
 gi|196185433|gb|EDX80409.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
          Length = 224

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      + A+    GV        +++ +        F  + S   P  + VL  + 
Sbjct: 82  QYMDRQQRAMEAELSGSGVGVARQGDNLVLRMPSDVT---FATNQSSIDPRFLPVLDDVA 138

Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL       I + GHTD++        N  LS  RA S    L++ GV  +R+  ++G 
Sbjct: 139 RVLQEYDRSTIDVIGHTDST---GGDAINQPLSERRAASVASELVRRGVIAERLY-VAGN 194

Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339
           +      ++      + NRR++IL+ 
Sbjct: 195 SSRNPVASNATPEGKAQNRRVEILIR 220


>gi|150377808|ref|YP_001314403.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150032355|gb|ABR64470.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
          Length = 420

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
             +   FD   S   P    +L  I   L +  +    I GHTDA      A  N RLSL
Sbjct: 77  DVHGLSFDTGQSTLQPSAKPLLDDIATALKNFPDWGLRIVGHTDA---SGSAESNERLSL 133

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +RA +    L++ G+   ++    G   +R   +++     + NRR++++
Sbjct: 134 ERADTIKAALVERGIDAGKLLAA-GAGQNRPIASNETDEGRALNRRVELM 182


>gi|218460723|ref|ZP_03500814.1| flagellar motor protein MotB [Rhizobium etli Kim 5]
          Length = 72

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 48/72 (66%)

Query: 1  MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
          M+   + +   ++ II+K+    D    + G+WKI YADFMT +MAFFLVMW++NA +++
Sbjct: 1  MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60

Query: 61 TKKAIEQYFNPF 72
          TK A+  YFNP 
Sbjct: 61 TKAAVATYFNPI 72


>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
 gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
          Length = 338

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S+     T      +  ++    +  ++I G+TD+         N R+S +RA S 
Sbjct: 223 FEFNSTKLNENTKSDYDPLIALMQDHPDSTVTITGYTDS---SGPEEVNQRISEERAESI 279

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              L   G+   R+  +SG         +      + NRR++I V
Sbjct: 280 AAYLESQGIDRSRM-TVSGMGEANPIADNSTKEGRAQNRRVEITV 323


>gi|153841945|ref|ZP_01993455.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
 gi|149745429|gb|EDM56680.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
          Length = 170

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L    +  GV  +      L  ++   N   F  SS          L+ +  +L
Sbjct: 31  DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 88

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +   +  G+TD++        N  LS  RA S  Q L+   V+  R     G+   
Sbjct: 89  VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 144

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I + 
Sbjct: 145 NPICSNQTSEGRACNRRVEIQIL 167


>gi|255019372|ref|ZP_05291483.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
 gi|254971192|gb|EET28643.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
          Length = 226

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   P+ +  + ++ + +  + +  I + GHTD          N +LS  RA + 
Sbjct: 39  FDYNKATLRPDALKTVGELAQTMRQNPQLFIGLDGHTDNI---GGTDFNQKLSEARANAV 95

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              L+  G+   RI    G    +    +      + NRR++++
Sbjct: 96  KAALVAQGIDASRI-ATRGLGATQPVADNATDAGRAKNRRVEVV 138


>gi|122879266|ref|YP_202154.6| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 270

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
              +  G    +    R+ NN+     S +        +  S        +  +   + +
Sbjct: 43  RPVIVEGVVPDQATKVRILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 102

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                L    +   ++ +     Q        +L+   +  +   +    +  G+L   +
Sbjct: 103 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 162

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             R    F   SS   P  + +L ++ E ++   +    I GHTD          N  LS
Sbjct: 163 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 218

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             RA +    +++ G+   R++ + G    +    +      + NRRI   ++
Sbjct: 219 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 270


>gi|238783060|ref|ZP_04627087.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
 gi|238716061|gb|EEQ08046.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
          Length = 219

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMNGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G TD+         N  LS  RA S    L+  GV+ +R+ + SG  
Sbjct: 137 VLKEYDKTAVNVTGFTDS---SGARAHNMTLSQQRADSVGSALIMQGVAANRV-RTSGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|331006223|ref|ZP_08329545.1| Outer membrane protein [gamma proteobacterium IMCC1989]
 gi|330419980|gb|EGG94324.1| Outer membrane protein [gamma proteobacterium IMCC1989]
          Length = 338

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S       +  ++ +   +       ++ G HTD++     A  N  LS  R    
Sbjct: 224 FASNSDKVPSAYLPEIENLATFMQQYPTATAVIGGHTDST---GSAEYNQSLSQRRVNEV 280

Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID--ILVEDRQ 342
            ++L    GV   R+S I G+   +    +D     + NRR++  I VE  +
Sbjct: 281 ARLLSANYGVDASRVSAI-GYGEAQPIAGNDTAVDRAKNRRVEASITVEVEE 331


>gi|332290734|ref|YP_004429343.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168820|gb|AEE18075.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 293

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 76/244 (31%), Gaps = 11/244 (4%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              +      + S   K      E            E         +E  +     T L 
Sbjct: 28  EARQQETQDLLNSATVKLNSCLEEKASATTRVKSLEERIAEMRKDKNELIQSSKDLTMLT 87

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222
           K         L  L ++ +   + +  L        + ++ L  +       +     + 
Sbjct: 88  KQGASNLEKSLESLKEKDLKINRLQDALTKKDSVTLALVTSLKKEVGINDTDIEINVEKG 147

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF--RN 279
            + IS+ D+    +F   S         +L K+  V+         + GHTD  P+    
Sbjct: 148 VVFISLSDK---VLFKSGSYNITSRAEEILGKVATVINGKPNFEALVEGHTDNVPYNKGG 204

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +  DNW LS  RA +  + L+  G +  ++    G +     + +    +   NRR  I 
Sbjct: 205 VLIDNWDLSAKRATAIVRKLVDLGANPAQLIAA-GRSEFVPLVDNSTAENRSTNRRTKIY 263

Query: 338 VEDR 341
           V  +
Sbjct: 264 VLPK 267


>gi|220917668|ref|YP_002492972.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955522|gb|ACL65906.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 259

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226
           +   +    P  +      +  + ++ L K+I   +   V +      V        + +
Sbjct: 71  DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDN 284
            +        FD   +   P+ + +L  I   +      + + GHTD +P         N
Sbjct: 131 RLAATE---FFDPGQAALRPQALALLDAIAVEIVPLERPLRVEGHTDETPVGSGGRWMSN 187

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           W LS  RA +    L ++  +   +    G              +   NRR+++++E
Sbjct: 188 WELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVELVLE 244



 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + YADFMT+L AFF+VM+ ++  D+       +          T   G     + P  
Sbjct: 16  WLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPS 75

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                   +      ++     +    +++    +         S   E  + ++   + 
Sbjct: 76  EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135

Query: 153 KGKDLCKSTDLEKSINKEENYFLP 176
           +  D  ++    +++   +   + 
Sbjct: 136 EFFDPGQAALRPQALALLDAIAVE 159


>gi|197116705|ref|YP_002137132.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
 gi|197086065|gb|ACH37336.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
          Length = 169

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 8/117 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           + +++    F    +   P     +  I  ++       + + GHTD          N +
Sbjct: 56  VQNEKGPIKFKTGKAEIDPSCDKTMTAIAAIMTDYPGFHVQVDGHTDNV---GKPEANQK 112

Query: 287 LSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           LS DRA +  + L+    V   R+S   GF   +    +      + NRR+D  V  
Sbjct: 113 LSQDRADAVVKYLVDKKAVDAKRLSA-KGFGDSKPIADNKTKAGQAKNRRVDFTVTK 168


>gi|331004883|ref|ZP_08328300.1| Outer membrane protein [gamma proteobacterium IMCC1989]
 gi|330421337|gb|EGG95586.1| Outer membrane protein [gamma proteobacterium IMCC1989]
          Length = 197

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         L          +   IS+ GH D+         N  LS  RA + 
Sbjct: 90  FATNSAELKDAGKAALNTFATRAKALNVSGISVVGHADSR---GAESYNQALSEKRANTV 146

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
              L   G+    + +  G        ++D     + NRR+DI V  
Sbjct: 147 KSYLESQGIVGS-LIRAEGQGETSPVASNDTAEGRAQNRRVDITVRG 192


>gi|322417875|ref|YP_004197098.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
 gi|320124262|gb|ADW11822.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
          Length = 198

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
            K    + +  + P +  +  A  + ++     +   ST +   +    + V      + 
Sbjct: 23  AKQQAVKADQAVAPSATAQPSAPVQPQQPAASQQASPSTTALSASSIKAEPVQPAAAGSQ 82

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
              +  D      FD  S +        L      L       I + G+ D         
Sbjct: 83  QGAAAADALEKIYFDFDSDLLSDAARKTLTDNFVKLKAMPNVKIRVEGNCDER---GSDE 139

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
            N  LS  RA +A + L   GV   R+S I G+   +   +  SD   + NRR +  +
Sbjct: 140 YNLALSERRAQAAVKYLTALGVPASRLSAI-GYGEEKPADSGHSDDAWARNRRDEFNI 196


>gi|282600293|ref|ZP_05973733.2| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
 gi|282565742|gb|EFB71277.1| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
          Length = 586

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 12/175 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV----LFETTRTGILIS 227
                  ++      +       LA      L   +   +                +   
Sbjct: 387 QQLQEDAAQLSRWEREGIPTAYSLALYQGERLLPYLHTLLGSWAPTQPKIIPNAPVLAPE 446

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           ++   +  +FD        +   VL      +   +   I + G+TD++        N +
Sbjct: 447 MVTLDSLSLFDVGQYTLKTDATKVLVDALLNIKAKSGWLIVVSGYTDST---GNPELNQK 503

Query: 287 LSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           LSL RA S    +++ S +S      + G+  +    +++     + NRR++I +
Sbjct: 504 LSLKRAESVRDWMIQTSDISPT-CFAVQGYGQNNPVASNETSEGRAQNRRVEIRL 557


>gi|254449210|ref|ZP_05062659.1| outer membrane protein [gamma proteobacterium HTCC5015]
 gi|198261187|gb|EDY85483.1| outer membrane protein [gamma proteobacterium HTCC5015]
          Length = 229

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 58/204 (28%), Gaps = 14/204 (6%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                 R            +                 +      K+   + ++AK+  + 
Sbjct: 28  SSGESVRTGTGDCVKTGQWEEAHKGQDCGMRANDSKRRIPTPVSKKPIDMDEVAKRKKAQ 87

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                     +      +   I +S     +   F   S+    +    L  +   L   
Sbjct: 88  EKAAAEQKAEEQKKALDSVRSINLS-----SGAAFSTGSAKLSSKGKESLDDLAMKLKAL 142

Query: 263 TE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 + I GHTD+         N R+S  RA +    L++ GV    +    G+   +
Sbjct: 143 GNGVKSVQIDGHTDSQ---GSESLNQRVSEQRAQAVKSYLVEQGVDGS-LINTKGYGESQ 198

Query: 320 LKIASDPM--NSANRRIDILVEDR 341
               +      + NRR++I V+  
Sbjct: 199 PVADNATAAGRAQNRRVEISVDGD 222


>gi|149277299|ref|ZP_01883441.1| OmpA/MotB [Pedobacter sp. BAL39]
 gi|149232176|gb|EDM37553.1| OmpA/MotB [Pedobacter sp. BAL39]
          Length = 464

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ +SS+   E+   L K+  VL  +   +++ G+  +      A  N +LS DRA S  
Sbjct: 364 FEFNSSVLKTESYPTLDKLSSVLRENGGKVTLHGYASSE---GTAAYNVKLSKDRANSVK 420

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
             L+ SGV+   +    G        ++D       NRR++
Sbjct: 421 TYLVNSGVNSSAVVT-KGHGEANPIASNDTEEGRIQNRRVE 460


>gi|120437200|ref|YP_862886.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117579350|emb|CAL67819.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 522

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 19/274 (6%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD-LKIGSTNQKKQYQRLENNIFYLSNS 137
            SK  F    P    S +   + ++E  T  +   L  G    ++      ++   L  +
Sbjct: 241 GSKLYFASDMPGGSGSFDIYVVDVNEDGTYGTPQNLGAGVNTAQRDQFPFISDEDVLYFT 300

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                   +L     +G         E   +  +++       E++      +R  D   
Sbjct: 301 SDGHQGFGNLDIFRTEGDFSEVENLGESINSGSDDFAFVIKESEEMGYFASNRRGTDNLY 360

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           + +   + ++       V  ET+   I   I    +   FD   +    E+  VL  +  
Sbjct: 361 QFTREENEIIE---APTVTDETSGQDI---IPIDGSKIYFDFDKATIKAESKPVLDSVVT 414

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +     +   +  H DA         N  LS  RA S    L++ G+ + R++   G+ 
Sbjct: 415 YMNDYPNIKVKVESHADAR---GSDSYNMALSKRRAASTVDYLVEKGIDKARLTS-EGYG 470

Query: 317 HHRLKIA-------SDPMNSANRRIDILVEDRQG 343
             R           ++   + NRR   +V +R G
Sbjct: 471 ESRPTNDCTQPTGCTNEQYAKNRRSAFVVSNRNG 504


>gi|313674269|ref|YP_004052265.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312940967|gb|ADR20157.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 526

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  + +F + +S     +   L ++  +L  +    I + GHTD +     A+ N  LS 
Sbjct: 417 QLKSVLFKRGTSEIKDGSFEELDRVYTMLKKNPTVEIELAGHTDNT---GSAKLNIELSQ 473

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            R+    + L++ G++  R+    G+   R   ++    +   NRR++  +
Sbjct: 474 KRSDKIKEYLVEKGINPKRLQS-KGYGGARPIASNKSEATRKLNRRVEFTI 523


>gi|149915641|ref|ZP_01904167.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
 gi|149810533|gb|EDM70376.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
          Length = 218

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+         L      +    E    + GHTD          N  L   RA + 
Sbjct: 74  FAFDSAHLDAAARNTLNAQASWIKQFPEVRFRVYGHTDKV---GSESYNRHLGQRRANAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  +   +  + ++     NRR
Sbjct: 131 VNYLTSHGISRSRLEAVVSYGETQPVVVTEGREPRNRR 168


>gi|325526573|gb|EGD04123.1| OmpA/MotB domain-containing protein [Burkholderia sp. TJI49]
          Length = 112

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           R   +FD   +   P  +  L ++ +        ++ + G+TD+         N  LSL 
Sbjct: 4   RGDALFDFDKANLKPAGVRALDEVIDNARGKRFRLVEVAGYTDSI---GSDSYNNALSLR 60

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           RA S    L   G+  +R+  + GF       +       + NRR++I++E 
Sbjct: 61  RAKSVADYLRAHGLDAERM-AVDGFGKSNPVASDATDAGRAQNRRVEIVLEQ 111


>gi|260774918|ref|ZP_05883819.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609173|gb|EEX35331.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 321

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S+   PE+ + L+++   +    +  + + G+TD       A  N +LS  RA 
Sbjct: 210 VSFKFDSAELTPESEMALKEVASFMGEYPQATVDVVGYTDT---SGPAVYNQKLSEQRAQ 266

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S   V+ + GV++ RI  + G         ++  +    NRR ++ V +
Sbjct: 267 SVADVIAEYGVNQSRIH-VEGAGESNPIATNETRDGRIENRRAEVTVNE 314


>gi|295085810|emb|CBK67333.1| Flagellar motor protein [Bacteroides xylanisolvens XB1A]
          Length = 256

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 25  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 85  QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 202 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 237


>gi|167905004|ref|ZP_02492209.1| OmpA family protein [Burkholderia pseudomallei NCTC 13177]
          Length = 524

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 18/167 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMFD 238
           + RL+     I  TL   V      G+         L +++D               +F 
Sbjct: 350 QARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFA 409

Query: 239 KSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
              +   P       +     +LA+  + + I GH D+         N++LS  RA +  
Sbjct: 410 AGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAIR 466

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
              +  GV + R   + G         +D     + NRR+++L+   
Sbjct: 467 DWFVDQGVLKTRFI-VQGAGDTHPIADNDSSSGRAQNRRVEVLLIPD 512


>gi|71907729|ref|YP_285316.1| hypothetical protein Daro_2103 [Dechloromonas aromatica RCB]
 gi|71847350|gb|AAZ46846.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 214

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 20/164 (12%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                ++++++ +     +   L+G +A           T   I IS        +F  +
Sbjct: 46  SLESEIQKRQQEEQRRMALEKALAGPLASG-----RVTLTNGKIGIS-----GNVLFALN 95

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNI---ARDNWRLSLDRAY 293
           S    PE   +L+ + + +A        ++ + G TD  P R       DNW LS  RA 
Sbjct: 96  SDQLQPEGKQLLKSLSQPIAAYLGASEQMLMVSGFTDDMPVRGSNRQFADNWELSAQRAL 155

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
           +  + L+  GV    I   + F   +    +      + NRR++
Sbjct: 156 TVTRTLIDDGVPASSIFAAA-FGAQQPVADNAAAEGRARNRRVE 198


>gi|167576592|ref|ZP_02369466.1| hypothetical protein BthaT_00570 [Burkholderia thailandensis TXDOH]
          Length = 433

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 12/229 (5%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +Q ++    +   +                     L +S     + +          +  
Sbjct: 205 EQIRQRLWTLITGARDAIQPELSPHWRGAEPGKLPLLRSVPAWATGSFVFLLLFGLFAFY 264

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233
           +   +  +  L+     I+          +   +L +      L+++ +         R 
Sbjct: 265 QYRLLTERNALEARILAIAKDEPASPQQRLRLSILLKNEIARGLLTVDEDDTRSVVVFRG 324

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
             MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N  LS  RA
Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
               Q+L++ G   D I    G    +    +      S NRR++I V 
Sbjct: 385 AYVAQILVQRGTPADHIRS-EGRGDAQPVAENTTPAGRSRNRRVEIAVT 432


>gi|309782503|ref|ZP_07677227.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
 gi|308918840|gb|EFP64513.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 415

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  E   T   ++        MF    +    +   +L KI   +      
Sbjct: 282 LKDEIARGQVKVEEDATHSAVTFRGDD---MFAGGRADVNAKVQPLLDKIASEITKVPGK 338

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GH+D  P +      N  LS +RA    + L   GV++ R+  + G         +
Sbjct: 339 VTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVAQGRLEAV-GKGDTEPVADN 397

Query: 325 DP--MNSANRRIDI 336
                 +ANRR+ I
Sbjct: 398 STWNGRAANRRVQI 411


>gi|241663269|ref|YP_002981629.1| type VI secretion system OmpA/MotB family protein [Ralstonia
           pickettii 12D]
 gi|240865296|gb|ACS62957.1| type VI secretion system OmpA/MotB family protein [Ralstonia
           pickettii 12D]
          Length = 415

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V  E   T   ++        MF    +    +   +L KI   +      
Sbjct: 282 LKDEIARGQVKVEEDATHSAVTFRGDD---MFAGGRADVNAKVQPLLDKIASEITKVPGK 338

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ GH+D  P +      N  LS +RA    + L   GV++ R+  + G         +
Sbjct: 339 VTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVAQGRLEAV-GKGDTEPVADN 397

Query: 325 DP--MNSANRRIDI 336
                 +ANRR+ I
Sbjct: 398 STWNGRAANRRVQI 411


>gi|222055877|ref|YP_002538239.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221565166|gb|ACM21138.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 530

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 84/293 (28%), Gaps = 18/293 (6%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
           A++++ K    Q   P     +++         P  +          +  I      +  
Sbjct: 250 ASEEEEKDKKAQVVRPVKIMPISSLIKTALPAVPVSKLEVPVDPDKEEIVIKPFGQIVIP 309

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
                      L +    +   Q     K       +  +      + E ++  ++    
Sbjct: 310 AQPVAPPVVLPLMSREPKVQPVQPKVQPKVQPVVQPKVQEPKITKLETEITVEPKKEIPA 369

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                E+  A           +  S  +S   A  I   +L         I         
Sbjct: 370 NLNPIEESSAEGVSPLYGIETRGDSLEISTAKAAPIATKMLVYRKFRFADI--------- 420

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAY 293
           MF+   +    E    L ++ E          + I GHTD+         N  LS+ RA 
Sbjct: 421 MFEFGQADLSNEVKKSLSEVAEQARADKHWTYMRIDGHTDSI---GSTGYNMDLSVKRAI 477

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           +    L +K G+   ++  I G    +L   +        NRR +IL    +G
Sbjct: 478 AIASYLIIKEGIDPSKVF-IKGLGKSKLIGDNSTTEGRRLNRRFEILFLVPKG 529


>gi|254464778|ref|ZP_05078189.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206685686|gb|EDZ46168.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 613

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 85/224 (37%), Gaps = 17/224 (7%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                 Q+          +++ +      DL  ++ +  +        E+    + +   
Sbjct: 392 EQLGGLQAILDDYQTRDAAQQVQLQNLGQDLNAALARAASEERRRRLLEEQERKRLEAEA 451

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIV 250
           + LA K +  L    ++   +      T+ G+ I        +  +F   S+   P   V
Sbjct: 452 EALASK-AQDLERYRSEFFGRLRDLLGTQEGVRIQGDRFVFASEVLFAPGSATLSPAGKV 510

Query: 251 VLQKIGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLM 300
            + K+  +L           + +I + GHTD +P        DNW LS  RA S  + ++
Sbjct: 511 EIAKVVSILQSVVAAIPPEISWIIRVDGHTDDTPLVAHPKFNDNWELSQGRALSVVRYMV 570

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           ++ GV   R+   +GF  ++   ++      + NRRI++   ++
Sbjct: 571 EALGVPPSRL-AANGFGEYQPVNSAGTPEARAQNRRIELKFTEK 613


>gi|110597916|ref|ZP_01386198.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
           ferrooxidans DSM 13031]
 gi|110340493|gb|EAT58979.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
           ferrooxidans DSM 13031]
          Length = 229

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                 N V GV  E    GI +++    +  +F   SS     +   ++K+  +     
Sbjct: 82  QAAEIRNEVNGVQVEREGEGIRVTM---DSGILFTSGSSTLTSTSRANIEKLARIFNRYN 138

Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +   +  GHTD +     A  N  LS  RA S  ++L   GVS+ R+S + G+   R   
Sbjct: 139 DTKVVIEGHTDNT---GSAASNQLLSERRAESVAKLLSAYGVSDRRLSPV-GYGQSRPVA 194

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           ++D       NRR+++L+   +
Sbjct: 195 SNDTEYGRQNNRRVEVLIYANE 216


>gi|91218366|ref|ZP_01255310.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
 gi|91183504|gb|EAS69903.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
           700755]
          Length = 277

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 10/242 (4%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +  N  + +      + + + LE+ +  +    +  + K +     ++G  +    + 
Sbjct: 27  TELEGNLNETESELVQTRLEKEDLESQMEQIEMRVEGYNNKIASLSTEKEGMMVQVPNEN 86

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
                  +      L       ++  K L+D      +             +      T 
Sbjct: 87  LVLSENNKAAMRKTLKSVPAAKLEGAKSLKDSLNIAIAHNISKNMGESGSDLNISIEETM 146

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           + I+I D     +F  SS     +   +L +I +VL       + + GHTD+   +  + 
Sbjct: 147 VKINIDDNL---LFGDSSFRVGSDADEILSRIAKVLNSEPSLEVLVEGHTDSRTIKKDSY 203

Query: 283 --DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             DNW LS  R+ +  + L    GV+ D++  ++G + +   + +D  +  + NRR  I+
Sbjct: 204 IIDNWDLSARRSAAIVRRLENKFGVASDQLI-VAGRSSYDPLVPNDTKDNMAKNRRTQIV 262

Query: 338 VE 339
           + 
Sbjct: 263 IM 264


>gi|58427732|gb|AAW76769.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 272

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
              +  G    +    R+ NN+     S +        +  S        +  +   + +
Sbjct: 45  RPVIVEGVVPDQATKVRILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 104

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                L    +   ++ +     Q        +L+   +  +   +    +  G+L   +
Sbjct: 105 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 164

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             R    F   SS   P  + +L ++ E ++   +    I GHTD          N  LS
Sbjct: 165 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 220

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             RA +    +++ G+   R++ + G    +    +      + NRRI   ++
Sbjct: 221 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 272


>gi|312173865|emb|CBX82119.1| putative type VI secretion system-associated hypothetical protein
           [Erwinia amylovora ATCC BAA-2158]
          Length = 551

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFD 238
            + +++ + +   +       +   + + +         LI +              +FD
Sbjct: 374 ERWQRQGEPMRYGLGYYPGQRLWLVLQQAIDSWVPAPPSLIPVEKDTPQAVRLDALSLFD 433

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                  P +  +L K    +       I + GHTD +     A  N  LS  RA +   
Sbjct: 434 TGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT---GEANANQVLSHKRAEALRH 490

Query: 298 V-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             L  S VS      + G+   R   ++D +     NRR++I +
Sbjct: 491 WMLSTSDVSPT-CFAVQGYGATRPIASNDTVEGREANRRVEISL 533


>gi|292489687|ref|YP_003532577.1| putative type VI secretion system-associated protein [Erwinia
           amylovora CFBP1430]
 gi|292898097|ref|YP_003537466.1| outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291197945|emb|CBJ45046.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291555124|emb|CBA23275.1| putative type VI secretion system-associated hypothetical protein
           [Erwinia amylovora CFBP1430]
          Length = 551

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFD 238
            + +++ + +   +       +   + + +         LI +              +FD
Sbjct: 374 ERWQRQGEPMRYGLGYYPGQRLWLVLQQAIDSWVPAPPSLIPVEKDTPQAVRLDALSLFD 433

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                  P +  +L K    +       I + GHTD +     A  N  LS  RA +   
Sbjct: 434 TGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT---GEANANQVLSHKRAEALRH 490

Query: 298 V-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             L  S VS      + G+   R   ++D +     NRR++I +
Sbjct: 491 WMLSTSDVSPT-CFAVQGYGATRPIASNDTVEGREANRRVEISL 533


>gi|167826034|ref|ZP_02457505.1| ompA family protein [Burkholderia pseudomallei 9]
          Length = 247

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154
           +     +    +   G      +          L   + +    N + +           
Sbjct: 4   AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 63

Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
              ++ K    +     +    +     +    +  + + Q LA  +++ L+      I 
Sbjct: 64  WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 121

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
            G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GH
Sbjct: 122 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGH 180

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD          N  LS  RA +    L+  G++  +++  +G    +    +D     +
Sbjct: 181 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 236

Query: 330 ANRRIDI 336
            NRRI+ 
Sbjct: 237 RNRRIEF 243


>gi|116249829|ref|YP_765667.1| hypothetical protein RL0063 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254477|emb|CAK05551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 418

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266
            ++  K    E  +  +            F    S   P    +L  I   L +  +   
Sbjct: 52  QEDEAKHYSKEAMQQALQTRDQYDVYGLRFGVGKSTLQPGAETLLDDIATALKNFPDWSL 111

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            I GHTDA      A  N RLSL+RA +    L++ GV+ DR+    G    R   +++ 
Sbjct: 112 RIVGHTDA---SGNAETNERLSLERANAIKAALVERGVNTDRLLAA-GAGQTRPIASNET 167

Query: 327 MNSA--NRRIDIL 337
                 NRR++++
Sbjct: 168 AEGKALNRRVELV 180


>gi|110680553|ref|YP_683560.1| hypothetical protein RD1_3382 [Roseobacter denitrificans OCh 114]
 gi|109456669|gb|ABG32874.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 659

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 75/222 (33%), Gaps = 16/222 (7%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             +  + +       +  SE    L +    E+     E      L +EK        RL
Sbjct: 441 DDAKERDAAQQVQLQSLGSELNTALARVAAEERRRAALEEAERVRLQEEKARLEAEAARL 500

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
               K +    S        + VL       I        +  +F+ + +    E    +
Sbjct: 501 TAQTKNLEQYRSEFFGRL--RDVLGRQEGVRIEGDRFVFSSEVLFEPARADLSSEGQEEI 558

Query: 253 QKIGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK- 301
            K+  +L+            +I + GHTD  P        DNW LS  RA S  + ++  
Sbjct: 559 AKVARILSSVADEIPPEIDWIIRVDGHTDNLPLSGVGQFADNWELSQGRALSVVKYMVDT 618

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            G+  +R+   +GF   +     D     + NRRI++   +R
Sbjct: 619 LGIPPNRL-AANGFGEFQPVAVEDTPEARAQNRRIELKFTER 659


>gi|62185545|ref|YP_220330.1| putative peptidoglycan-associated protein (periplasmic)
           [Chlamydophila abortus S26/3]
 gi|62148612|emb|CAH64384.1| putative peptidoglycan-associated protein (periplasmic)
           [Chlamydophila abortus S26/3]
          Length = 191

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E  + +      ++       + I GHTD       A  N  L   RA +
Sbjct: 87  FATDSYTIKGEENLAILSSLVRQMQKSPKATLYIEGHTDER---GAAAYNLALGARRANA 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G+S DR+  +S +   +   +  ++     NRR +  +  R
Sbjct: 144 VKQHLIKQGISADRLFTVS-YGKEQPINSGHNELAWQQNRRTEFKIHAR 191


>gi|312887507|ref|ZP_07747103.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311299995|gb|EFQ77068.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 630

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD +      E+   L K+   L  +    I + GHTD      +   N  LS +R
Sbjct: 524 KNIFFDTNKYDIKDESKTELAKLIAFLNDNPSVKIEVSGHTDNV---GVDAINQTLSQNR 580

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A + YQ L+   +S +R+    G+   +    +        NRR +  +
Sbjct: 581 AKAVYQYLIGQHISPNRLV-YKGYGKAQPIAPNTNEEGRKLNRRTEFKI 628


>gi|167583014|ref|ZP_02375888.1| OmpA domain protein [Burkholderia thailandensis TXDOH]
          Length = 324

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 78/242 (32%), Gaps = 13/242 (5%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-- 158
           S           +  G     +  +         +    +   +  +   +         
Sbjct: 86  SSPPPANAAPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGNVATPPNWSANV 145

Query: 159 -KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K    +     +    +     +    +  + + Q LA  +++ L+      I  G+  
Sbjct: 146 QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 203

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
             +  G+L   +  R    F+  S+   P+   +L ++   LA        I GHTD   
Sbjct: 204 SASEQGLLDQTLANRTIE-FETGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDN-- 260

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                  N  LS  RA +    L+  G++  +++  +G    +   ++D     + NRRI
Sbjct: 261 -SGNRASNIALSQSRADAVKGYLVTKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRI 318

Query: 335 DI 336
           + 
Sbjct: 319 EF 320


>gi|157889026|dbj|BAF80970.1| fibronectin-binding protein [Campylobacter lari]
          Length = 328

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    +Q++G+VL  + +  +I  GHTD          N +LSL+RA   
Sbjct: 224 FGFDQTDINPEFAQKIQEVGKVLEENPQYYTILEGHTDNI---GPKAYNQKLSLERAKVV 280

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            + L K+GV++++I    G+   + K ++D     + NRR++
Sbjct: 281 AKELEKTGVTKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321


>gi|153870654|ref|ZP_02000009.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
 gi|152072883|gb|EDN69994.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
          Length = 187

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +FD  S++  PE+  +L++  + L        I I GHTD          N  LS  R+ 
Sbjct: 81  LFDFDSAVIKPESYPLLREFAKALQSGLVDAQIIIAGHTDN---SGTETYNLNLSEQRSQ 137

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           S    L+   G+++ R+  I      +    ++  +    NRR++ +
Sbjct: 138 SVKAFLISAYGIADTRL-TIKAHGESQPIEPNETESGRMKNRRVEFI 183


>gi|83716132|ref|YP_438328.1| hypothetical protein BTH_II0126 [Burkholderia thailandensis E264]
 gi|167614770|ref|ZP_02383405.1| hypothetical protein BthaB_00705 [Burkholderia thailandensis Bt4]
 gi|257141357|ref|ZP_05589619.1| hypothetical protein BthaA_19439 [Burkholderia thailandensis E264]
 gi|83649957|gb|ABC34021.1| OmpA domain protein [Burkholderia thailandensis E264]
          Length = 433

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 90/297 (30%), Gaps = 29/297 (9%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEH 105
           FFL++  +  TD      I +                + D +   E+  Q    L     
Sbjct: 161 FFLLIGRMA-TDPQEYVDILEILYRVLGLGFEGRYSVVADGRRHLEQIRQRLWTLITGAR 219

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
                         +  +   L +   +            S       G        L  
Sbjct: 220 DAIQPELSPHWRGAEPGKLPLLRSVPAW---------ATGSFVFLLLFGLFAFYQYRLLT 270

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N  E   L     E     +R +    L  +I+  L  +  D+    V+F        
Sbjct: 271 ERNALEARILAIAKDEPASPQQRLRLSILLKNEIARGLLTVDEDDARSVVVF-------- 322

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284
                 R   MF    S  LPE   VL K+   +A     +++ GH+D  P R     +N
Sbjct: 323 ------RGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNN 376

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             LS  RA    Q+L++ G   D I    G    +    +      S NRR++I V 
Sbjct: 377 LVLSEKRAAYVAQILVQRGTPADHIRS-EGRGDAQPVAENTTPAGRSRNRRVEIAVT 432


>gi|325529870|gb|EGD06709.1| hypothetical protein B1M_00030 [Burkholderia sp. TJI49]
          Length = 214

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +L+     +   L    E++ I G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPEGRDLLKTLAGPLAAYLKTRDEILMISGFADDQQVRAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|325287672|ref|YP_004263462.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324323126|gb|ADY30591.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 285

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 12/208 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL---QDLA 196
            +        +     ++   TDL     +     L  L ++ +   K    +     + 
Sbjct: 65  EDQNDFLKANNQVLVDNMGNLTDLSAKGAENLEKSLESLKEKDLTIRKLNDAITRRDSVN 124

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +  +L G++ +   + +     +  + +SI D+    +F   S         VL K+ 
Sbjct: 125 LSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFSSGSYNVATRAKEVLGKVA 181

Query: 257 EVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKIS 313
           +V+ +  +    + GHTDA P+R  +  DNW LS+ RA +  ++L  + GV   R++   
Sbjct: 182 QVVNNKPDFEFMVEGHTDAVPYRKGVLLDNWDLSVKRATAVVRILQNEYGVDPKRMTAA- 240

Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341
           G + +    ++D   + NRR  I+V  +
Sbjct: 241 GRSQYIPVSSTD--KARNRRTRIVVLPK 266


>gi|260220860|emb|CBA28849.1| Outer membrane protein A [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 203

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+   E    L  +   +      + I  GHTDA+        N +LS+ R+
Sbjct: 94  DAFFDFDKSVLKAEGKAKLDDLVSKVKAINLEVIIAVGHTDAT---GDDSYNQKLSVARS 150

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            +    L+  G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 151 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 201


>gi|118616129|ref|YP_904461.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
 gi|118568239|gb|ABL02990.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
          Length = 332

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        P++  VL ++ + L    +  +++ G+TD          N  LS  RA + 
Sbjct: 231 FGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDN---SGSEGLNIPLSAQRAQTV 287

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L+  GV+ D I+   G        ++D       NRR++I+V
Sbjct: 288 ADFLVAHGVATDHITA-KGLGSANPIASNDTAEGRIKNRRVEIVV 331


>gi|317153382|ref|YP_004121430.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943633|gb|ADU62684.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 254

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 8/248 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           +  K +      +       +         +     ++  L           + T  +  
Sbjct: 2   ADKKSESKPQPELQAGVKPSQPKPDPGIPAWMATFADMVTLLLCFFVLLLSFTNTDITNF 61

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
              +    +      ++      P +       +  +  +++ +  +     + A ++  
Sbjct: 62  RLLMGSIQEALGVQYEDSGALSNPFADSSFKERQSVRENREIVEVGARLKDFIRARDLTS 121

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
                + ++G+++      N+ MF + S+   P+    L+ +   + +    + I GHTD
Sbjct: 122 MARVSSDKSGVMLRFN---NSAMFQRGSAELSPQAKPALEVVIAGMENKNFNLVINGHTD 178

Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           +    +     NW LS  RA +  +  L  S +S +R+  + G+A  +  + S    +  
Sbjct: 179 SETPESDLYTSNWELSAARAATCLRYILTHSDISANRMKAV-GYAGAKPIVPSTSEENRQ 237

Query: 331 -NRRIDIL 337
            NRR++  
Sbjct: 238 INRRVEFF 245


>gi|197122876|ref|YP_002134827.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196172725|gb|ACG73698.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 259

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226
           +   +    P  +      +  + ++ L K+I   +   V +      V        + +
Sbjct: 71  DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDN 284
            +        FD   +   P+ + +L  I   +      + + GHTD +P         N
Sbjct: 131 RLAATE---FFDPGQAALRPQALALLDAIAAEVVPLERPLRVEGHTDETPVGSGGRWMSN 187

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           W LS  RA +    L ++  +   +    G              +   NRR+++++E
Sbjct: 188 WELSAARAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVELVLE 244



 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 54/155 (34%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W + YADFMT+L AFF+VM+ ++  D+       +          T   G     + P  
Sbjct: 16  WLVSYADFMTLLFAFFVVMYAVSRVDNKRVVQATESIRWAMHFSGTGGTGALPLFDGPPS 75

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
                   +      ++     +    +++    +         S   E  + ++   + 
Sbjct: 76  EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
           +  D  ++    +++   +      +  E+ L ++
Sbjct: 136 EFFDPGQAALRPQALALLDAIAAEVVPLERPLRVE 170


>gi|120556561|ref|YP_960912.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120326410|gb|ABM20725.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 401

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS+        ++++ + +    E    I GHTD+      A  N  LS  RA + 
Sbjct: 296 FPTNSSVIDNAYDNEIRRVADFMEEYPETTVEIAGHTDS---AGEAGYNQFLSQRRAEAV 352

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              L    GV  DR+S + G+        +D     + NRR++  ++ R+
Sbjct: 353 AGRLTGPLGVDPDRVSAV-GYGEAEPVATNDTPAGRAQNRRVEARIQVRR 401


>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
 gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
          Length = 343

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
             I   + +  ++ +F   S     E +  L  I   L    E   ++ G+TD++     
Sbjct: 218 PIITTRLPEVHSSVLFAFDSEKI--ENVEALNPIVYRLTRYPETRATVYGYTDST---GP 272

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              N  LS  RA + Y+ L  +GVS +++ +++G+      + +D       NRR+ + +
Sbjct: 273 NEYNQSLSERRANAVYEYLKHAGVSTEQL-RVAGYGEDSPVVPNDTTEHRHMNRRVTVHI 331

Query: 339 ED 340
           E+
Sbjct: 332 EE 333


>gi|253568033|ref|ZP_04845444.1| outer membrane protein [Bacteroides sp. 1_1_6]
 gi|298387668|ref|ZP_06997219.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
 gi|251842106|gb|EES70186.1| outer membrane protein [Bacteroides sp. 1_1_6]
 gi|298259524|gb|EFI02397.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
          Length = 260

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 96  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNATLSAAAKSALSKFA 154

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   +RN   +     N  LS +RA S    L+  GVS ++I
Sbjct: 155 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQI 214

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 215 KGVQGMGESDPIASNDTAAGREQNRRVEVYMYASE 249


>gi|319785152|ref|YP_004144628.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171040|gb|ADV14578.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 335

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 85/264 (32%), Gaps = 8/264 (3%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
            +    +++ PE   Q      +   +   S  L++ S+ +     +  + +F  ++ + 
Sbjct: 76  ERNAMKDRSGPEWLKQQGRASELRYELPPGSSSLEVASSYEADLKAKGFSILFSCADQEC 135

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                  L    E+       +       +     L        ++    +        +
Sbjct: 136 LVGNLRDLYLLGEQLDPTNGISTAYADHVRYLLAKLERPEGAIYVSAMAGEDKDRAVVFV 195

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               +  +    V     E     +           +FD +     PE+   L +I +VL
Sbjct: 196 RVLEAKGMDPAKVATAAPEDLSDSLASQGSVNLYGILFDYNQDAVKPESKPALDEIAKVL 255

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
                  + I GHTD       A  N  LS  RA +    L+   G+   R+    G   
Sbjct: 256 TDKPALRLKIIGHTDN---AGSAAYNLDLSTRRAANVSAALVGGYGIDPARL-SFEGAGL 311

Query: 318 HRLKIASDP--MNSANRRIDILVE 339
            R   ++D     + NRR++++V+
Sbjct: 312 SRPIESNDTDEGRAKNRRVELVVQ 335


>gi|330500929|ref|YP_004377798.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
 gi|328915215|gb|AEB56046.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
          Length = 443

 Score = 93.9 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285
           S++  R   +F   S+    +   +L +I E +A     + I GH+D  P        NW
Sbjct: 324 SVVTIRGDELFSSGSASIRDDFQPLLLRIAEAVAKVKGQVRITGHSDNQPIATLRFPSNW 383

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            LS  RA    Q+L       +R S   G +      ++      + NRR++I V  
Sbjct: 384 ALSRARAEEVLQILAARTGQAERFSA-EGLSDTEPLASNATAEGRAKNRRVEITVLA 439


>gi|296271167|ref|YP_003653799.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
           43833]
 gi|296093954|gb|ADG89906.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
          Length = 176

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIVVLQ 253
           I  ++  L   + ++ +        +   + D+      +  +F    +         + 
Sbjct: 26  IQESIRDLAVSDFIRDLTLTIEPLEVETQVGDRTTVSISSDVLFAFDKADLTEVAKRRIA 85

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           ++ + L +   V+ + GHTDA      A  N RLS  RA +  + L K+ V   +I  + 
Sbjct: 86  ELAKRLQNVKGVVLVEGHTDAL---GSAAYNLRLSRLRANAVKEELSKA-VPGLQIKAV- 140

Query: 314 GFAHHRLKIASDP--------MNSANRRIDI 336
           G+   R    +            + NRR+ I
Sbjct: 141 GYGETRPIAPNKTKDGKDNPEGRAKNRRVTI 171


>gi|167721446|ref|ZP_02404682.1| ompA family protein [Burkholderia pseudomallei DM98]
          Length = 243

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------- 154
                +    +   G      +          L   + +    N + +            
Sbjct: 1   GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNW 60

Query: 155 -KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             ++ K    +     +    +     +    +  + + Q LA  +++ L+      I  
Sbjct: 61  SANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GHT
Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHT 177

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D          N  LS  RA +    L+  G++  +++  +G    +    +D     + 
Sbjct: 178 DN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRAR 233

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 234 NRRIEF 239


>gi|163737814|ref|ZP_02145231.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
           BS107]
 gi|161389340|gb|EDQ13692.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
           BS107]
          Length = 655

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 96/308 (31%), Gaps = 17/308 (5%)

Query: 50  VMWIINATDDDTKKAIEQY-FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           ++  ++  +     A ++          +T  +    E       ++ +  L      + 
Sbjct: 349 LLDALSQLEQANAAAADREVLQQRLLAALTEGEERAVETAELASLAEQRAALLAQARASL 408

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           ++         ++      +                +   RD+ +   +        +  
Sbjct: 409 STEQAVSEEAQRQTALLNQQVAALREQLGGLQTLLDDYKARDAAQSVQMQNLGQDLNAAL 468

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                        +    KR +   +     +  L    ++   +       + G+ I  
Sbjct: 469 ARAAAEERRRRLLEESERKRLETEAEQLSSKAQDLEQYRSEFFGRLRDVLGNQEGVRIEG 528

Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP-- 276
                 +  +F   S+         + K+  +L             +I + GHTD +P  
Sbjct: 529 DRFVFASEVLFAPGSADLSSAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLG 588

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
                 DNW LS  RA S  + ++++ G+  +R+S  +GF  ++    +      + NRR
Sbjct: 589 IHPKFADNWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAPTAVARAQNRR 647

Query: 334 IDILVEDR 341
           I++   +R
Sbjct: 648 IELKFTER 655


>gi|260062002|ref|YP_003195082.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
 gi|88783564|gb|EAR14735.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
          Length = 375

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 7/108 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F+  +          L ++ + L    +  + +RGHTD+         N +LS  R  +
Sbjct: 263 LFEFDAHQLTDAGKEALHRVYDALRSDLSLFLELRGHTDSR---GAPAYNQQLSEQRCRA 319

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
             + L   G+   RI +  GF   R    +  +     NRR++ L+  
Sbjct: 320 VARYLEGLGLDSVRI-RWIGFGAARPVAGNSSESGRRRNRRVEFLIRS 366


>gi|153950607|ref|YP_001399766.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152962102|gb|ABS49563.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
          Length = 573

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD       P +I +L      +       I + GHTD       A+ N  LSL 
Sbjct: 442 DSLSLFDVGKFQLKPGSIKMLVDALMNIRAKPGWLIVVAGHTD---ITGDAQANQILSLK 498

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +     L  S VS      + G+   R    ++       NRR++I +
Sbjct: 499 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPVATNESAEGRAANRRVEISL 548


>gi|294644876|ref|ZP_06722614.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294808230|ref|ZP_06766993.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|292639770|gb|EFF58050.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294444557|gb|EFG13261.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 256

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 25  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 85  QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 202 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 237


>gi|307729050|ref|YP_003906274.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307583585|gb|ADN56983.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 168

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               +FD + S    +   V+ +   +L  S + I + G+TD          N +LS  R
Sbjct: 52  PEKALFDFNKSDVRSDASGVIDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L+  GV+ DRI +  G A++    ++D     + NRR +I+V  
Sbjct: 109 AVAVGYALVARGVAMDRI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158


>gi|163753146|ref|ZP_02160270.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
 gi|161326878|gb|EDP98203.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
          Length = 543

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 15/152 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVVLQK 254
                    D+    V  +  +    I   D     +     FD +  +   E+ + L K
Sbjct: 396 EEEFESFRGDDFKHTVTIKLPQAKAEIVKEDEKLMIKIENIYFDYNKWMLKDESTLSLNK 455

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I +VL  + E+   I  HTD       A  N +LS  RA SA   L+K+G+   R+   +
Sbjct: 456 IIDVLNENPEMKIEINAHTDNR---GRATYNSKLSNKRAASARAYLLKNGIDASRVIS-N 511

Query: 314 GFAHHRLKIASDPM--NSA---NRRIDILVED 340
           G+   +           +    NRRI+ L+ +
Sbjct: 512 GYGESQPIEDCGTKCSEAQHETNRRIEFLIVE 543


>gi|116249130|ref|YP_764971.1| putative outer membrane porin involved in nitrogen fixation
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|16326461|gb|AAL17783.1|AF361470_3 ImpK [Rhizobium leguminosarum bv. trifolii]
 gi|115253780|emb|CAK12174.1| putative outer membrane porin involved in nitrogen fixation
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 510

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 67/202 (33%), Gaps = 8/202 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +     E+   L         +   E     P                    ++ + L
Sbjct: 283 NRASDGTFERLARLPPRDMPSVLVKVPEPPRQQPPVVVAETPPPPPPPQVKPPSRLDNLL 342

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + L  +   K V    +   +L+ I    N+ +F   S+    +   +LQ+IG  LA   
Sbjct: 343 AFLQPEVEKKLVTLSDSNGRLLVRI---SNSGLFATGSAEVSQKFHDLLQRIGGALAAEN 399

Query: 264 EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
               + G+TD  P R      NW LS  RA +  ++L         ++   G A      
Sbjct: 400 FRAVVVGYTDNVPIRTVQFPSNWHLSEARAKAVGEILSSFTGPGAILT--EGRADTDPIA 457

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           A+D       NRR +ILV    
Sbjct: 458 ANDTPEGREMNRRTEILVLTDP 479


>gi|304309686|ref|YP_003809284.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
 gi|301795419|emb|CBL43617.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
          Length = 353

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 8/124 (6%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
              +   +   R    F   SS   P     +QKI + +    +  ++I GHTD +    
Sbjct: 228 CELVKTVMESIRLNVQFATGSSAVAPRYHAEVQKIADFMKKYPDLTVTIEGHTDNT---G 284

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            A  N RLS  RA S  + L+   GV+ +R++ + G+   R   ++        NRR+  
Sbjct: 285 GAALNERLSSARANSVREELVNRFGVAANRVTSV-GYGPSRPVASNATAAGRQENRRVVA 343

Query: 337 LVED 340
           ++E 
Sbjct: 344 VLEK 347


>gi|29346604|ref|NP_810107.1| OmpA family outer membrane protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338500|gb|AAO76301.1| outer membrane protein, OmpA family [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 266

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 102 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNATLSAAAKSALSKFA 160

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   +RN   +     N  LS +RA S    L+  GVS ++I
Sbjct: 161 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQI 220

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 221 KGVQGMGESDPIASNDTAAGREQNRRVEVYMYASE 255


>gi|167912756|ref|ZP_02499847.1| ompA family protein [Burkholderia pseudomallei 112]
          Length = 248

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154
           +     +    +   G      +          L   + +    N + +           
Sbjct: 5   AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 64

Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
              ++ K    +     +    +     +    +  + + Q LA  +++ L+      I 
Sbjct: 65  WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 122

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
            G+    +  G+L   +  R    F+  S+   P+   +L ++   LA  +     I GH
Sbjct: 123 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGH 181

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TD          N  LS  RA +    L+  G++  +++  +G    +    +D     +
Sbjct: 182 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 237

Query: 330 ANRRIDI 336
            NRRI+ 
Sbjct: 238 RNRRIEF 244


>gi|85858721|ref|YP_460923.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
 gi|85721812|gb|ABC76755.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
          Length = 210

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 15/190 (7%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKG 214
              ++   + +  + +    P L+ E++ A ++  + Q L ++     L+G  A      
Sbjct: 32  QEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQERERLAGEKAAAEKAA 91

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
                    +L+ I        F+   S   PE+  +LQK    LA  +    +  GH D
Sbjct: 92  AEAAARAGEVLVDIN-------FEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCD 144

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331
                     N  L   RA  A + L+  G+   RI  IS +        ++   +   N
Sbjct: 145 DL---GTTEYNLALGERRAAEAMRFLVALGIDRSRIKTIS-YGEEMPLDPAETEEARAKN 200

Query: 332 RRIDILVEDR 341
           RR   +V  +
Sbjct: 201 RRAHFVVTPK 210


>gi|254254565|ref|ZP_04947882.1| OmpA domain protein [Burkholderia dolosa AUO158]
 gi|124899210|gb|EAY71053.1| OmpA domain protein [Burkholderia dolosa AUO158]
          Length = 226

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F   ++   P     L K+       T   ++I G+TD+         N  LS  R
Sbjct: 120 GDALFATGAATLTPAARASLDKLLSARDDRTYSNVTITGYTDSV---GSDASNVALSKRR 176

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L   G+ + R   ++G        ++   +    NRR++I ++ 
Sbjct: 177 AQAVAAYLNAHGL-KTRTLTVTGRGSADPVASNATADGRASNRRVEISLQR 226


>gi|332886461|gb|EGK06705.1| hypothetical protein HMPREF9456_00579 [Dysgonomonas mossii DSM
           22836]
          Length = 224

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +       V        I ++     +  +F  +SS     +   L      L ++ 
Sbjct: 80  KKELEQINGAQVESINDGQAIKVTF---ESGILFATNSSTLSSASQSALSNFAASLNNNP 136

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    I GHTD +        N  LS  RA + Y  L   GVS  R+    GF   +   
Sbjct: 137 DTDVQIYGHTDNT---GSDAINNPLSEKRAQAVYNFLQTKGVSGSRMVS-QGFGSTQPVA 192

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      + NRR+++ +   +
Sbjct: 193 DNSSVAGRAQNRRVEVYILPNE 214


>gi|317407132|gb|EFV87132.1| chemotaxis motB protein [Achromobacter xylosoxidans C54]
          Length = 218

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 20/174 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS +    +K+++      + +   L+  +A            R  ++   I   
Sbjct: 41  AVQLELSTQLEQEVKQRQEETQRRQTLEHALAAPLAAG----------RVTLINGRIGIS 90

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   VL+ + E     L  + E++ + G TD    R       DNW
Sbjct: 91  GSVLFALNSDQLQPEGREVLKSLIEPLSAYLKANDEILMVSGFTDDQQVREGNRRFADNW 150

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            LS  RA +  + L+  GV    +   + F   +   ++  +   + NRR++I+
Sbjct: 151 DLSAQRALTVTRALIDEGVPSSLVFAAA-FGAEQPVASNADEEGRAKNRRVEIM 203


>gi|209519379|ref|ZP_03268177.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209500193|gb|EEA00251.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 217

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSSKLEQEVKQRQAETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S+   PE   +L+     +   L  S +++ + G TD    R       DNW LS 
Sbjct: 93  FALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +P  + NRR++I
Sbjct: 153 QRALTVTRALIDEGVPASSVFAAA-FGSEQPVSSNADEPGRAKNRRVEI 200


>gi|187925731|ref|YP_001897373.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187716925|gb|ACD18149.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 584

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 76/285 (26%), Gaps = 26/285 (9%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD---LKIGSTN 119
           +       P   +  + +     +               + + +TK       +   + +
Sbjct: 313 QQPAAAIVPTQDSQFSFTVDAAGKPTLTATVGSEAEKTQLMDELTKRLGQYNFVPNITVD 372

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
              +      +   L         +  +     +         L      +         
Sbjct: 373 PATKPADWLAHFDSLLPLLSLPGAEVKVAGTHIELSGTAADKKLGWLDKLKSLLGTSYQI 432

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
               +A       ++    I + L+   +      V                     F  
Sbjct: 433 GSFDVAHAVADANENFRSAIKNLLAPDSSCAAADVVKVL------------NLQVINFAS 480

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDRAYS 294
           +S+      +  L++   VL             + G++D        + N +LS  RA +
Sbjct: 481 ASAHVPASAVDDLKQSARVLNACAGNGKTARLEVAGYSDNV---GGEQANLQLSKQRANA 537

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               L+K+GV  D +    G+   R   ++D  +    NRRI+ +
Sbjct: 538 VRAYLVKTGVPADSLLA-QGYGQARPVASNDTASGRFANRRIEFV 581


>gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 628

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F  +    LP +   L  +   L  +    I I GHTD +      + N  LS +R
Sbjct: 522 NNIFFALNKYDLLPSSKSDLNTLVLFLQENPLIRIEIGGHTDNT---GNDQLNKTLSDNR 578

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +    L+  G+S +R+    G+  ++    +D     + NRR +  +
Sbjct: 579 AKAVVTYLIARGISANRLLA-KGYGSNQPLATNDTETGKALNRRTEFKI 626


>gi|150025563|ref|YP_001296389.1| lipoprotein YiaD precursor [Flavobacterium psychrophilum JIP02/86]
 gi|149772104|emb|CAL43580.1| Probable lipoprotein YiaD precursor [Flavobacterium psychrophilum
           JIP02/86]
          Length = 231

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I ++   N   FD + S         L K+ +V     +  I I G+TD+         N
Sbjct: 104 IRLVLGENAIRFDTNKSTLTASAKANLDKLVKVFTEYPDTDIQIYGYTDS---SGADDYN 160

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            +LS  RA S    L   G++  R +  SG         ++  +    NRR++  +  
Sbjct: 161 LKLSEQRAASVKTYLSAKGLASTRFNT-SGLGEADPIAPNETADGKSQNRRVEFAITA 217


>gi|293369282|ref|ZP_06615869.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292635612|gb|EFF54117.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 256

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195
             Q      +L RD+ K  +  +      ++N  E   L  L  +K   +  ++R + +L
Sbjct: 25  GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84

Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              I +           +   +       +        + +++ D+    +F   S+   
Sbjct: 85  QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302
                 L K+ EVL   T++   I GHTD  P      +DNW LS+ RA S  ++L+K+ 
Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            V+  +I + SG   +     ++     S NRR +I+
Sbjct: 202 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 237


>gi|224823894|ref|ZP_03697003.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224604349|gb|EEG10523.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 221

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD            +L +    L  +    + I GHTD++        N  LS
Sbjct: 109 DIPSDVSFDSGRYDIKSNMRPILDRFATTLNQNPVTTVKIIGHTDST---GSDAINGPLS 165

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           ++RA +    L+  GV+ +RI  I G        ++      + NRR++I V
Sbjct: 166 VNRASATRSYLVARGVAMNRI-SIDGRGSSEPIASNGTAAGRAKNRRVEIFV 216


>gi|218658643|ref|ZP_03514573.1| putative outer membrane porin involved in nitrogen fixation
           [Rhizobium etli IE4771]
          Length = 262

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 8/202 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +     E+  +L         +   E     P                    ++ + L
Sbjct: 35  NRASDGTFERLANLPPRETPSVLVKVPEPPRESPPVIVAQTPPPPPPPQVKPPSRLDNLL 94

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + L  +   K V    +   +L+ I    N+ +F   S+    +   +LQ+IG  LA   
Sbjct: 95  AFLQPEVEKKLVTLSDSNGRLLVRI---SNSGLFATGSAEVSEKFHDLLQRIGGALAAEK 151

Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
               + G+TD  P R I    NW LS  RA +  ++L         ++   G A      
Sbjct: 152 FRAVVVGYTDNVPIRTIQFPSNWHLSEARAKAVGEILASFTGPGAILT--EGRADSDPIA 209

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
            +D       NRR +ILV    
Sbjct: 210 GNDTQEGREMNRRTEILVLTDP 231


>gi|37521397|ref|NP_924774.1| outer membrane protein [Gloeobacter violaceus PCC 7421]
 gi|35212394|dbj|BAC89769.1| glr1828 [Gloeobacter violaceus PCC 7421]
          Length = 227

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 20/213 (9%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                + +R  E             +++  E   + P   E           +     I+
Sbjct: 24  NPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSPTGSETAADSAGGSATRSTQ--IA 81

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           ++ + +V   +      + T +GI++++ +     +FD   +   P   V LQK+ +V+ 
Sbjct: 82  ASETQVVNQILSDF-NAQRTASGIVVTLPED---ILFDFDKADLRPSAQVALQKMAQVIN 137

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
                 I I GHTD+   +     N  LS  RA +    L  +  V+  R++   G    
Sbjct: 138 FYKNAPIEISGHTDS---KGADGYNRSLSERRAEAVRSYLANNFSVTTGRLTA-RGLGEG 193

Query: 319 RLKIASD--------PMNSANRRIDILVEDRQG 343
           +    +              NRR++IL++++ G
Sbjct: 194 KPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPG 226


>gi|326772523|ref|ZP_08231807.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
 gi|326637155|gb|EGE38057.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
          Length = 417

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
                G +I++ D     +FD  SS    E    L  +  V+  S      I+GHTD+  
Sbjct: 293 PVQSCGTVITLEDS---VLFDFGSSELRGEASTTLTNLATVIKDSKAPKVQIQGHTDSV- 348

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328
             +    N +LS  RA +    L   GV+ D   +  G+   +    ++           
Sbjct: 349 --SDDAFNQKLSEQRAQAVSSALKSDGVAAD--LEAVGYGETKPVAPNENPDGSDNPAGR 404

Query: 329 SANRRIDILV 338
             NRR+++ V
Sbjct: 405 RLNRRVEVFV 414


>gi|239814628|ref|YP_002943538.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239801205|gb|ACS18272.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 217

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  PE    L  +   +      + I  GHTD+         N RLS+ RA +    L+ 
Sbjct: 116 VLKPEGRAKLTDLVSKIRDVNLEVIIAVGHTDSI---GSDAYNQRLSVRRAEAVKAFLVS 172

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            G+  +R+    G    +    +      + NRR++I V   +
Sbjct: 173 KGIERNRVYT-EGKGEKQPVADNRTKEGRAKNRRVEIEVVGTR 214


>gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223]
          Length = 369

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L      I        A      V          +   +   +  F   S++  P     
Sbjct: 213 LDSDNDGIYDDKDQCPATPATHKVDSVGCTIYENVKTKEDVGSIQFANDSAVVKPVFYKD 272

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
           ++++   L  + E    I GH            N  LS  RA +  ++L+ K G+S+ R+
Sbjct: 273 IERLANYLNKNPEFTVEIAGHASHV---GKPEYNMVLSDKRAAAVAKILVDKYGISQSRV 329

Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           +   G+   +  +A D     +ANRRI+ +V 
Sbjct: 330 TS-KGYGETQPLVAGDSKEAYAANRRIEAVVT 360


>gi|59713511|ref|YP_206286.1| outer membrane lipoprotein [Vibrio fischeri ES114]
 gi|197337177|ref|YP_002157921.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
 gi|59481759|gb|AAW87398.1| predicted outer membrane lipoprotein [Vibrio fischeri ES114]
 gi|197314429|gb|ACH63878.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
          Length = 222

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L  +    GV  E      L  ++D      F  SS          L  +  +L
Sbjct: 83  DQQEKALRNELKSSGVQVERVGKNELKLVMDNGIG--FQSSSYQLDASIYNTLNGVARIL 140

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +    I GHTD+      A  N  LS  RA S    L+K  V+  R++   G+   
Sbjct: 141 VEYPDTALQIDGHTDS---SGNATKNQTLSEQRADSVRTYLIKQDVAAGRVNA-RGYGAR 196

Query: 319 RLKIASDP--MNSANRRIDILVE 339
                +      + NRR++I + 
Sbjct: 197 YPVCDNSTKQGRACNRRVEITIL 219


>gi|332521405|ref|ZP_08397859.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332042804|gb|EGI79003.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 646

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 11/140 (7%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
           +   +    +   T +++      N   FD   S   P+    L+ I  V+     + I 
Sbjct: 506 EVNAEETQVDLFLTPLIVDSEIVINPIFFDYDKSNIRPDAAYELENIVVVMREHPNMVIK 565

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323
           I  HTD+       + N +LS  RA S    L   G+++DRI    G+   +L       
Sbjct: 566 IESHTDSR---GRDKYNEKLSDRRAKSTRDYLFSRGIAKDRIESAIGYGESQLLNKCSNG 622

Query: 324 ---SDPMNSANRRIDILVED 340
              S+  +  NRR   ++  
Sbjct: 623 VKCSEEEHQKNRRSKFIITS 642


>gi|89902522|ref|YP_524993.1| Type I secretion outer membrane protein TolC [Rhodoferax
           ferrireducens T118]
 gi|89347259|gb|ABD71462.1| Type I secretion outer membrane protein, TolC [Rhodoferax
           ferrireducens T118]
          Length = 609

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 22/208 (10%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              + ++        +T      +D+    D  +  +  +   L PL +  +  + + K 
Sbjct: 411 QVAAQARTLAGMGQLVTALGVNREDMPSLQDAGQDRSGIDPAELCPLEESMVDTLDKIKA 470

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                         ++                  +S+       +FD   S    E +  
Sbjct: 471 ------------ETVIPSRARAVAPVVQKPAPTKVSLSADT---LFDSGKSNLKAEGLRS 515

Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  +   +      + I  GHTD+         N RLSL RA S    L+  GV   R+ 
Sbjct: 516 LDSLLARIKGVQLDVVIAVGHTDSV---GSEEFNNRLSLARAESVRAYLVGKGVDVKRVR 572

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDI 336
            + G    +    +      + NRR+D+
Sbjct: 573 AV-GKGESQPIADNATEAGHAKNRRVDV 599


>gi|323491313|ref|ZP_08096498.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
 gi|323314439|gb|EGA67518.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
          Length = 222

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 14/217 (6%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+ +     C+ +  +++  G+    S      I       +   + +     ++   +
Sbjct: 7   ALAVAIALSGCQATQRQNATTGETETNSATQGALIGAIAGAAVGLATGDDAKERRKHALI 66

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSIPL 245
                       G   D     +  +   +G+ +  + +    +       F  SS    
Sbjct: 67  GAAGGAAVGGGVGYYFDQQEAALRKQLLNSGVQVERVGENQLLLRLENGIGFQSSSYQLD 126

Query: 246 PETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 L+ + ++L    +   +  GHTD++        N  LS  RA S    L+  GV
Sbjct: 127 SSIHNTLRGVAQILVEYPDTSLVIDGHTDST---GSDTTNQVLSERRAESVRSYLVSQGV 183

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  R     G         +        NRR++I + 
Sbjct: 184 AAGRAIA-RGNGERYPLCTNSTTEGRACNRRVEIQIL 219


>gi|124004618|ref|ZP_01689462.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123989741|gb|EAY29270.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 247

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 7/176 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +I ++E   +   +   ++       + +   K              +       +  + 
Sbjct: 74  AITEKEGKEIKRDTVSIVILDDDADGVPNFEDKCPKKKGSYANKGCPENSTPPVLKNSLS 133

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
            ++       +F   S      T   L  I ++L    +  + I GHTD+       + N
Sbjct: 134 QALAKYTKGLLFPSGSPQINSGTYTQLNAIVKLLKKYPKARLLIEGHTDSV---GNTQKN 190

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LSL RA       ++ G++  R+  + G        ++D     S NRRI++ +
Sbjct: 191 KALSLKRASFVQAYFVRQGIAAHRLK-VIGKGATTPIASNDTAVGRSKNRRIEVRL 245


>gi|88800186|ref|ZP_01115754.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
 gi|88777032|gb|EAR08239.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
          Length = 188

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 8/167 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                           + +  L  +       LV +++    + E     +   ++D   
Sbjct: 25  TDDTDQGSTTTTEPAVEEVDTLELETDDESIELVVEDVEPVAVIEDAAEDVYNELLD-LT 83

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              FD   S+  PE I +L    E L  +   + +  GH D          N  L   RA
Sbjct: 84  LVYFDFDKSVIRPEFIDMLNAHSEFLVANPTQMVVLEGHADER---GTREYNLALGERRA 140

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
                 LM  GVS  +I  +S +   +           S NRR++I+
Sbjct: 141 KQVATYLMVQGVSAAQIDTVS-YGEEKPLAIGKTEAEYSQNRRVEIV 186


>gi|171315886|ref|ZP_02905116.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171098982|gb|EDT43770.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 220

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++        L K+           + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTSAANAALDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 171 ADAVAAYLREHGLKADSF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 220


>gi|262193395|ref|YP_003264604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262076742|gb|ACY12711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 458

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 13/252 (5%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
              +     +        ++  +    +        +          + +       RD 
Sbjct: 196 GPGEPAAPRTRRAEPVPYALASEPVDEDDDGVPDFSDACPSEPELYNRMDDEDGCPERDP 255

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           +       + +  +     E +       +            D     + T +G   ++ 
Sbjct: 256 DGDGLFGAADECPEEAEDFEGFEDEDGCPDVDNDGDGNPDSADECPNRAETDNGFEDEDG 315

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTE-VISIR 269
               +       I +          F   S+      +  +L  +   LA      + I 
Sbjct: 316 CPDEVPTRVAEYIGV-----LEGIRFPSGSAKIRDRRSRRILGDVAATLAEYPSVRVRIS 370

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           GHTD       A  N +LS +RA +    L+  G+   RI    G+   R    +     
Sbjct: 371 GHTDDR---GRAEKNVQLSRERADAVKWFLVDKGIEHTRIVTA-GYGPERPLADNGTRAG 426

Query: 328 NSANRRIDILVE 339
            + NRRI+  + 
Sbjct: 427 RAKNRRIEFELL 438


>gi|261856894|ref|YP_003264177.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261837363|gb|ACX97130.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 331

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 8/213 (3%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
               +   Q  H        S           +   +          +    ++  +   
Sbjct: 123 WELANQGLQPLHGFAGHIGTSNYAIGAAGMDGVFHELTAHLQRPQGNVDLMLMVIDRDSA 182

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +           + G         V  +    G+  +         F   S+     +  
Sbjct: 183 QGLQAPAVYLKLIEGQPMKTGEVTVTAKAISNGLAQNGHIALYGIHFATDSAALEASSDK 242

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308
            L ++ ++L       + I GHTD +        N +LS DRA +  + L+ + G+S +R
Sbjct: 243 ELGEMAKMLKQEPSAHVYIVGHTDDT---GALPHNLKLSRDRADAVVKALITRYGISSNR 299

Query: 309 ISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +    G A      ++  D   + NRR++I+++
Sbjct: 300 LVA-EGVASFAPVASNASDQGRALNRRVEIVLQ 331


>gi|260061280|ref|YP_003194360.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88785412|gb|EAR16581.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 832

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 89/286 (31%), Gaps = 19/286 (6%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLS-IDEHITKNS--VDLKIGSTNQKKQYQRL 127
              +       G  + +N  +  +  K D S I +  T+       ++G       Y   
Sbjct: 549 DIFQVSFDEEIGFLEVENLGQPINSKKDDFSYIVDEATQKGFFASNRVGGKGDDDLYSFQ 608

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
                  + +  +    + +T D+     +       + + +           + + +  
Sbjct: 609 RLLPEETNENAIAGVVTDLVTGDAIPEALVTLLDANNRKLKEIVTEADGSFVFQDLDSNT 668

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSS 242
           R + L + A            DN    V     +    I + D     +     F+    
Sbjct: 669 RYRILVEKATYSEQQEEVATRDNEQVDVELPMRKLQERIVVEDGVRKLKTGPIYFNFDKH 728

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
               +    L K+  V+     ++  I  HTD+      +  N  LS  RA S    L++
Sbjct: 729 NIRSDAAEELDKLVAVMQEYPSMVIAIESHTDSR---GSSVYNRYLSDLRAKSTRAYLIE 785

Query: 302 SGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILVED 340
           +G+   RI    G+   RL    D         +  NRR + +V D
Sbjct: 786 NGIDPSRIQSAKGYGEDRLLNDCDGSVRCTSQQHQLNRRSEFIVVD 831


>gi|307824145|ref|ZP_07654372.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307734929|gb|EFO05779.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 396

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   P+    L     V+  +    I ++GHT ++        N RLS  RA + 
Sbjct: 293 FDNDKSNIKPQYYRELDNAVTVINQNPGVNIEVQGHTSST---GTVEYNQRLSERRALAV 349

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L        R     G+   +    ++       NRR+ + V  
Sbjct: 350 KNYLSSKSAHAGRTLTARGYGLTQPIDTNETEEGRANNRRVQLEVLQ 396


>gi|289678953|ref|ZP_06499843.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
           FF5]
          Length = 234

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 5/181 (2%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           ++  + +      E+     +         E+  A   +     L               
Sbjct: 57  NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
               +        I I +       +F    ++P  +   +++K+  ++      I + G
Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173

Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
            TD  P        NW LS  R+ S  ++L   GV+  R++ + G+   +  + +     
Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232

Query: 330 A 330
            
Sbjct: 233 R 233



 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +++   +   +    W + YADF+T+L AFF+VM+ I++ ++   K + Q       +
Sbjct: 1   MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
                K       P     Q  + +   E + K+S     G         +        +
Sbjct: 59  TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
                +  + ++  +    +    S+ L  S +   +     + ++    +KR      +
Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246
                              +    + + + +  +D  N             P
Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223


>gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 457

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 76/240 (31%), Gaps = 12/240 (5%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           T   ++  I   + + QY+     +        +         D     D        ++
Sbjct: 217 TDLKIEFDIDKADIRPQYKDEVKRVADYMKQYPNTTAVIEGYTDDVGSDDYNMKLSQRRA 276

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
                +           L+ K   + Q L    +          I   +        ++ 
Sbjct: 277 EAVVNSLVDDFGIDRSRLSAKGYGKTQPLTSNATEAGKQ-KNRRIQAVIDCTLEDPKVIA 335

Query: 227 SIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
            + D+    +   FD       P+    + K+GE +  +    ++  GHTD         
Sbjct: 336 KLPDRLCVSLNIQFDTDKYTIKPQYHDEIAKVGEFMKQNPTTTAVIEGHTDRV---GSYD 392

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            N +LSL RA S    L    G+   R+S   G+ + R    +      + NRRI+ +++
Sbjct: 393 YNMKLSLRRAESVVTYLADKFGIERSRLSA-KGYGYTRPIGYNSDPKGRAMNRRINAIID 451


>gi|319794434|ref|YP_004156074.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315596897|gb|ADU37963.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 331

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD    +  PE+   L ++ +++ ++    +S+ GHTDA      A+ N  LS  RA +
Sbjct: 229 LFDLDKDVIRPESQPTLDEMTKLMRNNPPLKLSVVGHTDAQ---GEAKHNDDLSKRRAVA 285

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
              VL+K+GV   R +   G         +D     + NRR++++
Sbjct: 286 VIGVLVKAGVDPRRFTT-RGAGAAEPVAPNDNEAGRAKNRRVELV 329


>gi|150007641|ref|YP_001302384.1| outer membrane lipoprotein [Parabacteroides distasonis ATCC 8503]
 gi|149936065|gb|ABR42762.1| outer membrane protein, putative OmpA domain protein
           [Parabacteroides distasonis ATCC 8503]
          Length = 445

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   PE++  + +I +++  + +   S+ GHTD++        N  LS  R+ + 
Sbjct: 344 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 400

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
              L++ G+S DR+S  SG         +  D   + NRR++ +
Sbjct: 401 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 443


>gi|119504265|ref|ZP_01626345.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
           HTCC2080]
 gi|119459773|gb|EAW40868.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
           HTCC2080]
          Length = 182

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  SS       + +     VL  + + + + GHTD          N  L   RA +  
Sbjct: 84  FDFDSSSMTDTARMAVDAHIAVLLSNDDSVRLEGHTDER---GTREYNLALGERRANAVR 140

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             ++ +GV   RI  IS +         +S+   S NRR+++
Sbjct: 141 DYMVANGVPSYRIESIS-YGEENPVAFGSSEANWSQNRRVEL 181


>gi|116694470|ref|YP_728681.1| hypothetical protein H16_B0519 [Ralstonia eutropha H16]
 gi|113528969|emb|CAJ95316.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 215

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 24/177 (13%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +      L  E     +  +R + L K +++ L+      +   +             
Sbjct: 39  GVQMELSARLEAEVKQRQEEAQRRETLEKALAAPLAAGRVTLVNGRIGI----------- 87

Query: 229 IDQRNTPMFDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPFRN---IA 281
                  +F  +S    PE   +L    Q +   L    E++ + G TD    R      
Sbjct: 88  ---SGNVLFALNSDQLQPEGRDLLKSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRF 144

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            DNW LS  RA +  + L+ +G+    +   + F   +    +      + NRR++I
Sbjct: 145 ADNWELSAQRALTVTRTLIDAGIPPTSVFSAA-FGSQQPVTPNADAEGRAKNRRVEI 200


>gi|256422985|ref|YP_003123638.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256037893|gb|ACU61437.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 1026

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237  FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
            F  + +     ++  L K+  +L    E   +  GHTD          N  LS  R+ + 
Sbjct: 920  FASAKAEIAVSSLPSLDKMAALLQAHREWQLLLSGHTDNE---GTETFNQTLSEKRSEAV 976

Query: 296  YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             Q L+  GV  +RI+   G+   +    +        NRR+++ +
Sbjct: 977  RQYLVTKGVDAERITT-KGYGQSKPLTTNSSEAGRGKNRRVEMEI 1020


>gi|256820420|ref|YP_003141699.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582003|gb|ACU93138.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 290

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + V  +  +  + I+I D+    +F   S         
Sbjct: 117 RRDSINLALVQSLKGVLGNLDDQDVDIKVEKGVVFINISDKM---LFSSGSYTISKNAKS 173

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSED 307
           VL+K+ +V+ +  +    + GHTD    +    RDNW LS+ RA    +VL K  GV+ +
Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G +++    ++      + NRR  I++  +
Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVILPK 268


>gi|146298022|ref|YP_001192613.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146152440|gb|ABQ03294.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 231

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I +    N+  FD + S   P     L K+  V     +  I I G+TD +        N
Sbjct: 104 IHLTLNENSVRFDTNKSTLTPTAKANLDKLVPVFNEYGDTDIQIFGYTDNT---GKPEYN 160

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             LS  RA S    L+  G+   R    SG         +D     + NRR++  +  
Sbjct: 161 LTLSGQRAASVQAYLVSKGLKSSRFKT-SGLGIADPIATNDTPEGRAQNRRVEFSITA 217


>gi|255013830|ref|ZP_05285956.1| outer membrane lipoprotein [Bacteroides sp. 2_1_7]
          Length = 435

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   PE++  + +I +++  + +   S+ GHTD++        N  LS  R+ + 
Sbjct: 334 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 390

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
              L++ G+S DR+S  SG         +  D   + NRR++ +
Sbjct: 391 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 433


>gi|332880160|ref|ZP_08447842.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681919|gb|EGJ54834.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 242

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARD-----N 284
            +  +F+ SSS         L K    + +  + + +   G+TD   ++N         N
Sbjct: 111 DSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKN 170

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             LSL RA S    L + GVS  +I+ + G         +        NRR+++ +   +
Sbjct: 171 MDLSLQRANSVSNYLKQCGVSPTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASE 230


>gi|171322789|ref|ZP_02911520.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171091861|gb|EDT37347.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 230

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   P     L ++           +++ G+TD+         N  LS  RA + 
Sbjct: 125 FDTDRADLTPIARDRLDRLISASRGVRVRTVTVNGYTDSV---GSDDYNVGLSERRASAV 181

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              L   G+S  R     G+       +++     + NRR+++ ++  +
Sbjct: 182 DAYLQSHGLSAGRFV-GRGYGKADPVDSNETAVGRARNRRVEVRLDVDR 229


>gi|319426588|gb|ADV54662.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 288

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           S    + +   D++      + + +        +S ++++        ++ +  + L   
Sbjct: 32  SSAPKMAEGISDIRTELNTLQAKNELAILAPAAISQAEEAVRAAEQPVKNEQLSQHLVFV 91

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D + +I   +        ++K+LA  R     D     ++                   
Sbjct: 92  ADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQE 151

Query: 221 RTGILISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
                  +                   +FD   +     T   L  +   L    +    
Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLATFLGKYPQRGAI 211

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I G+TD+         N  LS  RA S    L   GV   R+S   G         ++  
Sbjct: 212 IEGYTDSV---GTEEYNLGLSERRADSVSNFLQAQGVQSSRLSS-QGKGESFPVANNESA 267

Query: 328 --NSANRRIDILVED 340
                NRR+++++ +
Sbjct: 268 SGRQQNRRVEVIITN 282


>gi|300694450|ref|YP_003750423.1| transmembrane protein, ompa/motb motif [Ralstonia solanacearum
           PSI07]
 gi|299076487|emb|CBJ35807.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
           solanacearum PSI07]
          Length = 215

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS +    +K+++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSKLADEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGRELLKSLAGPLSAYLKSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNTDDEGRAKNRRVEI 200


>gi|254516702|ref|ZP_05128761.1| OmpA/MotB [gamma proteobacterium NOR5-3]
 gi|219675125|gb|EED31492.1| OmpA/MotB [gamma proteobacterium NOR5-3]
          Length = 177

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   P     +     +L  +   + + GHTD          N  L   RA +  
Sbjct: 79  FEFDSSTLTPAAQAAVDAHIALLKTNDRSVRLDGHTDER---GTRDYNMALGERRANAVR 135

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             ++ +GV+  RI  +S +   +     + +   S NRR+++
Sbjct: 136 DYMVVNGVASYRIETVS-YGEEQPVAYGSGESSWSQNRRVEL 176


>gi|332715427|ref|YP_004442893.1| OmpA-like porin [Agrobacterium sp. H13-3]
 gi|325062112|gb|ADY65802.1| OmpA-like porin [Agrobacterium sp. H13-3]
          Length = 503

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 8/144 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   ++ L  +   K V        + + I    N+ +F   S+   P+   ++Q+IG  
Sbjct: 335 LEKLMAFLQPEVDRKLVTLADVNGRLRVRIN---NSGLFTTGSADVSPQFRDLIQRIGGA 391

Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           LA       + G+TD  P + +    NW LS  RA +   +L +    E  ++   G A 
Sbjct: 392 LAAEKFRAVVIGYTDTVPIKTVEFPSNWHLSEARAKAVGDILSQFTGPEAILT--EGRAD 449

Query: 318 HRLKIASDPMNSA--NRRIDILVE 339
                 +        NRR +I+V 
Sbjct: 450 SDPIADNKTEEGRQINRRTEIMVL 473


>gi|288801213|ref|ZP_06406668.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331824|gb|EFC70307.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 225

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 9/150 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  V    ++ V        + ++     +  +F  + ++    +   L K 
Sbjct: 70  MDKVAQETAAKVKSAKIEEVTDANGLKAVKVTF---DSGILFSTNKAVLSQTSKNDLAKF 126

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +L  + +  + I GHTD++        N  LS  RA S    L   GV+  +   + G
Sbjct: 127 ATILKENRDCHVDIYGHTDST---GNDGINIPLSNSRARSVVNYLESCGVTGSQFKNVQG 183

Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342
                   ++        NRR+++ +   Q
Sbjct: 184 KGSSEPVASNSTASGRQQNRRVEVYLYASQ 213


>gi|325983492|ref|YP_004295894.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325533011|gb|ADZ27732.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 227

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 11/150 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           +++      +       GV         + ++I        FD   +   P    +L   
Sbjct: 73  QRMEEQKREMETATAGTGVQVTQTEDNRLKLNIPSD---ISFDTGRADIKPGFRPILDNF 129

Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +    + I GHTD++        N  LS++RA S    L+  GVS  RI +I G
Sbjct: 130 ATTLISNEGTAVKIIGHTDST---GSDAINNPLSVNRAASTRDYLVSRGVSIKRI-QIDG 185

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                    +D     + NRR++I V + Q
Sbjct: 186 RGSREPMAENDTPENRAENRRVEIFVTETQ 215


>gi|27804808|gb|AAO22853.1| outer membrane protein A-like protein [Myxococcus xanthus]
          Length = 241

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 8/227 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                Q                    S    ++      + TD +   N ++        
Sbjct: 10  GPAARQGCPIPDQDGDEVPDEIDSCPSDPGPADNRGCPVRDTDGDGIDNDKDECPNEAGP 69

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            E+    +       +  +  S ++       +   L       I    +       F+ 
Sbjct: 70  IERNGCPESDTDKDGVPNRADSCVNEPGDAKNLGCPLHILPLVEIRPDRLVVMGKVFFEP 129

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           + +     +  +L  +  V+    E+  + +  HTD         DN RLS  RA +  Q
Sbjct: 130 TQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDR---GFPDDNRRLSQGRAEAVRQ 186

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            L+   ++ +R+  + G+   R   ++   N    NRR++ L+ D Q
Sbjct: 187 YLIGRDIAPERLKAL-GYGQERPIDSNATSNGRENNRRVEFLLADPQ 232


>gi|332519368|ref|ZP_08395835.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045216|gb|EGI81409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 370

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F+   +I +  +I  L K+   L  +    I I GHTD      +A+ N  LSL R
Sbjct: 262 KNILFEFDKAILVNTSIEELDKLNLHLKENKNLNIEIYGHTDNI---GLAKRNQELSLQR 318

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           A S  + L+  G+ ++RI    GF   +  + +      + NRR++  + D+ 
Sbjct: 319 AKSVSEYLISKGLKKERIQWF-GFGSSKPLVKNSSEDNRAKNRRVEFKLIDKN 370


>gi|86750700|ref|YP_487196.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86573728|gb|ABD08285.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 451

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + S+     ++ VL+++ EV+AH     I + GHTDA         N  LS  RA + 
Sbjct: 350 FMRGSAEIAQASLPVLKQLAEVIAHCPAATIEVAGHTDA---AGKKAANEALSKRRAEAV 406

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
              L K+G+   +++ + G+   +   A+D     + NRRI+ +V+
Sbjct: 407 ADNLTKAGIGSAKLTAV-GYGASKPLAANDSADGRAKNRRIEFVVK 451


>gi|120599047|ref|YP_963621.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|146292882|ref|YP_001183306.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120559140|gb|ABM25067.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
 gi|145564572|gb|ABP75507.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 288

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 74/255 (29%), Gaps = 19/255 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           S    + +   D++      +   +        +S ++++        ++ +  + L   
Sbjct: 32  SSAPKMAEGISDIRTELNTLQANNELAILAPAAISQAEEAVRAAEQPVKNEQLSQHLVFV 91

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D + +I   +        ++K+LA  R     D     ++                   
Sbjct: 92  ADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQE 151

Query: 221 RTGILISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
                  +                   +FD   +     T   L  +   L    +    
Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGAI 211

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I G+TD+         N  LS  RA S    L   GV   R+S   G         ++  
Sbjct: 212 IEGYTDSV---GTEEYNLGLSERRADSVSNFLQAQGVQSSRLSS-QGKGESFPVANNESA 267

Query: 328 --NSANRRIDILVED 340
                NRR+++++ +
Sbjct: 268 SGRQQNRRVEVIITN 282


>gi|283853198|ref|ZP_06370451.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283571456|gb|EFC19463.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 245

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 9/200 (4%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
            + + S+    +  +   +    +        +S     A  +++ + +  +   +  S 
Sbjct: 46  DVKKFSDSFDSVQNALGSKGKSKQAAPVSGQEMSALVEQARIKQRIIGEQRRVFENFRSF 105

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
           +    +   +        I IS+       +F K       E  V L+ + E L   + E
Sbjct: 106 VSQKGLEGVLGATLESGTITISL---PTGVLFPKDGVDLTDEGKVRLRTLHEFLIKTAGE 162

Query: 265 VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            I+IRG TD  P    +  RDNW +S  RA +  + ++  G++ +R++  +G A      
Sbjct: 163 RINIRGFTDDLPPAAGSRFRDNWEVSSLRAVAVLRYMLSLGMAPNRLTA-TGLADLEPLY 221

Query: 323 ASDPM--NSANRRIDILVED 340
            +      + N+R++ ++E 
Sbjct: 222 PNTTPEHRARNQRVEFVLER 241



 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
          D       W    AD   +LM FF++++ ++  D          F+     L +  K 
Sbjct: 13 DEAEAPSEWLTTLADMSMLLMTFFILLFSMSTLDVKKF---SDSFDSVQNALGSKGKS 67


>gi|91787475|ref|YP_548427.1| OmpA/MotB [Polaromonas sp. JS666]
 gi|91696700|gb|ABE43529.1| OmpA/MotB [Polaromonas sp. JS666]
          Length = 227

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   +   P    +L +    L  +    ++I GHTD++        N  LS
Sbjct: 113 DIPSDVSFDVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDST---GSDAINNPLS 169

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +DRA +A   L+  GV+  RI    G         ++       NRR++I V
Sbjct: 170 VDRANAARDYLVSRGVARTRI-ATDGRGSREPVADNNTQQGRDKNRRVEIYV 220


>gi|213961761|ref|ZP_03390027.1| OmpA family protein [Capnocytophaga sputigena Capno]
 gi|213955550|gb|EEB66866.1| OmpA family protein [Capnocytophaga sputigena Capno]
          Length = 290

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + V  +  +  + I+I D+    +F   S         
Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDVKVEKGVVFINISDKM---LFSSGSYTISKNAKS 173

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
           VL+K+ +V+ +  +    + GHTD    +    RDNW LS+ RA    +VL K  GV+ +
Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTGCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G +++    ++      + NRR  I+V  +
Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVVLPK 268


>gi|330959642|gb|EGH59902.1| hypothetical protein PMA4326_13904 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 220

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 13/155 (8%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +   + K+   L     D           +   + +  D      F   S+   P     
Sbjct: 76  MDKRSAKLKEELRQKGMDATTSLDPVTGRQMMTVQAPSD----IAFATGSADLQPAAFQG 131

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L  +   L    + +++I GHTD++      + N  LS  RA +  Q L  +GV   ++ 
Sbjct: 132 LSAVANALKDQKDLMLNITGHTDST---GSRQFNNLLSYARAQAVAQYLYAAGVPA-QVI 187

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            + G                + NRR++I +  +QG
Sbjct: 188 AVRGVGPSMPVATDATSQGRAQNRRVEIQI--KQG 220


>gi|260768688|ref|ZP_05877622.1| outer membrane protein [Vibrio furnissii CIP 102972]
 gi|260616718|gb|EEX41903.1| outer membrane protein [Vibrio furnissii CIP 102972]
          Length = 229

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + +Q+          +S     L  +           +       +  I A         
Sbjct: 25  AATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKERRQRALIGAAGGAAVGGG 84

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L+  +  +N   F  +S          L+ 
Sbjct: 85  VGYYFDQQEAALRQELLNSGVQVERVGENQLVLRM--QNGIGFQTNSYQLDSSIHNTLRG 142

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + ++L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     
Sbjct: 143 VAKILVEYPDTSLVIDGHTDST---GSDTTNQILSERRAESVRSFLLSQGVAAGRAIA-R 198

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G         +   +    NRR++I + 
Sbjct: 199 GNGERYPLCTNSTADGRSCNRRVEIQIL 226


>gi|37528060|ref|NP_931405.1| hypothetical protein plu4224 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787497|emb|CAE16596.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 558

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +FD   S   PE   VL      +    E + +  GHTD++     A  N  LSL R
Sbjct: 439 SMSLFDVGQSRLKPEAAKVLVNALIEIKAKPEWMVVITGHTDST---GDAVKNRELSLAR 495

Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +     L  S VS      + G    +    +      + NRR++I +   
Sbjct: 496 AKAVRDWILQTSDVSPTCFV-VKGEGATQPIATNTTAVGRAVNRRVEISLMPP 547


>gi|2062640|gb|AAC35418.1| CadF precursor [Campylobacter coli]
          Length = 326

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 223 FGFDKVDINPAFEEKIKEIAQLLDENARYDTILEGHTDNI---GSRAYNQKLSERRAESV 279

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            + L K GV +DRI  + G+   + +  ++       NRR+D
Sbjct: 280 AKELEKFGVDKDRIQTV-GYGQDKPRSRNETKEGRADNRRVD 320


>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
           3TCK]
 gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
           3TCK]
          Length = 327

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     + I  LQ I + L +  E  + + GHTD+         N  LS +RA   
Sbjct: 218 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSR---GAEAYNQNLSEERAAVV 274

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L    G+ + RI    G        A+D     + NRR+++ 
Sbjct: 275 AGYLATHFGIEQSRIQA-QGRGELEPVAANDTEDGRAQNRRVEVF 318


>gi|320536711|ref|ZP_08036721.1| OmpA family protein [Treponema phagedenis F0421]
 gi|320146448|gb|EFW38054.1| OmpA family protein [Treponema phagedenis F0421]
          Length = 412

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 10/168 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ E   + +  +  +     ++  L+  + +  ++      T  GI ISI        
Sbjct: 252 TLTYEGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISI----ENIQ 307

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+  L      LQKIG +L    +  + I GHT     R  A +  +LS +RA S 
Sbjct: 308 FEADSARLLSSEKEKLQKIGRLLQGFPDKELLISGHT---ALRGTAAERQKLSEERADSV 364

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
            + L + G+ + +     GF   R      ++   + NRR++I + ++
Sbjct: 365 ARYLEEIGIRDTQHLYTRGFGARRPLAPNTNEENRARNRRVEITILEK 412


>gi|325272915|ref|ZP_08139241.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
 gi|324101950|gb|EGB99470.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
          Length = 145

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
                F   S+   P     L  +       +   I + G TD++      + N  LS  
Sbjct: 21  PGNITFATDSANIAPSFYQPLNNLASSFKQFNQNTIEVVGFTDST---GSRQHNMDLSQR 77

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA +    L   GV   R+  + G    +   ++      + NRR+++ ++
Sbjct: 78  RAQAVSTYLTSQGVDSSRL-SVRGMGPDQPIASNADANGRAQNRRVEVNLK 127


>gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 631

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F+ +    LP ++  L  + ++L ++    I I+GHTD        + N RLSL R
Sbjct: 524 KNIFFNTNEYTLLPASLTELNTLQQLLKNNASLCIEIQGHTDNV---GNDQQNERLSLQR 580

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A + Y  L++  +   R+    G+  ++   A+D       NRR   ++  
Sbjct: 581 AKAVYDYLVQEKIEPQRL-TFKGYGENKPIAANDTDAHRRQNRRTSFIITK 630


>gi|309789304|ref|ZP_07683895.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
 gi|308922839|gb|EFP68355.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
          Length = 137

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAY 293
           MF   S+   P    +L+ I  VL      IS+ GHTD  P+ +      NW LS DRA 
Sbjct: 1   MFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRAN 60

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           ++ + LM  G+   ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 61  ASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 109


>gi|32265934|ref|NP_859966.1| hypothetical protein HH0435 [Helicobacter hepaticus ATCC 51449]
 gi|4809140|gb|AAD30109.1|AF134212_1 membrane-associated protein map18 [Helicobacter hepaticus]
 gi|32261983|gb|AAP77032.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 153

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 6/106 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            +FD        +    ++K    L  +   + + GHTD+         N+ L   RA +
Sbjct: 50  VLFDFDKYDIRSDMEDRVEKSAAALKSTGAKVVLEGHTDSY---GSDAYNYALGTKRANA 106

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
               L   GV+  +I  +S +   +    SD       NRR++  +
Sbjct: 107 VKNALTTRGVNASQIKTVS-YGESKPTCTSDTPECNQENRRVEFKL 151


>gi|317051743|ref|YP_004112859.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
           S5]
 gi|316946827|gb|ADU66303.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
           S5]
          Length = 187

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   P+   VL      L ++     +  GH D       +  N  L   RA S 
Sbjct: 85  FDFDRSSIRPDARKVLDNNIAYLKNNPNARIVIEGHCDER---GSSDYNLALGDRRAQSV 141

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
              L+  G+   R++ IS +   R      ++     NRR + +
Sbjct: 142 KDYLVTGGIDASRLTTIS-YGKERPVDPRSNEWAWQKNRRGEFV 184


>gi|170703211|ref|ZP_02894016.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170131877|gb|EDT00400.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 214

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +L+     +   L    E++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPEGRDLLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRKFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|86609769|ref|YP_478531.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558311|gb|ABD03268.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 243

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 13/232 (5%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            +     Q       I       Q+     S T D++  ++    TDLE  I +     +
Sbjct: 14  ETNISPTQPASPTPPILPTLAPPQANPPVASPTADADPEENHESPTDLEAEIREIRQQVI 73

Query: 176 PPLSKEKILAMKRK----KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
             L + + L  + +    +   +  ++ S+    +  +          T   +    I  
Sbjct: 74  QLLIRIEELESRLQRLRSQTAPEPVRESSTAAEIVPGEESTPAPTKTLTSFQVGTQTISL 133

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
               +FD   +   PE   +L ++ + L       + + GHTD          N  LSL 
Sbjct: 134 PGDLLFDFDKAEIRPEAASLLAQVAKSLEAMPGARVQVNGHTDNI---GPLNYNLALSLR 190

Query: 291 RAYSAYQVLMKSGVSEDRISK--ISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +    L K  + E        SGF        +D       NRR+D+++
Sbjct: 191 RANAVKDYLTKL-LPEGHPISWTTSGFGPTLPVADNDTEAGRQRNRRVDLVI 241


>gi|146276274|ref|YP_001166433.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554515|gb|ABP69128.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 642

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278
                 I  +       F+  S+   P     L  + EV      + + I GHTD+    
Sbjct: 482 QECMTRIRRVLAGQKITFEPGSAEIDPSARGTLDGLAEVFKDCKGMPLEISGHTDSQ--- 538

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L    V   R+  + G+   R    +        NRRI+ 
Sbjct: 539 GSEGGNKALSQARAEAVLMALQGRRVDVGRMKAV-GYGEERPIADNRDEAGREANRRIEF 597

Query: 337 LVEDRQG 343
            +    G
Sbjct: 598 TLLGDDG 604


>gi|86141296|ref|ZP_01059842.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85831855|gb|EAQ50310.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 640

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 93/287 (32%), Gaps = 19/287 (6%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
            +        NL        D+    E    NK   S D    K   D+   + N  K  
Sbjct: 363 FKDGIYGTPINLGPVMNTNSDDFAYLEGDEPNKGFFSSDRPGGKGGDDIYAFNYNLAKCV 422

Query: 125 QRLENNIFYLSNSQQSEHCKNSL-TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
           Q +   ++ L   +  +  K ++   D ++   +    D   S+           +++  
Sbjct: 423 QYISGTVYDLETKEPIKGAKVTVFDEDGKEYARIETGDDGSYSVELLCESTYTIEARKAG 482

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            +  +     D+       +      ++ +  + +     I I      +   F+     
Sbjct: 483 YSEDQLDFETDVLPDRKMNMVDFRLKDLSEIFVTDGDIEKIRI------DPIYFEYYRYN 536

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                 + L+++ EV+    E+I  I  HTD          N  LS +RA S    L+++
Sbjct: 537 ITDVAAIQLRRVIEVMDAYPEMIIKIESHTDQR---GTDYFNKTLSTNRANSTKDWLIEN 593

Query: 303 GVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           G+   RI    G+   +     D           S NRR + +V  R
Sbjct: 594 GIDPSRIQSAIGYGESQPINICDEEGKTCTELEYSENRRSEFIVVSR 640


>gi|319788654|ref|YP_004148129.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317467166|gb|ADV28898.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 348

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LPE+   + ++ E+L    +  + + GHTD +     A  N RLS  R+ + 
Sbjct: 247 FATDRTEILPESQPQIDQVVELLQQDPQLNLGVEGHTDDT---GDAGHNLRLSEGRSNAV 303

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L+  G+   R++   GF   R    +      + NRR++++
Sbjct: 304 VKALVARGIDAARLTSA-GFGSTRPVADNGSEEGKARNRRVELV 346


>gi|107025501|ref|YP_623012.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116693317|ref|YP_838850.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|170737407|ref|YP_001778667.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|105894875|gb|ABF78039.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116651317|gb|ABK11957.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|169819595|gb|ACA94177.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 221

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           +I  ++     +F    +   P     L ++    A  T   +++ G TD+         
Sbjct: 107 VIERVNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSV---GSDDY 163

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           N  LS  RA S    L   G+  D I  +SG        ++        NRR++I ++
Sbjct: 164 NLALSKRRAESVAAYLKAHGLKTDSI-TVSGRGKADPVASNATPEGRASNRRVEIRLQ 220


>gi|323700140|ref|ZP_08112052.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323460072|gb|EGB15937.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 273

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 17/154 (11%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L  L  +N+ + + F ++R    + I+    + +F        PE    L +   +L 
Sbjct: 86  EPLQSLKWENVSQDINFSSSRF---VQILSINASLLFGPDGYTLSPEGRATLDRFLPLLE 142

Query: 261 HSTEVISIRGHTDASPF-------RNIARDN----WRLSLDRAYSAYQVLMKSGVSEDRI 309
                + + GHT                  N    W+LSL+R  + Y+ L+  G+S D +
Sbjct: 143 QVKYPLLLAGHTSDLRDELGMNYQPGDDSRNPDLSWKLSLNRTLAIYRYLLDKGMSPD-M 201

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            ++ GF  +R     D     + NRR+DI+++ R
Sbjct: 202 LRVEGFGKYRPHYPPDTPENRARNRRVDIVLDKR 235



 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 2/89 (2%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K         +  W + +AD MT+++ FF+++  +   D   K                 
Sbjct: 3   KKKQKRNCEEMPLWMVTFADCMTLMLTFFILLVSMATIDQRRKLVALGSIIGTFGFNQAG 62

Query: 80  --SKGIFDEQNPPERSSQNKIDLSIDEHI 106
             +    D +   E    +  DL   + +
Sbjct: 63  YDTFSQKDTKKTVEPGPIDTGDLEPLQSL 91


>gi|153949077|ref|YP_001403078.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 31758]
 gi|152960572|gb|ABS48033.1| OmpA family protein [Yersinia pseudotuberculosis IP 31758]
          Length = 219

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMSGTGVSVTRQGENIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA +    L+  GV+ +RI +  G  
Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNIVLSQQRADNVASALIVQGVAANRI-RTYGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|329888485|ref|ZP_08267083.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
 gi|328847041|gb|EGF96603.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
          Length = 224

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L A+    GV        +++ +        F  + S   P  + VL  + 
Sbjct: 82  QYMDGQQRALEAELSGTGVGVARQGDNLVLRMPSDVT---FATNQSDLDPRFLPVLDDVA 138

Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL      ++ + GHTD+         N  LS  RA S    L+  GV  +RI  ++G 
Sbjct: 139 RVLNQYDRSMVDVVGHTDS---SGGDAINQPLSERRAASVAAHLINRGVMRERIY-VAGM 194

Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339
           +      ++      + NRR++IL+ 
Sbjct: 195 SARAPIGSNATPEGKAQNRRVEILIR 220


>gi|163732302|ref|ZP_02139748.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
 gi|161394600|gb|EDQ18923.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
          Length = 659

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 83/257 (32%), Gaps = 16/257 (6%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
                     +   +L        +        +   +  + +       +  SE    L
Sbjct: 406 AQQEQISERAQRQTELLNQQVAALRTQLGDLQAVLDDAKERDTAQQVQLQSLGSELNTAL 465

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +    E+   + E      L +EK        RL    K +    S        + VL 
Sbjct: 466 ARVAAEERRRAELEEAERLRLQEEKARLEAEAARLTAETKNLEQYRSEFFGRL--RDVLG 523

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIR 269
                 I        +  +F+ + +    E    + K+  +L+            +I + 
Sbjct: 524 RQEGVRIEGDRFVFSSEVLFEPARADLSAEGQQEIAKVARILSSIADEIPPEIDWIIRVD 583

Query: 270 GHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326
           GHTD  P        DNW LS  RA S  + +++S G+  +R+   +GF   +     + 
Sbjct: 584 GHTDNLPLSGVGQFADNWELSQGRALSVVKYMVESLGIPPNRL-AANGFGEFQPVAVENT 642

Query: 327 --MNSANRRIDILVEDR 341
               + NRRI++   +R
Sbjct: 643 PQARAQNRRIELKFTER 659


>gi|167567883|ref|ZP_02360799.1| hypothetical protein BoklE_35363 [Burkholderia oklahomensis EO147]
          Length = 421

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
            +     V  +       ++        MF   ++        ++ KI   +      ++
Sbjct: 290 NEIAAGTVSVDEDSRHGSVTFRSD---AMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVT 346

Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           + G+TD  P ++     N  LS +RA    Q+L  +GV   R+  + G         +  
Sbjct: 347 VTGYTDNVPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPIGDNGT 405

Query: 327 --MNSANRRIDILV 338
               + NRR+DI V
Sbjct: 406 VQGRALNRRVDITV 419


>gi|124007996|ref|ZP_01692696.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123986580|gb|EAY26379.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 336

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 7/129 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           +  +   T I   +    N   F  SSS     +   L ++   L    +++  + GHTD
Sbjct: 211 IKVDLFVTPIEKGVKILLNNLFFGVSSSKIESTSFDELDRLVRTLNEYPKMVVQLNGHTD 270

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
                  A  N  LS  RA S    L   G++  R+  + GF   +    ++       N
Sbjct: 271 NQ---GGATRNQLLSQHRARSVRNYLANKGIARHRVK-VKGFGASQPIADNNTLKGRIRN 326

Query: 332 RRIDILVED 340
           RR++  V +
Sbjct: 327 RRVEFEVLE 335


>gi|157963436|ref|YP_001503470.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157848436|gb|ABV88935.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 224

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 10/203 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q+ +   + +++ +             +I    +          I A         +   
Sbjct: 23  QTTNPYTNESQNGKATNGALIGAIAGAAIGVASSSKSDRAKGALIGAASGAALGGGIGYY 82

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-E 257
           +    + L       GV    +   I++++ +      F    +        VL  +   
Sbjct: 83  MDVQEAELRKQLQSSGVSVTRSGDNIILNMPNDVT---FGVDQTDLSQRAKQVLNSVVLV 139

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
            L +    +++ GHTD+         N RLS  RA      L +  V   R++   G   
Sbjct: 140 ALEYDETKLNVMGHTDS---SGAESYNLRLSQVRASEVANYLTRQKVPAQRVAS-HGMGE 195

Query: 318 HRLKIASDP--MNSANRRIDILV 338
            +   +++     + NRR++I++
Sbjct: 196 SKPIASNETKQGRAENRRVEIIL 218


>gi|78063303|ref|YP_373211.1| hypothetical protein Bcep18194_B2456 [Burkholderia sp. 383]
 gi|77971188|gb|ABB12567.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 214

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSL 289
           F  +S    P    +L+     +G  L    E++ I G  D        R   DNW LS 
Sbjct: 92  FALNSDQLQPAGRDLLKTLAAPLGAYLKTRDEILMISGFADDQQVHAGNRQFTDNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|295681051|ref|YP_003609625.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295440946|gb|ADG20114.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 559

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 13/150 (8%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            K++   L  + A +    +   +    + I      N  +FD   +   P     L+ +
Sbjct: 415 DKQLQVALERVTATSHSPSIAAHSPPLAVTI-----DNFLLFDTGKTTLKPGAEPRLKGV 469

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313
            +++  + +    I GHTD       +  N +LS  RA +     +  + +S  R   I 
Sbjct: 470 LDLIRANPDKRILIAGHTDNV---GPSVANQKLSEARAQAIRDWFVNTASLSVTRF-AIQ 525

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           G+   R   +++       NRR++I +   
Sbjct: 526 GYGDTRPIASNESRQGREMNRRVEISLIPD 555


>gi|254687000|ref|ZP_05150858.1| chemotaxis protein MotB [Bacillus anthracis str. CNEVA-9066]
 gi|254724563|ref|ZP_05186346.1| chemotaxis protein MotB [Bacillus anthracis str. A1055]
 gi|254754750|ref|ZP_05206785.1| chemotaxis protein MotB [Bacillus anthracis str. Vollum]
 gi|254757582|ref|ZP_05209609.1| chemotaxis protein MotB [Bacillus anthracis str. Australia 94]
          Length = 153

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           ++ L KKI   ++      +      + T  G++++I++     +FD   +    E++ +
Sbjct: 1   MKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGI 54

Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308
            +++  +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++
Sbjct: 55  AKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEK 114

Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            S I G+  +R    +D     + NRR+++ + 
Sbjct: 115 FSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 146


>gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 486

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 85/274 (31%), Gaps = 15/274 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P  ++    ++           +  +   +   + +  ++        N   +  ++  +
Sbjct: 206 PNTQDKCPNTRKGLKVDKFGCPTDSDYDGVPEAQDLCPDTSRGVPVDKNGCPESAKVPVS 265

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP--------PLSKEK 182
               +          SL      G+       +       +  F           L   K
Sbjct: 266 APVPAPVPAPAAEGVSLPGLPPAGEVAASPLPMNPLHPTPKAAFADMDFLQPVGNLGPLK 325

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               K   +L    +                  +     + ++   +    T +F   SS
Sbjct: 326 SAPAKPTVQLPPSVQLPPPVQVPPSESASAPQPIITADPSSVVGKTLVGTVTVLFAVDSS 385

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+ +  ++KI ++L  +    + + GHTD +      RDN +LSL RA +  + L++
Sbjct: 386 DVSPKYLGQIKKIADLLKANPGSTALVEGHTDNT---GALRDNLKLSLRRAENLKRALVR 442

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
            GV   R+  + G    +   ++        NRR
Sbjct: 443 YGVDP-RLLAVKGEGSLQPVASNATEQGRQKNRR 475


>gi|78485864|ref|YP_391789.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78364150|gb|ABB42115.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
          Length = 248

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 5/167 (2%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              ++   + + K + R + L     S             +          + +      
Sbjct: 68  TEQINPIPMQSSKIEARPEKLKPLYESIAKTYEKSQQESNIEVTIDEERQQVKVS-FPER 126

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293
             F    +   P   V L+   + L  +T ++   GHTD  P  +     NW LS  RA 
Sbjct: 127 ISFPTGEADLKPGFSVQLR-KLKNLIDNTILVKAIGHTDKRPISSDRFRSNWELSSARAA 185

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           +  Q L+   +     +++ G A         +D   + NRR+++++
Sbjct: 186 AVIQQLIDDKIITPDQAEVIGVADTHPVDEQENDAAYALNRRVEVVL 232



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 45/130 (34%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
            +W   +AD M++LMA F++++ ++  D    + I +       +    S+   +     
Sbjct: 9   PTWLATFADLMSLLMAVFVLLFAMSTLDAKKYEGIVESLTNTLGHGAGMSQVQLEYFKKT 68

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E+ +   +  S  E   +    L        ++ Q+  N    +   +Q           
Sbjct: 69  EQINPIPMQSSKIEARPEKLKPLYESIAKTYEKSQQESNIEVTIDEERQQVKVSFPERIS 128

Query: 151 SEKGKDLCKS 160
              G+   K 
Sbjct: 129 FPTGEADLKP 138


>gi|326798930|ref|YP_004316749.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326549694|gb|ADZ78079.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 229

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           I+   +  +F    +   PE    ++ + + L  + +    I GHTD    +  A  N  
Sbjct: 104 IVKFDSGILFGFDQTALKPEAQTNIKNLVKSLNDNPDTDILIIGHTDN---KGTAEYNQG 160

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           LS  RA +     +  G+S  R +K  G + +     +      + NRR++I++   +
Sbjct: 161 LSERRAAAVKNYAVAQGLSSSR-AKTEGKSFNEPIADNSTEAGRAQNRRVEIVIVANE 217


>gi|317153788|ref|YP_004121836.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944039|gb|ADU63090.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 247

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 71/196 (36%), Gaps = 9/196 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE    + ++   +                    A+ R++ ++   K  +   +      
Sbjct: 52  SETFSSVTQALQGKLEKVSTSRITQEEAGVLIDQAIMRRQIIESQRKVFAEVKTLQTKKG 111

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIR 269
           +   V        I I +       MF        P+ + ++  + +  + H  + I I 
Sbjct: 112 VEGLVSANFEDGLITIRV---PGDVMFGSGQVNLSPKGVELVTALKDFFIQHRDQNIKII 168

Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           G+TD       +   DNW +S  RA +  + L+  G+   R++  +G A+      +   
Sbjct: 169 GYTDNISPGKNSRFLDNWEISALRAVNVLRELLGMGIESTRLTA-TGLAYLNPIYPNTSE 227

Query: 328 --NSANRRIDILVEDR 341
              + NRR++ ++E R
Sbjct: 228 EFRAKNRRVEFVLEKR 243


>gi|157692040|ref|YP_001486502.1| flagellar motor protein MotB [Bacillus pumilus SAFR-032]
 gi|157680798|gb|ABV61942.1| flagellar motor protein B [Bacillus pumilus SAFR-032]
          Length = 254

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 81/206 (39%), Gaps = 10/206 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q     N +        D       E++ N  +        +E     +    L  + K
Sbjct: 48  EQMAKSFNVVFTGGTGVMDQSSMQSTEETENSNQTKKAAEEDEEAKAKARDHAVLTKVKK 107

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++ S ++      +   +  + T  G+LI+I D      FD   ++  P+ + + ++I +
Sbjct: 108 QVDSFIAN---KKLGAKLETKLTDEGLLITIEDS---IFFDSGRAVIRPQDVPLAKEISK 161

Query: 258 VLAHSTEVISI-RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L  +     +  GHTD  P RN     NW LS  RA +   +L+++           GF
Sbjct: 162 LLVINPARDIVISGHTDNVPIRNSDFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGF 221

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
              +   ++D       NRR+++L+ 
Sbjct: 222 GEFKPIASNDTAEGRSKNRRVEVLIL 247


>gi|256839827|ref|ZP_05545336.1| outer membrane lipoprotein [Parabacteroides sp. D13]
 gi|298375585|ref|ZP_06985542.1| OmpA family protein [Bacteroides sp. 3_1_19]
 gi|256738757|gb|EEU52082.1| outer membrane lipoprotein [Parabacteroides sp. D13]
 gi|298268085|gb|EFI09741.1| OmpA family protein [Bacteroides sp. 3_1_19]
          Length = 428

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   PE++  + +I +++  + +   S+ GHTD++        N  LS  R+ + 
Sbjct: 327 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 383

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
              L++ G+S DR+S  SG         +  D   + NRR++ +
Sbjct: 384 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 426


>gi|288940353|ref|YP_003442593.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288895725|gb|ADC61561.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 608

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 90/284 (31%), Gaps = 7/284 (2%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             + + +       +    ++ +   ++  +    +   +  +    + +++  +     
Sbjct: 328 ELQTVLETARAEAGDEARKTERLAAAESRIQELESSLETVRAEAEEARTTLNAALEQARA 387

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +    +          +Q        +     + +         ++++  +       ++
Sbjct: 388 RLAELQQAAETTAQDENQALTEATARIAALEAELEQARAQDGDAEALSAAQARIDALEAE 447

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            +      +       +  ++     +     +      T T   + +    +   F   
Sbjct: 448 LETARQSVQPEAPSADQSEAAAELARLRALQTRFAQLNGTFTERGLLLSLAESELSFPTG 507

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            +      +  L++I E+L    E    I GHTD+      A  N  LSL RA +  Q L
Sbjct: 508 RATLPTGELASLERIAELLKAHPELTARIEGHTDSL---GSAALNQSLSLQRAEAVRQAL 564

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           ++ GV   R+S   G    R    +        NRR+++ + DR
Sbjct: 565 VERGVDGGRLSA-EGLGPTRPIADNATAEGRGKNRRVEVYILDR 607


>gi|149919402|ref|ZP_01907883.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149819708|gb|EDM79133.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 182

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+  L ++  +L  + EV+    E  ++ I GHT         + N  LS  RA +
Sbjct: 70  FAHDSAEILEDSFEILDDVAEVMNAHPELPMLDIIGHTSTE---GSDKHNMELSTARAKA 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
               L   GV   R++   G                  NRR++  +   +
Sbjct: 127 VADYLAGHGVDASRVTS-EGKGETEPIADESTEEGKRQNRRVEFKIIKPE 175


>gi|94986926|ref|YP_594859.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731175|emb|CAJ54537.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 237

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +      K  L           K+ D     N      +  L   ++   + ++    LA
Sbjct: 27  AMTPPEVKEGLAAYFSSSDATFKTPDSSPISNNPLINQIDKLDTRQLKINETEQSHYALA 86

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            K+   L          G+  +     + ++     +   F   ++   PE   V+  + 
Sbjct: 87  NKLKKMLMADAIPQSATGISADDVGVLLRVN-----SNSTFLPGTATLTPEGKKVMGTVL 141

Query: 257 EVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            VL      + IRGH D       +    NW LS  RA +A Q L++ G+   RI  + G
Sbjct: 142 AVLREYNLYLVIRGHADIGEITKGSPFASNWELSGARAAAAAQYLVEHGIKASRIRSV-G 200

Query: 315 FAHHRLKIASDPMNS-ANRRIDILVEDRQ 342
           +A  R    S P  S  NRRI+      +
Sbjct: 201 YADTRPLEPSSPEGSTKNRRIEFYFHRPE 229



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
            GSWK+ YADF+T +MAFFL+MWI+  T  + K+ +  YF+       T           
Sbjct: 2   SGSWKVAYADFVTAMMAFFLLMWILAMTPPEVKEGLAAYFSSSDATFKTPDSSPISNNPL 61

Query: 90  PERSSQNKIDLSIDEHITKN 109
             +  +            ++
Sbjct: 62  INQIDKLDTRQLKINETEQS 81


>gi|78060486|ref|YP_367061.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77965036|gb|ABB06417.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 220

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++        L  +  +        + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTSAATAALDTLLNQQGDKHFSRVEVDGYTDAT---GSDAHNQVLSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +    L + G+  +     +G        +++     + NRR++I ++ 
Sbjct: 171 ADAVAGYLREHGLKAESF-AATGHGETNPAASNETAEGRARNRRVEISLQK 220


>gi|307718975|ref|YP_003874507.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
           6192]
 gi|306532700|gb|ADN02234.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
           6192]
          Length = 395

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 12/149 (8%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +K+   +   + D  +     ET+  G+ I +        F   S++ LPE    L+KI
Sbjct: 254 REKVREEVEAAIEDLQIPDAEVETSEEGVTIRL----ENIQFPPDSALLLPEEQEKLRKI 309

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKIS 313
            ++L+   E    + GHT              LS++RA +    LMK GV   ++I  I 
Sbjct: 310 AQILSRYPERDLLVEGHT---ALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIV-IR 365

Query: 314 GFAHHRLKIASDPMNS--ANRRIDILVED 340
           G+   R    +        NRR++I + +
Sbjct: 366 GYGATRPIADNTTEEGRSRNRRVEITILE 394


>gi|224436415|ref|ZP_03657435.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
 gi|313142933|ref|ZP_07805126.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
 gi|313127964|gb|EFR45581.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
          Length = 250

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTD--ASPFRNIARDNWR 286
            +   F+  S+     +  + LQ++  ++    +   I +RG+TD  + P  +  +DN+ 
Sbjct: 116 PSNLFFESGSAEINNSDVYLYLQRMTAIIKKLPDYVKIDVRGYTDNASLPIGSRYKDNYE 175

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           LS  R+ +  + L+K+G+S +RI   SG+  H+    +D     + N R++I 
Sbjct: 176 LSSARSLAVMKNLIKNGISPERI-SFSGYGEHQAVAPNDSTINRAKNNRVEIF 227



 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 8/226 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG----- 73
           KK    + P     W + YADF+++L+A F+ +W I++T     +A++  F         
Sbjct: 3   KKKKCPECPAG-EKWAVPYADFLSLLLALFIALWAISSTGSADSEALKTEFVKIFDFTLT 61

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
             L +    I D +   E  + ++        I + + +  I    +     RL +N+F+
Sbjct: 62  SPLPSNQDDINDSEVENESGAISQTSSVTTAEIQQMAEEGGILEQMEMGLSLRLPSNLFF 121

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL--AMKRKKR 191
            S S +  +    L               ++  +    +    P+         +   + 
Sbjct: 122 ESGSAEINNSDVYLYLQRMTAIIKKLPDYVKIDVRGYTDNASLPIGSRYKDNYELSSARS 181

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L  +   I + +S         G           I+        +F
Sbjct: 182 LAVMKNLIKNGISPERISFSGYGEHQAVAPNDSTINRAKNNRVEIF 227


>gi|86147507|ref|ZP_01065818.1| outer membrane protein [Vibrio sp. MED222]
 gi|218709202|ref|YP_002416823.1| putative outer membrane protein [Vibrio splendidus LGP32]
 gi|85834675|gb|EAQ52822.1| outer membrane protein [Vibrio sp. MED222]
 gi|218322221|emb|CAV18335.1| putative outer membrane protein [Vibrio splendidus LGP32]
          Length = 222

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +     +     +       +  I A         
Sbjct: 18  QATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDRRKRALIGAAGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L  ++   N   FD  S          L+ 
Sbjct: 78  IGYYFDQQEAALREELMNSGVQVERVGENQL--LLRLENGIGFDSGSYALESSIHKTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  GHTD++        N  LS  RA S    L+   V+  R     
Sbjct: 136 VARILVEYPDTSLVIEGHTDST---GSESSNQVLSERRAESVRAFLISQDVAAGRAIA-R 191

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339
           G         ++     + NRR++I + 
Sbjct: 192 GNGERYPLCDNNTSQGRACNRRVEIQIL 219


>gi|188592172|ref|YP_001796770.1| hypothetical protein RALTA_B0336 [Cupriavidus taiwanensis LMG
           19424]
 gi|170938546|emb|CAP63533.1| Putative transmembrane protein, OmpA/MotB motif [Cupriavidus
           taiwanensis LMG 19424]
          Length = 215

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      + +   L+G +A            R  ++   I    + +
Sbjct: 43  ELSARLEAEVKQRQEEAQRRETLEKALAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S+   PE   +L+ + +     L    E++ + G TD    R       DNW LS 
Sbjct: 93  FALNSAELQPEGRDLLRSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +  + L+ +G+    +   + F   +    +      + NRR++I
Sbjct: 153 QRALTVTRTLIDAGIPPSSVFSAA-FGSQQPVTPNADAASRAKNRRVEI 200


>gi|291532054|emb|CBK97639.1| Flagellar motor protein [Eubacterium siraeum 70/3]
          Length = 339

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 14/196 (7%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212
              +        + +   N   PP ++      ++ + L     ++ S L      +++ 
Sbjct: 59  NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269
           + V  E T T I I      NT MFD +S++   E   VL K    +       +   + 
Sbjct: 119 QYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCEVS 175

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT  +       ++W LS  RA S  + +     V  ++   + G A +     +    
Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231

Query: 329 SA--NRRIDILVEDRQ 342
               NRR++I++   Q
Sbjct: 232 GRATNRRVEIMIVRAQ 247



 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                     G+W   YAD +T+L+ FF++++  ++ D+   + I Q F   G  +    
Sbjct: 3   KRRAGGGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  NP     Q K + +      +   + + G T  ++      +
Sbjct: 59  -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100


>gi|312174309|emb|CBX82562.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
           amylovora ATCC BAA-2158]
          Length = 221

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SSS   P     L  +  
Sbjct: 81  YMDVQEAKLRDKMKGTGVSVTRSGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 137

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD+       + N  LS  RA      L+  GV+ +R+ + +G  
Sbjct: 138 VLKEYPKTAVNVVGYTDS---SGSRQLNMNLSQQRADGVGSALIAQGVAANRV-RTNGMG 193

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 194 SDNPVASNSSAEGKAQNRRVEITL 217


>gi|163755660|ref|ZP_02162779.1| OmpA/MotB [Kordia algicida OT-1]
 gi|161324573|gb|EDP95903.1| OmpA/MotB [Kordia algicida OT-1]
          Length = 635

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 225 LISIIDQ---RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280
           +++I D         FD  SS        +L  I   L +       I GH D+      
Sbjct: 515 VVTIPDPAVGERKVYFDFDSSKLDKNAKEILDNIAANLKNDAGYNISIIGHADSR---GT 571

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            R N +LS++RA      L    +S   I  I+G         +      + NRR+++++
Sbjct: 572 DRYNDKLSIERAQVIKNYLDSKKLSNSNI-TITGKGESAPIAPNTTPEGRAKNRRVELII 630


>gi|315180390|gb|ADT87304.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218]
          Length = 222

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + +Q+          +S     L  +           +       +  I A         
Sbjct: 18  AATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKERRQRALIGAAGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L+  +  +N   F  +S          L+ 
Sbjct: 78  VGYYFDQQEAALRQELLNSGVQVERVGENQLVLRM--QNGIGFQTNSYQLDSSIHNTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + ++L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     
Sbjct: 136 VAKILVEYPDTSLVIDGHTDST---GSDTTNQILSERRAESVRSFLLSQGVAAGRAIA-R 191

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G         +   +    NRR++I + 
Sbjct: 192 GNGERYPLCTNSTADGRSCNRRVEIQIL 219


>gi|313610144|gb|EFR85455.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208]
          Length = 170

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
             +L  + +++++   K+I S ++    +N+   +  + +  G+LI+I D     +F   
Sbjct: 1   AALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSG 54

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
           S+        + ++IGE+       +   + GHTD  P        NW LS+ RA +  +
Sbjct: 55  SAELTAGKREIAKEIGELFXQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFME 114

Query: 298 VLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
            +++    V+    S   G+   R    +D       NRR++I+V 
Sbjct: 115 AIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 159


>gi|121603984|ref|YP_981313.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120592953|gb|ABM36392.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 220

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   S        VL      L  +    +SI GHTD++        N  LS
Sbjct: 107 DIPSDVSFDVGRSAIKSNFAPVLTNFATSLNQNPITTVSIIGHTDST---GSDSVNNPLS 163

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +DRA +A   L+  GV+  RI    G         +      + NRR++I V
Sbjct: 164 VDRANAARDYLVGRGVAAQRI-ATDGRGSREPIADNSSAQGRAKNRRVEIYV 214


>gi|114045658|ref|YP_736208.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113887100|gb|ABI41151.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 487

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L      +   G+  E     I           +F+  S   LPE   V++ +   L 
Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318
            + +    + GHTD    +     N  LS  RA +  ++L    G+   ++  + G   H
Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTSSHGIQTQQLEAV-GIGEH 460

Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341
               ++        NRR+++++   
Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485


>gi|311746464|ref|ZP_07720249.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
 gi|126575359|gb|EAZ79691.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
          Length = 282

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 92/271 (33%), Gaps = 14/271 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            GI          S+ K            +          + + +           + + 
Sbjct: 8   TGILGASMMVSCVSKKKYTELESNLFKTQTELANTNQEKAELEEKMAIIEARVAEYNNRI 67

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD-----L 195
              +      S +   L             +      L+K     +   + L+D     +
Sbjct: 68  NSLRAVNDELSGENASLYDIQGSTIMSKNSKEKMNETLAKVDQAKLAEAQTLEDSVNLAV 127

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              +   ++    D     V  +  +T ++IS+ D+    +F+  S     +   +LQK+
Sbjct: 128 EYNLKQNITETTVDGEEDDVQIDIDQTVVMISVSDKL---LFNTGSYRINKKADPLLQKL 184

Query: 256 GEVLAHSTE-VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312
            EV+       + I GHTD       + +DNW LS+ RA S  + L ++  V+ +++   
Sbjct: 185 AEVINAEPSLQVMIEGHTDPRSISTGVLQDNWDLSVKRATSIVRKLQENYSVAPEKMIAA 244

Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            G + +   + +D     + NRR  I++   
Sbjct: 245 -GRSSYMPLVENDTPENMAINRRTRIVLIPD 274


>gi|22127962|ref|NP_671385.1| putative outer membrane lipoprotein [Yersinia pestis KIM 10]
 gi|45443710|ref|NP_995249.1| putative outer membrane lipoprotein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51598197|ref|YP_072388.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 32953]
 gi|108808999|ref|YP_652915.1| putative outer membrane lipoprotein [Yersinia pestis Antiqua]
 gi|108813881|ref|YP_649648.1| putative outer membrane lipoprotein [Yersinia pestis Nepal516]
 gi|145597343|ref|YP_001161418.1| putative outer membrane lipoprotein [Yersinia pestis Pestoides F]
 gi|150260986|ref|ZP_01917714.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|162420588|ref|YP_001608097.1| putative outer membrane lipoprotein [Yersinia pestis Angola]
 gi|165926066|ref|ZP_02221898.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936922|ref|ZP_02225488.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009516|ref|ZP_02230414.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213252|ref|ZP_02239287.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398489|ref|ZP_02304013.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421106|ref|ZP_02312859.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425514|ref|ZP_02317267.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467912|ref|ZP_02332616.1| OmpA family protein [Yersinia pestis FV-1]
 gi|170022281|ref|YP_001718786.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
           YPIII]
 gi|186897420|ref|YP_001874532.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
           PB1/+]
 gi|218931056|ref|YP_002348931.1| putative outer membrane lipoprotein [Yersinia pestis CO92]
 gi|229839783|ref|ZP_04459942.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229841867|ref|ZP_04462023.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229896745|ref|ZP_04511909.1| putative lipoprotein [Yersinia pestis Pestoides A]
 gi|229904405|ref|ZP_04519516.1| putative lipoprotein [Yersinia pestis Nepal516]
 gi|270488345|ref|ZP_06205419.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294505605|ref|YP_003569667.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|21961106|gb|AAM87636.1|AE014011_3 putative outer membrane protein [Yersinia pestis KIM 10]
 gi|45438580|gb|AAS64126.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
 gi|51591479|emb|CAH23150.1| OmpA-OmpF family porin [Yersinia pseudotuberculosis IP 32953]
 gi|108777529|gb|ABG20048.1| lipoprotein [Yersinia pestis Nepal516]
 gi|108780912|gb|ABG14970.1| putative lipoprotein [Yersinia pestis Antiqua]
 gi|115349667|emb|CAL22647.1| putative lipoprotein [Yersinia pestis CO92]
 gi|145209039|gb|ABP38446.1| lipoprotein [Yersinia pestis Pestoides F]
 gi|149290394|gb|EDM40471.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|162353403|gb|ABX87351.1| OmpA family protein [Yersinia pestis Angola]
 gi|165915164|gb|EDR33775.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921926|gb|EDR39103.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991438|gb|EDR43739.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205550|gb|EDR50030.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961235|gb|EDR57256.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050993|gb|EDR62401.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055528|gb|EDR65321.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169748815|gb|ACA66333.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
 gi|186700446|gb|ACC91075.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
 gi|229678523|gb|EEO74628.1| putative lipoprotein [Yersinia pestis Nepal516]
 gi|229691206|gb|EEO83259.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229696149|gb|EEO86196.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700284|gb|EEO88319.1| putative lipoprotein [Yersinia pestis Pestoides A]
 gi|262363769|gb|ACY60490.1| putative lipoprotein [Yersinia pestis D106004]
 gi|262367705|gb|ACY64262.1| putative lipoprotein [Yersinia pestis D182038]
 gi|270336849|gb|EFA47626.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294356064|gb|ADE66405.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|320017406|gb|ADW00978.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 219

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLREKMSGTGVSVTRQGENIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA +    L+  GV+ +RI +  G  
Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNIVLSQQRADNVASALIVQGVAANRI-RTYGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216


>gi|319792464|ref|YP_004154104.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315594927|gb|ADU35993.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 216

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  PE    L  + E +      + I  GHTD+         N RLS+ RA +    L+ 
Sbjct: 116 VLKPEGRAKLTDLVEKIRGVNLEVIIAVGHTDSI---GTDAYNQRLSVRRAEAVKAFLVS 172

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            G+  +R+    G    +    +      + NRR++I V   +
Sbjct: 173 KGIERNRVYT-EGKGEKQPVADNRTKEGRAKNRRVEIEVVGTR 214


>gi|29840731|ref|NP_829837.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
 gi|29835081|gb|AAP05715.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
          Length = 191

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E  + +      ++       + I GHTD       A  N  L   RA +
Sbjct: 87  FATDSYTIKGEENLAILSSLVRQMQKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G+S DR+  IS +   +   +  ++     NRR +  V  R
Sbjct: 144 VKQHLIKQGISADRLFTIS-YGKEQPVNSGHNELAWQQNRRTEFKVHAR 191


>gi|91785602|ref|YP_560808.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689556|gb|ABE32756.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 584

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDR 291
           F  +S+      +  L +   VL             + G++D          N +LS  R
Sbjct: 478 FASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNV---GGEAANLQLSKQR 534

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A +    L+++GV  D +    G+   R   ++D  +    NRRI+ +
Sbjct: 535 AEAVRAYLVRTGVPADSLIA-QGYGDARPVASNDTASGRFANRRIEFV 581


>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
 gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
          Length = 357

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 25/133 (18%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 229 KSDVLFTFNKASLKPEGQQALDQLYTQLSSLDPKDGSVVVLGYTDRI---GSDQYNQKLS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDI- 336
             RA S    L+  G+  ++IS   G         +  D +   N         RR++I 
Sbjct: 286 EKRAQSVVDYLVSKGIPSNKISA-RGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEIE 344

Query: 337 ------LVEDRQG 343
                 +V   QG
Sbjct: 345 VKGIKDVVTQPQG 357


>gi|206562551|ref|YP_002233314.1| hypothetical protein BCAM0690 [Burkholderia cenocepacia J2315]
 gi|198038591|emb|CAR54550.1| putative outer membrane protein-OmpA family [Burkholderia
           cenocepacia J2315]
          Length = 214

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ ++      K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQLEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P    +L+     +   L    E++ + G  D            DNW LS 
Sbjct: 92  FALNSDQLQPAGRDLLKTLAVPLATYLKTRDEILMVSGFADDQQVHAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|116327025|ref|YP_796745.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332316|ref|YP_802034.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116119769|gb|ABJ77812.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116126005|gb|ABJ77276.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 667

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 8/149 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +S  L+     N  + V        I      Q N   F+  S   +PE+   L ++ E
Sbjct: 523 PVSQNLNLNSKKNFSEKVEVLLQLPRIEERGTIQINNLFFESKSFRIIPESEPELNRLAE 582

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315
           ++  + ++   I GHTD        +DN  LS  RA +  + L  K  +  +RI    GF
Sbjct: 583 IMKENPDIKIQIEGHTDNV---GKKKDNLLLSEKRAIAIAEYLSQKHSIPTERIKT-RGF 638

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +     +D       NRR++  +   +
Sbjct: 639 GDNFPLSKNDSEEGRRKNRRVNFTILKSK 667


>gi|260431631|ref|ZP_05785602.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415459|gb|EEX08718.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 643

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 77/295 (26%), Gaps = 15/295 (5%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK------NS 110
           TD      +          +      +   +                E + +      + 
Sbjct: 315 TDPALFDRVVGELENALPEVFALHAVLPKPETDKHDGPVEFTATRSPEGLVQLRGRLGDE 374

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           +   +  +  +  +     +       +  +     +    E    L          N  
Sbjct: 375 LQRDMVDSYARAAFGSDRVHTAARVVEELPQTWPVRVLAGLEALSWLTNGALTVTPDNVA 434

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +           +A    ++L +      S     V +        +       I  + 
Sbjct: 435 LSGISHDQDARAKIAGLLSEKLGEGQNFDLSITYQPVPEPA--ETRPDPDACEARIVEVQ 492

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+  S+    ++   L +I E+L       + I+GHTD+         N +LS 
Sbjct: 493 SGGKITFEPGSATVSADSRDSLNQIAEILRECGPIRMEIQGHTDSQ---GREEMNQQLSQ 549

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            RA S    L    V     S + G+   +    +        NRRI+  +   +
Sbjct: 550 ARAQSILNELRARRVPTSSFSAV-GYGETQPIADNGTEEGREENRRIEFRLIRPE 603


>gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 628

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F  +    LP +   L  +   L  +    I I GHTD +      + N  LS +R
Sbjct: 522 NNIFFALNKYDLLPSSTSDLNTLVLFLQENPLIRIEIGGHTDNT---GNDQLNKTLSDNR 578

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +    L+  G+S +R+    G+  ++    ++     + NRR +  +
Sbjct: 579 AKAVVSYLIARGISANRLLA-KGYGSNQPLATNETETGKALNRRTEFKI 626


>gi|117918603|ref|YP_867795.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117610935|gb|ABK46389.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 487

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L      +   G+  E     I           +F+  S   LPE   V++ +   L 
Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318
            + +    + GHTD    +     N  LS  RA +  ++L    G+   ++  + G   H
Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTTSHGIQTQQLEAV-GIGEH 460

Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341
               ++        NRR+++++   
Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485


>gi|299768758|ref|YP_003730784.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
 gi|298698846|gb|ADI89411.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
          Length = 159

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD +++         L ++   L       + I GHTD       A  N +LS +
Sbjct: 52  PERLLFDFNNAELKQSHEAELVRLANQLNKYDLNKLKIVGHTDDV---GDAAYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I+V
Sbjct: 109 RAQSVANLFLARGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157


>gi|313674297|ref|YP_004052293.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312940995|gb|ADR20185.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 665

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S +   +++ +L K+  V+  + +    I GHTD          N  LS  RA + 
Sbjct: 562 FELASDVIRAQSLPILDKVVTVMQENPDYKLKISGHTDNQ---GDDDANLLLSHKRAQAT 618

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            + LM  G++  R+  + G+   +   ++D     + NRR++  +
Sbjct: 619 KKYLMDQGIAILRLDAV-GYGEMQPIESNDTAEGRAKNRRVEFEI 662



 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 211 IVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-S 267
           + + +  E     + I++  +   +   F  ++ I   +    L +   +L  + ++   
Sbjct: 374 LSEYLEKEQKLAMLPIAVGSEIPVHHITFVNNADIFRSDAYYELDRFASLLQSNPQMQVE 433

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GHT   P      +N RLS +RA +      K  V  DR+ +I G        ++  +
Sbjct: 434 IIGHTAQLPL---EAENDRLSYNRAKAVADYFEKKNVHPDRL-RIKGAGQKLAFSSNMDV 489

Query: 328 NSAN-----RRIDILV 338
              N      RI I +
Sbjct: 490 ALKNGIELEDRITIKI 505


>gi|167574381|ref|ZP_02367255.1| hypothetical protein BoklC_31379 [Burkholderia oklahomensis C6786]
          Length = 421

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 7/134 (5%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
            +     V  +       ++        MF   ++        ++ KI   +      ++
Sbjct: 290 NEIAAGTVSVDEDSRHGSVTFRSD---AMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVT 346

Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           + G+TD  P  +     N  LS +RA    Q+L  +GV   R+  + G         +  
Sbjct: 347 VTGYTDNVPINSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPIGDNGT 405

Query: 327 --MNSANRRIDILV 338
               + NRR+DI V
Sbjct: 406 VQGRALNRRVDITV 419


>gi|148979919|ref|ZP_01815777.1| outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145961523|gb|EDK26825.1| outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 221

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + ++ V+       +  + +      N   FD  S          L+ + 
Sbjct: 82  DRQEAALREELMNSGVQVERVGENQLLLRLE-----NGIGFDSGSYALESSIHNTLRGVA 136

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+   V+  R     G 
Sbjct: 137 RILVEYPDTSLVIEGHTDST---GSESTNQILSERRAESVRAFLISQDVAAGRAIA-RGN 192

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                   ++       NRR++I + 
Sbjct: 193 GERYPLCDNNTSRGRACNRRVEIQIL 218


>gi|104783066|ref|YP_609564.1| peptidoglycan-associated lipoprotein [Pseudomonas entomophila L48]
 gi|95112053|emb|CAK16780.1| peptidoglycan-associated lipoprotein precursor [Pseudomonas
           entomophila L48]
          Length = 165

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRSLDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163


>gi|17548982|ref|NP_522322.1| lipoprotein [Ralstonia solanacearum GMI1000]
 gi|17431232|emb|CAD17912.1| putative outer membrane protein [Ralstonia solanacearum GMI1000]
          Length = 277

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D +     +     +  G     +  +              +   +  +         
Sbjct: 34  PGDPAPASATSPVPGPVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93

Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                K    +          +          ++ + + Q LA  +++TL          
Sbjct: 94  TGNVQKILSPQIKQVSRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            V   + ++ +  ++ ++     F+  S+   P+   +L ++  VL         I GHT
Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D          N  LS  RA +    L+  G     ++ I G    +    +  D   S 
Sbjct: 212 DN---SGSRAMNLNLSQARAETVKNYLISKGAEPGTLTAI-GVGPDQPVAPNATDEGRSR 267

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 268 NRRIEF 273


>gi|311108875|ref|YP_003981728.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
 gi|310763564|gb|ADP19013.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
          Length = 264

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 16/243 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KD 156
            +   +V  + G                 L+  QQ     N + +    G        + 
Sbjct: 23  TVVPANVIPQPGQVVASGAVPDEATKADVLARLQQVYGVGNVIDQIDVGGVVAPPNWSEH 82

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
           + K               +          ++ +   Q +A   +++L+          V 
Sbjct: 83  IGKLIGQPLKQINRGQLEIDGTQIRLRGEVQNEASRQQIASAFATSLNPTYKIVNGLRVS 142

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDAS 275
                 G+L  ++  R    F+  S+        +L K+ +V+    ++ + I GHTD+ 
Sbjct: 143 ASKDEQGLLDQVLTNR-VVEFETGSATLTTRGRELLDKVADVVPKLHSDKVQIIGHTDS- 200

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
                   N  LS  RA +    L+  G+   R   + G    +    +      + NRR
Sbjct: 201 --SGSRSTNLALSQARADAVKTYLVDKGLPPARFETL-GAGPDQPLATNATAEGRAKNRR 257

Query: 334 IDI 336
           I+ 
Sbjct: 258 IEF 260


>gi|258626412|ref|ZP_05721259.1| putative lipoprotein [Vibrio mimicus VM603]
 gi|258581464|gb|EEW06366.1| putative lipoprotein [Vibrio mimicus VM603]
          Length = 223

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  SS          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  +++       NRR++I + 
Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220


>gi|291558208|emb|CBL35325.1| Flagellar motor protein [Eubacterium siraeum V10Sc8a]
          Length = 339

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212
              +        + +   N   PP ++      ++ + L     ++ S L      +++ 
Sbjct: 59  NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269
           + V  E T T I I      NT MFD +S++   E   VL K    +       +  S+ 
Sbjct: 119 QYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVS 175

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT  +       ++W LS  RA S  + +     V  ++   + G A +     +    
Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231

Query: 329 SA--NRRIDILVEDRQ 342
               NRR++I++   Q
Sbjct: 232 GRAANRRVEIMIVRAQ 247



 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               ++    G+W   YAD +T+L+ FF++++  ++ D+   + I Q F   G  +    
Sbjct: 3   KRRAESGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  NP     Q K + +      +   + + G T  ++      +
Sbjct: 59  -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100


>gi|83717470|ref|YP_438322.1| hypothetical protein BTH_II0120 [Burkholderia thailandensis E264]
 gi|257141351|ref|ZP_05589613.1| hypothetical protein BthaA_19409 [Burkholderia thailandensis E264]
 gi|83651295|gb|ABC35359.1| unnamed protein product; Similar to putative exported protein
           [Burkholderia thailandensis E264]
          Length = 558

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F    +   P       +     +LA+  + + I GH+D+         N +LS  RA 
Sbjct: 441 LFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 497

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +     +  GV + R   + G         +      + NRR++IL+   
Sbjct: 498 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILLIPD 546


>gi|254249905|ref|ZP_04943225.1| Outer membrane protein [Burkholderia cenocepacia PC184]
 gi|124876406|gb|EAY66396.1| Outer membrane protein [Burkholderia cenocepacia PC184]
          Length = 221

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           +I  ++     +F    +   P     L ++    A  T   +++ G TD+         
Sbjct: 107 VIERVNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSV---GSDDY 163

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           N  LS  RA +    L   G+  D +  +SG        ++        NRR++I ++
Sbjct: 164 NLALSKRRAEAVAAYLKAHGLKTDSM-TVSGRGKADPVASNATPEGRASNRRVEIRLQ 220


>gi|310780073|ref|YP_003968405.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
 gi|309749396|gb|ADO84057.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
          Length = 216

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                F   SS        VL  +  +L    +    + GHTD +        N RLS +
Sbjct: 107 PGNLTFRTGSSDINSGFYDVLDSVATILVEYKDTTIFVSGHTDNT---GSLATNQRLSQE 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S  + L   GV   RIS   GF +     ++   +    NRR++I +    
Sbjct: 164 RANSVGRYLSSRGVLSSRISS-QGFDYQFPIASNSTASGREQNRRVEIEITGTN 216


>gi|221210851|ref|ZP_03583831.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221169807|gb|EEE02274.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 214

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P+   +L+     +   L    +++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|126734944|ref|ZP_01750690.1| OmpA family domain protein [Roseobacter sp. CCS2]
 gi|126715499|gb|EBA12364.1| OmpA family domain protein [Roseobacter sp. CCS2]
          Length = 220

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
              +    +  +++++G  +              +  +   ++  ++       +     
Sbjct: 21  AACDPAGPNQNQNTQQGALIGAGAGAVLGALTNNDGSVRERNQAALIGAALGAGVGAGVG 80

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                 +  +   +   V        + + + +     +F  +S+         L+ +  
Sbjct: 81  NSLDRQAEDLRRQLRNDVGVSNNGRDLRVVLSEDL---LFATNSTQLSGTAQRELRIVAN 137

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +  +++ GHTD       A  N  LS  RA +   VL+  GVS +RI  I G  
Sbjct: 138 SLQQYPDSTVNVIGHTDNV---GEASFNQGLSERRASAVSSVLVGGGVSRNRIRTI-GAG 193

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
            +    +  +     ANRR++I++ 
Sbjct: 194 ENNPVASNLNAAGRQANRRVEIVIT 218


>gi|110598524|ref|ZP_01386793.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
 gi|110339828|gb|EAT58334.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
          Length = 170

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  SS    E    L++  E L +++ +   I GH D+      A  N  L   R
Sbjct: 65  GDVFFDFDSSTLGTEAQGQLKQNSEWLGSNTAKGALIEGHCDSR---GTAEYNLALGERR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVE 339
           A +A + L+K GV+  R+  +S +   R      +D   + NRR   +++
Sbjct: 122 AATAKEYLVKLGVAASRLESVS-YGEERPFDAAQNDEAWAKNRRAHFVIK 170


>gi|127511841|ref|YP_001093038.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126637136|gb|ABO22779.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 224

 Score = 92.7 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    S+       VL  +  
Sbjct: 82  YMDVQEAELRKQLQSTGVSVTRNGDNIILNM---PNEVTFGVDQSVLSSRAKNVLDSVAL 138

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     E ++++ G TD+         N RLS  RA      LM   +   RIS + G  
Sbjct: 139 VAKEYDETMLNVMGFTDS---SGSESYNLRLSQVRAAEVANYLMSREIKSQRISSV-GMG 194

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             R    +      + NRR++I++
Sbjct: 195 ESRPIADNSTQQGRAQNRRVEIVL 218


>gi|315186462|gb|EFU20222.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
          Length = 395

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 12/149 (8%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +K+   +   + D  +     ET+  G+ I +        F   S++ LPE    L+KI
Sbjct: 254 REKVREEVEAAIEDLQIPDAEVETSEEGVTIRL----ENIQFPPDSAVLLPEEQEKLRKI 309

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKIS 313
            ++L+   E    + GHT              LS++RA +    LMK GV   ++I  I 
Sbjct: 310 AQILSRYPERDLLVEGHT---ALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIV-IQ 365

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVED 340
           G+   R    +      S NRR++I + +
Sbjct: 366 GYGATRPIADNATEAGRSRNRRVEITILE 394


>gi|325286251|ref|YP_004262041.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321705|gb|ADY29170.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 701

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 93/277 (33%), Gaps = 19/277 (6%)

Query: 80  SKGIFDEQNPPERSSQNKIDLS--IDEHITKN-SVDLKIGSTNQKKQYQRLENNIFYLSN 136
            +G  D  N  +  + NK D S  I+E   K      + G       Y      +  ++ 
Sbjct: 427 EEGFKDVVNVGQPINSNKDDFSYIINEETQKGYFASNRKGGKGDDDIYSFKNLIVEEVNE 486

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +  +      +T D      +    +    + +           E + +  + K   +  
Sbjct: 487 NAIAGVVTEIVTGDLMPNALVTLLDENNIKLKEIVTEEDGSFVFEDLDSNTKYKLQANKE 546

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVV 251
                 L+    +N V  V     +   +I+I +     +     FD   S    +  V 
Sbjct: 547 TFFDEELNTATKENQVVNVDIAMRKLHDMIAIENGIKKLKTEKIFFDFDKSYIRQDASVE 606

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L K+ +V+     +   I  HTD    R     N  LS  RA S  + ++  G+ E+RI 
Sbjct: 607 LDKLVDVMTEYPNMKIKIESHTD---VRGNNAYNKYLSDKRAKSTRKYIISKGIDENRII 663

Query: 311 KISGFAHHRLKIASD-------PMNSANRRIDILVED 340
              G+   +L    +         +  NRR + ++ +
Sbjct: 664 SAIGYGEEQLINGCEDGVNCSREKHQENRRSEFIIVE 700


>gi|325279362|ref|YP_004251904.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324311171|gb|ADY31724.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 235

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N  +F  + S   P +   L K    L +S +   +I GHTD +        N R+S +
Sbjct: 114 DNGILFATNKSELSPASREALTKFATSLKNSPDTDVTIYGHTDNT---GTRAVNERISKE 170

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           RA +    L+  G+S  R++   G A  +    +      + NRR++I +  
Sbjct: 171 RADAVANFLVGQGISRSRLTT-EGLAFDQPVADNSTAEGRAQNRRVEIYITA 221


>gi|228941688|ref|ZP_04104235.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228817900|gb|EEM63978.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 153

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           ++ L KKI   ++      +      + T  G++++I++     +FD   +    E++ +
Sbjct: 1   MKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGI 54

Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308
            +++  +L + S   I++ GHTD  P  N     NW LS  RA +  QVL+++  +  ++
Sbjct: 55  AKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEK 114

Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            S I G+  +R    +D     + NRR+++ + 
Sbjct: 115 FSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 146


>gi|254787334|ref|YP_003074763.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
           T7901]
 gi|237684812|gb|ACR12076.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
           T7901]
          Length = 166

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   SI   +    L    EVL  + + + + GH D          N  L   RA +  
Sbjct: 67  FDFDQSILRADARSALMVYAEVLKAAPKSVRLEGHADER---GTREYNMALGERRANAVR 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338
             L+  GV    I  +S +   R     +S+   + NRR++I++
Sbjct: 124 DFLILQGVDSSLIETVS-YGEERPAQMGSSESSWAMNRRVEIVL 166


>gi|86133789|ref|ZP_01052371.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85820652|gb|EAQ41799.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 279

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +++  R     +   NS + ++         +   +       +K     +        K
Sbjct: 45  QEEIDRRVEMYYDKINSLKDDNANLEEENALKFDVNSDNIVISDKGRAIMDATLAKVDPK 104

Query: 181 EKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +   A   K  L   L+  I +   G         +  +   T ++IS+ D+    +F+ 
Sbjct: 105 KLAEAKTLKDSLNLALSYNIITQTLGEAELLNSDELDIDIDETVVMISVSDKL---LFNT 161

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQ 297
            S       + ++ KI ++        I I GHTD+    N   +DNW LS+ RA S  +
Sbjct: 162 GSYRVKESALSLITKIADIAESEPSIDIMIEGHTDSQSISNATVQDNWDLSVKRATSIVR 221

Query: 298 VLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +L     +   R+   SG       + +      + NRR  I++ 
Sbjct: 222 LLQNKFKIDGSRLIA-SGRGDTVPLLPNTSSENRAKNRRTRIVIL 265


>gi|85704170|ref|ZP_01035273.1| flagellar motor protein [Roseovarius sp. 217]
 gi|85671490|gb|EAQ26348.1| flagellar motor protein [Roseovarius sp. 217]
          Length = 563

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 16/192 (8%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +S+  E N  L  ++ E+      ++    L +     L    ++   +       + G+
Sbjct: 373 QSLGNELNTALARVAAEERRRRIAEEERARLLEAEKEDLEKYRSEFFGRLRDVLGQQEGV 432

Query: 225 LI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDA 274
            I        +  +F    +         + K+  +L +           V+ + GHTD 
Sbjct: 433 QIVGDRFVFSSEVLFAPGEAELSLAGEGEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDD 492

Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNS 329
            P        DNW LS  RA S  + L    G   +R+S  +G+   +     D     +
Sbjct: 493 VPIVEGARFADNWALSQARALSVVRYLTGVLGFPAERLSA-NGYGEFQPVNPDDTAAARA 551

Query: 330 ANRRIDILVEDR 341
            NRRI++ +  R
Sbjct: 552 QNRRIELKLTTR 563


>gi|148652191|ref|YP_001279284.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148571275|gb|ABQ93334.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
          Length = 403

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
           + +     + + I D+    +   FD   S+   +    + K+ E +        SI GH
Sbjct: 260 VVDENGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIEGH 319

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA 330
              +     AR N RLS  RA +   +L    GV+ +R+S + G+ + R    +D     
Sbjct: 320 ASKTGP--SARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTV-GYGYDRPIAPNDTEEGR 376

Query: 331 --NRRI 334
             NRR+
Sbjct: 377 AMNRRV 382


>gi|88705612|ref|ZP_01103322.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
 gi|88700125|gb|EAQ97234.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
          Length = 181

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  S+   P     +     +L  +   + + GHTD          N  L   RA +  
Sbjct: 83  FEFDSATLTPAAQAAVDAHIALLKTNDRSVRLDGHTDER---GTRDYNMALGERRANAVR 139

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             ++ +GV+  RI  +S +   +     + +   S NRR+++
Sbjct: 140 DYMVVNGVASYRIETVS-YGEEQPVAYGSGESSWSQNRRVEL 180


>gi|46201868|ref|ZP_00208284.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 262

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 8/122 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIAR 282
            I+ +   N   FD  S   L     V+  I  +++   +   I + GHTD+        
Sbjct: 13  QIARVSFSNQIFFDSDSDRILKSGESVIGAISRLISADQTKPHIMVIGHTDS---SGGDL 69

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            N  LS  RA +    L+  GV  + I  + G    +   ++      + NRR++ L+  
Sbjct: 70  YNLELSRRRAEAVAAQLVLQGVPHEHIQLV-GMGKSQPVASNSTAAGKAQNRRVEFLISA 128

Query: 341 RQ 342
           R+
Sbjct: 129 RR 130


>gi|262281579|ref|ZP_06059357.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
 gi|262256955|gb|EEY75695.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
          Length = 159

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD +++         L ++   L       + I GHTD       A  N +LS +
Sbjct: 52  PERLLFDFNNAELKQSHEAELVRLASQLNKYDLNKLKIVGHTDDV---GDAAYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I+V
Sbjct: 109 RAQSVANLFLARGFKQENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157


>gi|260898695|ref|ZP_05907191.1| flagellar motor protein MotB [Vibrio parahaemolyticus Peru-466]
 gi|308086893|gb|EFO36588.1| flagellar motor protein MotB [Vibrio parahaemolyticus Peru-466]
          Length = 155

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 11/150 (7%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              D  P  L  W   +AD M++LM FF+++   +  D    K I               
Sbjct: 6   NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K  F  QN  E     K    I +       +        ++     +  + +       
Sbjct: 55  KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                        G+    ST   +S   +
Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQSAESD 144


>gi|117620195|ref|YP_854667.1| putative outer membrane lipoprotein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561602|gb|ABK38550.1| inner membrane lipoprotein YiaD [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 218

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        +++++    N   FD SS+         L  +  
Sbjct: 78  YMDVQEAKLREKLQGTGVSVTRNGDQLILNM---PNNVTFDSSSAQLKAAGANTLSGVAM 134

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V+    +   ++ GHTD++        N +LS  RA +    L+  GV+  RIS  SG  
Sbjct: 135 VVGEFDKTRLNVVGHTDST---GSRELNMKLSAQRADAVAAQLIGQGVTGSRIST-SGVG 190

Query: 317 HHRLKIASDPMN--SANRRIDILVE 339
             +    +      + NRR+ I + 
Sbjct: 191 PDQPVATNSTAEGKAQNRRVTITLT 215


>gi|317486290|ref|ZP_07945122.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
 gi|316922460|gb|EFV43714.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
          Length = 340

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        PE   +L +   ++     +   + G TD+         N +LS  RA + 
Sbjct: 239 FAFDKYDLTPEAQGILNEAARIIMEHPNMKVQLLGWTDSI---GTDAYNLKLSQRRADAV 295

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+  GV   R+  I G      +  ++       NRR +++  D
Sbjct: 296 KNYLVAQGVPASRMIAI-GKGKSF-RYDNNTEEGRYMNRRTELVFMD 340


>gi|315223432|ref|ZP_07865289.1| OmpA family protein [Capnocytophaga ochracea F0287]
 gi|314946605|gb|EFS98596.1| OmpA family protein [Capnocytophaga ochracea F0287]
          Length = 290

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           R   +   +  +L G++ +   + V     +  + I+I D+    +F   S         
Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDIRVEKGVVFINISDKM---LFSSGSYTISKNAKS 173

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSED 307
           VL+K+ +V+ +  +    + GHTD    +    RDNW LS+ RA    +VL K  GV+ +
Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           R++   G +++    ++      + NRR  I+V  +
Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVVLPK 268


>gi|262402450|ref|ZP_06079011.1| outer membrane protein [Vibrio sp. RC586]
 gi|262351232|gb|EEZ00365.1| outer membrane protein [Vibrio sp. RC586]
          Length = 223

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  SS          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  ++        NRR++I + 
Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220


>gi|152993615|ref|YP_001359336.1| hypothetical protein SUN_2037 [Sulfurovum sp. NBC37-1]
 gi|151425476|dbj|BAF72979.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 232

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 68/159 (42%), Gaps = 13/159 (8%)

Query: 189 KKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            ++  D+A+ + + ++      +   + ++       + I   D+    MF   SS    
Sbjct: 74  DQQANDIARSLGTGVNNDPLAYLDPNQDLIVSNNGRYVKIMFRDRM---MFPTGSSRLTS 130

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                + K+G++L    + I  + G TD          N+RLS +RA +    L + G++
Sbjct: 131 SASYKVGKVGKILREYPQTIVQVAGFTDDR---GGYDYNYRLSRNRAKTVSDRLYREGIN 187

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               S ++G ++++  + ++     + NRR++I +    
Sbjct: 188 NP--SYVTGCSYNKPLVPNNSERNMALNRRVEIYLYPNN 224


>gi|329900833|ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549361|gb|EGF33931.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 214

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  P+    L  +   L      + I  GHTD+         N +LS+ R+ +    L+ 
Sbjct: 114 VLKPDGKAKLDDLASKLQGMNLEVIIAVGHTDSV---GSDAYNQKLSVRRSEAVKAYLVS 170

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            G+  +R+    G    +    +      + NRR++I V   +
Sbjct: 171 KGIEANRVYT-EGKGEKQPVADNKSAAGRAKNRRVEIEVVGTR 212


>gi|218886501|ref|YP_002435822.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757455|gb|ACL08354.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 194

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 15/167 (8%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              +++ + A     ++ D            +       +               +    
Sbjct: 40  AGGAEQSLAAANESTQVTDRPAPPRVMPQQEIDRVFGSTLAAMPEPP--------KSFLL 91

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F   S+ P P +   L +  + +       +S+ GH+D+         N +LS+ RA +
Sbjct: 92  YFPTGSTEPEPTSRPALDEAADNIKCRAVSNVSVIGHSDS---AGDPAANQKLSMARAEA 148

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             ++L   GV    +  +SG   +   + + P    + NRR++ILV 
Sbjct: 149 VRRMLEARGVPAGAM-ALSGHGANDPLVPTAPGVAEARNRRVEILVR 194


>gi|120602698|ref|YP_967098.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120562927|gb|ABM28671.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311234162|gb|ADP87016.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 344

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L +  K +   +  +  D              I++          F  +S+       
Sbjct: 202 ADLLNNEKALDKFVRDVFYDEQAPKAAAAPMEEVIVLR------NVQFALNSAKLDASAT 255

Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +   ++  +      + GHT           N +LS  RA S    L+K GV   R
Sbjct: 256 SILTEAARIIKANPGKKLLVAGHTCNL---GTDAYNLKLSDARAKSVKDFLVKQGVEASR 312

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           +    GF   + K  +        NRR+++
Sbjct: 313 LDTF-GFGESQPKYDNGTEQGRSMNRRVEL 341


>gi|152996565|ref|YP_001341400.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150837489|gb|ABR71465.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 209

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 8/168 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           + E + A   + RL D  +        L         +           ++      +FD
Sbjct: 22  AAESLYASNVQSRLADADRDGVIDARDLCPGTTEGAAVDNYGCPNQTTKLLSVELNILFD 81

Query: 239 KSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              +         L+ + + L       + I GHTD+      A  N  LS  RA +   
Sbjct: 82  TGKADIKQRFYSELKDLAKFLKEHPASTVVIEGHTDSQ---GSAELNQELSQQRASAIAD 138

Query: 298 VLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           VL+ S  +  DR+  I G+   R    +D  +    NRR+   V  +Q
Sbjct: 139 VLVDSFRIQADRVKGI-GYGATRPIADNDTEDGRKLNRRVVAEVFAKQ 185


>gi|297748730|gb|ADI51276.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-EC]
 gi|297749610|gb|ADI52288.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-LC]
          Length = 202

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETI-VVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E    +L  +   L       + I GHTD       A  N  L   RA +
Sbjct: 98  FATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDER---GAAAYNLALGARRANA 154

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G++ DR+  IS +          ++     NRR +  +  R
Sbjct: 155 VKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKIHAR 202


>gi|262369124|ref|ZP_06062453.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316802|gb|EEY97840.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 216

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L       GV       G +  I+       FD + S   P     L K+ +
Sbjct: 75  YLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIM--PGNITFDTNKSNIKPNFYSTLNKVAQ 132

Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +   I + G+TD++        N  LS  RA S    L   GVS  RI+   G  
Sbjct: 133 TLTEDNKSGILVTGYTDST---GNDSINIPLSQARAQSVASYLASQGVSTTRINA-QGQG 188

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                 ++        NRR++I +
Sbjct: 189 SANPIASNATAEGREQNRRVEISI 212


>gi|167614763|ref|ZP_02383398.1| unnamed protein product; Similar to putative exported protein
           [Burkholderia thailandensis Bt4]
          Length = 560

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F    +   P       +     +LA+  + + I GH+D+         N +LS  RA 
Sbjct: 443 LFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 499

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +     +  GV + R   + G         +      + NRR++IL+   
Sbjct: 500 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILLIPD 548


>gi|270047795|pdb|3KHN|A Chain A, Crystal Structure Of Putative Motb Like Protein Dvu_2228
           From Desulfovibrio Vulgaris.
 gi|270047796|pdb|3KHN|B Chain B, Crystal Structure Of Putative Motb Like Protein Dvu_2228
           From Desulfovibrio Vulgaris
          Length = 174

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 64/159 (40%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++ ++   +  +   +    + +   +        I + +    +  +F   +    P 
Sbjct: 9   QRELIEAQRQTYNEXRTYFTVNGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPG 65

Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304
              VL  + +  +    + I+I+G TD       AR  DNW +S  R+ +  +  + +G+
Sbjct: 66  ADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI 125

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
              R++  +G         +  D   + NRR++ ++E R
Sbjct: 126 EPARLTA-TGLGELDPLFPNTSDENRARNRRVEFVLERR 163


>gi|170723153|ref|YP_001750841.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
 gi|169761156|gb|ACA74472.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
          Length = 165

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163


>gi|194014658|ref|ZP_03053275.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
           7061]
 gi|194013684|gb|EDW23249.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
           7061]
          Length = 254

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 10/206 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           +Q     N +        D       E++ N  +        +E     +    L  + K
Sbjct: 48  EQMAKSFNVVFTGGTGVMDQTSMQSTEETENSNQTKKAAEEDEEAQAKARDHAVLTKVKK 107

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++ S ++      +   +  + T  G+LI+I D      FD   +I  P+ + + ++I +
Sbjct: 108 QVDSFIAN---KKLGAKLETKLTDEGLLITIEDS---IFFDSGRAIIRPQDVPLAKEISK 161

Query: 258 VLAHSTEVISI-RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           +L  +     +  GHTD  P RN     NW LS  RA +   +L+++           GF
Sbjct: 162 LLVINPARDIVISGHTDNVPIRNSEFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGF 221

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
              +   ++D       NRR+++L+ 
Sbjct: 222 GEFKPIASNDTAEGRSKNRRVEVLIL 247



 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + +K+   D   +   SW I YAD +T+L+A F+V++  ++ D    + + + FN     
Sbjct: 1   MARKRKKHDHDDHVDESWLIPYADLLTLLLALFIVLFASSSIDAAKYEQMAKSFN----V 56

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLS 101
           + T   G+ D+ +          + +
Sbjct: 57  VFTGGTGVMDQTSMQSTEETENSNQT 82


>gi|288818260|ref|YP_003432608.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
 gi|288787660|dbj|BAI69407.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
 gi|308751857|gb|ADO45340.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6]
          Length = 334

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 10/275 (3%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F    ++ + +        N   ++      L     ++    +   G +  +   + + 
Sbjct: 63  FLASEQDGIGSKMFAIKSMNSASKALGGLKGLDSLNLLSHQEFEKLTGLSIAEVNERLMY 122

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                  +    E  K  +  D+   +   +  +    +    +     L  ++ L    
Sbjct: 123 LRENKGESCAPKELAKAEVAYDALVYEASKEQINQMVLLKLYNDAVNNSLLAKEKLDSAI 182

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + +L+    K+   ++        +  + +       + +  + +   FD        E 
Sbjct: 183 ESKLECYTGKVELPVALKEEPKEQEEKVEKKMPQEEPLMVSARIH---FDFDKYSIKREY 239

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           I +L ++ + L  +    + I G+TD          N +L++ RA +    L+K G+ E 
Sbjct: 240 IPLLNEVVKTLKENPNVRVRIEGYTDNI---GTKAYNDKLAMKRAKAVKDYLVKHGIEES 296

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RI  + GF   R   +++       NRR D ++  
Sbjct: 297 RIDTV-GFGKERYIASNETAIGRFTNRRADFIILR 330


>gi|33598186|ref|NP_885829.1| putative outer membrane protein [Bordetella parapertussis 12822]
 gi|33566744|emb|CAE38956.1| putative outer membrane protein [Bordetella parapertussis]
          Length = 208

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I    +   FD   S   P  + VL  +   L    E    + GHTD+
Sbjct: 85  VVEMPDGSLKVNI---PSNVSFDTDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDS 141

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +     A  N +LS++RA +    L K GV++ R+  + G   +     +        NR
Sbjct: 142 T---GSAAHNQQLSVNRARAVTSYLGKQGVAQGRM-TVEGRGANDPVGDNATAEGRAANR 197

Query: 333 RIDILV 338
           R+++ +
Sbjct: 198 RVEVYL 203


>gi|320352974|ref|YP_004194313.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320121476|gb|ADW17022.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 359

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           N  +FD   +   PE    L ++G +L  +  V  +  G  D+         N RLS  R
Sbjct: 250 NNILFDFDKAFIRPEHHAQLDQLGRLLVANPHVYVVLSGFCDSL---GSEAYNIRLSQRR 306

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A S  + L K   + +DRI  +  + +     ++        NRR+ I++   +
Sbjct: 307 AESVRRYLQKKFTIKKDRIL-LYWYGYANPVASNATEEGRQLNRRVTIVLRGTR 359


>gi|187929080|ref|YP_001899567.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
 gi|187725970|gb|ACD27135.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
          Length = 167

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 10/162 (6%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           + L+ +  K+ + L+++I+  L+    +     V   T    I IS         F    
Sbjct: 2   EALSAQLAKQRESLSERIARALAP---EAGAAPVGISTKDDRIYISFNSDEG---FASGR 55

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM 300
           +  +      L ++  VLA +   +++ GHTD +P        N  LS  RA +  + L 
Sbjct: 56  ADLMLMLARQLDRLATVLADTRGKVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQ 115

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           + G++ DR+  I G         +        NRR++I++E 
Sbjct: 116 ERGIASDRL-SIIGRGVKDPVGDNRTAAGRALNRRVEIILES 156


>gi|91779292|ref|YP_554500.1| hypothetical protein Bxe_B0804 [Burkholderia xenovorans LB400]
 gi|91691952|gb|ABE35150.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 215

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L  + E++ + G TD    R       DNW LS 
Sbjct: 93  FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNADEQGRARNRRVEI 200


>gi|78223039|ref|YP_384786.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78194294|gb|ABB32061.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 523

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 81/281 (28%), Gaps = 19/281 (6%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           + +  Y  P  +           ++  P +      I   +   +   +   K+  T + 
Sbjct: 249 QGVGSYVKPVPRLGQGLDPLDEQKKKEPVKIRKIIPISSLLVSSLAPQAPANKLEVTVEP 308

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            + +        ++ S Q    K   +   E+        ++  +           L   
Sbjct: 309 GKEEITIKPYGQVTISAQPAAAKAVSSATLEEVSLTQGGEEVRLASRVSGTLENSALEYT 368

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                          K  +  ++     +I   +          ++         FD   
Sbjct: 369 LARLEGITPLYSVDVKGQNVQVASARDGDIADSMKVYRKFRFPDVT---------FDFDQ 419

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
                E    + ++ E++   T+ +   + G+TD          N  LSL RA S    L
Sbjct: 420 WSLSAEGKKSISEVAELVRKDTKWVYLRVDGYTDNI---GSTDYNMDLSLKRAVSVASYL 476

Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +   G+   +I  I G    +    +   +    NRR +IL
Sbjct: 477 VAREGIDAAKIF-IKGLGKSKPLADNATSDGRKLNRRCEIL 516


>gi|222106979|ref|YP_002547770.1| OmpA-type porin [Agrobacterium vitis S4]
 gi|221738158|gb|ACM39054.1| OmpA-type porin [Agrobacterium vitis S4]
          Length = 511

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 8/186 (4%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             ++  +  ++   E    P +++++      K        ++ + ++ L  +   K V 
Sbjct: 290 PHEAPGVMITVPVPEPQPQPTVAQQEPEPQPVKPPEPPPPSRLKNLITFLQPEVEKKLVS 349

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
                  + + I    N+ +FD  S+    +   +LQ+IG  LA       + G+TD  P
Sbjct: 350 LSDANGRLRVRIN---NSGLFDTGSADVKGQFRDLLQRIGGALAAEKFRAVVIGYTDNVP 406

Query: 277 FRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
            +      NW LS  RA +  ++L      +  ++   G A       +D       NRR
Sbjct: 407 IKTVQFPSNWHLSEARAKAVGEILSSFTGPDAILT--EGRADSDPIAGNDTPEGREMNRR 464

Query: 334 IDILVE 339
            +ILV 
Sbjct: 465 TEILVL 470


>gi|296156377|ref|ZP_06839215.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295892976|gb|EFG72756.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 215

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L  + E++ + G TD    R       DNW LS 
Sbjct: 93  FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNADEQGRAKNRRVEI 200


>gi|284040044|ref|YP_003389974.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283819337|gb|ADB41175.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 668

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 79/299 (26%), Gaps = 10/299 (3%)

Query: 48  FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           F+       T  +               + T     F   N       + I    +    
Sbjct: 373 FVATRSGGVTRVENMGQPINSPADDFGLIYTDPTKGFMASNRGGGKGDDDIYFFQEGPSV 432

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
            ++  ++    N  K  +         + +         +    +            +  
Sbjct: 433 DSTTIVQTPPANAPKIVRYFIAGTVSANETPIVPLDSARVRILDDATGQPIAEATTGQPG 492

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              +           +   +     ++       ++  +          F         +
Sbjct: 493 TFGKYPLQEGKDYTILAERRGYLTRREQFTMQGKSIPAIFLTKAQTDTTFNVALLLDRAT 552

Query: 228 IIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           +          +D       P+    L K+  +L  +    I +  HTD    R     N
Sbjct: 553 LNKTFVLENIYYDLDKFNIRPDAAEELDKLVTILKDNPTLKIELSSHTD---VRAPDAYN 609

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340
            RLS +RA SA   ++  GV   R+    G+   +L + +   +  +  NRR +  + +
Sbjct: 610 MRLSQNRAKSAVDYIVSKGVDASRMIA-KGYGETQLIVKNAKTEEEHQRNRRTEFKILE 667


>gi|325107821|ref|YP_004268889.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
 gi|324968089|gb|ADY58867.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 280

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 22/253 (8%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC--KSTDLEKSI 167
           ++     +T  ++Q +  ++    L   QQ    +N        G             ++
Sbjct: 16  ALSQTACNTPARRQLKMSQHRAMRLYAEQQMLEQENLQLAGQMHGYQQSMHAMAQERDAL 75

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            ++       L+  +           +L  +    L                    +   
Sbjct: 76  GQQLAQAESRLAISRQRLDNLLAERGELQGRYKDLLIKARTQQNPMSNEATRKFQELARK 135

Query: 228 IIDQRNTP-----------MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTD 273
             D    P           +F   S+        +L+ +  ++         + + GHTD
Sbjct: 136 YPDFEFDPYTGVSKFHADILFSSGSAELRDTAKPLLRDLAAIMNDGDARGLNLLVVGHTD 195

Query: 274 ASPF---RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN 328
             P    R     NW LS +RA S    L  SG+SE R+    G++ ++  +   +D   
Sbjct: 196 DQPIASARGTHPTNWHLSTNRANSVVLALKNSGISEHRMGAA-GYSLNQPLVPNTNDHSR 254

Query: 329 SANRRIDILVEDR 341
             NRR++I V   
Sbjct: 255 QRNRRVEIFVLAP 267


>gi|221197269|ref|ZP_03570316.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221203942|ref|ZP_03576960.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221176108|gb|EEE08537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221183823|gb|EEE16223.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 214

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P+   +L+     +   L    +++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDEGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|91976354|ref|YP_569013.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91682810|gb|ABE39112.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 434

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F++ S+     ++ VL+++  V+AH     I + GHTDA         N  LS  RA + 
Sbjct: 333 FERGSAEIEQASLPVLKQLAAVIAHCPAAQIEVAGHTDA---NGKKAANEALSKRRAEAV 389

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L K+G+   ++  + G+   +    +D   +   NRRI+  V+
Sbjct: 390 ADSLTKAGIGSAKLIAV-GYGSAKPLGPNDTAEARAKNRRIEFAVK 434


>gi|293393749|ref|ZP_06638056.1| OmpA family protein [Serratia odorifera DSM 4582]
 gi|291423576|gb|EFE96798.1| OmpA family protein [Serratia odorifera DSM 4582]
          Length = 220

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD  SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDTDSSTLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N  LS  RA      L+  GV+ +RI +  G  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GARAHNMTLSQQRADGVASALITQGVAANRI-RTQGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPIASNSTTEGKAQNRRVEITL 216


>gi|296137072|ref|YP_003644314.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
 gi|294341249|emb|CAZ89650.1| putative OmpA family protein [Thiomonas sp. 3As]
 gi|295797194|gb|ADG31984.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
          Length = 226

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 7/145 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L A     G   + T+T      ++      F   S+   P    +L+ + 
Sbjct: 80  QHLEKQKQDLQAQAQASGTGVQVTQTQDNRLKMNVPADAGFATGSAQLNPRMYPILESLA 139

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             L  +  E + + G TD +        N+ LS +RA +    L+  GV+  R++   G 
Sbjct: 140 TGLNQNPSETVQVFGFTDNT---GTDAINYPLSENRALTVKNFLVSRGVAPQRVTT-QGL 195

Query: 316 AHHRLKIASDPM--NSANRRIDILV 338
                  ++      +ANRR++I V
Sbjct: 196 GPQNPVASNATAQGRAANRRVEIYV 220


>gi|218461676|ref|ZP_03501767.1| flagellar motor protein MotB [Rhizobium etli Kim 5]
          Length = 75

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 56/74 (75%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           IRGHTD   ++    +NWRLS+DRA SAY +L++ G+ E RIS++SGFA  RLK+ ++P 
Sbjct: 2   IRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPAEPF 61

Query: 328 NSANRRIDILVEDR 341
           N+ANRRI+ILV+  
Sbjct: 62  NAANRRIEILVQAD 75


>gi|75674700|ref|YP_317121.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74419570|gb|ABA03769.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 463

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +    ++I +L ++ E  L   T  I I GHTD+      A  N  LS  RA + 
Sbjct: 361 FEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSD---GDASFNQTLSERRAQAV 417

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
              L+K+G+  +R + + G    +    +D     + NRRID +V  
Sbjct: 418 VDFLVKAGLPANRFTPM-GRGSAQPIATNDTDEGKAKNRRIDFIVRQ 463


>gi|13472147|ref|NP_103714.1| hypothetical protein mlr2348 [Mesorhizobium loti MAFF303099]
 gi|14022892|dbj|BAB49500.1| mlr2348 [Mesorhizobium loti MAFF303099]
          Length = 442

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 81/246 (32%), Gaps = 11/246 (4%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           +       +           + QR    I+ ++ +         +           + + 
Sbjct: 200 NADAEDAPLSPNWKGVIASDEPQRFIVPIWVMALAAVVVAAVAYIGLSMSLSSQAVELSA 259

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           L +++       +   + ++        +  D A   +       +           +  
Sbjct: 260 LVRTLPPASRADVARAAPKQDAPAPEPPQPVDFALLPAFKAEAPASLKDALSGTESVSLA 319

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPF-- 277
            ++I      N  +F  S          ++Q I +V+         I+I GHTD      
Sbjct: 320 KLIIQ---SSNPELFQSSRPTLSQGYEPLIQSIAKVILANQELIGNITIVGHTDNVRLQR 376

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            N    N RLS  RA +   +L+++GV ++RI    G A       +      + NRR++
Sbjct: 377 SNPLASNQRLSEARAQTIADLLVQAGVPQERIHS-EGRADSDPVADNSTREGRALNRRVE 435

Query: 336 ILVEDR 341
           +LVE R
Sbjct: 436 VLVEKR 441


>gi|115526883|ref|YP_783794.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520830|gb|ABJ08814.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 465

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +    +++ +L ++ E  +  S+ VI I GHTD       A  N  LS  RA + 
Sbjct: 363 FESGKATIDGDSLGLLDRLIETAMRCSSAVIEIAGHTDGD---GEAAANKALSERRAQAV 419

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
              ++K+G+  DR   + GF   +   +  +D   + NRRI+  V 
Sbjct: 420 VDYMVKAGLPADRFHPV-GFGSAQPVASNDNDEGKAQNRRIEFTVR 464


>gi|167750717|ref|ZP_02422844.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
 gi|167656396|gb|EDS00526.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
          Length = 339

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212
              +        + +   N   PP ++      ++ + L     ++ S L      +++ 
Sbjct: 59  NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269
           + V  E T T I I      NT MFD +S++   E   VL K    +       +  S+ 
Sbjct: 119 RYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVS 175

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328
           GHT  +       ++W LS  RA S  + +     V  ++   + G A +     +    
Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231

Query: 329 SA--NRRIDILVEDRQ 342
               NRR++I++   Q
Sbjct: 232 GRAANRRVEIMIVRAQ 247



 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               ++    G+W   YAD +T+L+ FF++++  ++ D+   + I Q F   G  +    
Sbjct: 3   KRRAESGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                  NP     Q K + +      +   + + G T  ++      +
Sbjct: 59  -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100


>gi|15605330|ref|NP_220116.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76789338|ref|YP_328424.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           A/HAR-13]
 gi|166154814|ref|YP_001654932.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
 gi|166155689|ref|YP_001653944.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|237803028|ref|YP_002888222.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237804949|ref|YP_002889103.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|255311421|ref|ZP_05353991.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276]
 gi|255317722|ref|ZP_05358968.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276s]
 gi|255348981|ref|ZP_05380988.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70]
 gi|255503520|ref|ZP_05381910.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70s]
 gi|255507198|ref|ZP_05382837.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           D(s)2923]
 gi|301336092|ref|ZP_07224336.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2tet1]
 gi|3329044|gb|AAC68202.1| Peptidoglycan-Associated Lipoprotein [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167868|gb|AAX50876.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           A/HAR-13]
 gi|165930802|emb|CAP04300.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
 gi|165931677|emb|CAP07254.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|231273249|emb|CAX10164.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274262|emb|CAX11057.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           B/Jali20/OT]
 gi|289525642|emb|CBJ15123.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           Sweden2]
 gi|296435206|gb|ADH17384.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis E/150]
 gi|296436135|gb|ADH18309.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9768]
 gi|296437063|gb|ADH19233.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           G/11222]
 gi|296437995|gb|ADH20156.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           G/11074]
 gi|296438925|gb|ADH21078.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
           E/11023]
 gi|297140497|gb|ADH97255.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9301]
          Length = 188

 Score = 92.3 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETI-VVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E    +L  +   L       + I GHTD       A  N  L   RA +
Sbjct: 84  FATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDER---GAAAYNLALGARRANA 140

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G++ DR+  IS +          ++     NRR +  +  R
Sbjct: 141 VKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKIHAR 188


>gi|289665938|ref|ZP_06487519.1| OmpA family membrane protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 438

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 12/158 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244
           L+ +A  I   +       +   +  E     + +             +  MF   S+  
Sbjct: 278 LERVALPIPEAVRPATTPALAPLLAAEQRAGLLTVQTEGDGRSTVRLASASMFPSGSAEL 337

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA S   VL  +G
Sbjct: 338 DADQTSLLERVAAALEQVPGRVVVVGHTDDQPVRSLSFKDNFALSARRAESVGAVL-AAG 396

Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           + + R  + SG    +        P   + NRR++IL+
Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|325287126|ref|YP_004262916.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324322580|gb|ADY30045.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 343

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    ++  V+ +I +++  + E  ISI GHTD       A  N +LS +RA + 
Sbjct: 242 FDTGKSRIKADSYEVISEISKMMKSNPELKISIEGHTDNV---GDASSNLKLSKNRAQAV 298

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
              +++ G++E R+    GF   +    +      + NRR+++
Sbjct: 299 LMAIVEEGINETRLKS-EGFGQTKPLDDNTTEEGKAQNRRVEL 340


>gi|317048731|ref|YP_004116379.1| DotU family type IV / VI secretion system protein [Pantoea sp.
           At-9b]
 gi|316950348|gb|ADU69823.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
           At-9b]
          Length = 412

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++++   +   +F   ++        V+Q+I   + + +  
Sbjct: 263 LKPEIDAGLVAVRDEADQSVVTL---KGDGLFTSGATTVRGRYEAVIQRIAAAMNNVSGK 319

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S   +L +      R+    G       + +
Sbjct: 320 ILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPARVKA-EGRGESNPLVPN 378

Query: 325 DPM--NSANRRIDILVE 339
                 + NRR++I + 
Sbjct: 379 TSAENRARNRRVEITLL 395


>gi|319955259|ref|YP_004166526.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319423919|gb|ADV51028.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 283

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 12/208 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL---QDLA 196
            +      + + E   ++   T L     +     L  L ++ +   K    +     + 
Sbjct: 63  EDQNAFLKSNNQELINNMGNLTTLSSKGAQNLEKSLESLQEKDLTIRKLNDAITRRDSVN 122

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +  +L G++ +   + +     +  + +SI D+    +F   S         VL K+ 
Sbjct: 123 LSLVQSLKGVLGNLDDEDIQISVEKGVVFVSISDKL---LFSSGSYNVTNRAKEVLGKVA 179

Query: 257 EVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKIS 313
           +V+ +  +    + GHTD  P+      DNW LS  RA +  ++L     V   R++  +
Sbjct: 180 KVVNNKPDFDFMVEGHTDDVPYNGGILLDNWDLSAKRATAIVRILQNDYNVDPKRMTAAA 239

Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341
             + +     +D   + NRR  I+V  +
Sbjct: 240 -RSSYVPVSTTD--KAKNRRTRIVVLPK 264


>gi|332519230|ref|ZP_08395697.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045078|gb|EGI81271.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 235

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   E    GI+++  D+ +   FD +       +   L K+  V     
Sbjct: 86  QAQKIEEEIPGAEVERVDDGIVVTF-DENSGVYFDTAKYNINAASQATLSKLIGVFREYP 144

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +    + GHTD+         N  LS +RAY+    L   G+S  R++  + F   +   
Sbjct: 145 DTNILVVGHTDSV---GSEDSNMTLSKNRAYAVTNYLTNQGISNARVTT-NWFGEGQPTN 200

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
            +      + NRR++I +   Q
Sbjct: 201 DNSTKEGRAKNRRVNIAIVPNQ 222


>gi|262375710|ref|ZP_06068942.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
 gi|262309313|gb|EEY90444.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
          Length = 217

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  FD + S   P     L K+ +VL   +   I + G+TD++        N  LS  
Sbjct: 108 PGSITFDTNKSNIKPNFYGTLNKVAQVLTEDNQSGILVTGYTDST---GNDSINLPLSQA 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    L   GVS  RI+   G         +        NRR++I V
Sbjct: 165 RANSVATYLAGQGVSRTRINA-QGLGSANPIADNTTAAGKEQNRRVEIAV 213


>gi|70732413|ref|YP_262169.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68346712|gb|AAY94318.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 252

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 10/146 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L A     GV  +     I + +        F   S+   P     L  +  
Sbjct: 86  YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYQPLNNLAN 142

Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +   I I G+TD++      + N  LS  RA S    L   GVS   +S   G  
Sbjct: 143 SLREFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGSNLSA-RGAG 198

Query: 317 HHRLKIASDP--MNSANRRIDILVED 340
                 ++      + NRR+++ ++ 
Sbjct: 199 PDNPIASNADVNGRAQNRRVEVNLKA 224


>gi|167565907|ref|ZP_02358823.1| hypothetical protein BoklE_25339 [Burkholderia oklahomensis EO147]
          Length = 215

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I    + +
Sbjct: 43  ELSSKLDAEVKQRQMETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P    +L+     +   L  + E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +    +  D   + NRR++I
Sbjct: 153 KRALTVTRAFIAEGVPASSVFAAA-FGSEQPVSPNSDDEGRAKNRRVEI 200


>gi|261821727|ref|YP_003259833.1| hypothetical protein Pecwa_2465 [Pectobacterium wasabiae WPP163]
 gi|261605740|gb|ACX88226.1| type IV / VI secretion system protein, DotU family [Pectobacterium
           wasabiae WPP163]
          Length = 413

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 57/137 (41%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++++   +   +F  +S+       VV++++ E + +    
Sbjct: 264 LKPEIDAGLVAVRDEADQSVVTL---KGDGLFASASTDVRGRYDVVIKRVAEAMNNVRGK 320

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323
           + + G++D  P R+     N+ LSL RA S   +L +      R++   G   +   +  
Sbjct: 321 VLVIGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPSRVTAA-GRGENHPLVPN 379

Query: 324 -SDPMNSANRRIDILVE 339
            +    + NRR++I + 
Sbjct: 380 TNAENRARNRRVEITLL 396


>gi|269119353|ref|YP_003307530.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
 gi|268613231|gb|ACZ07599.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
          Length = 178

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++++   +I++    L+ +        E      +I + + +    FD   S   PE  
Sbjct: 25  KQMRNDTIRINAMEVELINEKTEPAEKKEVKEEKKVIRLGEDKLY--FDFDDSRVKPEYY 82

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
             L+   EV+ +S+  ++I G+TD+   +  A  N +LSL RA +    LM+ G++E+ I
Sbjct: 83  GELRAAAEVIKNSSMRVNITGYTDS---KGSAEYNEKLSLRRAEAVKAKLMEFGLNENYI 139

Query: 310 SKISGFAHHRLKIASD--------PMNSANRRIDILV 338
           + + G         +            + NRRI++ +
Sbjct: 140 AGVRGLGESNPIAPNTKSDGKDNPEGRAKNRRIELEL 176


>gi|228474110|ref|ZP_04058851.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228274624|gb|EEK13465.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 668

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DS++ +   K+ +   + +  +N      +   + A K    + +    I          
Sbjct: 475 DSQQKEITRKTNEANGTFDFGKNPVDCDDTFVFVRAQKEDYAVAEEQINIRQNGEIHQEI 534

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-I 268
            +       T    +            FD   S   P+  V L KI EV+     +   I
Sbjct: 535 FLKSIKKKVTVGDDLAKFF--NIEIIYFDFDKSNIRPDAAVDLAKIVEVMKEHPTIKIAI 592

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-- 324
           + HTD+         N  LS  RA S  + +++ G+   R++   G+   +L    ++  
Sbjct: 593 KSHTDSR---GSDAYNLALSDRRAKSTLEWMVQQGIDRSRLTA-KGYGETQLVNGCSNGV 648

Query: 325 ---DPMNSANRRIDILVED 340
              +  +  NRR + ++ +
Sbjct: 649 PCSEEEHQKNRRSEFIITE 667


>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
 gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
          Length = 383

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 9/102 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ S     PE   V+    ++L      I + GHTD+       + N  LS  RA    
Sbjct: 287 FNSSKIKTSPELTNVVV---QLLQTKEGDIEVIGHTDSL---GSKKYNQWLSEKRAQVVA 340

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
             L+K GV   RI  + G        +++     + NRR+ I
Sbjct: 341 DYLVKEGVDPSRII-VKGEGESSFVSSNETAEGRAKNRRVKI 381


>gi|187251342|ref|YP_001875824.1| outer membrane protein [Elusimicrobium minutum Pei191]
 gi|186971502|gb|ACC98487.1| Outer membrane protein [Elusimicrobium minutum Pei191]
          Length = 217

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
           +N  +F   S+    + I  +  + +V       +I + GHTD++     A  N  LS +
Sbjct: 99  KNDILFATGSAELSSQAINDIAAMSKVFKKYPYNIIVVEGHTDST---GSASFNQTLSEN 155

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA + Y  L+ + V    I    G+       ++D     + NRR+ + ++  +
Sbjct: 156 RARAVYNQLIANNVKTYSIG-YRGYGASNPIASNDTAAGRAQNRRVTLNIKADK 208


>gi|167035188|ref|YP_001670419.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
 gi|166861676|gb|ABZ00084.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
          Length = 166

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164


>gi|119477093|ref|ZP_01617329.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [marine gamma proteobacterium HTCC2143]
 gi|119449456|gb|EAW30694.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [marine gamma proteobacterium HTCC2143]
          Length = 363

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 8/194 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
             + K    + D +   +   +      +     A+  +    D      +       D 
Sbjct: 170 GGEKKAAPMAIDGDADSDGVTDSNDQCPTTPAGAAVDARGCALDSDNDGVADYQDACLDT 229

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-R 269
                + E     +L    +      F   SS         +  + E +       S+  
Sbjct: 230 PAGRQVDERGCKYVLKRTEEVSLNVNFASDSSAVEGNYTSEISNVAEFMKKFAGATSVIE 289

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
           GHTD +     A  N  LS  RA +   VL+   G+S +R+S   G+   R    +D + 
Sbjct: 290 GHTDDT---GSAIYNETLSQKRANAVMNVLVNRFGISAERLSA-KGYGEARPIQDNDSVE 345

Query: 329 SA--NRRIDILVED 340
               NRR+  +++ 
Sbjct: 346 GRRANRRVVAVIKA 359


>gi|297537693|ref|YP_003673462.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297257040|gb|ADI28885.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 224

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F    +   P    +L      L  +    ++I GHTD++        N  LS
Sbjct: 104 DIPSDISFAVGRADVQPNFRAILDTFANGLVTNPNSNVTIIGHTDST---GSDAVNNPLS 160

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           L+RA S    L    V+ +RI  I G       +A+D     + NRR++I 
Sbjct: 161 LNRAASVRDYLTSKRVASNRI-TIDGRGSREPLVANDTAANKAKNRRVEIF 210


>gi|86134861|ref|ZP_01053443.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85821724|gb|EAQ42871.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 234

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           KR+ + AKKI + + G   + +  G++             D+ +   FD + S    ++ 
Sbjct: 81  KRMDEQAKKIETEVPGAKVERVDDGIVVT----------FDENSGVYFDTNKSNINTKSQ 130

Query: 250 VVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L ++ +  L      I + GHTD +     A  N  LS  RA S    L+  G++  R
Sbjct: 131 QTLDRLAKVFLEFPDTKILVVGHTDNT---GNADYNLTLSEKRAKSVTNYLISDGIASPR 187

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              +  +   + K  +      + NRR+++ +   +
Sbjct: 188 FQTL-WYGEAQPKYDNSTAEGRAKNRRVNVAIVPNE 222


>gi|319796493|ref|YP_004158133.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315598956|gb|ADU40022.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 219

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD   +   P    VL +    L ++    + I GHTD++        N  LS+D
Sbjct: 107 PSDVSFDVGRANIKPNFAPVLDQFASGLRNNPNAEVRIIGHTDST---GSDAINNPLSVD 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           RA S    L+  GV+     +I G   H     +  D   + NRR++I V +R
Sbjct: 164 RAASTRDYLVARGVNAAAF-RIEGRGSHEPVADNNSDAGRAQNRRVEIYVGER 215


>gi|260642406|ref|ZP_05415772.2| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
 gi|260622249|gb|EEX45120.1| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
          Length = 260

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 12/156 (7%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
               ++  +  +    V+ +        + ++     +  +F   ++   P     L K 
Sbjct: 97  KMDKAAAEAKQIEGAQVEQITDNNGLKAVKVTF---DSGILFTTGNASLSPAAKSALSKF 153

Query: 256 GEVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDR 308
              +   +    +SI G+TD   +RN   +     N  LS +RA S    L+  GVS ++
Sbjct: 154 ANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQ 213

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           I  + G        ++D       NRR+++ +   +
Sbjct: 214 IKGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 249


>gi|197117628|ref|YP_002138055.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
 gi|197086988|gb|ACH38259.1| OmpA family outer membrane protein, OprF domain-containing protein
           [Geobacter bemidjiensis Bem]
          Length = 434

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   P+    L+ + + L        +  GHTD          N +LS  RA + 
Sbjct: 328 FDTNKADLKPQYRPELKALADFLNEFPNATGVIEGHTDNV---GPKALNMKLSQSRADTI 384

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
              L+K  G++ +RI  + G+   +   ++      + NRRI+
Sbjct: 385 RNSLIKEFGIAPERIKAV-GYGPTKPVASNKDKAGKAKNRRIE 426


>gi|49081460|gb|AAT50132.1| PA0973 [synthetic construct]
          Length = 169

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 69  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R           + NRR+++
Sbjct: 126 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 166


>gi|262378528|ref|ZP_06071685.1| OmpA/MotB [Acinetobacter radioresistens SH164]
 gi|262299813|gb|EEY87725.1| OmpA/MotB [Acinetobacter radioresistens SH164]
          Length = 485

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        +L +   +L     V+ +++GHTDA         N  LS+ RA + 
Sbjct: 365 FASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAE---GSEAVNNNLSVQRAQAV 421

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+  GVS  ++  + G+   +    +        NRRI+  + +
Sbjct: 422 VNYLVSRGVSPSKLQAL-GYGQDQPVTDNATSQGKFQNRRIEFEILN 467


>gi|225025598|ref|ZP_03714790.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
           23834]
 gi|224941636|gb|EEG22845.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
           23834]
          Length = 183

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 19/185 (10%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           + ++ +   N   P   ++          L      +S+  S L +      +    T  
Sbjct: 1   MPQTASDASNASAPAADEQASAVASASSALSAQGNSLSAQGSNLSSQGSG--LSATETGF 58

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIA 281
            I I++       +FD   +   PE    LQK  +++      VI I GHTD+   +   
Sbjct: 59  NIEINLSSD---VLFDFDKAELKPEADADLQKAADIIRQKGQGVILITGHTDS---KGSD 112

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRR 333
             N RLSL RA +        G+ ++   ++ G    R    +            + NRR
Sbjct: 113 AYNQRLSLARAQAVKNWFEAKGLQQN--YQLEGLGATRPIAPNTHPDGSDNPEGRAQNRR 170

Query: 334 IDILV 338
           ++I+V
Sbjct: 171 VEIIV 175


>gi|46579833|ref|YP_010641.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449248|gb|AAS95900.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 357

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L +  K +   +  +  D              I++          F  +S+       
Sbjct: 215 ADLLNNEKALDKFVRDVFYDEQAPKAAAAPMEEVIVLR------NVQFALNSAKLDASAT 268

Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +   ++  +      + GHT           N +LS  RA S    L+K GV   R
Sbjct: 269 SILTEAARIIKANPGKKLLVAGHTCNL---GTDAYNLKLSDARAKSVKDFLVKQGVEASR 325

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           +    GF   + K  +        NRR+++
Sbjct: 326 LDTF-GFGESQPKYDNGTEQGRSMNRRVEL 354


>gi|34541639|ref|NP_906118.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
 gi|5081699|gb|AAD39495.1|AF145799_1 immunogenic 23 kDa lipoprotein PG3 [Porphyromonas gingivalis]
 gi|34397957|gb|AAQ67017.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
          Length = 223

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+      L A      +        IL++     +  +F  +SS   P +   L K  
Sbjct: 70  KKMDKQKKELEAAVPDATIQTVNDGEAILVTF---DSGILFATNSSTLSPNSRTALTKFA 126

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +  + +  I I GHTD +      + N  LS  RA S Y  L   GVS  R+    G 
Sbjct: 127 ANMNKNPDTDIRIVGHTDNT---GSDKINDPLSERRAASVYSFLNSQGVSMSRM-AAEGR 182

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
             H     +  +     NRR+++ + 
Sbjct: 183 GSHEPVADNSTVAGRSANRRVEVYIL 208


>gi|254511628|ref|ZP_05123695.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221535339|gb|EEE38327.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 634

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 87/307 (28%), Gaps = 23/307 (7%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +     T+      I         ++      +      PE    N +          
Sbjct: 307 ITLVAAQDTNPLLFDRIVGELENALPDVFVLHAVL------PEPEPDNPVGPVEFTATRS 360

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
               +++      +  + + ++    +   +  +    +  D      +     L+   +
Sbjct: 361 PEGLVQLRGRVGDETLRDMADSFARAAFGSEQVYTATRIASDLPADWPVRVLAGLDALSH 420

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD----------NIVKGVLFE 218
                         +  +      +     + S   G   D                  +
Sbjct: 421 LHNGALTVTSDNVSLRGVSHDPEARAQIAGMLSDKLGDAQDFTLAITYHEPPPPADAPPD 480

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
                  I+ + Q +   F+  S+  + ++   L +I ++L     +   I+GHTD+   
Sbjct: 481 PEICEEQIAEVQQGSKIAFEPGSATVVADSRAALDQIADILRECGPIRLEIQGHTDSQ-- 538

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                 N +LS  RA S    L    V     S + G+        +D  +    NRRI+
Sbjct: 539 -GREEMNQQLSQARAQSILNELRGRRVPTSSFSAV-GYGETLPIADNDTEDGREANRRIE 596

Query: 336 ILVEDRQ 342
            L+   +
Sbjct: 597 FLLIRPE 603


>gi|104782507|ref|YP_609005.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95111494|emb|CAK16214.1| putative outer membrane protein, OmpA family [Pseudomonas
           entomophila L48]
          Length = 257

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 84/242 (34%), Gaps = 14/242 (5%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
               T  S  L            + E++      +QQ++         S   +   +   
Sbjct: 19  GCAATPESPRLVEAREAFSALQGKPESHRIAALETQQAQAALGKAEEASLVSRKSPEVEQ 78

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           L    N+        +      A  R    +    ++    + L   N +K +  + T  
Sbjct: 79  LAYLANRRIETAEETIRLRTAEAGMRGIEARRAEARLEVRTAQL---NALKALKGKETDR 135

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA 281
           G +++  D     +FD   +     +   +Q++ + L  + E    + G TD++      
Sbjct: 136 GTVVTFGD----VLFDTGRAELRSHSHDDIQRLAQFLRDNPERKVRVEGFTDST---GGD 188

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             N RLS +RA +    L + GV   RI    G+       ++   +S   NRR++++V 
Sbjct: 189 ALNLRLSENRAAAVAHALRRQGVDPARIVSA-GYGKASPVASNADAHSRQLNRRVEVIVS 247

Query: 340 DR 341
             
Sbjct: 248 RD 249


>gi|308126360|ref|ZP_07663727.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
 gi|308109365|gb|EFO46905.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
          Length = 161

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAY 293
           MF +  +   P    +L  +  +    T  + I GHTDA PF+     + NW LS  RA 
Sbjct: 1   MFSRGGAELTPFFEDLLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRAD 60

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            A + L++ G+ +DR+ +++G +   L    +P +S NRRI++ + 
Sbjct: 61  VARKTLVEGGMPDDRVMQVTGMSDRALLNPDEPDSSENRRIELFIL 106


>gi|183222805|ref|YP_001840801.1| hypothetical protein LEPBI_I3466 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167781227|gb|ABZ99525.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 461

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F+++SS+   E+ + L  I + L  +++  + I GHTD         DN  LS +R
Sbjct: 354 DSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD---LTGTYDDNMVLSKER 410

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           A S  Q L+  GV  +R+    G    +  +      S   NRR + ++ + 
Sbjct: 411 AESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRTEFVLLNP 461


>gi|189912837|ref|YP_001964392.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167777513|gb|ABZ95814.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
          Length = 423

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  F+++SS+   E+ + L  I + L  +++  + I GHTD         DN  LS +R
Sbjct: 316 DSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD---LTGTYDDNMVLSKER 372

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           A S  Q L+  GV  +R+    G    +  +      S   NRR + ++ + 
Sbjct: 373 AESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRTEFVLLNP 423


>gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9]
 gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
           SS9]
          Length = 324

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     + I  LQ I + L +  E  + + GHTD+         N  LS +RA   
Sbjct: 215 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSR---GAEAYNQNLSEERAAVV 271

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L    G+ + RI    G         +D       NRR+++ 
Sbjct: 272 AGYLATHFGIEQSRIQA-QGRGELEPVATNDTEDGRGQNRRVEVF 315


>gi|83749427|ref|ZP_00946420.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
 gi|207738949|ref|YP_002257342.1| outer membrane protein [Ralstonia solanacearum IPO1609]
 gi|83723907|gb|EAP71092.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
 gi|206592320|emb|CAQ59226.1| outer membrane protein [Ralstonia solanacearum IPO1609]
          Length = 215

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS      +K+++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGRELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 200


>gi|15596170|ref|NP_249664.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa PAO1]
 gi|107100429|ref|ZP_01364347.1| hypothetical protein PaerPA_01001454 [Pseudomonas aeruginosa PACS2]
 gi|116048898|ref|YP_792301.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218893056|ref|YP_002441925.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa LESB58]
 gi|254239321|ref|ZP_04932644.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa C3719]
 gi|254245256|ref|ZP_04938578.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa 2192]
 gi|296390668|ref|ZP_06880143.1| peptidoglycan-associated lipoprotein [Pseudomonas aeruginosa PAb1]
 gi|81622520|sp|Q9I4Z4|PAL_PSEAE RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|9946880|gb|AAG04362.1|AE004530_15 Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa PAO1]
 gi|115584119|gb|ABJ10134.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126171252|gb|EAZ56763.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa C3719]
 gi|126198634|gb|EAZ62697.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa 2192]
 gi|218773284|emb|CAW29096.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa LESB58]
          Length = 168

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 69  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R           + NRR+++
Sbjct: 126 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 166


>gi|260590691|ref|ZP_05856149.1| lipoprotein PG3 [Prevotella veroralis F0319]
 gi|260537352|gb|EEX19969.1| lipoprotein PG3 [Prevotella veroralis F0319]
          Length = 256

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 8/148 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  + +  V  V        + ++     +  +F  + S         L K+
Sbjct: 105 MDKVAREAAQQLPNASVDKVTDANGLECVKVTF---DSGILFPLNGSDLNAAAKNDLTKL 161

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             ++  ++     I+G+TDA       + N  LS  RA S    L   GV+  +I  + G
Sbjct: 162 AGLMKRNSNCDVAIQGYTDA---SGNDKINIPLSQRRASSVSSYLQNQGVTSRQIRSVEG 218

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
           F        +  ++  NRR+++ +   Q
Sbjct: 219 FGSQNPI-ENKTVSQKNRRVEVYLYASQ 245


>gi|254459056|ref|ZP_05072479.1| OmpA domain protein [Campylobacterales bacterium GD 1]
 gi|207084327|gb|EDZ61616.1| OmpA domain protein [Campylobacterales bacterium GD 1]
          Length = 254

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  S      E +  LQ     L  +      I G+TD+      A  N  LS +RA + 
Sbjct: 152 FAPSKYNVSEELVNDLQNFALFLKENPGYQILIYGYTDSI---GSAAANKTLSQNRANAV 208

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
            + L + G+   R++ I G         +      + NRRI++ +  
Sbjct: 209 KEALSRYGIKTTRMTAI-GKGEANPIADNTTKTGRAENRRIEVELLQ 254


>gi|32266001|ref|NP_860033.1| flagellar motor protein MotB [Helicobacter hepaticus ATCC 51449]
 gi|32262050|gb|AAP77099.1| flagellar motor component MotB [Helicobacter hepaticus ATCC 51449]
          Length = 251

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 8/162 (4%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                     ++ +  IS + S   A+               +   +   +   FD  S+
Sbjct: 67  DQDDVNDSETENESGAISESSSVTSAEIEQMAEEGGILEQMEMGMSLRLPSNLFFDSGSA 126

Query: 243 IPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQ 297
                +  + LQ++  ++    +   I +RG+TD    P  +  +DN+ LS  R+ S  +
Sbjct: 127 EINNSDVFLYLQRMSAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARSLSVMK 186

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            L+K+G+S +RI   SG+  H+    +D     + N R++I 
Sbjct: 187 NLIKNGISPERI-SFSGYGEHQAIAPNDSALNRAKNNRVEIF 227



 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 1/110 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I++T +   + ++  F       +T
Sbjct: 3   KKKKCPECPAG-EKWAVPYADFLSLLLALFIALWAISSTSNADSELLKTEFVKIFDFTLT 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           +      +      +      +S    +T   ++         +Q +   
Sbjct: 62  SPLNSDQDDVNDSETENESGAISESSSVTSAEIEQMAEEGGILEQMEMGM 111


>gi|292490116|ref|YP_003533011.1| putative outer membrane lipoprotein yiaD [Erwinia amylovora
           CFBP1430]
 gi|292901121|ref|YP_003540490.1| outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291200969|emb|CBJ48108.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291555558|emb|CBA24133.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
           amylovora CFBP1430]
          Length = 221

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SSS   P     L  +  
Sbjct: 81  YMDVQEAKLRDKMKGTGVSVTRSGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 137

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD+       + N  LS  RA      L+  GV+ +R+ + +G  
Sbjct: 138 VLKEYPKTAVNVVGYTDS---SGSRQLNMNLSQQRADGVGSALIAQGVAANRV-RTNGMG 193

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 194 PDNPVASNSSAEGKAQNRRVEITL 217


>gi|330873229|gb|EGH07378.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 229

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIIGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIAS-DP-MNSANRRIDILVEDRQG 343
           +   ++ D    + NRR+++ ++   G
Sbjct: 200 QPIASNADTNGRAQNRRVEVNLKPIPG 226


>gi|313683568|ref|YP_004061306.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
 gi|313156428|gb|ADR35106.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
          Length = 412

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 76/286 (26%), Gaps = 24/286 (8%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
               + ++Q   P            +       + +   ++L            LK G +
Sbjct: 144 VRKYQGLDQDLKPLKNPQWQRKGNTYTLTARDVKGACIMMEL----------EKLKPGQS 193

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
                       +  +   + ++  K       EK   +   T       + ++   PP+
Sbjct: 194 ASSIAMADPMQPVIDVKPVKPTKPRKEEPAVPKEKETPVPDVTKTVMPEPEVKSQTTPPI 253

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +  +         +          +           V                 N  +F+
Sbjct: 254 ANVEPKIEPAAPVVAAKPAVEKPVVVVAKPATEKPVVEAAAPAPYFR-------NFQIFE 306

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF---RNIARDNWRLSLDRAYS 294
                        L++  ++         +I G+TD  P    + +   N  LS  RA  
Sbjct: 307 SRVVALSEVGKERLREWAQLFKAGGYKSVTINGYTDNIPPQRLKALYATNAILSEARAQM 366

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               L+  GV    I  ++G         ++       NRRI+ ++
Sbjct: 367 VADYLVSIGVDSSAIK-VNGRGDVDPVAPNETEEGRSKNRRIEFIL 411


>gi|255319448|ref|ZP_05360662.1| outer membrane protein [Acinetobacter radioresistens SK82]
 gi|255303388|gb|EET82591.1| outer membrane protein [Acinetobacter radioresistens SK82]
          Length = 486

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        +L +   +L     V+ +++GHTDA         N  LS+ RA + 
Sbjct: 366 FASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAE---GSEAVNNNLSVQRAQAV 422

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+  GVS  ++  + G+   +    +        NRRI+  + +
Sbjct: 423 VNYLVSRGVSPSKLQAL-GYGQDQPVTDNATSQGKFQNRRIEFEILN 468


>gi|312887218|ref|ZP_07746822.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311300530|gb|EFQ77595.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 177

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 8/157 (5%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            A K KK +      +   +  +  +      V        ++       +   F+  S+
Sbjct: 22  PACKSKKEIAKPQPPLVEVVKKVPEEKKPEPQVEAPKEVAPVVEKPDYNFSNLQFEFDSA 81

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           I    +  +L K+   +     V  +  G++ A         N  LS +RA S    L+ 
Sbjct: 82  ILKTSSYPMLDKVARAMKLDASVKFVLNGYSSAE---GTPEHNLLLSEERANSVKTYLLN 138

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           +GV   +++   G+        +        NRR++I
Sbjct: 139 AGVDASQLTA-KGYGDSNPITPNTTEEGRVLNRRVEI 174


>gi|262401486|ref|ZP_06078054.1| outer membrane protein A precursor [Vibrio sp. RC586]
 gi|262352307|gb|EEZ01435.1| outer membrane protein A precursor [Vibrio sp. RC586]
          Length = 109

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           MF   S  P  E I  L +I  VL    +    + GHTD++     A  N  +S  RA +
Sbjct: 1   MFGFDSVEPSQEFIDQLTEISSVLISYPQAQAKVVGHTDST---GSALYNQNISEHRAQA 57

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               L++ GV+  ++ +  G    +    ++       NRR++I +
Sbjct: 58  VVNKLIELGVTPTQL-EWRGEGEFQPVADNNTAEGRAANRRVEITI 102


>gi|322418762|ref|YP_004197985.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320125149|gb|ADW12709.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 465

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 84/264 (31%), Gaps = 16/264 (6%)

Query: 88  NPPERSSQNKIDLSIDEHITKNS----VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
             P  + +  ++       T       + L+      +   +   ++      +   ++ 
Sbjct: 201 GEPAPAKEPPLEPVPAAEPTPGHYKYCITLQGEFDIDQAIIRTELHDQIAQVGNFMKKYP 260

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
             +   +         + +++ S  + E      + +  I   +   +     + I+   
Sbjct: 261 TTTAVIEGHTDNVGSYNHNMDLSQRRAEAVVSHLVEQYGIDRSRLSAKGYGFTRPIADNA 320

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVL 259
           +        +          +      +R        FD   +   P+    + K+ + +
Sbjct: 321 TEEGRQKNRRIEAVIDCAFDVQQVTPAERLCMALVLDFDSGKADIKPQYRDEIAKVADYM 380

Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
              T   ++  GHTD +        N +LS  RA +    L+ + G+   R+S   G+  
Sbjct: 381 KRYTTTTAVIEGHTDNT---GSPSQNMKLSQQRAQNVVDYLVNNFGIERSRLSA-KGYGA 436

Query: 318 HRLKIASDP--MNSANRRIDILVE 339
            R    +D       NRRI+ +++
Sbjct: 437 TRRVAYNDTPEGRQKNRRINAVID 460


>gi|228474126|ref|ZP_04058867.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274640|gb|EEK13481.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
           33624]
          Length = 231

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +  + G   +    GI+++  D+++   F+ + +    E   +L K+  VL    
Sbjct: 83  QAKKIEEEIPGAEVKRVDDGIVVTF-DEKSGVTFEFNKADLTSEAKTLLTKMAGVLKEYP 141

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           +  + + GHTD+   +     N  LS  RA +       SG+   R +    F   +   
Sbjct: 142 DTNVIVAGHTDS---KGKPAYNMGLSERRAKAVTNFFTASGLKASRFTT-KWFGATQPAY 197

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            +      + NRR++I +   +
Sbjct: 198 DNSTEEGRAKNRRVNIAIVPNE 219


>gi|206564258|ref|YP_002235021.1| putative outer membrane protein A precursor [Burkholderia
           cenocepacia J2315]
 gi|198040298|emb|CAR56283.1| putative outer membrane protein A precursor [Burkholderia
           cenocepacia J2315]
          Length = 220

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 7/203 (3%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     S +    +        D    ++  +              ++     + L  K 
Sbjct: 21  ASGPTFSASELQPRDGVRTFQVDCHGLLSGPQTCMKAARKICGDEPVRAVDSARALRDKS 80

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                                    ++  ++     +F    +   P     L ++    
Sbjct: 81  DPATLVFQCGAAPAEAASAAEPAAAVVERVNLSGDALFATDHATLAPTARESLDRLLSER 140

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A  T   +++ G TD+         N  LS  RA S    L   G+  D +  +SG    
Sbjct: 141 ADRTYSQVTVTGFTDSV---GSDDYNLALSKRRAESVAAYLKAHGLKTDSM-TVSGRGKA 196

Query: 319 RLKIASDPMNSA--NRRIDILVE 339
               ++        NRR++I ++
Sbjct: 197 DPVASNATPEGRASNRRVEIRLQ 219


>gi|26987958|ref|NP_743383.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
           KT2440]
 gi|148546495|ref|YP_001266597.1| peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
 gi|60392879|sp|P0A138|PAL_PSEPK RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|60392880|sp|P0A139|PAL_PSEPU RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|24982671|gb|AAN66847.1|AE016313_6 peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
           KT2440]
 gi|663068|emb|CAA52294.1| OprL protein [Pseudomonas putida]
 gi|148510553|gb|ABQ77413.1| Peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
 gi|313497575|gb|ADR58941.1| OprL [Pseudomonas putida BIRD-1]
          Length = 166

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164


>gi|332292401|ref|YP_004431010.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170487|gb|AEE19742.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 652

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +  +     FD +     P+  + L KI  +L+    + I I  HTDA         N  
Sbjct: 534 LKIKVGIIFFDLNKDYIRPDAAMELNKIVTLLSQQPSIEIRIESHTDAR---ADDNYNME 590

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVE 339
           LS  RA S    L++ G++++RI    GF   +L           +  +  NRR + ++E
Sbjct: 591 LSQRRAISTKNYLIRQGIAKERILSAQGFGETQLLNDCSNGVQCDEVQHQINRRSEFIIE 650

Query: 340 D 340
            
Sbjct: 651 K 651


>gi|325953789|ref|YP_004237449.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323436407|gb|ADX66871.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 337

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVL 259
           ++ L  +   + +        I   + D+    +   FD   +    +    + +I + L
Sbjct: 199 INILQKEGFKQTISML-KADQIQKDLNDKGKAVLHINFDTDKATLKADGKEAVAEITKAL 257

Query: 260 A-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  ISI G+TD +      + N  LS  RA +  + L+KSG+  +R+S   GF  +
Sbjct: 258 NTDKMLKISINGYTDNT---GDEKHNLDLSKQRAETVKKELIKSGIDVNRLSS-EGFGQN 313

Query: 319 RLKIASDPMNSA--NRRIDIL 337
                ++       NRR++++
Sbjct: 314 NPIADNNTEEGKSQNRRVELI 334


>gi|254506121|ref|ZP_05118265.1| outer membrane protein [Vibrio parahaemolyticus 16]
 gi|219550939|gb|EED27920.1| outer membrane protein [Vibrio parahaemolyticus 16]
          Length = 211

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 7/155 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             +  +  +      +   L  +         L   +   +     +      F+   S 
Sbjct: 59  QQIVTQGEVTPEMAWLKEELKAIGLSLNCTEYLLTNSEVRLSND-PEVIARVYFNFDQST 117

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              ++  VL ++  ++  ++  + + GHTD       A  N+ L L R+ S    L+  G
Sbjct: 118 LTQQSEYVLTRVIRMVESNSSNLELAGHTDNV---GDAGYNFSLGLKRSKSVEDYLIDQG 174

Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           V   R++  S +   +  + +  D     NRR++I
Sbjct: 175 VDPKRVTTTS-YGETKPFVDNMSDENRKLNRRVEI 208


>gi|254452952|ref|ZP_05066389.1| OmpA/MotB [Octadecabacter antarcticus 238]
 gi|198267358|gb|EDY91628.1| OmpA/MotB [Octadecabacter antarcticus 238]
          Length = 668

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 17/265 (6%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
           ++S    D      +   + +            QR    +     + + E  +     + 
Sbjct: 406 QTSVAAADSDRQAALLALANNALTQEQALSADNQRQVALLNEQVAALRGEMGRLQALLNL 465

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           E   D+  +  +E             L  E+   +     L+ +A + +  L    +D +
Sbjct: 466 ENEADVTANVQIETLTQNLNTAMARALLAERRARVLEDAELERMAAE-AVELERYRSDFL 524

Query: 212 VKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS------- 262
                      G+ I        +  +F++ ++    +    + K+  +L          
Sbjct: 525 GLLRNVLEDVDGVRIEGDRFVFSSEVLFEQGAARLSADGQREIAKVAAILRDVAGDIPES 584

Query: 263 -TEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
              VI + GHTD  P        +NW LS  RA S    ++    +  DR+   +GF  +
Sbjct: 585 IDWVIRVDGHTDNVPLSGAGEFANNWELSQARALSVVLYMVNFLAIPPDRL-AANGFGQY 643

Query: 319 RLKIASDP--MNSANRRIDILVEDR 341
           +     D     + NRRI++ + +R
Sbjct: 644 QPINLEDTTEARAQNRRIELKLTER 668


>gi|110640101|ref|YP_680311.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282782|gb|ABG60968.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 670

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F +S+   +  +   L ++ EVL  +    I + GHTD       A  N  LS  R
Sbjct: 565 KNVFFHQSTPNLIETSYPELDRMVEVLKTNPTVRIELDGHTDNQ---GDAALNLALSEKR 621

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             +    L+  G+   RI+    F   +    ++   +   NRR++I++ 
Sbjct: 622 VETVKAYLVSKGIDNKRITT-RAFGGTKPIAPNNTEENRKKNRRVEIIIL 670


>gi|153952340|ref|YP_001398779.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939786|gb|ABS44527.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 319

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +         +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FDFDKTTINLTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + +++       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNNTKEGRADNRRVD 313


>gi|329943316|ref|ZP_08292090.1| ompA family protein [Chlamydophila psittaci Cal10]
 gi|332287892|ref|YP_004422793.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
           6BC]
 gi|313848464|emb|CBY17468.1| putative peptidoglycan-associated protein (periplasmic)
           [Chlamydophila psittaci RD1]
 gi|325507092|gb|ADZ18730.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
           6BC]
 gi|328814863|gb|EGF84853.1| ompA family protein [Chlamydophila psittaci Cal10]
 gi|328915156|gb|AEB55989.1| outer membrane protein, OmpA family [Chlamydophila psittaci 6BC]
          Length = 191

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E  + +      ++       + I GHTD       A  N  L   RA +
Sbjct: 87  FATDSYTIKGEENLAILSSLVRQMQKSPKMTLYIEGHTDER---GAASYNLALGARRANA 143

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
             Q L+K G+S DR+  +S +   +      ++     NRR +  +  R
Sbjct: 144 VKQHLIKQGISADRLFTVS-YGKEQPINLGHNELAWQQNRRTEFKIHAR 191


>gi|192358872|ref|YP_001981881.1| putative agglutination protein [Cellvibrio japonicus Ueda107]
 gi|190685037|gb|ACE82715.1| probable agglutination protein [Cellvibrio japonicus Ueda107]
          Length = 599

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 8/121 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIA 281
           ++  + +     +FD  SS+  P     L  +   + ++ +V  I + GHTD +      
Sbjct: 481 LITDVNNLSGDALFDVGSSVLKPGATQKLDALIAQIKNTPKVVGIRVEGHTDNT---GTD 537

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             N  LS  RA       + +G+ E+    + GF   R    ++     +ANRR++I + 
Sbjct: 538 ALNIPLSKARAQRVRDYAVLNGL-ENIPVSVDGFGASRPVADNNTEAGRAANRRVEISIT 596

Query: 340 D 340
            
Sbjct: 597 R 597


>gi|225012476|ref|ZP_03702912.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225003453|gb|EEG41427.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 322

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           I   +N  +F  SSS+        L+K+  +L       I I GHT        A  N +
Sbjct: 211 IKSNQNKILFKASSSVLDKGGRATLEKVKMLLNTYQNTAIIIEGHTSTD---GSASYNQK 267

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           LS  RA +    L+   +   RIS I G+  ++    +      + +RR  I +
Sbjct: 268 LSEQRASAIKDYLISQTIDASRISTI-GYGENQPIGDNKTVKGRAESRRAKIKI 320


>gi|110636642|ref|YP_676849.1| outer membrane porin F [Cytophaga hutchinsonii ATCC 33406]
 gi|110279323|gb|ABG57509.1| outer membrane protein, porin F precursor [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 669

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD +      E+   L ++  +L ++  +   I G+TD+         N +LS  R
Sbjct: 561 NNVFFDFNKYELKSESYPELDRLVTLLKNNNAMKIEISGYTDSI---GTKSYNDKLSGRR 617

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A +    L+ KS + + RI  +  F       ++        NRR++  + ++
Sbjct: 618 AQAVATYLITKSAIDKSRI-TVKAFGEENPVTSNKTAKGRELNRRVEFKITNK 669


>gi|308126352|ref|ZP_07663724.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
 gi|308109323|gb|EFO46863.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
          Length = 182

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 53/155 (34%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             + ++ K+  A      + G+WK+ +ADFM  LMA FLV+W++   D + +KAI  + +
Sbjct: 3   KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                  +        Q+           +    +          G  +  +    +   
Sbjct: 63  SSSVFDKSYGNPFDTSQSISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEINSLVPGT 122

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
                           +TR  ++ +   +  D  +
Sbjct: 123 FDTQEQLAALAKVIEEMTRADQRARKRQRYCDTAR 157


>gi|270264140|ref|ZP_06192407.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
 gi|270041789|gb|EFA14886.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
          Length = 219

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SS+   P     L  +  
Sbjct: 79  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSATLKPAGANTLTGVAM 135

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD+         N  LS  RA      L+  GV+ +RI + SG  
Sbjct: 136 VLKEYPKTAVNVIGYTDS---SGSRALNMTLSQQRADGVGSALITQGVAANRI-RTSGAG 191

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 192 PDNPIASNSTAEGKAQNRRVEITL 215


>gi|284035576|ref|YP_003385506.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283814869|gb|ADB36707.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 306

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 7/184 (3%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +   + + +   +   P  +    +  K   +   +    +++   +    +   V++  
Sbjct: 126 TATPKPTSSATASAAKPTPASPPPVVAKPVSQPPAVKTVAANSERVVPPKTLDAKVVYTP 185

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
                 +    Q     F +S +  LP+    L+++ + +       I + GHTD     
Sbjct: 186 PLVVAPVGKTTQLQALQFVQSKTELLPDAQPALEQLLQFMQSQPTAEIELSGHTDNQ--- 242

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
                N  LS  R       L+K+G+   RI+   G+   R   +++       NRR+++
Sbjct: 243 GDFDQNLLLSKQRVEVIKAYLVKNGIPASRITT-RGYGPTRPIASNNSETTRQQNRRVEM 301

Query: 337 LVED 340
           +V  
Sbjct: 302 IVLK 305


>gi|157736296|ref|YP_001488979.1| hypothetical protein Abu_0025 [Arcobacter butzleri RM4018]
 gi|157698150|gb|ABV66310.1| hypothetical protein, OmpA domain [Arcobacter butzleri RM4018]
          Length = 316

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
               +LI+ I +     F++ SSIP  ++   +++I ++L  +      + GHTD+    
Sbjct: 197 PEIQLLINNILKDRKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSR--- 253

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
             A  N ++S DRA S   +L+ SGV+E RI  I G+         D    +  NRR++ 
Sbjct: 254 GEAALNKQISQDRANSVKNILVNSGVNETRIKAI-GYGEEFPIAKDDENGLSEINRRVEF 312

Query: 337 LV 338
           ++
Sbjct: 313 II 314


>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
          Length = 356

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSDQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +   N         RR++I 
Sbjct: 285 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEID 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4]
 gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4]
          Length = 394

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
                V+ +     + + I D+    +   FD   S    +    + K+ E +       
Sbjct: 245 GTPMNVVVDARGCPVPVDITDELKMELRVFFDNDKSAIKTQYKPEIAKVAEKMREYPNST 304

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             + GH   +     AR N RLS  RA +   +L    G++ +R+S + G+ + +    +
Sbjct: 305 ARVEGHASKTGP--SARYNQRLSEARAVAVKSMLTNEFGIAPNRLSTV-GYGYDQPIADN 361

Query: 325 DPMNSA--NRRIDILVEDRQ 342
           +       NRR+  ++   +
Sbjct: 362 NTEEGRAMNRRVYAIITGDK 381


>gi|78777214|ref|YP_393529.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
 gi|78497754|gb|ABB44294.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
          Length = 240

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 11/203 (5%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           +  K S    S  G        ++  ++K       P+      + +  +    L +   
Sbjct: 18  DAKKVSEAIGSLSGAMSVLEGGIKTEVSKRRIQESTPIESTDETSEQVNRISAALKEMNE 77

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              +          V  E  + G +I +     + +F   S++   E  ++  K   ++ 
Sbjct: 78  IQEAQASTQGSAAVVSLEEAQDGFVIEL---PASLLFKPGSAVIQNEDSLLFLKRVALII 134

Query: 261 ---HSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
               +   +S+ GHTD      +   +DNW LS  RA S  Q L+  GV   RIS   G+
Sbjct: 135 GELPNETTLSVCGHTDDQGPSVKGPYKDNWELSSARAISVLQELLLDGVDPKRISAA-GY 193

Query: 316 AHHRLKIASDPMNSA--NRRIDI 336
           A    K  +   +    NRR+++
Sbjct: 194 AEFSPKATNATESGREQNRRVEL 216


>gi|33603081|ref|NP_890641.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
 gi|33568712|emb|CAE34470.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
          Length = 215

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I    +   FD   S   P  + VL  +   L    E    + GHTD+
Sbjct: 92  VVEMPDGSLKVNI---PSNVSFDTDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDS 148

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +     A  N +LS++RA +    L K GV++ R+  + G   +     +        NR
Sbjct: 149 T---GSAAHNQQLSVNRARAVTSYLGKQGVAQGRM-TVEGRGANDPVGDNATAEGRAANR 204

Query: 333 RIDILV 338
           R+++ +
Sbjct: 205 RVEVYL 210


>gi|160896293|ref|YP_001561875.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|160361877|gb|ABX33490.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 244

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD + S        +L +  E L ++    + I GHTD++        N  LS
Sbjct: 103 DIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 159

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LDRA S    L   GVS  RI    G   H+   ++D     + NRR++I V
Sbjct: 160 LDRANSTRNYLTMRGVSGARI-ATEGRGSHQPVASNDSASGRAMNRRVEIFV 210


>gi|119773836|ref|YP_926576.1| Outer membrane protein-related peptidoglycan-associated
           (lipo)protein [Shewanella amazonensis SB2B]
 gi|119766336|gb|ABL98906.1| Outer membrane protein-related peptidoglycan-associated
           (lipo)protein [Shewanella amazonensis SB2B]
          Length = 481

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD  S   LPE+  VL+ +   L         + GHTD    +     N  LSL R
Sbjct: 371 DGLLFDFDSDRMLPESQPVLEVLATYLKQHPAKGFYVVGHTDD---KGERAYNQSLSLRR 427

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           A +  Q L +   +   +++   G   +    +  ++   + NRR+++++   
Sbjct: 428 ADAVIQSLTQQYHIPASQLTA-HGNGEYSPVASNENESGQALNRRVELVLRSD 479


>gi|331007308|ref|ZP_08330507.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
 gi|330418870|gb|EGG93337.1| Flagellar motor rotation protein MotB [gamma proteobacterium
           IMCC1989]
          Length = 434

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 99/287 (34%), Gaps = 27/287 (9%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           KK +                 I + +N   ++ ++K          +N ++ K+     +
Sbjct: 148 KKQLANTEQEKLAAQAGLKAEIDEIKNQLVQTEKDKNQSQEALSTIRNELEEKLVIKETE 207

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            + Q  + N F    +Q+ E  K  L  +  +  +   + +  +   + E   L  L+K+
Sbjct: 208 YEKQIAQLNEFSSLINQKYEATKAQLDEELVRIAEFSATIETLEERLQREKTALSELTKQ 267

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             L  K    L     ++                         LI + D     +F   S
Sbjct: 268 LALLDKTNAELSSEKSRLVQQFKDGTT----------------LIRLEDT---ILFSSGS 308

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAY 296
           +         L  + + LA      ISI GHTD  P  +        NW LS  RA  A 
Sbjct: 309 ASLNARGQKTLSLVADTLAEFPNHLISIEGHTDHRPIVSTLAEKYPTNWELSAARASFAI 368

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           + LM+ G+   +   + GFA+ R         S   NRRI+IL+   
Sbjct: 369 RHLMEKGLPAKQFQAV-GFANTRPIAMDVDYASQKKNRRIEILLHPP 414


>gi|119357899|ref|YP_912543.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119355248|gb|ABL66119.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 417

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 81/291 (27%), Gaps = 25/291 (8%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           KK         G   +  S+  F +   P R S     LS+ +              N  
Sbjct: 141 KKVDADNLGSLGLMSLLNSQKSFVQSAAPSRLSGVLGLLSLSQLGGMPPSSPTGIPGNIP 200

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              + L      L+      +  +S +           +TD   +            S  
Sbjct: 201 SFLKGLWPFFLILAALFLLINTCSSPSGQETPPATEAVATDTVTAPETAPAPLPADTSAV 260

Query: 182 KILAMKRKKR--------LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
              A+   +         L      I   L   + D               L+       
Sbjct: 261 TSDALGAFEEYALPNGVKLNIPELGIERKLIAFIQDATKPADKETWFSFDRLV------- 313

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD   S  +  +   L  IGE+L       + I G+TD        + N +LS  RA
Sbjct: 314 ---FDTGKSTLMATSQEQLNNIGEILKAYPAVELKIGGYTDNV---GDPQANKKLSQARA 367

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            +    L+K G+   R+    G+        +        NRR+D  V  +
Sbjct: 368 ETVMAELVKLGIDNIRL-AAEGYGIEHPVADNATEEGRQQNRRVDCRVTKK 417


>gi|315635427|ref|ZP_07890693.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315480185|gb|EFU70852.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 316

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
               +LI+ I +     F++ SSIP  ++   +++I ++L  +      + GHTD+    
Sbjct: 197 PEIQLLINNILKDKKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSR--- 253

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
             A  N ++S DRA S   +L+ SGV+E RI  I G+         D    +  NRR++ 
Sbjct: 254 GEAALNKQISQDRANSVKNILVNSGVNETRIKAI-GYGEEFPIAKDDENGLSEINRRVEF 312

Query: 337 LV 338
           ++
Sbjct: 313 II 314


>gi|319778078|ref|YP_004134508.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171797|gb|ADV15334.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 369

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
             +++ +     F  +S+    ++  +L ++  V+       + + GHTD+        +
Sbjct: 252 RFAVLSRTGAIYFRTASARLDSQSRPLLAEVVGVVGKCPGLKVEVSGHTDSD---GSPIE 308

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           N RLS  RA +    ++ +G+   +I   +G+   R    +D     + NRRI+ 
Sbjct: 309 NKRLSERRAQAVADAIVAAGIPRTQI-AATGYGEERPVADNDTPKNKALNRRIEF 362


>gi|161521586|ref|YP_001585013.1| hypothetical protein Bmul_5051 [Burkholderia multivorans ATCC
           17616]
 gi|189352247|ref|YP_001947874.1| hypothetical protein BMULJ_03465 [Burkholderia multivorans ATCC
           17616]
 gi|160345636|gb|ABX18721.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|189336269|dbj|BAG45338.1| putative flagellar motor protein [Burkholderia multivorans ATCC
           17616]
          Length = 214

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L  +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLRSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P+   +L+     +   L    +++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|53716748|ref|YP_105773.1| hypothetical protein BMAA1115 [Burkholderia mallei ATCC 23344]
 gi|53722286|ref|YP_111271.1| hypothetical protein BPSS1264 [Burkholderia pseudomallei K96243]
 gi|67640638|ref|ZP_00439437.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|76817712|ref|YP_335426.1| hypothetical protein BURPS1710b_A0267 [Burkholderia pseudomallei
           1710b]
 gi|121597371|ref|YP_989733.1| hypothetical protein BMASAVP1_0116 [Burkholderia mallei SAVP1]
 gi|124383227|ref|YP_001024134.1| hypothetical protein BMA10229_0310 [Burkholderia mallei NCTC 10229]
 gi|126444000|ref|YP_001062783.1| hypothetical protein BURPS668_A1788 [Burkholderia pseudomallei 668]
 gi|126447861|ref|YP_001078471.1| hypothetical protein BMA10247_A1285 [Burkholderia mallei NCTC
           10247]
 gi|126458362|ref|YP_001075736.1| hypothetical protein BURPS1106A_A1702 [Burkholderia pseudomallei
           1106a]
 gi|134283770|ref|ZP_01770468.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|167004053|ref|ZP_02269827.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|167723789|ref|ZP_02407025.1| hypothetical protein BpseD_32535 [Burkholderia pseudomallei DM98]
 gi|167742753|ref|ZP_02415527.1| hypothetical protein Bpse14_32062 [Burkholderia pseudomallei 14]
 gi|167819935|ref|ZP_02451615.1| hypothetical protein Bpse9_32712 [Burkholderia pseudomallei 91]
 gi|167828320|ref|ZP_02459791.1| hypothetical protein Bpseu9_31854 [Burkholderia pseudomallei 9]
 gi|167849768|ref|ZP_02475276.1| hypothetical protein BpseB_31255 [Burkholderia pseudomallei B7210]
 gi|167898369|ref|ZP_02485770.1| hypothetical protein Bpse7_31831 [Burkholderia pseudomallei 7894]
 gi|167906730|ref|ZP_02493935.1| hypothetical protein BpseN_31160 [Burkholderia pseudomallei NCTC
           13177]
 gi|167915084|ref|ZP_02502175.1| hypothetical protein Bpse112_31676 [Burkholderia pseudomallei 112]
 gi|167922922|ref|ZP_02510013.1| hypothetical protein BpseBC_30487 [Burkholderia pseudomallei
           BCC215]
 gi|217418998|ref|ZP_03450505.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|226198078|ref|ZP_03793650.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237510063|ref|ZP_04522778.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
 gi|242311463|ref|ZP_04810480.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|254174540|ref|ZP_04881202.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|254183624|ref|ZP_04890216.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|254191105|ref|ZP_04897610.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254193505|ref|ZP_04899939.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|254200586|ref|ZP_04906951.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254262357|ref|ZP_04953222.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254301765|ref|ZP_04969208.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|254356764|ref|ZP_04973039.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|52212700|emb|CAH38731.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
 gi|52422718|gb|AAU46288.1| ompA family protein [Burkholderia mallei ATCC 23344]
 gi|76582185|gb|ABA51659.1| ompA family protein [Burkholderia pseudomallei 1710b]
 gi|121225169|gb|ABM48700.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124291247|gb|ABN00517.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126223491|gb|ABN86996.1| OmpA family protein [Burkholderia pseudomallei 668]
 gi|126232130|gb|ABN95543.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|126240715|gb|ABO03827.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|134244952|gb|EBA45048.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|147748198|gb|EDK55273.1| OmpA family protein [Burkholderia mallei FMH]
 gi|148025791|gb|EDK83914.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|157811639|gb|EDO88809.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|157938778|gb|EDO94448.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160695586|gb|EDP85556.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|169650258|gb|EDS82951.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|184214157|gb|EDU11200.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|217398302|gb|EEC38317.1| OmpA family protein [Burkholderia pseudomallei 576]
 gi|225929954|gb|EEH25969.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|235002268|gb|EEP51692.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
 gi|238521399|gb|EEP84851.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|242134702|gb|EES21105.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|243060517|gb|EES42703.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254213359|gb|EET02744.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 215

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +++++      K +   L+  +A            R  ++   I    + +
Sbjct: 43  ELSSKLDAEVRQRQLESQRRKTLEQALAAPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P    +L+     +   L  + E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDELQPAGRDLLKSLAGPLAAYLNANHEILMVSGFADDLQVRAGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +     ++D   + NRR++I
Sbjct: 153 KRALTVTRAFIDEGVPASSVFAAA-FGSEQPVSPNSNDAGRAKNRRVEI 200


>gi|95930003|ref|ZP_01312743.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95133972|gb|EAT15631.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 176

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
            T  F+        E    L +    L  +     +  GH D          N  L   R
Sbjct: 70  GTVYFEFDQYTLSAEARDTLAENMRYLQANPGTTLVIEGHCDER---GSDEYNLALGERR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
           A +A Q L   GV+ DR+S IS +   +     +++   + NRR + +
Sbjct: 127 AVAAQQYLTSMGVATDRLSTIS-YGEEKPVDMASTEEAWAKNRRAEFV 173


>gi|330995812|ref|ZP_08319709.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329574542|gb|EGG56107.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 242

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARD-----N 284
            +  +F+ SSS         L K    + +  + + +   G+TD   ++N         N
Sbjct: 111 DSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKN 170

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             LSL RA S    L + GVS  +I+ + G         +        NRR+++ +   +
Sbjct: 171 MDLSLQRANSVSNYLKQCGVSSTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASE 230


>gi|255036344|ref|YP_003086965.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254949100|gb|ACT93800.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 502

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +I    +   L K+ E+L   T    +  GHTDA         N  LS  R  +A
Sbjct: 385 FDTDKAIIRNASKETLSKVVELLNMRTNCRIVLVGHTDAR---ASDAYNVSLSRRRVDAA 441

Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            + L+++G+    RI     +  +R    +  +     NRR++I +    
Sbjct: 442 KRFLVRAGLTDPSRIIA-EYYGEYRPIAENTTVEGLQSNRRVEIKILPNN 490


>gi|126732831|ref|ZP_01748624.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
 gi|126706670|gb|EBA05743.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
          Length = 605

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 19/194 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            + G+       +  ++         P+ +          RL D+   +           
Sbjct: 423 QQAGRTQNGIAMMHFNLPDVTIERSAPVERTPPPPPVVVDRLDDIRTALE---------- 472

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
             + V  +     ILI +        F    +    +   +   IG VL      I I G
Sbjct: 473 -GQEVEVDVKNEWILIRLGSALR---FASGRAELENDLSALATAIGVVLNEQPGPIRIVG 528

Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
           H+D+ P   R   + N  LS  RA +    L+ + + +     + G         +    
Sbjct: 529 HSDSVPLSGRGRFKTNEELSQARAQTVTD-LVTANLDDKERVSVEGKGPVDPIADNATAE 587

Query: 328 -NSANRRIDILVED 340
             + NRR++I++  
Sbjct: 588 GRARNRRVEIMIRR 601


>gi|188995861|ref|YP_001930113.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
 gi|188595541|dbj|BAG34516.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
          Length = 223

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+      L A      +        IL++     +  +F  +SS   P +   L K  
Sbjct: 70  KKMDKQKKELEAAVPDATIQTVNDGEAILVTF---DSGILFATNSSTLSPNSRTALTKFA 126

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +  + +  I I GHTD +      + N  LS  RA S Y  L   GVS  R+    G 
Sbjct: 127 ANMNKNPDTDIRIVGHTDNT---GSDKINDPLSERRAASVYSFLNSQGVSMSRM-AAEGR 182

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
             H     +  +     NRR+++ + 
Sbjct: 183 GSHEPVADNSTVAGRSANRRVEVYIL 208


>gi|229591493|ref|YP_002873612.1| hypothetical protein PFLU4061 [Pseudomonas fluorescens SBW25]
 gi|229363359|emb|CAY50495.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
          Length = 257

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 78/235 (33%), Gaps = 13/235 (5%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
             +     Q +            +     E    S   D      L   TD +       
Sbjct: 23  PPENPQLLQARSQFSSLQQKPESNTLAAVETRIASNAVDRANQLSLHNRTDPQIDQLAYL 82

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISII 229
                 L+++ I++ K   +L ++A   +     +    +   + +    T  G +++  
Sbjct: 83  ATQKIALAEQTIVSRKTDAQLDNIAVDRTQVQLDVRTAQLKALQAMKARPTERGQVVTFG 142

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           D     +FD   +   P +    Q +   L  + E    + G TD++        N  LS
Sbjct: 143 D----VLFDTGRAELKPGSQRDFQGLATFLLQNPERQVRVEGFTDST---GGDAFNQSLS 195

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             RA +  + L + GV   R+  + G+        +        NRR++++V + 
Sbjct: 196 ERRAQAVARGLQQLGVGPQRM-AVMGYGKQFPVADNVSAQSRQLNRRVEVIVSND 249


>gi|329297799|ref|ZP_08255135.1| putative outer membrane lipoprotein [Plautia stali symbiont]
          Length = 177

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SS+   P     L  +  
Sbjct: 37  YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSSSANLKPAGANTLTGVAM 93

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G TD++        N RLS  RA S    L+  GV+++R+ +  G  
Sbjct: 94  VLKEYPKAAVNVVGFTDST---GTRALNMRLSQQRAESVASALIVQGVAQNRL-RTQGMG 149

Query: 317 HHRLKIASDPMN--SANRRIDI 336
                 ++      + NRR++I
Sbjct: 150 PDNPVASNSTEAGKAQNRRVEI 171


>gi|84684107|ref|ZP_01012009.1| OmpA/MotB domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667860|gb|EAQ14328.1| OmpA/MotB domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 481

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 22/274 (8%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQ 125
           +     G+ L        +   P    +    D++ D   T      L    ++      
Sbjct: 216 ELIYDAGEGLSAFGTVPENFDAPAMAEALGFTDIAGDTTTTFGMDAALPERLSDLPGLLP 275

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
            LE         Q       S   D        ++T  + +  +      P     +   
Sbjct: 276 DLERLSLRDEGGQIIATGVASPGLDPGYVTSELRATLGDDARIEITAGDAPDDWVTRTNR 335

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                ++      +      +                 I            F   S+   
Sbjct: 336 ATGADQVASAGYWLPVYDFEISKQACNDAAAQVQAGRQIQ-----------FVTGSAELD 384

Query: 246 PETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
             ++ ++  +  +L H T+     ++I GHTD+        +N+RLS+ RA +    L+ 
Sbjct: 385 TASMSIINDMAGLLLHCTDKIGMRVTIGGHTDSQ---GDDNENYRLSVARANAVRDALVA 441

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
            GV   R+  + GF        +D       NRR
Sbjct: 442 RGVPAGRMQAL-GFGETEPIADNDTEEGRAANRR 474


>gi|120600257|ref|YP_964831.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|146291813|ref|YP_001182237.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120560350|gb|ABM26277.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
 gi|145563503|gb|ABP74438.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
 gi|319425048|gb|ADV53122.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 228

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    +        VL  +  
Sbjct: 88  YMDVQETKLRQQLASTGVSVTRNGDNIILNM---PNEVTFGVDQTELSDGASRVLNSVAL 144

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  G++  R+    G  
Sbjct: 145 VAKEYSKTQLNVLGYTDS---SGSDAYNLRLSQVRASEVANYLMSKGIAASRVKS-KGMG 200

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                 ++      + NRR++I++ 
Sbjct: 201 KASPIASNASAEGRAQNRRVEIVLT 225


>gi|258622653|ref|ZP_05717674.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|262171774|ref|ZP_06039452.1| outer membrane protein [Vibrio mimicus MB-451]
 gi|258585109|gb|EEW09837.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|261892850|gb|EEY38836.1| outer membrane protein [Vibrio mimicus MB-451]
          Length = 223

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  SS          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  ++        NRR++I + 
Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220


>gi|167589926|ref|ZP_02382314.1| hypothetical protein BuboB_31618 [Burkholderia ubonensis Bu]
          Length = 215

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A+K++++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAIKQRQQEAQQRKTLERALAGPLAAG----------RVTLVNGRIGIAGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +L+     +   L    E++ I G  D            DNW LS 
Sbjct: 92  FALNSDQLQPEGKELLKTLAGPLSAYLKTRDEILMISGFADDQQVHAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  + +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRAFIDAGVPAASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 199


>gi|213025961|ref|ZP_03340408.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 65

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          K++          GSWKI YADFMT +MAFFLVMW+I+ +       I +YF       +
Sbjct: 1  KRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAV 60

Query: 78 TASKG 82
          T   G
Sbjct: 61 TGEIG 65


>gi|84685242|ref|ZP_01013141.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666974|gb|EAQ13445.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 797

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 11/301 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNP--FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           + +    + +      +             + A+K   +      R   +       +  
Sbjct: 307 VTLVAPASVEQQNFDRVVGELEADLPDVFSLHATKTQAESTEGEGRPEFSATLSPEGQVQ 366

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +  +  +   T  +   +           ++  E+     +       +     D   +
Sbjct: 367 LRGRLGDEQQRTITESVARARFGMDKVYMAARLDENLPRGWSVRVLAAVEALSYLDNGVA 426

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I + E   L   + +     +  + L +   +       +  D  +  +    +    + 
Sbjct: 427 IVQPELVELRGKTGDPNANTEISRLLSEKLGEAQDYRVNVSYDEALDPIASLPSPEECVA 486

Query: 227 SIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            I +    +   F   S          + KI +VL    E  + I GHTD+         
Sbjct: 487 MINETIAGSKITFAPGSVEIEASAAATIDKIADVLRDCAEVPMEIGGHTDSQ---GSEEL 543

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N  LS  RA S    L+   +    I    G+        +D       NRRI+  +  +
Sbjct: 544 NKALSQQRANSVLNALLARRILTSNIVA-HGYGEEVPIADNDTEAGREANRRIEFRLISQ 602

Query: 342 Q 342
           +
Sbjct: 603 R 603


>gi|93005202|ref|YP_579639.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92392880|gb|ABE74155.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 392

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
                V+ +     + + I D+    +   FD   S    +    + K+ E +       
Sbjct: 243 GTPMNVVVDERGCPVPVDITDELKMELRVFFDNDKSAIKTQYKPEIAKVAEKMREYPNST 302

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             + GH   +     AR N RLS  RA +   +L    G++ +R+S + G+ + +    +
Sbjct: 303 ARVEGHASKTGP--SARYNQRLSEARAVAVKSMLTNEFGIAPNRLSTV-GYGYDQPIADN 359

Query: 325 DPMNSA--NRRIDILVEDRQ 342
           +       NRR+  ++   +
Sbjct: 360 NTEEGRAMNRRVYAIITGDK 379


>gi|313105860|ref|ZP_07792123.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa 39016]
 gi|310878625|gb|EFQ37219.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa 39016]
          Length = 169

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 70  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 126

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R           + NRR+++
Sbjct: 127 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 167


>gi|115360144|ref|YP_777282.1| hypothetical protein Bamb_5401 [Burkholderia ambifaria AMMD]
 gi|115285432|gb|ABI90948.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 214

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P+   +L+ +   LA       E++ I G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPDGRDLLKTLAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|207722387|ref|YP_002252823.1| outer membrane protein [Ralstonia solanacearum MolK2]
 gi|206587566|emb|CAQ18148.1| outer membrane protein [Ralstonia solanacearum MolK2]
          Length = 215

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS      +K+++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 200


>gi|323497435|ref|ZP_08102453.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
 gi|323317518|gb|EGA70511.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
          Length = 222

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+ +     C+ +  +++  G+    ST     I       +   + +     +++  +
Sbjct: 7   ALAVAIALSGCQATQRQNATTGESETNSTTTGAIIGALAGAAVGVATGDDAKDRRKRALI 66

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSIPL 245
                 +     G   D   + +  E   +G+ +  + +    +       F  +S    
Sbjct: 67  GATGGAVVGGGVGYYFDKQEEALRQELLNSGVQVERVGENQLLLRLENGIGFATASHTLD 126

Query: 246 PETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                 L  +  +L    +   +  G TD++        N  LS  RA S    L+  GV
Sbjct: 127 SGIRNTLNGVARILVEYPDTSLVIDGFTDST---GSDTTNQLLSERRAESVRSYLVSQGV 183

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  R     G         +        NRR++I + 
Sbjct: 184 AAGRAIA-RGNGERHPLCTNSTAEGRACNRRVEIQIL 219


>gi|255624443|ref|XP_002540477.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
           communis]
 gi|223495460|gb|EEF21906.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
           communis]
          Length = 225

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 11/196 (5%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +  R  ++ +   ++ +  ++    E         +      R +               
Sbjct: 27  NAARQRDEIRLQARTAEANQARMSAEQAKAQADQAKADADAARAQADAAANSAREEQAKN 86

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
                 +  +  + T  G++I++ D     +F+   +    E +   QK+ +VL      
Sbjct: 87  AALQQQLADLQAKQTDRGLIITLND----VLFNVDRAELSAEGMRTAQKLADVLLQEPQS 142

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           V+ + G TD++     +  N  LS  RA +    L+  GV  ++I    G+       ++
Sbjct: 143 VVLVEGFTDST---GTSSHNLDLSQRRAEAVRNALIGLGVPGNKI-ATRGYGEAYPVASN 198

Query: 325 DPM--NSANRRIDILV 338
                   NRR++I++
Sbjct: 199 ADAGSRQLNRRVEIVL 214


>gi|170703354|ref|ZP_02894140.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170131738|gb|EDT00280.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 243

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 64/222 (28%), Gaps = 7/222 (3%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
             Q           +  Q     + +        +    +     +             +
Sbjct: 24  TTQSAPTYTVRAIKAPDQPGPVFRVTCEGLVSSTRSCDAAAQKVCAGKPVTLLQAVDRVR 83

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                   ++          +++   VA      V  +     +    +  + +  F   
Sbjct: 84  RGAAMGDPRELTFMCGVPPQASVEPPVAAQPQPVVQTQPVAAPVAQRQVLLQGSANFTFD 143

Query: 241 SSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S+   P     L +  +         +++ G+TD+         N RLS  RA +    L
Sbjct: 144 SAALTPSARQELNRFLDANRDARFSRVTVTGYTDSQ---GAHAHNVRLSEARARAVATYL 200

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
              G+  +R + + G       +++      + NRR++I +E
Sbjct: 201 RTGGLRAERFTTV-GKGAAEPVVSNATAEGRAQNRRVEIELE 241


>gi|304312291|ref|YP_003811889.1| hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
 gi|301798024|emb|CBL46246.1| Hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
          Length = 224

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285
           S+    ++ +F+ S S    + +  ++K+ +VL       ISI GHTD       A  N 
Sbjct: 97  SVTITGDSILFESSQSNVSRKGMPFIRKVADVLNAYPRSSISIEGHTDNM---GEANYNQ 153

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           +LS  RA S    L K+GV   R+S  +GF   +  + +        NRR++I+V  
Sbjct: 154 KLSEARANSVMNALNKAGVESSRMSA-TGFGMSKPLVENTSSSNRRTNRRVEIVVTG 209


>gi|188575822|ref|YP_001912751.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520274|gb|ACD58219.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 438

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 12/158 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244
           L+ +A  I + +       +   +  E     + +             +  MF   S+  
Sbjct: 278 LERVALPIPAAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAEL 337

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA S   VL  +G
Sbjct: 338 DADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVL-AAG 396

Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           + + R  + SG    +        P   + NRR++IL+
Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|154490195|ref|ZP_02030456.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
           43184]
 gi|154089087|gb|EDN88131.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
           43184]
          Length = 214

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K++    K++ +TL           V        + ++     +  +F  +SS     + 
Sbjct: 59  KKMDKQKKELEATLPEETT------VETINNGEALKVTF---DSGILFATNSSTVSAASK 109

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307
             L+ +   L  + +  I I GHTD +        N  LS  RA S +  LM+  GVS  
Sbjct: 110 SALRDLAASLNANPDTDIKIIGHTDNT---GKVDYNQTLSEKRAKSVFDYLMEDQGVSSK 166

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           R+    G   H     +      + NRR++IL+ 
Sbjct: 167 RM-TYEGKGVHEPVADNSTPEGRALNRRVEILIL 199


>gi|117621166|ref|YP_856420.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562573|gb|ABK39521.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 162

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  N  +F  ++    P+T VV++K+G+ L         I GHTD+      A  N +LS
Sbjct: 52  DFSNRVLFANNADALTPKTRVVVEKLGKTLQEVGLNRARIDGHTDS---NGAADYNDQLS 108

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             RA S   VL+  G+ +  +  I G         +      + NRR+ I++ +
Sbjct: 109 YKRAQSVADVLVSVGMPQANLD-IRGRGERDPIADNKTAAGRAENRRVAIVISN 161


>gi|322418107|ref|YP_004197330.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
 gi|320124494|gb|ADW12054.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
          Length = 196

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 13/175 (7%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             ++      P ++    A + K   +    + +     +VA ++ +      T      
Sbjct: 30  TEEQAPAVTAPSTETAKPAREAKPEQKAPVTEQTPVREPVVAQDLRETTKAPATD----- 84

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
            +  Q     F+  SS    E+   L +  E L+      + I G+ D          N 
Sbjct: 85  -LQSQLQKVYFNFDSSDLSEESRNTLSRNAEYLSKQGSLKVLIEGNCDER---GSDDYNM 140

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
            L   RA +A   L+  G++ +RIS IS +   +       +   + NRR + +V
Sbjct: 141 ALGERRAKAAKDYLVNLGIASERISTIS-YGEEKPADPGHDEAAWAKNRRAEFVV 194


>gi|172065209|ref|YP_001815921.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171997451|gb|ACB68368.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 220

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++        L K+           + + G+TDA+        N  LS  R
Sbjct: 114 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L   G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 171 ADAVAAYLRGHGLKADAF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 220


>gi|153868783|ref|ZP_01998526.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
 gi|152074626|gb|EDN71462.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
          Length = 533

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 16/232 (6%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            K+             N+   +  +        S  ++         ++   +  +   +
Sbjct: 20  PKVEPGTTAAYQALFLNSQGIIMAAGAKRGQNASGDQNGGFFTQGFLTSLKTELESPHPS 79

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
           +     + ++ +  ++  ++      I    + +  DN     L            +DQ 
Sbjct: 80  WDTIMANTKEWVQEQKPSQIPQTQVAIQVIGNNIGDDNEYLPPLPSEPTVTTRKLTVDQ- 138

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLS 288
               FD +S+   P     LQ+  + L  S       + + GHTD+        +N  LS
Sbjct: 139 ----FDTNSAELKPFHKSQLQQWEQGLTSSKSLTPPSVRVEGHTDSR---GTDENNMTLS 191

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             RA S  + L++  G S DR   I  +   +L  + +       NRR++I+
Sbjct: 192 ERRATSVKKHLVEELGASSDRFDIIP-YGESQLTASEETEEGRALNRRVEIV 242


>gi|27462205|gb|AAO15380.1|AF330622_1 outer membrane protein [Helicobacter bizzozeronii]
          Length = 172

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F  +SS   P+   VL++  E L        ++ GH D          N  L   R
Sbjct: 62  DRVFFSLNSSSIEPDAEHVLKRQAEWLLRYPHYFVTVEGHADDR---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +    L+  GVS  R+  IS +   R       +   + NRR+ + +   +G
Sbjct: 119 SVAVRDYLVSLGVSSQRMRTIS-YGKERPVAVCDDNSCWNQNRRVVLTINSVKG 171


>gi|39996844|ref|NP_952795.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39983732|gb|AAR35122.1| OmpA domain protein [Geobacter sulfurreducens PCA]
 gi|298505859|gb|ADI84582.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
          Length = 524

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 9/109 (8%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDR 291
              FD        E    L ++ E +      +   I GH D          N  LSL R
Sbjct: 413 DVSFDFDQWSLSAEGKKALSEVAEQIRRDKRWVYLRIDGHADNIGSVG---YNMDLSLKR 469

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A S    L+   G+   R+  + G    +    +        NRR +IL
Sbjct: 470 AISVASYLIAREGIDPSRLF-VKGLGKSKPIGDNKTAEGRKLNRRGEIL 517


>gi|171319197|ref|ZP_02908315.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171095577|gb|EDT40539.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 214

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +L+ +   LA       E++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPEGRDLLKTLAGPLAAYLTTRDEILMVSGFADDQQVRAGNRQFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|159045920|ref|YP_001534714.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12]
 gi|157913680|gb|ABV95113.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12]
          Length = 272

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)

Query: 10  ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
           +    +IIK+K  +    ++ G+WK+ YADF+T +MAFF++MW++NAT +  +K I  YF
Sbjct: 4   DTPAPVIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGIADYF 63

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDL-SIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           NP       +  G          S  +     +     +  S  L+     ++ + Q L 
Sbjct: 64  NPTIPVNRISGGGEGMFGGDNIFSDVSLARSGTGGSENSSRSSQLEALRAAEEARMQALS 123

Query: 129 NNIFYLSNSQQSEHC 143
            ++  LS        
Sbjct: 124 EDLLGLSGESDVAEQ 138



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
            ++     L +S              E + A +  +        +  +    VA+ + + 
Sbjct: 83  DNIFSDVSLARSGTGGSENSSRSSQLEALRAAEEARMQALSEDLLGLSGESDVAEQLRRH 142

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           V    T  G+++ + DQ    +F   S+        +L+ I EV +     +SI GH  +
Sbjct: 143 VSTRVTDRGLVVDLFDQGEATVFVPGSTELTLLGKALLKVIHEVFSVVDNPLSITGHVPS 202

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
            P     RD W +S  RA+ A   L   G +E RI K++G A  +     D ++S N R+
Sbjct: 203 QPVVLRERDAWEVSTSRAHVARSTLESYGFAESRIMKVAGQADRKPAAYPD-ISSKNNRL 261

Query: 335 DILVED 340
           +I++  
Sbjct: 262 EIVLLR 267


>gi|242309734|ref|ZP_04808889.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
 gi|239523735|gb|EEQ63601.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
          Length = 258

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 11/172 (6%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
              P+    I A      + ++   + +  + +        V FE    GI+I I +   
Sbjct: 71  PPQPIQATPIQAETEMDNVMNIFASLITEYNEINKLANGPAVEFEEAEKGIIIRIPEDL- 129

Query: 234 TPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFR--NIARDNWRLS 288
             +F+  S+       I  L++I   L H  + I I+  GHTD +P +      DN  LS
Sbjct: 130 --LFESGSATLSNSNGITFLKRISLELNHLPKEILIKAIGHTDNTPMKKNATFADNLELS 187

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           + R  +   +L+  G+ ++RI    G         +D   + + NRR+D+ V
Sbjct: 188 IARGVNVANLLISQGIDKERII-GGGEGEFSPIANNDIPELRAKNRRVDLYV 238


>gi|149188853|ref|ZP_01867143.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
 gi|148837273|gb|EDL54220.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
          Length = 217

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    +   P     L ++ + L      I+I GHTD++        N  L L RA +  
Sbjct: 107 FGFDQANLTPMGDEALNRLADTLGKQASNITIDGHTDST---GPEGYNQALGLKRALTTS 163

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             L+  GV ++ I  +  F   +    +      + NRR +I V  
Sbjct: 164 DGLISKGVDKNHIV-VRSFGETKPIATNSTTEGRAQNRRSEIWVSS 208


>gi|73537739|ref|YP_298106.1| hypothetical protein Reut_B3905 [Ralstonia eutropha JMP134]
 gi|72121076|gb|AAZ63262.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 215

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 24/177 (13%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +      L KE     +  +R + L K +++ L+      +   +             
Sbjct: 39  GAQMELTARLEKEAKQRQEEMQRRESLEKALAAPLAAGRVTLVNGRIGIN---------- 88

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---A 281
                + +F  +S    P+   VL+     +   L    E++ + G TD    R      
Sbjct: 89  ----GSVLFAINSDQLQPQGRDVLKSLAGPLSAYLRSRDEILMVSGFTDDQQVRERNRRF 144

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            DNW LS  RA +  + L+ +G+    +   + F   +   ++  +   + NRR++I
Sbjct: 145 ADNWELSAQRALTVTRALIDAGIPAASVFSAA-FGAEQPVTSNADEAGRARNRRVEI 200


>gi|300714997|ref|YP_003739800.1| outer membrane protein [Erwinia billingiae Eb661]
 gi|299060833|emb|CAX57940.1| Outer membrane protein [Erwinia billingiae Eb661]
          Length = 564

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 8/115 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           I+   +  +FD   ++  P ++ +L      +       I + GHTD++        N +
Sbjct: 426 IVRLDSLSLFDTGKAVLKPGSLKMLVTALVDIKARPGWLIVVAGHTDST---GNVLANQQ 482

Query: 287 LSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           LSL RA +     L  S VS      + GF   R    +D     + NRR++I +
Sbjct: 483 LSLTRADALRDWMLSTSDVSPT-CFAVQGFGASRPIATNDTPAGRALNRRVEISL 536


>gi|111223535|ref|YP_714329.1| hypothetical protein FRAAL4134 [Frankia alni ACN14a]
 gi|111151067|emb|CAJ62776.1| conserved hypothetical protein; putative OmpA/MotB domain [Frankia
           alni ACN14a]
          Length = 252

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 18/259 (6%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                    S  +  T         +          + +   L    Q      +     
Sbjct: 4   AGGCGGSPGSRGDASTAPRTSRAAATAQPAASTPSADPSASALPPGAQPGLHDVTGDGTP 63

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           +                   ++     + E    +     L  L       L+G+  +N+
Sbjct: 64  DPTCGTQDFGAGLVLRLPCGDFSQYAHTPEDGTRLVAN-SLYRLPGPDDVDLTGISGENL 122

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
                       ++ +     +T  F   S+  L  TI ++             I +RGH
Sbjct: 123 AATDAAGRETFILIFNSDALFDTGSFAIGSTDTLDATIRLINSHYA-----GGDIQVRGH 177

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------- 324
           TDA+     A  N  LS  RA +  + L+  G+    ++ + G                 
Sbjct: 178 TDAT---GSAASNQTLSERRADTVRRYLVDHGIRASSVTSV-GLGSTHPLAEEANPDGSP 233

Query: 325 DPMNSA-NRRIDILVEDRQ 342
           DP     NRR++++V   Q
Sbjct: 234 DPEGQRFNRRVELVVRSHQ 252


>gi|325927851|ref|ZP_08189076.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           perforans 91-118]
 gi|325541841|gb|EGD13358.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           perforans 91-118]
          Length = 368

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            MF   S+    +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA 
Sbjct: 258 SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 317

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           S   VL  +G+ + R  + SG    +        P   + NRR++IL+
Sbjct: 318 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 364


>gi|300698137|ref|YP_003748798.1| transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum
           CFBP2957]
 gi|299074861|emb|CBJ54429.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
           solanacearum CFBP2957]
          Length = 215

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS      +K+++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVGSNADDEGRAKNRRVEI 200


>gi|167572993|ref|ZP_02365867.1| hypothetical protein BoklC_24368 [Burkholderia oklahomensis C6786]
          Length = 215

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      +K+++      K +   L+G +A            R  ++   I    + +
Sbjct: 43  ELSSRLDAEVKQRQMETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P    +L+     +   L  + E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +    +  D   + NRR++I
Sbjct: 153 KRALTVTRAFIAEGVPASSVFAAA-FGSEQPVSPNSDDEGRAKNRRVEI 200


>gi|28868377|ref|NP_790996.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967171|ref|ZP_03395320.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|301381094|ref|ZP_07229512.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302062421|ref|ZP_07253962.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
 gi|302133214|ref|ZP_07259204.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28851615|gb|AAO54691.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213928013|gb|EEB61559.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
 gi|330965011|gb|EGH65271.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|331018068|gb|EGH98124.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIIGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADANGRAQNRRVEVNLKPIPG 226


>gi|115523809|ref|YP_780720.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115517756|gb|ABJ05740.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 446

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E++ VL+K+G +L       I + GHTD          N  LS  RA + 
Sbjct: 343 FQPRSAEISKESLPVLEKLGAILVQCPAVTIEVAGHTD---GGGKKAKNQALSERRAEAV 399

Query: 296 YQVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L K+  GV   +++ + G+   +   ++D       NRRI+ +V+
Sbjct: 400 VASLTKAKIGVGSAKLTAV-GYGSAKPIASNDTPEGRANNRRIEFVVK 446


>gi|303240559|ref|ZP_07327075.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
 gi|302591961|gb|EFL61693.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
          Length = 556

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 61/186 (32%), Gaps = 14/186 (7%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
             E S              E++L       +   A +           +           
Sbjct: 381 SQEVSSKGYLGNVKNSEGIEELLVGAVDSEISGSASQAEEKKKEFKQQDAQSIEKNTERV 440

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
             + I          +D   +    E+I VL ++ E+L+   E    I  HTD       
Sbjct: 441 AKVDIP------PVYYDSGKATVKAESIAVLNQVKEMLSQFPEYYLIIDAHTDTV---GN 491

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDIL 337
             +N +LS DRA    + L++ GV E RI    G+   R  +  +      + NRR + +
Sbjct: 492 NENNLKLSKDRADEVKKYLVQKGVDEKRIIA-RGWGEDRPIVPKESTEGDKAKNRRTEFI 550

Query: 338 VEDRQG 343
           +    G
Sbjct: 551 LTREIG 556


>gi|149916697|ref|ZP_01905199.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149822414|gb|EDM81803.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 520

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 61/235 (25%), Gaps = 11/235 (4%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           +   +G    K       +       +                            + ++ 
Sbjct: 280 LSFTLGRQKPKPIVPEDPDRDKDGFENAVDSCPDTPGVSPDGCPPRDTDEDGWIDTEDEC 339

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
                       I        L D    I         +               +     
Sbjct: 340 PYEAGVEPDGCPIRDTDGDGILDDTDACIDE---PEKVNGYKDEDGCPDEVPIAVREFTG 396

Query: 231 QRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
                 F+ +S+      +  VL    +VL    E+   + GHTD          N +LS
Sbjct: 397 VIEGIEFEYNSATIREGKSKEVLDAAIKVLEEYPEIRIKVVGHTDNQ---GTPEYNKKLS 453

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            DRA +  Q L + G++EDRI    G         ++     + NRR +  +  +
Sbjct: 454 TDRADAVKQYLAEGGIAEDRIETF-GAGQSDPLTTNETEEGRAKNRRTEFEIIKK 507


>gi|71733414|ref|YP_273324.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|289627857|ref|ZP_06460811.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648335|ref|ZP_06479678.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71553967|gb|AAZ33178.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|330868443|gb|EGH03152.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330988549|gb|EGH86652.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331008919|gb|EGH88975.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|254254994|ref|ZP_04948311.1| Flagellar motor protein [Burkholderia dolosa AUO158]
 gi|124899639|gb|EAY71482.1| Flagellar motor protein [Burkholderia dolosa AUO158]
          Length = 214

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSQLDEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +L+     +   L    E++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPEGRALLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F       ++  D   + NRR++I
Sbjct: 152 KRALTVTRSLIDAGVPASSVFAAA-FGSEHPVSSNADDEGRAKNRRVEI 199


>gi|85712856|ref|ZP_01043898.1| OprF [Idiomarina baltica OS145]
 gi|85693320|gb|EAQ31276.1| OprF [Idiomarina baltica OS145]
          Length = 362

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 66/200 (33%), Gaps = 8/200 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               +     D  +G             N        P + +        ++  D     
Sbjct: 153 EGGVQQGFDEDYTEGFANVGLQYFFGGRNAVTEAKPRPAAAQPTETTPAPQQTMDSDNDG 212

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                   AD   +  +     T      + ++    FD  SS    + +  + ++ E +
Sbjct: 213 VIDSRDKCADTPRRYSVDADGCTMYENETVREQLLVEFDFDSSQVRKDAMEPIAEMAEFM 272

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317
               +  ++I GHTD       A  N  LS  RA S   VL++  G+S  RI+ + G   
Sbjct: 273 NEHPQLDLTIHGHTDKI---GDAEYNQWLSQRRAESVKNVLVESYGISASRINTV-GHGE 328

Query: 318 HRLKIASDP--MNSANRRID 335
            + K+  D       NRRI+
Sbjct: 329 SQPKVKGDSPADRQENRRIE 348


>gi|153834734|ref|ZP_01987401.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
 gi|148868823|gb|EDL67889.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
          Length = 222

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 18  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  E      L  ++   N   F  SS          L+ 
Sbjct: 78  VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDSSIHNTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 136 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAPGRAIA-R 191

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G+       ++        NRR++I + 
Sbjct: 192 GYGERNPICSNQTSEGRACNRRVEIQIL 219


>gi|83643665|ref|YP_432100.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83631708|gb|ABC27675.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 494

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 70/234 (29%), Gaps = 12/234 (5%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           + ++    Q    +              +E               L ++   E       
Sbjct: 265 EARLAEAVQPVVSEIPFEKGSAQVKESINEALNRLQQEKLTLRHALTEAEVREVQSAASL 324

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 + ++ +        ++   ++I      +     +           +LI     
Sbjct: 325 ETMKQEMEQKLLAVQLETDAVKRANEEIQRRFEFVQELFTLTEADVYRQNANVLIRAHGF 384

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           +    F   SS    + + +L KI + +         I GHTD          N  LS  
Sbjct: 385 K----FASGSSEVQRDNVTLLNKIIDAIEAFPNCKIRISGHTDNR---GDRALNQSLSEK 437

Query: 291 RAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA +  + L   G +   RI    GF   R    +D     +ANRR+++L+ + 
Sbjct: 438 RASNVAKFLANVGSIDSSRIEA-EGFGASRPVANNDTKEGRAANRRVEVLIIND 490


>gi|315123150|ref|YP_004065156.1| hypothetical protein PSM_B0207 [Pseudoalteromonas sp. SM9913]
 gi|315016910|gb|ADT70247.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 426

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 7/151 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            + +    +++      L  +  +  V       GI I+I  +    +F +  S  LP  
Sbjct: 276 NQTVDKKDQQLRVLEQLLQTEIKMGIVAVAKNSDGIRITINSEN---LFKQGDSQLLPSF 332

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307
             +L+K+   L  +   + I GHTD  P        NW LSL RA     ++ KS     
Sbjct: 333 QPILEKLALSLEGTKGRVLITGHTDDLPISTDKYPSNWHLSLARATQVANLMAKSTNLSG 392

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           R+    G        ++    S   NRRI+I
Sbjct: 393 RLWP-EGKGAAEPIASNSDSASRSLNRRIEI 422


>gi|225024496|ref|ZP_03713688.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
           23834]
 gi|224942771|gb|EEG23980.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
           23834]
          Length = 217

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 234 TPMFDKSS---SIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
             +F           P     L ++   L        I++ GHTD   +      N  LS
Sbjct: 97  DVLFAFDRSSEQDLQPRGREELTELAAQLRNFEQLNSITVIGHTD---YLGSDAYNQNLS 153

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-------NRRIDILVE 339
             RA +  + L   G+  D+I  + G    +      +    S        NRR++I V+
Sbjct: 154 QQRAETVRRYLAAQGLPADKIRAV-GMGESQPVKQCDNHGGRSQLIACLQPNRRVEIQVD 212

Query: 340 D 340
            
Sbjct: 213 G 213


>gi|77918775|ref|YP_356590.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
 gi|77544858|gb|ABA88420.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
          Length = 247

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A      +  L  ++ S L+ L  D   + +     R  +++ + D     +FD  S+  
Sbjct: 76  APMDDDYVSRLYNRVQSMLARLRID---RDIDLVKDRGAVILRVKDA---ILFDAGSTEL 129

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            P  + +L+++  ++     ++ I GHTD     N A  NW +S+ RA +  +      +
Sbjct: 130 KPTALPILREVAGLVKPLPLLLRIEGHTDNQKPANPAITNWDISVQRAVAVLKFFAGEDL 189

Query: 305 SE-DRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
              DR+S + G+   R           + NRR++ ++E+
Sbjct: 190 LPLDRLSAV-GYGDQRPVAPGLGPEQQALNRRVEFVLEN 227


>gi|317491882|ref|ZP_07950317.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920316|gb|EFV41640.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 163

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +       +F  + S   PE+   ++K+G+ LA        + G TD          N +
Sbjct: 51  MFGLSEKVLFGNNKSNLTPESTETVKKMGKTLAQINILHARLDGFTDNY---GDESYNQQ 107

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           LSL RA +    L + G+    ++   G        ++      S NRR+ I++E  
Sbjct: 108 LSLKRANTVADALSQGGIPRMNLTT-RGMGESHPIASNSTKQGRSENRRVAIVIEAP 163


>gi|183222506|ref|YP_001840502.1| hypothetical protein LEPBI_I3161 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912543|ref|YP_001964098.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167777219|gb|ABZ95520.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780928|gb|ABZ99226.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 475

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 78/264 (29%), Gaps = 9/264 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T +     E+  PE          I  + T    +  +      +     ++      + 
Sbjct: 215 TGTVFFNAEKGVPEFKEVKLSYTFIYPNGTVQEANFLVKGVYFLRNQVNAKDKESIREDI 274

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                   +        +   +        N+     LPP S E                
Sbjct: 275 LNDLIVGYTRDGLPNGKRIQKRQRPGLGDPNQNLEGRLPPQSTEIPEMTDGVTHPDVKEN 334

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                 +  + D                  I+   ++ +FD + S    +    + KI E
Sbjct: 335 P---DPNSPIDDPNQIAEQLPVKVRTTEDGIVFSLDSILFDFNDSKLKVDAESAVAKIAE 391

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L    +  I + GHTD          N +LS +RA S    L+ +   +++     G+A
Sbjct: 392 ILKKYPDREIRVSGHTDNI---GKKEYNQKLSEERAKSVLHSLVDNHKMDEKHISFRGYA 448

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                  +D   +   NRR++I +
Sbjct: 449 DEFPVAPNDSEENRHKNRRVEITL 472


>gi|226945712|ref|YP_002800785.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
           vinelandii DJ]
 gi|226720639|gb|ACO79810.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
           vinelandii DJ]
          Length = 179

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L      L  +   + + GHTD          N  L   RA +  
Sbjct: 80  FEYDSSDLKPEAMRALDVHARDLKGNGARVVLEGHTDER---GTREYNMALGERRAKAVQ 136

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           + L+  GVS  ++  +S +   R     A +   + NRR+++
Sbjct: 137 RYLVLQGVSPAQLELVS-YGEERPVAGGADEQSWAQNRRVEL 177


>gi|313201307|ref|YP_004039965.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|312440623|gb|ADQ84729.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 222

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   S   P    VL    + L A+    ++I GHTD +        N  LS
Sbjct: 104 DIPSDISFDSGKSDIKPNFRPVLDSFAQSLVANPATKVTIVGHTDNT---GTDAVNNPLS 160

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           L+RA  A   L+  GV+  R +   G   H   + ++     + NRR++I V + Q
Sbjct: 161 LNRANHARDYLVTRGVASSRFTT-EGRGSHEPLVENNSDANRAKNRRVEIFVAEPQ 215


>gi|254411320|ref|ZP_05025097.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
 gi|196181821|gb|EDX76808.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
          Length = 293

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 14/261 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           GI      P  + +    L +  H  +    +   +T                   QQ +
Sbjct: 44  GIVLATFYPRTNPEKPFFLKMASHFEEQMPVVSPHTTPTSIPEPTGSPPQLTPVQRQQVQ 103

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                L        +   + +++   ++        L    +     +   ++       
Sbjct: 104 AQLTQLQGQLRSLSEGVATLEVQLGSSRPNESLEARLQAIALQLEGVQPPPEEATSN--- 160

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             +   A  +        +   + +++       +F+ ++S+  PE  ++L KI   L +
Sbjct: 161 -GNNPNATVMAASSDSFGSSQTLKVTLPSD---VLFEGNNSLLRPEAGLILDKIIADLRN 216

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                I I  HTD+        DN  LS  RA +  Q   ++   + R   + G+   R 
Sbjct: 217 YPSSTIRIAAHTDSQ---GEPEDNRELSFRRAKAVEQYFARALGDDYRWL-VVGYGEIRP 272

Query: 321 KIASDPMN--SANRRIDILVE 339
            +A+D       NRRI+I VE
Sbjct: 273 LVANDTDANQQRNRRIEISVE 293


>gi|330961787|gb|EGH62047.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|167576586|ref|ZP_02369460.1| unnamed protein product; Similar to putative exported protein
           [Burkholderia thailandensis TXDOH]
          Length = 541

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F    +   P  +    +     +LA+  + + I GH+D+         N +LS  RA 
Sbjct: 424 LFATGQATFSPGAVQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 480

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +     +  GV + R   + G         +      + NRR++IL+   
Sbjct: 481 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRALNRRVEILLIPD 529


>gi|302189107|ref|ZP_07265780.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|294673757|ref|YP_003574373.1| OmpA family protein [Prevotella ruminicola 23]
 gi|294474249|gb|ADE83638.1| OmpA family protein [Prevotella ruminicola 23]
          Length = 226

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 7/149 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+        A    +            + +       +F  + +     +   LQ+  
Sbjct: 70  KKMDKAKKEAEAVKNAQVETITDANGLEAVKVTFDSG-ILFATNKADLNASSKSSLQQFA 128

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL +++     I GHTD +        N  LS++RA S    L   GV   +I  + G 
Sbjct: 129 TVLKNNSACDVAIYGHTDNT---GSDAINNPLSVNRAKSVSNYLKSLGVPASQIKSVDGQ 185

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342
                   +        NRR+++ +   +
Sbjct: 186 GSTNPVADNSTAEGRKQNRRVEVYMYASE 214


>gi|163855060|ref|YP_001629358.1| putative lipoprotein [Bordetella petrii DSM 12804]
 gi|163258788|emb|CAP41087.1| putative lipoprotein [Bordetella petrii]
          Length = 215

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD   ++  P  + VL  +   L    E    + GHTD++     A  N  LS +
Sbjct: 105 PSNVSFDTDKAVLKPALLPVLDSVARALNQHPELRAKVVGHTDST---GSAAHNQTLSEN 161

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA S    L K GV+  R+  I G A       +        NRR+++ +
Sbjct: 162 RARSVTDYLGKQGVAPARM-TIEGRAARDPIGDNATAEGRAANRRVEVYL 210


>gi|187919198|ref|YP_001888229.1| hypothetical protein Bphyt_4485 [Burkholderia phytofirmans PsJN]
 gi|187717636|gb|ACD18859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 215

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+ +   L+           + G TD    R       DNW LS 
Sbjct: 93  FALNSDQLQPQGRDLLKSLAGPLSAYLGANDEILMVSGFTDDQRLREGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNTDEQGRAKNRRVEI 200


>gi|261210647|ref|ZP_05924939.1| outer membrane protein [Vibrio sp. RC341]
 gi|260840132|gb|EEX66712.1| outer membrane protein [Vibrio sp. RC341]
          Length = 223

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  SS          L+ + 
Sbjct: 84  DQQEAELRKALLDSGVQVVRVGENQLLLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLAQGVAAGRAIA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  ++        NRR++I + 
Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220


>gi|163741717|ref|ZP_02149107.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
 gi|161384890|gb|EDQ09269.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
          Length = 183

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +        +I     +   F  +           L++  +   
Sbjct: 50  VMDDGAEGFMTPHVTRDGKPVCRRGNICGVMPSDQFFATNRHRISAAGQQRLREFFQTAN 109

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +    I GHTD+         N RLS  RA +  +V    G    RI ++ G+     
Sbjct: 110 ARS--FIITGHTDSR---ASDEYNMRLSQRRANAVAKVGQSVG---ARILEVRGYGERDP 161

Query: 321 KIASDPMN--SANRRIDIL 337
           ++ +D     + NRR++I+
Sbjct: 162 RVPNDSAANMAQNRRVEII 180


>gi|307823763|ref|ZP_07653991.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307735057|gb|EFO05906.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 322

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 81/281 (28%), Gaps = 10/281 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +         ++G+  +                           K  + + + +   LE 
Sbjct: 44  HESANAPKKTNEGLELKHTQSPAVDDGLQPPITQLQGEVTQNQAKGLTESAQNKGLELEP 103

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               +    Q    +       +  K L +ST  +    +     +   S+  I   + +
Sbjct: 104 TQSPVDEGSQPPITQPQGEVTPDLAKGLTESTQNKGLELEPTQSPIDEGSQSAITQPQGE 163

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                      S      +         + +     +S++       F      P     
Sbjct: 164 VTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL-VLGGGFFSSGQITPRANIQ 222

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSG 303
             +  I  ++     + + + GH D       +       N  +SL RA +  QVL K G
Sbjct: 223 DAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENISLRRANAIAQVLKKKG 282

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           ++ DRI  + G        ++   +    NRR++I +   Q
Sbjct: 283 IASDRII-VHGLGDTVPLASNLTYDGRMKNRRVEIKLLPAQ 322


>gi|300718501|ref|YP_003743304.1| OmpA family protein [Erwinia billingiae Eb661]
 gi|299064337|emb|CAX61457.1| OmpA family protein [Erwinia billingiae Eb661]
          Length = 500

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R + LAK  +     + +  +           GI+  + D     MFD  S+    + 
Sbjct: 78  QNREKALAKIAAEEHIVISSSPLQAQESGGKKDVGIVAQVEDN---GMFDTDSAQLSVDG 134

Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +  ++K+  V+       V+ I GHTDA+     A  N +LS  RA S  +VL ++G++ 
Sbjct: 135 LRQVRKLAAVMKQDDQQGVVLIVGHTDAT---GNASWNQKLSESRAQSVGRVLQQAGLNP 191

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            R+    G    R    +  +     NRR++I+
Sbjct: 192 QRLY-FQGAGSSRPIADNATLAGRSANRRVEIV 223


>gi|152986859|ref|YP_001349884.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa PA7]
 gi|150962017|gb|ABR84042.1| peptidoglycan associated lipoprotein OprL [Pseudomonas aeruginosa
           PA7]
          Length = 169

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 70  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 126

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R           + NRR+++
Sbjct: 127 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 167


>gi|320325748|gb|EFW81809.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327336|gb|EFW83350.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330881603|gb|EGH15752.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|326403344|ref|YP_004283425.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
 gi|325050205|dbj|BAJ80543.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
          Length = 215

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           + + +    L       GV    T    + +++        F   S+   P    +L ++
Sbjct: 69  QHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAG---FATGSATLNPRLYPILDQL 125

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           G+ L  +  E + I G+TD++        N+ LS +RA S    L+  G+S  RI    G
Sbjct: 126 GQGLQQNPTETVQIIGYTDST---GSNAINYPLSDNRAASVKTYLVSRGISGQRI-ATRG 181

Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338
                   ++      +ANRR+DI V
Sbjct: 182 MGPQDPVASNATAAGRAANRRVDIYV 207


>gi|58582662|ref|YP_201678.1| hypothetical protein XOO3039 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58427256|gb|AAW76293.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 438

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 12/158 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244
           L+ +A  I + +       +   +  E     + +             +  MF   S+  
Sbjct: 278 LERVALPIPAAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAEL 337

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA S   VL  +G
Sbjct: 338 DADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVL-AAG 396

Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           + + R  + SG    +        P   + NRR++IL+
Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|110639902|ref|YP_680112.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282583|gb|ABG60769.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 505

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F+++S   L  ++  L ++  V+     +I  + GHTD       A+ N  LS +R
Sbjct: 398 HNVLFERTSYELLSSSLPALDQLVTVMNQYPGMIIELSGHTDNV---GSAKKNMELSKNR 454

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             SA + L+  G+S DRI  + G+       ++D   +   NRR+++ +
Sbjct: 455 VESAKKYLVSKGISADRIKSV-GYGSKYPVASNDGEQTRKYNRRVELRI 502


>gi|153007835|ref|YP_001369050.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559723|gb|ABS13221.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 200

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 15/134 (11%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271
             +    T   I++S+       +FD  S+    +    L  I ++L    +  + + G+
Sbjct: 71  GNITMRETEDSIVLSVTSD---VLFDFDSAKLTGKAKATLTDIAKILESMPDSAVRVVGY 127

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------ 325
           TD+   +     N +LS  RA +  + L+ +GV   R+    G         ++      
Sbjct: 128 TDS---KGADSYNDKLSKSRADAVTKFLVNNGVQSARLKP-EGRGESEPVAPNEIKGKDN 183

Query: 326 -PMNSANRRIDILV 338
               + NRR++ ++
Sbjct: 184 PDGRAQNRRVEFVL 197


>gi|83646323|ref|YP_434758.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83634366|gb|ABC30333.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 483

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 12/208 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +  K  + + +   + L    D      +        ++ EK   M +++R     + I
Sbjct: 279 DQPNKEVVRQVNANIQGLMVDRDSALLALENAKTREMRVASEKDELMAQQQREDQRKQAI 338

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++  + + +    K       +  +LI          F    S    E   ++ KI E +
Sbjct: 339 TAKFAVVQSLFTDKEADVYRQKDNVLIRAHGFN----FPSGKSEIQGENFALVNKIIEAV 394

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAH 317
                  + + GHTD          N  LS  RA    ++L + G +  D+I+ + G+  
Sbjct: 395 KEFPNAQVVVSGHTDNR---GSTELNQGLSQQRAEEVAKMLNEIGRIPSDKITAM-GYGE 450

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQG 343
            R    +D M     NRR+++L+ +  G
Sbjct: 451 QRPVSTNDTMEGRADNRRVEVLIVNEGG 478


>gi|319952094|ref|YP_004163361.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319420754|gb|ADV47863.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 370

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             V      +     +       +FD   +    +    L  +   L  + +  + + GH
Sbjct: 231 DMVSVTLIPSYTQNQLY-VIEELLFDFDETSIEIDYNQQLSDLVTYLKSNPKLNVYLYGH 289

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329
           TDA       + N  LS  RA +    L+KSG+S++RI    GF   +  ++++      
Sbjct: 290 TDAM---GSVKYNDDLSEKRAATVASFLVKSGLSKNRI-SWKGFGFKKPVVSNEKEDIRF 345

Query: 330 ANRRIDILVEDRQ 342
            NRR++ LV + Q
Sbjct: 346 KNRRVEFLVAEPQ 358


>gi|330951040|gb|EGH51300.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 229

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|316935074|ref|YP_004110056.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602788|gb|ADU45323.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 446

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            ++ +       F++ S++    +  +L K+   +       I + G+TDA         
Sbjct: 333 RVTAVASAEKINFERRSAVIDKASQPLLGKLAAAIKQCPAVTIEVAGYTDA---AGKKST 389

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           N  LS  RA +    L K+G+   ++    G+   +   ++D     + NRRI+ +V+
Sbjct: 390 NLALSKRRAEAVVASLTKAGIGSVKLVA-EGYGSAKPIASNDTAEGRAQNRRIEFVVK 446


>gi|322830754|ref|YP_004210781.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
 gi|321165955|gb|ADW71654.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
          Length = 220

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD +SS   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDTNSSTLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N +LS  RA      L+  GV   R+   +G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GTRALNMKLSQQRADGVGSALITQGVEGSRVHT-TGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                  +      + NRR++I +
Sbjct: 193 PDNPIAGNSTEAGKAQNRRVEITL 216


>gi|298481010|ref|ZP_06999205.1| lipoprotein PG3 [Bacteroides sp. D22]
 gi|298273033|gb|EFI14599.1| lipoprotein PG3 [Bacteroides sp. D22]
          Length = 255

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 91  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 149

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 150 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 209

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 210 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 244


>gi|28871116|ref|NP_793735.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71736967|ref|YP_275906.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257487003|ref|ZP_05641044.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289626503|ref|ZP_06459457.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650949|ref|ZP_06482292.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298488202|ref|ZP_07006238.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|301384813|ref|ZP_07233231.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302063533|ref|ZP_07255074.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato K40]
 gi|302130603|ref|ZP_07256593.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28854366|gb|AAO57430.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71557520|gb|AAZ36731.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298157260|gb|EFH98344.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323045|gb|EFW79134.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329683|gb|EFW85672.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330868619|gb|EGH03328.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330872646|gb|EGH06795.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330877972|gb|EGH12121.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330964831|gb|EGH65091.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330988976|gb|EGH87079.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009355|gb|EGH89411.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331016446|gb|EGH96502.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 166

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164


>gi|115360943|ref|YP_778080.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115286271|gb|ABI91746.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 239

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++        L K+           + + G+TDA+     A  N  LS  R
Sbjct: 133 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVDVDGYTDAT---GSAAHNQALSKRR 189

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 190 ADAVAAYLREHGLKADAF-AATGHGEANPAASNDTAEGRARNRRVEISLQK 239


>gi|163784521|ref|ZP_02179383.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880207|gb|EDP73849.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 75

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I GHTD +      + N  LSL RA    ++ +  G S D +  + G+   R    +   
Sbjct: 2   IEGHTDNT---GSYKLNLDLSLKRALYIMKMFISCGFSPD-LLSVRGYGPSRPIADNSTP 57

Query: 327 -MNSANRRIDILVEDRQ 342
              + NRR++ +++ ++
Sbjct: 58  KGRAKNRRVEFVIKTKE 74


>gi|172062592|ref|YP_001810243.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995109|gb|ACB66027.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 214

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++     K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P+   +L+ +   LA       E++ I G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPDGRDLLKTLAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|332527567|ref|ZP_08403614.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332111970|gb|EGJ11947.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 214

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 244 PLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             PE    L  +          + I  GHTDA+        N +LS+ RA +    L+  
Sbjct: 114 LKPEAKAKLDDLAAKAKAVNLEVVIAVGHTDAT---GPDGYNQKLSVKRADAVKAYLVDQ 170

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+ ++R+    G    +    +      + NRR++I V   +
Sbjct: 171 GIEKNRVYT-EGKGEKQPVADNKTREGRAKNRRVEIEVVGTR 211


>gi|289668951|ref|ZP_06490026.1| OmpA family protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 200

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            MF   S+    +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA 
Sbjct: 90  SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 149

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           S   VL  +G+ + R  + SG    +        P   + NRR++IL+
Sbjct: 150 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 196


>gi|163786625|ref|ZP_02181073.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
           ALC-1]
 gi|159878485|gb|EDP72541.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
           ALC-1]
          Length = 283

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 17/254 (6%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E                       I          ++++    +         K  +++D
Sbjct: 29  ENGEIKSELTKTRVEKEDLENKFAIIEKRVSDYNTKIQSLNEDVEGLAIENKAKFEVSKD 88

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                 + K        N +         ++   A   K  +    +   S        N
Sbjct: 89  GTVASGVSKEKMRATLQNVDP--------EKLAGAKTLKDSMNLAVQHNLSKAMNTEDLN 140

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             + ++ +   T ++ISI D     +F+ +S     +   +L+K+ +V+       + + 
Sbjct: 141 EDEDIVVDINDTVVMISIADDM---LFNTASYRVSNKADKILKKLADVINSEPSLDVMVE 197

Query: 270 GHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP- 326
           GHTD+         DNW LS+ RA S  + L K   V+ +++   SG + ++  + +D  
Sbjct: 198 GHTDSRSINTAKVSDNWELSVLRATSVVKKLQKQFKVAPEQLIA-SGRSSYQPLVENDSR 256

Query: 327 -MNSANRRIDILVE 339
              + NRR  I++ 
Sbjct: 257 DNRAKNRRTRIILM 270


>gi|46580633|ref|YP_011441.1| motB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120602060|ref|YP_966460.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46450052|gb|AAS96701.1| motB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562289|gb|ABM28033.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311234364|gb|ADP87218.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 244

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 64/159 (40%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++ ++   +  +   +    + +   +        I + +    +  +F   +    P 
Sbjct: 87  QRELIEAQRQTYNEMRTYFTVNGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPG 143

Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304
              VL  + +  +    + I+I+G TD       AR  DNW +S  R+ +  +  + +G+
Sbjct: 144 ADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI 203

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
              R++  +G         +  D   + NRR++ ++E R
Sbjct: 204 EPARLTA-TGLGELDPLFPNTSDENRARNRRVEFVLERR 241


>gi|126461330|ref|YP_001042444.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126102994|gb|ABN75672.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 213

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   PE    L++  + +    E    + GHTD          N RL L RA + 
Sbjct: 69  FPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTD---LVGSEAYNKRLGLRRAKAV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  +   R  I        NRR
Sbjct: 126 VAYLASQGISPARLEALVSYGETRPVIPVAAPEERNRR 163


>gi|86130772|ref|ZP_01049371.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818183|gb|EAQ39343.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 293

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 10/251 (3%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
           Q++ D +            +I +     + +  + N    +    +   + S     E  
Sbjct: 33  QSEYDTTKVTLTKTKVEKEEIKAKYAAIEQRVDDYNNKINALKDTNTDLQASNDSKFEIT 92

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
            +    ++  K   +     + P    +   ++    L    K   +    +  +N  + 
Sbjct: 93  TNGTVMSENTKKKLRAALANVDPSELAQAQTLEDSMNLAVSHKLKRNLDRDVYGNNASQD 152

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTD 273
           +  +   T + ISI D+    +F   S     E   +L++I  V+       + + GHTD
Sbjct: 153 INIDIDDTVVQISISDKM---LFRSGSYRVSKEADDLLKRIAAVVNSEPAVEVMVEGHTD 209

Query: 274 ASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN-- 328
           +   +  +   DNW LS+ RA +  + L     V   ++   SG + +   + ++     
Sbjct: 210 SRTVKKGSYLKDNWDLSVQRATAIVRELQNNHNVDPAKLIA-SGRSSYVPLVENNSKENM 268

Query: 329 SANRRIDILVE 339
           S NRR  IL+ 
Sbjct: 269 SRNRRTRILIL 279


>gi|311696306|gb|ADP99179.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 402

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS+        ++++ + +  + E I  I GH+D+      A  N  LS  RA + 
Sbjct: 297 FPTNSSVIGNAYDEEIRRVADFMQENPETIVEIAGHSDSR---GDADYNQFLSQRRAEAV 353

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              L    GV   R+  + G+   +   +++     +ANRR++  ++ R+
Sbjct: 354 AGRLTGPLGVDPARVEAV-GYGEEQPIASNNTADGRAANRRVEARIQVRR 402


>gi|323528476|ref|YP_004230628.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323385478|gb|ADX57568.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 217

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 46  ELSNKLEQEVKQRQLETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L  + +++ + G TD    R       DNW LS 
Sbjct: 96  FALNSDQLQPQGRDLLKSLAGPLSAYLRANDQLLMVSGFTDDQRLREGNRRFADNWELSA 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  +   + NRR++I
Sbjct: 156 QRALTVTRALIDAGVPASSVFAAA-FGSAQPVSSNADEQGRARNRRVEI 203


>gi|262165460|ref|ZP_06033197.1| outer membrane protein [Vibrio mimicus VM223]
 gi|262025176|gb|EEY43844.1| outer membrane protein [Vibrio mimicus VM223]
          Length = 193

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +  + L   + D+ V+ V     +  + +      N   F  SS          L+ + 
Sbjct: 54  DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 108

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     G 
Sbjct: 109 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 164

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                  ++        NRR++I + 
Sbjct: 165 GERFPLCSNSTAEGRACNRRVEIQIL 190


>gi|311748659|ref|ZP_07722444.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Algoriphagus sp. PR1]
 gi|126577188|gb|EAZ81436.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Algoriphagus sp. PR1]
          Length = 643

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 8/139 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L+ +     +        +++          +D   +   P+  V L K+ ++L  + 
Sbjct: 504 EDLIQEVTNITLDTTIVLDQLILDKSIVLENIYYDLDKADIRPDAAVELDKLVQILKDNP 563

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            +   +  HTD     +    N  LS  RA SA   ++  G+S DR+    G+   +L I
Sbjct: 564 SIKIELSSHTDDR---SSDEYNQDLSQRRAQSAVDYIVSQGISADRLVA-KGYGESQLII 619

Query: 323 ASDPMNSA---NRRIDILV 338
            +         NRR +  V
Sbjct: 620 ENATTEEEHQTNRRTEFKV 638


>gi|110639097|ref|YP_679306.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281778|gb|ABG59964.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 648

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
              V+ + T T   I+  +   T  F+ + +    E    L ++G  L    E  + I G
Sbjct: 522 KDSVIHKVTDTIKTIAAAEIAKTVYFESNRADLNAEAKTELNQLGIYLDTHKEANVYISG 581

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
           H DA      A  N  LS  RA +A   L   G+S  RI  +  F   +    +      
Sbjct: 582 HADAL---GSAAINNALSQKRAQAAAVYLKAKGISAARIK-VESFGSEKPVETNATVEGR 637

Query: 329 SANRRIDILVE 339
           + NRR+ I+V+
Sbjct: 638 AKNRRVQIVVK 648


>gi|149276390|ref|ZP_01882534.1| possible outer membrane protein [Pedobacter sp. BAL39]
 gi|149232910|gb|EDM38285.1| possible outer membrane protein [Pedobacter sp. BAL39]
          Length = 620

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + +          FD +    LPE++  L  +  +L  +    + I+GHTD 
Sbjct: 496 VVEIYLQKLKVGTNMVLKNIFFDTNDFKLLPESVSELSTLLNLLKSNPNVQMEIQGHTDN 555

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
                  + N +LSL+RA + Y+ L+ + +   R+ +  G+   +  +A+D       NR
Sbjct: 556 V---GNDQLNEQLSLNRAKAVYEYLLDNQIDPQRL-QYKGYGAKKPVVANDTEDNRRLNR 611

Query: 333 RIDILVED 340
           R   ++  
Sbjct: 612 RTSFVITK 619


>gi|126739844|ref|ZP_01755535.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
 gi|126719076|gb|EBA15787.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
          Length = 791

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 16/220 (7%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
                       +    G+DL  +     S  +          K             +  
Sbjct: 573 DDYEARDAAQRVQLQNLGQDLNAALARAASEERRRRLLEEKERKRLEAEAAALASKAEEL 632

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQK 254
           +  +  L    ++   +       + G+ I        +  +F   S+         + K
Sbjct: 633 ENKAQDLERYRSEFFGRLRDVLGKQEGVRIEGDRFVFASEVLFPPGSADLSAAGQAEIGK 692

Query: 255 IGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-G 303
           + ++L             +I + GHTD +         DNW LS  RA S  + ++++ G
Sbjct: 693 VAQILQSVVVEIPAEINWIIRVDGHTDNTTMLGHPKYSDNWELSQGRALSVVRYMIENLG 752

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +   R+   +GF   +   ++D     + NRRI++   +R
Sbjct: 753 IPPGRL-AANGFGEFQPVNSADTPEARAQNRRIELKFTER 791


>gi|330829325|ref|YP_004392277.1| OmpA family protein [Aeromonas veronii B565]
 gi|328804461|gb|AEB49660.1| OmpA family protein [Aeromonas veronii B565]
          Length = 162

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  N  +F  +     P+T   ++K+G+ L     +   + GHTD +     +  N +LS
Sbjct: 52  DLANRVLFANNVGALNPQTRQSVEKLGKTLLGVGLDKARVDGHTDNT---GESSYNQQLS 108

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L RA S   VL+  G+    + +I G         +      +ANRR+ I++ D
Sbjct: 109 LKRAQSVADVLVSVGMKPANL-EIHGRGETMPLADNKTREGRAANRRVAIVISD 161


>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
 gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
          Length = 352

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E    L+ I + L +     + + GHTD+         N +LS +RA + 
Sbjct: 236 FAFDSNTLTAEDQARLEPIAQRLVNFPNSELVVIGHTDSR---GSEAYNQKLSEERAKTV 292

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              LMK   +   R+    G        ++D     + NRR+D+ 
Sbjct: 293 AVYLMKHFNIDASRVK-GEGRGELDPVASNDTAEGRAQNRRVDVT 336


>gi|330975320|gb|EGH75386.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 167

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 68  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165


>gi|171911103|ref|ZP_02926573.1| outer membrane protein [Verrucomicrobium spinosum DSM 4136]
          Length = 479

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 14/162 (8%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLP 246
             ++L    + I   LS L+ADN     +     T ++ +     +  + F+   ++  P
Sbjct: 321 EMEKLASGWRIIGLNLSRLLADNARSSAMVGIPYTPLVQNPKGGESIALYFEYDQAVLHP 380

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                L  +  +L  S      I GHTDA   +   + N  LS  RA +  Q  +  GV 
Sbjct: 381 RAQAQLNIVASILKASPSKNLKIGGHTDA---KGSDQYNVALSQRRAAAVKQYFLDQGVP 437

Query: 306 EDRISKISGFAHHRLKIASD--------PMNSANRRIDILVE 339
             ++  + GF        +            S NRR +IL++
Sbjct: 438 PLQVETV-GFGKALPLSPNANPDGSDNPEGRSRNRRAEILLD 478


>gi|299069126|emb|CBJ40378.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
           solanacearum CMR15]
          Length = 279

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D +     +     +  G     +  +              +   +  +         
Sbjct: 36  PGDPAPVSAASPVPGQVVAGGMVPDEATKANVLARLRELYGSANVVDQIEVGNVVSPPNW 95

Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                K    +          +          ++ + + Q LA  +++TL          
Sbjct: 96  TGNVQKILSPQIKQVSRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 155

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            V   + ++ +  ++ ++     F+  S+   P+   +L ++  VL         I GHT
Sbjct: 156 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 213

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D          N  LS  RA +    L+  G     ++ I G    +    +  D   S 
Sbjct: 214 DN---SGSRAMNLNLSQARAETVKSYLISKGAEPGTLTAI-GVGPDQPVAPNATDEGRSR 269

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 270 NRRIEF 275


>gi|146275632|ref|YP_001165792.1| OmpA/MotB domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322323|gb|ABP64266.1| OmpA/MotB domain protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 291

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 74/268 (27%), Gaps = 9/268 (3%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G    Q  P       ++       T  +   +I      +   +++      +++    
Sbjct: 23  GSVIAQQDPANDPNIIVNGEAIPDTTAMTAGPEIKGIITARSGDKMKVTTAEGASTVVFI 82

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK--KI 199
           +    +           K       +N          +   +LA +   +  DL     I
Sbjct: 83  NEATEIKGSGGLFGSSRKKLTAAALLNGLPVTVKTMQAGPALLASQISLKSNDLKTATMI 142

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +  +   A+              I    I       FD       P+    L       
Sbjct: 143 RNGTAQGFAEQTAATEALRGRMGDIDKYNIKSTTNVYFDTGKYNLSPQAKAELCNAATTA 202

Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                 +  + G+TD+         N  LS  RA S    L ++      R+   +G A 
Sbjct: 203 EGIDNALMLVVGYTDSV---GDDEYNQTLSEKRANSVINYLQQACRWKPYRMLTPTGMAK 259

Query: 318 HRLKIASDPMN--SANRRIDILVEDRQG 343
                ++D     + NRR+ + V   +G
Sbjct: 260 ADPLASNDTEEGKAQNRRVAVNVLVSKG 287


>gi|254461268|ref|ZP_05074684.1| flagellar motor protein [Rhodobacterales bacterium HTCC2083]
 gi|206677857|gb|EDZ42344.1| flagellar motor protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 760

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 19/265 (7%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
            +    +I     ++ +  +   T+Q +      N       +Q S           +  
Sbjct: 497 DDATQQAILLAAARDELVQEQERTSQAQLQTEALNQQVAALRAQLSSLQAILDEAKIQDD 556

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST---LSGLVADNI 211
               +  +L   +N           K + L    +KRL+  A  +      L    ++  
Sbjct: 557 ASQVQLQNLGSELNAALARVAADERKRRELEEAERKRLEVEALALQEQTKDLERYRSEFF 616

Query: 212 VKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVL--------AH 261
            +       + G+ I        +  +F    +   PE    + K+  +L          
Sbjct: 617 GRLRDVLGRQDGVRIEGDRFVFSSEVLFPPGRAALSPEGRGEVAKVASILLAVADDIPDG 676

Query: 262 STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
              +I + GHTD  P        DNW LS  RA S  + ++   G+   R+   +GF   
Sbjct: 677 IDWIIRVDGHTDNVPLSGLGEFADNWELSQARALSVVKYMVNFLGIQPTRL-AANGFGQF 735

Query: 319 RLKI--ASDPMNSANRRIDILVEDR 341
           +      SD   + NRRI++   ++
Sbjct: 736 QPVNLEDSDEARAQNRRIELKFTEK 760


>gi|312195438|ref|YP_004015499.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
 gi|311226774|gb|ADP79629.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
          Length = 440

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 76/287 (26%), Gaps = 21/287 (7%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +   F    +   + S             +          + T+ +              
Sbjct: 22  LALQFEFANQGTESISPADLGTDPLTHVIAFLVDLPRGTGYATQRTPQANPDIDGSGPDE 81

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            R          + Q+E           +   +    D    +            K+  +
Sbjct: 82  ARASATTEKDVAAGQTETVTLVFPAPPAEATSMLVLVDGFVPVEVPIQAQGSAALKDDPV 141

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                    +L   ++  +     D         + R           +  +F   SS  
Sbjct: 142 LHVPSSPPNELDPPVAPLVCATETDPAAATPAQTSFRL---------PSDVLFAFGSSTL 192

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            P     +  +   +  ++  ++I G+TD+        DN  LSL RA +  Q  + + +
Sbjct: 193 SPSAARAIDALAHQITATSGTVTIAGYTDSI---GTDADNQALSLARASAVRQA-IAATL 248

Query: 305 SEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDRQG 343
             D   K  GF        +            + NRR+++ V+   G
Sbjct: 249 GPDFTYKAVGFGETSPVAPNTHQDGSDNPDGRARNRRVELTVDAATG 295


>gi|78047693|ref|YP_363868.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78036123|emb|CAJ23814.1| OmpA family membrane protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 438

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            MF   S+    +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA 
Sbjct: 328 SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 387

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           S   VL  +G+ + R  + SG    +        P   + NRR++IL+
Sbjct: 388 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|327398898|ref|YP_004339767.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
 gi|327181527|gb|AEA33708.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
          Length = 310

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 8/180 (4%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
             +   +   +   P  S+  ++ +    R +     I       +   +VK +  +T +
Sbjct: 133 SEQNKDHFYISAQSPDKSEYIMVYVGEGYRGRPGKAAIGIVKLKQIETGLVKIINAKTMK 192

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
             I            FD + +   P +   +++I  +L  +    + + GHTD+      
Sbjct: 193 KEIETKGHVPIYGIYFDFNKATIKPSSEPTIKEIARLLKENPSLKLYVVGHTDSI---GD 249

Query: 281 ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N +LS  RA +    L+K   ++ +R+    G        ++        NRR++++
Sbjct: 250 LNYNMKLSKKRAKAVVDELVKKYNINPNRLKAF-GVGPLAPVASNKTEEGRSKNRRVELI 308


>gi|319953135|ref|YP_004164402.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421795|gb|ADV48904.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 683

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 91/274 (33%), Gaps = 19/274 (6%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSV---DLKIGSTNQKKQYQRLENNIFYLSNS 137
            G  + +N  +  + NK D S               + G       Y      +  ++N+
Sbjct: 410 DGFQEVKNVGKPVNSNKDDFSYIVSEKSQKGYFASNRAGGKGDDDIYSFERLTVEEVNNT 469

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +      +T D      +    +    + + E+        E +   K+     +  +
Sbjct: 470 AIAGVVTELVTGDVMPKALVVLLDENNIKLKEIESADDGSFVFEDLEGDKKYTIKTNRKE 529

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVVL 252
                   +   N  + V     +   LI + D     + +   F+   S    +    L
Sbjct: 530 YFEELKEVMTTLNDTEIVEVSLKKLKELIVVEDGIRKLKTDMIYFNFDKSFIREDASKEL 589

Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            K+ EV++   E+ I I  HTD+      +  N  LS  RA S+   ++  G+  DRI  
Sbjct: 590 NKLVEVMSEYPEMVIKIESHTDSR---GASDYNRYLSDKRAKSSRDYIISQGIDADRIES 646

Query: 312 ISGFAHHRLKIASD-------PMNSANRRIDILV 338
             G+   RL    D         +  NRR + ++
Sbjct: 647 AIGYGEDRLLNDCDGSVKCTREKHELNRRSEFII 680


>gi|149913423|ref|ZP_01901956.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
 gi|149812543|gb|EDM72372.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
          Length = 638

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  SS        ++  I E+L    ++   I GHTD+         N RLS +RA + 
Sbjct: 499 FEPGSSTIDGNGAAIMDDIAEILRECGDIRIEIGGHTDSQ---GREEMNERLSQERAQAV 555

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L    V     +   G+   +    +D       NRRI+  +   Q
Sbjct: 556 LNELRARRVLTSSFTA-KGYGESQPIADNDTEEGREANRRIEFRLLRPQ 603


>gi|326796261|ref|YP_004314081.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326547025|gb|ADZ92245.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 213

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 8/156 (5%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +RL+D  K           D  +K ++         +  +       F+       P+  
Sbjct: 34  ERLKDQDKDGVIDARDTCPDTPLKSLIDNNGCPSHTVKTLSSELDVHFETGKYNLKPKYY 93

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
             L ++G+ L  +   I  I GHTD          N  LS  RA S  + L +   +  +
Sbjct: 94  PGLVELGKFLQKNPNTIAIITGHTDDI---GDEESNEILSQRRAQSIAKALSEKFKIDIE 150

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RI  + G+   R    ++       NRR+   V  +
Sbjct: 151 RIVAL-GYGESRPMYPNETDVERRKNRRVQASVVSK 185


>gi|308449675|ref|XP_003088039.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
 gi|308250191|gb|EFO94143.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
          Length = 216

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +    L       GV       G +  I+    +  FD + S   P     L K+ +
Sbjct: 76  YLDNKEKKLRQQMQGTGVEVNRNPDGSVALIM--PGSITFDTNKSTIKPNFYGTLNKVAQ 133

Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +  VI + G+TD +        N  LS +RAYS    L   GV   RI    G+ 
Sbjct: 134 TLMEDNKSVILVTGYTDNT---GNDSINIPLSQNRAYSVANYLKGKGV-ASRIDT-QGYG 188

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
                  +        NRR++I +
Sbjct: 189 SQNPIADNSTAAGREQNRRVEISI 212


>gi|149925997|ref|ZP_01914260.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
 gi|149825285|gb|EDM84496.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
          Length = 454

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 19/245 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
             +   T  S+      +      +R+     +L  S  S                    
Sbjct: 226 QPNSTNTPTSLHPDFWQSKAPGNNRRMRQIPLWLPISALSTLGALFFIGLYFNLNTQSDH 285

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
              E    +  +        E +   +  +    L ++I + L  L        V+    
Sbjct: 286 AFAEIVSIQFPSPQFAQTQSEPVPVTQGPELPIQLREEIVAGLLTLKQIGNKSTVILT-- 343

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN- 279
                          +F+  S+      I +++K+   LA     I++ G+TD  P R+ 
Sbjct: 344 ------------GDGLFNSGSAELNDSAIPLVEKVARKLALHPGQITVTGYTDNQPIRSI 391

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
               NW+LS +RA    Q +       +      G         +D     + NRR++I+
Sbjct: 392 RFPSNWQLSAERAEHVGQRIAT--FLPNTAIATEGAGAANPIAPNDSAQGRARNRRVEIM 449

Query: 338 VEDRQ 342
           +   Q
Sbjct: 450 LTHNQ 454


>gi|66044664|ref|YP_234505.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|289674679|ref|ZP_06495569.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           syringae FF5]
 gi|302187150|ref|ZP_07263823.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           syringae 642]
 gi|63255371|gb|AAY36467.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|330896136|gb|EGH28357.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330936710|gb|EGH40898.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330959272|gb|EGH59532.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330968884|gb|EGH68950.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 167

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 68  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165


>gi|317153134|ref|YP_004121182.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943385|gb|ADU62436.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 183

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     E   +L     ++   T+  + + GH D          N  L   RA +A
Sbjct: 82  FAFDSYELNSEARSILALKANIMRRYTDVRVVVEGHCDER---GTEEYNLALGERRARAA 138

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           Y+ L+  GV   R+S +S F   +   +  ++   + NRR + +V 
Sbjct: 139 YEHLVILGVDPGRMSIVS-FGEEKPLDSAHNETAWAKNRRAEFVVR 183


>gi|78061292|ref|YP_371200.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77969177|gb|ABB10556.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 220

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L ++    A  T   +S+ G TD+         N  LS  R
Sbjct: 114 GDALFATDHATLAPTARESLDRLLSERADHTYSQVSVTGFTDSV---GSDDYNLALSKRR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A S    L   G+  D +  ++G        ++        NRR++I ++
Sbjct: 171 AESVATYLKAHGLKTDSL-TVTGRGKADPVASNATPEGRASNRRVEIRLQ 219


>gi|115359322|ref|YP_776460.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115284610|gb|ABI90126.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 224

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       T   +++ GHTD+         N  LS  R
Sbjct: 118 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSV---GNDAANLALSKRR 174

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L   G++  +   +SG        ++        NRR+DI ++ 
Sbjct: 175 AETVAGYLKAHGLNA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 224


>gi|330831642|ref|YP_004394594.1| outer membrane lipoprotein [Aeromonas veronii B565]
 gi|328806778|gb|AEB51977.1| Outer membrane lipoprotein [Aeromonas veronii B565]
          Length = 218

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        +++++    N   FD SSS         L  +  
Sbjct: 78  YMDVQEAKLREKLQGTGVSVTRNGNELILNM---PNNVTFDSSSSQLKAAGANTLSGVAM 134

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V+A      +++ GHTD++        N +LS DRA +    L+  GV+  RIS  +G  
Sbjct: 135 VVAEFDKTRLNVVGHTDST---GSRDLNMKLSRDRADAVAAQLIGQGVAGSRIST-TGVG 190

Query: 317 HHRLKIASDPMN--SANRRIDILVE 339
             +    +      + NRR+ I + 
Sbjct: 191 PDQPVATNSTAAGKAQNRRVTITLT 215


>gi|46578465|ref|YP_009273.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603951|ref|YP_968351.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46447876|gb|AAS94532.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
 gi|120564180|gb|ABM29924.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311232393|gb|ADP85247.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 246

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 9/187 (4%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           +         ++   + +  L  L  +          ++ L         G+ A  + + 
Sbjct: 58  RQPGDLAGTPEAPRTDVSKRLRDLLMDAEALSANAVEIRSLLFPPQVLPPGVEARTVERD 117

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           V       G++I++       +F +      P ++ +L  + +VLA     +++  HTDA
Sbjct: 118 VEVLENPEGVVIALTHDL---LFPQGQDRLPPASLRLLDTLTDVLAGLDADVNVSAHTDA 174

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332
           +       D W LS  RA S  +  ++ G+   R   +SG+   R   AS    +   NR
Sbjct: 175 TEGG---ADPWDLSDRRALSVLEHFLQRGMDPARF-SVSGYGPDRPLDASASPEAAQRNR 230

Query: 333 RIDILVE 339
           R++ILV+
Sbjct: 231 RVEILVK 237



 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
          +K             W + Y+D +T+L+AFF+++  +++ D    + +       G    
Sbjct: 6  RKTRRKPHQHIPQQGWMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLRQPGDLAG 65

Query: 78 TASKGIFDEQ 87
          T      D  
Sbjct: 66 TPEAPRTDVS 75


>gi|209516113|ref|ZP_03264972.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209503397|gb|EEA03394.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 228

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 9/152 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L   + ++          QD  K++S+ L  L    +   +       G+ I I  + 
Sbjct: 64  QTLETKTVQQSAPAPAGGAQQDARKQLSALLDALREKGL---ITVTDVPHGVEIGINAK- 119

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
              +F+   +  LP++  VL +I +VL   ST  + + GHTD+ P        NW LS  
Sbjct: 120 --ILFNAGDARLLPDSFEVLNQIAQVLQKDSTGNVLVEGHTDSVPISTAKYASNWELSSA 177

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           RA +  + L++ G+   R++ I G A +   +
Sbjct: 178 RAGAVVRYLVERGIEPHRLAAI-GRADNFPLV 208



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
           W I YAD +T +M  FL ++++        +   Q            +     +Q+
Sbjct: 29 RWLISYADLITTMMVLFLALYVLQLAKSKQLELRYQTLETKTVQQSAPAPAGGAQQD 85


>gi|77462452|ref|YP_351956.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
           2.4.1]
 gi|221638315|ref|YP_002524577.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|332560336|ref|ZP_08414658.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
 gi|77386870|gb|ABA78055.1| outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
           2.4.1]
 gi|221159096|gb|ACM00076.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
 gi|332278048|gb|EGJ23363.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
          Length = 213

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   PE    L++  + +    E    + GHTD          N RL L RA + 
Sbjct: 69  FPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTD---LVGSEAYNKRLGLRRAKAV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  +   R  I        NRR
Sbjct: 126 VAYLASQGISPARLEALVSYGETRPVIPVAAPEERNRR 163


>gi|127511566|ref|YP_001092763.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126636861|gb|ABO22504.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 481

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 8/145 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +      +    +  E  +  I        +  +F   S   LPE   V+  +   L 
Sbjct: 339 KVVEETKLVDDRVVIDLEGLKDKIAQQGHVALDGLLFKFDSDQMLPEADEVITTLATYLK 398

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318
               +   + GHTD    +     N  LS  RA +    L    G+++ ++    G   +
Sbjct: 399 SHPKQHFYVVGHTDDQGKQG---YNKGLSEQRAKAVVATLTQSHGINKAQL-SPMGVGEY 454

Query: 319 RLKIAS--DPMNSANRRIDILVEDR 341
                +  +     NRR+++++   
Sbjct: 455 VPVANNLDEAGRQRNRRVELVLRSD 479


>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 352

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     E    L+ I + L +     + + GHTD+         N +LS +RA + 
Sbjct: 238 FAFDSDKLTAEDEARLEPIAQRLVNFPNAELVVIGHTDSR---GSEAYNQKLSEERAKTV 294

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              LMK   +   R+    G        ++D     + NRR+D+ 
Sbjct: 295 ALYLMKHFNIDASRVK-GEGRGELDPVASNDTAEGRAQNRRVDVT 338


>gi|327481279|gb|AEA84589.1| ompA family protein [Pseudomonas stutzeri DSM 4166]
          Length = 265

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 82/253 (32%), Gaps = 21/253 (8%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
              +    + ++   +   +  + +  +   +        +     +             
Sbjct: 15  AGCSSQDTEHELAQASAALERIQADGMVQRGAPKDLQRALETLQRAERFNDYWGGAEDAR 74

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA----------DNIVK 213
             +        +     E +   ++  RL+    ++   L               ++ + 
Sbjct: 75  HYAYLSRRYSEIAAQQGELLQHQEQVARLEMERDRLRRMLQDAQLMTAEQQGRWLEDQMM 134

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            +    T  G+++++ D     +F   S+         L K+   L  + +    I G++
Sbjct: 135 SLAASETDRGLVMTLGD----VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYS 190

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D+       + N  LS  RA +   +L+  G+  +R+ ++ G+        +      + 
Sbjct: 191 DSR---GDPQANLELSRARAQTVADLLISLGIEAERV-EVRGYGERFPIAENASARGRAQ 246

Query: 331 NRRIDILVEDRQG 343
           NRR++IL  D  G
Sbjct: 247 NRRVEILFSDAAG 259


>gi|262407869|ref|ZP_06084417.1| outer membrane protein [Bacteroides sp. 2_1_22]
 gi|294646781|ref|ZP_06724404.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|262354677|gb|EEZ03769.1| outer membrane protein [Bacteroides sp. 2_1_22]
 gi|292637941|gb|EFF56336.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
          Length = 255

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 91  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 149

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 150 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 209

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 210 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 244


>gi|326404482|ref|YP_004284564.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
 gi|325051344|dbj|BAJ81682.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
          Length = 456

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L  +     V    T    +I I    NT +F   S+      + ++ KIG
Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRIN---NTGLFASGSATVESTALPLISKIG 366

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + LA     + + G+TD+ P       +N  LS DRA +A  VL ++   + RI+   G 
Sbjct: 367 QALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITA-EGR 425

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   +      + NRRI+I++   +
Sbjct: 426 GAADPIATNATPQGRALNRRIEIVLIRSE 454


>gi|322509420|gb|ADX04874.1| Outer membrane protein [Acinetobacter baumannii 1656-2]
 gi|323519441|gb|ADX93822.1| putative lipoprotein precursor [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 154

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + +         L ++   L       + I GHTD          N +LS +
Sbjct: 47  PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 103

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I++
Sbjct: 104 RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 152


>gi|194434867|ref|ZP_03067114.1| OmpA domain protein [Shigella dysenteriae 1012]
 gi|194416886|gb|EDX33008.1| OmpA domain protein [Shigella dysenteriae 1012]
 gi|332089116|gb|EGI94226.1| ompA family protein [Shigella dysenteriae 155-74]
          Length = 550

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + + + +   +           V        + +      +  +FD   +     +  VL
Sbjct: 399 EHIRQPVLRAIHDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                 +      +  + G+TDA+      + N +LSL RA +    ++++         
Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           + G    +    +D     + NRR+ I +  R
Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVKISLVPR 542


>gi|169794682|ref|YP_001712475.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
 gi|213157946|ref|YP_002320744.1| OmpA/MotB [Acinetobacter baumannii AB0057]
 gi|215482270|ref|YP_002324452.1| Outer membrane protein A precursor [Acinetobacter baumannii
           AB307-0294]
 gi|239504137|ref|ZP_04663447.1| Outer membrane protein A precursor [Acinetobacter baumannii AB900]
 gi|260554079|ref|ZP_05826342.1| outer membrane protein A [Acinetobacter sp. RUH2624]
 gi|260558111|ref|ZP_05830321.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
           19606]
 gi|301345841|ref|ZP_07226582.1| Outer membrane protein A precursor [Acinetobacter baumannii AB056]
 gi|301512157|ref|ZP_07237394.1| Outer membrane protein A precursor [Acinetobacter baumannii AB058]
 gi|301597153|ref|ZP_07242161.1| Outer membrane protein A precursor [Acinetobacter baumannii AB059]
 gi|332851565|ref|ZP_08433542.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332867764|ref|ZP_08437836.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332873499|ref|ZP_08441450.1| OmpA family protein [Acinetobacter baumannii 6014059]
 gi|169147609|emb|CAM85470.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
 gi|193078408|gb|ABO13390.2| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
 gi|213057106|gb|ACJ42008.1| OmpA/MotB [Acinetobacter baumannii AB0057]
 gi|213987976|gb|ACJ58275.1| Outer membrane protein A precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260404818|gb|EEW98325.1| outer membrane protein A [Acinetobacter sp. RUH2624]
 gi|260408384|gb|EEX01692.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
           19606]
 gi|332729910|gb|EGJ61242.1| OmpA family protein [Acinetobacter baumannii 6013150]
 gi|332733770|gb|EGJ64922.1| OmpA family protein [Acinetobacter baumannii 6013113]
 gi|332738324|gb|EGJ69200.1| OmpA family protein [Acinetobacter baumannii 6014059]
          Length = 159

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + +         L ++   L       + I GHTD          N +LS +
Sbjct: 52  PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I++
Sbjct: 109 RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 157


>gi|126643008|ref|YP_001085992.1| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
 gi|184159508|ref|YP_001847847.1| outer membrane protein [Acinetobacter baumannii ACICU]
 gi|183211102|gb|ACC58500.1| Outer membrane protein [Acinetobacter baumannii ACICU]
          Length = 126

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + +         L ++   L       + I GHTD          N +LS +
Sbjct: 19  PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 75

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I++
Sbjct: 76  RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 124


>gi|153006367|ref|YP_001380692.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029940|gb|ABS27708.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 307

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 12/216 (5%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                +  +     +     +                 E    L    +      ++++ 
Sbjct: 55  ARGEAASATRGLHEARAALDDARTQRADLATRLGQAEVERRDLLAVKDELSQDVQQKEQE 114

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           +  L  +       + A+     V     +  I + ++D+    +FD   S    +   V
Sbjct: 115 IAALRGEFDELQEKMKAEIEKGNVRLSQEKGRIKVDMVDE---ILFDVGDSSISAQGAEV 171

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKS-GVS 305
           L ++G VLA  ++  I + GHTD  P           NW LS  RA +  + L +  GV 
Sbjct: 172 LSRVGAVLARMSDKHIQVSGHTDDLPISKRLVERFPTNWELSAARAITVVRFLEERAGVP 231

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             R+   +  + +            + NRRI+IL+ 
Sbjct: 232 GRRLVGAA-HSQYDPISTGKTAKERARNRRIEILLT 266


>gi|256422968|ref|YP_003123621.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256037876|gb|ACU61420.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 499

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +SS         L  + + +    +  + + GHTD       +  N  LS+ RA +
Sbjct: 393 LFKFNSSELNKNLYSSLDSLIKRIPRDGSIQLQVNGHTDN---AGTSAYNNSLSMKRANA 449

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
               + + G+  D I  I+G    +    +        NRR++I++
Sbjct: 450 VAGYMQEHGLGND-IRLITGVGESQPVADNQSAAGRRRNRRVEIII 494



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 36/105 (34%), Gaps = 6/105 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F    +         + +       +   I + G+      +     N  +S D+A + 
Sbjct: 265 LFTVDKNSLNDRYKQQIDEALNRYKGNRARIQLIGYA---WQKASEEYNRIISADKAKAV 321

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
              L+   G S D   ++ G    + +  +       N R+++++
Sbjct: 322 ANYLVYNEGYSFDDF-EVQGAGKTKPRYDTAGNTAGENNRVEMII 365


>gi|187923217|ref|YP_001894859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187714411|gb|ACD15635.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 168

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
             T +FD + S    +   V+ +   +L  S + I + G+TD          N  LS  R
Sbjct: 52  PETALFDFNKSEVRSDAAAVIDRSAVLLKRSKKPIVVEGYTDNV---GTLEYNQHLSEAR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +A   L+  G++ DRI +  G A++    ++D     + NRR +I+V  
Sbjct: 109 ASAAGYALVARGIAMDRI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158


>gi|84391232|ref|ZP_00991563.1| outer membrane protein [Vibrio splendidus 12B01]
 gi|84376521|gb|EAP93399.1| outer membrane protein [Vibrio splendidus 12B01]
          Length = 222

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +     +     +       +  I A         
Sbjct: 18  QATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDRRKRALIGAAGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L  ++   N   F   S          L+ 
Sbjct: 78  IGYYFDQQEAALREELMNSGVQVERVGENQL--LLRLENGIGFGSGSYALESSIHNTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  GHTD++        N  LS  RA S    L+   V+  R     
Sbjct: 136 VARILVEYPDTSLVIDGHTDST---GSESSNQILSERRAESVRAFLISQDVAAGRAIA-R 191

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339
           G         ++     + NRR++I + 
Sbjct: 192 GNGERYPLCDNNTSQGRACNRRVEIQIL 219


>gi|326797243|ref|YP_004315063.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326548007|gb|ADZ93227.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 201

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 8/164 (4%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P ++        +  +L D  K     +    A+      +       +   ++     
Sbjct: 19  TPSMAGSVYGDRIKASQLADNDKDGVINVRDRCANTPRGAKVDNYGCPTVNKRLLSVELN 78

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
            +FD    +  P     ++K+ + +  +     +  GHTD       A  N  LS +RA 
Sbjct: 79  ILFDSGKYVVKPRFYGEVKKLADFMKSNAGSSVVIEGHTDDV---GAADYNEALSQNRAD 135

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
           +   VL+ S  +   R+  I G+   +    ++     + NRR+
Sbjct: 136 AIADVLINSFKIDRKRVEAI-GYGESKPIADNETIDGRATNRRV 178


>gi|149372847|ref|ZP_01891868.1| OmpA family protein [unidentified eubacterium SCB49]
 gi|149354544|gb|EDM43109.1| OmpA family protein [unidentified eubacterium SCB49]
          Length = 235

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 9/143 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                ++ + G   E    GI+I+  D+ +   FD +       +   L K+  VL    
Sbjct: 86  QAQEIESEIPGAEVERVDDGIVITF-DENSGVYFDTAKYNINTASQQNLDKLAGVLQEYV 144

Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321
           +    + GHTD+         N  LS  RA +         G+S  R +  + +      
Sbjct: 145 DTNVLVVGHTDSV---GSEDSNMLLSQRRAQAVTNYFTSTKGLSSSRFTT-NWYGEQTPV 200

Query: 322 IASDP--MNSANRRIDILVEDRQ 342
             +      + NRR++I++   +
Sbjct: 201 GDNATPEGRAQNRRVNIVIVPNE 223


>gi|85374727|ref|YP_458789.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
 gi|84787810|gb|ABC63992.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
          Length = 170

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 8/117 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           +  ++ +N   FD             LQ   + L+      ++I GH D          N
Sbjct: 57  VRAVNGQNIIYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHADER---GTRDYN 113

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR-IDILV 338
             L   RA +A   L+  G+   RIS +S +   R    +      + NRR + +++
Sbjct: 114 LALGERRANAAKNYLVSLGIPATRISTVS-YGEERPVATASTPEAWAQNRRAVTVVI 169


>gi|116748592|ref|YP_845279.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697656|gb|ABK16844.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 182

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 13/158 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSSSI 243
           +  +D  K ++ T  G +     + V   T   G  I     +         +F   S+ 
Sbjct: 26  ESSKDANKSLAPTAGGYIERQEAELVQRMTRADGTSIQREQDKLCITFNCGVLFPDDSTE 85

Query: 244 PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+    +  + EVLA      I + G TD +      + +  ++  RA +   VL+  
Sbjct: 86  LKPDAPARIAPVAEVLAKYPATSIKVDGFTDRT---GSEKYDHEITESRATAVRDVLVGK 142

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           G+   RI +  GF   +    +        NRR+ I +
Sbjct: 143 GIDPARI-RARGFGDSKPLTTNATDEGRRTNRRVTITI 179


>gi|87121178|ref|ZP_01077069.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
 gi|86163670|gb|EAQ64944.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
          Length = 200

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 10/113 (8%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F+  S+    +    ++K+ + +  +     +  GHTD          N  LS  RA 
Sbjct: 77  VFFETDSTEIRFQYYKEIKKLADFMKDNPSSKVVIEGHTDN---SGRQSYNQSLSYKRAQ 133

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DILVEDR 341
           +   +L++S  +S  R+  I G++  R   ++        NRR+  +I ++ +
Sbjct: 134 AIADILIQSFKISAKRVKAI-GYSESRPIASNASAEGKKKNRRVVAEISIQTK 185


>gi|166712215|ref|ZP_02243422.1| hypothetical protein Xoryp_12360 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 438

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            MF   S+    +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA 
Sbjct: 328 SMFPSGSAELDADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAE 387

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           S   VL  +G+ + R  + SG    +        P   + NRR++IL+
Sbjct: 388 SVGAVL-AAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|163786090|ref|ZP_02180538.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
 gi|159877950|gb|EDP72006.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
          Length = 627

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               FD +     P+    L  +  +L     + I +  HTD+         N  LS  R
Sbjct: 518 ENIYFDFAKWDIKPQAARTLDILVALLKKYPRMEIQLGAHTDSR---AGFEFNMDLSHKR 574

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340
           A +  + L+++G+S  R++   G+   +  +      ++   S NRR + L+  
Sbjct: 575 AKATLEYLVENGISRARLTS-KGYGETQPLVPCGDNCTETEFSINRRCEFLILK 627


>gi|330820746|ref|YP_004349608.1| putative outer membrane protein A precursor [Burkholderia gladioli
           BSR3]
 gi|327372741|gb|AEA64096.1| putative outer membrane protein A precursor [Burkholderia gladioli
           BSR3]
          Length = 222

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARD 283
           +I  ++     +F    +   P     L ++  E        +S+ G+TD+         
Sbjct: 108 VIEHVNLSGDVLFASDHATLAPSARESLDQLLSERTDRVYSEVSVTGYTDSV---GSDEY 164

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N  LS  RA S    L   G+    +  +SG        ++        NRR++I +
Sbjct: 165 NLDLSKRRAESVAAYLSAHGLKTGSMK-VSGRGKADPVASNMTAEGRASNRRVEITL 220


>gi|253999219|ref|YP_003051282.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
 gi|253985898|gb|ACT50755.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
          Length = 222

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   S   P    VL    + L A+    ++I GHTD +        N  LS
Sbjct: 104 DIPSDISFDSGKSDIKPNFRPVLDSFAQSLVANPATRVTIVGHTDNT---GTDAVNNPLS 160

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           L+RA  A   L+  GV+  R +   G   H   + ++     + NRR++I V + Q
Sbjct: 161 LNRANHARDYLVTRGVASSRFTT-EGRGSHEPLVENNSDANRAKNRRVEIFVAEPQ 215


>gi|253997300|ref|YP_003049364.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
 gi|253983979|gb|ACT48837.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
          Length = 217

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 7/117 (5%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD   +        VL      L  +    +++ GHTD +        N  LS
Sbjct: 104 DIPSDISFDVGRADIKANFRAVLDTFATSLVNNPASNVTVIGHTDNT---GSDAVNNPLS 160

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           ++RA S    ++  GV   RI  I G       +A+D     + NRR++I V +  G
Sbjct: 161 VNRAASVRDYVVARGVQHSRI-TIEGRGAREPLVANDTAANRAKNRRVEIFVAEPAG 216


>gi|50956519|gb|AAT90766.1| conserved hypothetical protein [uncultured proteobacterium QS1]
          Length = 372

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD  S+   P +  VL      +   +   I I GHTD +     A  N ++S  
Sbjct: 254 DSLSLFDAGSTELKPGSTKVLINALANIKAQSGWLIEIVGHTDTT---GNAEQNLQISYA 310

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +    + + G        + G A  +   ++D     +ANRR+DI +
Sbjct: 311 RASAVRDWMQRMGDIPSNCFVVQGAAGSQPITSNDTASGRAANRRVDIRL 360


>gi|114321676|ref|YP_743359.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228070|gb|ABI57869.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 216

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 15/120 (12%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSL 289
            +  +F   S    P     L+ + E +      + I + GHTD       A  N  LS 
Sbjct: 99  DSEALFGFDSDELTPGGRANLRNVIERINAMERVDSIRVNGHTDHI---GSAAYNQELSE 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSA------NRRIDILVED 340
            RA +    +++ GV ++ I+   G+   R       +   ++       NRR++I VE 
Sbjct: 156 RRAAAVRTFMVQQGVDDNLITS-RGYGEDRPVKECPDNLSGSALIECLAPNRRVEIHVEG 214


>gi|162454125|ref|YP_001616492.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161164707|emb|CAN96012.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 274

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSL 289
               +FD S +   P +   L+ + + +    E   + I GHTDA    +    N  LS 
Sbjct: 71  EGKIVFDTSKATIRPGSEKTLETLLQFIKEHPEVTRLRIEGHTDAQ---SSEEHNQALSA 127

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
            RA +    L+   V+ DR+  + GF   R    ++       NRR++  V +  G
Sbjct: 128 RRALAVADWLVDHEVASDRLIAV-GFGESRPLGPNEIAAGRSENRRVEFHVAEVNG 182


>gi|148926911|ref|ZP_01810589.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145844488|gb|EDK21596.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|284925406|gb|ADC27758.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 165

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            + D  N   FD       P+   V+     +         I++ G+ D          N
Sbjct: 52  QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L L RA +  + L+  GV+ DRI  +  +               + NRR +  +  
Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165


>gi|153952154|ref|YP_001397367.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. doylei 269.97]
 gi|152939600|gb|ABS44341.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 165

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            + D  N   FD       P+   V+     +         I++ G+ D          N
Sbjct: 52  QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L L RA +  + L+  GV+ DRI  +  +               + NRR +  +  
Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165


>gi|107027050|ref|YP_624561.1| hypothetical protein Bcen_4708 [Burkholderia cenocepacia AU 1054]
 gi|116691753|ref|YP_837286.1| hypothetical protein Bcen2424_3655 [Burkholderia cenocepacia
           HI2424]
 gi|170736247|ref|YP_001777507.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|254248991|ref|ZP_04942311.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
 gi|105896424|gb|ABF79588.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116649753|gb|ABK10393.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|124875492|gb|EAY65482.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
 gi|169818435|gb|ACA93017.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 214

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ ++      K +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARQLEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P    +L+     +   L    E++ I G  D            DNW LS 
Sbjct: 92  FALNSDQLQPAGRDLLKTLAGPLATYLKTRDEILMISGFADDQQVHAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + ++ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRAMIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199


>gi|57237120|ref|YP_178132.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           RM1221]
 gi|86149517|ref|ZP_01067747.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|86151400|ref|ZP_01069615.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|86153754|ref|ZP_01071957.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|88597159|ref|ZP_01100394.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|121612869|ref|YP_999837.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|157414426|ref|YP_001481682.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|167004808|ref|ZP_02270566.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|205356488|ref|ZP_03223252.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|218561794|ref|YP_002343573.1| peptidoglycan associated lipoprotein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|283955557|ref|ZP_06373052.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|315123715|ref|YP_004065719.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|1063274|emb|CAA58288.1| precursor of peptidoglycane associated lipoprotein [Campylobacter
           jejuni]
 gi|57165924|gb|AAW34703.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           RM1221]
 gi|85839785|gb|EAQ57044.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85841747|gb|EAQ58994.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|85842715|gb|EAQ59927.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87250340|gb|EAQ73298.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|88190220|gb|EAQ94194.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359500|emb|CAL34284.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|157385390|gb|ABV51705.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|205345675|gb|EDZ32314.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|283793018|gb|EFC31792.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|307747070|gb|ADN90340.1| Peptidoglycan associated lipoprotein (Omp18) [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315017437|gb|ADT65530.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315057553|gb|ADT71882.1| Outer membrane lipoprotein omp16 precursor [Campylobacter jejuni
           subsp. jejuni S3]
 gi|315926949|gb|EFV06311.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929959|gb|EFV09113.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
           jejuni 305]
 gi|315931507|gb|EFV10474.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 165

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            + D  N   FD       P+   V+     +         I++ G+ D          N
Sbjct: 52  QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L L RA +  + L+  GV+ DRI  +  +               + NRR +  +  
Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165


>gi|57168718|ref|ZP_00367850.1| omp18 [Campylobacter coli RM2228]
 gi|305432654|ref|ZP_07401815.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
           JV20]
 gi|1245150|gb|AAC35420.1| omp18 [Campylobacter coli]
 gi|4454089|emb|CAA10786.1| PAL protein, putative [Campylobacter jejuni]
 gi|57019999|gb|EAL56679.1| omp18 [Campylobacter coli RM2228]
 gi|304444365|gb|EFM37017.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
           JV20]
          Length = 165

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            + D      FD       P+   V+     +  +      I++ G+ D          N
Sbjct: 52  QLNDTLGKVYFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L L RA +  + L+  GV+ DRI  +  +               + NRR +  +  
Sbjct: 109 QALGLKRAKAVKEALIAQGVNSDRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165


>gi|330892247|gb|EGH24908.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 150

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 51  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 107

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 108 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 148


>gi|283955279|ref|ZP_06372779.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283793193|gb|EFC31962.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 165

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            + D  N   FD       P+   V+     +         I++ G+ D          N
Sbjct: 52  QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVNITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L L RA +  + L+  GV+ DRI  +  +               + NRR +  +  
Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165


>gi|149921395|ref|ZP_01909848.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149817715|gb|EDM77180.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 224

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 12/200 (6%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                     +E       +T  + +         P  +    L         D   +  
Sbjct: 25  ASDTEPTQSLAEAPGSTALATSEQPTDAPVLAQASPEAAPPSDLDQDGIPDTLDQCPEDP 84

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             + G   ++    +L       I I          F    S   P +  +L+ I  VL 
Sbjct: 85  EDVDGDADEDGCPDLLCRLDPCEIAI-----FEKVYFAYDESTIEPRSFPLLKDIAFVLG 139

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           +S +  I I GHTD+   +  +  N  LS  R  S  + L+  GV++ ++S + G+    
Sbjct: 140 YSPQVTIQIAGHTDS---KGRSEYNEGLSQRRVDSVREHLLSLGVNDQQLSSV-GYGEMT 195

Query: 320 LKIASDPMNSA--NRRIDIL 337
               +        NRR++ L
Sbjct: 196 PIDTNRTEAGRAHNRRVEFL 215


>gi|86740618|ref|YP_481018.1| OmpA/MotB [Frankia sp. CcI3]
 gi|86567480|gb|ABD11289.1| OmpA/MotB [Frankia sp. CcI3]
          Length = 363

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   ++   P   + L ++   L     V+ + GH DA      A  N  LSLDRA    
Sbjct: 260 FPVGAATLSPPARLWLDRVAAALRAGRVVVLVGGHADA---SGSATLNQALSLDRAQVIA 316

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             L   GV  D + +++GF        +      +ANRR++I+
Sbjct: 317 DYLTDRGVRPD-LIRVAGFGSRWPVADNATPRGRAANRRVEIV 358


>gi|302381938|ref|YP_003817761.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192566|gb|ADL00138.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 356

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIAR 282
             +++       FD   +   P+    L ++ E++  +  T  I+I GHTD+        
Sbjct: 219 RGTVVALSGDVTFDFDQATIRPDARPTLDRLAELIQATGGTGRIAIEGHTDSE---GTDA 275

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
            N  LS  RA +    L+  G S DR+  + G    R  +A+  D     NRR+++++
Sbjct: 276 YNHDLSERRAEAVKAYLVPRGTSGDRLEAM-GIGEARPAVANDDDAGRRRNRRVEVIL 332


>gi|293611455|ref|ZP_06693750.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826239|gb|EFF84609.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123511|gb|ADY83034.1| OmpA/MotB [Acinetobacter calcoaceticus PHEA-2]
          Length = 159

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD +++         L ++   L       + I GHTD       A  N +LS +
Sbjct: 52  PERLLFDFNNAQLKQSHEAELVRLANQLNKYDLNKLKIVGHTDDV---GDATYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA S   + +  G  ++ I  + G    +  + +      + NRR+ I+V
Sbjct: 109 RAQSVANLFLTRGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157


>gi|172064119|ref|YP_001811770.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171996636|gb|ACB67554.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 224

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+    A  T   +++ GHTD+         N  LS  R
Sbjct: 118 GDALFATGLATLTPAARASLDKLLSERADRTYTQVTVTGHTDSV---GNDAANLALSKRR 174

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L   G++  +   +SG        ++        NRR+DI ++ 
Sbjct: 175 AETVAGYLKAHGLNA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 224


>gi|325267796|ref|ZP_08134446.1| OmpA family protein [Kingella denitrificans ATCC 33394]
 gi|324980677|gb|EGC16339.1| OmpA family protein [Kingella denitrificans ATCC 33394]
          Length = 221

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 10/157 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A+        +   +      L       GV  E     I +++ +      F  +S+  
Sbjct: 62  ALACGAVGAGVGGYMDYQERKLREQLANTGVEVERKGNQIKLTMPENIT---FATNSAAL 118

Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +    L    E LA   E   ++ GHTD++        N  LS +RA +    L + G
Sbjct: 119 SAQAQNALATAAETLAKYNETTITVVGHTDST---GNDAINNPLSYNRANAVSSFLAQHG 175

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           V+  R+  + G    +    ++     + NRR++IL+
Sbjct: 176 VATQRM-TVLGQGSRQPIADNNTEAGRAQNRRVEILI 211


>gi|261416894|ref|YP_003250577.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373350|gb|ACX76095.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326780|gb|ADL25981.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 774

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNW 285
           ++     F   S+        +L+ I + L            I+GHTD       A+ N 
Sbjct: 647 EKLEGISFKSGSATVNANAKRILKGIAQKLKEDEAYKDLKIVIQGHTDNR---GKAKKNL 703

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           +LS  RA +  + L K GV+++RI  + G         +   +    NRRI+
Sbjct: 704 KLSDRRAKAVMKQLTKFGVAKNRIKAV-GLGSTCPVDDNSTADGREMNRRIE 754


>gi|170725705|ref|YP_001759731.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169811052|gb|ACA85636.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 190

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ + +  +     V  +I   L      + + GHTD+         N  LS  RA +  
Sbjct: 88  FEFAQAEVMFAQWQVFTRIKRFLQEHDVKLCLLGHTDSV---GAEAGNMALSHLRALNVK 144

Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           ++L+   G + DR  ++ G A      ++D     + NRR+++ VE
Sbjct: 145 RILVDDLGFNPDRF-QVKGMADTHPVASNDFPEGRAMNRRVELFVE 189


>gi|165940436|ref|ZP_02228930.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165911633|gb|EDR30316.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
          Length = 307

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 172 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 228

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 229 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 278


>gi|93005138|ref|YP_579575.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92392816|gb|ABE74091.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 533

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 7/175 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +N  +   L  L  +   A      + +      + ++  +  +               +
Sbjct: 312 VNAADTAALTKLVSDLQAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDV 371

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           +         F+   ++       +L +  +++     +   I GHTD +     A  N 
Sbjct: 372 ARALSLQVVNFEVDKAVIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKT---ADAAYNL 428

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +LS +RA +    L+  GV   ++    G         +        NRRI+ +V
Sbjct: 429 KLSEERAQAMKAYLVAQGVDPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482


>gi|146276360|ref|YP_001166519.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554601|gb|ABP69214.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 212

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   PE   VL++    +    E    + GHTD       A  N  L L RA + 
Sbjct: 68  FPFDSARLTPEAQRVLREQANWIRQFPEVRFRVYGHTD---LVGSASYNKSLGLRRAKAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
                  G+S  R+  +  +   R  I        NRR
Sbjct: 125 VAFFASQGISPSRLEALVSYGETRPVIPVATPEERNRR 162


>gi|237800227|ref|ZP_04588688.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806415|ref|ZP_04593119.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023084|gb|EGI03141.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027528|gb|EGI07583.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 167

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 68  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165


>gi|146299407|ref|YP_001193998.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146153825|gb|ABQ04679.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 666

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 78/240 (32%), Gaps = 14/240 (5%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                G+   ++  + L N    L +       +     +        K          +
Sbjct: 430 EQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCGKKYYIKTAK 489

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E+Y    +S     A         L KK     +  V       +        +   +  
Sbjct: 490 EDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVTIAVGTDLGK 549

Query: 231 QRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
               PM  FD   +     ++  LQK+ ++L     +   IR HTD+    + +  N  L
Sbjct: 550 LLKIPMNFFDLGKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSR---SSSESNQIL 606

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           S  RA S    L+  G++ DR++   GF   +L          ++  +  NRR + ++  
Sbjct: 607 SDKRAQSTKDWLVSKGINADRLTA-KGFGETQLVNKCADGVKCTEQQHQQNRRSEFIIVS 665


>gi|253991307|ref|YP_003042663.1| hypothetical protein PAU_03834 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782757|emb|CAQ85922.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 577

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S     +  VL      +      + +  GHTD++        N  LSL 
Sbjct: 437 NSMSLFDVGQSRLKAGSAKVLMNALIDIKAKPGWLIVISGHTDST---GNTEKNRVLSLA 493

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +    L+++         + G    R    +      +ANRR++I +
Sbjct: 494 RAEAVRDWLLQTSDIPLACFAVQGEGATRPVATNSTAAGRAANRRVEIRL 543


>gi|237799776|ref|ZP_04588237.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022631|gb|EGI02688.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 229

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQTHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|224023377|ref|ZP_03641743.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
           18228]
 gi|224016599|gb|EEF74611.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
           18228]
          Length = 239

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+             +            + +       +F  SS+         L K  
Sbjct: 74  KKMDKAAQQAQQIEGAEVEQVTDNNGLQAVKVTFDSG-ILFTTSSATLSSAAKASLSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    ++I G+TD   +RN  ++     N  LS +RA S    L+  GVS  +I
Sbjct: 133 NNVLNQNRDMDVAIYGYTDNQGWRNSTKEQSVQKNLNLSQERAQSVSSYLLGCGVSASQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G         +        NRR+++ +   Q
Sbjct: 193 KSVEGMGESNPVADNSTEAGRQENRRVEVYMYASQ 227


>gi|163789308|ref|ZP_02183749.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
 gi|159875376|gb|EDP69439.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
          Length = 680

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 226 ISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278
           I   D     +      FD   S    +  + +QK+  VL       I IR HTD     
Sbjct: 541 IEPCDDLAKILDIPIIYFDFDKSNIRYDAEIEIQKVLAVLNKYPTMHIDIRSHTDCR--- 597

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDP-----M 327
             A  N +LS  RA S  Q L+  G++ +R++   G+   RL         ++       
Sbjct: 598 GPASYNEKLSDRRAKSTRQYLIDKGIAAERLTA-KGYGESRLVNDCGCEPTNESSCSQEE 656

Query: 328 NSANRRIDILVEDRQG 343
           +  NRR + ++    G
Sbjct: 657 HQLNRRSEFIITSING 672


>gi|148261080|ref|YP_001235207.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146402761|gb|ABQ31288.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
          Length = 456

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +      L  +     V    T    +I I    NT +F   S+      + ++ KIG
Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRIN---NTGLFASGSATVESTALPLISKIG 366

Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + LA     + + G+TD+ P       +N  LS DRA +A  VL ++   + RI+   G 
Sbjct: 367 QALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITA-EGR 425

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   +      + NRRI+I++   +
Sbjct: 426 GAADPIATNATPQGRALNRRIEIVLIRSE 454


>gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
          Length = 319

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD + S   PE   V+ +  +      T  + + GH D        + N  LSL
Sbjct: 212 KNFIVFFDFNKSDITPEASKVITQAVDTAKKGKTTRVDLTGHADR---SGPDKYNMALSL 268

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
            RA +    ++K G+  D+I  + G       +          NRR++I++
Sbjct: 269 KRANAVKAAMVKQGIPADQI-SVVGKGEAVPLVQTPDGVREPQNRRVEIVL 318


>gi|332186728|ref|ZP_08388471.1| type IV / VI secretion system , DotU family domain protein
           [Sphingomonas sp. S17]
 gi|332013380|gb|EGI55442.1| type IV / VI secretion system , DotU family domain protein
           [Sphingomonas sp. S17]
          Length = 475

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYS 294
           +F   S    P    +  +IG  +      + I GH D +P       DN  LS  RA +
Sbjct: 367 LFRSGSDELEPGREPLFHRIGRAIEDEKGGVVIEGHADNTPVATVRFPDNMALSEARAET 426

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             +++        R++   G        ++        NRR++I+V  R
Sbjct: 427 VAKLIRSDLSDPSRVTT-KGLGDTVPIASNADAAGKSQNRRVEIVVPRR 474


>gi|170691850|ref|ZP_02883014.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170143134|gb|EDT11298.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 168

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               +FD   S    +   V+ +   +L  S + I + G+TD          N +LS  R
Sbjct: 52  PEKALFDFDKSAVRADASAVVDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L+  GV  +R+ +  G A++    ++D     + NRR +I+V  
Sbjct: 109 AVAVGYALVGRGVPMERV-RTKGNAYNNPIASNDTPEGRALNRRTEIVVRG 158


>gi|156974345|ref|YP_001445252.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
 gi|156525939|gb|ABU71025.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
          Length = 219

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     L  +           +          I A         
Sbjct: 15  QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 74

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L    +  GV  E      L  ++   N   F  SS          L+ 
Sbjct: 75  VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDSSIHNTLRG 132

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  G+TD++        N  LS  RA S  Q L+   V+  R     
Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQKVAPGRAIA-R 188

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339
           G+       ++      + NRR++I + 
Sbjct: 189 GYGERNPICSNQTSDGRACNRRVEIQIL 216


>gi|146282939|ref|YP_001173092.1| ompA family protein [Pseudomonas stutzeri A1501]
 gi|145571144|gb|ABP80250.1| ompA family protein [Pseudomonas stutzeri A1501]
          Length = 263

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 97/249 (38%), Gaps = 14/249 (5%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN--SLTRDSEKGKDL 157
              +  + + S  L+    +   Q    ++    L   Q++E   +      D+     L
Sbjct: 18  QDTEHELAQASAALERIQADGMVQRGAPKDLQRALETLQRAERFNDYWGGAEDARHYAYL 77

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +      +   E       +++ ++   + ++ LQD A+ +++   G   ++ +  +  
Sbjct: 78  SRRYSEIAARQGELLQHQEQVARLEMERDRLRRMLQD-AQLMTAEQQGRWLEDQMMSLAA 136

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
             T  G+++++ D     +F   S+         L K+   L  + +    I G++D+  
Sbjct: 137 SETDRGLVMTLGD----VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSR- 191

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
                + N  LS  RA +   +L+  G+  +R+ ++ G+        +      + NRR+
Sbjct: 192 --GDPQANLELSRARAQTVADLLISLGIEAERV-EVRGYGERFPIAENASARGRAQNRRV 248

Query: 335 DILVEDRQG 343
           +IL  D  G
Sbjct: 249 EILFSDAAG 257


>gi|78189654|ref|YP_379992.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Chlorobium chlorochromatii CaD3]
 gi|78171853|gb|ABB28949.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Chlorobium chlorochromatii
           CaD3]
          Length = 211

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   S    + +  LQ +   +        +I  H D+   +     N  L   R
Sbjct: 106 GDILFDFDKSFIRKDAVPQLQDVAAWMKEHPTKNVTIEAHCDS---KGSEAYNIALGKRR 162

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           A +A   L+  G+  +R+  IS +   +  +    +   + NRR+  +VE
Sbjct: 163 ADAAKAYLVNKGIDSNRLKTIS-YGKDKPLMNGIDESARARNRRVHFVVE 211


>gi|330811386|ref|YP_004355848.1| OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379494|gb|AEA70844.1| Putative OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 165

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKSNGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163


>gi|254483240|ref|ZP_05096472.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
 gi|214036463|gb|EEB77138.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
          Length = 329

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 73/260 (28%), Gaps = 19/260 (7%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            D Q        +    +       +S  L+      K+    +       S      + 
Sbjct: 79  IDTQGTTSLMRPSDCSNAEAGSYFPSSGSLQASEPEGKETVFAIIAKAPLTSAETLLNNS 138

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
              +T D      L     +  + ++        L     LAM            I   +
Sbjct: 139 PGYVTLDETGTNQLLGDIRMAAASSQLALAETSYLVGNSQLAMSDPDLQYTTRGIIRKVV 198

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
               A+  +   + E +     I+         F+  S     + I  L + G  L    
Sbjct: 199 ESTEAEEGLNDAIGEVSFDVQSIN---------FEFGSDELAADGIRQLDEFGAALVSPE 249

Query: 264 EVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319
                  + GHTD          N  LS  RA +    L  +  V   R+ ++ G    +
Sbjct: 250 LEQLKLRVAGHTDDQ---GEESYNLDLSQRRAKAVALYLESNYEVDSGRL-EVVGMGEEK 305

Query: 320 LKIASDP--MNSANRRIDIL 337
             +        + NRR++++
Sbjct: 306 PLVPDASLEARAKNRRVEMV 325


>gi|66044258|ref|YP_234099.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63254965|gb|AAY36061.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|330945118|gb|EGH46848.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330969323|gb|EGH69389.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 229

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|256424721|ref|YP_003125374.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256039629|gb|ACU63173.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 677

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 14/201 (6%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D+E        +    +++ ++  F P L          +  +      +       V +
Sbjct: 480 DNEGNFHFALDSLTAYALDGQKPLFRPELGVAVTTNGLTESAVLHRDLYLEKIEVETVVN 539

Query: 210 NIVKGVLFETTRTGILISIID--QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266
              + V  +       I + +        FD   +   P+    L K+  ++  +     
Sbjct: 540 KPKEPVPAKGIGAPRKIELGNKFNPQNIYFDLGKADIRPDVAKELDKLIALMKENANWKV 599

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--- 323
            +  HTD+    +    N +LS  RA S     +  G+ + R++   G+   +L      
Sbjct: 600 DMSFHTDSR---SDDNYNMKLSQRRATSTLNYFLSKGIDKKRLTA-KGYGETKLINRCAN 655

Query: 324 ----SDPMNSANRRIDILVED 340
               ++  + ANRR +  V +
Sbjct: 656 GVNCTEEEHKANRRAEFTVLE 676


>gi|217979014|ref|YP_002363161.1| type VI secretion system OmpA/MotB family protein [Methylocella
           silvestris BL2]
 gi|217504390|gb|ACK51799.1| type VI secretion system OmpA/MotB family protein [Methylocella
           silvestris BL2]
          Length = 493

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 7/144 (4%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++    + L  +     +  + T   I+I IID+    +F    S  L +   ++  I  
Sbjct: 350 QLDHVRNVLAPNIQSGALSVDATANQIVIRIIDR---ALFQPGKSTMLDDVKPLMMYIAM 406

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L      + + GH+D +P  N     N+ LSL+RA     +L +S    +R+    G  
Sbjct: 407 ALDDDRGAVKVIGHSDNTPISNARFASNFELSLERANVVGALLKQSLSHPERVET-EGKG 465

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
                  +D     + NRR++I+V
Sbjct: 466 ADAPIAPNDTPEGRAKNRRVEIVV 489


>gi|113969260|ref|YP_733053.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113883944|gb|ABI37996.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 485

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  +      + GHTD    +     N  LS  RA +
Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQNPTLSFYVVGHTDD---KGERSYNQSLSERRAAA 434

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + L     +   +++   G   +    ++        NRR+++++   +
Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484


>gi|295700038|ref|YP_003607931.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295439251|gb|ADG18420.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 217

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 20/168 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           LS +    +K+++      K +   L+G +A            R  ++   I      +F
Sbjct: 44  LSNKLEHEVKQRQAETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVLF 93

Query: 238 DKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSLD 290
             +S+   PE   +L+     +   L  S +++ + G TD    R       DNW LS  
Sbjct: 94  ALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSAQ 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           RA +  + L+  G+    +   + F   +   ++  +   + NRR++I
Sbjct: 154 RALTVTRALIDEGLPASSVFAAA-FGSEQPVSSNADESGRAKNRRVEI 200


>gi|296157423|ref|ZP_06840258.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295892195|gb|EFG71978.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 584

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDR 291
           F  +S+      +  L +   VL             + G++D        + N +LS  R
Sbjct: 478 FASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNV---GGEQANLQLSKQR 534

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A +    L+K+GV  D +    G+   R   ++D  +    NRRI+ +
Sbjct: 535 AEAVRAYLVKTGVPADSLIA-QGYGGARPVASNDTASGRFANRRIEFV 581


>gi|90020235|ref|YP_526062.1| OmpA domain-containing protein [Saccharophagus degradans 2-40]
 gi|89949835|gb|ABD79850.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 381

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 15/272 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID--EHITKNSVDLKIGSTNQKKQYQR 126
           + P+  + +       D       +  N             +   D++            
Sbjct: 105 WKPYLVSGIGGRNVDVDGFGDSSSTFVNAGVGIKGLLAENFQVRGDVRALHDLDDSFNDV 164

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
             N         +++  K ++   +        S +   +   +     P   K      
Sbjct: 165 GVNVGLAYVFGGKAKASKPTVKPAATTPAKPMDSDNDGVANTLDACPATPANVKVDAKGC 224

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                   +A    S  +      +       +    + I++  Q     FD +S++   
Sbjct: 225 ALDSDNDGVADYQDSCANTAATHKVDAKGCSLSLTETVAINLSIQ-----FDNNSAVVKE 279

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
                ++++ + +       +S+ G+TD       A  N +LS  RA +    L+    +
Sbjct: 280 SYYAEVKRVADFMNQYANTQVSVEGYTDDR---GSAAYNKQLSQKRADAVKATLVSQFNI 336

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRI 334
              R++  +GF        +D     +ANRR+
Sbjct: 337 DAARVTA-TGFGEINPIDTNDTAAGRAANRRV 367


>gi|257125599|ref|YP_003163713.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257049538|gb|ACV38722.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 256

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 9/216 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             ++   N   + ++   E   ++   D           +              P S+++
Sbjct: 40  DIEKDSENNVPILDTPNPEKLTDNDNPDLITVTLPQNEKNTSLLDKGGTQPEQSPKSQDQ 99

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            +  +++    ++ +  S   +           +       I +   D      F K+S 
Sbjct: 100 DVISQQQGIRSEIKESASLDTNTQENSINNPQKVQILKSEIITLRAEDLN----FHKNSI 155

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               E   VL+ I   +  +  ++SI G+TD      IA  N RLSL RA      L++ 
Sbjct: 156 NLKEEAYSVLKDIKNYIEENDYLVSIVGYTDE---SGIAAYNNRLSLRRAEKVSSKLLEL 212

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           G+S+DRI  + G   +    +++       NRR++ 
Sbjct: 213 GLSKDRILDLIGRGENNPINSNETKEGRERNRRVEF 248


>gi|91792625|ref|YP_562276.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91714627|gb|ABE54553.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 223

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 10/196 (5%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
              ++++             +I               I A         +   +    + 
Sbjct: 31  GEEQNAKATNGAMIGAIAGAAIGVASASKKDRAKGALIGAASGAAVGTGIGYYMDVQEAK 90

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L       GV    +   I++++ +      F    ++       VL  +  V     + 
Sbjct: 91  LRKQLKSTGVSVTRSGDNIILNMPNDVT---FGVDETVLSSRAKEVLASVALVAKEFDDT 147

Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
              I G+TD+         N RLS  RA    Q LM+  V+ +R+   SG         +
Sbjct: 148 RLHITGYTDS---SGSDSYNLRLSQVRANEVGQYLMQQKVAANRVVS-SGRGESSPIADN 203

Query: 325 DP--MNSANRRIDILV 338
                 + NRR++I++
Sbjct: 204 GTPAGRAQNRRVEIVL 219


>gi|17549701|ref|NP_523041.1| hypothetical protein RS03061 [Ralstonia solanacearum GMI1000]
 gi|17431956|emb|CAD18633.1| putative outer membrane transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 215

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS      +K+++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSRLENEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE + +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 200


>gi|103488577|ref|YP_618138.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98978654|gb|ABF54805.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 230

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +  R   K         L   +  +        +++ + A         +   +   
Sbjct: 26  DPVTGERKISKAAIGGVGGALGGYLLGDLIGGRSDRTEKIVGAGIGAVAGAGVGYYMDQQ 85

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
              L       G+  E     +++++        FD +S++   +    L  +   LA  
Sbjct: 86  EKKLRERTAGTGIDVERQGDQLVLNMPGDVT---FDLNSAMVKSQFRSALDNVAATLAEY 142

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I + GHTD++        N  LS  RA S    L   G+   R+    G+   +LK
Sbjct: 143 PSTYIDVYGHTDST---GSETYNQGLSERRAASVADYLAGRGIQRARM-ATLGYGESQLK 198

Query: 322 -IASDPMN--SANRRIDILV 338
                       NRR++I +
Sbjct: 199 CAPERTEADYQCNRRVEIRI 218


>gi|268679796|ref|YP_003304227.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617827|gb|ACZ12192.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 266

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            + T    ++N +         K+K        +L+++A+         + +        
Sbjct: 63  PEETTPVMNLNVKSGDAGKEKEKDKGNVGGMSAQLEEIARMAQMIEKMSLGEG------- 115

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDA 274
            +    I  +I       +F   S+     ++++ L++I +++    + + +   G TD 
Sbjct: 116 -SLDQKIDGAIFKLPTKMLFAPGSAEITNSDSMLFLKRISDIITMLPQNVDVVVKGFTDT 174

Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           +P    +  +DN  LS  RA +  +VL+++G++++R+S   G+   +   ++D       
Sbjct: 175 TPPPRGSKYQDNLELSSARANAVIRVLIRNGIAKERLSSA-GYGDTKAIASNDTDEGREK 233

Query: 331 NRRIDILVE 339
           N R++  + 
Sbjct: 234 NSRVEFTMR 242



 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           KKK    + P     W + YADF+++L+A F+ ++ + + + +  KA+++ F        
Sbjct: 3   KKKCKPTECPAG-EKWAVPYADFLSLLLALFIALYALASVNTEKMKALKEEFVKIYDYSA 61

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
              +         +     K       ++   S  L+
Sbjct: 62  KPEETTPVMNLNVKSGDAGKEKEKDKGNVGGMSAQLE 98


>gi|84624549|ref|YP_451921.1| hypothetical protein XOO_2892 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368489|dbj|BAE69647.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 438

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            MF   S+    +   +L+++   L      + + GHTD  P R+   +DN+ LS  RA 
Sbjct: 328 SMFPSGSAELDADQTYLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAE 387

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338
           S   VL  +G+ + R  + SG    +        P   + NRR++IL+
Sbjct: 388 SVGAVL-AAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434


>gi|298207484|ref|YP_003715663.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
 gi|83850120|gb|EAP87988.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
          Length = 626

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 10/163 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
               + ++     + +S       D   +  +       I+       N  +FD   S  
Sbjct: 468 EQAYQAQVNIDDYESNSVTMAATKDATKELTVRLKPIEAIVTEDRVILNPILFDYDKSNI 527

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+    L K+ +V+    E+ I +  HTD    +     N  LS  RA S  Q ++  G
Sbjct: 528 KPQAAFELDKLVQVMNKYPEMEIFVESHTDN---KGPNDYNMSLSERRAKSTVQYVVSKG 584

Query: 304 VSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341
           ++++RI    GF   +  +      SD     NRR + ++  +
Sbjct: 585 IAKERI-SGKGFGESKPAVECGENCSDEQRQTNRRSEFVIIKK 626


>gi|325286633|ref|YP_004262423.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324322087|gb|ADY29552.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 235

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 65/212 (30%), Gaps = 17/212 (8%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +    +   K      +          +        E   +          +    R+ 
Sbjct: 25  DAVQNANNKQKGGAIGAAGGAILGAIIGNNVGKGGNGELGAVIGGVVGGGAGVLIGNRMD 84

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             A+KI   + G   + +  G++             D+ +   FD +       +   L 
Sbjct: 85  KQAQKIEEEIPGAQVERVDDGIVVT----------FDENSGVFFDTAKYNINGASKTSLD 134

Query: 254 KIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           K+  V     +    + GHTD+      A  N  LS +RA +    L   G++  R +  
Sbjct: 135 KLANVFIEYPDTNILVVGHTDS---SGAADYNMTLSKNRANAVTSYLTAKGIAASRFTT- 190

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             F   +    +      + NRR+++ +   +
Sbjct: 191 EWFGEEKPTHDNSTPEGRAKNRRVNVAILPNE 222


>gi|213969192|ref|ZP_03397331.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato T1]
 gi|213926190|gb|EEB59746.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
           tomato T1]
          Length = 151

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 52  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 108

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 109 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 149


>gi|89070721|ref|ZP_01157983.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
 gi|89043679|gb|EAR49884.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
          Length = 1022

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 99/305 (32%), Gaps = 21/305 (6%)

Query: 51   MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN- 109
            M  +  T ++ ++A+             A +         +R        +         
Sbjct: 725  MAALEQTTEEEREALRARLAEAVAARDAARQLADSRLTDLQRRDALLATANAALEGEAAI 784

Query: 110  SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            S + +       +Q  RL N +  L         ++   +   +      +  L ++  +
Sbjct: 785  SAEAQREIALLNEQVTRLRNQVGSLQALLDVAEDEDRANQVQFEALGAQLNNALARAAAE 844

Query: 170  EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E        ++ + L  +  +  QDL +  S     L      + +L       I     
Sbjct: 845  ERRRRELEEAERRRLEEEAARLEQDLQQFRSDFFGQL------RQLLEGREGVQIAGDRF 898

Query: 230  DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI- 280
               +  +F   S+         +  + ++L             VI + GHTD  P     
Sbjct: 899  VFSSEVLFAPGSATLSNAGRAQIASVADLLRDIADDIPDGIDWVIRVDGHTDDLPLSGTG 958

Query: 281  -ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
               DNW LS  RA S  + +    G   DR+   +GF  H+  I  D   +   NRRI++
Sbjct: 959  EYADNWELSQARALSVVRYMEDFLGFPPDRL-AANGFGEHQPLIDEDTEEARAANRRIEL 1017

Query: 337  LVEDR 341
             + +R
Sbjct: 1018 KLTER 1022


>gi|308186535|ref|YP_003930666.1| type VI secretion system, core protein [Pantoea vagans C9-1]
 gi|308057045|gb|ADO09217.1| Putative type VI secretion system, core protein [Pantoea vagans
           C9-1]
          Length = 412

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     V         ++++   +   +F  +++      I V+++I   + + +  
Sbjct: 263 LKPEIDAGLVAVRDEADRSVVTL---KGDGLFASAATEVRGGYIDVIRRIAAAMNNVSGQ 319

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I + G++D  P R+     N+ LSL RA S   +L +      R+    G       + +
Sbjct: 320 IQVIGYSDNVPIRSARFASNFELSLARARSVQTLLQQQLAQPSRVKA-EGRGESNPLVPN 378

Query: 325 DPM--NSANRRIDILVE 339
                 + NRR++I + 
Sbjct: 379 TSAENRARNRRVEITLL 395


>gi|268316337|ref|YP_003290056.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262333871|gb|ACY47668.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
          Length = 253

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +    +P +  + +     K++L+         +  L   N+   V    T  G+ + I 
Sbjct: 65  QSEAVIPSIKNQVVQRRLSKEQLEK----YEELIQYLQEHNLEGKVQVNLTDKGLHLIIT 120

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLS 288
           D     MF    +  +  +  +L+ +  ++    E + + GHTD  P        NW LS
Sbjct: 121 DS---IMFRSGEAEIIEPSRTILRILAGIIDDRIESVVVEGHTDNRPIHTARFPSNWELS 177

Query: 289 LDRAYSAYQVLMKS--GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             RA +  + L++    +   R   + G+     +  +      + NRR++IL
Sbjct: 178 AARAAAVVRFLLEQTDALPPSRYMAV-GYGEFHPRDTNATPEGRARNRRVEIL 229



 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             W   ++D  T+L+ FF+++  ++  +    K    +F 
Sbjct: 18 APFWMTTFSDMATLLLTFFVMIVAMSEVEVKKFKEALSFFQ 58


>gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
 gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
          Length = 474

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++   E    + ++GE +    +  ++  GHTD          N  LS  RA S 
Sbjct: 243 FDIDKALIRAEDHREIARVGEFMQRYPDTTAVIEGHTDNV---GTDEHNLDLSRRRAESV 299

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   G+   R+S  +G+        +        NRRID +++
Sbjct: 300 TNYLVDKFGIDRSRLSS-TGYGFKHPVADNGTEAGKQKNRRIDAIID 345



 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLA 260
                 N     + +       IS  ++    +   F+   +   P     + K+ E + 
Sbjct: 331 EAGKQKNRRIDAIIDCAFDVTKISPPERLCMSLLMEFETGRAEIQPRYHDEIAKVAEYMK 390

Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
                 + I GHTD +     A  N +LS +RA +    L++  G+   R+S   G+   
Sbjct: 391 RYPTTTALIEGHTDNT---GTADFNQKLSQERAENVVNYLVEKLGIERSRLSA-KGYGAS 446

Query: 319 RLKIASDPMNSA--NRRI 334
           R    +        NRRI
Sbjct: 447 RRLAYNTTAEGRKKNRRI 464


>gi|84500108|ref|ZP_00998374.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
 gi|84392042|gb|EAQ04310.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
          Length = 852

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 16/282 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +L          +   ER+++  +  +            ++ S             +   
Sbjct: 572 DLRRQLAAALAAKLEAERAAEESMSEAEQRAALLRQATQELESEQASSADAARRTTVLNQ 631

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q      +      +       +    +S+  + N  L   + E+    + ++  + 
Sbjct: 632 QVAQLRAQLSSLQALLDDYKDRDAANQVQIQSLGSDLNAALAQKAAEERRRRQLEEAERR 691

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVL 252
             +  +  L    ++   +       + G+ I        +  +FD   +         +
Sbjct: 692 RLEAEAERLQKYRSEFFGQLRDVFAGQEGVKIVGDRFVFSSEVLFDPGQADLSEGGQRQI 751

Query: 253 QKIGEVLAH--------STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK- 301
             I   L             V+ + GHTD  P       +DNW LS  RA S  + +   
Sbjct: 752 AGIAATLRSLADEIPEGIDWVLRVDGHTDDVPLSGQGEFQDNWELSQARALSVVRYMEDF 811

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            G   DR+   +GF  H+   + D   +   NRRI++   +R
Sbjct: 812 LGFPPDRL-AANGFGEHQPIASGDSEAARAANRRIELKFTER 852


>gi|15835503|ref|NP_297262.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
           Nigg]
 gi|7190917|gb|AAF39684.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
           Nigg]
          Length = 202

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETI-VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E    +L  +   L  S +    I GHTD       A  N  L   RA +
Sbjct: 98  FATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 154

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G++ DR+  IS +       +  ++     NRR +  +  R
Sbjct: 155 VKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKIHAR 202


>gi|117919364|ref|YP_868556.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117611696|gb|ABK47150.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 485

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  + +    + GHTD    +     N  LS  RA +
Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQNPKLSFYVVGHTDD---KGERSYNQSLSERRAAA 434

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + L     +   +++   G   +    ++        NRR+++++   +
Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484


>gi|326800605|ref|YP_004318424.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326551369|gb|ADZ79754.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 441

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F    +  LPE+  VL+ I  +LA      I + GHTDA       + N  LS  RA +
Sbjct: 337 LFSTGQATILPESEGVLKFIASILAEDQAAKIQVVGHTDAV---GDDKSNQILSERRAEA 393

Query: 295 AYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             + L  + G++E  +   SG         +      + NRR++ +
Sbjct: 394 VKRALTTRYGIAEISLQT-SGKGESEPVADNQTVKGRTRNRRVEFI 438


>gi|320015664|gb|ADV99235.1| putative exported protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 578

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|313200172|ref|YP_004038830.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|312439488|gb|ADQ83594.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 170

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD + ++    +   +QK+ + L       + I GH DA+        N  LS  R
Sbjct: 63  DKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLNKMRIEGHADAT---GRESYNVELSEQR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A++     ++SG+ +  I  + G        ++      + NRR+ I+V   
Sbjct: 120 AWAVADAFIQSGMPKSGII-VRGMGSQSPVASNATVAGRAENRRVSIIVVTD 170


>gi|223039685|ref|ZP_03609971.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
 gi|222879068|gb|EEF14163.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
          Length = 369

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 109/351 (31%), Gaps = 41/351 (11%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-------WIINATDDDTKK--------AI 65
               +  +   ++ I YAD M  LM  F+++       ++++ +D    +         I
Sbjct: 2   KTRSEGKSGDQTFWISYADLMAGLMFVFMLIIGAVVVKYVLSQSDLAKLQKDLSEREKQI 61

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
               N   +      +   +       + +      +   + +     K   TN  + Y+
Sbjct: 62  ASSQNELVRKENVIKEIFSNLDRAKSENKELADINRLVNEMLEGVKKEKNELTNLTQTYE 121

Query: 126 RLENNIFYLSNSQQS---EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
              N+        Q    +  +    RD             E  I      F   +S+  
Sbjct: 122 INLNDANKTIADLQDRVLQLGQILAQRDETLKDVNATLAQKEDVIKVLNEKFNSEISRYL 181

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L     K    +    S   + +       G       +  ++S+ +     +FD  S 
Sbjct: 182 ALEEDFNKTKDKIKDLSSLRSNVISNLRAKLGGKVNIDPSSGVVSLPES---ILFDTGSY 238

Query: 243 IPLPETIVVLQK----------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
               E  V L++            E +    + I I GHT++         N  LS  RA
Sbjct: 239 ELKDEAKVRLKEILQTYFEAILNSEEIIKHIDRIVIEGHTNSV---GSYMYNLDLSQKRA 295

Query: 293 YSAYQVLMKSGVSE--DRISKISGFAHHRLKIAS---DPMNSANRRIDILV 338
           YS    +      +  +R    SG +   L I +   DP  S  RRI+I +
Sbjct: 296 YSVLDFIYSWNKDKRLERYLIASGRSFSDLVIKNGKEDPDAS--RRIEIKI 344


>gi|209809374|ref|YP_002264912.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
 gi|208010936|emb|CAQ81341.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
          Length = 212

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-- 214
                D      ++          + + + +    L     ++       VA+ + +   
Sbjct: 28  PKTKEDAPYPTFEDPYVESQEKVIDVVDSKEVTSALTGPNGELKDDDMRKVAEQLTQMGI 87

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           V  E +   ++I+I ++ +   F  + +   P    +L ++  ++A   E+  +  GHTD
Sbjct: 88  VYHEMSDDQLVITIQEKVH---FASAQATLTPLATSLLNQLISIMATKPELALVLDGHTD 144

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331
                  A +N  LS  R+    + L+ + ++  ++    GF  +     ++       N
Sbjct: 145 ---ISGNAINNQNLSEKRSNEVRRYLLDNNLNASQLYS-RGFGEYLPLCDNETTLGRKCN 200

Query: 332 RRIDILVED 340
           RR++I V  
Sbjct: 201 RRVEITVLK 209


>gi|157368311|ref|YP_001476300.1| putative outer membrane lipoprotein [Serratia proteamaculans 568]
 gi|157320075|gb|ABV39172.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
          Length = 220

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  ++I G+TD++        N  LS  RA      L+  GV+ +R+ + SG  
Sbjct: 137 VLKEYPKTAVNIIGYTDST---GSRALNMTLSQQRADGVGSALITQGVAANRV-RTSGAG 192

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
                 ++      + NRR++I +
Sbjct: 193 PDNPIASNSTTEGKAQNRRVEITL 216


>gi|77460622|ref|YP_350129.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77384625|gb|ABA76138.1| putative OmpA family lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 165

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163


>gi|332291485|ref|YP_004430094.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169571|gb|AEE18826.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 293

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 96/281 (34%), Gaps = 10/281 (3%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           I +         MTA               Q++ D +            +I +     + 
Sbjct: 3   ISRVTKNTLLIAMTAGALTSCVSKKKYTQLQSEYDTTKVTLTKTKVEKEEIEAKYAAIEQ 62

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +  + N    S    +   + S     E   +    ++  K   +     + P    +  
Sbjct: 63  RVDDYNTKINSLRDTNVDLQASNDAKFEITTNGTVMSENTKQKLRAALANVDPSELAQAQ 122

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++    L    K   +    +   N +  +  +   T + ISI D+    +F   S   
Sbjct: 123 TLEDSMNLAVSHKLKRNLNKDIYGANALDDINIDIDDTVVQISISDKM---LFRSGSYRV 179

Query: 245 LPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM- 300
             E   +L++I  V+       + + GHTD+   +  +   DNW LS+ RA +  + L  
Sbjct: 180 SKEADALLRRIAAVVNSEPAVEVMVEGHTDSRTVKKGSYLKDNWDLSVQRATAIVRELQT 239

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           K  V   ++   SG + +   + +D     S NRR  IL+ 
Sbjct: 240 KHNVDPSKLIA-SGRSSYVPLVENDSKENMSRNRRTRILIL 279


>gi|170699332|ref|ZP_02890380.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170135762|gb|EDT04042.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 219

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S++        L K+           + + G+TDA+        N  LS  R
Sbjct: 113 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDAT---GSDGHNQALSKRR 169

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L + G+  D     +G        ++D     + NRR++I ++ 
Sbjct: 170 ADAVAGYLREHGLKADAF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 219


>gi|170702768|ref|ZP_02893624.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170132317|gb|EDT00789.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 222

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       T   +++ GHTD+         N  LS  R
Sbjct: 116 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSV---GNDAANLALSKRR 172

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L   G+   +   +SG        ++        NRR+DI ++ 
Sbjct: 173 AETVAGYLKAHGLKA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 222


>gi|146291559|ref|YP_001181983.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|145563249|gb|ABP74184.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 481

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  +      + GHTD    +     N  LS  RA +
Sbjct: 374 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 430

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
             + L ++  +   +++   G   +    +  +D     NRR+++++   +
Sbjct: 431 VIKQLNEAFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 480


>gi|294670063|ref|ZP_06735018.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291308146|gb|EFE49389.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 162

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                F  +SS         L    + L    +   +I GHTD +        N  LS  
Sbjct: 42  PENVTFPTNSSTLNANAQNALAAAAQTLTQYHDTTLTINGHTDNT---GSDAINDPLSQR 98

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           RA +    L   GVS  R++ I G    +   ++      + NRR++IL+   Q
Sbjct: 99  RAQAVASYLQSRGVSASRMN-IFGHGSRQPIASNATVEGRAQNRRVEILINPDQ 151


>gi|237721048|ref|ZP_04551529.1| outer membrane protein [Bacteroides sp. 2_2_4]
 gi|293372983|ref|ZP_06619352.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|229449883|gb|EEO55674.1| outer membrane protein [Bacteroides sp. 2_2_4]
 gi|292632051|gb|EFF50660.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|295084441|emb|CBK65964.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Bacteroides xylanisolvens XB1A]
          Length = 238

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 74  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227


>gi|186470892|ref|YP_001862210.1| DotU family type IV/VI secretion system protein [Burkholderia
           phymatum STM815]
 gi|184197201|gb|ACC75164.1| type IV / VI secretion system protein, DotU family [Burkholderia
           phymatum STM815]
          Length = 410

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 7/156 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            + +  +  +          L  +     V          +S+   R   +F+   S   
Sbjct: 257 RQAEPPVSPIDALAGRLAGHLADEVNAGTVTLAENAQHTTLSL---RLEGIFEAGQSSVN 313

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGV 304
           P    ++  IG+ +A +   + + GHTD+ PF       N  LS  RA    Q+L+ +GV
Sbjct: 314 PWVKPLITTIGQEVAKTPGRVLVTGHTDSQPFSHMQRSSNLALSDARAQEVAQILVSAGV 373

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + DRI   +G  +      +        NRR++I V
Sbjct: 374 ATDRIDS-TGKGNAEPAADNATPQGRLRNRRVEITV 408


>gi|224438536|ref|ZP_03659456.1| hypothetical protein HcinC1_11101 [Helicobacter cinaedi CCUG 18818]
 gi|313144962|ref|ZP_07807155.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
 gi|313129993|gb|EFR47610.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
          Length = 157

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            +FD        +    L+K    L  +   + + GHTD+         N+ L   RA +
Sbjct: 53  VLFDFDKYDIRQDMEDGLEKSVAALKSTGAKVVLEGHTDSY---GSDAYNYALGTKRANA 109

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILV 338
               L   GVS  +I  +S +   +    + D       NRR++  +
Sbjct: 110 VKNALTTRGVSASQIKTVS-YGESKPACTSGDTPECNQENRRVEFKL 155


>gi|126663670|ref|ZP_01734666.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
 gi|126624253|gb|EAZ94945.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
          Length = 625

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDR 291
               F+ + S    E    L K+  V+    E++     HTD+         N +LS  R
Sbjct: 516 QPIYFEFNKSNITAEGAAELDKLVAVMNEYPEMVIFAKSHTDSR---GSDSYNMKLSDRR 572

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341
           A S  Q L+  G++++RI    GF     K+A    ++  ++ NRR + L+  +
Sbjct: 573 AKSTVQYLISKGIAKERI-SGQGFGESEPKVACKSCTEEEHAQNRRSEFLIVKK 625


>gi|242281268|ref|YP_002993397.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242124162|gb|ACS81858.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 242

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 9/163 (5%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++++ R++DL          +    + + +       G+ + + D+    MF  
Sbjct: 78  ERPWEVLEKQNRIKDLLFPDDVLPPDMDRATLDENLKVLAKPEGVALVLTDKL---MFPL 134

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S       ++L ++  VL +     ++I G+TD      +   N+RLS +RA +    
Sbjct: 135 GKSELDERAKILLYQLVPVLDYLGSADVNIAGYTDN--VGGMRPSNFRLSGERAMAVLTY 192

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            ++ G+  DR+  +S         ++      + NRR++IL++
Sbjct: 193 FVEQGIMNDRL-TVSACGPTFPLYSNTTPEGRAQNRRVEILIK 234


>gi|189218838|ref|YP_001939479.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
 gi|189185696|gb|ACD82881.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
          Length = 342

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 72/284 (25%), Gaps = 10/284 (3%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            +  +         +  + S         P++       +          + +       
Sbjct: 61  KRAELPASIFQARADTQSPSVTPIPALEAPKQIKAINPLVQDVTQANPVRIPMPSVVPGG 120

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
             +   L        +  Q +   +  T  S              S          P+  
Sbjct: 121 APEVAVLSPTPPTEVSPYQEDPKSHFQTLISHLLTGQTSPGVPNTSNILPAGLGHDPIPG 180

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                            +    +  +                 +++ +       +FD  
Sbjct: 181 ASAPGQAGTHPTGTSGGEGIPGVDDIQTQFKAAANFDPRVPQPVVLRLPSD---ILFDFD 237

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S+   P    +L ++ E+L       + I GHTD          N +LS  RA++  Q L
Sbjct: 238 SATIKPNAEPLLFQVLEILKKYNRADVEIGGHTDTF---GDEMYNLQLSEQRAFAVQQWL 294

Query: 300 MKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVED 340
                        +G+      +    S    + NRR++I++  
Sbjct: 295 EAHLPQGMYNFHATGYGKSHPIVNPRGSIEEQARNRRVEIVIRA 338


>gi|89056663|ref|YP_512114.1| chemotaxis protein MotB [Jannaschia sp. CCS1]
 gi|88866212|gb|ABD57089.1| chemotaxis protein MotB [Jannaschia sp. CCS1]
          Length = 277

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 1/125 (0%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG-KNLMTASKGI 83
              ++ G+WK+ YADF+T +MAFF++MW++NAT ++ +K +  YF+P      ++     
Sbjct: 19  GGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTENQRKGLADYFSPTIPVARISGGGDG 78

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
               + P        D S    +        +G    +   ++ E N+  +  +   E  
Sbjct: 79  AFGGDSPFSEDVLSQDGSGATSLRPTEGRQALGLEGTEHDAEQEEANLTEIEGALMGEGG 138

Query: 144 KNSLT 148
            + L+
Sbjct: 139 DSVLS 143



 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 81/227 (35%), Gaps = 2/227 (0%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           +T  +++      +                          L +      S+   E     
Sbjct: 51  TTENQRKGLADYFSPTIPVARISGGGDGAFGGDSPFSEDVLSQDGSGATSLRPTEGRQAL 110

Query: 177 PLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
            L   +  A + +  L ++   +       +++D     +    T  G++I +  +   P
Sbjct: 111 GLEGTEHDAEQEEANLTEIEGALMGEGGDSVLSDLARPHIETRLTDEGLVIEVFSRPGQP 170

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD  + +P P    +   + ++       +++  H  A P        W+ + +RA   
Sbjct: 171 IFDPDTGLPQPWLEELTVSMADLFGTVLNRVAVEAHIAAEPLVRTTESGWQRTTERAQII 230

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             +L   G++  RI++++G +     ++  P+   N RI++++   +
Sbjct: 231 RALLEDGGLNAQRIARVTGHSDREPFVS-PPIAPRNDRIEVILLRER 276


>gi|153949846|ref|YP_001401475.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152961341|gb|ABS48802.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
          Length = 578

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVDALMNIRAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|134292796|ref|YP_001116532.1| hypothetical protein Bcep1808_4087 [Burkholderia vietnamiensis G4]
 gi|134135953|gb|ABO57067.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 214

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +   A++ +++       +   L+G +A            R  ++   I      +
Sbjct: 42  QLTSKLEEAVRARRQEAQQRASLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    P    +L+     +   L    E++ + G  D    R       DNW LS 
Sbjct: 92  FALNSDQLQPAGRDLLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRLFADNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  D   + NRR++I
Sbjct: 152 KRALTVTRALIDAGVPAPSVFAAA-FGSQQPVSSNADDEGRAKNRRVEI 199


>gi|262369640|ref|ZP_06062968.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315708|gb|EEY96747.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 485

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS        +L +   ++  + +V  ++ GHTDA+     A  N  LS +RA + 
Sbjct: 365 FDTASSTIPDVNKSILDQAAALMQKAPQVKLTVMGHTDAT---GDAAVNKTLSQNRAQAV 421

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
              L+  GV   ++  I G+   +    +        NRRI+  V +
Sbjct: 422 VDYLIFKGVDPAQLRAI-GYGQEKPIADNQTDEGKFKNRRIEFEVLN 467


>gi|319424730|gb|ADV52804.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 480

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  +      + GHTD    +     N  LS  RA +
Sbjct: 373 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 429

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
             + L ++  +   +++   G   +    +  +D     NRR+++++   +
Sbjct: 430 VIKQLNEAFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 479


>gi|262368251|ref|ZP_06061580.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
 gi|262315929|gb|EEY96967.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
          Length = 254

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
           +   +        I+   +  R    F+  S++       +L ++   L         I 
Sbjct: 128 LNAQLSVNQAEQQIIDEALKNRIIE-FESGSAVLAVSGTQILDEMAVALNKVGGKKVKII 186

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GHTD+         N  LS +RA +    L+   ++ +R+  + G   ++    +   + 
Sbjct: 187 GHTDS---SGDVAKNLALSKERAVAVKNYLINKSIAAERL-SVEGLGSNKPVADNATADG 242

Query: 330 A--NRRIDI 336
              NRRI+ 
Sbjct: 243 RKKNRRIEF 251


>gi|332668302|ref|YP_004451090.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM
            1100]
 gi|332337116|gb|AEE54217.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 1170

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 18/272 (6%)

Query: 72   FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
              + +++  KG F  Q         +         +    D        +    + E   
Sbjct: 911  ALQAVVSGGKGPFRYQWSDPAGIGPEATAIGAGTYSLTVTDAVGAQKTAQITLTQPEAMS 970

Query: 132  FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              L         K  ++ D  K                        L   + L + R   
Sbjct: 971  IAL-------TKKYGVSEDEVKDGLAAVQVKGGSGTLTYAWSNGETLPTAQKLGLGRNTL 1023

Query: 192  LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
            +   AK  ++T+   +    +  +     R G  I I   +    FD  S       I +
Sbjct: 1024 VVTDAKGCTATIGVEITKKNIPELTAGRIRNGQAIRIEQLQ----FDVDSINIKSSFIPI 1079

Query: 252  LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            L ++ E L  +  +I  + GHT+            RLS  RA S  + L+K G+   R+ 
Sbjct: 1080 LDEVFEFLTDNPGIIVEVGGHTNGLCQ---DEFCIRLSTARAKSVAEYLIKKGIDAKRV- 1135

Query: 311  KISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +  G+        +        N+R++I +  
Sbjct: 1136 QFKGYGRSVPIATNSTPEGRQKNQRVEIKIVR 1167


>gi|330811620|ref|YP_004356082.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379728|gb|AEA71078.1| Conserved hypothetical protein, putative lipoprotein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 244

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 10/149 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L A     GV  +     I + +        F   S+         L  +  
Sbjct: 86  YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIASSFYQPLNNLAN 142

Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +   I I G+TD++      + N  LS  RA S    L   GVS   +S   G  
Sbjct: 143 SLKEFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGANLSA-RGAG 198

Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343
                 ++      + NRR+++ ++   G
Sbjct: 199 PDNPVASNADVNGRAQNRRVEVNLKAIPG 227


>gi|24375456|ref|NP_719499.1| OmpA family protein [Shewanella oneidensis MR-1]
 gi|24350304|gb|AAN56943.1|AE015827_15 OmpA family protein [Shewanella oneidensis MR-1]
          Length = 228

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   F    +        VL  +  
Sbjct: 88  YMDVQETKLRQQLASTGVSVTRSGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 144

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  GV+  R+    G  
Sbjct: 145 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 200

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
                 +  +    + NRR++I++ 
Sbjct: 201 EASPIASNANAEGRAQNRRVEIVLT 225


>gi|152990728|ref|YP_001356450.1| hypothetical protein NIS_0983 [Nitratiruptor sp. SB155-2]
 gi|151422589|dbj|BAF70093.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 225

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 13/136 (9%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----STEVISIRGH 271
               T   ++I + +      F  +S          L++I +VL          I I G+
Sbjct: 93  QLSITTKYVMIRLFNDIV---FKDTSYQLTDRAKQTLKEIAQVLKKLPKNQKFYIKINGY 149

Query: 272 T---DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP- 326
               DAS       D W LS+ RA +    LMK G+   R   ISG+   R   + ++P 
Sbjct: 150 ATIKDASKLPPDIVDAWDLSIKRAEAVAFYLMKQGIDPSRFF-ISGYGDTRPIYSWNNPL 208

Query: 327 MNSANRRIDILVEDRQ 342
           +N  N R++I +E  Q
Sbjct: 209 LNRRNDRVEIYIEVDQ 224



 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 23/50 (46%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
              +   ++  W + + D M++L+ FF++++ ++  D         YF 
Sbjct: 3  KKKPEECPSIPGWLVSFGDLMSLLLTFFILLYAMSTVDVTKALKFLSYFQ 52


>gi|325066515|ref|ZP_08125188.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Actinomyces oris K20]
          Length = 359

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
                G +I++ D     +FD  SS    E    L  +  VL  S      ++GHTD+  
Sbjct: 235 PVQSCGTVITLEDS---VLFDFGSSDLRGEASTTLTNLATVLKDSKAPKVQVQGHTDSV- 290

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MN 328
             +    N +LS  RA +    L  +G + D   +  G+   +    ++           
Sbjct: 291 --SDDAFNQKLSEQRAQAVSSALKSNGATAD--LEAVGYGETKPVAPNENPDGSDNPGGR 346

Query: 329 SANRRIDILV 338
             NRR+++ V
Sbjct: 347 RLNRRVEVFV 356


>gi|148259686|ref|YP_001233813.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146401367|gb|ABQ29894.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
          Length = 227

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           + + +    L       GV    T    + +++        F   S+   P    +L ++
Sbjct: 81  QHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAG---FATGSATLNPRLYPILDQL 137

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           G+ L  +  E + I G+TD++        N+ LS +RA S    L+  G+S  RI    G
Sbjct: 138 GQGLQQNPTETVQIIGYTDST---GSNAINYPLSDNRAASVKTYLVSRGISGQRI-ATRG 193

Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338
                   ++      +ANRR+DI V
Sbjct: 194 MGPQDPVASNATAAGRAANRRVDIYV 219


>gi|260426127|ref|ZP_05780106.1| OmpA domain protein [Citreicella sp. SE45]
 gi|260420619|gb|EEX13870.1| OmpA domain protein [Citreicella sp. SE45]
          Length = 649

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 13/302 (4%)

Query: 49  LVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
           + +     T+      +        P    L      I +  N         +       
Sbjct: 308 VALLAPEGTEQGLFDRVVGELESALPEVFALKAVLPEIPEASNQGPPEFTATLSPEGSVQ 367

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           +           T       R  ++  Y +     +   N   R     + L + ++   
Sbjct: 368 LRGRVHSEIARQTADSFARARFGSDAVYTAARVDPDLPANWSARVLAGLEALGELSNGVV 427

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224
            +  +              A         L +     ++ L  + +   +   T      
Sbjct: 428 RVTPDMVTVSGNTGSTDANAEISGLLADKLGQGAEFEINVLYQEKLDPTLGIPTPDECEA 487

Query: 225 -LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
            ++ I+  R    F+  S+        V+  I E+L    +  + I+GHTD+        
Sbjct: 488 QIVEIVGDRKIN-FEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQ---GRES 543

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            N +LS DRA +    L    V      ++ G+   +    +        NRRI+  +  
Sbjct: 544 MNQQLSQDRAQAVLDALRNRRVLTAS-YRVRGYGEEQPIADNKTEEGREANRRIEFRLIR 602

Query: 341 RQ 342
            +
Sbjct: 603 PE 604


>gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
 gi|189431928|gb|EDV00913.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
          Length = 239

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 8/154 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+             +            + +           SSS+       + +   
Sbjct: 74  KKMDKAAEQAAQIQGAEVEQVTDNNGLQAVKVTFDSGILFSTSSSSLSTSAKSSLSKFAN 133

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            VL  + ++   I G+TD + ++N   +     N  LS  RA S    L+  GVS  +I 
Sbjct: 134 NVLNQNRDMDVAIYGYTDNTGWKNSTAEQSVQKNQELSQARAQSVSSYLLGCGVSASQIK 193

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            + G         +        NRR+++ +   Q
Sbjct: 194 TVEGMGESNPVADNSTEAGRKENRRVEVYMYASQ 227


>gi|270285686|ref|ZP_06195080.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
           Nigg]
 gi|270289694|ref|ZP_06195996.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
           Weiss]
 gi|301337081|ref|ZP_07225283.1| peptidoglycan-associated lipoprotein [Chlamydia muridarum
           MopnTet14]
          Length = 188

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETI-VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S     E    +L  +   L  S +    I GHTD       A  N  L   RA +
Sbjct: 84  FATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 140

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             Q L+K G++ DR+  IS +       +  ++     NRR +  +  R
Sbjct: 141 VKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKIHAR 188


>gi|241767706|ref|ZP_04765331.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
 gi|241361321|gb|EER57865.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
          Length = 219

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +    E    +    +  G  +         I          L       ++++++ +  
Sbjct: 5   DDALDEGAGQTAPVWAVFGDLMAGLLGAFVLILVGVLVVQIDLVASLKQEVEKRQQEEQR 64

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL--- 252
              +   L+  +A               I IS      + +F   S    PE   +L   
Sbjct: 65  RMALEKALAIPLASG-----RVTVHNGRIGIS-----GSVLFATGSDELRPEGRQLLKSL 114

Query: 253 -QKIGEVLAHSTEVISIRGHTDA----SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +   L    E++ + G TD             DN  LS  RA +  + L+  G+   
Sbjct: 115 VPPLQVYLRERDEMLMVSGFTDNTTLLRGPHQRFADNLELSAQRALTVARALIDEGMPSS 174

Query: 308 RISKISGFAHHRLKIAS--DPMNSANRRID 335
           ++   + F   +    +  +   + NRR++
Sbjct: 175 QVFAAA-FGAEQPVADNADEKGRAQNRRVE 203


>gi|84683658|ref|ZP_01011561.1| flagellar motor protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84668401|gb|EAQ14868.1| flagellar motor protein [Rhodobacterales bacterium HTCC2654]
          Length = 617

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 16/220 (7%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            +     + +  +    G  L  +     +  +        L++E+    + ++   +  
Sbjct: 399 DEAEAREEEAQVQVEALGSRLNSALAQVAAEQRALAASQAALAEEERARAELERAEAERL 458

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254
           +  ++ L    ++   +       R GI I        +  +F    +         + +
Sbjct: 459 RAEAADLENYRSEFFGRLRQVLGDRDGIRIEGDRFVFSSEVLFPVGGADLSAAGRQQIAR 518

Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKS-G 303
           +   L             ++ + GHTD+ PFR  A    NW LS  RA S  + +    G
Sbjct: 519 VAGTLRDVASEIPPEINWILRVDGHTDSQPFRGNAEYADNWELSQARALSVVRYMQDQLG 578

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
              DR+    GF   +     D     +ANRRI++ + ++
Sbjct: 579 FPPDRLVAA-GFGEWQPIAEGDSDEALAANRRIELKLTEK 617


>gi|319900153|ref|YP_004159881.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319415184|gb|ADV42295.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 419

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  PE++  + +I +++  +     S+ GHTD++     A  N  LS  R+ S 
Sbjct: 318 FDVGKSVIKPESMGEINRIVQLMTENPTLKFSVEGHTDST---GNATSNQTLSEARSKSI 374

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
              L++ G++ DR++  SG         +  D   + NRR++ +
Sbjct: 375 VDKLVEMGIAADRLTS-SGKGQTTPIADNATDEGRAKNRRVEFV 417


>gi|2251192|emb|CAA90573.1| outer membrane protein [Pseudomonas aeruginosa]
 gi|162319694|gb|ABX84373.1| OprL [Pseudomonas aeruginosa]
          Length = 168

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 69  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS   +  +S +   R           + NRR+++
Sbjct: 126 RYLVLQGVSPATLELVS-YGKERPVATGHDEQSWAQNRRVEL 166


>gi|304312414|ref|YP_003812012.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
 gi|301798147|emb|CBL46369.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
          Length = 244

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L  E       +++   L + +   L+  +A            R  I IS      + +
Sbjct: 46  TLQTEITKRQAEEQQRVALEEALEIALADPLASG-----RITLDRGRIGIS-----GSVL 95

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNWRLSL 289
           F  +S+   PE + +L+++   L    E       + G TD  P +       DNW LS 
Sbjct: 96  FALNSAELQPEGLALLREVSAPLRKYLEQRQELLMVSGFTDDLPIQKGNHSFTDNWALSA 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
           +RA +  + L+ +G+    +   + F   +   ++      + NRR++I
Sbjct: 156 ERALTVTRALIDNGLPSTLVFAAA-FGAEQPIASNSDAEGRAKNRRVEI 203


>gi|117919117|ref|YP_868309.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117611449|gb|ABK46903.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 230

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    +        VL  +  
Sbjct: 89  YMDVQETKLRQQLASTGVSVTRDGDNIVLNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  GV+  R+    G  
Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
                 +  +    + NRR++I++ 
Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226


>gi|114561780|ref|YP_749293.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114333073|gb|ABI70455.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 479

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 8/146 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +     +N   G+  +     I  +     +  +F   S   LPE   +++ + + L 
Sbjct: 337 RIIEETTLNNNRVGIDLQGLTDEIAKTGHVALDGLLFKYDSDELLPEAYPIVEVVAQYLQ 396

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
              +    + GH+D          N  LS  RA +    L+K   +S  ++    G   +
Sbjct: 397 THPKQLFYVVGHSDDQ---GSQAYNQTLSEKRATAIKTRLIKQFSISAQQVEA-KGVGEY 452

Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342
                +        NRR+++++    
Sbjct: 453 SPIANNLDEAGQKQNRRVELVIRSDN 478


>gi|256421238|ref|YP_003121891.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256036146|gb|ACU59690.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 594

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 13/119 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               +D + S   P +   L ++  +L    ++ I +  HTD+   +     N +LS  R
Sbjct: 480 ENVYYDFNESYLQPASFPSLDRLVAMLKKYPKIVIELSAHTDS---KGSNDLNEKLSDAR 536

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDRQ 342
           A S    L+  G+   R+    G+A       +            + NRR +  +  R+
Sbjct: 537 AKSCVDYLVSQGIESTRLQA-KGYAASHPVAPNTNKDGSDNPEGRARNRRTEFKILSRE 594


>gi|238752234|ref|ZP_04613714.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia rohdei ATCC 43380]
 gi|238709502|gb|EEQ01740.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia rohdei ATCC 43380]
          Length = 153

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD             ++ IG  L +     + + GHTD++        N +LS  R
Sbjct: 47  NKVLFDTDIRELNSTGKQTVESIGRALHNVGINHLRVDGHTDST---GEDGYNQQLSYQR 103

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           A +    L  SG+   RI  + G         +      + NRR+ I+V  
Sbjct: 104 AAAVADSLSASGIPRARID-VRGRGELEPAADNKTAQGRAENRRVAIIVTA 153


>gi|89055277|ref|YP_510728.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88864826|gb|ABD55703.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 481

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S+      +  + ++   +       + + GHTDA         N  LS +RA +
Sbjct: 377 LFDFDSATLRRAGLQAVSELAAAIRSGQVSQVIVDGHTDA---AGSDAYNQTLSQERAVA 433

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
             Q LM  GV++  +     F   R    +        NRR+++L+
Sbjct: 434 VAQALMVQGVAQG-LLTTRAFGESRPVADNGSEAGAQQNRRVEVLL 478


>gi|51597552|ref|YP_071743.1| PAL/OmpA family membrane protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186896682|ref|YP_001873794.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590834|emb|CAH22486.1| Putative PAL/OmpA-family membrane protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699708|gb|ACC90337.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 578

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|22126581|ref|NP_670004.1| hypothetical protein y2702 [Yersinia pestis KIM 10]
 gi|22127241|ref|NP_670664.1| hypothetical protein y3365 [Yersinia pestis KIM 10]
 gi|45443207|ref|NP_994746.1| OmpA family membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806286|ref|YP_650202.1| OmpA family membrane protein [Yersinia pestis Antiqua]
 gi|108812671|ref|YP_648438.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|145597850|ref|YP_001161926.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
 gi|149367019|ref|ZP_01889052.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
 gi|218928146|ref|YP_002346021.1| putative OmpA family membrane protein [Yersinia pestis CO92]
 gi|229840896|ref|ZP_04461055.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842543|ref|ZP_04462698.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229903796|ref|ZP_04518909.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|270486867|ref|ZP_06203941.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|270487580|ref|ZP_06204654.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294502870|ref|YP_003566932.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
 gi|21959587|gb|AAM86255.1|AE013873_3 hypothetical [Yersinia pestis KIM 10]
 gi|21960312|gb|AAM86915.1|AE013938_3 hypothetical [Yersinia pestis KIM 10]
 gi|45438075|gb|AAS63623.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776319|gb|ABG18838.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|108778199|gb|ABG12257.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
 gi|115346757|emb|CAL19641.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
 gi|145209546|gb|ABP38953.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
 gi|149290633|gb|EDM40709.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
 gi|229679566|gb|EEO75669.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|229690853|gb|EEO82907.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697262|gb|EEO87309.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|262361491|gb|ACY58212.1| putative OmpA-family membrane protein [Yersinia pestis D106004]
 gi|262365418|gb|ACY61975.1| putative OmpA-family membrane protein [Yersinia pestis D182038]
 gi|270335371|gb|EFA46148.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|270336084|gb|EFA46861.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294353329|gb|ADE63670.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
 gi|320013943|gb|ADV97514.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 578

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|50083884|ref|YP_045394.1| putative lipoprotein [Acinetobacter sp. ADP1]
 gi|49529860|emb|CAG67572.1| putative lipoprotein precursor [Acinetobacter sp. ADP1]
          Length = 159

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +F+   S   P     + ++   L       + + G+TD          N +LS  
Sbjct: 52  PERLLFEFDKSEVNPAHQQEIIRLANQLNKYGLHKLKVVGYTDNI---GNRDYNLKLSQA 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S   + + +  + + I +I G   ++  + +      +ANRR+ I++
Sbjct: 109 RAQSVAAIFINNSFTPNHI-QIIGRGSNQPLLPNTTEENRAANRRVAIVI 157


>gi|237716264|ref|ZP_04546745.1| outer membrane protein [Bacteroides sp. D1]
 gi|294807688|ref|ZP_06766481.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229443911|gb|EEO49702.1| outer membrane protein [Bacteroides sp. D1]
 gi|294445124|gb|EFG13798.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 238

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 74  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227


>gi|94314001|ref|YP_587210.1| hypothetical protein Rmet_5082 [Cupriavidus metallidurans CH34]
 gi|93357853|gb|ABF11941.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 217

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 10/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            M+   RL++  K+    L                 R  +    I      +F  +S   
Sbjct: 41  QMELSARLENEVKQRQEELKRRQTLEEALAGPLAAGRVTLKDGRIGISGNVLFALNSDQL 100

Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQ 297
            PE   +L+ +   L+        ++ + G TD    R       DN  LS  RA +  +
Sbjct: 101 QPEGRALLKSLAAPLSAYLGARDEILMVSGFTDDQQVREGNRRFADNLELSAQRALTVTR 160

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            L+++G+    I   + F   +   ++      + NRR++I
Sbjct: 161 ALIEAGLPPASIFSAA-FGSQQPVASNATEESRAKNRRVEI 200


>gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
 gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
          Length = 2033

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 95/286 (33%), Gaps = 13/286 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
             F   L   SKG   ++         + D S  + I        +   +      +L++
Sbjct: 672 TDFVVKLKPPSKGQVTQRLSSRIEPVTERDKSNAKDIALALNQKIVYRVDLTGTGVKLKD 731

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               +       +   S T D    +   K  +     +  +         E    +  +
Sbjct: 732 LRSLIMLPPGVSYKTGSATLDGNTIQAPKKYDEQTLLFSLNDPGEDWGHLLEFEAWITEQ 791

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLP 246
            +  +L+ +  +        N    V   +    ++     +      P F   S     
Sbjct: 792 AKAGELSTRSVAMFDSPSEANQRTPVAITSALLSLVPENKEVHKPEEAPKFSSFSRDLSQ 851

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMK 301
             I  ++ + E L    +  I + GHTD  P          +N+ LSL RA SA   LM+
Sbjct: 852 ADINAMKSVLEQLRGLEDLRIEVAGHTDNVPIAKRSRHIFNNNYELSLARARSAADYLMR 911

Query: 302 S-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI-LVEDRQG 343
              +  +++  ISG+   R      ++   + NRR+++ ++  R G
Sbjct: 912 ELELGPEQV-TISGYGSQRPVTNNGNEQSRALNRRVEVNILAARDG 956


>gi|254524607|ref|ZP_05136662.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
 gi|219722198|gb|EED40723.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
          Length = 250

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P  + +L ++   +A   +    I GHTD          N  LS  RA + 
Sbjct: 149 FQSGSARLTPFGMSILDEMVAKMAQMPDSRFLIIGHTDNV---GQRESNLTLSHARALAV 205

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
              +M  G+    +  + G         +  +   + NRRI+  ++
Sbjct: 206 KNYMMSKGIPGSHMD-VLGKGPDEPVADNTSNDGRARNRRIEFKIQ 250


>gi|298368928|ref|ZP_06980246.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282931|gb|EFI24418.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 216

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
             +  E      +++ ++ S  +       P++                A   +S+ +  
Sbjct: 14  GQKPDEPAAQQQQASPVQASTTETPQTQPEPVAPSAPAHATTPAPASAPATAQNSSAAAQ 73

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265
            +    +      T TG  I I    +  +FD   +   PE    LQK  +++      +
Sbjct: 74  GSSLTAQSSSLSGTETGFNIQIN-LSSDVLFDFDKAELKPEADRELQKAADIIRQKGKGL 132

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           I I G+TD+   +     N RLSL RA +        G+ ++   +  G         + 
Sbjct: 133 ILISGYTDS---KGTDAYNKRLSLVRAQAVKNWFEAQGLHQN--YQTEGLGAANPVAPNT 187

Query: 326 --------PMNSANRRIDILVEDRQ 342
                      + NRR++I+V   +
Sbjct: 188 NDDGSDNPEGRAKNRRVEIIVNKTK 212


>gi|146344294|ref|YP_001202150.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
 gi|146188106|emb|CAM96436.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
          Length = 220

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 9/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           S+ L   +    +         TG  +  I+      F  +S+   P     L  I   L
Sbjct: 80  SAKLKEELRQKGMDATTSLDPVTGRQMMTIEAPADIAFATASADLQPAAFQGLSAIATAL 139

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               +  + I GHTD +      + N  LS  RA +  Q L  +GV   ++  + G    
Sbjct: 140 KDQKDLRLEITGHTDGT---GSRQFNNVLSYARAQAVAQYLYAAGVPA-QVIAVRGVGPS 195

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
                       + NRR++I +  +QG
Sbjct: 196 MPVATDATTQGRAQNRRVEIQI--KQG 220


>gi|145301089|ref|YP_001143930.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853861|gb|ABO92182.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 218

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        +++++    N   FD SS+         L  +  
Sbjct: 78  YMDVQEAKLREKLQGTGVSVTRNGDELILNM---PNNVTFDSSSAQLKAAGANTLSGVAM 134

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V+A      +++ GHTD++        N +LS  RA +    L+  GV+  RIS   G  
Sbjct: 135 VVAEFDKTRLNVVGHTDST---GSRDLNMKLSAQRADAVAAQLIGHGVTGSRIST-QGVG 190

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
             +    +      + NRR+ I +
Sbjct: 191 PDQPVATNSTAAGKAQNRRVTITL 214


>gi|325297821|ref|YP_004257738.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324317374|gb|ADY35265.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 239

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+             +            + +       +F  SSS         L K  
Sbjct: 74  KKMDKAAEQAAQIEGAEVEQVTDNNGLQAVKVTFDSG-ILFATSSSDLSTSAKSALSKFA 132

Query: 257 EV--LAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
               + +    ++I G+TD + ++N   +     N  LS  RA S    L + G +  +I
Sbjct: 133 NNVLIQNPDMDVAIYGYTDNTGWKNSTAEQSVQKNLELSQSRAQSVSNYLRECGTTTSQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G         +        NRR+++ +   Q
Sbjct: 193 KTVEGLGESNPVADNSTEAGRQENRRVEVYMYASQ 227


>gi|123440951|ref|YP_001004940.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122087912|emb|CAL10700.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 169

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD          +  +Q IG  L +     + + GHTDA         N +LS  R
Sbjct: 62  NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGHTDAI---GEDGYNQQLSFQR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+    I ++ G         +      + NRR+ I+V   
Sbjct: 119 ASAVADTLAAIGIPRTNI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169


>gi|160876689|ref|YP_001556005.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|160862211|gb|ABX50745.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|315268889|gb|ADT95742.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 485

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL  +   L         + GHTD    +     N  LS  RA +
Sbjct: 378 LFDYDSERMLPESKPVLDVLASYLKQHPALSFYVVGHTDD---KGERSYNQSLSERRAAA 434

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + L     +   +++   G   +    ++        NRR+++++   +
Sbjct: 435 VIKQLSDGFQIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484


>gi|83717671|ref|YP_439345.1| hypothetical protein BTH_II1148 [Burkholderia thailandensis E264]
 gi|167577759|ref|ZP_02370633.1| hypothetical protein BthaT_06461 [Burkholderia thailandensis TXDOH]
 gi|167615886|ref|ZP_02384521.1| hypothetical protein BthaB_06301 [Burkholderia thailandensis Bt4]
 gi|257142466|ref|ZP_05590728.1| hypothetical protein BthaA_25103 [Burkholderia thailandensis E264]
 gi|83651496|gb|ABC35560.1| ompA family protein [Burkholderia thailandensis E264]
          Length = 215

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +++++      K +   L+G +A            R  ++   I    + +
Sbjct: 43  ELSSKLDAEVRQRQWESQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P    +L+ +   LA       E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRAGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +    +  D   + NRR++I
Sbjct: 153 KRALTVTRAFIDEGVPASSVFAAA-FGSEQPVSPNSDDAGRAKNRRVEI 200


>gi|71282150|ref|YP_271418.1| ompA family protein [Colwellia psychrerythraea 34H]
 gi|71147890|gb|AAZ28363.1| ompA family protein [Colwellia psychrerythraea 34H]
          Length = 367

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + ++   +   ++ K+ + +    +  ++I+GH+ A   +  A  N  LS  RA + 
Sbjct: 256 FDSNKAVVKEKYKPIMVKVAKFMEAYPDLSLTIKGHSSA---KGSAAYNQTLSAKRAQAV 312

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
             VL+   GV   R++ I G+    L    +   +   NRRI+  +    
Sbjct: 313 VDVLINDFGVDASRLNSI-GYGESELLNTDNTAAAHEQNRRIEATISTTN 361


>gi|119383378|ref|YP_914434.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119373145|gb|ABL68738.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 768

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 15/300 (5%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + ++     +                     +  +      P  +     + S       
Sbjct: 325 VALFAPADVEAAQFDEAVGRLEAAL----PPAFTLAARHEKPGEAEAGPAEFSALVDPGG 380

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT---RDSEKGKDLCKSTDLEK 165
            S+  +I     +   + L    F   +S              R     + L      E 
Sbjct: 381 VSLRGRITDERMRDAVESLARARFGQVDSALRSDVSVPEGWTLRAIAALEALDGLARGEA 440

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224
            + ++          +    M   +  Q L       L+      +   +   +    + 
Sbjct: 441 KVTRDLVRISGVSGSQTASDMAAARLAQRLGAGARYELAIRYDRRMDPLLGLPSGIECVD 500

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283
            ++   Q++   F+ + S+   +    L+++ E +    +    I GHTD+         
Sbjct: 501 RLNAAMQQSEIGFEPNKSVIAGDPGPTLERLAETMKLCADFRIEIGGHTDSQ---GSEGF 557

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N  LS  RA +    +  +G+    ++   G+   +    +D       NRRI+ L+   
Sbjct: 558 NAELSRARAQAVLAAMTAAGIDTANMTA-KGYGESQPIADNDTDAGREANRRIEFLLLAD 616


>gi|83949579|ref|ZP_00958312.1| OmpA family protein [Roseovarius nubinhibens ISM]
 gi|83837478|gb|EAP76774.1| OmpA family protein [Roseovarius nubinhibens ISM]
          Length = 171

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   S+   P     LQ+        +    I GHTD+         N  LSL RA S 
Sbjct: 73  LFATDSANISPSGRARLQQFFRDANAVS--YIITGHTDSR---ASDAYNMNLSLRRANSV 127

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            +V +++G    RI+ + G+     K ++       ANRR++I+
Sbjct: 128 ARVAVQTG---ARIADVRGYGERMPKASNATAAGMQANRRVEII 168


>gi|38422322|emb|CAE45324.1| unnamed protein product [Magnetospirillum gryphiswaldense]
 gi|144897900|emb|CAM74764.1| Outer membrane protein and related peptidoglycan-associated (lipo)
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 163

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I +  +   FD        +    L K    L        +I GH D          N  
Sbjct: 52  IANVGDRVFFDFDKYALRADAKGSLDKQAAWLKKYPTYSLTIEGHADER---GTREYNLA 108

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           L   RA S  + L+ +GV   R+  IS +   R     +++   S NRR
Sbjct: 109 LGERRANSVKEYLVGAGVPAARVKTIS-YGKERPVALGSNEAAWSQNRR 156


>gi|237806321|ref|ZP_04593025.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331027434|gb|EGI07489.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 194

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 52  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 108

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 109 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQTHL-SVRGAGPD 164

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 165 QPIASNADVNGRAQNRRVEVNLKPIPG 191


>gi|90022173|ref|YP_528000.1| peptidoglycan-associated lipoprotein [Saccharophagus degradans
           2-40]
 gi|89951773|gb|ABD81788.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 163

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
             ++I       FD   ++   E    L    +V+  +   I + GH D          N
Sbjct: 52  RDALIGVDTVFYFDFDQAMLRSEARAALLIHAKVIKETNASIRLEGHADER---GSREYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336
             L   RA +    L+  GV    I  +S +   R     +++   S NRR++I
Sbjct: 109 MALGERRANAVRDFLVLQGVPSYSIETVS-YGEERAAQVGSNESAWSKNRRVEI 161


>gi|77747768|ref|NP_636149.2| hypothetical protein XCC0758 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761295|ref|YP_244539.2| hypothetical protein XC_3475 [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 403

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283
           +I++ D+    +FD   +   P+   VL  +   L   +   + +RGHTDA   +     
Sbjct: 288 VITLSDR---ILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 341

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336
           N  LS  RA +    L   G ++   +   G+   +    +      +P     NRR+++
Sbjct: 342 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 399

Query: 337 LVE 339
            + 
Sbjct: 400 FLR 402


>gi|320353100|ref|YP_004194439.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
            2032]
 gi|320121602|gb|ADW17148.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 1326

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 88/281 (31%), Gaps = 10/281 (3%)

Query: 59   DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
             + + A  +          + +            ++Q +    +   + +    L+    
Sbjct: 1048 AEQRAAKAEATVQQLSASQSENSRKVKALEDQLAAAQKQAQQDLVPTLNQQIATLRDQLA 1107

Query: 119  NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
              +    +++ ++   + + +S+       +D  +       T + +   + E     P 
Sbjct: 1108 QMEAASAQMKKSLTENAQAAESKTQALQAEKDGLQQSLTASQTTIAELRKQLEQLKAQPQ 1167

Query: 179  SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +             D  K   +  + L   +     +           I+   N   F 
Sbjct: 1168 PEAVAPLTAATPAADDQDKDGVADAADLCPGSPAGSPVNGLGCPAGKGIILQGVN---FA 1224

Query: 239  KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              +++   E+   L  +   LAH  ++   + G+TD+       + N  LS  RA S   
Sbjct: 1225 SGTAVFTQESRKNLDTVAAALAHVPQMRVEVAGYTDS---AGDPKKNLDLSAQRAQSVVD 1281

Query: 298  VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
             L   GV+  +++   G+        +        NRR+++
Sbjct: 1282 YLQTKGVARAQLTA-KGYGKENPIADNATAAGKQKNRRVEL 1321


>gi|332283816|ref|YP_004415727.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
 gi|330427769|gb|AEC19103.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
          Length = 223

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 10/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++   +L++            ++               ++   I    + +F  +S+  
Sbjct: 41  QLELSAKLEEEVLHRQEETQRRISLEQALARPLAEGSVTLIDGRIGISGSVLFALNSAQL 100

Query: 245 LPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSLDRAYSAYQ 297
             E   VL+ +   L+       +++ + G TD            DNW LS  RA +  +
Sbjct: 101 QAEGHDVLESLVAPLSDYLQSHDQILMVSGFTDDQQVLQGNRRFDDNWDLSAQRALTVTR 160

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            L+ +G+    +   + F   +   ++  +   + NRR++I
Sbjct: 161 ALIAAGIPSSSVFAAA-FGAEQPVASNADEQGRAKNRRVEI 200


>gi|326388398|ref|ZP_08209994.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207130|gb|EGD57951.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
          Length = 172

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+        E+  +LQ   + LA       +I GH D          N  L   RA +A
Sbjct: 70  FELDKYNVDTESQGILQSQAQWLAKYPGKKITIEGHCDER---GTREYNLALGERRANAA 126

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339
              L+  GV   RI+ +S +   R     + +   + NRR + I VE
Sbjct: 127 KTYLVGLGVDASRINTVS-YGKERPIALGSDEASWAKNRRAVTITVE 172


>gi|170023051|ref|YP_001719556.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           YPIII]
 gi|169749585|gb|ACA67103.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
          Length = 578

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|126729072|ref|ZP_01744886.1| OmpA/MotB [Sagittula stellata E-37]
 gi|126710062|gb|EBA09114.1| OmpA/MotB [Sagittula stellata E-37]
          Length = 297

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
               +F   SS  +P+    L ++   +A  +     + GHTDA+        N  LS +
Sbjct: 190 DGAVLFAHDSSDLMPDAKAALDELAAQIADANLSAFRVVGHTDAT---GSDAYNLTLSQE 246

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           RA +         V  +      G        +++       NRR++I+
Sbjct: 247 RAAAVRDYYASMDVLTNVSISSEGRGESNPLASNETEEGREQNRRVEII 295


>gi|319406244|emb|CBI79881.1| Outer membrane lipoprotein omp16 [Bartonella sp. AR 15-3]
          Length = 168

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS    +   +L +  E L        +I GH D          N  L   R
Sbjct: 58  DRIFFSLDSSSIESDAEYILARQAEWLLRYPHYFITIEGHADER---GTREYNLALGQRR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           A +    L+  GVS  R++ +S +   R      +    + NRR  ++V + +
Sbjct: 115 AVAVRDYLISLGVSSQRMNTVS-YGKERPVAICDNISCWNQNRRAVLVVNNTR 166


>gi|285019096|ref|YP_003376807.1| outer membrane protein [Xanthomonas albilineans GPE PC73]
 gi|283474314|emb|CBA16815.1| hypothetical outer membrane protein [Xanthomonas albilineans]
          Length = 216

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 10/154 (6%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L    ++            +   V   T R  ++   I  R   +F  +S    P+   
Sbjct: 47  KLDAQMRQQQREAQQRKTLELALAVPLATGRVTLIDGRIGIRGNVLFALNSDQLQPQGRD 106

Query: 251 VLQ----KIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSG 303
           +L      +   L    E++ + G TD    R   R   DNW LS +RA +  + L+ +G
Sbjct: 107 LLDSLATPLAGYLKARNEILMVSGFTDDRQVRVGNRQFVDNWELSAERALTVTRALIDAG 166

Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
           V  D I   + F   +   ++  D   ++NRR++
Sbjct: 167 VPADAIFAAA-FGAQQPVASNADDAGRASNRRVE 199


>gi|162451106|ref|YP_001613473.1| hypothetical protein sce2834 [Sorangium cellulosum 'So ce 56']
 gi|161161688|emb|CAN92993.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 634

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 76/258 (29%), Gaps = 8/258 (3%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P  R +             +N   ++    +       L                     
Sbjct: 381 PGARDACPYAHGPASADAKRNGCPVEDEDEDGVADQDDLCPRAAAGPGGGDPSRRGCPAD 440

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
           +D +   D   +   EK                +    +    L D A            
Sbjct: 441 QDGDGLPDALDACPAEKGDAAGGATRPGCPPAPRQPTDQDGDGLPDDADACPREKGPASG 500

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
           D    G        G  I +++     +     +   P++  VL ++ +V+    E + I
Sbjct: 501 DARASGCPTRVRVQGEQIVLLEPVVFRVLKNDPAPIDPKSEAVLAEVRDVIEQHPEWVKI 560

Query: 269 R--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
               HTD       AR N  L+  RA +  + L+  G++ +R+    G+   +       
Sbjct: 561 EVSAHTD---GAGNARFNETLTTARAEAVRRWLVGKGIAAERLVA-KGYGASQPISDDRS 616

Query: 327 MNSA--NRRIDILVEDRQ 342
                 NRR+ +LV +++
Sbjct: 617 AAGREKNRRVQLLVLEKR 634


>gi|299145363|ref|ZP_07038431.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
 gi|298515854|gb|EFI39735.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
          Length = 238

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 74  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227


>gi|291336865|gb|ADD96397.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C206]
          Length = 189

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 8/154 (5%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD  T+LMAFF+++      +    K I                    
Sbjct: 19  PPAGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLREAFGVQKVVPVVEQP 78

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             +  I  E +P    +           +    ++L+  + +     +  + N    +  
Sbjct: 79  KGTTVISLEFSPSPTPAITDTLRQQTTELQAPELELQTKTEDSPDGSETDKQNKSDFAGE 138

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
                 +   T  +++ K    + ++   +  E 
Sbjct: 139 GGEGADQLDATELAKQLKKAIDTGEVTVEMLGEN 172


>gi|153946939|ref|YP_001399719.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152958434|gb|ABS45895.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
          Length = 578

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|45441186|ref|NP_992725.1| hypothetical protein YP_1360 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595824|ref|YP_070015.1| OmpA family outer membrane protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108806760|ref|YP_650676.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
 gi|145598791|ref|YP_001162867.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
 gi|149366559|ref|ZP_01888593.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|167467063|ref|ZP_02331767.1| hypothetical protein YpesF_04015 [Yersinia pestis FV-1]
 gi|218928612|ref|YP_002346487.1| hypothetical protein YPO1469 [Yersinia pestis CO92]
 gi|229841445|ref|ZP_04461604.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843557|ref|ZP_04463700.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|294503448|ref|YP_003567510.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
 gi|45436046|gb|AAS61602.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589106|emb|CAH20726.1| OmpA family of outer membrane porins [Yersinia pseudotuberculosis
           IP 32953]
 gi|108778673|gb|ABG12731.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
 gi|115347223|emb|CAL20117.1| putative exported protein [Yersinia pestis CO92]
 gi|145210487|gb|ABP39894.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
 gi|149290933|gb|EDM41008.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|229689165|gb|EEO81228.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697811|gb|EEO87858.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|262364848|gb|ACY61405.1| hypothetical protein YPD8_0715 [Yersinia pestis D182038]
 gi|294353907|gb|ADE64248.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
          Length = 578

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549


>gi|254283478|ref|ZP_04958446.1| OmpA family protein [gamma proteobacterium NOR51-B]
 gi|219679681|gb|EED36030.1| OmpA family protein [gamma proteobacterium NOR51-B]
          Length = 199

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIR 269
             +GV  E     +LI +     T  F   S++     + +L  +  VL   +  +I I 
Sbjct: 53  AREGVSVERRDDHLLIVM---PGTASFASDSALLKSNMLGLLDDLSTVLQEFNKSLIFIG 109

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GH+D+         N  LS  RA +    L K G+   R+  + GF   +    +D  + 
Sbjct: 110 GHSDSLGDSG---YNLYLSRQRALAVGTHLSKVGIDSWRLV-VRGFGDAKPIATNDTESG 165

Query: 330 A--NRRIDILV 338
              NRRI++ V
Sbjct: 166 RAGNRRIELTV 176


>gi|113969010|ref|YP_732803.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113883694|gb|ABI37746.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 230

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    +        VL  +  
Sbjct: 89  YMDVQETKLRQQLASTGVSVTRDGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  GV+  R+    G  
Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
                 +  +    + NRR++I++ 
Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226


>gi|330443988|ref|YP_004376974.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
 gi|328807098|gb|AEB41271.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
          Length = 189

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  S      E + +L  +   +  S +V   I GHTD       A  N  L   RA +
Sbjct: 85  FETDSYSIKGEENLSILTTLVHHMKKSPKVTLYIEGHTDER---GAASYNLALGSRRANA 141

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
               L+K G+S +R+  IS +     +           NRR +  +  R
Sbjct: 142 VKNYLIKQGISAERLFTIS-YGKEHPRNPGHDELAWQQNRRTEFKIYAR 189


>gi|329114347|ref|ZP_08243109.1| Outer membrane protein [Acetobacter pomorum DM001]
 gi|326696423|gb|EGE48102.1| Outer membrane protein [Acetobacter pomorum DM001]
          Length = 376

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   S+       ++ +  +   H     I + G+TD S   P     + N  LSL 
Sbjct: 267 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 326

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV    I  + G+      + +  +     NRR++I++
Sbjct: 327 RADSVKAELIRDGVPASAID-VHGYGEAHPLVPTGPNTREPQNRRVEIIL 375


>gi|258541881|ref|YP_003187314.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
 gi|256632959|dbj|BAH98934.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
 gi|256636016|dbj|BAI01985.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
 gi|256639071|dbj|BAI05033.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
 gi|256642125|dbj|BAI08080.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
 gi|256645180|dbj|BAI11128.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
 gi|256648235|dbj|BAI14176.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
 gi|256651288|dbj|BAI17222.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654279|dbj|BAI20206.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
          Length = 375

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   S+       ++ +  +   H     I + G+TD S   P     + N  LSL 
Sbjct: 266 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 325

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV    I  + G+      + +  +     NRR++I++
Sbjct: 326 RADSVKAELIRDGVPASAID-VHGYGEAHPLVPTGPNTREPQNRRVEIIL 374


>gi|149277661|ref|ZP_01883801.1| possible outer membrane protein [Pedobacter sp. BAL39]
 gi|149231349|gb|EDM36728.1| possible outer membrane protein [Pedobacter sp. BAL39]
          Length = 174

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             N   F+ +S +    +  +L ++   +     V  +      S        N  LS+D
Sbjct: 67  NFNNIQFEFNSDVLKTASFEILDQVVREMKKDLTVGFVLN--GNSSAEGSVEHNLSLSVD 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA S    L+ +G+    +  I GF   +    +D       NRR++I
Sbjct: 125 RANSVKSYLVNAGIPAANL-SIKGFGATKPITTNDSEEGRALNRRVEI 171


>gi|258405704|ref|YP_003198446.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
           5692]
 gi|257797931|gb|ACV68868.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
           5692]
          Length = 199

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             + +++S    D         +       ++ + R    FD  S    P+   VLQ   
Sbjct: 57  MDMETSVSEEPKDVDEWEAKESSGAAEEEKALSNLREEIYFDFDSFELKPDARDVLQDKA 116

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L  +     I  GH D          N  L   RA +AY+ L+  G+  +R+  +S +
Sbjct: 117 ALLDDNPGYKMIIEGHCDER---GTQEYNLALGERRARAAYEFLILLGIDANRLQIVS-Y 172

Query: 316 AHHRLKI--ASDPMNSANRRIDILV 338
              R  +  +++   + NRR +  +
Sbjct: 173 GEERPAVEGSNEAAWAKNRRCEFKI 197


>gi|120597137|ref|YP_961711.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|120557230|gb|ABM23157.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
          Length = 481

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  +      + GHTD    +     N  LS  RA +
Sbjct: 374 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 430

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
             + L ++  +   +++   G   +    +  +D     NRR+++++   +
Sbjct: 431 VIKQLNETFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 480


>gi|329915272|ref|ZP_08276241.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544948|gb|EGF30290.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 212

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 18/166 (10%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS      + +++  +     +   L+          +   T R  +    I      +
Sbjct: 42  ELSSSLQDEIAKRQAEEQRRMTLEKALA----------IPLATGRITLNNGRIGISGQVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF-RNIARDNWRLSLDR 291
           F  +S    PE   +L  + + L            + G TD          DNW LS  R
Sbjct: 92  FGLNSDQLQPEGRQLLTTLVKPLQAYLTTRDELLMVSGFTDDISIRGGRFADNWELSAQR 151

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
           A +  + L+  G+    +   + F   +    +  D   + NRR++
Sbjct: 152 ALTVTRALIDEGMPSAMVFAAA-FGAEQPVSPNTDDAARAQNRRVE 196


>gi|319796166|ref|YP_004157806.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315598629|gb|ADU39695.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 273

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 10/277 (3%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           ++ Y       L     G    Q      ++ +   +      +     ++     +   
Sbjct: 1   MKSYLRVLSFTLGLVMVGAVQAQTAAAPGARVETTPAASAKGEQVVAGGQVPDEATRVAV 60

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
                 I+  S         N+++  +    ++ +             + +         
Sbjct: 61  IEALRRIYGPSGVVDKIEVVNTVSMPANWSANVQRLITPALKDIHRGQFQIEGTQMALSG 120

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            +  +   Q +   ++++L+          V        I +       T  F+  S+  
Sbjct: 121 EVGNEALRQKIVSDMANSLNPTYTIKNSLRVPVSEQ---ITVDQALANRTIEFELGSATL 177

Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L ++  +L   T     + GHTD          N  LS  RA +    L+  G
Sbjct: 178 TRKGRDILDEMAPILQKLTNKSVAVIGHTDN---AGSRASNLALSQSRAEAVKGYLVGKG 234

Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +    ++  SG    +    +  D   S NRRI+  V
Sbjct: 235 IDPMTLTT-SGVGPDQPVANNATDEGRSRNRRIEFRV 270


>gi|298372894|ref|ZP_06982884.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275798|gb|EFI17349.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 587

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 76/290 (26%), Gaps = 16/290 (5%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
             K I        K           +QN     + + +D    E             T  
Sbjct: 300 KIKNITDKTETAYKTNANGEYTAKLKQNKTYSITASAVDYLDAEPKVIEKDTYVAEKTPS 359

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
            K    ++                         G  +    +      +           
Sbjct: 360 VKHDIYMQKKESAKPTEYTVMGKVMDEDSGKTIGNAVVTVENNTNGTEQNYLTNSFGEYS 419

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---- 236
             + A +         + + S       D               L  +       +    
Sbjct: 420 VALKAYETYTISATAPECLPSEGKKFKKDTYDPSKTSTVENNIYLKRVKKNEAIRLDNVH 479

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D + +   P+    L ++ + L  + ++   +  HTD+         N RLS  RA + 
Sbjct: 480 YDLNKATIRPDARPELDRLVKYLKDNPKIRVEMSSHTDSR---GSDAYNQRLSQQRADAV 536

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMN--SANRRIDILV 338
              L++ G++  RI  + G+   +L       ++        NRR ++ V
Sbjct: 537 KLYLVEKGIAPSRIKSV-GYGETKLLNNCGNGSNCTEEQHQLNRRTEMKV 585


>gi|322418016|ref|YP_004197239.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320124403|gb|ADW11963.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 459

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   P+    + K+ + +       ++  GHTD          N +LS +RA SA
Sbjct: 352 FDTGKADIGPQYKGEMAKVADYMKQYPTTTAVIEGHTDNV---GGYEYNMKLSRERAESA 408

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            + L+ + G+ + R+S   G+ + R    +      + NRRI+ +++
Sbjct: 409 VRYLVDNFGIEKSRLSA-KGYGYTRRVAYNRTAEGRAKNRRINAIID 454


>gi|162454713|ref|YP_001617080.1| hypothetical protein sce6431 [Sorangium cellulosum 'So ce 56']
 gi|161165295|emb|CAN96600.1| Putative outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 293

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 77/236 (32%), Gaps = 18/236 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +Q  + +  E      +   +       L         L ++     +   + +  L 
Sbjct: 47  SQHQTTEGRLAETQKELEAAQAKVAELTKQLEAAGVDIGKLNENLQATSTQVSQLSSTLE 106

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              K       R ++L+ +  +  + L   + +    G+        ++IS+       +
Sbjct: 107 EREKALAEFKARARQLEAIKARFET-LKKKLDELTKLGLAVNIRNNRMVISL---PGDVL 162

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASP-FRNIARDNWRLSLDR 291
           FD        E   +L K+  V+ +          + GHTD  P      RDNW LSL R
Sbjct: 163 FDSGRETLKKEGKEILLKVATVVKNDKSLLQRDYQVAGHTDNKPLVGGQFRDNWGLSLMR 222

Query: 292 AYSAYQVLMK-------SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+         G         +GFA       +D       NRR D++V
Sbjct: 223 AREVLVFLVSPADVKGGGGALPVANWSAAGFADTDPVATNDTDEGRQKNRRCDLIV 278


>gi|190574725|ref|YP_001972570.1| hypothetical protein Smlt2808 [Stenotrophomonas maltophilia K279a]
 gi|190012647|emb|CAQ46275.1| putative OmpA family membrane protein [Stenotrophomonas maltophilia
           K279a]
          Length = 212

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS+     +K+++      + +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLVDGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+ +   LA           + G TD +P R       DNW
Sbjct: 89  GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPVREGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
            LS  R+ +  + L+  GV  D +   + F   +     A++   + NRR++I
Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNANEEGRARNRRVEI 200


>gi|167625617|ref|YP_001675911.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355639|gb|ABZ78252.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 224

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG- 256
            +    + L       GV    +   I++++ +      F    +        VL  +  
Sbjct: 82  YMDVQEAELRKLLQSSGVSVTRSGDNIILNMPNDVT---FGVDQTDLSQRAQQVLNSVVL 138

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
             L +    +++ G+TD+         N RLS  RA      L    V   R++   G  
Sbjct: 139 VALEYDETKLNVMGYTDS---SGAESYNLRLSQVRASEVANYLTNHKVPAQRVAS-HGMG 194

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             +   ++      + NRR++I++
Sbjct: 195 ESKPIASNQTKQGRAENRRVEIIL 218


>gi|325106387|ref|YP_004276041.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324975235|gb|ADY54219.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 666

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 12/130 (9%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278
             T ++I          ++ + +   P +   L  + +++  + ++   +  HTD     
Sbjct: 541 CLTPLVIDKPIVLKDIYYEFNKAELTPMSAQALDILADIMMDNPKITIELSSHTDGI--- 597

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSAN 331
                N  LS  RA S    L+  G+S  +I    G+        +           + N
Sbjct: 598 GSDAYNLDLSQRRAQSCVDYLIAKGISAGKIQA-KGYGKSMPIAPNTINGKDNPEGRALN 656

Query: 332 RRIDILVEDR 341
           RR +  V  +
Sbjct: 657 RRTEFKVIKK 666


>gi|224370138|ref|YP_002604302.1| Pal [Desulfobacterium autotrophicum HRM2]
 gi|223692855|gb|ACN16138.1| Pal [Desulfobacterium autotrophicum HRM2]
          Length = 197

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 16/186 (8%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             K    E      E    P  + +     K++   + + ++ +   S L    + K   
Sbjct: 25  AKKPVVSEPMGAALEGTVDPDAAAKAAALAKQRAMEEAMLREKALKESALKDAELAKQAA 84

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
             +  T   I          F   S+   P +  +L++    L  +   ++ + GH D  
Sbjct: 85  ARSRFTNQNIH---------FAYDSADLTPMSRTLLKEKALWLGENPGVMVVVEGHCDDR 135

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
                   N  L   RA+SA + L   G++E R+S IS +   R      ++   + NRR
Sbjct: 136 ---GTMEYNLALGDRRAFSAKKFLTDLGIAESRLSTIS-YGEERPIDPANNETAWAKNRR 191

Query: 334 IDILVE 339
              +++
Sbjct: 192 AQFVIK 197


>gi|192361426|ref|YP_001981532.1| outer membrane protein [Cellvibrio japonicus Ueda107]
 gi|190687591|gb|ACE85269.1| outer membrane protein [Cellvibrio japonicus Ueda107]
          Length = 154

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   FD        E+  VL    + L  ++  + + GH D          N  L   RA
Sbjct: 51  HVVYFDFDQYALTAESRAVLLAHADKLKGASVAVRLEGHADER---GSREYNMALGEKRA 107

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            +    L+  GVS   + ++  F   +       +   S NRR++I
Sbjct: 108 NAVRDFLVTQGVSGSSL-EVVSFGEEQPVALGHDESAWSQNRRVEI 152


>gi|229588474|ref|YP_002870593.1| hypothetical protein PFLU0931 [Pseudomonas fluorescens SBW25]
 gi|229360340|emb|CAY47197.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 257

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 10/140 (7%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L       GV  +     I + +        F  +S          L  +   L
Sbjct: 90  DQQEKKLRESMANTGVEVQRQGDQIKLIM---PGNITFATNSDAISSSFYQPLNNLANSL 146

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV+   +S   G    
Sbjct: 147 KQFNQNTIQIVGYTDST---GSRQLNMDLSQRRAQSVANYLTSQGVNGANLSA-RGAGPD 202

Query: 319 RLKIASDP--MNSANRRIDI 336
               ++      + NRR+++
Sbjct: 203 NPIASNADVNGRAQNRRVEV 222


>gi|222869877|gb|EEF07008.1| predicted protein [Populus trichocarpa]
          Length = 219

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   FD + S        +L +  E L ++    + I GHTD++        N  LS
Sbjct: 81  DIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 137

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LDRA S    L   GVS  RI    G   H+   ++D     + NRR++I V
Sbjct: 138 LDRANSTRNYLTMRGVSGARI-ATEGRGSHQPVASNDSASGRAMNRRVEIFV 188


>gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 674

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 76/289 (26%), Gaps = 12/289 (4%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
                    +      L   ++   D+       +   I             D     ++
Sbjct: 389 SKYDDFSLSYYSDNNGLYATNRNGTDDDIYSFVQTGEIITREFKTQFEIRDADTDELISD 448

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
              +    +    Y    + +   +  LT D         + +  +   +       P  
Sbjct: 449 AAIKILGYQGKEVYADRKEDAAPFQVPLTVDDYTFIASGDNHEEGRMDIQIRGIQTAPYV 508

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFD 238
            +        +      K +S  L                 +       +        FD
Sbjct: 509 IKVKRIFTDSELALMKEKNLSKDLKEKDPSRFELLTDVNAPQVVEKEGKLFMDVAPIYFD 568

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
               +   ++  VL ++   L     +   I  HTD+      A  N  LS  RA S + 
Sbjct: 569 FDLHVVREDSQAVLDRLAAKLTKYKRIKIKISSHTDSR---GPAAYNMPLSEKRAKSTFD 625

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVED 340
            L+  G+   RI +  G+   +  I       ++  +  NRR +  +  
Sbjct: 626 YLVSKGIDASRI-QYQGYGDTKPVINCPVGKCTEDDHQLNRRSEFEITG 673


>gi|186894908|ref|YP_001872020.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|186697934|gb|ACC88563.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 581

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 446 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 502

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 503 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 552


>gi|124005068|ref|ZP_01689910.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
 gi|123989320|gb|EAY28881.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
          Length = 680

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
            +       I   D+     +F   S    P  I  L  I   L   TE++  I GHTD 
Sbjct: 551 VKEDIPLTKIKPGDKLGLQVLFGFDSYQIQPRYISHLDSIANYLKEYTEMVVEISGHTDN 610

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSAN 331
                    N  L+  R+ +    L+ K G+   ++    G+A  +    +      + N
Sbjct: 611 I---GNRWYNNLLAKRRSQAVINYLINKKGIPAAQVV-FKGYADSKPLGTNTTVTGRALN 666

Query: 332 RRID-ILVE 339
           RR+D I+++
Sbjct: 667 RRVDGIVIK 675


>gi|108810029|ref|YP_653945.1| putative lipoprotein [Yersinia pestis Antiqua]
 gi|108810484|ref|YP_646251.1| lipoprotein [Yersinia pestis Nepal516]
 gi|145600441|ref|YP_001164517.1| lipoprotein [Yersinia pestis Pestoides F]
 gi|165927314|ref|ZP_02223146.1| ompA family protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936533|ref|ZP_02225101.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009010|ref|ZP_02229908.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212007|ref|ZP_02238042.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167418991|ref|ZP_02310744.1| ompA family protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426023|ref|ZP_02317776.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|270487963|ref|ZP_06205037.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294502545|ref|YP_003566607.1| lipoprotein [Yersinia pestis Z176003]
 gi|108774132|gb|ABG16651.1| lipoprotein [Yersinia pestis Nepal516]
 gi|108781942|gb|ABG16000.1| putative lipoprotein [Yersinia pestis Antiqua]
 gi|145212137|gb|ABP41544.1| lipoprotein [Yersinia pestis Pestoides F]
 gi|165915649|gb|EDR34258.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920776|gb|EDR38024.1| ompA family protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992349|gb|EDR44650.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206753|gb|EDR51233.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962985|gb|EDR59006.1| ompA family protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167054946|gb|EDR64746.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|270336467|gb|EFA47244.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294353004|gb|ADE63345.1| lipoprotein [Yersinia pestis Z176003]
          Length = 165

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD        E +  +QKIG +L+    + + + GHTD+         N +LS  R
Sbjct: 58  NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+ +  I  + G         +      + NRR+ I++   
Sbjct: 115 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 165


>gi|33600833|ref|NP_888393.1| putative lipoprotein [Bordetella bronchiseptica RB50]
 gi|33568433|emb|CAE32345.1| putative lipoprotein [Bordetella bronchiseptica RB50]
          Length = 200

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270
            +GV     +  + I+++      +FD   +  L      LQ I +++    T +++I G
Sbjct: 69  HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEG 125

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--------I 322
           HTD+   +     N  LSL RA +  Q L   GV   ++  + G    R           
Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPNQLANGA 181

Query: 323 ASDPMNSANRRIDILVEDR 341
            +    + NRR++ ++ +R
Sbjct: 182 DNPQGRAQNRRVEFVLPNR 200


>gi|323698024|ref|ZP_08109936.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. ND132]
 gi|323457956|gb|EGB13821.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
           ND132]
          Length = 184

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     E+  +L +   +L    +V  +  GH D          N  L   RA +A
Sbjct: 83  FAFNSYELSDESRSILAQKATILRKFADVNVVIEGHCDER---GTEEYNLALGERRARAA 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           Y+ L+  GV  +R+  +S +          ++   + NRR + +++
Sbjct: 140 YEHLVILGVEPERMKIVS-YGEEYPVDPGHNETAWAKNRRDEFVIK 184


>gi|157373855|ref|YP_001472455.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157316229|gb|ABV35327.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 226

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +  + L       GV    +   I++++    N   F    +        VL  +  
Sbjct: 84  YMDTQEAELRKQLQSTGVSVTRSGDNIVLNM---PNEVTFGVDQTDLSSGAKRVLNSVAL 140

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +   ++ G+TD+         N RLS  RA      L+   +   R+    G  
Sbjct: 141 VAKEYDQTQLNVLGYTDS---SGAESYNLRLSKIRAIEVGNYLVAQKIEYGRVKS-EGLG 196

Query: 317 HHRLKIASDPM--NSANRRIDILVED-RQG 343
             R    +      + NRR++I++    QG
Sbjct: 197 ESRPIATNATAEGRAQNRRVEIVLSPLPQG 226


>gi|254475344|ref|ZP_05088730.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214029587|gb|EEB70422.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 208

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 4/105 (3%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D   T  F   S+    E   +L +    +    E    + GHTDA         N  L 
Sbjct: 58  DVPTTINFAFDSAQLDAEARAILDQQAHWIRQFPEVRFRVYGHTDAV---GSNSYNKTLG 114

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           L RA +A   L+  G+S  R+  +  F   +  I +      NRR
Sbjct: 115 LRRARAAVSYLVSRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 159


>gi|167839895|ref|ZP_02466579.1| hypothetical protein Bpse38_24699 [Burkholderia thailandensis
           MSMB43]
          Length = 215

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +++++      K +   L+G +A            R  ++   I    + +
Sbjct: 43  ELSSKLDAEVRQRQLESQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P    +L+ +   LA       E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRTGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +    +  D   + NRR++I
Sbjct: 153 KRALTVTRAFIDEGVPAASVFAAA-FGSEQPVSPNSDDAGRAKNRRVEI 200


>gi|148264196|ref|YP_001230902.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146397696|gb|ABQ26329.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 520

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 15/270 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K +    +  +  ++ +  +   + I   S+           + +   +        +  
Sbjct: 257 KAVPKLASENDEKNKKQEIVKPVKIIPITSLIKTAVPIVPASKLEIPVDPDKEEIVIKPY 316

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA--KK 198
                     S          + +    + E    P       L    +  L+ +     
Sbjct: 317 GQITIPSQPVSTPVVMPLLPREAKVIQLESEIPVEPKAEIATELNPVAESSLEGVTPLYG 376

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I      +   N     + +           D     MF+        E    L ++ E 
Sbjct: 377 IEVKGDNIEVSNAKPTQISQKMSVYRKFRFPD----IMFEFGQIELSNEVKKALSEVAEQ 432

Query: 259 LAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315
                  +   I GHTD+         N  LS+ RA +    L +K G+   R+  + G 
Sbjct: 433 ARTDKTWLYLRIDGHTDSIGSVG---YNMDLSIKRAIAIASYLIIKEGIDPTRVF-VKGM 488

Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQG 343
              +L   +   +    NRR ++L    +G
Sbjct: 489 GKSKLIADNSTTDGRRMNRRFEVLFLVPKG 518


>gi|1000844|gb|AAA78948.1| 18.5 kDa protein [Bartonella bacilliformis]
          Length = 171

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 10/117 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS+   +   +L +  E L         I GH D          N  L   R
Sbjct: 31  DRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDR---GTREYNLALGQRR 87

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED---RQG 343
           A +    L+  GVS  R+  +S +   R           + NRR+ I +     R+G
Sbjct: 88  AIAVRDYLVSLGVSPQRMKTMS-YGKERPVAVCDDISCWNQNRRVVISITSGAVRKG 143


>gi|229894342|ref|ZP_04509525.1| Outer membrane protein [Yersinia pestis Pestoides A]
 gi|229703740|gb|EEO90756.1| Outer membrane protein [Yersinia pestis Pestoides A]
          Length = 327

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 192 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 248

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 249 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 298


>gi|134292200|ref|YP_001115936.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134135357|gb|ABO56471.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 224

 Score = 89.6 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       T   +++ G+TD+         N  LS  R
Sbjct: 118 GDALFATGQATLTPAARASLDKLLSEREDHTYTEVTVTGYTDS---AGSDAANLALSKRR 174

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A    + L   G+    +  ++G        ++        NRR++I ++ 
Sbjct: 175 ADVVARYLHAHGLKAHTM-AVAGRGSADPVGSNATAEGRAANRRVEISLKR 224


>gi|78189006|ref|YP_379344.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Chlorobium chlorochromatii CaD3]
 gi|78171205|gb|ABB28301.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Chlorobium chlorochromatii
           CaD3]
          Length = 183

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 7/107 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S         L++    +       I I GH D          N  L   RA
Sbjct: 79  DVFFDFNKSELGTTRNEQLKRNANWIKAHPTSNIIIEGHCDER---GTNEYNIALGERRA 135

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            SA   ++  GV   R++ +S +   +     +++   + NRR+  +
Sbjct: 136 NSAKDYMVTLGVDPARLTTVS-YGEEKPVAIGSTEEAWAQNRRVHFI 181


>gi|99082187|ref|YP_614341.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99038467|gb|ABF65079.1| OmpA family protein [Ruegeria sp. TM1040]
          Length = 207

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+    E   VL    + +    E    + GHTDA         N RL L RA +A
Sbjct: 66  FDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDAV---GSQTYNKRLGLRRARAA 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  ++ F   +  I +D     NRR
Sbjct: 123 VNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR 160


>gi|238794810|ref|ZP_04638412.1| OmpA family protein [Yersinia intermedia ATCC 29909]
 gi|238725890|gb|EEQ17442.1| OmpA family protein [Yersinia intermedia ATCC 29909]
          Length = 169

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD       P  +  +QKIG  LA+     + + GHTD+         N +LSL+R
Sbjct: 62  NKVLFDSDVRELNPSGVQRVQKIGRALANVGIHHMRVDGHTDSI---GEDGYNQQLSLER 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+    I  + G         +      + NRR+ ++V   
Sbjct: 119 ASAVADALATIGIPRANID-VRGRGKLEPVADNHTPKGRAENRRVSMIVTAP 169


>gi|237753154|ref|ZP_04583634.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375421|gb|EEO25512.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 466

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +SS   P       +I +      + I I GHTD +     +  N +LS  RA +  
Sbjct: 121 FKSASSTLNPNAKDYYTQIAKTYQVKDKKILIVGHTDDT---GNSAFNQKLSEKRARAVG 177

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           +V  ++GVS   I    G    + K  ++     + NRR++I+
Sbjct: 178 KVFAQNGVSTKNIY-YQGAGSTQPKADNNTEKGRAENRRVEII 219


>gi|186893942|ref|YP_001871054.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|186696968|gb|ACC87597.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 168

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD        E +  +QKIG +L+    + + + GHTD+         N +LS  R
Sbjct: 61  NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+ +  I  + G         +      + NRR+ I++   
Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168


>gi|114048845|ref|YP_739395.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113890287|gb|ABI44338.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 230

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV        I++++    N   F    +        VL  +  
Sbjct: 89  YMDVQETKLREQLASTGVSVTRDGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  GV+  R+    G  
Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201

Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339
                 +  +    + NRR++I++ 
Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226


>gi|149909537|ref|ZP_01898191.1| outer membrane protein [Moritella sp. PE36]
 gi|149807442|gb|EDM67393.1| outer membrane protein [Moritella sp. PE36]
          Length = 211

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD  ++    ++  VL  I ++L  +   + + GH D +     A  N+ L L R+ 
Sbjct: 110 RVYFDFDNAHLTDKSKYVLDTIMQLLKLNNNNLVVEGHADTT---GTADYNFSLGLKRSR 166

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  Q L + GV + R+   S          +D       NRR++I
Sbjct: 167 SVAQYLKQLGVEKGRLEATS-VGDTMPISDNDTEAGRQLNRRVEI 210


>gi|21111774|gb|AAM40073.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575109|gb|AAY50519.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 431

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283
           +I++ D+    +FD   +   P+   VL  +   L   +   + +RGHTDA   +     
Sbjct: 316 VITLSDR---ILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 369

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336
           N  LS  RA +    L   G ++   +   G+   +    +      +P     NRR+++
Sbjct: 370 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427

Query: 337 LVE 339
            + 
Sbjct: 428 FLR 430


>gi|88810227|ref|ZP_01125484.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
 gi|88791857|gb|EAR22967.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
          Length = 263

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 73/210 (34%), Gaps = 9/210 (4%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
             +S Q+     +  ++  + + L  +      I + E      + + + +  +R     
Sbjct: 57  AQDSLQAAQTAWTEEQNQARAEHLAYTAQRHAEIAQAEAAKQAAIVQSQQIMKQRDTLRL 116

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
               ++  T    +     +    +  +T   I +    +  +F   S+         L 
Sbjct: 117 QSRSQLVETQQRQIEVLREQLAELKPKQTEQGIML--TLSHVLFAFDSARLQSAAQAPLD 174

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           K+   L    ++   I G+TD++     A  N RLS  RA S    + + GV    + ++
Sbjct: 175 KLATYLRERPQIQVKIVGYTDST---GAANYNQRLSKRRAQSVADAMAQRGVERASM-RV 230

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVED 340
            G        ++        NRR++  + +
Sbjct: 231 VGRGESNPVASNATEQGRQLNRRVEFTLLN 260


>gi|110638113|ref|YP_678322.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280794|gb|ABG58980.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 631

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F  +S     ++I  L+K+   +  +  + + + G+TD       A  N +LS  R
Sbjct: 526 NNIFFQTNSYQLEEKSISELKKLINFIQINPAQRVELAGYTDNV---GTAEANLKLSAMR 582

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A + Y  L++ G+    I    G+        ++       NRR++I + 
Sbjct: 583 AKAVYDYLIQHGIKPAGI-TYKGYGAASPVADNNSEEGRQKNRRLEIKIL 631


>gi|299069861|emb|CBJ41142.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
           solanacearum CMR15]
          Length = 215

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS      +++++      K +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSSRLENEVEQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE + +L+     +   L    E++ + G  D            DNW
Sbjct: 89  GSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  RA +  + L+ +G+    +   + F   +   ++  D   + NRR++I
Sbjct: 149 ELSAKRALTVTRTLIDAGIPGASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 200


>gi|4580965|gb|AAD24552.1|AF117960_1 OprF [Pseudomonas agarici]
          Length = 322

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  G+TD          N +LS  RA++ 
Sbjct: 221 FDFDKSVVKPNSYADIKNLADFMKQYPQTSTVVKGYTDNV---GTDAYNQKLSERRAHAV 277

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
            QVL    GV + R+S + G+  +    ++        NRR++
Sbjct: 278 AQVLTNQYGVEQSRVSSL-GYGKNNPAASNATKEGQAINRRVE 319


>gi|294672984|ref|YP_003573600.1| OmpA family protein [Prevotella ruminicola 23]
 gi|294473810|gb|ADE83199.1| OmpA family protein [Prevotella ruminicola 23]
          Length = 374

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +F+   +   PE++  +QK+ + +  +      ++GHTD        + N  LS  R
Sbjct: 269 NNILFETGKATLKPESMEEIQKVADYMKKNPSVRFEVQGHTDNQ---GSDKINDPLSQQR 325

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
           A +  + L + G  E  +  + G   H     +  D   + NRR++ +
Sbjct: 326 AEAVVKALAQLGCDEFNLRAV-GKGSHEPVADNKTDAGRAQNRRVEFI 372


>gi|23013938|ref|ZP_00053784.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 218

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 16/178 (8%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             + +     +  ++    L    S  L  +    +   V       GI++++    +  
Sbjct: 45  EQVQQGMAKDIGLRETKTPLQDLRSEMLGQVTGAGVEDTVDVGRDDKGIVLNL---ASGT 101

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWRLSLDR 291
           MF   S+   PE + ++++I   L         I I+GHTD +P R      NW LS  R
Sbjct: 102 MFKPGSAEVRPEILPLMKEISATLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAAR 161

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM------NSANRRIDILVEDR 341
           A S  +V+ + G+  +R+  ++  A    ++ +  D         + NRR++I +  R
Sbjct: 162 ALSTLKVMNELGIPTNRMK-LAALADTAPRVPNRSDTGKAYPENQAINRRVEIHIYPR 218



 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 54/156 (34%), Gaps = 10/156 (6%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF---------NPFG 73
             +       W + YAD +T+LMAFF+V+  ++  D +  + ++Q               
Sbjct: 5   HKENKEAAEDWLLSYADMITLLMAFFIVLVSMSKIDKNKYEQVQQGMAKDIGLRETKTPL 64

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
           ++L +   G        +     + D  I  ++   ++  K GS   + +   L   I  
Sbjct: 65  QDLRSEMLGQVTGAGVEDTVDVGRDDKGIVLNLASGTM-FKPGSAEVRPEILPLMKEISA 123

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
               ++  + +  +   ++              ++ 
Sbjct: 124 TLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSA 159


>gi|157737365|ref|YP_001490048.1| hypothetical protein Abu_1119 [Arcobacter butzleri RM4018]
 gi|157699219|gb|ABV67379.1| hypothetical outer membrane protein [Arcobacter butzleri RM4018]
          Length = 854

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
            +F+ +S++   ET   +      L  + E  +I  GH    P    A  N +LS  RA 
Sbjct: 747 VLFENNSAVIKEETKGKVLSFARYLLDNKEFNTIIEGHASKDPTA-SAAHNQKLSEQRAA 805

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +   +L+ +GV   RI  I G  H+     +        NRRID ++  +
Sbjct: 806 AIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRIDAILIRK 854


>gi|126664143|ref|ZP_01735136.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
 gi|126623857|gb|EAZ94552.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
          Length = 621

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 16/260 (6%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           N  E  + +K D +   + TK               ++             +     N +
Sbjct: 372 NVGEPVNTSKDDFAFTYNTTKKVGFFSSNRDGNDDIFKADPICKVQALVRVKDAKTGNVI 431

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GL 206
              +    D  ++T   +S           L      A   K+  +    +++   +  +
Sbjct: 432 EGATVMLVDEKQTTITNQSTASNGETLSGVLCNTAYSAQVSKQGYESGVFEVAKAENDQV 491

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           V + ++  ++   T   +++          F+   S    +    L K+  V+  +  +I
Sbjct: 492 VVEALLNPIMPIITEKEVILQ------PIYFEYDKSNITADGAAELNKLIIVMNENPNMI 545

Query: 267 SIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-- 323
                HTD+       + N +LS  RA +  Q L+  G++++RI    GF     K+A  
Sbjct: 546 IFAKSHTDSR---GSDKYNMKLSDRRAKATVQYLLSKGIAKERI-SGQGFGESEPKVACK 601

Query: 324 --SDPMNSANRRIDILVEDR 341
             ++  ++ NRR + L+  +
Sbjct: 602 SCTEEEHAQNRRSEFLIVKK 621


>gi|51594942|ref|YP_069133.1| OmpA/OmpF family outer membrane porin [Yersinia pseudotuberculosis
           IP 32953]
 gi|51588224|emb|CAH19831.1| putative OmpA/OmpF family outer membrane porin [Yersinia
           pseudotuberculosis IP 32953]
          Length = 168

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD        E +  +QKIG +L+    + + + GHTD+         N +LS  R
Sbjct: 61  NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+ +  I  + G         +      + NRR+ I++   
Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168


>gi|218960421|ref|YP_001740196.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729078|emb|CAO79989.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 781

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S++   E+  +L +I   +L + T  + I GHT  +      + N  LS +RA + 
Sbjct: 678 FDYDSAVLKAESYPILNEIALTLLNNPTIRVEISGHTCENQ--GGEKYNTTLSENRAAAV 735

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
              L   GV+ +R+  + G+   R    +      + NRR+++ +
Sbjct: 736 LSYLKGKGVNANRMISV-GYGLSRPLNNNLSEEDKALNRRVEVKI 779


>gi|91785192|ref|YP_560398.1| OmpA family outer membrane protein [Burkholderia xenovorans LB400]
 gi|91689146|gb|ABE32346.1| outer membrane protein, OmpA family [Burkholderia xenovorans LB400]
          Length = 267

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +    F   S++  P     L              + + G+TDA+        N  LS  
Sbjct: 159 QGNANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDAT---GSEAHNLNLSQA 215

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RA +  Q L   G+  ++     G        ++        NRR+D+ V  
Sbjct: 216 RAAAVVQYLRDGGLRAEQFVA-RGLGSADPVASNATAEGRMQNRRVDVRVLA 266


>gi|323357271|ref|YP_004223667.1| outer membrane protein [Microbacterium testaceum StLB037]
 gi|323273642|dbj|BAJ73787.1| outer membrane protein [Microbacterium testaceum StLB037]
          Length = 165

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 13/114 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD  S+   P+   VL  +  +L   +    ++ GHTDA        +N  LS  R
Sbjct: 52  DAVLFDFDSAEIRPDAAGVLDSLAALLTQGAVPAATVSGHTDAI---GTDAENQVLSERR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338
           A +    L + G   D      G+   R   A++            NRR++ILV
Sbjct: 109 AQAVVDALRRRGTQTD--WTAEGYGESRPVAANELDGVDNPAGRQLNRRVEILV 160


>gi|281420329|ref|ZP_06251328.1| lipoprotein PG3 [Prevotella copri DSM 18205]
 gi|281405631|gb|EFB36311.1| lipoprotein PG3 [Prevotella copri DSM 18205]
          Length = 248

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 7/143 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              +  V +  V+ V      + + ++     +  +F  + S         L +   VL 
Sbjct: 100 KAEAEQVKNAQVETVTDANGLSAVKVTF---ASGILFPTNGSTLSSSAKTDLAQFAGVLK 156

Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           ++T+  +SI+G+TDA+        N  LS  RA + Y  L   GV+  ++  + GF    
Sbjct: 157 NNTDCEVSIQGYTDAT---GNDGINLPLSQKRAEAVYNYLASCGVTSRQVKNVQGFGSAN 213

Query: 320 LKIASDPMNSANRRIDILVEDRQ 342
             + +    + NRR+++ +   Q
Sbjct: 214 PVVNTTAACAQNRRVEVYMYASQ 236


>gi|298529291|ref|ZP_07016694.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510727|gb|EFI34630.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 359

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+    E   +L +    +   T+  + + GHT           N  LS  RA S 
Sbjct: 258 FDFDSAAIKDEYAEILNEAARQIQDRTDPHVVVEGHTCNI---GPEDYNMELSQRRADSV 314

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L++ GV ED I         R +  +D       NRR+++ +E
Sbjct: 315 ADYLVEQGVDEDAIDT-EAHGLTRPEFDNDTREGRQLNRRVEMRLE 359


>gi|209965094|ref|YP_002298009.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
 gi|209958560|gb|ACI99196.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
          Length = 163

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F        PE    L +    L       +++ GH D          N  L   R
Sbjct: 58  DRVFFGFDRFDLTPEATATLDRQAAWLKQYPNVTVTVEGHADER---GTREYNLALGERR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L   GV   R+  IS +   R  +  + +   + NRR
Sbjct: 115 ATAVKNYLTALGVDTARVQTIS-YGKERPAVLGSDESAWAQNRR 157


>gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 359

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 30/297 (10%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLM-----TASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           N  D D  +    Y  P   N+       A  G  D  N     +         ++   +
Sbjct: 83  NNVDVDQYRLDGLYHLPTISNVNLTPYLAAGVGTTDFSNASGHDNVQVNAGGGLKYALND 142

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           +V L+              +N+  L           + T + +    + +++  +     
Sbjct: 143 TVSLRADFRLVNDVEDHHLDNVTSLGVQMTFGGSSRNSTSNDDDYTPVEQTSYTQVEPAA 202

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           +      P       A + ++     +     T                     I I   
Sbjct: 203 QPQQATQPEVISSEPAEQVQEEPITASPMAEETTQQPEI--------VAEPPGKINIQ-- 252

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
                  F  + +    +    ++KI   L  +    + I GHTD       A  N +LS
Sbjct: 253 -------FGLNKTNVEQKFYPEIEKIAIFLKENPGSTVMIEGHTDN---SGAASYNQKLS 302

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             RA +  +VL  +  +S  R+  I G+   R  + +D       NRR+  ++   +
Sbjct: 303 EKRAKAIAEVLTNTFEISATRVEAI-GYGEERPFVENDTEAHREANRRVVAIISTSE 358


>gi|269964125|ref|ZP_06178424.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831140|gb|EEZ85300.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 197

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
           S  + +   +F   SS   P     +  + + L       I ++G+T           N 
Sbjct: 67  SSQEMQIRVLFANDSSEIDPVFAKQISDLSDFLKEYPTTSIELQGYTS---ITGTDEYNL 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            LS  RA S  Q L+ +G+S DR+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 124 ALSKRRAESVRQELINNGISPDRL-RIVGFGETNLASTGTDETSHALNRRVTATVVGYKG 182


>gi|153833086|ref|ZP_01985753.1| outer membrane protein [Vibrio harveyi HY01]
 gi|148870654|gb|EDL69561.1| outer membrane protein [Vibrio harveyi HY01]
          Length = 208

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   SS   P  +  +  + + L       I ++G+T           N  LS  RA
Sbjct: 85  RVLFANDSSAIDPVFVNQISDLSDFLKEYPTTSIELQGYTS---ITGTDEYNLALSKRRA 141

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            S  Q L+ +G+S +R+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 142 ESVRQELINNGISPERL-RIVGFGETNLASQGTDETSHALNRRVTATVVGYKG 193


>gi|329945590|ref|ZP_08293324.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528682|gb|EGF55644.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 321

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 9/181 (4%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
                 E   +    K    A K  + + D               ++        T   +
Sbjct: 114 PESGLFEGVPVVRDGKLSEDAKKALEDVYDTESTPDPVALETFTASVDGASDTRVTGKSV 173

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            I++       +FD  S+    +    L+K  + L+      ++I GHTD          
Sbjct: 174 TITLASD---VLFDSDSADLSAQADTTLKKAADQLSTYPGGQVTIVGHTDDV---ADDAH 227

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           N  LS  RA +    L +          +SG      ++ +D       NRR++I +   
Sbjct: 228 NQDLSQRRAQAVSDRLGQLASMSAYSVSVSGKGESEPRVPNDSDENRQLNRRVEITLVPT 287

Query: 342 Q 342
           Q
Sbjct: 288 Q 288


>gi|158422035|ref|YP_001523327.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
 gi|158328924|dbj|BAF86409.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
          Length = 381

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 10/237 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
             N   L++    +        + IF  ++        N    D +    +  + D ++ 
Sbjct: 147 PPNRTSLEVLENYRTALQAAGASEIFTCAHRACGGRDFNIAQVDPQNYTRMGDNYDDQRY 206

Query: 167 INKEENYFLPPLSKEK--ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +          +        +       +D        +     D  +  V        I
Sbjct: 207 LAARLQAPGKDVYVALFITRSQSGAAADKDRIFTQLHVIEVKSMDANMVVVDASRMADSI 266

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
             +        +FD +S++  PE+   L +I  +L  + +  + + GHTD          
Sbjct: 267 GKTGSVALYGILFDFNSAVIKPESKATLDEIASLLRKAPDLKLVVVGHTDNV---GGMDS 323

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
           N +LS  RA +  + L++   ++  R+    G        ++  D   + NRR++++
Sbjct: 324 NMKLSQARAEAVRRALVEQYAIAAARLQAW-GAGFMAPVASNRTDEGRAKNRRVELV 379


>gi|90412166|ref|ZP_01220172.1| Conserved hypothetical outer membrane protein [Photobacterium
           profundum 3TCK]
 gi|90326890|gb|EAS43275.1| Conserved hypothetical outer membrane protein [Photobacterium
           profundum 3TCK]
          Length = 220

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 6/144 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           A  ++      +     + +              +      F   S    PE+  VL+ I
Sbjct: 80  AALLALITETNIGSQCWEYLNTAGLLNTTRTQDKNLIARVYFAFDSQHLTPESQTVLKTI 139

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            + L +S + +++ GHTD+         N+ L L RA S+ Q L+ + V +  +   + +
Sbjct: 140 AQKLKNSPQTVTLNGHTDSV---GPQGYNYTLGLQRAKSSMQYLIDNEVKDTNLKSKT-Y 195

Query: 316 AHHRLKIASDP--MNSANRRIDIL 337
              +   ++      + NRR+D++
Sbjct: 196 GETQPIESNTTSQGRAMNRRVDVV 219


>gi|89068018|ref|ZP_01155435.1| OmpA family protein [Oceanicola granulosus HTCC2516]
 gi|89046257|gb|EAR52314.1| OmpA family protein [Oceanicola granulosus HTCC2516]
          Length = 218

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 7/146 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPMFDKSSSIPLPETI 249
             +  +  ++S       +NI            +     D+  +   F   S+   PE  
Sbjct: 26  DAEAGSTYLASDFGAATVNNIAVQADGTNYVLILAQRFADEVPSMVNFAFDSANLGPEAR 85

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L      +    E   S+ GHTD          N RL   RA +    L   GVS DR
Sbjct: 86  AILDVQASWINQFPELRFSVYGHTD---LVGSDAYNRRLGERRARAVVAYLASRGVSTDR 142

Query: 309 ISKISGFAHHRLKI-ASDPMNSANRR 333
           +  +  F   +  +   DP  + NRR
Sbjct: 143 LEALVSFGETQPLVLTQDPERA-NRR 167


>gi|255319440|ref|ZP_05360655.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
           SK82]
 gi|262379403|ref|ZP_06072559.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
           SH164]
 gi|255303508|gb|EET82710.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
           SK82]
 gi|262298860|gb|EEY86773.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
           SH164]
          Length = 190

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA 
Sbjct: 80  VYFDYDSSDLSNEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAK 136

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           +    L+ +GV+ +++  +S +             +   NRR++I
Sbjct: 137 AVQSYLVTNGVNPNQLEAVS-YGKEMPINPGHDEAAWKENRRVEI 180


>gi|162452165|ref|YP_001614532.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161162747|emb|CAN94052.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 467

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 87/296 (29%), Gaps = 10/296 (3%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
              +        A      P         +        P R    +   + +  +     
Sbjct: 176 LAPSIAATAPFVAAPARERPHDAVSSAPPRTAAYSTPHPSREGPPRQRQTREWLLPTLLA 235

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
              +G      + +RL+      ++                      ++   +    + E
Sbjct: 236 AAVLGGLWAFVRERRLDRTAAAPTHEAPVAAAPREDLAQPVAPPPQPEAPPPQPEAPRAE 295

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIID 230
                  S+    A +  ++L+  A +++      L  D                     
Sbjct: 296 APTAAAPSEAPPNAPEVVEQLRITAGEMTLPGGKVLSVDEHSSEAEIARYLDAGAAEGPR 355

Query: 231 QRNT--PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
           + +     F   ++     +   L+ + ++L       + I GHTDA      A  N  L
Sbjct: 356 RFSMEGINFQFGTTELTEASRPKLEALADILDAYPTARVRIEGHTDAV---GGAEGNRSL 412

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           SL RA      L    ++ DRI +++G   ++    +D     + NRRID+ V  R
Sbjct: 413 SLARAQEVRNELTARQIAPDRI-EVAGMGANQPVAPNDTAGGRAQNRRIDVTVLSR 467


>gi|192360671|ref|YP_001983282.1| OmpA family protein [Cellvibrio japonicus Ueda107]
 gi|190686836|gb|ACE84514.1| OmpA family protein [Cellvibrio japonicus Ueda107]
          Length = 217

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +       +    A         +   +    + L A+    GV        + + +   
Sbjct: 51  DNAKDRRERALKGAAIGGVIGGGVGNYMDRQEAKLRAELQGTGVQVRREGNNLYLIM--- 107

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
                F  SS+    +   VL  + +V+A   +  I + GHTD++        N  LS  
Sbjct: 108 PGNITFATSSADIRSDFFPVLNSVAKVVAEFNQTSIRVTGHTDST---GSDSINQPLSER 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           RA S    L    V+  RI    G+       ++D       NRR+++ +   +
Sbjct: 165 RADSVAMYLRSQKVASARIQAY-GYGSRYPVASNDTPTGREQNRRVELELIPNE 217


>gi|330899613|gb|EGH31032.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 133

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
                F   SS         L  +   L   +   I I G+TD++      + N  LS  
Sbjct: 20  PGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDST---GSRQHNMDLSQQ 76

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           RA S    L   GV +  +  + G    +   ++      + NRR+++ ++   G
Sbjct: 77  RAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPIPG 130


>gi|253998106|ref|YP_003050169.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
 gi|253984785|gb|ACT49642.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
          Length = 170

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD + ++    +   +QK+ + L     + + I GH DA+        N  LS  R
Sbjct: 63  DKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLDKMRIEGHADAT---GRESYNVELSEQR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A++     ++SG+ +  I  + G        ++      + NRR+ I+V   
Sbjct: 120 AWAVADAFIQSGMPKSGII-VRGMGSQSPVASNATVAGRAENRRVSIIVVTD 170


>gi|254525016|ref|ZP_05137071.1| OmpA family protein [Stenotrophomonas sp. SKA14]
 gi|219722607|gb|EED41132.1| OmpA family protein [Stenotrophomonas sp. SKA14]
          Length = 212

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS+     +K+++      + +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLIDGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+ +   LA           + G TD +P R       DNW
Sbjct: 89  GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPVREGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            LS  R+ +  + L+  GV  D +   + F   +   ++      + NRR++I
Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNASEDGRARNRRVEI 200


>gi|315124911|ref|YP_004066915.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315018633|gb|ADT66726.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 319

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L K GV + RI  + G+     + ++D       NRR+D
Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNSRSSNDTKEGRADNRRVD 313


>gi|254506333|ref|ZP_05118476.1| outer membrane protein [Vibrio parahaemolyticus 16]
 gi|219550813|gb|EED27795.1| outer membrane protein [Vibrio parahaemolyticus 16]
          Length = 225

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +Q+          +S     +  +           +       +  I A         
Sbjct: 21  QATQRQNATTGESETNSATSGAIIGAIAGAAIGVATGDDAKDRRKRALIGAAGGAAVGGG 80

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  E      L  ++   N   F  SS          L+ 
Sbjct: 81  VGYYFDQQEAALRQELLNSGVQVERVGENQL--LLRLENGIGFSSSSYQLDSSIHNTLRG 138

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     
Sbjct: 139 VARILVEYPDTSLVIEGHTDST---GSDTTNQILSERRAESVRSYLVSQGVAAGRAIA-R 194

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339
           G         +        NRR++I + 
Sbjct: 195 GNGERYPLCTNSTAEGRACNRRVEIQIL 222


>gi|212633550|ref|YP_002310075.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212555034|gb|ACJ27488.1| OmpA [Shewanella piezotolerans WP3]
          Length = 222

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG- 256
            +    + L       GV    +   I++++ +      F    +        VL  +  
Sbjct: 82  YMDVQEAELRKQLQSSGVSVTRSGDTIILNMPNDVT---FGVDQTDLSQRAKQVLNSVAL 138

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
             L +    +++ GHTD+      A  N RLS  RA      LM   V   R+    G  
Sbjct: 139 VALEYDETKLNVMGHTDS---SGAASYNMRLSQVRASEVASYLMSRKVPSARVVS-HGVG 194

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             R   +++     + NRR++I++
Sbjct: 195 EDRPVASNETKAGRAENRRVEIIL 218


>gi|156974655|ref|YP_001445562.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
 gi|156526249|gb|ABU71335.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
          Length = 208

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   SS   P  +  +  +   L       I ++G+T           N  LS  RA
Sbjct: 85  RVLFANDSSAIEPVFVNQISDLSNFLKEYPTTSIELQGYTS---ITGTDEYNLALSKRRA 141

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            S  Q L+ +G+S +R+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 142 ESVRQELINNGISPERL-RIVGFGETNLASQGTDETSHALNRRVTATVVGYKG 193


>gi|152995997|ref|YP_001340832.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150836921|gb|ABR70897.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 311

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 14/251 (5%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
           Q    L     +  N  +  + +  + +  + L  ++ +++ S+       + +R     
Sbjct: 44  QGDSQLIQLAPLEFNEAEQAVKTAEEPRTDEMLGRHLMFVAYSKVEIAENRAKSR----M 99

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
             L +    ++            L   +  AM+ K   + L   + +      +    + 
Sbjct: 100 LVLERKQLSQQRNEATLAARNRELGVARNDAMQSKADAEKLR--MEANAERNRSQEFQRQ 157

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273
           +     +      I+       F    +   P  ++ L K+   L    +   +  G+TD
Sbjct: 158 LGMLNAKATNRGMIM-TLGDLSFATGKAKLQPSVLIDLDKLVVFLNKYADRSIVIEGNTD 216

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331
           +         N RLS  RA +    L+  G++  R+  +           +D       N
Sbjct: 217 SV---GSEALNLRLSQHRASAVRDYLVGKGINSARL-TVVANGEGNPLDTNDSKLGRQHN 272

Query: 332 RRIDILVEDRQ 342
           RR+DI++ + +
Sbjct: 273 RRVDIVISNTE 283


>gi|332994178|gb|AEF04233.1| TolC family type I secretion outer membrane protein [Alteromonas
           sp. SN2]
          Length = 616

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +SS   PE +  L ++ + L       + I GH         A  N RLS  RA
Sbjct: 508 NISFASNSSKISPEYVSSLSQVIDALEKYDNAGVIIHGHAS---LDGDAAYNQRLSERRA 564

Query: 293 YSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            +   +L++  + +   RI+ + G+   R  +  +    N+ NRRI+  +
Sbjct: 565 SAVAALLIESTNDIDSRRITSV-GYGETRPLVDEESPAANAKNRRIEATI 613


>gi|88802743|ref|ZP_01118270.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
 gi|88781601|gb|EAR12779.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
          Length = 289

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 15/245 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             TK  +        Q               N++ +    +++T + E    L    +  
Sbjct: 32  TNTKGDLQKTTIEKEQLAAKFSAIEARVENYNTKINSLKSDNVTLERENEVKLSMVGNAA 91

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQD-----LAKKISSTLSGLVADNIVKGVLFET 219
               +        L+K  + A+ + K L+D     +A  +  ++  L  +     +    
Sbjct: 92  VISTQTRALMNETLTKVDVNALSKAKTLKDSLNLAIAYNLKKSIDILEIE-SSDDIDINI 150

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278
            +T ++IS+ D+    +F+ +S         ++ K+  V+    +  + I GHTD+    
Sbjct: 151 DQTVVMISVSDKL---LFNTASYRVKKGAYKLIAKLAAVIKSEPSMDVMIEGHTDSRTIS 207

Query: 279 NIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
           N   +DNW LS+ RA S  ++L  K  V   R+   SG       + +        NRR 
Sbjct: 208 NAVVQDNWDLSVKRATSIVRLLESKYKVEGSRLIA-SGRGSTMPLVDNSSSENRRKNRRT 266

Query: 335 DILVE 339
            I++ 
Sbjct: 267 KIVIL 271


>gi|91975364|ref|YP_568023.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91681820|gb|ABE38122.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 464

 Score = 89.3 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 85/285 (29%), Gaps = 13/285 (4%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           D   ++AI         NL        ++   P    Q   D           V      
Sbjct: 190 DLGGREAIAAALR----NLPEGYSVAENDIKAPPYVFQANKDPVASTLTLTGYVPDNAVH 245

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                   +   +   + N + S           +              I  +    L  
Sbjct: 246 AALADTAGQKFFSEKVVDNLKASIGAPQGFANAVKPALGALSRLSTGTLIVSDREVRLSG 305

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
            +  +    + +  L     +  +  + L        V     +      +   ++T  F
Sbjct: 306 DALFEAAVSQIRAELNKDMPQGWTVKADLSVKPAASPVDATVCQQLFNDLLG--KSTVRF 363

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           D +S+    ++  +L ++ E         I + GHTD+      A  N  LS  RA +  
Sbjct: 364 DSASASIDKDSAGLLDRLIETAMRCPGAAIEVAGHTDS---AGEAGSNQALSERRARAVV 420

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
             ++++G+S +R     G+        ++     + NRRID ++ 
Sbjct: 421 DYMVRAGLSPERFRAF-GYGSKIPLEGNETDAGKAKNRRIDFMIR 464


>gi|325286304|ref|YP_004262094.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321758|gb|ADY29223.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 372

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S +   E    L+++   L  +    ++I GH+D       A+ N  LSL+RA S
Sbjct: 253 LFTSDSYVINKEAKGQLRELVRHLKRNPRLNVTIYGHSDNE---GDAKYNKLLSLNRAKS 309

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
             + L+ +G++ DRI    G+        ++       NRR++ +V + +
Sbjct: 310 VGEFLLDNGLTFDRIK-WQGYGDEIPLATNNSETGRLKNRRVEFVVSESK 358


>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
 gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
          Length = 356

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +   N         RR++I 
Sbjct: 285 EKRAQSVVDYLVSKGIPSNKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEID 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
           protein [Pantoea sp. At-9b]
 gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
           [Pantoea sp. At-9b]
          Length = 356

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQLYSQLSSLDPKDGSVVVLGFTDRI---GSEQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +   N         RR++I 
Sbjct: 285 EKRAQSVVDYLVSKGIPANKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLAPDRRVEID 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|170692926|ref|ZP_02884087.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170141924|gb|EDT10091.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 218

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 46  ELSNKLEQEVKQRQVETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L  S +++ + G TD    R       DNW LS 
Sbjct: 96  FALNSDQLQPQGRDLLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSA 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+++GV    +   + F   +   ++  +   + NRR++I
Sbjct: 156 QRALTVTRALIEAGVPAPSLFAAA-FGSGQPVSSNADEQGRARNRRVEI 203


>gi|163742214|ref|ZP_02149602.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
 gi|161384544|gb|EDQ08925.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
          Length = 211

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        VL +    +    E    + GHTDA      A  N  L L RA +A
Sbjct: 68  FAFDSAQLDGNAHAVLDQQAHWIRQFPEVRFRVFGHTDAV---GSASYNKALGLRRARAA 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  +  F   +  I +      NRR
Sbjct: 125 VNYLVGRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 162


>gi|254480140|ref|ZP_05093388.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
 gi|214039702|gb|EEB80361.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
          Length = 213

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 20/168 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS+     + R++  QD    +   L+  +A            R  +    I    + +
Sbjct: 42  ELSQSLQQEVTRREAEQDRRMVLEEALAAPLASG----------RITLRDGRIGISGSVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S     E   +L  +   L        +++ + G TD  P ++      DNW LS 
Sbjct: 92  FALNSDQLQAEGRELLSSLIPPLKLYLLEQNDLLMVSGFTDDLPIQDGNLHFNDNWELSA 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
            RA +  + L++ G+    +   + F   +  +A+      S NRR++
Sbjct: 152 QRALTVTRALIEEGMPPSLVFAAA-FGAEQPVVANTDSESRSRNRRVE 198


>gi|261855938|ref|YP_003263221.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261836407|gb|ACX96174.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 207

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD       P     L K+   +     +  I + G+TD+       + N  LS  RA +
Sbjct: 100 FDFDKYNLKPAGKEALDKLISEMGDMNSIAKIKVVGYTDSI---GTEKYNIGLSERRANT 156

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             + L    +  D+I    G        ++      + NRR+ + 
Sbjct: 157 VAKYLTAHNIPADKIET-QGMGEADPVASNKTKEGRAKNRRVVVT 200


>gi|253698930|ref|YP_003020119.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251773780|gb|ACT16361.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 204

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD  SS+        L    E L  + +    I GH+D          N  LS  R
Sbjct: 98  ETIYFDFDSSLLNDAARATLVANLEKLKANPKASLRIEGHSDER---GSDDYNLALSERR 154

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           A SA + L   G   +++  + G+   R  +  +     + NRR + ++  
Sbjct: 155 AQSAKKYLQALGFPAEKL-SVLGYGEERPAVKGESEEFWAKNRRDEFVIAR 204


>gi|170725100|ref|YP_001759126.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810447|gb|ACA85031.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 497

 Score = 89.3 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F+  S   LPE   V++ +   L     +   + GHTD          N  LS  R
Sbjct: 387 DGLLFEFDSDKMLPEAKAVVKVVASYLKSHPKQRFYVIGHTDDQ---GKQSYNQLLSDKR 443

Query: 292 AYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +  + L     + +D++    G   +     +        NRR+++++   Q
Sbjct: 444 AKAVVKQLTTAHQIPKDQL-TGKGVGEYSPVANNSNEAGQKLNRRVELVLRSDQ 496


>gi|22127605|ref|NP_671028.1| outer membrane protein [Yersinia pestis KIM 10]
 gi|45443467|ref|NP_995006.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
 gi|150260516|ref|ZP_01917244.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|153949584|ref|YP_001402443.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
 gi|162419496|ref|YP_001605396.1| ompA family protein [Yersinia pestis Angola]
 gi|167401635|ref|ZP_02307129.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167468843|ref|ZP_02333547.1| ompA family protein [Yersinia pestis FV-1]
 gi|170025832|ref|YP_001722337.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           YPIII]
 gi|218927645|ref|YP_002345520.1| putative lipoprotein [Yersinia pestis CO92]
 gi|229836972|ref|ZP_04457137.1| putative lipoprotein [Yersinia pestis Pestoides A]
 gi|229840332|ref|ZP_04460491.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229842412|ref|ZP_04462567.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229900672|ref|ZP_04515796.1| putative lipoprotein [Yersinia pestis Nepal516]
 gi|21960714|gb|AAM87279.1|AE013976_7 putative outer membrane protein [Yersinia pestis KIM 10]
 gi|45438336|gb|AAS63883.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
 gi|115346256|emb|CAL19127.1| putative lipoprotein [Yersinia pestis CO92]
 gi|149289924|gb|EDM40001.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|152961079|gb|ABS48540.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
 gi|162352311|gb|ABX86259.1| ompA family protein [Yersinia pestis Angola]
 gi|167049017|gb|EDR60425.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|169752366|gb|ACA69884.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
 gi|229682011|gb|EEO78103.1| putative lipoprotein [Yersinia pestis Nepal516]
 gi|229690722|gb|EEO82776.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229696698|gb|EEO86745.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229705915|gb|EEO91924.1| putative lipoprotein [Yersinia pestis Pestoides A]
 gi|262360575|gb|ACY57296.1| putative lipoprotein [Yersinia pestis D106004]
 gi|262364521|gb|ACY61078.1| putative lipoprotein [Yersinia pestis D182038]
 gi|320016989|gb|ADW00561.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 168

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD        E +  +QKIG +L+    + + + GHTD+         N +LS  R
Sbjct: 61  NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+ +  I  + G         +      + NRR+ I++   
Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168


>gi|330819528|ref|YP_004348390.1| type IV / VI secretion system protein, DotU family [Burkholderia
           gladioli BSR3]
 gi|327371523|gb|AEA62878.1| type IV / VI secretion system protein, DotU family [Burkholderia
           gladioli BSR3]
          Length = 469

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P  +         K L+ L   +    +  V +                          +
Sbjct: 313 PPPQANAAPKPAGKSLKSLLAPLEQAGALAVDEQPDGRATVRL------------AAGLL 360

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F    +   P  I +L+++   L      + + GHTD  P R+   +DN+ LS  RA + 
Sbjct: 361 FPSGGADIAPAEIPLLRQVAAALNQVKGRVIVVGHTDDQPIRSLKFKDNFALSTARAQNT 420

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDIL 337
             +L   G+ + R  + +G    +            + NRR++IL
Sbjct: 421 LAIL-AQGLDDPRRLEANGAGSSQPIATPPSLPENRARNRRVEIL 464


>gi|146306310|ref|YP_001186775.1| OmpA domain-containing protein [Pseudomonas mendocina ymp]
 gi|330502226|ref|YP_004379095.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
 gi|145574511|gb|ABP84043.1| OmpA domain protein [Pseudomonas mendocina ymp]
 gi|328916512|gb|AEB57343.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 166

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS    E +  L    + L  +   + + GH D          N  L   RA +  
Sbjct: 67  FEYDSSDLKAEAMRALDVHAKDLKGNGARVVLEGHADER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R     +     + NRR+++
Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164


>gi|186471185|ref|YP_001862503.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184197494|gb|ACC75457.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 215

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS     A+K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSARLDDAVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L    E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDQLQPQGRDLLKSLAAPLSAYLRSHDEILMVSGFADDQQVRAGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  + SG+    +   + F   +   ++      + NRR++I
Sbjct: 153 QRALTVTRAFIDSGIPASSVFAAA-FGSEQPVSSNADSEGRAKNRRVEI 200


>gi|194366042|ref|YP_002028652.1| hypothetical protein Smal_2266 [Stenotrophomonas maltophilia
           R551-3]
 gi|194348846|gb|ACF51969.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 212

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 20/173 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                LS+     +K+++      + +   L+G +A            R  ++   I   
Sbjct: 39  AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLVDGRIGIS 88

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285
            + +F  +S    PE   +L+ +   LA           + G TD +P R       DNW
Sbjct: 89  GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGTREEILMVSGFTDDAPVREGNRRFADNW 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            LS  R+ +  + L+  GV  D +   + F   +   ++  +   + NRR++I
Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNADEAGRARNRRVEI 200


>gi|45659294|ref|YP_003380.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45602540|gb|AAS72017.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 428

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S   L  +  +L  +   L  +  +   I GHTD       ++DN  LS +RA + 
Sbjct: 325 FSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTD---LNGDSQDNLILSRNRANAV 381

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
              L+K G+   RI    G       +   +   +  NRR +  +  R
Sbjct: 382 KDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428


>gi|24217036|ref|NP_714517.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24198445|gb|AAN51535.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 428

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S   L  +  +L  +   L  +  +   I GHTD       ++DN  LS +RA + 
Sbjct: 325 FSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTD---LNGDSQDNLILSRNRANAV 381

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
              L+K G+   RI    G       +   +   +  NRR +  +  R
Sbjct: 382 KDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428


>gi|319943060|ref|ZP_08017343.1| lipoprotein [Lautropia mirabilis ATCC 51599]
 gi|319743602|gb|EFV96006.1| lipoprotein [Lautropia mirabilis ATCC 51599]
          Length = 319

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +++      +       GV    TR  +L   +D  +   F  +S+  LP    +L +  
Sbjct: 99  RQMEEQKRAMEEATAGTGVQVTQTRENLL--QLDIPSDISFRVNSAAILPNFQPILDRFA 156

Query: 257 EVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L A+    + I GHTD++        N  LS++RA SA   L+  GV   RI  I G 
Sbjct: 157 QTLVANPATTVQIIGHTDST---GTDAINNPLSVNRAASARDYLVARGVQVSRIM-IDGR 212

Query: 316 AHHRLKIASDP--MNSANRRIDILV 338
                   +      + NRR++I V
Sbjct: 213 GSRDPIADNSTPAGRAQNRRVEIYV 237


>gi|83311658|ref|YP_421922.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
 gi|82946499|dbj|BAE51363.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
          Length = 220

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 16/178 (8%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             + +     +  ++    L    S  L  +    +   V       GI++++    +  
Sbjct: 47  EQVQQGMAKDIGLRETKTPLQDLRSEVLGQVAGAGVEDTVDVGRDDKGIVLNL---ASGT 103

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWRLSLDR 291
           MF   S+   PE + ++++I   L         I I+GHTD +P R      NW LS  R
Sbjct: 104 MFKPGSAEVRPEILPLMKEISGTLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAAR 163

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM------NSANRRIDILVEDR 341
           A S  +V+ + G+   R+  ++  A    ++ +  D         + NRR++I +  R
Sbjct: 164 ALSTLKVMNELGIPTSRMK-LAALADTAPRVPNRSDTGKAYPENQAINRRVEIHIYPR 220



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 58/208 (27%), Gaps = 17/208 (8%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP------- 71
           K     +       W + YAD +T+LMAFF+V+  ++  D +  + ++Q           
Sbjct: 3   KSKFHKENKEAAEDWLLSYADMITLLMAFFIVLVSMSKIDKNKYEQVQQGMAKDIGLRET 62

Query: 72  --------FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
                          A  G+ D  +         ++L+        S +++       K+
Sbjct: 63  KTPLQDLRSEVLGQVAGAGVEDTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKE 122

Query: 124 YQRLENNIFYLSN--SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                    +L+     Q       +            +     ++       +P    +
Sbjct: 123 ISGTLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAARALSTLKVMNELGIPTSRMK 182

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD 209
                    R+ + +    +       +
Sbjct: 183 LAALADTAPRVPNRSDTGKAYPENQAIN 210


>gi|87122282|ref|ZP_01078164.1| OmpA family protein [Marinomonas sp. MED121]
 gi|86162425|gb|EAQ63708.1| OmpA family protein [Marinomonas sp. MED121]
          Length = 204

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 8/158 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + RL D  K     +     D +    +     +     ++      +FD       P  
Sbjct: 28  RARLADADKDGVIDVRDKCKDTLYGTNVDHYGCSQKSTKLLSVELKVLFDTGKHEVKPAF 87

Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
              L+++   L  +    + I GHTD          N  LS  RA +   V+     ++ 
Sbjct: 88  YSELRELASFLKKNPASSVIIEGHTDNV---GSKTSNQTLSFQRASAIAAVITDKFKIAP 144

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           +R+    GF       +++      ANRR+   V  RQ
Sbjct: 145 NRVQA-KGFGETSPIASNETHSGREANRRVVAEVFSRQ 181


>gi|323720608|gb|EGB29686.1| outer membrane protein A ompA [Mycobacterium tuberculosis CDC1551A]
          Length = 291

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 186 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 242

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 243 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 290


>gi|262376393|ref|ZP_06069622.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308532|gb|EEY89666.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 255

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283
           +I    +     F+  S++     I +L ++   L   +     I GHTD+         
Sbjct: 142 IIDAALKNRIIEFESGSAVLATSGIQILDEMVSALNKVSGKKIRIIGHTDS---SGDINK 198

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           N  LS  RA +    L+   V    +    G    +    +   +    NRRI+  V 
Sbjct: 199 NLMLSQQRAEAVKSYLIAKNV-PTHLLSTKGSGSSKPVADNATADGRKRNRRIEFEVL 255


>gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 648

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 11/276 (3%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
           F  +     KG  D         ++   ++                 N K +  R     
Sbjct: 376 FFASNRDGGKGDDDIYYFAAPEDEDTTTVAKHTDPNDPLNPNNPNYINGKPKVVRYFLAG 435

Query: 132 FYLSNSQQSEHCKNSLTRD-SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
             + N +      +++ R   +            K     +       S + ++  K   
Sbjct: 436 TVVENGETPSPIDSAVVRILPDTSDTQIAEYPTAKDGKFGKQSVEEGKSYQLLVQRKGYI 495

Query: 191 RLQDLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             ++        +    L  +              + ++         +D       P+ 
Sbjct: 496 SKREPFSMAGRNIPPIFLTKELTDTTFNVTIKLDKLELNKTFVLENIYYDLDKYNIRPDA 555

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            + L K+ ++L  +  +   +  HTDA         N  LS +RA SA   L   G+  D
Sbjct: 556 AIELDKLVQILKDNPTMTIELSSHTDAR---ATDAYNMTLSQNRAESAVAYLNSKGIEAD 612

Query: 308 RISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340
           R+    G+    L I +   +  +  NRR +  +  
Sbjct: 613 RMEA-KGYGERELIIPNAKTEEEHQRNRRTEFTILS 647


>gi|126175870|ref|YP_001052019.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|152999218|ref|YP_001364899.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|160873831|ref|YP_001553147.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|217971891|ref|YP_002356642.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|304411219|ref|ZP_07392834.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307306514|ref|ZP_07586257.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|125999075|gb|ABN63150.1| OmpA/MotB domain protein [Shewanella baltica OS155]
 gi|151363836|gb|ABS06836.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|160859353|gb|ABX47887.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|217497026|gb|ACK45219.1| OmpA/MotB domain protein [Shewanella baltica OS223]
 gi|304350412|gb|EFM14815.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306910805|gb|EFN41233.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|315266058|gb|ADT92911.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 230

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 10/145 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   F    +        VL  +  
Sbjct: 89  YMDVQETKLRQQLASTGVSVTRSGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAV 145

Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G+TD+         N RLS  RA      LM  GV+  R+    G  
Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRAGEVGNYLMSKGVASARVKS-KGMG 201

Query: 317 HHRLKIASDPM--NSANRRIDILVE 339
                 ++      + NRR++I++ 
Sbjct: 202 EASPIASNANANGRAQNRRVEIVLT 226


>gi|39934843|ref|NP_947119.1| porin [Rhodopseudomonas palustris CGA009]
 gi|39648693|emb|CAE27215.1| OmpA/MotB domain, possible porin [Rhodopseudomonas palustris
           CGA009]
          Length = 441

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +S +       F++ S++    +  +L K+   +       I + G+TD          
Sbjct: 328 RVSALASAEKISFERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTD---GAGKKSA 384

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           N  LS  RA +    L K G+   ++    G+   +   A+D     + NRRI+ +V+
Sbjct: 385 NIALSKRRAEAVVASLTKVGIGSVKLVA-EGYGSAKPIAANDTAEGRAQNRRIEFVVK 441


>gi|308273523|emb|CBX30125.1| hypothetical protein N47_D29340 [uncultured Desulfobacterium sp.]
          Length = 212

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 8/173 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L                 +    KI     G + +N    +  +T     ++++ ++ 
Sbjct: 19  KSLAESFGSLTDKAASSAHPEVDKGKILEKALGGINENANDDIGIKTGAGREVLTMGEK- 77

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDR 291
              +F  +  +  PE+  +L+K+G  +      + I GHTD           NW +S   
Sbjct: 78  --ALFYTNRHLLKPESFALLKKVGNFINQGNYKVLIVGHTDNRDAQEKGYNSNWEISSLM 135

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A    +  ++   +  DRI+   G+   +   ++D       NRRI+I+    
Sbjct: 136 AVQLQKYFIEECKIKPDRITAY-GYGSQQPAASNDTPESRQKNRRIEIIFNSD 187


>gi|171322883|ref|ZP_02911587.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171091749|gb|EDT37280.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 222

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   P     L K+       T   +++ GHTD+         N  LS  R
Sbjct: 116 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVIGHTDSV---GNDAANLTLSKRR 172

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    L   G++  +   +SG        ++      ++NRR+DI ++ 
Sbjct: 173 AETVAGYLKSHGLNA-QTVSVSGRGSADPVASNATPDGRASNRRVDISLQR 222


>gi|149377921|ref|ZP_01895649.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
 gi|149357811|gb|EDM46305.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
          Length = 402

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS+        ++++   +    E  + I GH+D+      A  N  LS  RA + 
Sbjct: 297 FPTNSSVIGNAFDNEIRRVANFMLEYPETNVEIAGHSDSI---GEAEYNRFLSQRRAEAV 353

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              L  + G+SEDR++ + G+       ++D     + NRR++  ++ R+
Sbjct: 354 ATRLTDALGISEDRVNAV-GYGESEPVASNDTAAGRAENRRVEARIQVRR 402


>gi|77460924|ref|YP_350431.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77384927|gb|ABA76440.1| putative OmpA family outer membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 237

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 10/146 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                   L A     GV  +     I + +        F   S+         L  +  
Sbjct: 86  YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIASSFYQPLNNLAN 142

Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L   +   I I G+TD++      + N  LS  RA S    L   GVS   +S   G  
Sbjct: 143 SLKEFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGANLSA-RGAG 198

Query: 317 HHRLKIASDP--MNSANRRIDILVED 340
                 ++      + NRR+++ ++ 
Sbjct: 199 PDNPIASNGDVNGRAQNRRVEVNLKA 224


>gi|119774051|ref|YP_926791.1| OmpA/MotB [Shewanella amazonensis SB2B]
 gi|119766551|gb|ABL99121.1| OmpA/MotB [Shewanella amazonensis SB2B]
          Length = 368

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  L    A      V                  +  F  +SS+  P +   +
Sbjct: 213 DSDNDGVNDDLDKCPATPADHKVDAYGCTVYKDDVTTHNLGSLRFANNSSVINPSSYESV 272

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           +K+   +       + I GH            N  LS  RA +A ++L++  G+S +R++
Sbjct: 273 EKLANYMNQHPGSTVEIGGHASNV---GNPDYNMTLSEKRANAAAKLLVEKYGISANRVT 329

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
              G+   R  +  +     +ANRR++ +V   +
Sbjct: 330 A-KGYGITRPVMDGNTAEAHAANRRVEAVVTGSE 362


>gi|188992991|ref|YP_001905001.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734751|emb|CAP52961.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris]
          Length = 431

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283
           +I++ D+    +FD   +   P+   VL  +   L   +   + +RGHTDA   +     
Sbjct: 316 VITLSDR---ILFDFDKAAIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 369

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336
           N  LS  RA +    L   G ++   +   G+   +    +      +P     NRR+++
Sbjct: 370 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427

Query: 337 LVE 339
            + 
Sbjct: 428 FLR 430


>gi|94311184|ref|YP_584394.1| OmpA/MotB [Cupriavidus metallidurans CH34]
 gi|93355036|gb|ABF09125.1| putative outer membrane lipoprotein [Cupriavidus metallidurans
           CH34]
          Length = 167

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F         E    L ++   L  +  + + + GHTD          N +LS+ 
Sbjct: 59  PDKVLFGFDDDTVSAEQQNALARVARTLRDAGIDALRVDGHTDNV---GTIEYNQQLSMR 115

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA +  +VL+  G + D +  + GF   R    +      + NRR+ I+V 
Sbjct: 116 RAEAVARVLLTCGFARDHLD-VRGFGKTRPIADNGTALGRAENRRVAIIVT 165


>gi|326799502|ref|YP_004317321.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326550266|gb|ADZ78651.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 647

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 20/204 (9%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS--------TLS 204
             +      D   S+  E+   L   + E     + +  ++   + +            +
Sbjct: 447 DKETEEPLADANVSLLDEQGTLLAKKTSESAGRFEFEVDVEQAYQVLGEKVGYIADSAFT 506

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                N    V        +      + +   +D        +  V+L  + +++  +  
Sbjct: 507 NTNGLNPGDTVKVALYLDQLKQGKTFRLDNIYYDFDKFNIRKDAAVILDGLVKIMKDNPT 566

Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I +  HTD+       + N  LS  RA +A   L+  G++ DR+    G+   +L   
Sbjct: 567 LKIELSSHTDSR---GRDKYNMTLSQKRAQAAVDYLVSRGIARDRMIA-KGYGESKLLNR 622

Query: 324 -------SDPMNSANRRIDILVED 340
                  S+  +  NRR +  V +
Sbjct: 623 CANGIKCSEAEHQLNRRTEFTVLE 646


>gi|325274366|ref|ZP_08140461.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324100500|gb|EGB98251.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 163

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GHTD+      A  N  L
Sbjct: 52  YDLSGKVLFGSDLDSLNSQSQAIVERIGKALLGVGIQRVRVDGHTDS---SGKAAYNQEL 108

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V
Sbjct: 109 SERRAQSVAKALVGVGMQPQNIQS-QGLGSSQPVADNRTSAGRTENRRVSIVV 160


>gi|315637079|ref|ZP_07892302.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478615|gb|EFU69325.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 854

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
            +F+ +S++   ET   +      L  + E  +I  GH    P    A  N +LS  RA 
Sbjct: 747 VLFENNSAVIKEETKGKVLSFARYLVDNKEFNTIIEGHASKDPTA-SAAHNQKLSEQRAS 805

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +   +L+ +GV   RI  I G  H+     +        NRRID ++  +
Sbjct: 806 AIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRIDAILIRK 854


>gi|262360905|gb|ACY57626.1| hypothetical protein YPD4_0717 [Yersinia pestis D106004]
          Length = 208

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 73  DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 129

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +     L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 130 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 179


>gi|163739042|ref|ZP_02146455.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
 gi|161387847|gb|EDQ12203.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
          Length = 183

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +         I     +   F  +           L++  +   
Sbjct: 50  VMDDGAEGFMTPHVTRDGKPVCRRGDICGVMPSDQFFATNRHRISAAGQQRLREFFQTAN 109

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +    I GHTD+         N RLS  RA +  +V    G    RI +  G+     
Sbjct: 110 ARS--FIITGHTDSR---ASDEYNMRLSQRRANAVAKVGQSVG---ARILEARGYGERDP 161

Query: 321 KIASDPMN--SANRRIDIL 337
           ++ +D     + NRR++I+
Sbjct: 162 RVPNDSAANMAQNRRVEII 180


>gi|163788754|ref|ZP_02183199.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
 gi|159875991|gb|EDP70050.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
          Length = 636

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD   S    +    L+ I +V+     +I  I  HTD+       + N +LS  R
Sbjct: 521 NPIFFDFDKSKIRTDAQYELENIVDVMRRHKSMIIKIESHTDSR---GRDKYNLKLSDRR 577

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRR 333
           A S    L+  GV  +RI    G+   +L          ++  +  NRR
Sbjct: 578 AKSTRDYLISRGVEANRIESAIGYGETQLLNNCGNRVKCTEEEHQVNRR 626


>gi|114765063|ref|ZP_01444210.1| Possible outer membrane protein, OmpA family [Pelagibaca
           bermudensis HTCC2601]
 gi|114542610|gb|EAU45635.1| Possible outer membrane protein, OmpA family [Roseovarius sp.
           HTCC2601]
          Length = 452

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDAS 275
                + + +I      +F  + +        ++  I +V+  + E I    + GHTD+ 
Sbjct: 323 REDVSLAVVVIQATQPEVFRSAKADINDVYSPLVGSIAQVIRDNIEFIGAVRVVGHTDSI 382

Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           P    N  R N  LS  RA +   +L   GV  + +    G A       +      + N
Sbjct: 383 PVQTSNPFRSNQGLSEARAKTIADMLRAQGVPAE-LVSSEGRAAEDPIADNGTRDGRARN 441

Query: 332 RRIDILVEDR 341
           RR++++++ +
Sbjct: 442 RRVEVILQKK 451


>gi|91776742|ref|YP_546498.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gi|91710729|gb|ABE50657.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 1402

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 9/130 (6%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
                  +L  +++      F+   +     ++  L+++   L       I I GHTD  
Sbjct: 96  VPQAEPQVLTRLVENSGAAQFESGKADLTDSSVAALEQLAAQLQGKKNVRIDIAGHTDNQ 155

Query: 276 PFRNIAR----DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN-- 328
                AR    DN  LS  R+ +    L  K G+ + ++  ISG+   +   ++D     
Sbjct: 156 RLSPNARKIFRDNQGLSEARSLAVAAFLKQKLGLEDSQL-SISGYGESQPVTSNDTPEGM 214

Query: 329 SANRRIDILV 338
           + NRR+ I V
Sbjct: 215 AQNRRVIIRV 224


>gi|307727249|ref|YP_003910462.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307587774|gb|ADN61171.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 219

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 46  ELSNKLEQEVKQRQLETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    P+   +L+     +   L  + E++ + G TD    R       DNW LS 
Sbjct: 96  FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEMLMVSGFTDDQRLREGNRRFADNWELSA 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+ +GV    +   + F   +   ++  +   + NRR++I
Sbjct: 156 QRALTVTRALIDAGVPVSSVFAAA-FGSGQPVSSNADEQGRARNRRVEI 203


>gi|229592593|ref|YP_002874712.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
 gi|229364459|emb|CAY52284.1| putative putative lipoprotein [Pseudomonas fluorescens SBW25]
          Length = 163

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F          +  ++Q+IG+ L     E + I GHTDA         N +LSL R
Sbjct: 56  GKVLFGSDVEALNQPSTDIVQRIGKALLGVGIERVRIDGHTDA---SGKETYNQQLSLRR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A S   VLM  G+ E+ I ++ G        ++D       NRR+ I+V   
Sbjct: 113 AKSVATVLMSVGMKEENI-QLRGLGSSEPVASNDTAAGRTENRRVSIVVMSD 163


>gi|329893686|ref|ZP_08269820.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
           proteobacterium IMCC3088]
 gi|328923613|gb|EGG30925.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
           proteobacterium IMCC3088]
          Length = 182

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 6/123 (4%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275
                   +        +   F+  SS        VL K   +L ++   + + GHTD  
Sbjct: 63  QVAAELRRLQDDARMAGSVVYFEFDSSTLTDTGRAVLDKHVALLKNTGASVRLEGHTDER 122

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
                   N  L   RA +    +M  G+   R+  IS F   +     +S+   S NRR
Sbjct: 123 ---GTREYNMALGERRANAVRDYMMVKGIPGYRLESIS-FGEEKPVSYGSSEVSWSQNRR 178

Query: 334 IDI 336
           ++I
Sbjct: 179 VEI 181


>gi|300693692|ref|YP_003749665.1| outer membrane protein; ompa/motb domain [Ralstonia solanacearum
           PSI07]
 gi|299075729|emb|CBJ35033.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
           solanacearum PSI07]
          Length = 280

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 12/246 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D +     T     +  G     +  +              +   +  +         
Sbjct: 37  PGDPAPASAATPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 96

Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                K    +          +          ++ + + Q LA  +++TL          
Sbjct: 97  TGNVQKILSPQIKQVNRGQLNIDGTQVAMHGDVQNEAQRQQLASDMATTLGASYTIKNGL 156

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            V   + ++ +  ++ ++     F+  S+   P+   +L ++  VL         I GHT
Sbjct: 157 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 214

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D          N  LS  RA +    L+  G     ++ I G    +   A+  D   S 
Sbjct: 215 DN---SGSRAMNLNLSQTRAETVKNYLISKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 270

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 271 NRRIEF 276


>gi|327402922|ref|YP_004343760.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327318430|gb|AEA42922.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 321

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 88/223 (39%), Gaps = 10/223 (4%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            + +    + +   +   ++S + +  +   +++ +    +    +S    +   L    
Sbjct: 91  SQNEVYEQKLDQMRMKGQKESANYQADIDSKNQELQRKEDALKTLESELIAKEKLLIERE 150

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +      +  KR  D  K++ + +S  +     KG+        I +S+       +F  
Sbjct: 151 ERVTELEEMIKRKDDAMKQLKTRVSAALKGFENKGLTVVEKNGKIYVSL---EAKLLFAS 207

Query: 240 SSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAY 296
            S+    E    L  + +VL       I + GHTD     + A  + NW LS+ R+ +  
Sbjct: 208 GSTTVEAEGKKALVDLAKVLENEKDLEIIVEGHTDTDKLASTAHPKSNWELSVLRSTAVV 267

Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           ++++  S ++  ++    G   +    A D   + NRRI++++
Sbjct: 268 EIMIGNSKMNPMQLMAA-GRGEYHPVDAKD--KAKNRRIEVII 307


>gi|115353202|ref|YP_775041.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115283190|gb|ABI88707.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 243

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 64/223 (28%), Gaps = 7/223 (3%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
             Q           +  QQ    + +        +    +     +             +
Sbjct: 24  ATQSGPTYTVRAIKATDQQGPVFRVTCEGLVSSTRSCEAAAQKVCAGKPVTPLQAVDRVR 83

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                   ++          ++++  V       V  +     +    +  + +  F   
Sbjct: 84  GGAAMGDPRELTFMCGVPPQASVAPPVVAQPQPVVQAQPAAEPVAQRHVLLQGSANFAFD 143

Query: 241 SSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S+   P     L +  +V        +++ G+TD+         N RLS  RA +    L
Sbjct: 144 SAALTPSARQELDRFLDVNREARFRRVTVTGYTDSQ---GAHAHNVRLSEARARAVATYL 200

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
              G+  +  + + G        ++      + NRR++I +E 
Sbjct: 201 RTGGLHAEHFTTV-GKGAAEPVASNATAEGRAQNRRVEIELEK 242


>gi|262275459|ref|ZP_06053269.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
 gi|262220704|gb|EEY72019.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
          Length = 223

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    +   P    +L  I + +  S+  ++I GHTD+         N  L L RA S  
Sbjct: 114 FGFDKASLTPTGKKILAGIVDSITTSSTPLTITGHTDSV---GSHAYNLTLGLKRAESVK 170

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             L+ +G +  +I  +S     +    ++     + NRR+D++
Sbjct: 171 GYLVDAGKNNAQIKTVSA-GETKPVTTNETAKGRAENRRVDVV 212


>gi|312959042|ref|ZP_07773561.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311286812|gb|EFQ65374.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 256

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 10/140 (7%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                 L       GV  +     I + +        F  +S          L  +   L
Sbjct: 89  DQQEKKLRESMANTGVEVQRQGDQIKLIM---PGNITFATNSDAISSSFYQPLNNLANSL 145

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV+   +S   G    
Sbjct: 146 KQFNQNTIQIVGYTDST---GSRQLNMDLSQRRAQSVANYLTSQGVNGANLSA-RGAGPD 201

Query: 319 RLKIASDP--MNSANRRIDI 336
               ++      + NRR+++
Sbjct: 202 NPIASNADVNGRAQNRRVEV 221


>gi|320093629|ref|ZP_08025513.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319979417|gb|EFW10895.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 402

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 14/116 (12%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            ++ +FD   S    +    L K+  VL  +      + GHTD+         N  LS  
Sbjct: 289 DDSVLFDFGESTVRADAADTLAKLASVLTDAGAPTAHVYGHTDSV---GDDASNQTLSEQ 345

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338
           RA +    L K+G +        GF   +    +             ANRR++I +
Sbjct: 346 RAKAVVDELKKNGATTA--LDWKGFGETQPIAPNTNDDGSDNPAGRQANRRVEIYI 399


>gi|71907808|ref|YP_285395.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847429|gb|AAZ46925.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 261

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  ++   P   V+L ++   +         + GHTD+       + N  LSL RA S 
Sbjct: 158 FEVGAATLTPAGRVILDEMYAAIKQIGTPKVQVIGHTDS---SGSRQANIALSLSRANSV 214

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              L++ G+  D ++ + G    +   ++D     + NRRI+  +
Sbjct: 215 RSYLIEKGLPADGLTAV-GSGPDQPVGSNDSSEGRAKNRRIEFKL 258


>gi|83748126|ref|ZP_00945154.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
 gi|207739125|ref|YP_002257518.1| outer membrane protein [Ralstonia solanacearum IPO1609]
 gi|83725208|gb|EAP72358.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
 gi|206592498|emb|CAQ59404.1| outer membrane protein [Ralstonia solanacearum IPO1609]
          Length = 277

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 12/246 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D ++          +  G     +  +              +   +  +         
Sbjct: 34  PGDPALATTANPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93

Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                K    +          +          ++ + + Q LA  +++TL          
Sbjct: 94  TGNVQKILSPQIKQVNRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            V   + ++ +  ++ ++     F+  S+   P+   +L ++  VL         I GHT
Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D          N  LS  RA +    L+  G     ++ I G    +   A+  D   S 
Sbjct: 212 DN---SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 267

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 268 NRRIEF 273


>gi|323700864|ref|ZP_08112776.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323460796|gb|EGB16661.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 392

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 15/263 (5%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           D     + S   ++D+      T+    L+  S  Q+     +        +    +   
Sbjct: 130 DGTTLDDSSVTIQVDVFAAGSGTRLWTMLQSASIEQRDPEDFIYFVHETRMSHSPFDQII 189

Query: 145 NSLTRDSE---KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
            ++ RD     K            +   E                +     Q      ++
Sbjct: 190 RAIARDMAVPLKAWLPDPDATYPYASTPEAVKAGLEAGPSATAQGRDLPPEQTAGTPAAA 249

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                V     +    E       IS +D      FD   +   P ++ VL  +GE L  
Sbjct: 250 PAGQPVQGAAARKEPAEDEAPRPGISGVDLNIQ--FDFDKATIQPASLAVLDALGETLNS 307

Query: 262 STEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                  I + GHTDA      A  N  LS  RA +    L+    ++ D I  + GF  
Sbjct: 308 PEFKGRSIIVGGHTDA---SGGAEYNLTLSKQRAEAVKSYLVDKWHINPDLIEAV-GFGK 363

Query: 318 HRLKIASDPMN--SANRRIDILV 338
            R             NRR++I +
Sbjct: 364 SRPLTEGTTAADQQRNRRVEIRL 386


>gi|228910334|ref|ZP_04074150.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
 gi|229032155|ref|ZP_04188131.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
 gi|228729161|gb|EEL80161.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
 gi|228849286|gb|EEM94124.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
          Length = 123

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
              +FD   +    E++ + +++  +L + S   I++ GHTD  P  N     NW LS  
Sbjct: 6   ENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQ 65

Query: 291 RAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           RA +  QVL+++  +  ++ S I G+  +R    +D     + NRR+++ + 
Sbjct: 66  RAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 116


>gi|317153383|ref|YP_004121431.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943634|gb|ADU62685.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 254

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 8/253 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           ++   ++   + + +   D  +                F++     +E  +         
Sbjct: 2   ARKAEEVVQRKPLREPPRDEGLPPWMATFADMMTLLLCFFVLLLSFAEQSEEKYRDALGS 61

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            K      +L    +    +     SKE +  +   +RL         +L       + +
Sbjct: 62  LKGAFGVRELRTVSDDMAPFNTSQSSKELMAKISTDERLLLGVVMRIKSLMEDEDIKLKE 121

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
           G      R G+   I    +  +F   ++    +   VL K+  VL      + +RGHTD
Sbjct: 122 GTGVAADRDGV---IFSADSAMLFAPGTADLAADADTVLDKVVTVLKDYNLSLVVRGHTD 178

Query: 274 ASPFRN-IARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
             P        NW LS  RA  A    L +SG+   R   + G+A  R    +D   +  
Sbjct: 179 DRPISTLKFPSNWELSSARAAVALDYILRESGIGISRAKAV-GYADTRPAAPNDSDENRL 237

Query: 331 -NRRIDILVEDRQ 342
            N+R++  +   Q
Sbjct: 238 KNQRVEFYLHMPQ 250



 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTV 43
            + ++ +K +        L  W   +AD MT+
Sbjct: 4  KAEEVVQRKPLREPPRDEGLPPWMATFADMMTL 36


>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 356

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           +       T +FD  SS         L  + E L      + +I+G+TD++     A  N
Sbjct: 236 VVFPALTVTSLFDFDSSELTNS--DSLTAVIERLNQVPTAIANIKGYTDST---GAAAYN 290

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             LS  RA +    L+ +G+  ++I ++ GF      + +D       NRR+ I ++ 
Sbjct: 291 QALSERRAQAVADDLIAAGIKPEQI-EVHGFGEQFPVMKNDTSEHRHENRRVLIHIQS 347


>gi|307293378|ref|ZP_07573224.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
 gi|306881444|gb|EFN12660.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
          Length = 291

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 71/279 (25%), Gaps = 8/279 (2%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                    + S     +  P   S+       +            I S     + Q   
Sbjct: 13  MIALLSGAASGSLSAQTQDAPAAPSADVSATAYLPAEKVAGPEIKGIISARSGDKMQVTA 72

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            +              ++        +    +T L   +                    +
Sbjct: 73  ADGSKSVIQIDDATKISASKGLFGLNRSKLAATSLLNGLPVTVKTLQTGGGLLASQINLQ 132

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            K L+  A  I +  +    +              I    +       FD   ++   + 
Sbjct: 133 NKDLK-TASMIHNGTAQGFEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQA 191

Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
              L          +  +  + G+TD++        N  LS  RA      L ++ G   
Sbjct: 192 KNDLCATASTAEGMSNALLLVVGYTDST---GGDEFNQELSEKRAGRVVNYLQQACGWKP 248

Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
            R+   +G A      ++D     + NRR+ + +   +G
Sbjct: 249 YRMLTPTGMAKADPLASNDTAEGKAQNRRVAVNILVSKG 287


>gi|145588679|ref|YP_001155276.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047085|gb|ABP33712.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 187

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           ++D + S   PE    L KI   L+     + I  G+TD+         N  L   RA S
Sbjct: 81  LYDFNKSDLKPEGKATLDKIAADLSKIKLEVIIAVGNTDSV---GTDAYNMALGQRRAQS 137

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
               L+  GV   RI             ++      + NRR DI V
Sbjct: 138 VKTYLVSKGVDASRIYT-ESKGKSNPVASNATAEGRAKNRRTDIEV 182


>gi|326563483|gb|EGE13746.1| OmpA family protein [Moraxella catarrhalis 103P14B1]
 gi|326572976|gb|EGE22955.1| OmpA family protein [Moraxella catarrhalis CO72]
 gi|326573791|gb|EGE23748.1| OmpA family protein [Moraxella catarrhalis 101P30B1]
          Length = 551

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D+   ++ ++       +  G   E     ILI+ +       F   S+    E
Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L    E L    E    I GHTD          N  LS  RA +  + L+  GV+ 
Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +R++   G +      ++        NRRI+ ++
Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528


>gi|313677086|ref|YP_004055082.1| membrane protein [Marivirga tractuosa DSM 4126]
 gi|312943784|gb|ADR22974.1| putative membrane protein [Marivirga tractuosa DSM 4126]
          Length = 504

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
            T+ ++K   L  + DL      +       +S  K L + ++K + +    I S+    
Sbjct: 306 GTQIAQKNFSLGFAVDLHLENAAQMASTEFSVSIFKRLPITKQKEVANDEYAIGSSREFE 365

Query: 207 VADNIVKGVLFETTRTGILISI---IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +   + V          +S     + R    +  + +    E    L  I  ++  + 
Sbjct: 366 DDNFQDQPVKVIEKEYQTSVSRDFSFELRKNFNYGFNETNLNDEAKSYLDDIAVMMEANP 425

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              + + GHTD          N ++S +RA      L   G++ +R+    G        
Sbjct: 426 ALKLKVTGHTDNI---GTEDANQKISEERAKGVRDYLESIGIAAERL-SYEGKGATAPLY 481

Query: 323 ASDPM--NSANRRIDILVEDRQ 342
            ++     + NRR++ L+   +
Sbjct: 482 KNNTEENRAKNRRVEFLIYAEK 503


>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
           [Pantoea sp. aB]
 gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
           [Pantoea sp. aB]
          Length = 356

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +   N         RR++I 
Sbjct: 285 EKRAQSVVDYLVSKGIPSNKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEID 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|120436189|ref|YP_861875.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578339|emb|CAL66808.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 620

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 86/255 (33%), Gaps = 12/255 (4%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
             +N  E  + N  D +  +        +                    +   Q ++   
Sbjct: 363 GIENLGEPVNSNMDDFAYFQVSDSKEGYISTNREGGSDDIFVFNKLNPLILKGQVTDAVN 422

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            S    +          ++      EE  +   ++++K   ++ K+   +  +   ST+ 
Sbjct: 423 GSPIAAATVRLMDENKKEIAFLETDEEGNYETEIARDKKFPVEAKEIEYETFEGEISTMD 482

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               + ++  +     +    +  + + +   FD   S   P+    L K+  ++     
Sbjct: 483 SDEKEEMIYDIELSPVKD---VEYLAEIDNIYFDFDKSNIRPDAATELDKLVALMKDEYP 539

Query: 265 VISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            + I    HTD          N +L+  RA S Y  L+  G+SEDRI +  G+   +  I
Sbjct: 540 ELVIEIGSHTDRR---GTNSYNEKLAERRAKSTYDYLVSKGISEDRIVEFKGYGETKPAI 596

Query: 323 A----SDPMNSANRR 333
                S+  +  NRR
Sbjct: 597 DCDRCSEKDHQLNRR 611


>gi|23015570|ref|ZP_00055342.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 161

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   S    +    L K    L        ++ GH D          N  L   R
Sbjct: 56  DRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADER---GTREYNLALGEKR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A S  + L  +GV+  R+  +S +   R     +++   S NRR
Sbjct: 113 ANSVAEYLKAAGVAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155


>gi|325525950|gb|EGD03642.1| putative OmpA/MotB family outer membrane protein [Burkholderia sp.
           TJI49]
          Length = 405

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           ++ +R+             L  +     V          +++   R   MF   +    P
Sbjct: 251 RQAQRMSPFDSLARDLEQRLRDEVAAGNVELIRDPGRHALTL---RFVGMFVPGAVTVAP 307

Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303
               V+   G  +A   E   +R  G+ D++P  +  +  N  LS  RA +  ++L+ +G
Sbjct: 308 WGASVVASAGREIASIAEGTVVRVVGYADSAPAGSARQVSNQALSEARAENVARILVAAG 367

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    + ++ G         +      + NRR++++V
Sbjct: 368 IPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403


>gi|260425871|ref|ZP_05779850.1| OmpA family protein [Citreicella sp. SE45]
 gi|260420363|gb|EEX13614.1| OmpA family protein [Citreicella sp. SE45]
          Length = 203

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S    P+    +++       +     I GHTDA         N RLS +RA S  
Sbjct: 106 FATDSYAISPQGQARIREFFR--NATAFGFIITGHTDAR---ASDAYNRRLSYNRANSVA 160

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           +V   +G    RI  + G+        +      + NRR++IL
Sbjct: 161 RVARSAG---ARIVDVRGYGESYPVATNSTAEGMARNRRVEIL 200


>gi|197116693|ref|YP_002137120.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
 gi|197086053|gb|ACH37324.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
          Length = 204

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           S  D   T  FD  SS+        L    E L         I G+TD          N 
Sbjct: 92  SQADALETIYFDFDSSLLSDTARATLAANLEKLKAKPGAALRIEGNTDER---GSDDYNL 148

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            LS  RA SA + L   G    ++  + G+   +  +  +     + NRR + ++  
Sbjct: 149 ALSERRAQSAKKYLQALGFPASKL-SVVGYGEEKPAVKGEGEEIWAKNRRDEFVIVR 204


>gi|33596991|ref|NP_884634.1| putative lipoprotein [Bordetella parapertussis 12822]
 gi|33566442|emb|CAE37695.1| putative lipoprotein [Bordetella parapertussis]
          Length = 200

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 16/136 (11%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270
            +GV     +  + I+++      +FD   +  L      LQ I +++    T +++I G
Sbjct: 69  HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEG 125

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--------I 322
           HTD+   +     N  LSL RA +  Q L   GV   ++  + G    R           
Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPNQLANGA 181

Query: 323 ASDPMNSANRRIDILV 338
            +    + NRR++ ++
Sbjct: 182 DNPQGRAQNRRVEFVL 197


>gi|325286203|ref|YP_004261993.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321657|gb|ADY29122.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 276

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 96/241 (39%), Gaps = 9/241 (3%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEHCKNSLTRDSEKGKDLCKSTDL 163
            + +   + K   T    + + LE     +           N+LT D++          +
Sbjct: 25  ELQQAHGETKSQLTKTAVEKEELEAKFAKIEARVADYNSKINALTEDNDAKLISADGAVI 84

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             ++  +    L  +S E+++  K  K   +LA  +S  L   +  N +           
Sbjct: 85  SNNVKAKMRETLKNVSPEQLMGAKTLKDSMNLA--LSHNLKKSIGTNSLNEDEDIAIDID 142

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282
             + +I   +  +F+ +S     +   +LQK+ +V+     + + + GHTD+        
Sbjct: 143 DTVVMISISDKLLFNTASYNVSNKADAILQKLADVINSEPSIEVMVEGHTDSRSISTPKV 202

Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            DNW LS+ RA S  + L  K  V+ +++   SG + +    ++D     + NRR  I++
Sbjct: 203 TDNWDLSVLRATSIVRKLQTKYNVAPEKLIA-SGRSSYVPLASNDTKEDRAKNRRTRIVI 261

Query: 339 E 339
            
Sbjct: 262 L 262


>gi|300313671|ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
 gi|300076456|gb|ADJ65855.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD   +   PE   VL +    L  +    ++I GHTD +        N  LSL 
Sbjct: 107 PSDISFDTGRADIKPEMRPVLDRFAATLVENPATTVTIVGHTDNT---GSDAINDPLSLQ 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA      L   GV+ +R   I G   H   +A+  D   + NRR++I V
Sbjct: 164 RASRTRDYLSSRGVAANRF-SIQGRGSHEPLVANTSDANRARNRRVEIFV 212


>gi|145299366|ref|YP_001142207.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142852138|gb|ABO90459.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 162

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D  N  +F   S    P+T V+++K+G  L         I GHTD+         N +LS
Sbjct: 52  DFSNRVLFANDSEALNPDTRVLVEKLGMTLLGVGLNKARIDGHTDS---NGPEAYNDQLS 108

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           L RA S   VL+  G+    +  I G         +      + NRR+ I++ +
Sbjct: 109 LKRAKSVADVLVPVGMQPANLD-IRGRGERDPVADNKTAAGRAENRRVGIIISN 161


>gi|294139179|ref|YP_003555157.1| OmpA family protein [Shewanella violacea DSS12]
 gi|6141577|dbj|BAA85891.1| unnamed protein product [Shewanella violacea]
 gi|293325648|dbj|BAJ00379.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 220

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   F        P    VL  +  
Sbjct: 80  YMDVQEAELRKQLRSTGVSVTRSGDNIVLNM---PNEVTFGVDEVHLNPGAKNVLNSVAL 136

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        I+I G+TD+         N RLS  RA      L+   V   R+    G  
Sbjct: 137 VAKEYDNTQINILGYTDS---SGSESYNLRLSKVRAVEVADYLISQKVEYARVRS-EGIG 192

Query: 317 HHRLKIASDPMNSA--NRRIDILV 338
             R   ++        NRR++I++
Sbjct: 193 EARPIASNSTAQGRTQNRRVEIIL 216


>gi|326571329|gb|EGE21346.1| OmpA family protein [Moraxella catarrhalis BC8]
          Length = 551

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D+   ++ ++       +  G   E     ILI+ +       F   S+    E
Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQVINFALDSTEIPQE 438

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L    E L    E    I GHTD          N  LS  RA +  + L+  GV+ 
Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +R++   G +      ++        NRRI+ ++
Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528


>gi|309779564|ref|ZP_07674325.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
 gi|308921805|gb|EFP67441.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
          Length = 217

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  ELSSKLENEVKQREAEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGINGNVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S    PE   +++ +   LA       E++ + G +D    R       DNW LS 
Sbjct: 93  FAINSDQLQPEGRALMKSLAGPLAAYLTSREEILMVSGFSDDQQVRAGNRLFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  + L+  G+    +   + F   +   ++  D   + NRR++I
Sbjct: 153 KRALTVTRALIDEGIPASSVFAAA-FGSQQPVSSNADDVGRAKNRRVEI 200


>gi|296113686|ref|YP_003627624.1| OmpA family protein [Moraxella catarrhalis RH4]
 gi|295921380|gb|ADG61731.1| OmpA family protein [Moraxella catarrhalis RH4]
          Length = 551

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D+   ++ ++       +  G   E     ILI+ +       F   S+    E
Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L    E L    E    I GHTD          N  LS  RA +  + L+  GV+ 
Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +R++   G +      ++        NRRI+ ++
Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528


>gi|227115434|ref|ZP_03829090.1| putative porin [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 505

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R + LAK        +    +       T   G++  + D     MFD +S+    + 
Sbjct: 78  QNREEALAKIAQEENIAMTTRALQSQEKSGTETVGLVAQVQDS---GMFDTNSAQLSTDG 134

Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +  ++KI   +     + VI + GHTDA+     A  N RLS  RA +  +VL ++G+S 
Sbjct: 135 LRQVKKIATAMKEGDQSGVILVVGHTDAT---GSAEWNQRLSEQRAQNVGRVLEQAGLSA 191

Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
            ++    G    R    +      +ANRR++I+
Sbjct: 192 QKLY-FQGAGSARPVADNATVTGRTANRRVEIV 223


>gi|304312214|ref|YP_003811812.1| hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
 gi|301797947|emb|CBL46169.1| Hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
          Length = 222

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 12/152 (7%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q +A +++  L   +   +   V  E     I+I I +      F  +++   P+ + VL
Sbjct: 77  QQVAVRVALALKAPIERGL---VEVEAVGRYIVIRIPEAT---CFPTNAATLRPQCLPVL 130

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARD-NWRLSLDRAYSA-YQVLMKSGVSEDRI 309
             I   L    +   ++ GH+D  P        NW  +  RA +   ++L  +G S D  
Sbjct: 131 VTIRSALQGLEKARYTVAGHSDDVPINTARYSSNWEFAAARAGAVLVELLKATGFSADHF 190

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +  S +   R  +A+      + NRR++++VE
Sbjct: 191 TLAS-YGPTRPLVANTSADNRARNRRVEVVVE 221


>gi|226940371|ref|YP_002795445.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
 gi|226715298|gb|ACO74436.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
          Length = 226

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 16/154 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            ++ +D  +++++ +         +  + +     IL+++  Q     FD +S+   P  
Sbjct: 81  DRQARDFQRQLATQIRD------GQIFVVKRADNSILVTMTSQTA---FDTNSASLKPGF 131

Query: 249 IVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  +  I  ++       + I GHTD++      R N  LS +RA +    L+   V   
Sbjct: 132 MPTINTISRIVNQYGKTTLDITGHTDST---GNDRINVPLSQNRAAAVQNALLSRNVHPQ 188

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R+S   G    + + ++        NRR++IL+E
Sbjct: 189 RLSAY-GMGASQPRASNASEAGRQLNRRVEILIE 221


>gi|326562428|gb|EGE12747.1| OmpA family protein [Moraxella catarrhalis 7169]
 gi|326562797|gb|EGE13092.1| OmpA family protein [Moraxella catarrhalis 46P47B1]
 gi|326569136|gb|EGE19198.1| OmpA family protein [Moraxella catarrhalis BC1]
 gi|326570622|gb|EGE20658.1| OmpA family protein [Moraxella catarrhalis BC7]
 gi|326574786|gb|EGE24720.1| OmpA family protein [Moraxella catarrhalis O35E]
          Length = 551

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D+   ++ ++       +  G   E     ILI+ +       F   S+    E
Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L    E L    E    I GHTD          N  LS  RA +  + L+  GV+ 
Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +R++   G +      ++        NRRI+ ++
Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528


>gi|298208824|ref|YP_003717003.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
 gi|83848751|gb|EAP86620.1| putative flagellar motor protein MotB [Croceibacter atlanticus
           HTCC2559]
          Length = 280

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 89/237 (37%), Gaps = 10/237 (4%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           N+      +  +K++ Q   N+I     +  ++        D++       +   E    
Sbjct: 34  NTRSTLTKTQVEKEELQAKYNSIQDRVEAYNTKINSLKDESDAKFETVGDVAVISENQKK 93

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           +          ++   A   +  +        +       D   + +      T ++IS+
Sbjct: 94  QMRKTLQNVDPQKLANAKTLQDSINLAVGYSLTKSMRENFDGNDEDIDVNIDETVVMISV 153

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR--DNW 285
            D+    +F+  S     +   +L+++  V+       + I GHTD    +  +   DNW
Sbjct: 154 SDKL---LFNSGSYRVSNKANSLLERLAAVINSEPAIEVMIEGHTDDRTVKQGSYIKDNW 210

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            LS +RA +  + L     V+ +++    G + ++  +A+D     +ANRR  IL+ 
Sbjct: 211 DLSTERATAIIRKLADDYNVAPEKMIAA-GRSSYKPLVANDSNENRAANRRTRILIL 266


>gi|37527138|ref|NP_930482.1| hypothetical protein plu3255 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786572|emb|CAE15629.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 575

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 8/108 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293
            +FD   +     +  VL      +      +  I GHTD++     A  N  LSL RA 
Sbjct: 443 ALFDVGQAKLKAGSTKVLVNALINIRAKPGWMILIAGHTDST---GDATKNQVLSLARAE 499

Query: 294 SAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +     L  S +S      + G         +      +ANRR++I +
Sbjct: 500 AVRDWMLQTSDISPA-CFTVQGKGATSPIATNTTAAGRAANRRVEIRL 546


>gi|308376544|ref|ZP_07439229.2| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
 gi|308350673|gb|EFP39524.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
          Length = 320

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 215 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 271

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 272 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 319


>gi|149277383|ref|ZP_01883524.1| outer membrane protein 3a [Pedobacter sp. BAL39]
 gi|149231616|gb|EDM36994.1| outer membrane protein 3a [Pedobacter sp. BAL39]
          Length = 657

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 13/118 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +++   +     +   L  +  +L  + +  I +  HTD    +  A  N  LS  R
Sbjct: 544 KDVLYEFDKADLTELSKGKLDYLYTILIDNPDIDIELSAHTDN---KGTAEYNMDLSNRR 600

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341
           A S    L+  G+  +R++   G+   +    +            + NRR +  V  +
Sbjct: 601 AQSCLDYLVTKGIPAERMTS-KGYGLTKPVAPNQFSDGKDNPEGRAMNRRTEFKVLKK 657


>gi|46203195|ref|ZP_00208848.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 170

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  SS   P     L K    L   +     I GH D          N+ L   R
Sbjct: 60  DRVFFESDSSDLTPTATATLDKQASWLQRYSRYSFLIEGHADER---GTREYNYSLGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L   G++  R+  +S +   R     +D    S NRR
Sbjct: 117 AQAVLDYLTSRGIAPSRMRTVS-YGKERPVAVCNDISCWSQNRR 159


>gi|312198597|ref|YP_004018658.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
 gi|311229933|gb|ADP82788.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
          Length = 371

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   F   S++        L  +   L   T    + GHTD++     A  N  LSL RA
Sbjct: 265 HPVTFASDSAVLSDRDRAALDLVAAALRAGTAPALVAGHTDST---GPASLNEALSLGRA 321

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +A   L+  GV   R+  + G+   R    +      +ANRR++I+
Sbjct: 322 QAAVGYLVSQGVPAGRLRAV-GYGASRPAADNATPAGRAANRRVEIV 367


>gi|229592294|ref|YP_002874413.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
 gi|126214996|emb|CAM35533.1| OprL protein [Pseudomonas fluorescens]
 gi|229364160|emb|CAY51808.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
          Length = 166

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TDA         N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDAR---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GV+  ++  +S +   R     +     + NRR+++
Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGNDEQSWAQNRRVEL 164


>gi|85709715|ref|ZP_01040780.1| outer membrane protein [Erythrobacter sp. NAP1]
 gi|85688425|gb|EAQ28429.1| outer membrane protein [Erythrobacter sp. NAP1]
          Length = 231

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 17/205 (8%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                +  ++R +           L   +       +              K+  D  ++
Sbjct: 25  DPNTGERKVSRTAIGAGVGGTLGYLLGGVIGGNTARIIGAGIGGSAGAVVGKQFDDQIRE 84

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   L G   D     V     +  IL+ + D      F   S+   P     L  +   
Sbjct: 85  LDEELEGTGVD-----VEEIGDQDAILVRLPDGVT---FASGSATINPGFYDSLNSVANS 136

Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       + + G TD +        N RLS  RA +    L   GV+  R+    G+  
Sbjct: 137 LIQYPNSLVDVYGFTDTT---GSDSLNQRLSEQRAQAVADYLASRGVARSRL-ATRGYGE 192

Query: 318 H----RLKIASDPMNSANRRIDILV 338
                R+K A       NRR++I +
Sbjct: 193 SYDYLRIKTADGVAEPLNRRVEIKI 217


>gi|126733592|ref|ZP_01749339.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
           CCS2]
 gi|126716458|gb|EBA13322.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
           CCS2]
          Length = 173

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F   +S   PE   +L    + L  + +  ++  GH D          N  L   R
Sbjct: 62  DRVLFAVDTSTITPEGQTILDGQAQWLLTNADYRAVIEGHADEQ---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  GV   R+ +++ F   R     + +   + NRR
Sbjct: 119 ANAVREYLVSRGVPSTRL-QVTSFGKERPIAICSEESCYAQNRR 161


>gi|15608039|ref|NP_215414.1| outer membrane protein A OMPA [Mycobacterium tuberculosis H37Rv]
 gi|15840318|ref|NP_335355.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
 gi|31792087|ref|NP_854580.1| outer membrane protein A OMPA [Mycobacterium bovis AF2122/97]
 gi|121636822|ref|YP_977045.1| putative outer membrane protein A ompA [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660677|ref|YP_001282200.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
 gi|148822109|ref|YP_001286863.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
 gi|167967701|ref|ZP_02549978.1| outer membrane protein A ompA [Mycobacterium tuberculosis H37Ra]
 gi|215402698|ref|ZP_03414879.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
 gi|215426166|ref|ZP_03424085.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
 gi|215429757|ref|ZP_03427676.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
 gi|215445042|ref|ZP_03431794.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
 gi|219556764|ref|ZP_03535840.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
 gi|224989293|ref|YP_002643980.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253800076|ref|YP_003033077.1| hypothetical protein TBMG_03089 [Mycobacterium tuberculosis KZN
           1435]
 gi|254231205|ref|ZP_04924532.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
 gi|254363830|ref|ZP_04979876.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549877|ref|ZP_05140324.1| hypothetical protein Mtube_05346 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185796|ref|ZP_05763270.1| hypothetical protein MtubCP_07170 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199919|ref|ZP_05767410.1| hypothetical protein MtubT4_07255 [Mycobacterium tuberculosis T46]
 gi|260204103|ref|ZP_05771594.1| hypothetical protein MtubK8_07315 [Mycobacterium tuberculosis K85]
 gi|289442311|ref|ZP_06432055.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
 gi|289446466|ref|ZP_06436210.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
 gi|289555318|ref|ZP_06444528.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
 gi|289568867|ref|ZP_06449094.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
 gi|289573527|ref|ZP_06453754.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
 gi|289744630|ref|ZP_06504008.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
 gi|289749421|ref|ZP_06508799.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
 gi|289752954|ref|ZP_06512332.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
 gi|289756985|ref|ZP_06516363.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
 gi|294996380|ref|ZP_06802071.1| hypothetical protein Mtub2_18234 [Mycobacterium tuberculosis 210]
 gi|297633418|ref|ZP_06951198.1| hypothetical protein MtubK4_04816 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730403|ref|ZP_06959521.1| hypothetical protein MtubKR_04896 [Mycobacterium tuberculosis KZN
           R506]
 gi|306775025|ref|ZP_07413362.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
 gi|306782060|ref|ZP_07420397.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
 gi|306783573|ref|ZP_07421895.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
 gi|306787937|ref|ZP_07426259.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
 gi|306792274|ref|ZP_07430576.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
 gi|306796673|ref|ZP_07434975.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
 gi|306806741|ref|ZP_07443409.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
 gi|306966938|ref|ZP_07479599.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
 gi|306971133|ref|ZP_07483794.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
 gi|307078861|ref|ZP_07488031.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
 gi|307083420|ref|ZP_07492533.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
 gi|313657730|ref|ZP_07814610.1| hypothetical protein MtubKV_04886 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040011|sp|P65594|Y923_MYCBO RecName: Full=Uncharacterized protein Mb0923
 gi|54042590|sp|P65593|Y899_MYCTU RecName: Full=Uncharacterized protein Rv0899/MT0922
 gi|1314039|emb|CAA97374.1| OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium tuberculosis H37Rv]
 gi|13880481|gb|AAK45169.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
 gi|31617675|emb|CAD93784.1| PROBABLE OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium bovis
           AF2122/97]
 gi|114199356|gb|ABI54278.1| outer membrane protein A [Mycobacterium bovis]
 gi|121492469|emb|CAL70937.1| probable outer membrane protein A ompA [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600264|gb|EAY59274.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
 gi|134149344|gb|EBA41389.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504829|gb|ABQ72638.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
 gi|148720636|gb|ABR05261.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
 gi|224772406|dbj|BAH25212.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253321579|gb|ACT26182.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 1435]
 gi|289415230|gb|EFD12470.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
 gi|289419424|gb|EFD16625.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
 gi|289439950|gb|EFD22443.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
 gi|289537958|gb|EFD42536.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
 gi|289542621|gb|EFD46269.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
 gi|289685158|gb|EFD52646.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
 gi|289690008|gb|EFD57437.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
 gi|289693541|gb|EFD60970.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
 gi|289712549|gb|EFD76561.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
 gi|308216378|gb|EFO75777.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
 gi|308325291|gb|EFP14142.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
 gi|308331576|gb|EFP20427.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
 gi|308335389|gb|EFP24240.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
 gi|308339194|gb|EFP28045.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
 gi|308342931|gb|EFP31782.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
 gi|308346757|gb|EFP35608.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
 gi|308355333|gb|EFP44184.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
 gi|308359272|gb|EFP48123.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
 gi|308363182|gb|EFP52033.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
 gi|308366838|gb|EFP55689.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
 gi|326904881|gb|EGE51814.1| outer membrane protein A ompA [Mycobacterium tuberculosis W-148]
 gi|328459815|gb|AEB05238.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 4207]
          Length = 326

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 221 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 277

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 278 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 325


>gi|94495568|ref|ZP_01302148.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
 gi|94424956|gb|EAT09977.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
          Length = 290

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 75/272 (27%), Gaps = 9/272 (3%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           T              +  +      +    +      I      +   +++      +N+
Sbjct: 18  TGPMASPLAAQDAPPADLSATITEPEPAPAEAVKGPTIEGFISARSGDQMQVTGEDGANN 77

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA- 196
             +      +           ++   +  +N            + ++A +   + +DL  
Sbjct: 78  VVAIGEATVVRASGGFLGLGRETLGPDALLNGLPVSVETVQGAQGLVATRIALKNKDLKT 137

Query: 197 -KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I +  +   A+              I    +       FD   +   P+    L   
Sbjct: 138 ASMIRNGTAQGFAEQSAATEALRGRVADIDQYNVKATTNVNFDTGKTALSPQAKSDLCAT 197

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKIS 313
                     +  + G+TD++        N  LS  RA      L +       R+   +
Sbjct: 198 AASAEQMDNALLLVVGYTDST---GPEEYNQMLSEKRAGRVVNYLQQHCNWKPYRMLTPT 254

Query: 314 GFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
           G +  +   ++D     + NRR+ + +   +G
Sbjct: 255 GMSEAQPIASNDTEQGKAENRRVSVNILVSKG 286


>gi|163745646|ref|ZP_02153006.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
 gi|161382464|gb|EDQ06873.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
          Length = 641

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 90/315 (28%), Gaps = 19/315 (6%)

Query: 35  IVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           I +AD  +T+L A          TD D+   +         ++   +  +   ++P    
Sbjct: 300 ISFADADITLLAA--------PGTDSDSFDRVVGELENALPDVFALTAKLPKVEDPNAGP 351

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
            +    LS +  +         G  +    Y +       +  + + +    +       
Sbjct: 352 PEFTATLSPEGQVQLRGRLTTEGLRDLADSYAKSHFGSSNVYTAARLDETLPADWATRVL 411

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL--QDLAKKISSTLSGLVADNI 211
                 ++    S+    +      +  K  A      L    L +    ++     + +
Sbjct: 412 TGLEAMASLANGSVTVTPDRLEVTGNTGKKEANTTVASLLADKLGESADYSIDITYQEKL 471

Query: 212 VKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
                  T       I  I       F+  ++      +  +  I EVL    +  + I+
Sbjct: 472 DPIAGLPTPEECEAEIGEILTIGKITFEPGNATIDASALGTMDDIAEVLKRCGDIPLEIQ 531

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+TD+         N  LS  RA S    L    V         G+        +     
Sbjct: 532 GYTDSQ---GRETMNLSLSQSRAESVLNELRARRVLTSSFLA-KGYGEENPIADNQTEEG 587

Query: 330 A--NRRIDILVEDRQ 342
              NRRI+  +   Q
Sbjct: 588 REANRRIEFRLIQAQ 602


>gi|90023231|ref|YP_529058.1| HAD family hydrolase [Saccharophagus degradans 2-40]
 gi|89952831|gb|ABD82846.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 380

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS+  PE    ++K+ + +A     + +  GHTD       A  N  LS  RA + 
Sbjct: 269 FDSNSSVVKPEYFAEIRKVADFMAQYENSVVVIEGHTDTR---GAAAYNKSLSQKRADAV 325

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
             VL+       R     G+   +            ANRR+
Sbjct: 326 AAVLVSEMNVAKRRVTSVGYGEEQPIADESTREGLVANRRV 366


>gi|163755848|ref|ZP_02162966.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
 gi|161324369|gb|EDP95700.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
          Length = 648

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 18/165 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIP 244
           R        +  L     D  ++ V     +  +   I D     +      FD   S  
Sbjct: 488 RASKKDYNSAEALLPKQEDPGLREVTLLLEKEEVPFEIGDDLAVTLNIPIIYFDFDKSNI 547

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+    L K+  V+       I +R HTD+         N  LS  R  S    ++  G
Sbjct: 548 RPDAAAELAKVIAVMKKYPTLKIDVRSHTDSR---GSDSYNMALSQRRNQSTRDYIISKG 604

Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
           +   R+    G+   R           S+  +  NRR + +V ++
Sbjct: 605 IDASRL-TGRGYGETRHVNKCSNGVKCSEEEHQLNRRSEFIVVEK 648


>gi|114797292|ref|YP_760148.1| OmpA family membrane protein [Hyphomonas neptunium ATCC 15444]
 gi|114737466|gb|ABI75591.1| membrane protein, OmpA family [Hyphomonas neptunium ATCC 15444]
          Length = 544

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
           +FD       PE    L ++   L      I +   GHTD++     A  N  LS +RA 
Sbjct: 431 LFDVGKYEIKPEAESALAELAAQLQTYGADIRVTVEGHTDST---GSAASNQTLSENRAR 487

Query: 294 SAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE-DRQG 343
           S +  L      V ED    I G+   R    +      + NRR+DIL+   ++G
Sbjct: 488 SVWDNLSGKISPVPED--VTIRGYGASRPVADNATEEGRAENRRVDILILPGKKG 540


>gi|213964216|ref|ZP_03392450.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
           Capno]
 gi|213953135|gb|EEB64483.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
           Capno]
          Length = 919

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   S      +   L+ I  +L    +  I + G+TD +     A  N +LS  R
Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSAEGNLKLSERR 867

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341
           A S    L+  G ++ ++S   G+         +D     + NRRIDI +  +
Sbjct: 868 ANSVLNKLVALGANKAQLSA-QGYGQEHPVCPANDTDECKAKNRRIDIRLTAK 919


>gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis]
          Length = 385

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +++ +           V          ++        +F   S+     +   L
Sbjct: 230 DDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTTKYDLGGILFANDSAEIRAGSFADL 289

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           +K+ + L    +   S++GH         A  N +LS  RA +    L K  G+S  RIS
Sbjct: 290 EKLADHLTKYPQHTVSVQGHASNV---GKAEYNMKLSERRAVAVASALNKKYGISISRIS 346

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            + G+   +  +      +   NRRI+ +V   +
Sbjct: 347 SV-GYGVTKPVMQGSSAEANRVNRRIEAIVTGTE 379


>gi|114564063|ref|YP_751577.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114335356|gb|ABI72738.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +++ +           V          ++        +F   S+     +   L
Sbjct: 221 DDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTTKYDLGGILFANDSAEIRAGSFADL 280

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           +K+ + L    +   S++GH         A  N +LS  RA +    L K  G+S  RIS
Sbjct: 281 EKLADHLTKYPQHTVSVQGHASNV---GKAEYNMKLSERRAVAVASALNKKYGISISRIS 337

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            + G+   +  +      +   NRRI+ +V   +
Sbjct: 338 SV-GYGVTKPVMQGSSAEANRVNRRIEAIVTGTE 370


>gi|134292850|ref|YP_001116586.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134136007|gb|ABO57121.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 226

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 6/162 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            + K         +  +  A  R      L +++ + L+ L A      +       GI 
Sbjct: 52  QLAKYNALDARYQTLARHDAAARGTAAVTLPERVPAWLASLDALKTAGRIALVRAPHGIE 111

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARD 283
           I I  +    +F+   +  LP+   VL +I   L+   +  I + GHTD  P  N     
Sbjct: 112 IGIDAK---VLFNVGDARLLPDAAPVLTQIARALSEHASGDILVEGHTDNVPIANAKYES 168

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           NW LS  RA S  + L + GV+  R++ I G A  +  +  D
Sbjct: 169 NWELSSARAGSVVRYLAERGVAPHRLAAI-GRADTQPLVTGD 209



 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
            +      G W I YAD +T LM  FL ++++ 
Sbjct: 19 DDEGDDAQTGRWLISYADLITTLMVLFLALYVLQ 52


>gi|170695384|ref|ZP_02886530.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170139784|gb|EDT07966.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 248

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +    F   S+   P     L          +   +++ G+TD +        N  LS  
Sbjct: 140 QGNANFATDSATLSPIAKENLDHFMAANKGANLRRVTVTGYTDKT---GSEAHNLALSKA 196

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  Q L   G+  ++     G        ++        NRR+D+ V
Sbjct: 197 RAEAVVQYLRDGGLEGEQFVA-QGLGSADPVASNATAEGRSQNRRVDVRV 245


>gi|260777706|ref|ZP_05886599.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605719|gb|EEX32004.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 205

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280
             I++ + D      F+  SS+  P+++  L  +G  LA    +  +  GH D++     
Sbjct: 88  NHIMVKLTDTIK---FNTGSSMVKPDSMYWLDMMGRYLATQPGIDIVIDGHADST---GA 141

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  LS+ RA +  + L+ + V+ + I    G+  +    ++        NRR+++L
Sbjct: 142 PTFNDSLSMKRAKAVKKQLVSNNVAMNSIYT-RGYGEYVPACSNTTSAGKACNRRVEVL 199


>gi|162456085|ref|YP_001618452.1| OmpA domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161166667|emb|CAN97972.1| OmpA domain protein [Sorangium cellulosum 'So ce 56']
          Length = 210

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F+   +    E+  +L ++   +   T +  I   GH  A         N +LS  RA +
Sbjct: 95  FEYDQATIRTESHSLLDEVVGTIKKHTHIKKIAIEGHASAE---GSEDHNLKLSDRRAKA 151

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             + L+  G++   +    GF   +    +D       NRR++  + +
Sbjct: 152 VMKYLVDHGIAAG-MLTAKGFGKSKPIADNDTPEGREKNRRVEFNIVE 198


>gi|332528553|ref|ZP_08404541.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
           19624]
 gi|332042064|gb|EGI78402.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
           19624]
          Length = 189

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 7/140 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +      A                  SI D      FD  SS   PE   V++     + 
Sbjct: 52  AAPEAKPAQASAPTPAAAVPVAKPADSIADVAKLVYFDYDSSAIKPEFRAVIEAHARFMQ 111

Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +     +I GH D          N  L   RA +  Q+L+  GV+  +I  IS F   +
Sbjct: 112 SNPARSVTIAGHADER---GGTEYNLALGQRRADAVRQMLVLLGVNSSQIETIS-FGKEK 167

Query: 320 LKI--ASDPMNSANRRIDIL 337
             +  +++   + NRR +I 
Sbjct: 168 PAVRGSNEAAWAKNRRAEIT 187


>gi|296536326|ref|ZP_06898436.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296263348|gb|EFH09863.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 368

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   +        ++ +  +  +      I + GH D        + N RLS  RA 
Sbjct: 265 VFFDFDRADLTDRARQIIAEAAQNSSRVQATRIEVAGHADR---AGSPQYNQRLSQRRAD 321

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +    L++ GV+   I  +  F   R  + +        NRR++I++ 
Sbjct: 322 AVAAELVRLGVARSAI-TVQAFGESRPLVPTADGVREPQNRRVEIVLR 368


>gi|261251125|ref|ZP_05943699.1| protein F-related protein [Vibrio orientalis CIP 102891]
 gi|260937998|gb|EEX93986.1| protein F-related protein [Vibrio orientalis CIP 102891]
          Length = 205

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 10/119 (8%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280
             +++ + D      F+  SS   P++   L  +G  LA    +  +  GH D++     
Sbjct: 88  NHVMVKLKDTIK---FNTGSSNVSPDSQYWLDMMGSYLATQPGIDIVIDGHADST---GA 141

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  LS+ RA +  + L+++ V+ D I    G+  +    ++        NRR+++L
Sbjct: 142 PTFNDGLSMKRASAVKRQLVRNNVAMDSIFT-RGYGEYVPACSNKTKAGKACNRRVEVL 199


>gi|172064633|ref|YP_001812283.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171998118|gb|ACB69034.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 248

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F    +   PE    L  + E    +    ++I G+TDA+     A  N  LS  R
Sbjct: 141 GDALFAPGQATLTPEARKSLNALMEQQQGTFFSRVTIIGYTDAT---GSAALNDVLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+  D + ++ G    +   +++     + NRR++I +  +
Sbjct: 198 AQAVASYLRTRGLKYD-VIEVEGRGSAQSVASNETAQGRAKNRRVEIQLVAK 248


>gi|284037429|ref|YP_003387359.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283816722|gb|ADB38560.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 704

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
               +F +S    LP     L K+ +++     + + I GHTD          N +L+ D
Sbjct: 596 MREVLFQQSQFTLLPGADTELDKMADMMETHPTMELLIEGHTDNQ---GDWEPNMKLAED 652

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           R     + L+K G+  +RI     +   +   +++       NRR++  +  
Sbjct: 653 RVRVVKEYLLKKGIKPERIQT-KAWGPSKPIASNETEEKRKLNRRVEFTILK 703


>gi|330903399|gb|EGH33971.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
          str. M301072PT]
          Length = 50

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD 59
          EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W++++   
Sbjct: 2  ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATP 50


>gi|119385422|ref|YP_916478.1| putative chemotaxis MotB protein [Paracoccus denitrificans PD1222]
 gi|119375189|gb|ABL70782.1| putative chemotaxis MotB protein [Paracoccus denitrificans PD1222]
          Length = 266

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 8/200 (4%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
             TR    G    +  D E +  K        L+             +D+A+ I   L+G
Sbjct: 70  QSTRSGHDGPFGGEVQDAETNSGKGAGASRDSLAARTQDGRDTG--FEDMARHIQDQLTG 127

Query: 206 LVAD-----NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             A+     N+++ V+   T  G++I + D  + P+F   S+ P P    +   +  VL 
Sbjct: 128 SGAESLQKVNLLRHVVTRMTDEGLVIELTDLMDEPLFVGDSAQPTPAMKELAGILSGVLG 187

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                I++ GH  A P   I    W LS  RA++   +L  +G    RI +++ FA  R 
Sbjct: 188 RVRNEIALTGHVRAYPEMLIQSPVWALSDARAHALRNLLEGAGFDTTRIQRVTAFADRRN 247

Query: 321 KIASDPMNSANRRIDILVED 340
           +  + PM+  N RI++++  
Sbjct: 248 RSVN-PMDPDNNRIEVILLR 266



 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 6/184 (3%)

Query: 7   KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
                   IIIKK     D  ++ G+WK+ YADF+T +MAFFL+MW++NAT +  ++ + 
Sbjct: 2   AGNGGSAPIIIKKVQGGGDAGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRQGLA 61

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
            YFNP       +        + P        + +  +    +   L   + + +     
Sbjct: 62  DYFNPTLIQSTRSGH------DGPFGGEVQDAETNSGKGAGASRDSLAARTQDGRDTGFE 115

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
                     +         +         +     + +  +  +       S +   AM
Sbjct: 116 DMARHIQDQLTGSGAESLQKVNLLRHVVTRMTDEGLVIELTDLMDEPLFVGDSAQPTPAM 175

Query: 187 KRKK 190
           K   
Sbjct: 176 KELA 179


>gi|325279770|ref|YP_004252312.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324311579|gb|ADY32132.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 625

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD       PE+   L+++   L  + E  I I GHTD +      + N+RLS +RA+ 
Sbjct: 523 FFDVDDYRLRPESYPELRQLVVFLKQNPEVKIEISGHTDNT---GSDQHNYRLSENRAFE 579

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            Y+ L  + + ++R+ +  G+   R    +D       NRR +I V 
Sbjct: 580 VYKYLFLNHIQKERM-EYKGYGKDRPLRTNDTEEGRKENRRTEIRVR 625


>gi|313681736|ref|YP_004059474.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154596|gb|ADR33274.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
          Length = 282

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 13/254 (5%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
           PE  +  K  +   +  +                 ++++                  +T 
Sbjct: 10  PECPAGEKWAVPTADFFSLLLALFIALFAIASVNKEKIKAVKEEFVKIYDYAPAPQEITP 69

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
             +   +   + D   +                    K  +   +  +KI   L      
Sbjct: 70  VVDMVSENNPTPDATANAAGSAPVTDGGSLLVGAPPTKSTEAASEAIQKIQQDLKNASMG 129

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VIS 267
           +       +     +  SI  +          +I   E  + L+++ +++        IS
Sbjct: 130 SGPLDQSMDGVLLKLPTSIPFKGANA------TIDNEELHLFLRRVTDIINTLPPTVDIS 183

Query: 268 IRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           IRG+TD  P       +DN  LS  RA +  + L+++GV+ +R+S   GF   +    + 
Sbjct: 184 IRGYTDNQPLPPGAGYKDNIELSSRRAETVMRELIRNGVAPERLSTA-GFGAAKPVAENT 242

Query: 326 PM--NSANRRIDIL 337
                + NRR++  
Sbjct: 243 TEENRAKNRRVEFY 256


>gi|290559940|pdb|2KGW|A Chain A, Solution Structure Of The Carboxy-Terminal Domain Of
           Ompatb, A Pore Forming Protein From Mycobacterium
           Tuberculosis
          Length = 129

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 24  GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 80

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 81  AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 128


>gi|83312309|ref|YP_422573.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82947150|dbj|BAE52014.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 161

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   S    +    L K    L        ++ GH D          N  L   R
Sbjct: 56  DRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADER---GTREYNLALGEKR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L  +G++  R+  +S +   R     +++   S NRR
Sbjct: 113 ANAVASYLKSAGIAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155


>gi|146301711|ref|YP_001196302.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146156129|gb|ABQ06983.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 642

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 16/162 (9%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLP 246
           ++      ++T   +V                 LI   D     +     FD   S    
Sbjct: 483 IEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDVRY 542

Query: 247 ETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           +  + L K+  +++    V I I  HTD+       + N  LS  RA +    ++  G++
Sbjct: 543 DAAIELNKVVLLMSQYPSVVIKIESHTDSR---ANDQYNLELSDRRAKATRDYIISQGIA 599

Query: 306 EDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            +RI    G+   +L          ++  +  NRR + ++  
Sbjct: 600 PERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIITK 641


>gi|326572627|gb|EGE22616.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis CO72]
          Length = 186

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S    P+   +L +  + L  +    + + GHTD          N  L   
Sbjct: 81  PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 137

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +    L+  G+++  +  IS F   R      ++   S NRR ++
Sbjct: 138 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 184


>gi|296115020|ref|ZP_06833663.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
 gi|295978438|gb|EFG85173.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
          Length = 392

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD---ASPFRNIARDNWRLSLD 290
             FD   +        ++ +  +   H     I + G+TD   A P     + N  LSL 
Sbjct: 283 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNMGLSLR 342

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV  + I  I G+      + +  D     NRR++I++
Sbjct: 343 RANSVKAELIRDGVPANAID-IQGYGEAHPLVPTGPDTREPQNRRVEIIL 391


>gi|297183087|gb|ADI19231.1| flagellar motor protein [uncultured delta proteobacterium
           HF0200_14D13]
          Length = 211

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 18/133 (13%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRNIAR- 282
           I+      +F    +      I VL    + +    E      ++ GH D  P       
Sbjct: 65  IVSLPQDFLFRSGDAELKAGAIRVLTPFFQKIRDLPEHQGDLVTVEGHADNLPIHTDKYP 124

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------S-------DPMNS 329
            NW LS  RA +   +L+           ++G++  R K++      +       +    
Sbjct: 125 SNWELSTARATNVATMLINRMGYASDTLSVNGYSDTRPKVSYKDARGNALRGTALEVARR 184

Query: 330 ANRRIDILVEDRQ 342
            NRR++I++    
Sbjct: 185 TNRRVEIVITTPP 197



 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 7/40 (17%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA 56
          ++++          G+W I +AD MT++  FF+++ +++ 
Sbjct: 1  MRRR-------EGGGAWVITFADLMTLMFCFFVLLTVLST 33


>gi|300310091|ref|YP_003774183.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Herbaspirillum seropedicae SmR1]
 gi|300072876|gb|ADJ62275.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Herbaspirillum seropedicae SmR1]
          Length = 271

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
              +                 +   +      +  + + Q +A  ++S+L+     N   
Sbjct: 89  NNHVQSLISPNLKAVSRGQLKIDGTTVSITGEVANEAQRQQIASDMASSLNSSYTVNNG- 147

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHT 272
            +   T+  G+L + +  R    F+   +   PE   +L +I   +L      + I G+T
Sbjct: 148 -LRVSTSEQGLLDNALANR-VVSFESGQATLTPEGKRILDEIAATMLKLKGRHVEIIGNT 205

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D      +   N  LSL RA +    L   GV E  +   SG    R   ++      + 
Sbjct: 206 DNE---GLRASNISLSLARADAVKAYLGAKGVDES-LLSTSGQGPDRPVASNATAEGRAK 261

Query: 331 NRRIDILV 338
           NRRI+  +
Sbjct: 262 NRRIEFRI 269


>gi|300727039|ref|ZP_07060458.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
 gi|299775583|gb|EFI72174.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
          Length = 229

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 8/140 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            + ++  V++  V+ V        I ++         FD   S         L K    L
Sbjct: 81  KAEIAQQVSNAKVEEVTDANGLKAIKVTFDSGLQ---FDLGKSTLKSAAKNDLAKFASTL 137

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            +     + I+G+TDA+        N  LS  RA +    L+  GVS  +   ++G+A  
Sbjct: 138 KNDPMLAVDIQGYTDAT---GGDAINLPLSDKRAKAVSSYLVSQGVSSSQFKNVAGYASA 194

Query: 319 RLKIASDPMNSANRRIDILV 338
              + +  +   NRR+++ +
Sbjct: 195 NPIV-NATVAPENRRVEVYL 213


>gi|207724483|ref|YP_002254880.1| outer membrane protein [Ralstonia solanacearum MolK2]
 gi|206589704|emb|CAQ36665.1| outer membrane protein [Ralstonia solanacearum MolK2]
          Length = 277

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             D +           +  G     +  +              +   +  +         
Sbjct: 34  PGDPAPATAANPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93

Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                K    +          +          ++ + + Q LA  +++TL          
Sbjct: 94  TGNVQKILSPQIKQVNRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
            V   + ++ +  ++ ++     F+  S+   P+   +L ++  VL         I GHT
Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D          N  LS  RA +    L+  G     ++ I G    +   A+  D   S 
Sbjct: 212 DN---SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 267

Query: 331 NRRIDI 336
           NRRI+ 
Sbjct: 268 NRRIEF 273


>gi|259417968|ref|ZP_05741887.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346874|gb|EEW58688.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 207

 Score = 88.5 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+        VL    + +    E    + GHTDA         N RL L RA +A
Sbjct: 66  FDFDSARLDGNARQVLDAQADWIRQFPEVRFRVYGHTDAV---GSQSYNKRLGLRRARAA 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G++ +R+  ++ F   +  + +D     NRR
Sbjct: 123 VNYLVARGIARNRLEAVASFGETQPLVLTDQRERRNRR 160


>gi|253701635|ref|YP_003022824.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251776485|gb|ACT19066.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 432

 Score = 88.5 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   P+    L+ + + L        +  GHTD          N +LS  RA   
Sbjct: 326 FDTNKADLKPQYRAELKALADFLNEFPNATGVIEGHTDNV---GPKALNMKLSQLRADKI 382

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
              L+K  G++ +RI  I G+   +   ++      + NRRI+
Sbjct: 383 RNSLIKEFGIAPERIKAI-GYGPAKPVASNKDKAGKAKNRRIE 424


>gi|319763679|ref|YP_004127616.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|317118240|gb|ADV00729.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
          Length = 217

 Score = 88.5 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 26/178 (14%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +      L  E+    ++ +RL  L + ++  L+          +             
Sbjct: 43  GMQMELAERLKTEQRQRAEQARRLTTLEQALAGPLAAGRVTLQDGRIGI----------- 91

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN----- 279
                + +F  +S    PE   +L+     +   L    E++ + G TD  P R      
Sbjct: 92  ---SGSVLFAFNSDELQPEGRQLLRSLSAPLAAYLRERGEILMVSGFTDDRPMRGGGGNA 148

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
              DNW LS  RA +  + L+  G+   ++   + F   +   ++      + NRR++
Sbjct: 149 RFADNWELSAQRALTVTRALIDEGIPSAQVFAAA-FGAEQAVASNADAEGRARNRRVE 205


>gi|289207478|ref|YP_003459544.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288943109|gb|ADC70808.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 213

 Score = 88.5 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLD 290
             +FD  S+   PE    L+++   L         + + GHT        A  N  LS  
Sbjct: 101 QALFDFDSADLRPEGRDALRELARSLTADDVEYSSVLVEGHTCTI---GPADYNQGLSER 157

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S    L   GV ED I  + G+   R    +        NRR+++  + RQ
Sbjct: 158 RAQSVADFLASEGVREDDIRTV-GYGEDRPTADNSTREGREANRRVEVTSDVRQ 210


>gi|298293019|ref|YP_003694958.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
 gi|296929530|gb|ADH90339.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
          Length = 344

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 21/272 (7%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
              S       ++   + +   +               E       ++  +         
Sbjct: 74  ANDSESESQMGALRASLLRLEQERDALQAAATAVASPEEIAAAQARSADLARELGQEKDA 133

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            ++    +        ++ ++       L   +    + + RL DL ++++  L+  V +
Sbjct: 134 AAQAAAQIAILNQQIAALRRQIAALEQALDISEQKDKESQSRLADLGRRLNVALAQRVQE 193

Query: 210 NIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL- 259
                  F      IL    D R         +   FD++S+   P+ +  L K+ E L 
Sbjct: 194 LTRYRSEFFGRLRAILGDRPDVRIVGDRFVFQSEIFFDRASADLRPDAMPALDKLAEALV 253

Query: 260 -------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                  +  + V+ + GHTD  P        NW+LS  R+ +  Q L   GVS   +  
Sbjct: 254 ALEKEIPSDISWVLRVDGHTDNRPIATPLFPSNWQLSAARSIAVVQYLAGKGVSPQHLVA 313

Query: 312 ISGFAHHRLK--IASDPMNSANRRIDILVEDR 341
             GF  ++      SD   + NRRI++ + +R
Sbjct: 314 A-GFGEYQPIDDADSDDARARNRRIELKLTER 344


>gi|114046457|ref|YP_737007.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113887899|gb|ABI41950.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 485

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L  +      + GHTD    +     N  LS  RA +
Sbjct: 378 LFDYDSERLLPESKPVLEVLASYLKQNPTLSFYVVGHTDD---KGERSYNQSLSERRAAT 434

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + L     +   +++   G   +    ++        NRR+++++   +
Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484


>gi|300313316|ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1]
 gi|300076101|gb|ADJ65500.1| lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 18/251 (7%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK----- 153
             S  +++         G            +    L+  ++       + + S       
Sbjct: 22  TTSDAQNLAPPVATPAPGQVLVTGTVPDEASKAAALTRLRELYGHDRVVDQISVGPVVLP 81

Query: 154 ---GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                 + K         ++    +   +      +  + + Q +A  ++++L+     N
Sbjct: 82  ANWNNHVQKLISPNLKAVRQGQLKIDGTNVSISGEVSHEAQRQQIASDMATSLNSSYIIN 141

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIR 269
               +   T+  G+L + +  R    F+   +   PE   +L +I   +L      + I 
Sbjct: 142 NG--LRVSTSEQGVLDNTLANR-VVSFESGRATLTPEGKRILDEIAATMLQLKGRRVEII 198

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327
           G+TD      +   N  LSL RA +    L   GV +  +   SG    R   ++     
Sbjct: 199 GNTDNE---GLRASNISLSLARADAVKAYLSTKGVDDS-LLTTSGQGPDRPVASNATSEG 254

Query: 328 NSANRRIDILV 338
            + NRRI+  +
Sbjct: 255 RARNRRIEFRI 265


>gi|330993347|ref|ZP_08317282.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
 gi|329759377|gb|EGG75886.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
          Length = 407

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD---ASPFRNIARDNWRLSLD 290
             FD   +        ++ +  +   H     I + G+TD   A P     + N  LSL 
Sbjct: 298 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNLGLSLR 357

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV    I  + G+   R  + +  D     NRR++I++
Sbjct: 358 RADSVKAELIRDGVPASAIG-VQGYGEARPLVPTGPDTREPQNRRVEIIL 406


>gi|159045040|ref|YP_001533834.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
 gi|157912800|gb|ABV94233.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
          Length = 240

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 5/132 (3%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISI 268
           +++ +L         I+      T +FD  S+    E    ++ I E L  +       +
Sbjct: 17  LIRLILAPAVLVWGAIAQAQDLGTVLFDFDSASLDAEAATQVRAIAEALEATPSYKPTIV 76

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G+TDA         N  L   RA +    L   GV   RI  I+      L +A     
Sbjct: 77  VGYTDAV---GSTGYNLALGQRRAQTVADALTAQGVPVSRIGSIASRGESDLVVAVATAE 133

Query: 329 SANRRIDILVED 340
             NRR+++ ++D
Sbjct: 134 RRNRRVNVALDD 145


>gi|237706550|ref|ZP_04537031.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
 gi|226899590|gb|EEH85849.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
          Length = 146

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 5/107 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F     +    T V++  +  + A    +I + G+TDA+      + N +LSL RA +  
Sbjct: 35  FATGVRLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVR 91

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             ++++         + G    +    +D     + NRR++I +  R
Sbjct: 92  NWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPR 138


>gi|146301218|ref|YP_001195809.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146155636|gb|ABQ06490.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 645

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 11/119 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD       P+ I  L K+  ++     +   I  HTD+         N +LS 
Sbjct: 530 DVQPIYFDYDKYDITPKAIEELTKVVFIMQKFPNIKIKIESHTDSR---GKDSYNLKLSD 586

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
           +RA S    ++  G+   RI    G+   RL          ++  +  NRR D ++  +
Sbjct: 587 NRAKSTRDYILSQGIDASRIESAIGYGESRLINKCKNGVKCTEEEHLLNRRSDFIIIQK 645


>gi|294146707|ref|YP_003559373.1| OmpA-family protein [Sphingobium japonicum UT26S]
 gi|292677124|dbj|BAI98641.1| OmpA-family protein [Sphingobium japonicum UT26S]
          Length = 288

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 71/261 (27%), Gaps = 8/261 (3%)

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           Q     ++       +    T       I S     + Q    +      +       ++
Sbjct: 28  QTQEAPAADVSATAYLPAEKTAGPEIKGIISARSGDKMQVTAADGTKSVIAINDATKISA 87

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                   ++   +T L   +                    + K L+  A  I +  +  
Sbjct: 88  SKGLFGLNRNRLAATSLLNGLPVTVKTLQSGEGLVASQINLQNKDLK-TASMIHNGTAQG 146

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
             +              I    +       FD   ++   +    L          +  +
Sbjct: 147 FEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQAKNDLCATAATAEGMSNAL 206

Query: 267 S-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             + G+TD++        N  LS  RA      L ++ G    R+   +G A      ++
Sbjct: 207 LLVVGYTDST---GDDEFNQELSEKRAGRVVNYLQQACGWKPYRMLTPTGMAEADPVASN 263

Query: 325 DP--MNSANRRIDILVEDRQG 343
           D     + NRR+ + +   +G
Sbjct: 264 DTIEGKAQNRRVAVNILVSKG 284


>gi|262066137|ref|ZP_06025749.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291380232|gb|EFE87750.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 93

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +L  + + +  +   +++ GHTD+       + N  LS  RA +    L++ G++E+
Sbjct: 1   YFEMLNNLKDFIEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEE 57

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           RI  I           ++       NRR++  +  R
Sbjct: 58  RIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 93


>gi|325920959|ref|ZP_08182848.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325548579|gb|EGD19544.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 400

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 13/116 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD   +   P+   VL  +   L   +T+ + +RGHTDA   +     N  LS  
Sbjct: 289 NERILFDFDKAGIRPDAARVLDVLAAALGKVNTKDMQVRGHTDA---KGSNAYNQALSER 345

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339
           RA +    L   G ++   +   G+   +    +      +P     NRR++I + 
Sbjct: 346 RADAVLAALRTRGAAQS--AGAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399


>gi|254284085|ref|ZP_04959053.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
           NOR51-B]
 gi|219680288|gb|EED36637.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
           NOR51-B]
          Length = 180

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283
           +  + +   +   F   SS     + + +     +L  S E I + GHTD          
Sbjct: 69  LKDAAMAAGSVFYFAFDSSELNDASRMAIDAHIALLLVSDESIRLEGHTDER---GTREY 125

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           N  L   RA +    ++ +GV   RI  IS +         + +   S NRR+++
Sbjct: 126 NLALGERRANAVRDYMVANGVPSYRIETIS-YGEENPIAFGSGEANWSENRRVEL 179


>gi|126662535|ref|ZP_01733534.1| OmpA family protein [Flavobacteria bacterium BAL38]
 gi|126625914|gb|EAZ96603.1| OmpA family protein [Flavobacteria bacterium BAL38]
          Length = 621

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    +V + ++  ++   T   +++          F+ + S    +    L K+  V+
Sbjct: 485 KAENEQVVVEALLNPIIPIITEKEVILQ------PIFFEFNKSNITADGAAELDKLVAVM 538

Query: 260 AHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               E++     HTD+         N +LS  RA S  Q L+  GV+++RI    GF   
Sbjct: 539 NEYPEMVIFAKSHTDSR---GSDSYNIKLSDRRAKSTVQYLISKGVAKERI-SGQGFGES 594

Query: 319 RLKIA----SDPMNSANRRIDILVEDR 341
             K+A    ++  ++ NRR + L+  +
Sbjct: 595 EPKVACKSCTEEEHAQNRRSEFLIVKK 621


>gi|94500541|ref|ZP_01307072.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
 gi|94427331|gb|EAT12310.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
          Length = 336

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 2/210 (0%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             +   +  K       + G       ++  S   +    L     E       + RL+ 
Sbjct: 64  DPAAYEDGNKVPSKWVIDLGGSPSVQDNVAVSETVDPTKVLQAEEIESAAEAIERARLES 123

Query: 195 LA-KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           L  + +    +          +  + TR G+ I I+D+ N PMF+  SS        +L 
Sbjct: 124 LQSEVMDKINASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAEDILY 183

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++  +L      ISI GHTD+S   N     NW LS  RA +A + L  +G+  ++I+++
Sbjct: 184 EMAPILQAVPNRISITGHTDSSGSANPWDTGNWELSAGRANAARRALADAGLDSEKIAQV 243

Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            G          DP +  NRRI I+V +++
Sbjct: 244 VGMGDKAHFNIEDPTDPVNRRIAIVVLNKR 273



 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 1/197 (0%)

Query: 8   NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           ++ + Q IIIK+        +  G+WK+  ADF   +MA FL++W+IN+++ +  +A+  
Sbjct: 2   DKFDQQQIIIKRVKKGGHGHH-GGAWKVALADFAMAMMALFLILWLINSSNQEEIEAVAG 60

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YFN                 +     S        +       +  +   +  +   +  
Sbjct: 61  YFNDPAAYEDGNKVPSKWVIDLGGSPSVQDNVAVSETVDPTKVLQAEEIESAAEAIERAR 120

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
             ++      + +     +  +D  K     +   ++         F P  S+ K  A  
Sbjct: 121 LESLQSEVMDKINASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAED 180

Query: 188 RKKRLQDLAKKISSTLS 204
               +  + + + + +S
Sbjct: 181 ILYEMAPILQAVPNRIS 197


>gi|39937842|ref|NP_950118.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           CGA009]
 gi|192293627|ref|YP_001994232.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|39651702|emb|CAE30224.1| OmpA/MotB domain [Rhodopseudomonas palustris CGA009]
 gi|192287376|gb|ACF03757.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 464

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S+    ++  +L ++ E         I + GHTD+         N  LS  RA   
Sbjct: 363 FESASASIDKDSAALLDRLIETAMRCPNAKIEVAGHTDSD---GDPAFNQSLSEKRAREV 419

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
              ++++G+S +R+    G+        +D     + NRRID +V 
Sbjct: 420 VDYMVRAGLSPERLQAF-GYGSKIPVAGNDTDAGKAKNRRIDFVVR 464


>gi|153833252|ref|ZP_01985919.1| outer membrane protein [Vibrio harveyi HY01]
 gi|148870523|gb|EDL69438.1| outer membrane protein [Vibrio harveyi HY01]
          Length = 216

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 11/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239
           A  R+  LQ   +  SS L   +A+    G+      T I      Q++  +     F  
Sbjct: 50  AQHRQGFLQIEQQSESSKLRQRLAEESKLGLDKSGCMTWISNQNNHQQSDGLVARLHFGF 109

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             S   P     L ++   L+     I++ GHTD+   +     N  L L RA +  +VL
Sbjct: 110 DQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDS---KGSEGYNQELGLQRALTTSKVL 166

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              GV   RI  +      +   ++      + NRR ++ V
Sbjct: 167 STDGVERTRIV-VRSLGETQPIASNSTVEGRAQNRRSEVWV 206


>gi|332528097|ref|ZP_08404128.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
 gi|332112668|gb|EGJ12461.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
          Length = 215

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 25/174 (14%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                L  E        +R + L   ++  L+          +                 
Sbjct: 45  DLAERLRAEVQQRQAEAQRREALEHALAVPLAAGRVTLAGGRIGI--------------S 90

Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFR----NIARDN 284
              +F  +S+   PE   +L+     +   L+   EV+ + G TD    R        DN
Sbjct: 91  GNVLFAFNSAELQPEGRQLLKSLAGPLAAYLSARDEVLMVSGFTDDRQVRDGGRARFADN 150

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           W LS  RA +  + L++ GV    +   + F   +   ++        NRR++I
Sbjct: 151 WELSAQRALTVTRALIEDGVPSSAVFAAA-FGAEQPVASNADAAGRALNRRVEI 203


>gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155]
          Length = 333

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 9/128 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR---GHT 272
                 +   ++   +    ++   ++    + I  L ++ EVL    +        GH 
Sbjct: 198 TVIVETSPQTLTFSSKSMNVIWGFDATKLSHDFIEQLAEVVEVLNTYPQARVAVLAVGHA 257

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330
           D+         N  LS  RA +    L++ GVS  +I ++ G         +      + 
Sbjct: 258 DSI---GSEAYNQALSEKRAQTVANKLLELGVSPAQI-EVQGEGESHPVANNQTADGRAK 313

Query: 331 NRRIDILV 338
           NRR+++ +
Sbjct: 314 NRRVEVSI 321


>gi|253990531|ref|YP_003041887.1| hypothetical protein PAU_03057 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638897|emb|CAR67512.1| similar to putative membrane protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781981|emb|CAQ85145.1| similar to putative membrane protein [Photorhabdus asymbiotica]
          Length = 583

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + L  ++ + ++  VA+   K  +       I ++     +  +FD   +     +  
Sbjct: 407 QGERLRPRLQAAIASDVAEPSEKKPVTTAVPQTISLN-----SLALFDVGQAKLKVGSTK 461

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           VL      +       I+I G+TD++     A  N  LSL RA +    L+++       
Sbjct: 462 VLVNALINIRAKPGWLIAITGYTDST---GDAAKNRALSLARAEAVRDWLLQTSDIPLAC 518

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILV 338
             + G    R    +      +ANRR++I +
Sbjct: 519 FAVQGEGATRPVATNSTAAGRAANRRVEIRL 549


>gi|110681204|ref|YP_684211.1| OmpA domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|109457320|gb|ABG33525.1| OmpA domain protein [Roseobacter denitrificans OCh 114]
          Length = 625

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+      +  + +I +VL    +  + ++GHTD+         N  LS  RA S 
Sbjct: 497 FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQ---GREEMNRSLSQARAQSV 553

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L    V         G+        +D       NRRI+  +   +
Sbjct: 554 LNELRARRVLTSNFIA-KGYGESNPIADNDTEEGREANRRIEFKLIRPE 601


>gi|296113590|ref|YP_003627528.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
 gi|295921284|gb|ADG61635.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
          Length = 171

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S    P+   +L +  + L  +    + + GHTD          N  L   
Sbjct: 66  PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +    L+  G+++  +  IS F   R      ++   S NRR ++
Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169


>gi|319778099|ref|YP_004134529.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171818|gb|ADV15355.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 440

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           D       +           + QR    I+ ++           +           + + 
Sbjct: 201 DADAEGAPLSPNWKGVIASDEPQRFIVPIWVMALGAAVAAMTIHVGLSMALSSQAVELSA 260

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           L +++       +   S +       K     L +  +   + L +           +  
Sbjct: 261 LVRALPPPARGDITRTSPKVDAPPPEKVDFALLPEFQAGAPADLRSALSG---TESVSLA 317

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPF-- 277
            + I      N  +F  S          ++  + +V+         I++ GHTD+ P   
Sbjct: 318 KLTIQ---ASNPELFQSSRPQLTEGFEPLIGSLAKVILANQELIGNITVVGHTDSVPLQK 374

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            N    N RLS  RA +   +L+++GV  DR+    G A              + NRR++
Sbjct: 375 TNPLSTNQRLSEARAQTIADMLVQNGVPRDRVHS-EGRAATDPVATDSTREGRALNRRVE 433

Query: 336 ILVEDR 341
           +LVE R
Sbjct: 434 VLVEKR 439


>gi|310816653|ref|YP_003964617.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
 gi|308755388|gb|ADO43317.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
          Length = 510

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 85/301 (28%), Gaps = 26/301 (8%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
               A+                 +   +         +     D       + L     +
Sbjct: 190 AELTAMTLSLESERARAEETLTLLAAARAAQAELEGARDTALTDAEAQAALLALAQQQLS 249

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           ++++            N+Q +                    +  +  I    +     L+
Sbjct: 250 EQQEMSSQAQLQVEALNAQAAALRNQLGDLQGLLDASAVADSVAQVQIESLGSQLNAALA 309

Query: 180 KEKILAM-----KRKKRLQDLAKKISSTLSGLVADNIV-------KGVLFETTRTGILIS 227
           +           +  +R++   +           +          + +L       I+  
Sbjct: 310 RVAAEERRARTLEEAERIRLEEEARRLAEEAESLEQYRSEFFGSLRALLDGQDGVQIVGD 369

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN 279
                +  +F+  S+         +  +  +L             VI + GHTD +P   
Sbjct: 370 RFVFSSEVLFEAGSATLSAAGDAEIANVAALLRRIASEIPSQIDWVIRVDGHTDNTPLSG 429

Query: 280 I--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
                +NW LS  RA S    ++++ G+  +R+   +GF  ++    ++     + NRRI
Sbjct: 430 TGEFANNWELSQARALSVVLYMIQNEGIPPNRL-AANGFGEYQPLNPANTPEARAQNRRI 488

Query: 335 D 335
           D
Sbjct: 489 D 489


>gi|311748785|ref|ZP_07722570.1| putative OmpA family protein [Algoriphagus sp. PR1]
 gi|311748788|ref|ZP_07722573.1| putative OmpA family protein [Algoriphagus sp. PR1]
 gi|126577322|gb|EAZ81570.1| putative OmpA family protein [Algoriphagus sp. PR1]
 gi|126577325|gb|EAZ81573.1| putative OmpA family protein [Algoriphagus sp. PR1]
          Length = 805

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+        L++   +L      ++ I GHTD          N  LS  RA + 
Sbjct: 684 FDFDKSMLRSVHKKELERTAIMLKRMPNLMLYIEGHTDQR---GDDAYNQSLSERRADAV 740

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDRQ 342
              L K G+  +R+ + + F   +          +  M+  NRR ++ V   Q
Sbjct: 741 KAYLTKRGIEGERMEE-TWFGETKPVNDCSELDCTSAMHQLNRRTELRVGKSQ 792



 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNW 285
            +    +   +D        +   VL K+GE++     +  + G HTD+         N 
Sbjct: 526 QLPVYVDIVYYDLDKYQIREDAKPVLDKLGELMNRYEFLDLLVGSHTDSR---ASDEYNI 582

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILV 338
            LS +RA +  + + +  +  +RI ++  F   +L           +  +  NRR ++++
Sbjct: 583 TLSNNRAEAVTEYMAQYNIPAERI-RLEWFGEQQLVNDCGDGVPCPETDHQLNRRSELVL 641

Query: 339 ED 340
           E 
Sbjct: 642 EA 643


>gi|226229138|ref|YP_002763244.1| hypothetical protein GAU_3732 [Gemmatimonas aurantiaca T-27]
 gi|226092329|dbj|BAH40774.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 457

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +  PE+   L++I  +L+   +  + I GHTD       A  N  LS  RA + 
Sbjct: 355 FDTGKDVIRPESTPTLKEIAAMLSEHADLQLIIEGHTDNV---GAAPANLALSQRRADAV 411

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              L+   G+   R++   G        A+        NRR++++
Sbjct: 412 RSALVSDYGIDGGRLTA-KGLGQTVPATANTTPEGRQQNRRVELV 455


>gi|302381967|ref|YP_003817790.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192595|gb|ADL00167.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 200

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +  +   R         ++  T    +       VL E      ++   D      F  
Sbjct: 43  DQVAVVDGRVDATDQRVAQVEGTAGQALERANAAQVLAEGKFMYEVVLSDDSVK---FPS 99

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                 PE    L ++ + L    + +   I+GHTDA         N  L   RA +  +
Sbjct: 100 DRDALSPEAEQRLAELAQRLKAENKNVYLEIQGHTDA---AGPESYNDALGEARAEAVRR 156

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            L + G++ +R++ IS +        +      + NRR+ I+V  
Sbjct: 157 SLSRQGIALNRMATIS-YGEEAPVADNATPEGRAQNRRVAIVVLS 200


>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
 gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
          Length = 339

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 8/125 (6%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
            +      ++ I  ++    F   SS+   E++  L  + E L    +  + + GHTDA 
Sbjct: 209 VKEKVQDKMMKIASEKVQVAFPFGSSVLSEESMQQLTPVIEHLKAYPDAKLFLVGHTDA- 267

Query: 276 PFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
                A  N   S+ RA +    L  +  + + R+  +SG         +D     + NR
Sbjct: 268 --SGPAEYNQTFSVKRADALATYLSEEFSIDKSRM-TVSGEGESMPIATNDTTEGRAMNR 324

Query: 333 RIDIL 337
           R+ + 
Sbjct: 325 RVSVF 329


>gi|37704634|gb|AAR01589.1| OprF [Pseudomonas sp. MFY79]
          Length = 296

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 214 FDFDKSVVKPNSYADVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAV 270

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322
            QVL+K G+   R+S + G+   R   
Sbjct: 271 KQVLVKDGIDAGRVSSV-GYGESRPVA 296


>gi|86608243|ref|YP_477005.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556785|gb|ABD01742.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 357

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S          L +I +++   T+  I + GHTDA+        N  LS  RA +
Sbjct: 249 LFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDAT---GSFDYNLGLSRRRAEA 305

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
               L++ G+ + R+  + G        ++      + NRR++++
Sbjct: 306 VVNRLVQLGIEQRRLYPV-GVGFSAPVASNTTEEGRAKNRRVELV 349


>gi|254467364|ref|ZP_05080775.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206688272|gb|EDZ48754.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 209

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+        VL +    +    E    + GHTDA         N  L L RA +A
Sbjct: 66  FDFDSAQLDQTARAVLDQQAHWIRQFPEVRFRVFGHTDAV---GSDAYNRALGLRRARAA 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  +      +  I +      NRR
Sbjct: 123 VNYLVSRGISRSRLEAVISHGETQPLIPTPERERRNRR 160


>gi|189179677|dbj|BAG39458.1| outer membrane protein [Gluconacetobacter intermedius]
          Length = 364

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   +     +  ++ +  +   H     I + G+TD +   P     + N  LS+ 
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 314

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV  + I  + G+      + +  D     NRR++I++
Sbjct: 315 RADSVKAELIRDGVPANAID-VHGYGEAHPLVPTGPDTREPQNRRVEIIL 363


>gi|170750721|ref|YP_001756981.1| peptidoglycan-associated lipoprotein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657243|gb|ACB26298.1| peptidoglycan-associated lipoprotein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 164

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+   P     L K    L         I GH D          N+ L   R
Sbjct: 54  DRVFFESDSTDLTPTATATLDKQAAWLQRYPRYTFIIEGHADER---GTREYNFSLGARR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343
           A +    L   G++  R+  +S +   R     +D    S NRR  I+++   G
Sbjct: 111 AQAVNDYLATRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRRAVIVLDRGAG 163


>gi|225012050|ref|ZP_03702487.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225003605|gb|EEG41578.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 299

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
            I       +F+    I   E ++ L+++  +L       I + GHTD +        N 
Sbjct: 187 QIPGLIQLILFETDQDILTEEALISLEEVYSILIQYPNLNIIVEGHTDDT---GGVNYNQ 243

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            LS     +  + L+  G+S  +I   + +   R    +        NRR+   + +
Sbjct: 244 ELSEKIVATVLRFLINRGISSSKIKSAA-YGETRPLRTNSTSEGRRYNRRVQFNINE 299


>gi|300902742|ref|ZP_07120699.1| OmpA family protein [Escherichia coli MS 84-1]
 gi|300405215|gb|EFJ88753.1| OmpA family protein [Escherichia coli MS 84-1]
          Length = 211

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 10/139 (7%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI +  G  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192

Query: 317 HHRLKIASDPMN--SANRR 333
                 ++      + NRR
Sbjct: 193 PANPIASNSTAEGKAQNRR 211


>gi|255038851|ref|YP_003089472.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254951607|gb|ACT96307.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 673

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 86/262 (32%), Gaps = 11/262 (4%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            +N     +    D  I+   T +            ++          +     +    N
Sbjct: 415 PENLGPAINSPLWDAFINIPATGDYAYFSASDKVLGQEDIFRIRMTPEIKPDPVAVVSGN 474

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS----S 201
               ++ K      + D + S N        P + E  L +  K+  +  A        S
Sbjct: 475 VFEAETTKPVKSEITADFKNSNNTFAKANFDPETGEYRLILPLKEVYRISASGEGYFPVS 534

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               L+ DN  + +        I      + +  MF +SS+   P ++V L +I E +  
Sbjct: 535 EDMDLLGDNAFRTIRKNIYLHPIKAGQQIRLSNTMFSQSSAEVTPASLVELDRIAETMQT 594

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              + I + GHTD        + N +LS DR     + L+  G+   RI     +   R 
Sbjct: 595 YPTMEILLEGHTDNQ---GEVQKNVKLSADRVEQVKKYLLSKGIDGRRIQT-KAWGPARP 650

Query: 321 KIASDPM--NSANRRIDILVED 340
             ++        NRR++  +  
Sbjct: 651 IASNLTEQTRQKNRRVEFTILK 672


>gi|149369527|ref|ZP_01889379.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
 gi|149356954|gb|EDM45509.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
          Length = 631

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 13/143 (9%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           V     + V        I   I + +   N   FD       P+    L K+  ++    
Sbjct: 492 VPAGHDENVRVTIALKPIEDIIKEDKIVLNPIYFDYDKHNIKPQAAFELDKVVTLMKKYP 551

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            ++     HTD+         N  LS  RA +  Q ++  GV E RIS + G        
Sbjct: 552 TMVVRAESHTDSR---ATEAYNLALSNRRAQATVQYIISKGVDEARISGV-GKGESTPIN 607

Query: 323 A-----SDPMNSANRRIDILVED 340
           +     +D  +S NRR +  + +
Sbjct: 608 SCGDKCTDEQHSKNRRSEFTIVE 630


>gi|328947766|ref|YP_004365103.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
 gi|328448090|gb|AEB13806.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
          Length = 490

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 14/170 (8%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L KE++       +           +     +  +  V      TGI I++ + R    F
Sbjct: 322 LDKEQLEHKVSVPKKDKNYYIAYHQIKKYFFERKIPDVDLNEVLTGIQITMQNLR----F 377

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              S   LP+    + +I E L  +       I I GHT      N       LS+ RA 
Sbjct: 378 IADSYELLPQEKPRIAQIAESLKKATSSGEYTILIEGHTADVNKPNGQ---MTLSIQRAQ 434

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              + L+ +G+ ++ +    GF   +    +      + NRR++I++  +
Sbjct: 435 EIIKELVSNGIDKN-LFTYRGFGGTKPVADNSTPQGRALNRRVEIIIMPK 483


>gi|257091971|ref|YP_003165612.1| hypothetical protein CAP2UW1_0326 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044495|gb|ACV33683.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 214

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 17/158 (10%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGI---LISIIDQR----NTPMFDKSSSIPLP 246
           +LA  + + +     +   +  L +     +    +++ + R     + +F  +S    P
Sbjct: 42  ELATHLEAEVQKRQMEEKRRMALEKALAIPLATGRVTLNNGRIGISGSVLFALNSDQLQP 101

Query: 247 ETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF---RNIARDNWRLSLDRAYSAYQVL 299
              ++L+ +   L            + G TD  P     +   DNW LS  RA +  + L
Sbjct: 102 AGRLLLKSLVAPLRVYLGERDELLMVSGFTDDVPIQHGNSRFVDNWELSAQRALTVTRAL 161

Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
           +  G+    I   + F   +   ++  D   S NRR++
Sbjct: 162 IDEGMPSSLIFAAA-FGTEQPVASNADDRGRSQNRRVE 198


>gi|153873003|ref|ZP_02001734.1| outer membrane protein ompA [Beggiatoa sp. PS]
 gi|152070531|gb|EDN68266.1| outer membrane protein ompA [Beggiatoa sp. PS]
          Length = 301

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD-----NWRLSLD 290
           F+ S++     +   LQKI  VL      ++ ++GH+DA P+R  ++      N +LS  
Sbjct: 192 FNTSTTTLKQASTRQLQKIASVLKMVDPTMVKVKGHSDAQPWRGRSQSESKRLNLKLSQQ 251

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPM-NSANRRIDILVE 339
           RA S   VL+  G     +++  G+  +   +  + P   + NRR++I V+
Sbjct: 252 RAESVKNVLVNEGF-PKNLTQAKGYGSNDPLVLGNSPAIWAKNRRVEIEVK 301


>gi|269103827|ref|ZP_06156524.1| putative OmpA family protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163725|gb|EEZ42221.1| putative OmpA family protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 229

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 10/143 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    +      +  L  +  
Sbjct: 89  YMDVQAAKLRKQLASSGITVTRNGNNIVLNM---PNEITFGVDQTTLNQRAMNALHNVAL 145

Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V        +++ G TD++     A  N RLS  RA      L++ GV+ +R+    G  
Sbjct: 146 VAKEYNKTQLNVYGFTDST---GAASYNQRLSQVRAAEVGNYLIRQGVAANRVVS-QGMG 201

Query: 317 HHRLKIASDPM--NSANRRIDIL 337
                  +      + NRR+ I+
Sbjct: 202 EASPIATNSTAAGRAENRRVQIV 224


>gi|312796631|ref|YP_004029553.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
 gi|312168406|emb|CBW75409.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
          Length = 216

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS +    +++++      K +   L+G +A            R  ++   I    + +
Sbjct: 43  QLSAKLENEVRQRQMETQRRKTLEQVLAGPLAAG----------RVTLVNGRIGISGSVL 92

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   +L+ + + L        E++ + G  D    R       DNW LS 
Sbjct: 93  FALNSDQLQPEGRELLKSLAKPLRSYLSARDEILMVSGFADDQQVRAGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            RA +  +  +  GV    +   + F   +   ++  D   + NRR++I
Sbjct: 153 QRALTVTRAFISEGVPASSVFAAA-FGSEQPVSSNADDAGRARNRRVEI 200


>gi|303245612|ref|ZP_07331895.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492875|gb|EFL52740.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 345

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 8/143 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             I      L  +   +  L       I   I+    +  FD       PE + VL++  
Sbjct: 203 NCIELGEELLRNEAARERFLECALYEWIEDEIV-VFRSIYFDFDKYNIKPEFVPVLEEGT 261

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            ++     +  I  G+TD+       + N +L   RA S     +K G+   RI  IS  
Sbjct: 262 AIIKSKPTMKVILEGNTDSI---GTPQYNMKLGQRRADSVKAFFVKKGIDASRIEAIS-L 317

Query: 316 AHHRLKIASDPM--NSANRRIDI 336
                   +      + NRR  I
Sbjct: 318 GLTDPVATNKTAQGRALNRRCVI 340


>gi|153806760|ref|ZP_01959428.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
 gi|149131437|gb|EDM22643.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
          Length = 238

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 74  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 193 KGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227


>gi|58040218|ref|YP_192182.1| Outer membrane protein [Gluconobacter oxydans 621H]
 gi|58002632|gb|AAW61526.1| Outer membrane protein [Gluconobacter oxydans 621H]
          Length = 379

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   S        ++ +  +   H     I + G+TD S   P     + N  LS  
Sbjct: 270 VFFDWDKSDLTGRAREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSNR 329

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           RA S    L++ GV    I  I G+   +  + +  +     NRR++I+++
Sbjct: 330 RASSVKAELIRDGVPAAAID-IHGYGESKPLVPTGPNTREPQNRRVEIILK 379


>gi|78063205|ref|YP_373113.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77971090|gb|ABB12469.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 226

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSL 289
               +F+   +  LP++  VL +I + L+   T  I + GHTD+ P  N     NW LS 
Sbjct: 115 DAKILFNVGDARLLPDSSPVLNQIAQALSDHATGDILVEGHTDSVPIANAKYESNWELSS 174

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            RA S  + L + GV+  R++ I G A  +  +
Sbjct: 175 ARAGSVVRYLTERGVAPHRLAAI-GRADTQPLV 206



 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
          +   +      G W I YAD +T LM  FL ++++ 
Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ 48


>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
 gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
          Length = 350

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
 gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
 gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
           str. E2348/69]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|161520471|ref|YP_001583898.1| DotU family type IV/VI secretion system protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353338|ref|YP_001948965.1| putative OmpA/MotB family outer membrane protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344521|gb|ABX17606.1| type IV / VI secretion system protein, DotU family [Burkholderia
           multivorans ATCC 17616]
 gi|189337360|dbj|BAG46429.1| putative OmpA/MotB family outer membrane protein [Burkholderia
           multivorans ATCC 17616]
          Length = 405

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 9/157 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  +RL        +    L  +     V         ++++   R   MF   +    P
Sbjct: 251 REAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTL---RFAGMFVPGAVTVAP 307

Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303
               V+   G  +A   E + +R  G+ D++P  +  +  N  LS  RA    ++L+ +G
Sbjct: 308 WGASVVASAGREIASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAG 367

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           V    + ++ G         +      + NRR++++V
Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403


>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
 gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
 gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
 gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
 gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
           H252]
 gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
           H263]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|218778894|ref|YP_002430212.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760278|gb|ACL02744.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 215

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S    P     L  +  VL  +    +SI GH  +    + A  N  LSL RA + 
Sbjct: 111 FDLNSMELNPAARSALDAVSSVLHVNKAVKLSIEGHACS--AGDNAAYNNYLSLQRAQAV 168

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L+  GV   R+  ++G+  ++    ++       NRR++I+
Sbjct: 169 KDYLISRGVDGARM-SVTGYGANQPVKDNNSRAHRIQNRRVEIV 211


>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
 gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
 gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
 gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
 gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|86747898|ref|YP_484394.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86570926|gb|ABD05483.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 464

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 79/276 (28%), Gaps = 9/276 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           +      +NL        ++   P    Q   D           V              R
Sbjct: 195 EAIGAALRNLPEGYAVAANDIKAPPYVFQANKDPVASTLTLTGYVPDNNVHAALAAAAGR 254

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
              +   +   + S                          +  +    L   +  +    
Sbjct: 255 KFFSEKVVDQLKASIGAPQGFAGAVAPALGALSRLSTGTLVVSDREVRLSGDALFEAAVS 314

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  L     +  +  + L        V     +      +   ++T  F+ +S+    
Sbjct: 315 QIRSELNKDMPQGWTVKAELSVKPAASPVDASVCQQLFDDLLG--KSTVRFESASATIDK 372

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           ++  +L ++ E         I + GHTD+         N  LS  RA +    ++++G++
Sbjct: 373 DSAGLLDRLIETAMRCPGASIEVAGHTDSDGEAG---FNQALSEKRARAVVDYMVRAGLT 429

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            +R     G+        +D     + NRRID ++ 
Sbjct: 430 PERFQAF-GYGSRIPLAGNDSDAGKAKNRRIDFVIR 464


>gi|189347858|ref|YP_001944387.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
 gi|189342005|gb|ACD91408.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
          Length = 416

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 88/308 (28%), Gaps = 31/308 (10%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           +MA F++  +        K+      +  G   +  S+    ++  P         LS+ 
Sbjct: 130 MMAPFVMAVL-------GKQVTSDNLDSEGLTSLLNSQKSAVQRAAPAGLPGVLGLLSLS 182

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ-------QSEHCKNSLTRDSEKGKD 156
           +              N     + L   +  ++          Q    +      +     
Sbjct: 183 QLGGAPPTVPIGIPGNIASFAKGLWPFLLGIAALAMLMKTCGQPPVKETPPPAAAVAPDT 242

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              ++D   +           L       +    +L      I   L   + D       
Sbjct: 243 TAAASDTSTAAPDSAAVAADSLGAFGEYELPNGVKLNIPEFGIERKLIAFIEDATKPADK 302

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275
                   L+          FD   +   PE+   +  I E+L   + V     G+TD  
Sbjct: 303 ETWFSFDRLV----------FDTGKATLKPESQEQIGNINEILKAFSAVSLKFGGYTDNV 352

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
                 + N RLS DRA +    ++K G+ + R+    G+        +        NRR
Sbjct: 353 ---GDPQANLRLSKDRAEAVMTEIVKLGIDKARLDA-EGYGAEHPVADNATEEGRQKNRR 408

Query: 334 IDILVEDR 341
           +D  V  +
Sbjct: 409 VDCRVTKK 416


>gi|302037886|ref|YP_003798208.1| putative OmpA/MotB family outer membrane protein [Candidatus
           Nitrospira defluvii]
 gi|300605950|emb|CBK42283.1| putative Outer membrane protein, ompA family [Candidatus Nitrospira
           defluvii]
          Length = 301

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F+ +S++   +   V+ K+   L  + E +I I GHTD+         N +LS  R
Sbjct: 194 EHIAFESNSAVLTSKGRAVVDKLVPALKRAPEAIIEIGGHTDSY---GDPEYNLQLSRTR 250

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
           A +  Q L++  V  +R++ + G+   R         +   NRRI+  V++ +
Sbjct: 251 AEAVRQYLVEHQV-PNRLTAV-GYGSTRPLSQDRTRAASKKNRRIEFRVKEER 301


>gi|254440394|ref|ZP_05053888.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198255840|gb|EDY80154.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 315

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 75/212 (35%), Gaps = 10/212 (4%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                   +   +  +             T + +   +E+      L +      +  ++
Sbjct: 108 AVEIAGLATGKAEQEVLFGGLDQTLNDLITMVSEIQRQEQESGGATLDEALNQMARAIEK 167

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
            ++  +++ + L   +   +   V  E     + +S+        F   S+    +  ++
Sbjct: 168 AREAEEQLRANLQSEIEQGL---VTVEQRDGIVFVSLG---AGGAFPSGSADLTQQASII 221

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           ++++G V +     + + GHTD  P     + RDNW L+  RA S  Q +  +   + R 
Sbjct: 222 IEELGAVTSDPASRVIVSGHTDNVPISFGALYRDNWDLAAARAASVVQAIEATNPVQGRT 281

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
                F   +    +        NRRI+I +E
Sbjct: 282 MSAVSFGQTQPIADNFTAEGREQNRRIEIEIE 313


>gi|330861523|emb|CBX71733.1| putative lipoprotein yfiB [Yersinia enterocolitica W22703]
          Length = 169

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD          +  +Q IG  L +     + + G+TDA         N +LS  R
Sbjct: 62  NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAI---GEDGYNQQLSFQR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+    I ++ G         +      + NRR+ I+V   
Sbjct: 119 ASAVADTLAAIGIPRANI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169


>gi|326559589|gb|EGE10003.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 7169]
 gi|326562671|gb|EGE12973.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
           103P14B1]
 gi|326564691|gb|EGE14909.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
           46P47B1]
 gi|326565509|gb|EGE15680.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
           12P80B1]
 gi|326567731|gb|EGE17837.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC1]
 gi|326568633|gb|EGE18704.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC7]
 gi|326574224|gb|EGE24172.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
           101P30B1]
 gi|326575009|gb|EGE24938.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis O35E]
          Length = 171

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S    P+   +L +  + L  +    + + GHTD          N  L   
Sbjct: 66  PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +    L+  G+++  +  IS F   R      ++   S NRR ++
Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169


>gi|255318428|ref|ZP_05359661.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
 gi|262378658|ref|ZP_06071815.1| outer membrane protein [Acinetobacter radioresistens SH164]
 gi|255304420|gb|EET83604.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
 gi|262299943|gb|EEY87855.1| outer membrane protein [Acinetobacter radioresistens SH164]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L+++   L         I GHTD+         N+ LS +RA + 
Sbjct: 152 FESGSAVLTAAGRQILEEMAVALHKVGGKKVKIIGHTDS---SGDGNKNFLLSQERAMAV 208

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  + +S   G    +    +        NRRI+  V 
Sbjct: 209 CNYLIAKNIKAENLST-EGMGSSKPVADNTTAEGRKKNRRIEFEVL 253


>gi|295690756|ref|YP_003594449.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295432659|gb|ADG11831.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 189

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLS 288
             ++  F  +++   PE    L +  E L    + +   I+GHTD          N  L 
Sbjct: 80  SDDSVKFPVNAATLSPEAEQRLSEFTEKLKADNKNVYLEIQGHTDN---SGSKEYNDELG 136

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             RA +  + L + GV+ +R++ IS +        ++     + NRR+ ++V  
Sbjct: 137 EKRAETVRKFLSQHGVALNRMATIS-YGQEAPVAPNETREGRAQNRRVVVMVLS 189


>gi|124008177|ref|ZP_01692874.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123986276|gb|EAY26098.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 515

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           ++T  F  ++      T  +L  I  +L    ++   + GHT           N  LS  
Sbjct: 402 KSTAYFYYTNDDINKATESLLNDIVVILKKHPDIYLELEGHTCN--IGETEDANQNLSER 459

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
           RA +  + L+  G+ E+R+  + G+   R   ++        NRR+   +   +
Sbjct: 460 RASAVKKYLVNKGIDENRLKTV-GYGSKRPVASNKTEFGKIRNRRVKFKLVKTE 512


>gi|88798977|ref|ZP_01114558.1| OmpA/MotB [Reinekea sp. MED297]
 gi|88778204|gb|EAR09398.1| OmpA/MotB [Reinekea sp. MED297]
          Length = 300

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 107/299 (35%), Gaps = 17/299 (5%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +++ I+         I  Y      +    ++     Q   E + Q      +       
Sbjct: 10  LIFSISTLIVSLLVNILLY----QSHNDKNAELAEQAQTITELNDQLTQQRQLKSTQFAR 65

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQ--SEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
             ++    T      Q+L+  +  LS  QQ  +E  + +  + +     +       K+ 
Sbjct: 66  LDEMTGQQTELASIIQQLQGELKTLSQQQQSSAETARQAQQQLATARSRIQTLDQELKTA 125

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            +        +  ++    +       ++ ++S+ L+  ++       +        LI+
Sbjct: 126 QQSLEQARVTIHNQQRALRQTSATQASVSTELSTELAAQLSSYDRDISITTAADGTTLIN 185

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----AR 282
           I     T +F  ++     +   VL  + EVL    +    + GH DA P  +       
Sbjct: 186 I---PLTLLFANTNLDLANDAETVLTSLSEVLKQHPDRRVQVIGHADARPIVSDLAQTYP 242

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339
            NW LS  RA      L+  GVS+ R+   SG A ++     A++   S NRRI++ ++
Sbjct: 243 TNWELSSARASRVVTFLIDQGVSDHRLLA-SGRAANQPVRDGANEEDWSVNRRIEVQIQ 300


>gi|329943863|ref|ZP_08292134.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328531569|gb|EGF58405.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 384

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 10/229 (4%)

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           +        +N    ++  +Q+    +    D++    +            E +      
Sbjct: 105 STTDGSGANDNGFLEVTPGEQTTSYLSFGKVDTDTVTVMVPMAGFTTVSVLEADAAKKAG 164

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                 + +  +      +  +          +       T    I +++        F 
Sbjct: 165 VDLNAASSELDQFPGAATELAAPVAIERYTRALDDSTSTHTGGQDITVTLASDVT---FA 221

Query: 239 KSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             S+   P     LQ + + L        +SI GHTD          N  LS  RA +  
Sbjct: 222 SDSADLTPAADTQLQTVADQLNQYPDGGTLSIVGHTDDIQ---DDAYNQPLSEKRANAVK 278

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
             L +    +      +G      ++   +D   +ANRR++I +    G
Sbjct: 279 DRLQQLTTLDKWSPTTTGKGESEPRVKETTDEARAANRRVEITLTPTGG 327


>gi|197336986|ref|YP_002157822.1| outer membrane protein [Vibrio fischeri MJ11]
 gi|197314238|gb|ACH63687.1| outer membrane protein [Vibrio fischeri MJ11]
          Length = 255

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F+   S     +  VL K+   +      + + GHTD+   +  +  N+ L L RA 
Sbjct: 152 RVYFNFDKSTLTKRSEYVLDKLYSKMGEKDIKLKVEGHTDS---KGSSTYNYDLGLKRAN 208

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             YQ L++ G   ++ S ++          +   N    NRR++I
Sbjct: 209 IVYQYLVQQGAEPNQFSVVT-KGEREPIKTNKTANGREKNRRVEI 252


>gi|59713413|ref|YP_206188.1| outer membrane protein [Vibrio fischeri ES114]
 gi|59481661|gb|AAW87300.1| outer membrane protein [Vibrio fischeri ES114]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F+   S     +  VL K+   +      + + GHTD+   +  +  N+ L L RA 
Sbjct: 150 RVYFNFDKSTLTKRSEYVLDKLYSKMGEKDIKLKVEGHTDS---KGSSTYNYDLGLKRAN 206

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             YQ L++ G   ++ S ++          +   N    NRR++I
Sbjct: 207 IVYQYLVQQGAEPNQFSVVT-KGEREPIKTNKTANGREKNRRVEI 250


>gi|159045641|ref|YP_001534435.1| OmpA domain-containing protein [Dinoroseobacter shibae DFL 12]
 gi|157913401|gb|ABV94834.1| OmpA domain protein [Dinoroseobacter shibae DFL 12]
          Length = 617

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 15/292 (5%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
           T+    + +   F      + + +  +   + P        +         +  V L+  
Sbjct: 311 TNAALFERVAAEFEADLPAVFSLTSTLPRPEAPRPGIFDPNLTRFTATLSPEGLVQLRGH 370

Query: 117 STNQ-KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            T+  +K+         + + +  S         +    + L     L    N       
Sbjct: 371 VTDTIRKEVTATMAKAMFGAPNVYSATTVAEDVPEGWSVRVLAGLEALGHLHNGSVTITP 430

Query: 176 PPLS-KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE------TTRTGILISI 228
             +    +  A      +  L  +     S L  D     +L               I  
Sbjct: 431 EFMRIGGRTGAEDGPAEIAGLLARRLPEESDLRLDVTYDPILDPATALPTPEECYARIDA 490

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
           I       F+  SS    E   ++ +I +VL   +     I GHTD          N  L
Sbjct: 491 IQAEGKITFEPGSSQIAAEAEAIMDRIAQVLVDCSHVEFEIAGHTDNQ---GREVMNLNL 547

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           S  RA +    L +  +    +    G+        +        NRRI   
Sbjct: 548 SQARADAVLAALSERRILTGNLVA-RGYGEAMPIADNSTAEGREANRRISFT 598


>gi|71064857|ref|YP_263584.1| OmpA family outer membrane protein [Psychrobacter arcticus 273-4]
 gi|71037842|gb|AAZ18150.1| possible outer membrane protein, OmpA family [Psychrobacter
           arcticus 273-4]
          Length = 533

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 7/175 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +N  +   L  L  +   A      + +      + ++  +  +               +
Sbjct: 312 VNAADTAALNKLVSDLQAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDV 371

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           +         F+   ++       +L +  +++     +   I GHTD +     A  N 
Sbjct: 372 ARALSLQVVNFEVDKALIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKT---ADAAYNL 428

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +LS +RA +    L+  G    ++    G         +        NRRI+ +V
Sbjct: 429 KLSEERAQAMKAYLVAQGADPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482


>gi|332292047|ref|YP_004430656.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170133|gb|AEE19388.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 650

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 226 ISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
           I+I D     +      FD       P+  + L+K+  V+      V+  R HTD+    
Sbjct: 524 INIGDDLAKVLELNPIYFDFDRFNIRPDAALELEKVIAVMREYPNLVLDARSHTDSR--- 580

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSAN 331
                N  LS  RA +    ++  G+S  RI    G+   +           S+  +  N
Sbjct: 581 GKDSYNLSLSDKRAKATVAYIINQGISSSRI-SGQGYGEKQPVNTCSNGVNCSEEEHQLN 639

Query: 332 RRIDILVEDRQ 342
           RR + +V    
Sbjct: 640 RRSEFIVISNN 650


>gi|296162992|ref|ZP_06845769.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295886786|gb|EFG66627.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 248

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +    F   S++  P     L     V        +++ G+TDA+        N  LS  
Sbjct: 140 QGNANFATDSAMLSPIAKKNLDHFMSVNQGINLHRLTVVGYTDAT---GSEAHNLNLSQA 196

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  Q L   G+  D+     G        ++        NRR+D+ V
Sbjct: 197 RAAAVVQYLRDGGLHVDQFVA-RGLGSADPVASNATAEGRMQNRRVDVRV 245


>gi|156977399|ref|YP_001448305.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
 gi|156528993|gb|ABU74078.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
          Length = 216

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 11/161 (6%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239
           A  R+  LQ   +  SS L   +A+    G+      T I      Q++  +     F  
Sbjct: 50  AQHRQGFLQIEQQSESSKLRQRLAEVSKLGLDKSGCMTWISNQNNHQQSDGLVARLHFGF 109

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             S   P     L ++   L+     I++ GHTD+   +     N  L L RA +  +VL
Sbjct: 110 DQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDS---KGSEGYNQELGLQRALTTSKVL 166

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              GV   RI  +      +   ++      + NRR ++ V
Sbjct: 167 STDGVERTRIV-VRSLGETQPIASNSTVEGRAQNRRSEVWV 206


>gi|146283137|ref|YP_001173290.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
           A1501]
 gi|145571342|gb|ABP80448.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
           A1501]
 gi|327481490|gb|AEA84800.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri DSM
           4166]
          Length = 167

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + GHTD          N  L   R+ +  
Sbjct: 68  FEYDSSDLKPEAMRALDVHAKDLKGNGARVVLEGHTDER---GTREYNMALGERRSKAVQ 124

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           + L+  GVS  ++  +S +   R       +   + NRR+++
Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVAMGNDEQSWAQNRRVEL 165


>gi|90417117|ref|ZP_01225045.1| outer membrane protein OprL precursor [marine gamma proteobacterium
           HTCC2207]
 gi|90331133|gb|EAS46389.1| outer membrane protein OprL precursor [marine gamma proteobacterium
           HTCC2207]
          Length = 177

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + ++       FD   ++  PE+   L +    L +S   + + GH D          N 
Sbjct: 68  VEVMTADTVFYFDFDKALLKPESRAALLEHSASLQNSPRNVRLEGHADER---GTREYNM 124

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            L   RA +  + L+  GVS   + ++  +   R     ++D     NRR+++
Sbjct: 125 ALGERRANAVKEFLVLQGVSPG-LIEVISYGEERAAAYGSNDDAWGLNRRVEL 176


>gi|59713370|ref|YP_206145.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
 gi|59481618|gb|AAW87257.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
          Length = 213

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +++++ +  +V    +  V+      GI I   D  +  ++D  S+   PE   ++ + 
Sbjct: 64  MQELTADIQEIVEQKNLDSVVVTAVTDGIRI---DLNSENLYDSGSASLKPEGKALISEF 120

Query: 256 GEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            E +         I + GH+D  P        NW LS  RA    + L+K  V + ++  
Sbjct: 121 AEAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRA 180

Query: 312 ISGFAHHRLKI----ASDPMNSANRRIDILVED 340
           ++ +A  + +       +     NRR+ I ++ 
Sbjct: 181 VA-YADAQPRADKALPIEQQRQLNRRVVIYIKR 212



 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 60/212 (28%), Gaps = 1/212 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +        +   W + Y+D +T+L+AFF+++  ++  ++   + ++  +     +    
Sbjct: 3   RTRPKVELKDDNDWMMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKV-VDTAAH 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                   +  E   Q  +D  +   +T                   L+     L +   
Sbjct: 62  LPMQELTADIQEIVEQKNLDSVVVTAVTDGIRIDLNSENLYDSGSASLKPEGKALISEFA 121

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               +  L   S   +       +               + E    + +    +   + +
Sbjct: 122 EAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAV 181

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +   +   AD  +           ++I I   
Sbjct: 182 AYADAQPRADKALPIEQQRQLNRRVVIYIKRN 213


>gi|78484555|ref|YP_390480.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78362841|gb|ABB40806.1| OmpA family protein [Thiomicrospira crunogena XCL-2]
          Length = 314

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 72/273 (26%), Gaps = 20/273 (7%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ-----S 140
            Q P   SS       +++  T   +       +Q     + ++ +  L N         
Sbjct: 24  AQPPTPPSSFTAEKTLLEKAPTPEKLSSLYRDLDQDGVVDKQDHCLNSLPNQPVNAFGCE 83

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +    D                +  E +  L  +             +        
Sbjct: 84  ADEDHDGVVDRLDQCHKTPIGISVNEVGCEGDADLDGIIDSLDQCPGTLPGVVVNKAGCR 143

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQK 254
                     +        T  G+ ++        +      FD  S    P+   +L K
Sbjct: 144 LDTDLDRDGVLNNKDQCPNTPIGVTVNQYGCEPKSLVVTNIVFDLGSYKIRPDQKPILDK 203

Query: 255 IGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
               L    +   I I G TD+         N +LS +RA +    L++        I  
Sbjct: 204 DISQLRSLKDHERIVITGFTDSL---GSESSNLKLSWNRAQATKDYLVRKFKYDPASIL- 259

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           + G         +        NRRI  ++ D+Q
Sbjct: 260 VLGKGEANPVATNKTKEGRKQNRRISFMIMDQQ 292


>gi|300697371|ref|YP_003748032.1| outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum
           CFBP2957]
 gi|299074095|emb|CBJ53637.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
           solanacearum CFBP2957]
          Length = 279

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 86/278 (30%), Gaps = 10/278 (3%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
             AI+  F P    L   +  +                 + +    +      +     K
Sbjct: 5   LDAIKHGFRPAILALAATAACLGAALPAYGAPGDPAPATAANSVPGQVVAGGMVPDEATK 64

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                    ++  +N        N ++  +  G    K    +          +      
Sbjct: 65  ASVLARLRELYGSANVVDQIEVGNVVSPPNWTGNVQ-KILSPQIKQVNRGQLNIDGTQVA 123

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
               ++ + + Q LA  +++TL           V   + ++ +  ++ ++     F+  S
Sbjct: 124 VHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIE--FETGS 181

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P+   +L ++  VL         I GHTD          N  LS  RA +    L+
Sbjct: 182 ATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN---SGSRAMNLNLSQARAETVKSYLI 238

Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
             G     ++ I G    +   A+  D   S NRRI+ 
Sbjct: 239 NKGAEPGTLTAI-GVGPDQPVAANTTDEGRSRNRRIEF 275


>gi|197336843|ref|YP_002157778.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
 gi|197314095|gb|ACH63544.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
          Length = 213

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +++++ +  +V    +  V+      GI I   D  +  ++D  S+   PE   ++ + 
Sbjct: 64  MQELTADIQEIVEQKNLDSVVVTAVTDGIRI---DLDSENLYDSGSASLKPEGKALISEF 120

Query: 256 GEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            E +         I + GH+D  P        NW LS  RA    + L+K  V + ++  
Sbjct: 121 AEAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRA 180

Query: 312 ISGFAHHRLKI----ASDPMNSANRRIDILVED 340
           ++ +A  + +       +     NRR+ I ++ 
Sbjct: 181 VA-YADAQPRADKALPIEQQRQLNRRVVIYIKR 212



 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 60/212 (28%), Gaps = 1/212 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +        +   W + Y+D +T+L+AFF+++  ++  ++   + ++  +     +    
Sbjct: 3   RTRPKVELKDDNDWMMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKI-VDTAAH 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                   +  E   Q  +D  +   +T                   L+     L +   
Sbjct: 62  LPMQELTADIQEIVEQKNLDSVVVTAVTDGIRIDLDSENLYDSGSASLKPEGKALISEFA 121

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               +  L   S   +       +               + E    + +    +   + +
Sbjct: 122 EAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAV 181

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +   +   AD  +           ++I I   
Sbjct: 182 AYADAQPRADKALPIEQQRQLNRRVVIYIKRN 213


>gi|319409315|emb|CBI82959.1| Outer membrane lipoprotein omp16 homolog [Bartonella
           schoenbuchensis R1]
          Length = 173

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F  +SS    +   VL++  E L        ++ GH D          N  L   R
Sbjct: 62  DRVFFSLNSSSIELDAEYVLKRQAEWLLRYPHYFVTVEGHADDR---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +    L+  GVS  R+  IS +   R           + NRR+ + +    G
Sbjct: 119 SIAVRDYLVSLGVSSQRMKTIS-YGKERPVAVCDDISCWNQNRRVVLTINSGNG 171


>gi|308049357|ref|YP_003912923.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307631547|gb|ADN75849.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 354

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   SS     + +    I  +L +    + I+G  D++     ++ N  LS  RA +  
Sbjct: 249 FGFDSSELTDLSPLS-DIIERLLRYPDAQVFIQGFADST---GRSQYNLSLSHRRAQAVA 304

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             L   GV  DRI +I  F      I +      + NRR+ + +
Sbjct: 305 DYLQSQGVEPDRI-RIEDFGERLPVIDNATAEHRAQNRRVHLYI 347


>gi|189179676|dbj|BAG39457.1| outer membrane protein [Gluconacetobacter intermedius]
          Length = 373

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   +     +  ++ +  +   H     I + G+TD +   P     + N  LS+ 
Sbjct: 264 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 323

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV  + I  + G+      + +  D     NRR++I++
Sbjct: 324 RADSVKAELIRDGVPANAID-VHGYGEAHPLVPTGPDTREPQNRRVEIIL 372


>gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II
 gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii]
 gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii]
          Length = 243

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 124 KSDVLFNFNKATLKPEGQQALDQMYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 180

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 181 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 239

Query: 338 VED 340
           V+ 
Sbjct: 240 VKG 242


>gi|325855004|ref|ZP_08171720.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|327313291|ref|YP_004328728.1| OmpA family protein [Prevotella denticola F0289]
 gi|325483982|gb|EGC86922.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|326945391|gb|AEA21276.1| OmpA family protein [Prevotella denticola F0289]
          Length = 225

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  + +  V  V        + ++     +  +F  + S         L K 
Sbjct: 74  MDKVARETAQTLPNARVDKVTDANGLECVKVTF---DSGILFPLNGSKLSASAKNDLTKF 130

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             ++  ++     I+G+TDA         N  LS  RA +    L   GV+  +I  + G
Sbjct: 131 AALMKRNSNCDVAIQGYTDA---SGNDNINLPLSQRRAEAVSSYLKGRGVTGRQIRSVQG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILV 338
           F        +  ++ ANRR+++ +
Sbjct: 188 FGSSNPI-ENKTISQANRRVEVYL 210


>gi|255264472|ref|ZP_05343814.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
 gi|255106807|gb|EET49481.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
          Length = 227

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+        VL++  + +    E    + GHTD          N +L L RA + 
Sbjct: 82  FPFNSNALDENARAVLRQQADWIRQFPEVRFKVYGHTD---LVGGTAYNRQLGLRRAQAV 138

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  ++ F   R  I ++     NRR
Sbjct: 139 VIYLTSQGISRSRLEAVASFGETRPVIQTNGQERRNRR 176


>gi|326568759|gb|EGE18829.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC8]
          Length = 171

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD  S    P+   +L +  + L  +    + + GHTD          N  L   
Sbjct: 66  PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +    L+  G+++  +  IS F   R      ++   S NRR ++
Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169


>gi|194337185|ref|YP_002018979.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309662|gb|ACF44362.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 173

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               FD  S+    E    L + G  +  +    + I GH D       +  N  L   R
Sbjct: 68  GDVFFDYDSATLSAEAQEQLHQNGVWMGSNARKGALIEGHCDER---GTSEYNLALGDRR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
           A SA + L++ GV+  R+  +S +   R     +++   + NRR   +V+
Sbjct: 125 AISAKEYLVRFGVAPSRLETVS-YGEERPFAAGSNEESWAKNRRAHFVVK 173


>gi|170728573|ref|YP_001762599.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169813920|gb|ACA88504.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 224

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            + +  + L       GV    +   I++++    N   F    +        VL  +  
Sbjct: 84  YMDTQEAELRKQLQSTGVSVTRSGDNIILNM---PNEVTFGVDETHLSAGAKRVLNSVAL 140

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +   ++ G TD+         N RLS  RA      L+   V   R+    G  
Sbjct: 141 VAKEYDKTRLNVLGFTDS---SGSESYNLRLSKVRAVEVADYLVSQKVEYVRVKS-DGMG 196

Query: 317 HHRLKIASDP--MNSANRRIDILV 338
             R   ++      + NRR++I++
Sbjct: 197 EERPIASNATKEGRAENRRVEIIL 220


>gi|160885976|ref|ZP_02066979.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
 gi|260170568|ref|ZP_05756980.1| OmpA family outer membrane protein [Bacteroides sp. D2]
 gi|315918915|ref|ZP_07915155.1| outer membrane protein [Bacteroides sp. D2]
 gi|156108789|gb|EDO10534.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
 gi|313692790|gb|EFS29625.1| outer membrane protein [Bacteroides sp. D2]
          Length = 238

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +       +F   ++         L K  
Sbjct: 74  KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   ++N         N  LS +RA S    L+  GVS ++I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G        ++D       NRR+++ +   +
Sbjct: 193 KGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227


>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
 gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
          Length = 350

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|239818112|ref|YP_002947022.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239804689|gb|ACS21756.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 219

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   FD   S        VL +    L ++    + I GHTD +        N  LS+D
Sbjct: 107 PSDVSFDVGRSNIKSNFAPVLDQFASGLRNNPNAEVRIIGHTDNT---GSDAINNPLSVD 163

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA S    L+  GVS     +I G   H     ++     + NRR++I V +R
Sbjct: 164 RAASTRDYLVARGVSAAAF-RIEGRGSHEPIANNNSDAGRAQNRRVEIYVGER 215


>gi|192290369|ref|YP_001990974.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192284118|gb|ACF00499.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 441

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +S +       F++ S++    +  +L K+   +       I + G+TD          
Sbjct: 328 RVSALASAEKINFERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTD---GAGKKSA 384

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           N  LS  RA +    L K G+   ++    G+   +   A+D     + NRRI+ +V+
Sbjct: 385 NVALSKRRAEAVVASLTKVGIGSVKLVA-EGYGSAKPIAANDTAEGRAQNRRIEFVVK 441


>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
 gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
          Length = 370

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 242 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 298

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357

Query: 338 VED 340
           V+ 
Sbjct: 358 VKG 360


>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II; Flags: Precursor
 gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
          Length = 344

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G+TD          N +LS
Sbjct: 216 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 272

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 273 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 331

Query: 338 VED 340
           V+ 
Sbjct: 332 VKG 334


>gi|70732082|ref|YP_261838.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
 gi|68346381|gb|AAY93987.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
          Length = 165

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GVS  ++  +S +   R           + NRR+++
Sbjct: 123 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 163


>gi|330824057|ref|YP_004387360.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329309429|gb|AEB83844.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 912

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
              +          R    ++  +              G   ++   +           +
Sbjct: 629 RPGQRADARAAAAHRGRHGQVARAQRRAARLLRGPGARGDRAERGCAKADHRRPAAGGRA 688

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                   ++    E    L  +  +           L   +   + A+  +  L +  K
Sbjct: 689 ACRGERGMTVHAGGELDDGLEPAAPVWAVFGDLMGGALGAFALILVCALGMQMELAERLK 748

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETIVVLQ 253
                 +                     +++ D R     + +F  +S    PE   +L+
Sbjct: 749 TEQRQRAEQARRLTTLEQALAGPLAAGRVTLQDGRIGISGSVLFAFNSDELQPEGRQLLR 808

Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVLMKSGV 304
                +   L    E++ + G TD  P R         DNW LS  RA +  + L+  G+
Sbjct: 809 SLSAPLAAYLRERGEILMVSGFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGI 868

Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
              ++   + F   +   ++      + NRR++
Sbjct: 869 PSAQVFAAA-FGAEQAVASNADAEGRARNRRVE 900


>gi|260773001|ref|ZP_05881917.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
 gi|260612140|gb|EEX37343.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
          Length = 222

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 9/208 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + +Q+          ++     L  +     +     +       +  I A         
Sbjct: 18  AATQRQNATTGESETNAATRGALIGAVAGAAAGLATGDNAKQRRQRALIGATGGAAVGGG 77

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +        + L  + +  GV  +      L  ++   N   F  +S          L+ 
Sbjct: 78  VGYYFDQQEAALREELLHSGVQVQRVGDNQL--LLRMENGIGFQTNSYQLDSSIHRTLRG 135

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + ++L    +   +  GHTD++        N  LS  RA S    L+  GV+  R     
Sbjct: 136 VAKILVQYPDTSLVIDGHTDST---GGDTTNQVLSERRAESVRSFLLSQGVAPGRAIA-R 191

Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339
           G         +      + NRR+DI + 
Sbjct: 192 GNGSRFPICTNSTVEGRACNRRVDIQIL 219


>gi|89094432|ref|ZP_01167372.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
 gi|89081324|gb|EAR60556.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
          Length = 311

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 84/231 (36%), Gaps = 17/231 (7%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S+  +++Y+ L + +  +          N      +           +  I+  E   
Sbjct: 36  AISSVNEEKYKNLTDALAGVFVGLDQAIEVNPAPGQGKSESGFGIFIGGKHDIDVPEVTI 95

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            PP         +    L+ L +++    S  + +     +        + I +      
Sbjct: 96  SPPD-------QEETDILKALQRELEVAFSQHIREG---QLRVVGNDLWLSIELRSNY-- 143

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293
            +F+   ++P      +L++I  +L   +  I + G TD           NW LS  RA 
Sbjct: 144 -LFESGGALPNILADQLLEQIAGMLKDKSNPIHVEGFTDNQQISTDEFPSNWELSAARAA 202

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +  ++L + GV+ ++++ + G+   +   ++        NRR+ I+V   +
Sbjct: 203 AVVRLLSQFGVNPEQMAAV-GYGEFQPAYSNRTAEGQRLNRRVLIVVSRDE 252



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
             W I YADF+T+L AFF+VM+ I++ +++  K +          L  A   I     P 
Sbjct: 14  DRWVISYADFITLLFAFFVVMYAISSVNEEKYKNLTDALAGVFVGLDQA---IEVNPAPG 70

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  S++   + I      +  ++ I   +Q++  
Sbjct: 71  QGKSESGFGIFIGGKHDIDVPEVTISPPDQEETD 104


>gi|316936265|ref|YP_004111247.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603979|gb|ADU46514.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 464

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S+    ++  +L ++ E         I I GHTD+         N  LS  RA + 
Sbjct: 363 FDSASAGISKDSAGLLDRLIETAMRCPNARIEIAGHTDSD---GDDAFNQSLSEKRARAV 419

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
              ++++GV+ +R+    G+        +D     + NRRID +V 
Sbjct: 420 VDYMVRAGVTPERLQAF-GYGSKIPLSGNDSDAGKAKNRRIDFVVR 464


>gi|149913687|ref|ZP_01902220.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
 gi|149812807|gb|EDM72636.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
          Length = 599

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 16/220 (7%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +   +          +            +S+  E N  L  ++ E+    + ++    L 
Sbjct: 381 AALRDQLGQLQALLDDAKTREAAQDVQLQSLGNELNTALARVAAEERRRREAEEARARLL 440

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254
           ++ ++ L    ++   +       + GI I        +  +F    +         + K
Sbjct: 441 EEQNADLERYRSEFFGRLRDVLGAQEGIRIEGDRFVFSSEVLFAPGEAELSGAGQREVAK 500

Query: 255 IGEVLAHS--------TEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SG 303
           + E+              V+ + GHTD  P R      DNW LS+ RA S  + ++   G
Sbjct: 501 VAEIFRSVTDEIPEGIDWVLQVDGHTDDVPVRPGAAFEDNWELSMARALSVVRYMIDTLG 560

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +  +R+S  +GF  ++     D     + NRRI++    +
Sbjct: 561 LPPERLSA-NGFGQYQPVNPDDTPEARAQNRRIELKFTGK 599


>gi|320095395|ref|ZP_08027074.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977666|gb|EFW09330.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 402

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
           ++  +FD   S    +    L K+  VLA        + GHTD+    +    N  LS  
Sbjct: 289 QDGVLFDFGESAVRADAADTLAKLASVLADAKVPAAHVYGHTDSI---SDEAFNQTLSEQ 345

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338
           RA +    L K+G +        GF   +    +             ANRR++I +
Sbjct: 346 RAKAVVDELKKNGATAS--LDWQGFGETKPVAPNTNDDGTDNPAGRQANRRVEIFI 399


>gi|51598540|ref|YP_072728.1| flagellar motor protein MotB [Borrelia garinii PBi]
 gi|51573111|gb|AAU07136.1| flagellar motor rotation protein B [Borrelia garinii PBi]
          Length = 260

 Score = 87.7 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      + NW LS  R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V+  +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 NVNSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RVKKPSKCDEGTPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|212712403|ref|ZP_03320531.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
           30120]
 gi|212685149|gb|EEB44677.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
           30120]
          Length = 582

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
            ++   +  +FD            VL      +       I + G+TD +        N 
Sbjct: 442 QMVTLDSLSLFDVGQYTLKTGATKVLVDALLNIKAKPGWLIMVSGYTDNT---GNPELNQ 498

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
            LSL RA S    ++++         + G+  +     +   +    NRR++I +
Sbjct: 499 TLSLKRAESVRDWMIQTSDISPICFAVQGYGQNNPVADNRTADGRTRNRRVEIRL 553


>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
          Length = 365

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352

Query: 338 VED 340
           V+ 
Sbjct: 353 VKG 355


>gi|298524392|ref|ZP_07011801.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298494186|gb|EFI29480.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
          Length = 181

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 76  GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 133 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 180


>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
 gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
 gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
 gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
          Length = 375

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 247 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 303

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362

Query: 338 VED 340
           V+ 
Sbjct: 363 VKG 365


>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II
 gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
          Length = 238

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 119 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 175

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  D+IS   G             +    +A       +RR++I 
Sbjct: 176 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 234

Query: 338 VED 340
           V+ 
Sbjct: 235 VKG 237


>gi|163787730|ref|ZP_02182177.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
           ALC-1]
 gi|159877618|gb|EDP71675.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
           ALC-1]
          Length = 366

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           +        ++  S+   P +  V+ +    +L      I I  HTD+         N  
Sbjct: 249 LNATPIPIYYELGSARLTPASKKVIDERLLTILNDKPVNIEIMSHTDSR---GNDDFNQS 305

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVE 339
           LS  RA S    L+  G+S  R+S   G+   RL     +     +  +  NRR +  V 
Sbjct: 306 LSQQRANSVVNYLVSKGISRSRLSA-KGYGETRLTNRCTNGADCSETQHQRNRRTEFRVL 364

Query: 340 D 340
            
Sbjct: 365 S 365


>gi|85705227|ref|ZP_01036326.1| OmpA family protein [Roseovarius sp. 217]
 gi|85670100|gb|EAQ24962.1| OmpA family protein [Roseovarius sp. 217]
          Length = 191

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   SS         L++  +     +   +I GHTD+         N  LSL RA S 
Sbjct: 93  LFATDSSRIGASGQQRLREFFQQANAVS--YTIVGHTDSR---ASDEYNMGLSLRRANSV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
               +  G+    I+ + G+     K +++     + NRR++IL
Sbjct: 148 AA--VARGIGAS-IADVRGYGERMPKASNNTAEGMAQNRRVEIL 188


>gi|332559482|ref|ZP_08413804.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
 gi|332277194|gb|EGJ22509.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
          Length = 652

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278
                 I  +       F+  S+         L  + EV        + I GHTD+    
Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L    V   R+  + G+   R    +        NRRI+ 
Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597

Query: 337 LVEDRQG 343
            +    G
Sbjct: 598 TLLGEDG 604


>gi|77464589|ref|YP_354093.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389007|gb|ABA80192.1| possible outer membrane protein, OmpA family [Rhodobacter
           sphaeroides 2.4.1]
          Length = 652

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278
                 I  +       F+  S+         L  + EV        + I GHTD+    
Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L    V   R+  + G+   R    +        NRRI+ 
Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597

Query: 337 LVEDRQG 343
            +    G
Sbjct: 598 TLLGEDG 604


>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
          Length = 354

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|37704624|gb|AAR01584.1| OprF [Pseudomonas sp. MFY70]
 gi|37704664|gb|AAR01604.1| OprF [Pseudomonas sp. MFY162]
          Length = 298

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++  P +   ++ + + +A      + + GHTD+         N +LS  RA + 
Sbjct: 216 FDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 272

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322
            QVL+K GV+  R++ + G+   R   
Sbjct: 273 KQVLVKDGVAPSRVTAV-GYGESRPVA 298


>gi|238797533|ref|ZP_04641031.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
 gi|238718674|gb|EEQ10492.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
          Length = 168

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD       P+ +  +Q IG+ L       + + GHTD++        N +LS  R
Sbjct: 61  NKVLFDSDVKKLNPDGVRTVQNIGKALTAVGITHLRVDGHTDST---GEDSYNQQLSYQR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+    I  + G         +      + NRR+ ++V   
Sbjct: 118 AAAVADTLALIGIPRANID-VRGRGKLDPVADNRTAKGRAENRRVSMIVTAP 168


>gi|254227964|ref|ZP_04921394.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262396053|ref|YP_003287906.1| outer membrane protein A precursor [Vibrio sp. Ex25]
 gi|151939460|gb|EDN58288.1| outer membrane protein OmpA [Vibrio sp. Ex25]
 gi|262339647|gb|ACY53441.1| outer membrane protein A precursor [Vibrio sp. Ex25]
          Length = 326

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+     +   L    +++    +  + I G++D +     A  N +L+  RA + 
Sbjct: 216 FDLESAEVKDAST--LSGTVDLMNTYPQAQVEITGYSDTT---GSAAYNQQLTEKRAKAV 270

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                  G++ +R+  + G        +++       NRR++++V
Sbjct: 271 ADEFQAKGIAAERM-TVKGMGEANPVASNETRQGRQMNRRVEVVV 314


>gi|329890560|ref|ZP_08268903.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
 gi|328845861|gb|EGF95425.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
          Length = 191

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLS 288
             ++  F  + +   PE    L ++ + L      +   I+GHTD++      + N RL 
Sbjct: 82  SDDSVKFPVNHTELSPEAEQRLAELVQRLRAENANVYLEIQGHTDST---GNDQINERLG 138

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            +RA +  + L   G++ +R++ IS +   +    ++     + NRR+ I+V  
Sbjct: 139 QERAEAVRRFLSDQGIALNRMATIS-YGASKPVAPNNTREGRAQNRRVAIMVLA 191


>gi|197335718|ref|YP_002155279.1| outer membrane protein [Vibrio fischeri MJ11]
 gi|197317208|gb|ACH66655.1| outer membrane protein [Vibrio fischeri MJ11]
          Length = 219

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             +F+         +  +LQ + E L    + + + GHTD    +     N  L L R+ 
Sbjct: 111 RVLFNFDQYSLTERSKYILQNVTEKLETQKDTVLLNGHTDN---KGRDNYNINLGLARSN 167

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S    L+  G S++++   S F   +    +  +     NRR+DI
Sbjct: 168 SVKAFLLDQGASKEQLESYS-FGEQQPIDDNTTLEGQHHNRRVDI 211


>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
 gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
          Length = 358

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|83592431|ref|YP_426183.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83575345|gb|ABC21896.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 161

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 9/105 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F        P+    LQ+  + L        ++ GH D          N  L   R
Sbjct: 56  DRVFFGYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADER---GTREYNLALGERR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRR 333
           A S  + L+  GVS +R+ ++  +   R     +      + NRR
Sbjct: 113 ANSVREFLISQGVSANRL-RVVSYGKERPVCT-ETAESCYARNRR 155


>gi|332160220|ref|YP_004296797.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318607214|emb|CBY28712.1| integral membrane protein YfiB [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664450|gb|ADZ41094.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 169

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD          +  +Q IG  L +     + + G+TDA         N +LS  R
Sbjct: 62  NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAI---GEDGYNQQLSFQR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+    I ++ G         +      + NRR+ I+V   
Sbjct: 119 ASAVADTLAAIGIPRANI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169


>gi|226952046|ref|ZP_03822510.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
 gi|226837203|gb|EEH69586.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
          Length = 255

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+I       +L ++   L       + I GHTD+      A  N  LS +RA + 
Sbjct: 154 FESGSAILTEAGKRILDEMAVALNKVGGKQVKIIGHTDS---SGDASRNVILSKERAVAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   ++ DR+S   G         +   +    NRRI+  V 
Sbjct: 211 QDYLVSKNIATDRLST-EGKGSSEPIADNATADGRRKNRRIEFEVL 255


>gi|126463429|ref|YP_001044543.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105093|gb|ABN77771.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 652

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278
                 I  +       F+  S+         L  + EV        + I GHTD+    
Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L    V   R+  + G+   R    +        NRRI+ 
Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597

Query: 337 LVEDRQG 343
            +    G
Sbjct: 598 TLLGEDG 604


>gi|326563201|gb|EGE13469.1| OmpA family protein [Moraxella catarrhalis 12P80B1]
          Length = 551

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             +   D+   ++ ++       +  G   E     ILI+ +       F   S+    E
Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              +L    E L    E    I GHTD          N  LS  RA +  + L+  GV+ 
Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLLSKGVAA 495

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +R++   G +      ++        NRRI+ ++
Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528


>gi|313674495|ref|YP_004052491.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941193|gb|ADR20383.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 672

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   F + S   L  +   L ++  +L  S  +   I GHT+        R N  LS DR
Sbjct: 565 NNVYFAQGSYEILEASHPELDRLIRLLRSSETMQIEIGGHTERR---GSPRLNRILSQDR 621

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           A +    ++++G+ + RI    G+   +             NRR++  +  
Sbjct: 622 ADAVKAYIVQAGIDQKRIKT-KGYGSSKPVTDGRTEIERRQNRRVEYTILS 671


>gi|259419273|ref|ZP_05743190.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259345495|gb|EEW57349.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 1617

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F    +      + VL++  + L        V  I GHTD        + N  LS  RA 
Sbjct: 465 FATGKADIREAGLGVLKQAADALKALGAENYVFLIEGHTD---ITGSDKVNLPLSDARAK 521

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  Q  ++ +G++ +R+  + G+        +        NRR++I
Sbjct: 522 SVEQYFVESAGIAPERLQTV-GYGSRIPLATNATDRGKQTNRRVEI 566


>gi|59713685|ref|YP_206460.1| outer membrane protein [Vibrio fischeri ES114]
 gi|59481933|gb|AAW87572.1| outer membrane protein [Vibrio fischeri ES114]
          Length = 208

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 13/186 (6%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K           E   +  +   ++         +     +      L    I      
Sbjct: 30  TKEDAPFPDFENPETAPVEEMETSEMTRALTGPNGELKDDDMRQVAQQLTNMGIQYH--- 86

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276
           +     ++ISI ++ +   F  + +   P    +L K+  V+A   E+  +  GHTD   
Sbjct: 87  KVGNDQLVISIQEKVH---FSSAKAELTPLARSLLNKLIVVMASKPELALVLDGHTD--- 140

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N  LS  R+    + L+ + ++  ++    GF  +     +D +     NRR+
Sbjct: 141 VTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RGFGEYLPLCDNDTILGRKCNRRV 199

Query: 335 DILVED 340
           +I +  
Sbjct: 200 EITILK 205


>gi|298206796|ref|YP_003714975.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
 gi|83849428|gb|EAP87296.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
          Length = 630

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 15/150 (10%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +       +     ++ + T     I +     T  FD   +   P+   VL K  +++
Sbjct: 488 ENESIDFELERAKDMIVVDETTKQEKIDL----ETIYFDFDKADITPKAAAVLDKAVKLM 543

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I+I  HTD+       + N+ LS  RA +  Q +   G++E+RI    G+   
Sbjct: 544 NFYPDMVINIESHTDSR---GSKKYNYSLSDRRAKATQQYIYSQGIAEERIVSAQGYGEQ 600

Query: 319 RLKIA-------SDPMNSANRRIDILVEDR 341
           RL          SD  +  NRR D ++  R
Sbjct: 601 RLLNECKDGVKCSDEEHDVNRRSDFIILKR 630


>gi|326795240|ref|YP_004313060.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
           MMB-1]
 gi|326546004|gb|ADZ91224.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
           MMB-1]
          Length = 200

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 11/180 (6%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +T+ + S    E+       +    A +     Q        +++ +V D+       + 
Sbjct: 26  ATETDSSSTVAEDSASATEEQSADAAGQEAGSDQSFGAGEDGSITSVVVDDSGSASAVDQ 85

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278
                +  +        FD   SI  PE    L K  E L  + +   +  GH D     
Sbjct: 86  D----VDLLAGVETVFYFDFDKSIVRPEAREALAKHAEFLVANPDARVVLEGHADER--- 138

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
                N  L   RA +  + L   GV+  +I  +S F           D     NRR+++
Sbjct: 139 GTREYNMALGERRAKAVARYLTIQGVAASQIESVS-FGEEVPVAFGHDDASWQLNRRVEV 197


>gi|327405866|ref|YP_004346704.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327321374|gb|AEA45866.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 687

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           IS I+      FD   +I  PE+ + L K+ ++L  +  +   I GHTD       A  N
Sbjct: 564 ISNINPLKNVFFDLDKAILRPESFLELNKLRDLLKANPTMKIEIGGHTDTR---GDAAKN 620

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------PMNSANR 332
            +LS  RA S  + L+  G+   R+S   GF   +  I  D              +  NR
Sbjct: 621 MQLSDARAKSVKEYLIAQGIEASRLSS-KGFGATKPIITDDVINKMATEKEKEKAHQENR 679

Query: 333 RID 335
           R +
Sbjct: 680 RTE 682


>gi|162147969|ref|YP_001602430.1| outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542586|ref|YP_002274815.1| OmpA/MotB domain-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|172046688|sp|P84838|OMPC_GLUDA RecName: Full=Outer membrane protein; AltName: Full=OMPC; Flags:
           Precursor
 gi|161786546|emb|CAP56128.1| Outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530263|gb|ACI50200.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 378

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   S        ++ +  +   H     I + G+TD S   P     + N  LS+ 
Sbjct: 269 VFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNMGLSIR 328

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV    I  I G+      + +  +     NRR++I++
Sbjct: 329 RAQSVKAELIRDGVPTGAID-IHGYGEQHPLVPTGPNTREPQNRRVEIIL 377


>gi|39997403|ref|NP_953354.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
 gi|39984294|gb|AAR35681.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
          Length = 187

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             FD  + +   E   +L    E L  +  V  I  GHTD          N  L   RA 
Sbjct: 83  VYFDFDAWVLNGEAREILAGNAEWLRKNPGVAVILEGHTDER---GSDAYNLALGEQRAK 139

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           SA + L   G+   R++ +S +   +  +    +   + NRR++ +
Sbjct: 140 SAMKYLQTLGIDAGRMTVVS-YGEEKPAVEGHDESAWAGNRRVEFI 184


>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
          Length = 354

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|254475411|ref|ZP_05088797.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214029654|gb|EEB70489.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 627

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+     +   L +I ++LA    V   I+GHTD+         N  LS  RA S 
Sbjct: 499 FEPGSATVAAGSRDTLDQIADILARCDGVRLEIQGHTDSQ---GREEMNQNLSQARAQSV 555

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              L    +     S   G+        +D       NRRI+  +   
Sbjct: 556 LNELRDRRIVTSSFSA-KGYGESTPIATNDTEEGREANRRIEFRLIRP 602


>gi|119896572|ref|YP_931785.1| hypothetical protein azo0281 [Azoarcus sp. BH72]
 gi|119668985|emb|CAL92898.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
          Length = 214

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 24/176 (13%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +      L  E       ++R + L K ++  L+          +             
Sbjct: 38  GVQMELASSLEAEVQKRRVEEQRREALEKALAVPLASGRVTLANGRIGI----------- 86

Query: 229 IDQRNTPMFDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPFRNI---A 281
                + +F  +S    P+   +L      +   LA   E++ + G TD  P R+     
Sbjct: 87  ---SGSVLFALNSDELQPDGRQLLKSLAPPLAAYLASHDEMLMVSGFTDDRPVRDSNRQF 143

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
            DNW LS  RA +  +VL++ GV    +   + F   +   ++      + NRR++
Sbjct: 144 ADNWELSAQRALTVTRVLVEEGVPSAAVFAAA-FGQEQPVASNADADGRARNRRVE 198


>gi|87121845|ref|ZP_01077731.1| flagellar motor aparatus [Marinomonas sp. MED121]
 gi|86162874|gb|EAQ64153.1| flagellar motor aparatus [Marinomonas sp. MED121]
          Length = 258

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +  +  +  S+    S   D              + +  +++  +P             +
Sbjct: 48  LSSIQIAMSSKGANVSQQPDKYSDGGEKVIMPERQEVGIDKDLLVPTTDTASAAEALEAE 107

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L+++          +    +   V        ++I++       +F+   S    ++  
Sbjct: 108 KLEEIKAMAEVVSEQIEITQLSNVVTVLQNGDQLIITV---DGQTLFESGESELSWQSDY 164

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           + +++ ++     E  I+I+GHTD  P R      NW LS  RA +  +  ++ G+   R
Sbjct: 165 IFEELIKMFKFYFEFSINIKGHTDNIPIRTVKFPSNWELSAIRATTVLRYFLEEGIGAQR 224

Query: 309 ISKISGFAHHRLKIA 323
           ++  +G+A       
Sbjct: 225 MTA-TGYADSVPIAP 238


>gi|326773949|ref|ZP_08233231.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
 gi|326636088|gb|EGE36992.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
          Length = 505

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+   P     L+ +   LA       ++I GHTD          N  LS  RA +
Sbjct: 216 FASDSADLAPGAEAQLKTVAGQLAQYPDGGTLTIVGHTDDVQ---DDAYNQTLSEKRANA 272

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
               L +    +   + +SG      K+   SD   + NRR++I +    G
Sbjct: 273 VKTRLAQLTTLDKWQTSVSGKGESEPKVKDTSDEARAVNRRVEITLTPTGG 323


>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
 gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
 gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
 gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
          Length = 374

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 246 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 302

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361

Query: 338 VED 340
           V+ 
Sbjct: 362 VKG 364


>gi|197336770|ref|YP_002158098.1| outer membrane protein [Vibrio fischeri MJ11]
 gi|197314022|gb|ACH63471.1| outer membrane protein [Vibrio fischeri MJ11]
          Length = 208

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 13/186 (6%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K           E   +  +   ++         +     +      L    I      
Sbjct: 30  TKEDAPFPDFENPETAPVEEMETSEMTRALTGPNGELKDDDMRQVAQQLTNMGIQYH--- 86

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276
           +     ++ISI ++ +   F  + +   P    +L K+  V++   E+  +  GHTD   
Sbjct: 87  KVGNDQLVISIQEKVH---FSSAKAELTPLARSLLNKLIVVMSSKPELALVLDGHTD--- 140

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N  LS  R+    + L+ + ++  ++    GF  +     +D +     NRR+
Sbjct: 141 VTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RGFGEYLPLCDNDTILGRKCNRRV 199

Query: 335 DILVED 340
           +I +  
Sbjct: 200 EITILK 205


>gi|89890645|ref|ZP_01202155.1| outer membrane protein [Flavobacteria bacterium BBFL7]
 gi|89517560|gb|EAS20217.1| outer membrane protein [Flavobacteria bacterium BBFL7]
          Length = 659

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 17/191 (8%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +       +   +NY +    +E  +A +  +  +  A  +         D+ V  +  
Sbjct: 476 GEDAAYSFVLECGQNYSIRAQKEEFTIAEEFVQTPKTSATLLQPLAVAKSIDDKVADIKV 535

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 IL       N   FD        +  + LQK+   +      +I IR HTD+  
Sbjct: 536 GDDLNDIL-----DLNMIYFDFDKHNIRYDAEIELQKVLAFMEAYPNSIIDIRSHTDSRA 590

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNS 329
                  N +LS  RA S    L+  G+  +R++   G+  ++L          ++  + 
Sbjct: 591 SDG---YNIKLSDRRAKSTRAYLIMKGIKANRLTA-RGYGEYQLVNECSNGVECTEEQHQ 646

Query: 330 ANRRIDILVED 340
            NRR + ++  
Sbjct: 647 LNRRSEFIIMK 657


>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
 gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
          Length = 379

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 251 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 307

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 308 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 366

Query: 338 VED 340
           V+ 
Sbjct: 367 VKG 369


>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
           M863]
 gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
           TW10509]
 gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
           At Specific Sites In The Shigella Phage Sf6 Virion As
           Structural Components
 gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
           At Specific Sites In The Shigella Phage Sf6 Virion As
           Structural Components
 gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
           At Specific Sites In The Shigella Phage Sf6 Virion As
           Structural Components
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
           EC1212]
 gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
 gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
          Length = 337

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 209 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 265

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 266 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 324

Query: 338 VED 340
           V+ 
Sbjct: 325 VKG 327


>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
 gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
 gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
          Length = 348

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 220 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 277 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKRRAALIDCLAPDRRVEIE 335

Query: 338 VED 340
           V+ 
Sbjct: 336 VKG 338


>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
          Length = 327

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 199 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 255

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 256 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 314

Query: 338 VED 340
           V+ 
Sbjct: 315 VKG 317


>gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii]
          Length = 243

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 124 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 180

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 181 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 239

Query: 338 VED 340
           V+ 
Sbjct: 240 VKG 242


>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
 gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
 gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
 gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
 gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
           2457T]
 gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
 gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
 gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
 gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
 gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
 gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
 gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
 gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
 gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
 gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
 gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
 gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
          Length = 348

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 220 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 277 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 335

Query: 338 VED 340
           V+ 
Sbjct: 336 VKG 338


>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
 gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II; Flags: Precursor
 gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
 gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
          Length = 351

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II
 gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii]
 gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii]
          Length = 243

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 124 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 180

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 181 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 239

Query: 338 VED 340
           V+ 
Sbjct: 240 VKG 242


>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
 gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
 gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
 gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
 gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
 gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
 gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
           substr. MG1655]
 gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
 gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
           substr. W3110]
 gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
 gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
           substr. DH10B]
 gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
 gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
 gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
 gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
 gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
 gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
 gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
 gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
 gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
 gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
 gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
 gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
           [Escherichia coli W]
 gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
 gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II*; Flags: Precursor
 gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II*; Flags: Precursor
 gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
           EDL933]
 gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
 gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
           substr. W3110]
 gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
           substr. MG1655]
 gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
 gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
 gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
 gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
 gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
           substr. DH10B]
 gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
 gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
 gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
 gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
 gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
 gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
 gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
 gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
 gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
 gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
 gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
 gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
           REL606]
 gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
 gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
           str. TW14359]
 gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
 gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
 gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
 gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
           [Escherichia coli DH1]
 gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
           [Escherichia coli W]
 gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
 gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
 gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
           precursor [Escherichia coli DH1]
 gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
 gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
 gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
 gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
 gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
 gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
 gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
 gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
 gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
           E1520]
 gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
           E482]
 gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
           H120]
 gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
           H489]
 gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
           TA007]
 gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
           E1167]
          Length = 346

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|326773950|ref|ZP_08233232.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
 gi|326636089|gb|EGE36993.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
          Length = 569

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 10/208 (4%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+  +      +    D++    +            +            I     K+  
Sbjct: 175 ELAPGEDMTSYLSFGKVDTDTVTVMVPMVGFTTVSVLDAGSAKKAKIDLSIAQAALKQSS 234

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D+ +             +      +     I +++        F   S+   P     L
Sbjct: 235 HDVPELADPVAIERYTRALDDSTSTQAGGKDITVTLASDVT---FASDSADLAPGAEAQL 291

Query: 253 QKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             +   L        ++I GHTD          N  LS  RA +    L +    +   +
Sbjct: 292 NTVASQLGQYPDGGTLTIVGHTDDVQ---DDAYNQTLSEKRANAVKTRLAQLTKLDKWQT 348

Query: 311 KISGFAHHRLK--IASDPMNSANRRIDI 336
            +SG      K    +D   +ANRR++I
Sbjct: 349 SVSGKGESEPKIKDTTDEARAANRRVEI 376


>gi|229837675|ref|ZP_04457837.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
 gi|229704363|gb|EEO91374.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
          Length = 513

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 378 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 434

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +     L  S VS      + G+   R    +D  +    NRR++I +
Sbjct: 435 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRVLNRRVEISL 484


>gi|149185618|ref|ZP_01863934.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
 gi|148830838|gb|EDL49273.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
          Length = 162

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 7/102 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD        E    LQ   +  +       +I GH D          N  L   RA 
Sbjct: 58  VYFDTDRYNIDAEDSAKLQTQAQYFSQYPNVNFTIEGHADER---GTREYNLALGERRAN 114

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           +A   L+  G+   RI  IS +   R     +++   + NRR
Sbjct: 115 AAKNYLVSLGIPASRIRTIS-YGKERPVALGSNEAAWAQNRR 155


>gi|254420406|ref|ZP_05034130.1| OmpA family protein [Brevundimonas sp. BAL3]
 gi|196186583|gb|EDX81559.1| OmpA family protein [Brevundimonas sp. BAL3]
          Length = 183

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDN 284
            ++   ++  F   +S   PE    L +  + L    + +   I+G+TDA+        N
Sbjct: 70  QVVLSDDSVKFPTDASALSPEAEQRLAQFAQRLRDENKNVYLEIQGYTDAT---GPVEHN 126

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
            +L   RA +  + L + GV+ +R+S IS +       ++D       NRR+ I+V  
Sbjct: 127 NQLGEQRAEAVRRFLNRQGVALNRMSTIS-YGPEEPVASNDTPEGRSQNRRVTIVVLA 183


>gi|163783062|ref|ZP_02178057.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881742|gb|EDP75251.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 351

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        E + +L ++ + L  +    + I G TD          N +L++ RA + 
Sbjct: 245 FDFDKYSIRREYVPILNEVVKTLKENEFVKVRIEGFTD---IIGPKEYNEKLAMKRAEAV 301

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L++ G+ ED+I  I GF   R   +++       NRR++ +V
Sbjct: 302 KRYLVEKGIPEDKID-IVGFGKERFIASNEDKIGRLTNRRVEFIV 345


>gi|85703482|ref|ZP_01034586.1| OmpA domain protein [Roseovarius sp. 217]
 gi|85672410|gb|EAQ27267.1| OmpA domain protein [Roseovarius sp. 217]
          Length = 635

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 86/301 (28%), Gaps = 11/301 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN--KIDLSIDEHI 106
           + +     T       +         ++   +  +    +  E  +           + +
Sbjct: 307 VALLAPEGTPQSDFDDVAGKLEADLPDVFALTATLPPPPDTAEPVAPEFVATLSPEGQVL 366

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +  V  +      +   +   ++      ++ +E      +     G ++         
Sbjct: 367 IRGRVGSETSRETVRSFAKARFSSNAVHLTARVAEGLPRDWSIRVLTGLEVLSYLSNGVV 426

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGI 224
               +N  +   +  K  + +  + L D           +     +  V  L        
Sbjct: 427 TVTPDNLSVQGNTGRKSASAEIAQFLSDKLGGAEKYSIDVTYKKALDPVAGLPTPDECEA 486

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            I+ I       F+  S+    +   ++  I ++L    E  + I GHTD+         
Sbjct: 487 QIAEIQSTRKINFEPGSATIDAQGAAIMDDIADILKDCGEIPMVIGGHTDSQ---GREEM 543

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           N +LSL RA +    L    V    I    G+        ++       NRRI+  +   
Sbjct: 544 NEQLSLARARAVLDELRLRRVLTSSIDA-KGYGESTPIADNETEAGRETNRRIEFRLIRP 602

Query: 342 Q 342
           +
Sbjct: 603 E 603


>gi|119776394|ref|YP_929134.1| OmpA/MotB [Shewanella amazonensis SB2B]
 gi|119768894|gb|ABM01465.1| OmpA/MotB [Shewanella amazonensis SB2B]
          Length = 201

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   SS   P+    ++++   +        +I GH   +        N  LS  RA 
Sbjct: 77  VLFPNDSSYLAPQYFGQIEELASFMRQFPNTKVTIEGHCSRT---GGYDYNMELSQRRAN 133

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DIL 337
           +  +VL +  G+   R+  + GF ++     SD   +   NRR+  +I+
Sbjct: 134 AVTEVLTQQYGIESSRLKAV-GFGYNSPVDPSDTPEAHDKNRRVIAEIV 181


>gi|50085693|ref|YP_047203.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
           ADP1]
 gi|49531669|emb|CAG69381.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
           ADP1]
          Length = 193

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 85  FDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDER---GTREYNMALGERRAKAV 141

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +          ++     NRR++I
Sbjct: 142 QSYLITNGVNPQQLEAVS-YGKEMPINPGHNEAAWKENRRVEI 183


>gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
           1044]
          Length = 273

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 145 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 201

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 202 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 260

Query: 338 VED 340
           V+ 
Sbjct: 261 VKG 263


>gi|325105158|ref|YP_004274812.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974006|gb|ADY52990.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 593

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D   S   P+   +L  +  +L  +    I +  HTD+         N RLS  RA SA
Sbjct: 482 YDFDKSDIRPDAARILDNLVNILKQNPSLRIELSSHTDSR---GSDAYNLRLSQKRAESA 538

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            + L+  G+ + R+    GF   +L          +D  +  NRR ++ V  
Sbjct: 539 VKYLVDRGIDKSRLVA-RGFGETKLLNKCANEVDCTDAEHEVNRRTEVKVLK 589


>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
          Length = 365

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352

Query: 338 VED 340
           V+ 
Sbjct: 353 VKG 355


>gi|289761034|ref|ZP_06520412.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
 gi|289708540|gb|EFD72556.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
          Length = 232

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +  +P    +L ++ + L    +  ++I G+TD +        N  LS  R
Sbjct: 127 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 183

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A      L+  GV+ D I+ + G        ++      + NRR++I+V
Sbjct: 184 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 231


>gi|78189866|ref|YP_380204.1| OmpA domain-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78172065|gb|ABB29161.1| OmpA domain protein [Chlorobium chlorochromatii CaD3]
          Length = 205

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291
               F+  S+       + LQ+   +L     E I I GH D    R  +  N  L   R
Sbjct: 98  GDIFFEYDSATLDESAQMQLQQNAALLQQFIVESIQIEGHCD---IRGTSEYNLALGERR 154

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +A + LM+ GV   R+  +S F   R     +     + NRR+  ++
Sbjct: 155 ATTAKEYLMRLGVPASRLETVS-FGEERPFDNGNSEDAWAKNRRVHFVL 202


>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
 gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
          Length = 353

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 225 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 281

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 282 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 340

Query: 338 VED 340
           V+ 
Sbjct: 341 VKG 343


>gi|221640500|ref|YP_002526762.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161281|gb|ACM02261.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 652

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278
                 I  +       F+  S+         L  + EV        + I GHTD+    
Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDRSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  LS  RA +    L    V   R+  + G+   R    +        NRRI+ 
Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGNEEGREANRRIEF 597

Query: 337 LVEDRQG 343
            +    G
Sbjct: 598 TLLGEDG 604


>gi|86142769|ref|ZP_01061208.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85830801|gb|EAQ49259.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 622

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 11/117 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD   +   P+    L K+  ++    E+   +  HTD          N +LS 
Sbjct: 510 KLEKIYFDFDKANIRPDAATTLDKLVALMKKYPEMNVEVASHTDQR---GPEDYNLQLSQ 566

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNS--ANRRIDILVED 340
            RA S    ++  G+   R+    G+       A             NRR +  +  
Sbjct: 567 RRAQSTVDYIVSKGIDRSRLKA-QGYGEQDPINACPSGDCTEEQFDENRRSEFTILK 622


>gi|228469678|ref|ZP_04054646.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
 gi|228308697|gb|EEK17423.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
          Length = 225

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              +   + +G   E+   G  I ++      +F+ SSS     +   L+K  + L  + 
Sbjct: 77  KKELEQQLPEGTQVESVNDGQAIKVVFDSGL-LFNTSSSTLSSSSRNDLRKFADNLNKNH 135

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           + +  I GHTD+       R N  LS DRA S    L   GVS  R+    G   H    
Sbjct: 136 DTVLEIIGHTDS---SGNDRINDPLSRDRAKSVRDFLEGQGVSSTRMK-YEGRGSHEPVD 191

Query: 323 ASDPMNS--ANRRIDILVEDRQ 342
            +        NRR+++ +   Q
Sbjct: 192 TNATAEGKRKNRRVEVFILPSQ 213


>gi|254457990|ref|ZP_05071417.1| OmpA/MotB [Campylobacterales bacterium GD 1]
 gi|207085383|gb|EDZ62668.1| OmpA/MotB [Campylobacterales bacterium GD 1]
          Length = 219

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 11/199 (5%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
               + SE    L  +  + +   K E           I +        +   +     +
Sbjct: 1   MDAKKISEAIGSLSGAMSVLEGGTKTEVSKQRMQQSTPIDSNDESSEAVNRVAQAVIDAN 60

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--- 261
            ++       +  E  + G +I +     + +F   S+    E  ++  K   ++     
Sbjct: 61  EMMEKGHGPAISVEEAQEGFVIEL---PASLLFKSGSATIENEDALLFLKRVALIVEELP 117

Query: 262 STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           ++  +S++GHTD     N    +DNW LS  RA S  Q L+   V   RIS  SGFA ++
Sbjct: 118 NSMQVSVQGHTDNQGPGNNSVFKDNWELSSARAISVLQELLLDSVDPKRISA-SGFAEYK 176

Query: 320 LKIASDPMNSA--NRRIDI 336
               +        NRR+++
Sbjct: 177 PLATNVTEAGREKNRRVEL 195


>gi|111223898|ref|YP_714692.1| hypothetical protein FRAAL4505 [Frankia alni ACN14a]
 gi|111151430|emb|CAJ63147.1| hypothetical protein; putative signal peptide; putative OmpA/MotB
           domain [Frankia alni ACN14a]
          Length = 384

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  S +   P     L  +  VL      + + G+TD       +  N  LSL+RA +A 
Sbjct: 281 FPVSGARLSPSAQARLDSVAAVLRGGDLAVLVGGYTDT---SGPSALNQALSLNRAQAAA 337

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             L   GV  D + + +GF        +      +ANRRI+I+
Sbjct: 338 DYLTSRGVPAD-LVRAAGFGSREPVAGNGTPQGRAANRRIEII 379


>gi|329888176|ref|ZP_08266774.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
 gi|328846732|gb|EGF96294.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
          Length = 330

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  L  +   +  + ++L       +S+ GHTD +        N  LS +RA + 
Sbjct: 228 FALDKADILDASRPQIDAMAQMLKDEAGLRLSVEGHTDNT---GAPARNRPLSEERARAV 284

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
              L + G+   R+    GF   +    +  D   + NRR++++
Sbjct: 285 VAALTQQGIDAKRLEA-KGFGADKPVADNASDEGRARNRRVELV 327


>gi|170750466|ref|YP_001756726.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170656988|gb|ACB26043.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 319

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LP +   +  +  +L       ++I G+TD +     A  N  LS  RA + 
Sbjct: 218 FATDRAEILPASAPQIDAVAALLRTDPGLRLAINGYTDGT---GAAAHNQALSDGRAKAV 274

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L+ +G+++DR+ +  GF       ++D     + NRR++++
Sbjct: 275 VARLVGAGIAKDRL-RAEGFGAASPVASNDSAAGRAQNRRVELV 317


>gi|163738369|ref|ZP_02145784.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|161388290|gb|EDQ12644.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 211

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        VL K    +    E    + GHTDA      A  N  L L RA +A
Sbjct: 68  FAFDSAQLDGNARAVLDKQAHWIRQFPEVRFRVFGHTDAV---GSAGYNKSLGLRRARAA 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  +  F   +  I +      NRR
Sbjct: 125 VNYLVSRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 162


>gi|118591925|ref|ZP_01549320.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
 gi|118435568|gb|EAV42214.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
          Length = 194

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+  S+    + I+ LQ +G+ L           I GHTD    R  A  N  LS  RA+
Sbjct: 88  FEFDSASLTNDGILTLQALGQALQDPRLKNMRFQIAGHTD---LRGTADYNLDLSKRRAF 144

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
              + L     +   ++  + G+   R     +P +  NRR++I+
Sbjct: 145 MVAEFLAAFYTIPRGQLVPV-GYGESRPVDPGNPSSGRNRRVEII 188


>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
 gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane major heat-modifiable protein; AltName:
           Full=Outer membrane protein 33K; Flags: Precursor
 gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|288917360|ref|ZP_06411727.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
 gi|288351225|gb|EFC85435.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
          Length = 409

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 12/290 (4%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           + +     D  T+  +           ++A+  +  +   P   S   +  ++       
Sbjct: 126 LAFSATVPDSATRAQLLGAAADVSGGSVSATVTVDPKVATPALESFGDVARALGRQPGVR 185

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           SV +   S   +             +    +   +        +     +          
Sbjct: 186 SVTIDGSSLVLQGTVADRAAGTVIGAEVLAAVRHRVPDASLDNRLTVGAEV------DLD 239

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                + P++ +              A  +++  +   +     G + E  RT   +   
Sbjct: 240 PATGAVSPVAADSTSDDSAAPGSSVTAPSVTAPSAPDPSATGSAGAVPEAGRTQGALQAA 299

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            +  +  F    S         L K+ + L      + + GHTD++        N  LS+
Sbjct: 300 LEGTSLTFAVGESTLDASVRAGLDKVAQALLPGDLTVLVGGHTDST---GPLAFNQALSM 356

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           DRA +A + L++ GV  +R+ +++GF   R    +      +ANRR+D+ 
Sbjct: 357 DRARAAREYLVQRGVPAERV-RVAGFGPERPVADNATVAGRAANRRVDVT 405


>gi|239995142|ref|ZP_04715666.1| TolC family type I secretion outer membrane protein [Alteromonas
           macleodii ATCC 27126]
          Length = 648

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+  LPE    LQ + E L +     + I GH         A  N RLS  RA + 
Sbjct: 540 FASNSTEVLPEYENSLQDVIEALNNDPNSGVIIHGHAS---LDGDAAYNQRLSERRAKAV 596

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335
             +LM K+ +   RI+ + G+   R  +   SD  N+ NRRI+
Sbjct: 597 ASLLMNKANIEARRITAV-GYGESRPLVDEESDAANARNRRIE 638


>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
          Length = 350

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
 gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
          Length = 365

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352

Query: 338 VED 340
           V+ 
Sbjct: 353 VKG 355


>gi|262198258|ref|YP_003269467.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081605|gb|ACY17574.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 533

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           FD   S   PE++ +L             + +   G+TD        R N  LS  RA S
Sbjct: 427 FDTGQSALDPESMHLLNTQVLPQLEMAGGMYVRIEGNTDNV---GDKRGNQALSEARAQS 483

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
               L++ G++  R+S   G        ++      +ANRR DI+    Q
Sbjct: 484 VLDYLVQKGINAKRLSA-RGNGSDSPVASNKTADGRAANRRTDIVFISGQ 532


>gi|149917241|ref|ZP_01905740.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149821848|gb|EDM81242.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 188

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 14/152 (9%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           + AK I +T      +        E T   I+I          F+  ++     +  +L 
Sbjct: 20  ESAKVIEATELPPPPEPPKVDARVEVTDDKIVIH-----EKIAFEYDAAKIQRVSHDLLA 74

Query: 254 KIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           ++ +V+      E+I + GH  A      A  N  LS  RA +    L+K  GV E R+ 
Sbjct: 75  EVAQVILDNPRIELIRVEGHASAE---GEADHNLELSQRRAEAVRAHLVKKGGVPEARLE 131

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              GF   R    ++       NRR++ ++  
Sbjct: 132 A-EGFGEDRPIADNETEEGRGQNRRVEFVIVR 162


>gi|149186387|ref|ZP_01864700.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
 gi|148829976|gb|EDL48414.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
          Length = 288

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 68/259 (26%), Gaps = 14/259 (5%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
           Q+  D+ +         +++   T +     ++       +     E  +   T      
Sbjct: 28  QDSTDIDVYGSALTEGPEVEGIITARSGDRIQVTMENGQNTTIIVDEGTEVKATGGFLGL 87

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
                 TD   +    E   L          +K K    + A  I        A++    
Sbjct: 88  GSKTLRTDQLMNGLPVEVETLQFQGGLVAKQVKLKASDMETAAMIRGATQQQFAEHRADI 147

Query: 215 VLFETTRTGILISIIDQRNT-------PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
                    +   + +             FD       PE    +  I          + 
Sbjct: 148 DANAAAAEALKGRMANIDQYNVRGVTNVYFDSGKWNISPEGQREICDIASQAEAMDNALL 207

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            + G+TD+         N  LS  RA      L +  G    R+   +G +       + 
Sbjct: 208 LVVGYTDSD---GNEDYNQVLSERRAGRVVNYLQQKCGWQPWRMLTPTGMSESDPAADNS 264

Query: 326 PMN--SANRRIDILVEDRQ 342
                + NRR+ + +   +
Sbjct: 265 TPEGKAQNRRVSVNILVSK 283


>gi|289672566|ref|ZP_06493456.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
          FF5]
          Length = 48

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA 56
          EN+Q IIIK+        ++ G+WKI +ADF T +MAFFLV+W+I++
Sbjct: 2  ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLISS 47


>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
 gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
 gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
 gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
 gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
 gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
 gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
          Length = 358

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
 gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
 gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 356

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G+TD          N +LS
Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 285 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|238782712|ref|ZP_04626742.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
 gi|238716372|gb|EEQ08354.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
          Length = 168

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD       P     +Q IG+ L         + GHTDA         N +LS  R
Sbjct: 61  NKVLFDSDVRKLNPSGEQTVQNIGKALTAVGITHFRVDGHTDAM---GEDSYNQQLSYQR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +    L   G+    I  + G         +      + NRR+ ++V   
Sbjct: 118 AAAVADTLTTIGIPRKNID-VRGRGKLEPVADNRTAKGRAENRRVAMIVTAP 168


>gi|325068016|ref|ZP_08126689.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 553

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 10/208 (4%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+  +      +    D++    +            +            I     K+  
Sbjct: 161 ELAPGEDMTSYLSFGKVDTDTVTVMVPMAGFTTVSVLDAGDAKKAKIDLSIAQAALKQSS 220

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D+ +  +          +            I +++        F   S+         L
Sbjct: 221 HDVPELAAPVAIERYTRALDDSTSTHAGGKDITVTLASDVT---FASDSADLASGAEAQL 277

Query: 253 QKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             +   L        +++ GHTD          N  LS  RA +    L +    +   +
Sbjct: 278 NTVASQLKQHPDGGTLTVVGHTDDVQ---DDAYNQTLSEKRANAVKTRLEQLTSLDKWQT 334

Query: 311 KISGFAHHRLK--IASDPMNSANRRIDI 336
            +SG      K    SD   +ANRR++I
Sbjct: 335 SVSGKGESEPKIKDTSDEARAANRRVEI 362


>gi|302341627|ref|YP_003806156.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
 gi|301638240|gb|ADK83562.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 15/280 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F P   + +  +       NPP RSS   +    DE   K    L               
Sbjct: 84  FQPKIVSDLEGAYTRLVYLNPPGRSSLEVLRNYQDEVAAKGGEILYQCKGEACGGDPARG 143

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK- 187
                   S   +        D       C      +                 +  M  
Sbjct: 144 AAGGGGEQSLMMKLVAPERVTDDYFSPGGCALQSRIRDQRYFAARIPADGGDAYLALMTW 203

Query: 188 ------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                   +   D A  ++  +     +  +  V      + +            FD   
Sbjct: 204 VSTSSGSCRAFNDRAFTLAVLIEPKAREQKMVTVKAAEMASNLDSQGRIALYGVHFDFDK 263

Query: 242 SIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           ++  PE+   LQ     + A     I + GHTD          N  LS  RA +  + L 
Sbjct: 264 AVVKPESRPTLQEIAALLAADPALEILVVGHTDNQ---GGFAYNVELSQRRAQAVVKALT 320

Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              GV+  R++   G        ++D     + NRR++++
Sbjct: 321 GDFGVAPGRLTPF-GAGMAAPTASNDSEEGRAKNRRVELV 359


>gi|256420785|ref|YP_003121438.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256035693|gb|ACU59237.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 586

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
           ++         ++ +  I  P +   L K+  +L    ++ I I  HTD +     A  N
Sbjct: 466 VNTAITMQEIYYEVNEFILTPASHPALDKLVALLKDHPQMEIEISAHTDNT---GSAAYN 522

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDI 336
            +LS  RA +    L+  G+ + R+ +  G+   +    +              NRRI++
Sbjct: 523 QQLSEKRALNCVAYLVDKGIDKKRL-QYKGYGATKPVAPNTNPDGTDNPEGRRLNRRIEL 581

Query: 337 LVED 340
            +  
Sbjct: 582 RILK 585


>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
 gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
          Length = 370

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 242 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 298

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357

Query: 338 VED 340
           V+ 
Sbjct: 358 VKG 360


>gi|319952716|ref|YP_004163983.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421376|gb|ADV48485.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 337

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   P+   ++ +I  +L  +    +SI GHTD+         N +LS+DRA + 
Sbjct: 236 FDTDKATLKPDGETLVAEIFTLLNENDSLKLSIEGHTDS---SGNVERNKQLSMDRANTV 292

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   G++ +R++   GF        +D     + NRR++++
Sbjct: 293 LYTLAGKGIAINRLTA-KGFGAKNPISPNDSEENKAKNRRVELV 335


>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
 gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
          Length = 351

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 223 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDTYNQGLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  D+IS   G             +    +A       +RR++I 
Sbjct: 280 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGSTCDNVKARAALIDCLAPDRRVEIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|312962752|ref|ZP_07777240.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
 gi|311282969|gb|EFQ61562.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
          Length = 166

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + L+  GV+  ++  +S +   R           + NRR+++
Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGHDEQSWAQNRRVEL 164


>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II; Flags: Precursor
          Length = 351

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|218778866|ref|YP_002430184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760250|gb|ACL02716.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 281

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 70/196 (35%), Gaps = 35/196 (17%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD------NIVKGVLFETTRTGILISIID 230
           P     + A  + + L+     +       + D           V   +T  G LISI D
Sbjct: 62  PGGLSPMDAEGKGRSLKPPIHPLMDAEDESLPDFVGLSAESSNQVDIRSTGNGSLISIRD 121

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSL 289
           Q    +F+  +S   P     L ++ E++      + I GHTD  P      + NW LS 
Sbjct: 122 QL---LFEDGASSIKPSAKAFLTRLAEIINADNFPVVITGHTDDRPPEEKGVQSNWELSA 178

Query: 290 DRAYSAYQVLMKS--------------GVS--------EDRISKISGFAHHRLKIASDPM 327
            RA + Y+                   GV+          RI  + G    +   ++D  
Sbjct: 179 RRAMAVYRFFYDQYLEQLAAREREANGGVAPVNLPNKYPKRID-VYGCGPSQPVASNDTP 237

Query: 328 --NSANRRIDILVEDR 341
              + N R++IL++ R
Sbjct: 238 QTRALNNRVEILMDKR 253


>gi|15594625|ref|NP_212414.1| flagellar motor protein MotB [Borrelia burgdorferi B31]
 gi|195941366|ref|ZP_03086748.1| flagellar motor protein MotB [Borrelia burgdorferi 80a]
 gi|216264425|ref|ZP_03436417.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
 gi|218249216|ref|YP_002374803.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
 gi|221217732|ref|ZP_03589200.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
 gi|223888999|ref|ZP_03623590.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
 gi|224533159|ref|ZP_03673759.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
 gi|224533695|ref|ZP_03674283.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
 gi|225549020|ref|ZP_03769995.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
 gi|225550090|ref|ZP_03771050.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
 gi|226320581|ref|ZP_03796141.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
 gi|226321598|ref|ZP_03797124.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
 gi|1165265|gb|AAA85604.1| MotB [Borrelia burgdorferi]
 gi|1185054|gb|AAB58963.1| flagellar motor apparatus [Borrelia burgdorferi]
 gi|2688186|gb|AAC66668.1| flagellar motor rotation protein B (motB) [Borrelia burgdorferi
           B31]
 gi|215980898|gb|EEC21705.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
 gi|218164404|gb|ACK74465.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
 gi|221192409|gb|EEE18628.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
 gi|223885815|gb|EEF56914.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
 gi|224511886|gb|EEF82287.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
 gi|224512988|gb|EEF83351.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
 gi|225369202|gb|EEG98655.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
 gi|225370246|gb|EEG99684.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
 gi|226232787|gb|EEH31540.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
 gi|226234000|gb|EEH32721.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
 gi|312147980|gb|ADQ30639.1| flagellar motor apparatus [Borrelia burgdorferi JD1]
 gi|312149596|gb|ADQ29667.1| flagellar motor apparatus [Borrelia burgdorferi N40]
          Length = 260

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAAD---AFFDSASADVKLEENRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +      L+       I GHTD   +      + NW LS  R+ +        L +S
Sbjct: 148 IQKIASFIGFLSPRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 DVKRIENNFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|254487047|ref|ZP_05100252.1| OmpA family protein [Roseobacter sp. GAI101]
 gi|214043916|gb|EEB84554.1| OmpA family protein [Roseobacter sp. GAI101]
          Length = 191

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F   S    P+    L +  +     +    I GHTD+         N +LSL+RA S 
Sbjct: 93  FFKTDSYRIHPQGKARLAEFFKSTGAVS--YIISGHTDSR---ASDAYNMKLSLNRANSV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             +  +SG    RI+ + G+       ++      + NRR++I+
Sbjct: 148 AAIAQQSG---ARIADVRGYGERIPAASNSTAAGMAKNRRVEII 188


>gi|295134914|ref|YP_003585590.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
 gi|294982929|gb|ADF53394.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
          Length = 618

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 11/116 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + +   F+ +     P     L  I  VL    E+   I  HTD+         N  LS 
Sbjct: 504 KIDPIFFEFNEYDIRPRAAKQLDHIVYVLESFPEMKIKIESHTDSR---GSDTYNLLLSQ 560

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           +RA S    L+  G++E+RI  I G+    +          +D  +  NRR + ++
Sbjct: 561 NRAKSTKNYLISRGIAENRIVSIKGYGEIEILNRCVNGVECNDEEHEENRRSNFII 616


>gi|149286|gb|AAA25119.1| outer membrane protein II [Klebsiella pneumoniae]
          Length = 243

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G+TD          N +LS
Sbjct: 124 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 180

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 181 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 239

Query: 338 VED 340
           V+ 
Sbjct: 240 VKG 242


>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
 gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
 gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
 gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
          Length = 354

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|116623181|ref|YP_825337.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226343|gb|ABJ85052.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 911

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
              D      F+ +SSI       +L+    +  H    + + GHTD   +   A  N +
Sbjct: 27  QTKDDWEEINFEFNSSILSDGYPSLLRLADLLSQHRDYKVKVTGHTD---YVGSAAYNDK 83

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           L+L RA +    L+K GV + +++  SG       + +        NRR+D+ V D  G
Sbjct: 84  LALRRADAVKAFLVKYGVGDAQVTT-SGDGKRSPIVDNKTKEGRFMNRRVDLAVTDGSG 141


>gi|184159157|ref|YP_001847496.1| outer membrane protein [Acinetobacter baumannii ACICU]
 gi|213158280|ref|YP_002320331.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB0057]
 gi|215482606|ref|YP_002324798.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB307-0294]
 gi|239501025|ref|ZP_04660335.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii AB900]
 gi|301346652|ref|ZP_07227393.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB056]
 gi|301513292|ref|ZP_07238529.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB058]
 gi|301596453|ref|ZP_07241461.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB059]
 gi|183210751|gb|ACC58149.1| Outer membrane protein [Acinetobacter baumannii ACICU]
 gi|193078077|gb|ABO13012.2| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii ATCC 17978]
 gi|213057440|gb|ACJ42342.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB0057]
 gi|213988269|gb|ACJ58568.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           AB307-0294]
          Length = 187

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 79  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ SGV+  ++  +S +           +     NRR++I
Sbjct: 136 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 177


>gi|114327023|ref|YP_744180.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
 gi|114315197|gb|ABI61257.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
          Length = 361

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   +        ++ +            I + G+TD        + N RLS+ RA 
Sbjct: 258 VFFDWDRADLTARAREIVAEAARASTQVQATRIEVNGYTDK---SGTPQYNQRLSVRRAQ 314

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           S    L+K GV  + I  I GF      + +        NRR++I++
Sbjct: 315 SVAAELVKDGVPRNVIF-IHGFGETHPLVPTAQGVREPQNRRVEIIL 360


>gi|60115453|dbj|BAD90019.1| MotB [Pectobacterium carotovorum subsp. carotovorum]
          Length = 175

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 65/167 (38%)

Query: 11  NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
             Q  II+KK       ++ GSWKI YADFMT +MA FLVMW+I  +       I +YF 
Sbjct: 2   KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              K  +T+     D  +P      +      +      + +++      +    R   +
Sbjct: 62  TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
               ++ +      + L    ++G  +       + + K  +  + P
Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEP 168



 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +LT  S+                +++      +  + +     + RL  L +++   +
Sbjct: 65  KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124

Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
                   +   +L E    G+ I IID +N PMF   S+   P    +L+
Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILR 175


>gi|56696346|ref|YP_166703.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
 gi|56678083|gb|AAV94749.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
          Length = 415

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+   PE+ V+L  + + L  +    I I GH+ +      A  N  LS  RA S 
Sbjct: 314 FNYDSAAIRPESAVLLNALADGLRGTDAARIEIVGHSSSE---GAAEYNRALSQRRAASV 370

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L+  G++ DR+    G        ++        NRR+++
Sbjct: 371 VAALVDMGLAADRL-AALGKGEDEPIASNADEAGRSLNRRVEV 412


>gi|89070199|ref|ZP_01157527.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
 gi|89044215|gb|EAR50366.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
          Length = 623

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 19/304 (6%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +     T+ +    +         +L      +      P     +           +
Sbjct: 305 VSLVAALGTEQEAFDRVVGELENSLPDLFALEAVL----PQPPEEGDDGPVEFTATRSPE 360

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
             V L+    +               ++S  +   + +          +    +    + 
Sbjct: 361 GGVQLRGQVGDDLVNTTAENFARAKFADSDITMGTRLAEDLPQGWSVRVLAGLEALSKLE 420

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI---- 224
                  P     + ++  R    +     I         +  V           +    
Sbjct: 421 HGAVTVTPDRVDVRGVSGLRDASGEISRLLIGKFGESADFEIDVTYEEAFDPLAALPTPE 480

Query: 225 ----LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
                I  I       FD  S+    ++  V+  I EVL   T+  I + G+TD+     
Sbjct: 481 ECLAKIKAISDTRKITFDPGSADIDGDSQRVVDDIAEVLRQCTDLEIEVAGYTDSQ---G 537

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               N RLS  RA +    L    V       + G+        +D       NRRI+  
Sbjct: 538 REEMNQRLSQQRAEAVLAALRLRRVPVGAFRAV-GYGEAEPIADNDTAEGREANRRIEFR 596

Query: 338 VEDR 341
           + + 
Sbjct: 597 LIEP 600


>gi|99078059|ref|YP_611317.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99035197|gb|ABF62055.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 653

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 19/301 (6%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +     T +     +          +      + +    PE ++ + I         +
Sbjct: 307 VTLVAAQGTPEALFDRVVGELENALPQVFVLHAVLPE----PEETTADIIPEFTATLSPE 362

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
             V L+   ++  ++            +       +NS          +  + D    + 
Sbjct: 363 GQVQLRGRLSDNAQKRTVDSYAKARFGSDTVYVATRNSPDLPGVWPIRVLAALDALAQLE 422

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL--- 225
           +      P L   + ++       +               D  +           ++   
Sbjct: 423 RGSVTVTPELVAVRGMSHVENASAEIARMLSQKLGEAEDYDLDITFEKPPEPEDKLMAPQ 482

Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
                ++ I + +   F+  S+    ++  V+ KI ++L    E  + I+GHTD+     
Sbjct: 483 LCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQ---G 539

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               N  LS  RA S    L    +         G+       ++D       NRRI+  
Sbjct: 540 REEMNQNLSQARAQSVLNALRARRILTGSFVA-RGYGEDNPIASNDTEEGREANRRIEFR 598

Query: 338 V 338
           +
Sbjct: 599 L 599


>gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024]
          Length = 267

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 139 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 195

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 196 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 254

Query: 338 VED 340
           V+ 
Sbjct: 255 VKG 257


>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
 gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
 gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
 gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
           [Escherichia coli ATCC 8739]
 gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
 gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
 gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
          Length = 365

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 237 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352

Query: 338 VED 340
           V+ 
Sbjct: 353 VKG 355


>gi|148262600|ref|YP_001229306.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146396100|gb|ABQ24733.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 199

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 7/174 (4%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           ++  +P     K       K + +        +      ++  G +  T           
Sbjct: 30  KDEVVPAAEPVKSAETSTVKPVLNETGIKDQPIKEAPITSLPGGDIANTNTANADARPEA 89

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 FD  S    P     L    +++       I I GH D          N  L  
Sbjct: 90  ALEKIFFDFDSYALTPIARDTLTNNAKIMGKRAGVKIQIEGHCDEL---GSDEYNLALGE 146

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
            RA SA Q L+  GV   R+  +  +   +       +   + NRR + ++  +
Sbjct: 147 KRAKSAMQYLVTMGVPAQRL-AVISYGKEKPADPGHGEAAWAKNRRNEFVIISK 199


>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
 gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
 gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
 gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
          Length = 374

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 246 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 302

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361

Query: 338 VED 340
           V+ 
Sbjct: 362 VKG 364


>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 350

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +      P  +       +RR++I 
Sbjct: 279 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
 gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
          Length = 360

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 232 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 288

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  D+IS   G             +    +A       +RR++I 
Sbjct: 289 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 347

Query: 338 VED 340
           V+ 
Sbjct: 348 VKG 350


>gi|260768264|ref|ZP_05877198.1| outer membrane protein [Vibrio furnissii CIP 102972]
 gi|260616294|gb|EEX41479.1| outer membrane protein [Vibrio furnissii CIP 102972]
          Length = 176

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 7/156 (4%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           +     +   LQD           +         +       ++ +   ++   +F   S
Sbjct: 2   EAPQANQIADLQDDDSDGVVNARDICPGTPSGAEIDNDGCGEVIRNSAKRQLHILFANDS 61

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
               P     +Q + E L       I I+G+T           N  LS  RA +  + L+
Sbjct: 62  YEINPVFADQIQAMAEFLKTYQSASIEIQGYTSKV---GTNEYNQELSQKRAEAVERKLL 118

Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
             G+S  R+ +I GF   RL    D    ++ NRR+
Sbjct: 119 SYGISPKRV-RIIGFGETRLLDDGDTNSAHAVNRRV 153


>gi|149925995|ref|ZP_01914258.1| OmpA/MotB [Limnobacter sp. MED105]
 gi|149825283|gb|EDM84494.1| OmpA/MotB [Limnobacter sp. MED105]
          Length = 179

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+    E    L    +VL++       I + GH DA      A  N  LS +RA 
Sbjct: 78  FQLGSAELPAELKKQLDVFAQVLSNRPSDSPPIVVTGHADA---SGDASLNQVLSSERAK 134

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +    L + GVS  R+ ++ G    +L   ++P   ANRR++I
Sbjct: 135 AVKTYLTQKGVSP-RLLRVEGKGAEKLVDVNNPFAPANRRVEI 176


>gi|90021493|ref|YP_527320.1| NAD-dependent DNA ligase [Saccharophagus degradans 2-40]
 gi|89951093|gb|ABD81108.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 195

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 3/118 (2%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            I    +   F+  S     E    L+K+      S     +      +        N  
Sbjct: 74  EITHIEDVVYFEFDSKELTAEAEQKLEKLANEAKKSENENIVVVLKGFADATGPEEYNQE 133

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS +RA +    L  +GV E R   +           +D     + NRR+ +++E  +
Sbjct: 134 LSKERAQNVKAFLESNGV-EAREYNVVALGESNPVADNDTKQGRAQNRRVVLVIEPTE 190


>gi|157374383|ref|YP_001472983.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157316757|gb|ABV35855.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 189

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ + +  +      L ++ + L      + + G+TDA         N +LS  RA +  
Sbjct: 85  FEFAKAEVMFSQWKTLARLKQFLQRFDVNLCLLGYTDAM---GSLDLNQKLSAQRAMAVK 141

Query: 297 QVLMK-SGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           Q+L++  G S  R   + G        +++     ++NRR++ +V+
Sbjct: 142 QILVEDYGFSSSRFV-VKGMGSESPIASNEKPEGRASNRRVEFVVD 186


>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
 gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
          Length = 358

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|218780987|ref|YP_002432305.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218762371|gb|ACL04837.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 199

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 7/140 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +S             + +     + +        F   SS   PE + +L+     L  +
Sbjct: 64  VSEEPMGGDTGPEAVKPSVNVDEMRVRFNTENVHFAFDSSDLSPEAMAILKDKAFFLRLN 123

Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                 I+GH D          N  L   RA SA   L   G+   RI+ IS +      
Sbjct: 124 PSKGVLIKGHCDER---GSLEYNLALGDRRANSAKNFLTDLGIDARRINTIS-YGEEMPL 179

Query: 322 --IASDPMNSANRRIDILVE 339
              +++   + NRR +  +E
Sbjct: 180 DPASNEAAWAVNRRCEFALE 199


>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
 gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
 gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
          Length = 358

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|294651148|ref|ZP_06728483.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292822980|gb|EFF81848.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 255

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+I       +L ++   L       + I GHTD+      A  N  LS +RA + 
Sbjct: 154 FESGSAILTETGKRILDEMAVALNKVGGKQVKIIGHTDS---SGDASRNVILSKERAVAV 210

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   ++ DR+S   G         +   +    NRRI+  V 
Sbjct: 211 QDYLVSKNIATDRLST-EGKGSSEPIADNATADGRRKNRRIEFEVL 255


>gi|149911588|ref|ZP_01900201.1| outer membrane protein OmpA [Moritella sp. PE36]
 gi|149805367|gb|EDM65379.1| outer membrane protein OmpA [Moritella sp. PE36]
          Length = 303

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           +I      +  +F  +S+     + +         +H    + I  +TD          N
Sbjct: 184 VIVPTTLNSNTLFKFNSAEISDSSALAKLAKKMSASHVEINVEIVAYTDT---SGPEAYN 240

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            +LS  RA +     +K GV+  ++   +         ++        NRR+DI+
Sbjct: 241 LKLSKKRAEAVRDYFIKQGVN-KQVINTAWKGEANPIASNKTRAGRIKNRRVDII 294


>gi|146300030|ref|YP_001194621.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146154448|gb|ABQ05302.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 712

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 101/303 (33%), Gaps = 27/303 (8%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           D    K I+       K  +       D +   E ++    D    E+ T N+V      
Sbjct: 416 DIYQFKEIKDLIVEDCKQFIAGVITDIDTKLALESATVILQDS---ENKTLNTVTTSADG 472

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                        +        +E    +L +  +K  D   +    + I  EE      
Sbjct: 473 KFSFTAACETSYKVSAFKEKYTNESVTLTLDKTRDKINDASLALKSLEVIKLEEKEKAEK 532

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGL------------VADNIVKGVLFETTRTGIL 225
             +++I+  +  K+  +LA                        + + + +  E       
Sbjct: 533 KRQQEIIIEEENKKKTELAAIELKKKEKKAKEAEIAAAEVRKNEKVKEILEKEKDVIRDK 592

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
             +I + +   FD +      E+ VVL ++ E++     + I I  HTD+       + N
Sbjct: 593 DRLIIKTDPIYFDYNLWYIRKESKVVLGRVVELMKKYPGMVIEIGSHTDSR---GNEKFN 649

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-------ANRRIDIL 337
             LS  RA S  + +++SG+   RIS   G+      I     ++        NRR + +
Sbjct: 650 ADLSQKRANSTREFIIQSGIEAKRISA-KGYGESVPIIKCKTDDACSEEEHELNRRSEFV 708

Query: 338 VED 340
           ++ 
Sbjct: 709 IKS 711


>gi|298506340|gb|ADI85063.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens
           KN400]
          Length = 187

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             FD  + +       +L    E L  +  V  I  GHTD          N  L   RA 
Sbjct: 83  VYFDFDAWVLNGAAREILAGNAEWLRKNPGVAVILEGHTDER---GSDAYNLALGEQRAK 139

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           SA + L   G+   R++ +S +   +  +    +   + NRR++ +
Sbjct: 140 SAMKYLQTLGIDAGRMTVVS-YGEEKPAVEGHDESAWAGNRRVEFI 184


>gi|148975972|ref|ZP_01812761.1| Conserved hypothetical outer membrane protein [Vibrionales
           bacterium SWAT-3]
 gi|145964717|gb|EDK29970.1| Conserved hypothetical outer membrane protein [Vibrionales
           bacterium SWAT-3]
          Length = 211

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 13/156 (8%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L ++++    +L + ++   S  +     K  +    R G+L  I        F     
Sbjct: 56  ALQIEQQSDSNELKQALARQSSLGINKTGCKTWISSQDRHGLLARIH-------FAFDQH 108

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              P     L ++   L  S   +++ GHTD+         N  L + RA +    L+  
Sbjct: 109 SLTPMGSKALSQLASELQTSGSSVTVDGHTDS---SGDEGYNQALGMQRALTTSDALIVD 165

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           GV +  +  I  F   +   +++ +     NRR +I
Sbjct: 166 GVDKHHLV-IRSFGESKPIASNETVEGRANNRRAEI 200


>gi|45655964|ref|YP_000050.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45599197|gb|AAS68687.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 687

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 82/227 (36%), Gaps = 8/227 (3%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           + +++G    ++            +++       ++ T+       +   T + +     
Sbjct: 461 LPIQVGEGKTEETKIEQPIENQKPNSAALKVIVADASTKQIIPDAKVTLFTPMNRKGESL 520

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
                      K L     +     +K IS +++ +  +    G +    +    +  + 
Sbjct: 521 VQDADKKSFLIKKLPDNDFELFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVY 580

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+ + +    E   +L  +   L  ++++ I I GHTD          N RLS 
Sbjct: 581 NLR-VYFEFNKTKITEENKKLLDPLVGYLLKNASDKIEIGGHTDNV---ASKEYNTRLSA 636

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
            RA + Y+ L+  G+ E R+ +I  + + +    ++     + NRR+
Sbjct: 637 KRARNVYEYLLSKGIPEKRM-RIRAYWYSQPDADNETETGRAKNRRV 682


>gi|293410201|ref|ZP_06653777.1| flagellar motor protein MotB [Escherichia coli B354]
 gi|291470669|gb|EFF13153.1| flagellar motor protein MotB [Escherichia coli B354]
          Length = 58

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 31/57 (54%)

Query: 9  QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAI 65
          +     II+ K+          GSWKI YADFMT +MAFFLVMW+I+ +       I
Sbjct: 2  KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQI 58


>gi|15618690|ref|NP_224976.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           CWL029]
 gi|15836314|ref|NP_300838.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           J138]
 gi|16752260|ref|NP_445628.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           AR39]
 gi|33242140|ref|NP_877081.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
           pneumoniae TW-183]
 gi|4377090|gb|AAD18919.1| Peptidoglycan-Associated Lipoprotein [Chlamydophila pneumoniae
           CWL029]
 gi|7190005|gb|AAF38862.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           AR39]
 gi|8979154|dbj|BAA98989.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           J138]
 gi|33236650|gb|AAP98738.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
           pneumoniae TW-183]
          Length = 192

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S      E + +L  +   +  + +  + I GHTD       A  N  L   RA +
Sbjct: 88  FATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDER---GAASYNLALGARRANA 144

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             + L K G+S DR+S IS +       +  ++     NRR +  +  R
Sbjct: 145 IKEHLRKQGISADRLSTIS-YGKEHPLNSGHNELAWQQNRRTEFKIHAR 192


>gi|323497295|ref|ZP_08102314.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
 gi|323317652|gb|EGA70644.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
          Length = 205

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 13/190 (6%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +         D     + E  Y       +   +       Q  A       S L+ + 
Sbjct: 20  QDIANMTEDMLDTAPKTDFEVRYPEWGNDPKVAQSGVEGPMGQTRAPYYKDLQSFLLKNG 79

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-R 269
           +   VL       I++ + D      F+  SS  +P++   L  +GE L+    +  +  
Sbjct: 80  VDYEVL---PGNHIMVKLKDTIK---FNTGSSQVMPDSAYWLDMMGEYLSTQPGIDIVID 133

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GH D++        N  LS+ RA +  Q L+++ V+ D I    G+       ++  M  
Sbjct: 134 GHADST---GAPSFNDSLSMKRAKAVKQQLVRNNVAMDSIFT-RGYGEFVPACSNASMAG 189

Query: 330 A--NRRIDIL 337
              NRR+++L
Sbjct: 190 KACNRRVEVL 199


>gi|319952843|ref|YP_004164110.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421503|gb|ADV48612.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 644

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S    +   +++K+   L       I I  HTDA         N  LS 
Sbjct: 531 NLEKIYFDFDQSYIRKDAQAIMEKVVAYLNQYPNTKIRIGSHTDAR---ANDNYNLSLSE 587

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-----NSANRRIDILVED 340
            RA + Y  L+K G+   R+    GF   +L     ++       +  NRR + +V +
Sbjct: 588 RRANATYDYLVKKGIDASRL-TFKGFGETQLTNACDNNTNCSSEKHQLNRRSEFIVVE 644


>gi|298292993|ref|YP_003694932.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
 gi|296929504|gb|ADH90313.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
          Length = 164

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   +   P+    L K  + L H      +I GH D          N  L   R
Sbjct: 55  DRVFFDSDQTDLTPQAQATLDKQAQWLNHYGKYTFTIEGHADER---GTREYNIALGARR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343
           A S    L++ GVS  R+  IS +   R     +D    S NRR  + V +  G
Sbjct: 112 AQSVRDYLVQRGVSASRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVLNATG 163


>gi|238024317|ref|YP_002908549.1| hypothetical protein bglu_2g09050 [Burkholderia glumae BGR1]
 gi|237878982|gb|ACR31314.1| OmpA/MotB [Burkholderia glumae BGR1]
          Length = 236

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             S      +K+++      K +   L+G +A            R  ++   I      +
Sbjct: 43  EASSRLADEIKQRQLETQRRKTLEQALAGPLAAG----------RVTLVDGRIGISGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPF---RNIARDNWRLSL 289
           F  +S    P+   +L+     +   L    +++ + G  D            DNW LS 
Sbjct: 93  FAVNSDQLQPQGRALLRSLAGPLSAYLRDRDQILMVSGFADDQQVHAGNARFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           +RA +  +  +++GV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 ERALTVTRAFIEAGVPAGSVFAAA-FGSEQPVSSNADEAGRAKNRRVEI 200


>gi|189347522|ref|YP_001944051.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
 gi|189341669|gb|ACD91072.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
          Length = 349

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 8/140 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +        +  V  +     I  +         FD + +   P +   L +I ++L  
Sbjct: 212 IIETRPMQQKMVTVSADEMSRSITSTGKVSLYGIYFDTNKADIKPASKPALGEIAKLLKK 271

Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              +   + GHTD          N  LS  RA +   VL K  G++  R++  +G A+  
Sbjct: 272 QPAMKLHVVGHTDN---AGGYEFNVSLSKRRADAVVGVLQKEYGIAPGRLTA-NGVAYLA 327

Query: 320 LKIAS--DPMNSANRRIDIL 337
              ++  +   + NRR++++
Sbjct: 328 PVASNAAEAGRAKNRRVELV 347


>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 350

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIV---VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE       L      L      + + G TD          N  LS
Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYIQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|332292958|ref|YP_004431567.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171044|gb|AEE20299.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 640

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + N   F+ +           LQ+I +++      +I I  HTD       A  N  LS 
Sbjct: 524 KINPINFESNRYAINIFAAQQLQRIIDIMNEYPALIIKIESHTDQR---GGASYNQTLSE 580

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANRRIDILVEDR 341
           +RA S    L+K+G++  RI    GF   R     D  +          NRR D +V  R
Sbjct: 581 NRATSTRDYLIKNGITSSRIESAKGFGESRPIHICDEADDSCTEVQYLENRRSDFIVVSR 640


>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
           coli M718]
 gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
           coli M718]
          Length = 375

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 247 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 303

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362

Query: 338 VED 340
           V+ 
Sbjct: 363 VKG 365


>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
          Length = 356

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 228 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 285 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
 gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
 gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
 gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
 gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
 gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
           precursor [Escherichia coli O55:H7 str. CB9615]
 gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
 gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
 gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
 gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
 gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
 gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
 gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
 gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
 gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
 gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
 gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
 gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
           precursor [Escherichia coli O55:H7 str. CB9615]
 gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
 gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
 gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
 gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
 gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
 gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
 gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
 gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
 gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
           1125]
          Length = 354

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|254253774|ref|ZP_04947091.1| OmpA/MotB [Burkholderia dolosa AUO158]
 gi|124898419|gb|EAY70262.1| OmpA/MotB [Burkholderia dolosa AUO158]
          Length = 232

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+   P     L K+           I + G+TDA         N  LS  R
Sbjct: 126 GDAYFATDSATLTPAARAALDKLLNRQGDRHFSRIEVTGYTDAV---GSDAYNVALSRRR 182

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           A +    L + G++ D     +G        ++        NRR++I ++ 
Sbjct: 183 ADAVAAYLRERGLNADSFVA-TGKGKADPGASNATAEGRASNRRVEISLQK 232


>gi|149185339|ref|ZP_01863656.1| outer membrane protein [Erythrobacter sp. SD-21]
 gi|148831450|gb|EDL49884.1| outer membrane protein [Erythrobacter sp. SD-21]
          Length = 210

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   +  L       G+    T  G  I +++  +   F   S+         L  +   
Sbjct: 56  MDQQIKELEEQTAGSGIDVSETDGGNAI-LVNLPDGVTFATGSATINSAFRNTLDNVAAN 114

Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       I + G+TD +        N RLS  RA +    L+  GVS  RI +  G+  
Sbjct: 115 LVQYPNSLIDVYGYTDTT---GSDSLNQRLSEQRAQAVANYLISRGVSSSRI-RWQGYGE 170

Query: 318 --HRLKIASDPM--NSANRRIDILV 338
               LK+ +        NRR++I +
Sbjct: 171 QYEHLKVKTADGVNEPMNRRVEIKI 195


>gi|113868486|ref|YP_726975.1| outer membrane protein and related peptidoglycan-associated
           proteins [Ralstonia eutropha H16]
 gi|113527262|emb|CAJ93607.1| outer membrane protein and related peptidoglycan-associated
           proteins [Ralstonia eutropha H16]
          Length = 177

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +  +   E    +Q++G  L     E + + GHTD       A  N  LS+ R
Sbjct: 70  DKLLFGFNEDLIDAERAANVQRLGRALKGAGIERLRVDGHTDD---AGSAEYNQSLSVRR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  ++L  +G + + I ++ G    R    +        NRR+ I+V
Sbjct: 127 AEAVARLLAGAGFAPENI-EVRGRGKSRPVADNRTAAGRSENRRVAIVV 174


>gi|119953079|ref|YP_945288.1| flagellar motor protein MotB [Borrelia turicatae 91E135]
 gi|119861850|gb|AAX17618.1| chemotaxis MotB protein [Borrelia turicatae 91E135]
          Length = 262

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245
           +K  Q      + ++   +       V+      G+++S++       FD +S+      
Sbjct: 89  EKNKQASQASKNKSIIEFIEKIQSNRVIVRHYERGVVVSLLAD---AFFDSASAEVKLDD 145

Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             ETI  +      L +      I GHTD        I + NW LS  RA +  + ++  
Sbjct: 146 NRETIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205

Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              + +I        +SGFA  R     D       NRRIDIL+   
Sbjct: 206 -TDQSKIQSIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251


>gi|114769969|ref|ZP_01447579.1| OmpA domain protein [alpha proteobacterium HTCC2255]
 gi|114549674|gb|EAU52556.1| OmpA domain protein [alpha proteobacterium HTCC2255]
          Length = 210

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            ++      L  +    G L + T   +++++ +      FD  SS         L ++ 
Sbjct: 52  NELDVQEEELRKNLEGSGALIKNTGNQLIVTLPEAIT---FDIDSSEVRYSLEDTLIRLS 108

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L       + I GHTD          N +LS  RA S   +L ++ VS  RI    G 
Sbjct: 109 KSLNKYPKTNVEIIGHTDNV---GGQDYNQKLSTRRAESVSSILAQNDVSRSRIKAY-GR 164

Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339
                 ++++     ++NRR++I++ 
Sbjct: 165 GEIEPMMSNNSSKGRASNRRVEIMIT 190


>gi|229589734|ref|YP_002871853.1| hypothetical protein PFLU2242 [Pseudomonas fluorescens SBW25]
 gi|229361600|emb|CAY48478.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 295

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LP++   ++++ ++L       ++I G+TD +        N  LS DRA + 
Sbjct: 193 FATDQTRILPDSQPQIEQLSQLLKQDASLKLAINGYTDRT---GDPAHNKTLSYDRAKAV 249

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              +   G+   R+S   GF        +      + NRR++++
Sbjct: 250 VAAITAKGIDAARLSAA-GFGDADPVADNVTEAGKAQNRRVELV 292


>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 369

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356

Query: 338 VED 340
           V+ 
Sbjct: 357 VKG 359


>gi|89890649|ref|ZP_01202159.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517564|gb|EAS20221.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 663

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 14/289 (4%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
                   NP G   +  + G        + +     D ++    +            + 
Sbjct: 371 LDIFASSINPDGTLSLPINIGKPANTEDDDFAFIINDDTNMGYFSSNRPGGQGDDDIYRF 430

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            Q + L++    +     ++         +        +  +++ + K    ++  L   
Sbjct: 431 VQLEDLKDACEIILTGTVTDEKTGLPMNQATVMVMDANNNTVDQLVTKTNGKYVFKLECG 490

Query: 182 KILAMKRKKRLQDLAKKI--SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           K   ++ +K      + +  + T S  +   +              I+ +       FD 
Sbjct: 491 KQYFVRTQKENYSSDEDLFTTPTQSDFLDVPLAMVNKKIPIVDCDDIAPLLNIKDIYFDF 550

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                 P+  + L KI   +    +    IR HTD+         N  LS  RA S  + 
Sbjct: 551 DRFNIRPDAALELSKILAFMELYPQTSVEIRSHTDSR---APDAYNDVLSEKRAQSTRKW 607

Query: 299 LMKSGVSEDRISKISGFAHHRLKI--ASD-----PMNSANRRIDILVED 340
           L++ G+S  R++   G+   +L    ++        +  NRR + +V  
Sbjct: 608 LIEKGISASRLTA-KGYGERQLVNNCSNGVDCTPEEHQLNRRSEFIVTG 655


>gi|59711130|ref|YP_203906.1| outer membrane protein [Vibrio fischeri ES114]
 gi|59479231|gb|AAW85018.1| outer membrane protein [Vibrio fischeri ES114]
          Length = 219

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             +F+         +  +LQ + E L    + + + GHTD    +     N  L L R+ 
Sbjct: 111 RVLFNFDQYSLTERSKYILQSVTEKLETQKDTVLLNGHTDN---KGRENYNINLGLARSN 167

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S    L+  G S++++   S F   +    +  +     NRR+DI
Sbjct: 168 SVKAFLLAQGASKEQLESYS-FGEQQPIDDNTTLEGQHHNRRVDI 211


>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
 gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
          Length = 374

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 246 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 302

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361

Query: 338 VED 340
           V+ 
Sbjct: 362 VKG 364


>gi|315179972|gb|ADT86886.1| hypothetical outer membrane protein [Vibrio furnissii NCTC 11218]
          Length = 176

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 7/156 (4%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           +     +   LQD           +         +       ++ +   ++   +F   S
Sbjct: 2   EAPQANQIADLQDDDSDGVVNARDICPGTPSGAEIDNDGCGEVIRNSARRQLHILFANDS 61

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
               P     +Q + E L       I I+G+T           N  LS  RA +  + L+
Sbjct: 62  YEINPVFADQIQAMAEFLKTYQSASIEIQGYTSKV---GTNEYNQELSQKRAEAVERKLL 118

Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
             G+S  R+ +I GF   RL    D    ++ NRR+
Sbjct: 119 SYGISPKRV-RIIGFGETRLLDDGDTNSAHAVNRRV 153


>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
 gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
 gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
 gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
          Length = 346

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
 gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
          Length = 350

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
          Length = 350

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
 gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
 gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
 gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
 gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
 gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
 gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
          Length = 346

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|330820825|ref|YP_004349687.1| OmpA/MotB [Burkholderia gladioli BSR3]
 gi|327372820|gb|AEA64175.1| OmpA/MotB [Burkholderia gladioli BSR3]
          Length = 228

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             S      +++++      K +   L+G +A            R  ++   I      +
Sbjct: 43  EASSRLADEVRQRQVETQRRKTLEQALAGPLAAG----------RVTLVDGRIGIAGNVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289
           F  +S    PE   +L+     +   L    +++ + G  D    R       DNW LS 
Sbjct: 93  FAVNSDQLQPEGRDLLRSLAGPLTAYLHDRDQILMVSGFADDQLVRAGNRRFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           +RA +  +  + SGV    +   + F   +   ++  +   + NRR++I
Sbjct: 153 ERALTVTRAFIDSGVPAASVFAAA-FGSEQPVSSNADEAGRARNRRVEI 200


>gi|219685751|ref|ZP_03540562.1| flagellar motor apparatus [Borrelia garinii Far04]
 gi|219672690|gb|EED29718.1| flagellar motor apparatus [Borrelia garinii Far04]
          Length = 260

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      + NW LS  R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|219684669|ref|ZP_03539612.1| flagellar motor apparatus [Borrelia garinii PBr]
 gi|219672031|gb|EED29085.1| flagellar motor apparatus [Borrelia garinii PBr]
          Length = 260

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      + NW LS  R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RVKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
 gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
          Length = 356

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  D+IS   G             +    +A       +RR++I 
Sbjct: 285 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|193213735|ref|YP_001994934.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087212|gb|ACF12487.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 264

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  + +        +L ++ E L      + I GHTD+   +  +R N+ LS+ RA +  
Sbjct: 160 FPVNRTELPYSAHDMLDELAEKLLAKRLSVEIVGHTDS---KGSSRFNYNLSVQRAAAVK 216

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           + L++ GV    + +  G   +     +        NRRI++ V
Sbjct: 217 KYLIRRGVPASWL-RAYGVGSNEPITRNKTKEGREKNRRIEVKV 259


>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
 gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
 gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
 gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
 gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
 gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
          Length = 358

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|119357876|ref|YP_912520.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119355225|gb|ABL66096.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 337

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 8/127 (6%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           V  +     I  +         FD + S   P +   L +I +++       + + GHTD
Sbjct: 213 VSADQMTQAITSTGRVSLYGIYFDTNKSDIKPASSPALVEIAKLMKSQPALKLHVVGHTD 272

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSA 330
                     N  LS  RA +    L++  G++  R+   +G A+      +      + 
Sbjct: 273 NV---GGYEFNMGLSKRRADAVVASLVRNHGIAPARL-AANGVAYLAPVAPNTTEAGRAK 328

Query: 331 NRRIDIL 337
           NRR++++
Sbjct: 329 NRRVELV 335


>gi|307718829|ref|YP_003874361.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
 gi|306532554|gb|ADN02088.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
          Length = 414

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    ++ LP     L  + E L    +    + GHT         R    LS  RA + 
Sbjct: 311 FLPDQAVLLPGEEEKLDLLAEALNAIPDRTILVVGHTADV---GKPRGQMALSEARAKTI 367

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L+K GV  +R+  + G         +D       NRR++I V + 
Sbjct: 368 VEELVKRGVKPERLIYL-GKGGTEPVAPNDTEEGRRLNRRVEIFVLED 414


>gi|254489059|ref|ZP_05102263.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
           GAI101]
 gi|214042067|gb|EEB82706.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
           GAI101]
          Length = 478

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 9/149 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           ++      L  +              I + + +      F + +++   E+  ++ +I  
Sbjct: 333 QVDRVRDQLADEIAAGLTTVSEEGDFIAVRLGEALQ---FGEGAAVLASESP-IIARIAT 388

Query: 258 VLAHSTEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           VL +    I + GH+D  P     R   N  LS  RA +   VL +     DR+  + G 
Sbjct: 389 VLENEPGSIIVEGHSDNIPLSGRGRYKTNEELSAARAAAVSDVLAQYMSDPDRM-TVEGA 447

Query: 316 AHHRLKIASDPMNS--ANRRIDILVEDRQ 342
              +  + +D   +   NRR+DIL+   Q
Sbjct: 448 GASKPLVRADTPEARSRNRRVDILLLKEQ 476


>gi|124004728|ref|ZP_01689572.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123989851|gb|EAY29380.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 513

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     F   S     ++  +L  + + +    E  I + GHT           N RLS 
Sbjct: 397 EDGAFRFKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNI---GTKAGNLRLSK 453

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334
            RA +  + LM+  G+   RI    G+A +R  +   ++P    NRR+
Sbjct: 454 KRAEAVRKYLMEYDGIDPKRIKTA-GYADNRPLVPNVNEPNRKKNRRV 500


>gi|120554618|ref|YP_958969.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120324467|gb|ABM18782.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 189

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
              T  FD  +S   P+   VL      LA +  + + + GH D          N  L  
Sbjct: 82  DITTFYFDFDTSEIKPDARDVLVAHARYLADNPRQQVRLEGHADER---GTKEYNLALGE 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +  + L+ +G S  +I  +S +   +  +  +++   + NRR++++
Sbjct: 139 RRANAVQRFLIVNGASRGQIETVS-YGEEKPAVRGSTESAWAQNRRVELV 187


>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 369

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356

Query: 338 VED 340
           V+ 
Sbjct: 357 VKG 359


>gi|57505318|ref|ZP_00371247.1| omp18 [Campylobacter upsaliensis RM3195]
 gi|315639283|ref|ZP_07894445.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
           upsaliensis JV21]
 gi|57016454|gb|EAL53239.1| omp18 [Campylobacter upsaliensis RM3195]
 gi|315480609|gb|EFU71251.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
           upsaliensis JV21]
          Length = 165

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDN 284
            + D      FD        +   V+     +     S   I++ G+ D          N
Sbjct: 52  QLNDTLGKVYFDFDKFNIRSDMQSVVSTNANIFNTEVSGTSITVEGNCDEW---GTDEYN 108

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             L L RA +    L+  GV+ DRI  +  +              ++ NRR +  +  
Sbjct: 109 QALGLKRAKAVKDALISQGVNSDRI-SVKSYGETNPVCTEKTKTCDAQNRRAEFKLAR 165


>gi|220921336|ref|YP_002496637.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219945942|gb|ACL56334.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 178

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+ +S    P     L +  + L      +    + GHTDA         N  LS  RA 
Sbjct: 76  FEYNSDALTPAAKQNLDEFAKALQDARLRSASFVVEGHTDAR---GGEEFNLGLSTRRAD 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
           +  + L   GV + +++   GF   R     DP++ ANRR++
Sbjct: 133 AVVKYLSGRGVPQGQLTA-RGFGKSRPL-TDDPLDPANRRVE 172


>gi|158604954|gb|EAT98065.3| OmpA/MotB [Campylobacter concisus 13826]
          Length = 259

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 11/178 (6%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +    +          +    K +K  Q+        ++ L+  +    +  E +  G +
Sbjct: 64  ARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITMEESEDGFI 123

Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR--NI 280
           + +       +FDK S+     +  + L++IG ++A         I G+TD +     +I
Sbjct: 124 VRLPAAM---LFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNPSKDSI 180

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++NW+LS  RA S  + L+  GV ++R+   SG A      ++      + N R++I
Sbjct: 181 YKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNRVEI 237


>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
 gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
           35469]
          Length = 375

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 247 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 303

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362

Query: 338 VED 340
           V+ 
Sbjct: 363 VKG 365


>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 369

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356

Query: 338 VED 340
           V+ 
Sbjct: 357 VKG 359


>gi|311746921|ref|ZP_07720706.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
 gi|126578612|gb|EAZ82776.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
          Length = 562

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 58/306 (18%), Positives = 104/306 (33%), Gaps = 29/306 (9%)

Query: 37  YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           +AD MT            +         I Q F+     ++   K + D  N    + + 
Sbjct: 280 FADLMT-----------FSTKVPLE---IPQEFSTAPPAILPPKKALADVSNNKSSNEEV 325

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
            +         K+S+     S  Q +Q    +            E+    L  D +    
Sbjct: 326 TLAPI----YPKSSIGKPEVSMEQIQQMAEAKPVAEVTEAQTPEENPVEWLVLDGKNSTR 381

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
           L          N+         +   +            A      L+    + + K V+
Sbjct: 382 LDYEMKFFNGKNEVIFEDSSAYTLSFLKESNVNLIKVKSAGFFPKELTLKDINPLDKTVV 441

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274
             T      + +++  N   F + ++     ET  VL ++ E L+ ++ V   I GHTD 
Sbjct: 442 LMTKLESGSVLLLENVN---FKRGTAELEGEETEAVLSELAEFLSENSSVKLRINGHTD- 497

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
                    N  LSLDRA S    L+  GV+ + + +I+G+   R   ++      S NR
Sbjct: 498 --GGGDPSLNKGLSLDRARSVRDYLVDHGVTFENL-RIAGWGGTRPIASNATESGRSKNR 554

Query: 333 RIDILV 338
           R+++ V
Sbjct: 555 RVELEV 560


>gi|54309669|ref|YP_130689.1| outer membrane protein [Photobacterium profundum SS9]
 gi|46914107|emb|CAG20887.1| conserved hypothetical outer membrane protein [Photobacterium
           profundum SS9]
          Length = 220

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F   S    PE+  VL+ I   L +S + +S+ GHTD+         N+ L L RA 
Sbjct: 118 RVYFAFDSQRLTPESQTVLKAIARKLTNSQQTVSLAGHTDSV---GSQGYNYTLGLQRAK 174

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           S+ Q L+ + V +  +   + +   +   ++      + NRR+D++
Sbjct: 175 SSMQYLIDNEVKDTNLKSKT-YGETQPIESNTTSQGRAMNRRVDVV 219


>gi|126173146|ref|YP_001049295.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|125996351|gb|ABN60426.1| OmpA/MotB domain protein [Shewanella baltica OS155]
          Length = 485

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S   LPE+  VL+ +   L         +  HTD    +     N  LS  RA +
Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQHPTLSFYVVEHTDD---KGERSYNQSLSERRAAA 434

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + L     +   +++   G   +    ++        NRR+++++   +
Sbjct: 435 VIKQLSDGFQIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484


>gi|296282963|ref|ZP_06860961.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
          Length = 214

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L  +    +  L       GV  E       I ++   +   F  +S+   P     L  
Sbjct: 58  LGDQFDDQIRELDEQTAGSGVDVEEIGDQDAI-LVRLPDGVTFATNSANINPSFQRTLDT 116

Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + + +       I + G TD +        N +LS  RA +    L+  GVS  RI    
Sbjct: 117 VAQSMIRYPNSLIDVYGFTDTT---GSPSYNQQLSEQRAQAVANYLVSQGVSRARI-ATR 172

Query: 314 GFAHH----RLKIASDPMNSANRRIDILV 338
           G+       R++   +     NRR++I +
Sbjct: 173 GYGEDPQYLRVRTGDNVNEPLNRRVEIKI 201


>gi|285019182|ref|YP_003376893.1| pal family outer membrane lipoprotein [Xanthomonas albilineans GPE
           PC73]
 gi|283474400|emb|CBA16901.1| probable pal family outer membrane lipoprotein [Xanthomonas
           albilineans]
          Length = 172

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+TD          N  L  
Sbjct: 63  RQRVVYFDLDKDTVKPEFQAIMACHAKYLRDRPSSRITLQGNTDER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            RA S +  L  +G S  ++  +  F         +++   S NRR++I+
Sbjct: 120 RRANSVFSALQANGGSAAQL-TVVSFGEEHPVCTESNESCWSQNRRVEIV 168


>gi|322418514|ref|YP_004197737.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320124901|gb|ADW12461.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 450

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  SS    P     L     ++  + E  + I GHTD+       + N  LS  RA + 
Sbjct: 344 FLFSSPAVRPIYQAQLAAFAALMKANEESSALIEGHTDSV---GDRQSNLNLSQQRAQNV 400

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
              L+K GV+  ++  I G+   + + ++        NRR  + + 
Sbjct: 401 KNELLKHGVAPAKV-AIKGYGFSKPRASNKTNVGRQKNRRAVVTLT 445


>gi|254429703|ref|ZP_05043410.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196195872|gb|EDX90831.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 368

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F         +    ++ + + L       I + GH D++     A  N  LS  RA S 
Sbjct: 257 FGFDRDTIQGQFSDEIKGVADRLNAGEQGRIRVEGHADST---GPADYNQGLSERRAQSV 313

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              LMK   V  D+I+   GF   +    +      + NRR DI+VE  +
Sbjct: 314 KDRLMKDFSVGADKITT-EGFGESKPVADNSTADGRAKNRRADIIVETEE 362


>gi|220925333|ref|YP_002500635.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
           2060]
 gi|219949940|gb|ACL60332.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
           2060]
          Length = 172

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+   P     L K  + L+        I GH D          N+ L   R
Sbjct: 62  DRVFFETDSTDLTPTATATLDKQAQWLSRYPHYTFLIEGHADER---GTREYNFSLGARR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVED 340
           A +    L   G++  R+  +S +   R     +D    S NRR   +++ 
Sbjct: 119 AQTVRDYLASRGIAGSRMRTVS-YGKERPVAVCNDISCWSQNRRAVTVLDG 168


>gi|71066157|ref|YP_264884.1| outer membrane protein OprF [Psychrobacter arcticus 273-4]
 gi|71039142|gb|AAZ19450.1| outer membrane protein OprF, OmpA/OmpF family [Psychrobacter
           arcticus 273-4]
          Length = 240

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
           +   +FD  ++    +   VL+ +   +    ++ +++ GHTD    +     + +LS  
Sbjct: 129 QFNVLFDFDNAGIKSKHSAVLRGMTNFIQAYPQIAVTLEGHTDN---KGPESYHLKLSES 185

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           R      +L+ K GV   R+S + G+       +++       NRR+  +V  R 
Sbjct: 186 RVNMVKNILVDKYGVDAMRLSTV-GYGETMPVDSNNTEKGRQNNRRVVAIVSQRN 239


>gi|327334842|gb|EGE76553.1| putative outer membrane protein A [Propionibacterium acnes
           HL097PA1]
          Length = 368

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVASNDSEAGRRLNRRVTITVKE 367


>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 358

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|99080684|ref|YP_612838.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99036964|gb|ABF63576.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 1619

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F    +      + VL++  + L        V  I GHTD++      + N  LS  RA 
Sbjct: 467 FATGKADIREAGLGVLREAADALKARGAENYVFLIEGHTDST---GSDKINLPLSDARAK 523

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  +  +++ G++ +R+  + G+        +        NRR++I
Sbjct: 524 SVERYFVENAGIAPERLQTV-GYGPRIPLATNATEGGKQINRRVEI 568


>gi|323495647|ref|ZP_08100718.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
 gi|323319282|gb|EGA72222.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
          Length = 211

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F+   S    ++  VL ++  ++      I + GHTD       A  N+ L L R+ 
Sbjct: 108 RVYFNFDDSTLTQQSEYVLTRVMRLIESQARNIELAGHTDNV---GDAGYNFSLGLRRSK 164

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           +    L++ GV   RI+  S F  ++  + +  D     NRR+++
Sbjct: 165 AVEDYLVERGVDTKRITTTS-FGENKPFVDNMSDENRKLNRRVEV 208


>gi|134094293|ref|YP_001099368.1| putative outer membrane protein; putative peptidoglycan-associated
           (lipo)-protein [Herminiimonas arsenicoxydans]
 gi|133738196|emb|CAL61241.1| conserved hypothetical protein; putative OmpA domain [Herminiimonas
           arsenicoxydans]
          Length = 225

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F    S        +L +    L  +    ++I GHTD++        N  LS
Sbjct: 103 DIPSDISFATGRSDINSSFRPILDRFATGLVDNPAATVTIIGHTDST---GSDAINNPLS 159

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
            DRA      L   GV+  RI  + G        +  ++   + NRR++I V
Sbjct: 160 FDRASRTRDYLAGRGVAPQRIH-VDGRGSREPVASNANEAGRARNRRVEIYV 210


>gi|326336319|ref|ZP_08202490.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691493|gb|EGD33461.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 666

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           DSE+ + + K+ D   + +  ++      +   + A K    + +    I          
Sbjct: 473 DSEQKEIIHKTNDTNGNFDFGKSQVNCDDTFVFVRAQKENYAVVEEQINIREKGEIHKEI 532

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-I 268
            +       T    +            FD   S    +  V L KI EV+     +   I
Sbjct: 533 FLKSIKKNVTVGDDLAKFFG--IEIIYFDFDKSNIRSDAEVDLAKIVEVMKEHPNIKIAI 590

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASD- 325
           + HTD+       + N  LS  RA S  + ++K G++  R++   G+   +L    ++D 
Sbjct: 591 KSHTDSR---GSDQYNLALSDRRAKSTLEWIVKQGITRSRLTA-KGYGETQLVNGCSNDV 646

Query: 326 ----PMNSANRRIDILVED 340
                 +  NRR + ++ +
Sbjct: 647 PCTEEEHQKNRRSEFIITE 665


>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
 gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
 gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
 gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
 gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
 gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
 gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
 gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
          Length = 358

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
 gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
          Length = 358

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
          Length = 369

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 241 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 297

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 298 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 356

Query: 338 VED 340
           V+ 
Sbjct: 357 VKG 359


>gi|254446248|ref|ZP_05059724.1| hypothetical protein VDG1235_4498 [Verrucomicrobiae bacterium
           DG1235]
 gi|198260556|gb|EDY84864.1| hypothetical protein VDG1235_4498 [Verrucomicrobiae bacterium
           DG1235]
          Length = 260

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 1/189 (0%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +       ++        E          +    +   K L ++A++    L+   A+ 
Sbjct: 48  QDPYNTPMDNSMGVIESPTEGQPSSANGQAKGKAEISDFKVLYEMAQEFMRLLNIDSANP 107

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
             K V  + T  G+ +++ D+   P F ++S+   P    V++ +  ++     ++ + G
Sbjct: 108 DQKPVDLDVTSDGLRVTLYDRDAHPFFVENSADYTPWGSFVIETLAWLVQRHNFMVRVDG 167

Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           +              W LS DRA S  ++L + GV   +   ++   +        P   
Sbjct: 168 YVSEGFEGDGWEYTAWELSSDRANSTRRLLERYGVRRGQFKSVTSHGNMEPLPFMHPTAE 227

Query: 330 ANRRIDILV 338
           AN R+ I +
Sbjct: 228 ANDRVSISL 236



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
           ++ G+WK+ YADF+T +MA F+V+W+ +  D+  K+ + +YF       M  S G+ +  
Sbjct: 7   HHGGAWKVAYADFVTAMMALFMVLWLTSQ-DESLKRDLAKYFQDPYNTPMDNSMGVIESP 65

Query: 88  NPPERSSQNKIDLSIDE 104
              + SS N       E
Sbjct: 66  TEGQPSSANGQAKGKAE 82


>gi|225552270|ref|ZP_03773210.1| flagellar motor apparatus [Borrelia sp. SV1]
 gi|225371268|gb|EEH00698.1| flagellar motor apparatus [Borrelia sp. SV1]
          Length = 260

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 20/164 (12%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAAD---AFFDSASADVKLEENRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +      L+       I GHTD   +      + NW LS+ R+ +        L +S
Sbjct: 148 IQKIASFIGFLSPRGYNFKIEGHTDNIDTDINGPWKSNWELSVARSVNMLEHILNYLDQS 207

Query: 303 GVSEDRI---SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   RI    ++SGF   R     D       NRRIDIL+   
Sbjct: 208 DV--KRIENSFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|120612058|ref|YP_971736.1| OmpA domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120590522|gb|ABM33962.1| OmpA domain protein [Acidovorax citrulli AAC00-1]
          Length = 181

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               FD  S +  PE   ++++    +  S      I GHTD          N  L   R
Sbjct: 76  RIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDR---GGREYNLALGQKR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           A +  + L   GV E ++  +S F   +  +  +  ++   NRR+++
Sbjct: 133 AEAVRRALGLLGVPEAQMEAVS-FGKEKPAVQGNTEDAFSQNRRVEL 178


>gi|262403880|ref|ZP_06080438.1| outer membrane protein [Vibrio sp. RC586]
 gi|262350384|gb|EEY99519.1| outer membrane protein [Vibrio sp. RC586]
          Length = 337

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275
               +  + +++        FD S  I        + ++ + L  + E+   + GHTD+ 
Sbjct: 217 TYEPQKLLAVTLDSSDIHFDFDSSEIILTRSLSKKISQVIKFLFDNPEIKIEVIGHTDSV 276

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333
                   N  LS  RA S  Q+++  GVS +RI+ I G         +      + NRR
Sbjct: 277 ---GSQEYNLVLSKQRATSIAQLIIDGGVSINRIN-IIGKGEDEPITTNSHAMGRAQNRR 332

Query: 334 IDI 336
           ++I
Sbjct: 333 VEI 335


>gi|332524171|ref|ZP_08400398.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
           JA2]
 gi|332107507|gb|EGJ08731.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
           JA2]
          Length = 178

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288
           D     +F+  +    P  I  L ++G  LA +    + + GHTD       A  N  LS
Sbjct: 68  DLSMALLFEFDADRLAPLQIERLGRLGRELAEAGIHRMHVEGHTDNV---GAASYNQALS 124

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           L RA S  + L  +G     + ++ G    R      ++   + NRR+ ++V   
Sbjct: 125 LRRAASVARALSGAGFDAAGL-QVRGLGAARPIADNTNEAGRARNRRVTLIVVAD 178


>gi|156976121|ref|YP_001447027.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
 gi|156527715|gb|ABU72800.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
          Length = 321

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + I G++D +        N +L+  RA +  +     G++ DR+  + G        ++
Sbjct: 238 QVEINGYSDTT---GSEAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASN 293

Query: 325 DPMNSA--NRRIDILV 338
           +       NRR++++V
Sbjct: 294 ETREGREENRRVEVVV 309


>gi|308047841|ref|YP_003911407.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307630031|gb|ADN74333.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 716

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 12/109 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           FD  S+         L ++   LA   +      I GHTD+         N  LS  RA 
Sbjct: 53  FDTDSATLSQADQQALTQLAAKLAPMLDGQMALAISGHTDS---AGAEEYNLGLSQRRAQ 109

Query: 294 SAYQVLMKSGVSEDRISKISG--FAHHRLKIASDPMN--SANRRIDILV 338
           S  Q L    +  ++  +I    F   +   ++D     +ANRR++I +
Sbjct: 110 SVAQFLTS--LMPEQHIRIESRYFGETQPLQSNDSARGMAANRRVEITL 156


>gi|253702173|ref|YP_003023362.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
 gi|251777023|gb|ACT19604.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
          Length = 200

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 7/175 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +  EE       +  +  A + +      A +   T +    +  V     +   TG   
Sbjct: 28  VRTEEPISAAQSAPTQAPATQARPEADSGAAQQPITETTPSREQAVTQETAKEAGTGATQ 87

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
            +  +     F+  ++    E    L K  E L+    +   I G+ D          N 
Sbjct: 88  EVQAELQKVYFNFDAADLSEEARGSLSKNAEYLSRQAGIKVRIEGNCDER---GSDDYNM 144

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
            L   RA +A   L+  G++ DR+S IS +   +       +   + NRR + ++
Sbjct: 145 ALGERRAKAARDYLVNLGIASDRLSTIS-YGEEKPADPGHDEAAWAKNRRAEFVI 198


>gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Dublin]
          Length = 229

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 101 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 157

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 158 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 216

Query: 338 VED 340
           V+ 
Sbjct: 217 VKG 219


>gi|297620366|ref|YP_003708503.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
           WSU 86-1044]
 gi|297375667|gb|ADI37497.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
           WSU 86-1044]
          Length = 248

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 6/166 (3%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           L   +       +     +         +   ++  +     F   R  + +  + Q   
Sbjct: 82  LEFEAFPDQDYGRDVALAEPRYHPQKQRIEPGMSKQLPGIEDFTDPRYDVELRTVFQTVY 141

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             ++            +      +  H    + + GH D          N  L   R+ S
Sbjct: 142 FPYNSGLIKGKGNMDRLRTIAAYMQKHPDTYLFVEGHCDER---GAEAYNLALGAKRSNS 198

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
             ++L+K GV  +RI  +S +   R   +  ++   S NRR +  +
Sbjct: 199 VRELLIKEGVRPERIFTVS-YGKERPADSGHNEESWSKNRRAEFKI 243


>gi|298291600|ref|YP_003693539.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
 gi|296928111|gb|ADH88920.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
          Length = 336

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE+   + ++  +L  + +  + I GHTD          N  LS  RA + 
Sbjct: 229 FDFDKADIKPESEAQIAQLASLLKSNPQLGVLIVGHTD---GHGAFDYNLSLSQRRAQAV 285

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L    G++ +R +  +G        ++      + NRR++I+
Sbjct: 286 ANRLTSQHGIAANR-TTPAGAGMIAPVASNRTEEGRAKNRRVEIV 329


>gi|257454195|ref|ZP_05619465.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
           SK60]
 gi|257448368|gb|EEV23341.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
           SK60]
          Length = 172

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
             T  T ++ +     NT  F   SS    +   VL +  + L  +    ++I GHTD  
Sbjct: 52  VVTNSTSVITAAGANPNTVYFGFDSSEIDAQGQAVLNQQAQFLQANPSARVAIAGHTDER 111

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
                   N  L   RA +A   L  SGVS  R+  IS +   +       +   + NRR
Sbjct: 112 ---GSREYNLALGERRAQAAQAYLATSGVSASRMEAIS-YGEDQPADPGHDESAWAKNRR 167

Query: 334 IDI 336
            +I
Sbjct: 168 AEI 170


>gi|152966787|ref|YP_001362571.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
 gi|151361304|gb|ABS04307.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
          Length = 471

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 11/236 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           T     L  G +            +     +  +     ++        +     D E  
Sbjct: 154 TAGDGVLTEGYSGLGGVRPGETVRLQAAYAAPPAGTPDVAVLLPGTGLVEALAVVDGELP 213

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
               +             A      L  D A   +     + A+++   V  ET+  G  
Sbjct: 214 GPTPDLTPDASTGTGTGTAEDGPAPLDPDGAATAAVRPLEVYAEDLQGTVRTETSDAGAR 273

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDN 284
           +++       +F   S+   PE   VL+    +VL      +++ GHTD          N
Sbjct: 274 VALAAD---VLFALDSAELSPEARAVLETAATDVLTRRPGPVAVVGHTDDQ---GADDYN 327

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
             LS  RA +   VL    +  D   ++ G       +   S    + NRR++++V
Sbjct: 328 LDLSRRRAQAVADVL-GPLLGADYPLQVDGRGEAEPAVPGPSTEARARNRRVELVV 382


>gi|330993342|ref|ZP_08317277.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
 gi|329759372|gb|EGG75881.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
          Length = 364

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   +     +  ++ +  +   H     I + G+TD +   P     + N  LS+ 
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 314

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV  + I  I G+      + +  D     NRR++I++
Sbjct: 315 RAESVKAELIRDGVPANAID-IHGYGEAHPLVPTGPDTREPQNRRVEIIL 363


>gi|294676060|ref|YP_003576675.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294474880|gb|ADE84268.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 223

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 4/106 (3%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
            D  NT  F  +S          L +    +    E    + GHTD          N  L
Sbjct: 64  QDVPNTVNFAFNSDRLDGTAQAALAQQANWIKQFPEVKFRVYGHTD---LVGSDAYNKAL 120

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            L RA +    L   G+S  R+  +  +   +  +     N+ NRR
Sbjct: 121 GLRRARAVVAFLTGQGISRSRLEAVVSYGKTQPLVYDPGPNAQNRR 166


>gi|316932667|ref|YP_004107649.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
           DX-1]
 gi|315600381|gb|ADU42916.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
           DX-1]
          Length = 165

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   S   P+    L K  + L        +I GH D          N  L   R
Sbjct: 57  DRVFFESDQSDLSPQAAATLDKQVQWLQTYARYTFTIEGHADER---GTREYNIALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L+  G+   R+  IS +   R     +D    S NRR
Sbjct: 114 AQSVRNYLVSRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRR 156


>gi|300778373|ref|ZP_07088231.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
 gi|300503883|gb|EFK35023.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
          Length = 909

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  SS   P   + L  + E+L       I + G+TD          N  LS  RA +A
Sbjct: 805 FETGSSDLKPGYELQLNTLAEILNAYPNLKIKLGGYTDN---SGNEESNLSLSNLRAQTA 861

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILVED 340
              L++ GVS DRI    G+        A+D     + NRRID+ V  
Sbjct: 862 KLKLLELGVSADRIEA-EGYGSQHPVCEANDTDECKAKNRRIDVRVLA 908


>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 358

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|56697920|ref|YP_168291.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
 gi|56679657|gb|AAV96323.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
          Length = 211

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        VL    + +    E    + GHTDA         N  L + RA + 
Sbjct: 68  FAFDSAELDATAQQVLTLQADWIRQFPEVRFRVYGHTDAVGSSG---YNKSLGMRRARAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
                  G+S  R+  +  +   +  + +      NRR
Sbjct: 125 VSFFASRGISRSRLEAVVSYGETQPLVPTGERERRNRR 162


>gi|254441790|ref|ZP_05055283.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
           antarcticus 307]
 gi|198251868|gb|EDY76183.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
           antarcticus 307]
          Length = 172

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  MF   +S    E    L      L+ +++ +++  GH D          N  L   R
Sbjct: 62  DRVMFAVDTSTLTAEGRNTLDGQSGWLSTNSDYLAVIEGHADEQ---GTREYNLALGARR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  G++  RI  +S +   R     + +   + NRR
Sbjct: 119 ANAVREYLISKGLASSRIRTVS-YGKERPIAVCSEESCYAQNRR 161


>gi|325102858|ref|YP_004272512.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324971706|gb|ADY50690.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 141

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     +D       P+  V L K+ ++L  +    I +  HTD+         N  LS 
Sbjct: 27  RIENIYYDFDKWNIRPDAAVELDKLVKILKDNPTIWIELGSHTDSR---GKDAYNLNLSQ 83

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILV 338
            RA SA   ++  G+ ++RI    G+   +L    ++     +  +  NRR +  +
Sbjct: 84  KRAESAVGYIVSRGIDKNRI-AARGYGETQLLNRCSNGVECTEEEHQLNRRTEFKI 138


>gi|291286065|ref|YP_003502881.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883225|gb|ADD66925.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 666

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
             +  +F  +SS    ++  V+  I   L         I GHTD+      A  N +LS 
Sbjct: 553 NFSNILFKLNSSKLTKDSYPVVDAIAAKLKTMEGYTLQIVGHTDS---SGNAEFNKKLSA 609

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +RA S Y  L++ GV ++ I+   G        ++   +    NRRI+  + 
Sbjct: 610 ERAKSVYNRLVRKGVPKENITTY-GKGEELPLYSNATRDGRVKNRRIEFKLT 660


>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 358

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 371

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 243 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 299

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 300 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 358

Query: 338 VED 340
           V+ 
Sbjct: 359 VKG 361


>gi|120555939|ref|YP_960290.1| hypothetical protein Maqu_3029 [Marinobacter aquaeolei VT8]
 gi|120325788|gb|ABM20103.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 217

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 19/168 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS+     +++++  +     +   L   +   +            I IS        +
Sbjct: 42  ELSQSLAEEIEKREAEEQRRMALEQALEDPLTKGL-----VTFRDGRIGIS-----GNVL 91

Query: 237 FDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLD 290
           F+ +S     E   VL    + +   L    E++ + G TD  P    N  +DNW LS  
Sbjct: 92  FELNSDQLQAEGEEVLESLIRPLQAYLEQHDELLMVSGFTDDLPMHPGNRYQDNWGLSAQ 151

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           RA +  + L + G+  DR+   + F  H   + +      + NRR++I
Sbjct: 152 RALTVTRTLTELGLPNDRVFAAA-FGPHHPAVPNVDAESRAQNRRVEI 198


>gi|325068010|ref|ZP_08126683.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 411

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 11/177 (6%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E+      + +   A      L +     S+ +       +       T    I +++  
Sbjct: 55  ESGSAQQANIDLSAAQTELDTLPNTTLAASAPIERYTRS-LDDSTSTHTGGKDITVTLAS 113

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLS 288
                 F   S+         LQ +   L        ++I GHTD          N  LS
Sbjct: 114 DVT---FASDSADLASGAETQLQTVVGQLGQYPDGGTLTIVGHTDDVQ---DDAYNQTLS 167

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             RA +    L +    +   + +SG    + K    +D   +ANRR++I +    G
Sbjct: 168 EKRANAVKTRLEQLTKLDKWQTSVSGKGESQPKINDTTDQARAANRRVEITLTPTSG 224


>gi|269105139|ref|ZP_06157833.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268160589|gb|EEZ39088.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 210

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 6/150 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + +  D+       L  ++         FE   +   I   D      F+  +S     +
Sbjct: 62  QIQQYDIVDVDKELLKNILGKMNSGEKCFEYLLSNASIERDDTTARVYFNFDNSKLTSAS 121

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           I +L K+ E +  S     I GHTD+         N  L   RA S  +  + +GV+  +
Sbjct: 122 IYILNKLIENVKASKSNYLIEGHTDSV---GTTSYNKDLGYRRAKSVIEFFVGNGVNRSQ 178

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +  IS     +    +D     S NRR++I
Sbjct: 179 LQGIS-EGELKPLETNDTSIGRSYNRRVEI 207


>gi|172062069|ref|YP_001809721.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171994586|gb|ACB65505.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 555

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 72/267 (26%), Gaps = 7/267 (2%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
           A  G+      P         +      +       +  +   ++   L +++   S   
Sbjct: 288 ARTGLQPRVTKPVAGPLPLPRIHASAPGSAGPAKRHLLPSPVNRREWPLASHVLLSSVVA 347

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +     S   +    + +        +             +    A     R       
Sbjct: 348 TTVAVAISGAVNYRIVERISDDLSAYWNTPAVRITASIDSFERLRAARDEVARNLRDGAP 407

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV-LQKIGE 257
             +         ++  V    T     ++ +   +  +F    +   P      L  +  
Sbjct: 408 FGAGWGLYPGRALLPRVDVALTAYQPPLTTVQIDSLSLFASGKATFSPAHERRELAHVLR 467

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           ++  + +    I GH D+      A  N RLS  RA +    L+  G        I G  
Sbjct: 468 LIRENPDQRVLIEGHADSE---GSADANLRLSEARARAIRDWLVAEGGLSVARFAIQGMG 524

Query: 317 HHRLKIAS--DPMNSANRRIDILVEDR 341
             R    +  +   + NRR+D+ +   
Sbjct: 525 DIRPIADNRSEAGRALNRRVDVSLIPD 551


>gi|332528331|ref|ZP_08404331.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
 gi|332042202|gb|EGI78528.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
          Length = 186

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +  PE   +++     L+      + I GHTD          N  L   RA 
Sbjct: 83  VYFDYDSYVIKPEFQKLIEAQARYLSSDPALRVVIEGHTDER---GGREYNLALGQRRAE 139

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           +  + L   GV++ +I  +S F   +     +++   S NRR +I
Sbjct: 140 AVRRALSLLGVADTQIDAVS-FGEEKPVSEGSNESAWSQNRRAEI 183


>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
 gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
          Length = 370

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 242 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 298

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357

Query: 338 VED 340
           V+ 
Sbjct: 358 VKG 360


>gi|307726202|ref|YP_003909415.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1003]
 gi|307586727|gb|ADN60124.1| type IV / VI secretion system protein, DotU family [Burkholderia
           sp. CCGE1003]
          Length = 445

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            +F    +   P+ I +L+++   L      + + GHTD  P  +   +DN+ LS  RA 
Sbjct: 335 ALFPSGGADLAPDEIPLLRRVASALNQVRGRVIVVGHTDDQPVHSLRFKDNFALSTARAQ 394

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI-ASD--PMNSANRRIDIL 337
           +   VL   G+ + R  + +G    +     +D     + NRR++IL
Sbjct: 395 NTLAVL-AQGLDDPRRLEANGAGSSQPVATPADLPANRARNRRVEIL 440


>gi|326316639|ref|YP_004234311.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373475|gb|ADX45744.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 181

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               FD  S +  PE   ++++    +  S      I GHTD          N  L   R
Sbjct: 76  RIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDR---GGREYNLALGQKR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           A +  + L   GV + ++  +S F   +  +  +  ++   NRR+++
Sbjct: 133 AEAVRRALGLLGVPDGQMEAVS-FGKEKPAVQGNTEDAFSQNRRVEL 178


>gi|193212309|ref|YP_001998262.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
           8327]
 gi|193085786|gb|ACF11062.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
           8327]
          Length = 169

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  SS    E    L++    +  +     +I+GH D          N  L   R
Sbjct: 64  GDIFFDFDSSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDER---GTDEYNLALGERR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
           A +A + L+ +GVS  R++ +S F          ++   + NRR
Sbjct: 121 ATAAKEYLITAGVSAGRLTAVS-FGEEMPFDPGHNEEAWAKNRR 163


>gi|220918872|ref|YP_002494176.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956726|gb|ACL67110.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 386

 Score = 86.6 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 70/272 (25%), Gaps = 16/272 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +    + G    Q  P+       D            +       +      + + 
Sbjct: 125 PDLDDRCPDAPGPSTLQGCPDADGDGIGDAEDACPAEAGPAETLGCPPAKDSDGDGVPDE 184

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I       +            +   D     D   +   ++                   
Sbjct: 185 IDRCPLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHDQGPLENRGCPVMDADGDGVA 244

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
              D            VA +               I++ +         +    LP + V
Sbjct: 245 DPDDRCP-----EQAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAV 295

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L ++ + L       +++  HTD       A  + RLS  RA +    L   G+  +R+
Sbjct: 296 LLDELAQALRDRPRLRVAVEVHTD---GAGEAAASKRLSQARAEAVRAALAGRGIEAERV 352

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339
               GF       ++      + NRR +I + 
Sbjct: 353 EA-KGFGAEHPIASNKTARGRAQNRRTEIRIL 383


>gi|308048148|ref|YP_003911714.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307630338|gb|ADN74640.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 219

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +    + L       GV  +     I + +    N+  FD  S       I  L  + 
Sbjct: 78  HYMDRQEAALREKLAGTGVSVKRDGDHIQLVM---PNSLTFDVGSDRLKMPAINALSGVA 134

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V++   E    I GHTD++        N RLS +RA +    L++  +S  R+S   G 
Sbjct: 135 MVVSEFDETNLQITGHTDST---GGRDLNMRLSRERAEAVASELLRQSISATRMSTY-GA 190

Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341
              R   ++      + NRR++I++  R
Sbjct: 191 GPDRPIASNQSEAGRAENRRVEIVLTPR 218


>gi|298485733|ref|ZP_07003812.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159759|gb|EFI00801.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 229

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L A     GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L    V +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQVVDQSHL-SVRGAGPD 199

Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343
           +   ++      + NRR+++ ++   G
Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226


>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 369

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 241 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356

Query: 338 VED 340
           V+ 
Sbjct: 357 VKG 359


>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
          Length = 354

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|58039713|ref|YP_191677.1| Outer membrane protein [Gluconobacter oxydans 621H]
 gi|58002127|gb|AAW61021.1| Outer membrane protein [Gluconobacter oxydans 621H]
          Length = 370

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD  S+        V+              I + G+TD S   P       N  LS  
Sbjct: 261 VFFDWDSAELSTRAKAVVAAAARNSTSVQVTHIEVSGYTDTSAAHPGHRGEAYNMALSQR 320

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +  + L++ GV+   +    GF      +  A++     NRR++I
Sbjct: 321 RANTVKEELVRDGVAAG-LITTQGFGESHPLVVTAANTREPQNRRVEI 367


>gi|170693231|ref|ZP_02884391.1| type IV / VI secretion system protein, DotU family [Burkholderia
           graminis C4D1M]
 gi|170141761|gb|EDT09929.1| type IV / VI secretion system protein, DotU family [Burkholderia
           graminis C4D1M]
          Length = 446

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293
            +F    +  LP+ I +L+++   L      + + GHTD  P  +   +DN+ LS  RA 
Sbjct: 336 ALFPSGGADLLPDEIPLLRRVASALNQVRGRVIVVGHTDDQPVHSLRFKDNFALSTARAQ 395

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI-ASD--PMNSANRRIDIL 337
           +   VL   G+ + R  + +G    +     +D     + NRR++IL
Sbjct: 396 NTLAVL-AQGLDDPRRLEANGAGSSQPIATPADLPANRARNRRVEIL 441


>gi|94501021|ref|ZP_01307545.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
           RED65]
 gi|94426768|gb|EAT11752.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
           RED65]
          Length = 180

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 7/140 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
             + +  V ++    V  +        + +  +    F    S   PE   VL    E L
Sbjct: 40  QQSETQAVPESPNVDVNTDAQAEAAQNNPLLDQTVVYFGFDRSELRPEFKDVLNAHAEYL 99

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             + +   ++ GH D          N  L   RA +  + L+  GV+  ++  +S +   
Sbjct: 100 VANPQASLTVEGHCDER---GTVEYNLALGERRAETVKRYLIVQGVAPSQLETVS-YGEE 155

Query: 319 RLKI--ASDPMNSANRRIDI 336
           R  +  + +   S NRR ++
Sbjct: 156 RPAVMGSDESAWSKNRRAEL 175


>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
 gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
          Length = 354

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|54307294|ref|YP_128314.1| putative OmpA family protein [Photobacterium profundum SS9]
 gi|46911714|emb|CAG18512.1| Putative OmpA family protein [Photobacterium profundum SS9]
          Length = 241

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    S      +  L+ +  
Sbjct: 101 YMDVQETKLRQQLESTGISVTRDGDNIVLNM---PNEITFGFDQSDLSSRAVAALKNVAL 157

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +  I++ G TD++     A  N RLS  RA      LM+ GV+ +R+    G  
Sbjct: 158 VAKEYDKTLINVYGFTDST---GSASYNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMG 213

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
                 ++      + NRR++I++
Sbjct: 214 EANPIASNKTEQGRAENRRVEIVL 237


>gi|84688003|ref|ZP_01015866.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84663984|gb|EAQ10485.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
          Length = 142

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           Q    +F   S     +    L++     +      ++ GHTD+         N RLS +
Sbjct: 35  QNTDVLFKTDSYQLTAQGQQWLRQFFA--SAGAFAYAVYGHTDSR---ASDEYNMRLSQN 89

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +   V  +SG   DR   + GF   R    ++       NRR++I+
Sbjct: 90  RANTVAGVARQSGAVVDR---VVGFGERRPIAPNNSAANMQKNRRVEIV 135


>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
 gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
 gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
 gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
 gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
          Length = 358

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
 gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
          Length = 364

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G+TD          N +LS
Sbjct: 236 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 292

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 293 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 351

Query: 338 VED 340
           V+ 
Sbjct: 352 VKG 354


>gi|260751226|gb|ACX48919.1| cellulase [Streptomyces sp. GS11]
 gi|307574878|gb|ADN52664.1| cellulase [uncultured bacterium]
          Length = 340

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 11/140 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             +V +  V+ V+     T I+  +       T  FD  S+     +   L    +++  
Sbjct: 197 EPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDASN--LSGTVDLMNT 254

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  + I G++D +     A  N +L+  RA +        G++ +R+  + G      
Sbjct: 255 YPQAQVEITGYSDTT---GSAAYNKQLTEKRAKAVADEFQAKGIAAERM-TVKGMGEANP 310

Query: 321 KIASDP--MNSANRRIDILV 338
             +++       NRR++++V
Sbjct: 311 VASNETRQGRQMNRRVEVVV 330


>gi|254292855|ref|YP_003058878.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
 gi|254041386|gb|ACT58181.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
          Length = 222

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 10/146 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + +      L       GV        I + +        F    +    +   VLQ +G
Sbjct: 80  RYMDQQEKKLRERLDETGVGVTRVGDTIQLVMPGDIT---FATGRAEINNQFDYVLQDVG 136

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL      V+ I GHTD        + N  LS  RA +    LM+ G+   R+  ++G+
Sbjct: 137 LVLQEFDKTVVFIDGHTDTV---GSYQKNDELSQARANNVAARLMQEGILGGRLV-VTGY 192

Query: 316 AHHRLKIASDPM--NSANRRIDILVE 339
              RLK+ +        NRR++I +E
Sbjct: 193 GESRLKVPTGDGVNEPLNRRVEIRLE 218


>gi|83593142|ref|YP_426894.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83576056|gb|ABC22607.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 229

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 19/174 (10%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +E I + +  K +++L ++    +  L  ++    V     + G++I      ++  ++ 
Sbjct: 59  QESIGSREVTKPIEELRQQTGDVIKSLQVED---VVGLGQDQQGLVIEF---ASSAFYEP 112

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIAR-DNWRLSLDRAYSA 295
            S+   P  I VL+++   L           I+GHTD  P        NW LS  RA   
Sbjct: 113 GSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRV 172

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILVEDR 341
            + ++  GV+++R+  I+ +A    K+ +              NRRI + V  R
Sbjct: 173 LRFMLDQGVAKERVLAIA-YADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPR 225



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/219 (9%), Positives = 66/219 (30%), Gaps = 16/219 (7%)

Query: 22  AIDDTPNNLG--SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
              D P +    +W I +AD   +L+ FF ++  I++ D    + ++        +    
Sbjct: 9   RHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVT 68

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL--------KIGSTNQKKQYQRLENNI 131
                  Q   +     +++  +     +  + +        + GS + +     +   +
Sbjct: 69  KPIEELRQQTGDVIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQV 128

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF------LPPLSKEKILA 185
               N  + +  +  +   ++              ++               ++KE++LA
Sbjct: 129 IATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRVLRFMLDQGVAKERVLA 188

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +        +  +     +  +   + + +        I
Sbjct: 189 IAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAI 227


>gi|332879955|ref|ZP_08447639.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681951|gb|EGJ54864.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 650

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 28/283 (9%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G   +     R   +  D       +   V     +    K    + +          
Sbjct: 372 ENGTVSKPINIGRPGNSADDDFCFVMDSDTKVGFLSSNRPGGKGRDDIYSFYEEKPLVFD 431

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            E     + +DSEK   +     +      +E       +         K   +DL   +
Sbjct: 432 CEKMIKGVLKDSEKNDVIADGVIVLSDKTMKEVARQKTKADGSFAF--EKVDCKDLYYYL 489

Query: 200 SSTLSGLVADNIVKGVLFETTRTGI------LISIIDQRN--------TPMFDKSSSIPL 245
            + +   V   +   +  E             I+I    +           FD   S   
Sbjct: 490 RAEIGDYVTTEVKVDLSVEGDVFYEFMIKPREIAIDKDVDLAKVLNIKEIYFDLDKSDIR 549

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P+  V L KI EV+  + ++   IR HTD+         N +LS  RA +  + ++K G+
Sbjct: 550 PDAAVELAKIVEVMRENPKMKIDIRSHTDSR---GADSYNLKLSDRRAKATLEWIVKQGI 606

Query: 305 SEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
              R++   G+   +L          +D  + ANRR + ++  
Sbjct: 607 ERKRLTA-KGYGETQLVNGCSNGVPCTDEEHQANRRSEFIIVS 648


>gi|262373433|ref|ZP_06066711.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
 gi|262311186|gb|EEY92272.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
          Length = 159

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + S   PE    + ++ + L     + + I GHTD          N +LS +
Sbjct: 52  PERLLFDFNKSDIKPENGKEIIRLAKQLNKYDLQKLKIVGHTDDI---GNPEYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S   + +  G  +  ++ + G   ++  + +  D   ++NRR+ I++
Sbjct: 109 RAQSVAGIFLNEGFKQTNLN-VIGRGSNQPFVPNTSDENRASNRRVAIII 157


>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
           fergusonii B253]
 gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
          Length = 359

 Score = 86.6 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 231 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 287

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 288 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 346

Query: 338 VED 340
           V+ 
Sbjct: 347 VKG 349


>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 358

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|254249294|ref|ZP_04942614.1| Outer membrane protein [Burkholderia cenocepacia PC184]
 gi|124875795|gb|EAY65785.1| Outer membrane protein [Burkholderia cenocepacia PC184]
          Length = 263

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    +    L +            ++I G TD++     A  N  LS  RA + 
Sbjct: 160 FATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDST---GSAAHNRTLSEARARTV 216

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              L  +G+   R     G        ++      + NRR++I ++ +
Sbjct: 217 VNYLRSNGLQA-RSFSAEGLGAADPVASNATADGRAQNRRVEIRLDVK 263


>gi|221196013|ref|ZP_03569060.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221202687|ref|ZP_03575706.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221176621|gb|EEE09049.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221182567|gb|EEE14967.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 405

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  +RL        +    L  +     V         ++++   R   MF   +    P
Sbjct: 251 REAQRLSPFDALARNLERRLRDEVAAGNVELIRDPAHHVLTL---RFAGMFVPGAVTVAP 307

Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303
               V+   G  +A   E   +R  G+ D++P  +  +  N  +S  RA    ++L+ +G
Sbjct: 308 WGASVVASAGREIASIAEGAVVRVVGYADSAPAGSARQISNQAISEARAEDVARILVAAG 367

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           V    + ++ G         +      + NRR++++V
Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403


>gi|227538856|ref|ZP_03968905.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241365|gb|EEI91380.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 230

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           I+      +FD + S         + K+   L    +    + GHTD          N +
Sbjct: 106 IVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPDTKILVIGHTDNV---GSLAANQK 162

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +S  RA +     +  G++  RI+   G  +     ++D     + NRR++I++
Sbjct: 163 VSEARAAAVKTYAVSQGLNGGRINT-EGKNYSEPLASNDTDAGRAENRRVEIVI 215


>gi|332280324|ref|ZP_08392737.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
 gi|332102676|gb|EGJ06022.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
          Length = 245

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 18/129 (13%)

Query: 226 ISIIDQRNTPMFD---KSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI 280
           I      +  +F      +S    + +  L  +   L        I + GHTD       
Sbjct: 116 IQRYTLNSDTLFAFDKSGTSDMSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRL---GS 172

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK----IASDPMN-----SAN 331
              N  LS  RA +  Q L+  G+  ++I+ I G    +        +D  +       N
Sbjct: 173 EDYNLTLSRKRAETVRQYLIAKGLPAEKITSI-GMGKSQPVKKCKYNNDRASLIVCLQPN 231

Query: 332 RRIDILVED 340
           RR+++ V+ 
Sbjct: 232 RRVEVEVDG 240


>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 358

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|153831721|ref|ZP_01984388.1| outer membrane protein OmpA [Vibrio harveyi HY01]
 gi|148872231|gb|EDL71048.1| outer membrane protein OmpA [Vibrio harveyi HY01]
          Length = 321

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + I G++D +        N +L+  RA +  +     G++ DR+  + G        ++
Sbjct: 238 QVEINGYSDTT---GSEAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASN 293

Query: 325 DPMNSA--NRRIDILV 338
           +       NRR++++V
Sbjct: 294 ETREGREENRRVEVVV 309


>gi|42524036|ref|NP_969416.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
 gi|39576244|emb|CAE80409.1| probable outer membrane protein [Bdellovibrio bacteriovorus HD100]
          Length = 440

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 97/293 (33%), Gaps = 15/293 (5%)

Query: 54  INATDDDTKKAIEQY---FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           ++  D   ++ + +Y              +     +      + ++         +   +
Sbjct: 154 LSPADKRGEEIVSRYRDLELKSVTKAYLGTAKDNLDTAKKAGADKSAPKSFGMAAMKYEN 213

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            +  I +  +        +      +    E  +     +SE+   + +      S  + 
Sbjct: 214 AEKLIKADPRNAPVIARASQDATRESQHLMEVTRKVNAGNSEELVLMAERQQRTISNLRS 273

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E        +      +R++   +  + + +    L +          T    +++ +  
Sbjct: 274 EYSSTEQELQTVQSEAERQRMELEKQQTLLNRAQALRSQLKPNEAEVFTENGKLMVRLKG 333

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
            +    F  + S   P+   +L+K+   LA    + + I GHTD       A  N  LS 
Sbjct: 334 LQ----FPTAQSNLGPKNQALLKKVEGALAGVTPKKVIIEGHTDNV---GSAEANRILSE 386

Query: 290 DRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            RA S    L+  G +  +++  + G  +      ++     + NRRID+++E
Sbjct: 387 KRAQSVENFLVSQGTLPAEKVESV-GMGYDNPVGNNNTAAGRAQNRRIDLVIE 438


>gi|223040101|ref|ZP_03610381.1| OmpA/MotB [Campylobacter rectus RM3267]
 gi|222878578|gb|EEF13679.1| OmpA/MotB [Campylobacter rectus RM3267]
          Length = 256

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 10/172 (5%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +        +   + K +  ++   ++   +++ L+  +    V FE + +G +I +  
Sbjct: 67  PDAGAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGFVIRLPA 126

Query: 231 QRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI--SIRGHTDA-SPFRNIARDNWR 286
                +FDK S+     + ++ L++I  V+A     +  ++ GHTD+  P     +DNW+
Sbjct: 127 NL---LFDKDSARLQNDDALLFLKRIAMVIAKLPPDVVANVIGHTDSEQPGSAEFKDNWQ 183

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           LS  RA S    L+K GV   +++  S  A       +        NRR++I
Sbjct: 184 LSSARAISVVTELIKDGVDPKKLTA-SAKAEFEPFATNFTEQGREKNRRVEI 234



 Score = 36.5 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 42/126 (33%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KK +   D P  L  W   + D M++L+ FF+++  ++  D    +A     +     
Sbjct: 1   MAKKLIDPADCPKCLPGWLAAFGDLMSLLLCFFVLLLSMSTMDAKKLEAAIGSLSGALGI 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L +  K     +   +  + +  + +  +   + ++       +     +          
Sbjct: 61  LESGVKPDAGAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGF 120

Query: 136 NSQQSE 141
             +   
Sbjct: 121 VIRLPA 126


>gi|88800584|ref|ZP_01116145.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
 gi|88776639|gb|EAR07853.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
          Length = 355

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 13/284 (4%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            +                 D+    + S Q++      +  TKN    ++ +T    + +
Sbjct: 67  AEQQRQTLTQARNQLTNELDQLRSAQNSVQSQQSQLQAQLSTKNQEVEQLQATLTATEAR 126

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             E N      +Q     + +L   +   +    +         E   +   + + +   
Sbjct: 127 LQEINTNLEVANQLIAEQQGALDEAATTEERFLAARQQLALEQAENETYSETVERLRQEM 186

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                 +  L  ++ + LS L  +        E   T I +       + +F    +   
Sbjct: 187 AAETAAMNALEAQLQTQLSQLNQEKEKLVTQLEDGTTAIKL-----PESILFASGRADIN 241

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLM 300
            E    L  +   L+      ISI+GHTD+             NW LS  RA SA + L+
Sbjct: 242 AEGRQSLANLATALSSFPNHLISIQGHTDSQTIAPATAEKYPTNWELSAARAASAVRELL 301

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           K G+  D++  + G+A  R  +          NRRI++++   Q
Sbjct: 302 KQGIPADQMQAV-GYADTRPLVEETSAQTRQQNRRIEVILLPNQ 344


>gi|256823021|ref|YP_003146984.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
 gi|256796560|gb|ACV27216.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
          Length = 330

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 8/157 (5%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A    +   +        +     ++ V  V        I ++         FD + +  
Sbjct: 176 ARTNSEDTSERVFAQVDVVEEKAQESKVVMVKASEMAQEIDLNGKVALYGLYFDTNKASI 235

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KS 302
             E+   L +I ++L  + +  + + GH+D          N  LS  RA S  Q L+   
Sbjct: 236 KAESKPTLDEIAKLLKDNPDLKLLVVGHSDNQ---GDFDYNIDLSKRRAESVKQALVSDY 292

Query: 303 GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
           GV+  R+    G  +     ++  +   + NRR++++
Sbjct: 293 GVNAARLKPW-GVGYAAPVASNKAEQGRAKNRRVELV 328


>gi|152981732|ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. Marseille]
 gi|151281809|gb|ABR90219.1| OmpA family protein [Janthinobacterium sp. Marseille]
          Length = 229

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   F    S   P    +L +    L  +    ++I GHTD++        N  LS D
Sbjct: 105 PSDISFATGRSDINPSLQPILDRFATGLVDNPTATVTIIGHTDST---GSDAINNPLSFD 161

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA      L   GV+  RI  + G   H    ++      + NRR++I V
Sbjct: 162 RASRTRDYLTGRGVAPQRIY-VDGRGSHEPIASNADAAGRARNRRVEIFV 210


>gi|86143203|ref|ZP_01061605.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
 gi|85830108|gb|EAQ48568.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
          Length = 279

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 74/195 (37%), Gaps = 7/195 (3%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +  + L    +L       ++     LSK     + + K L+D      S       D+
Sbjct: 72  DDNYQKLDLVENLAVMSESTKDKMRETLSKVDQNELAQAKSLEDSMNLAISYNLKKNLDD 131

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIR 269
            V             + +I+  +  +F+  S     +   +L+++ +V+       + + 
Sbjct: 132 SVGEDEDIQVDIDETVVMINVSDKLLFNSGSYRVSNKADGLLKRLADVINSEPAIKVMVE 191

Query: 270 GHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP 326
           GHTD    +  A   DNW LS++R+ +  + L  K  V   ++    G + +   + +  
Sbjct: 192 GHTDDQTVKPGAYIKDNWELSVERSTAIIRELQDKYNVDPAKLIAA-GRSSYLPLVDNAT 250

Query: 327 M--NSANRRIDILVE 339
               + NRR  I++ 
Sbjct: 251 KEDRAKNRRTRIVIL 265


>gi|167949850|ref|ZP_02536924.1| sodium-type flagellar protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 285

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  +          +L+++ + L      + + I GH D        + N +LS  RA +
Sbjct: 182 FAFNLHDLDASAKALLKELADYLNRDERVKSVRIEGHADDQ---GRRKYNLKLSERRAMA 238

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
               L++ GV + R++    +   R K+ S      + NRR+ IL+
Sbjct: 239 VKAYLVEQGVEQARLATFH-YGESRPKVRSRSQKARAKNRRVAILL 283


>gi|108761081|ref|YP_635504.1| OmpA family protein [Myxococcus xanthus DK 1622]
 gi|108464961|gb|ABF90146.1| OmpA family protein [Myxococcus xanthus DK 1622]
          Length = 352

 Score = 86.2 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 84/290 (28%), Gaps = 10/290 (3%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
            T + + +      K+          ++ P      ++    I +       D K     
Sbjct: 65  PTVRGLARLQGCPAKDTDGDGVEDALDKCPRHAGPASREGCPIRDSDEDGVEDAKDACPR 124

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                +R    +                       ++ C   D +     +E    P   
Sbjct: 125 VFGLLERQGCPVDDPDRDGVEGAADKCPDEPGPASREGCPIRDADGDGVPDEEDACPDEE 184

Query: 180 KEKILAM--KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
               L    +R      +A    +      A +          R  I    ++      F
Sbjct: 185 GLPSLRGCPERDVDGDGVADHRDNCPRERGAVDNQGCPAARKQRVVIRPDRLELLERITF 244

Query: 238 DKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
              ++   P     L  + +VL       VI+I GHTD             ++L RA + 
Sbjct: 245 APGTAALQPRVQPALDNVADVLLVHPRLGVIAIEGHTDNR---GDPDVQREVTLARAEAV 301

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
              L++ GV  DR+    GF   +   +++       NRR+D+ V   +G
Sbjct: 302 RDYLVERGVPPDRLEAW-GFGPDKPVESNETAQGREANRRLDLRVVAPRG 350


>gi|296534445|ref|ZP_06896882.1| chemotaxis protein MotB [Roseomonas cervicalis ATCC 49957]
 gi|296265230|gb|EFH11418.1| chemotaxis protein MotB [Roseomonas cervicalis ATCC 49957]
          Length = 143

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%)

Query: 5   GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
             +++     I+++++    D  ++ G+WKI YADF+T +MAFFL+MW+INAT D  +  
Sbjct: 2   AKRDKNQRTVIVVRREEGGGDGGHHGGAWKIAYADFVTAMMAFFLLMWLINATSDAQRVG 61

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           +  YF P    L     G  +       +S N +       + +  +     +   + + 
Sbjct: 62  LADYFAPTNV-LSRGPSGAGEPFGGRTINSTNTLAGETPPAMGERPMSPLPWTREDRPED 120

Query: 125 QRLENNIFYLSNSQQSEHCKNSL 147
           +  +         +     +   
Sbjct: 121 EPDDPPAEPQPPRRFRASPEAPE 143


>gi|126729097|ref|ZP_01744911.1| OmpA family protein [Sagittula stellata E-37]
 gi|126710087|gb|EBA09139.1| OmpA family protein [Sagittula stellata E-37]
          Length = 227

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+      I  L++    +    E    + GH D          N  L L RA + 
Sbjct: 83  FAFNSAQLDQGAIDTLREQARWIRQFPEVRFRVYGHADKV---GNQAYNKSLGLRRANAV 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  +  F   +  I ++     NRR
Sbjct: 140 VNYLVSQGISRSRLEAVVSFGETQPLIVTEGRERRNRR 177


>gi|167572326|ref|ZP_02365200.1| hypothetical protein BoklC_20981 [Burkholderia oklahomensis C6786]
          Length = 470

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +   P+ +  ++++G 
Sbjct: 242 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 299

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L  + +            
Sbjct: 300 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 359

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 360 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 391


>gi|146993|gb|AAA24237.1| outer membrane protein II [Escherichia vulneris]
          Length = 244

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 125 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 181

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D + +          +RR++I 
Sbjct: 182 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIE 240

Query: 338 VED 340
           V+ 
Sbjct: 241 VKG 243


>gi|118588929|ref|ZP_01546336.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
 gi|118438258|gb|EAV44892.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
          Length = 533

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYS 294
           FD +++   PE  ++++++ + L      I + GHTD+ P RN      NW LS++RA +
Sbjct: 418 FDVAAATLRPEFQLLVEQVSQTLDQVDGEILVVGHTDSDPIRNNPRFPTNWHLSVERAKA 477

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              V+     +  R+ ++ G         +        NRR+++ ++  
Sbjct: 478 VAAVMESVLQTPGRV-QVEGRGADEPIAPNTSKEGKALNRRVEVFLKPP 525


>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 358

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  +     PE    L ++   L +       + + G TD          N  LS
Sbjct: 230 KSDVLFTFNKDNLKPEGKQALDQLYNQLNNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 EKRAQSVVNYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|197119876|ref|YP_002140303.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
 gi|197089236|gb|ACH40507.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
          Length = 199

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 7/173 (4%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           K E       S      ++ +++ +  A      ++                  G    +
Sbjct: 29  KTEEPISAAQSAPAPAPVQTQQQARPEAPAAQQPITETTPSREQPVAQETPKDAGKAQEV 88

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
             +     F+  SS    E    L K  E L+        I G+ D          N  L
Sbjct: 89  QAELQKVYFNFDSSDLSEEARASLSKNAEYLSRQAGTKVRIEGNCDER---GSDDYNMAL 145

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
              RA SA   L+  G++ DR+S IS +   +       +   + NRR + ++
Sbjct: 146 GERRAKSAKDYLVNLGIASDRLSTIS-YGEEKPADPGHDEAAWAKNRRDEFVI 197


>gi|220905238|ref|YP_002480550.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869537|gb|ACL49872.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 331

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--KRK 189
            +LS+ ++          D+ +G DL +      +  +     +   +  K      K+ 
Sbjct: 128 PFLSSMKRDAAVILVTDGDNNRGADLVEVARQMYASQRNLVVHIISFADSKNGEETIKQV 187

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L      +           + + VL    +   +I +        F  +S     + +
Sbjct: 188 AALNPATIVVRGEELATSDAALERFVLSVFCQDEDVIVLRGVH----FAFNSYALDGKAM 243

Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L +   ++  +     +  G TD          N +LS +RA S    L+K G+   R
Sbjct: 244 GILNEAAGLIKANPNKRVVLAGWTDWI---GSDAYNMKLSQERANSVKNYLVKQGIPASR 300

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           ++ I G      K  ++       NRR +I
Sbjct: 301 MTAI-GRGKSF-KYNNETAEGRAMNRRTEI 328


>gi|254450850|ref|ZP_05064287.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
           238]
 gi|198265256|gb|EDY89526.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
           238]
          Length = 175

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F+  +S         L      L+ +++ +++  GH D          N  L   R
Sbjct: 65  DRVLFEVDTSTLTAVGRNTLDGQAGWLSTNSDYLAVIEGHADEQ---GTREYNLALGARR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDIL 337
           A +  + L+  G++  RI  +S +   R     + +   + NRR + I+
Sbjct: 122 ANAVREYLISRGLASSRIRTVS-YGKERPLAVCSEESCYAQNRRAVTII 169


>gi|89075798|ref|ZP_01162186.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
           SKA34]
 gi|90580128|ref|ZP_01235936.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
 gi|89048530|gb|EAR54105.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
           SKA34]
 gi|90439013|gb|EAS64196.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
          Length = 180

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F   +S   PE   +L+     L     +   + GH D          N  L   RA +
Sbjct: 79  FFKFDNSEIQPEYQAILEAHAAYLRDHPSIKVIVEGHADER---GTPEYNIALGERRANA 135

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             Q L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 136 VAQYLQALGVPASQLSIVS-YGEEKPLVLGHTDADYAKNRRAVLV 179


>gi|114048539|ref|YP_739089.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113889981|gb|ABI44032.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 372

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 8/134 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++   E    ++++   L  + E    I GH
Sbjct: 237 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGH 296

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  ++L++  G+S+ R++  +G+   +  +A D     
Sbjct: 297 ASNV---GKPDYNMTLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDTKEAH 352

Query: 329 SANRRIDILVEDRQ 342
           +ANRRI+ +V   +
Sbjct: 353 AANRRIEAIVTTTE 366


>gi|296283270|ref|ZP_06861268.1| hypothetical protein CbatJ_06596 [Citromicrobium bathyomarinum
           JL354]
          Length = 168

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           +  ++ +N   FD             LQ   + ++    +  +I GH D          N
Sbjct: 55  VRAVNGQNVIYFDTDRYNIDTADAAALQTQAQYMSQYPNITVTIEGHADER---GTREYN 111

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR-IDILV 338
             L   RA SA   L+  G++ +RI  +S +   R    +      + NRR + ++V
Sbjct: 112 LALGERRANSAKNYLVSLGIAANRIRTVS-YGEERPVATASTPEAWAKNRRAVTVVV 167


>gi|149200848|ref|ZP_01877823.1| OmpA family protein [Roseovarius sp. TM1035]
 gi|149145181|gb|EDM33207.1| OmpA family protein [Roseovarius sp. TM1035]
          Length = 220

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         L++  + +    E    + GHTDA         N  L + RA + 
Sbjct: 74  FAFNSAELDAGARDTLREQAQWIRQFPEVRFRVYGHTDAV---GSDSYNKSLGMRRAQAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  ++ F   +  I +      NRR
Sbjct: 131 VAFLTSQGISRARLEAVASFGETQPLIVTQGRERRNRR 168


>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 364

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G+TD          N +LS
Sbjct: 236 KSDVLFNFNKATLKPEGQQALDQLYTQLSNIDPKDGSAVVLGYTDRI---GSEAYNQQLS 292

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 293 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 351

Query: 338 VED 340
           V+ 
Sbjct: 352 VKG 354


>gi|269103007|ref|ZP_06155704.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162905|gb|EEZ41401.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 181

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
            +   I    + Q  T  F   ++   PE   +L+   E L       + I GH D    
Sbjct: 60  MSEQEIRNQQLRQETTVFFKFDNAEIQPEYQAMLEAHAEYLRDHPAVKVIIEGHADER-- 117

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +  + L   GV   ++S +S +   +  +        + NRR  
Sbjct: 118 -GTPEYNIALGERRAAAVVKYLQALGVPASQMSIVS-YGEEKPLVLGHTDADYAKNRRAV 175

Query: 336 IL 337
           ++
Sbjct: 176 LV 177


>gi|163745845|ref|ZP_02153204.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
 gi|161380590|gb|EDQ05000.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
          Length = 231

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+        VL++    +    E    + GHTD          N  L + RA + 
Sbjct: 86  FAFNSAQLDATAQAVLRQQAGWIRQFPEIRFRVYGHTD---LVGSQAYNRALGMRRAQAV 142

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  +   +  I +      NRR
Sbjct: 143 VGYLSTLGISPSRLEAVVSYGETQPLIVTQGRERRNRR 180


>gi|91777910|ref|YP_553118.1| putative flagellar motor protein motB [Burkholderia xenovorans
           LB400]
 gi|91690570|gb|ABE33768.1| Putative flagellar motor protein motB [Burkholderia xenovorans
           LB400]
          Length = 170

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 2   NSHGDKNQENDQFIIIKKKVAIDDTPNNLG-SWKIVYADFMTVLMAFFLVMWIINATDDD 60
           NS   + ++    +I+++    +D   + G +WKI YAD +T +MAFFL+MW++ +T   
Sbjct: 6   NSRAPQGEQALAPVIVRRSKKGEDHGGHHGGAWKIAYADCVTAMMAFFLLMWLLGSTSKY 65

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98
            K+ IE YFN    +L+  ++G    +    +     I
Sbjct: 66  DKQGIEDYFNTPLSSLIGGNEGTAAARPSVVQGGGRDI 103


>gi|56477938|ref|YP_159527.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
 gi|56313981|emb|CAI08626.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
           aromaticum EbN1]
          Length = 189

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F +  + P P     L ++   LA S E  I + GHTD+         N +LS+ RA + 
Sbjct: 85  FSRGGTEPQPVLTPNLDRVASALASSPEVEIRVFGHTDSLD---SELHNLQLSIQRAETV 141

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            + L + G+   R+    G         +      + NRR++I++ 
Sbjct: 142 AEHLRRRGIPLVRLHA-DGKGEAEPIADNATEAGRAKNRRVEIVLR 186


>gi|312621091|ref|YP_003993819.1| outer membrane protein, ompa/motb family [Photobacterium damselae
           subsp. damselae]
 gi|311872812|emb|CBX86903.1| outer membrane protein, OmpA/MotB family [Photobacterium damselae
           subsp. damselae]
          Length = 210

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 6/150 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + +  D+       L  ++         FE   +   I   D      F+  +S     +
Sbjct: 62  QIQQYDIVDVDKELLKNILGKMNSGEKCFEYLLSNASIERDDTTARVYFNFDNSKLTRAS 121

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           I +L K+ E +  S     I GHTD+         N  L   RA S  +  + +GV+  +
Sbjct: 122 IYILNKLIENVKASKSNYLIEGHTDSV---GTTSYNKDLGYRRAKSVIEFFVGNGVNRSQ 178

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +  IS     +    +D     S NRR++I
Sbjct: 179 LQGIS-EGELKPLETNDTSIGRSYNRRVEI 207


>gi|77456921|ref|YP_346426.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77380924|gb|ABA72437.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 166

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F         ++  ++++IG+ L     E + + GHTDA         N +LSL R
Sbjct: 59  GKVLFGSDVESLNKQSTEIVERIGKALLGVGIERVRVDGHTDA---SGKETYNQQLSLRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A S   VL   G+ ++ I ++ G        ++D       NRR+ I+V   
Sbjct: 116 AKSVSNVLTSVGMKQENI-QLQGLGSREPVASNDTAAGRTENRRVSIVVSAD 166


>gi|87199040|ref|YP_496297.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
 gi|87134721|gb|ABD25463.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
          Length = 170

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD            VLQ     LA      I+I GH D          N  L   RA SA
Sbjct: 68  FDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCDER---GTRDYNIALGERRANSA 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338
              L+  GV   RI+ +S +   R     + +   + NRR + + V
Sbjct: 125 KNYLVSLGVDPGRITTVS-YGKERPLALGSDEDSWAKNRRAVTVTV 169


>gi|49476137|ref|YP_034178.1| peptidoglycan-associated lipoprotein [Bartonella henselae str.
           Houston-1]
 gi|49238945|emb|CAF28242.1| Peptidoglycan-associated lipoprotein [Bartonella henselae str.
           Houston-1]
          Length = 174

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS   P+   +L +  E L        +  GH D          N  L   R
Sbjct: 64  DRVFFSLDSSSIEPDAEAILMRQAEWLLRYPFYSIVIEGHADER---GTREYNLALGQRR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GVS  RI  IS +   R           + NRR
Sbjct: 121 AVAVRNYLISLGVSAQRIQTIS-YGKERPVAVCDDISCWNQNRR 163


>gi|300770385|ref|ZP_07080264.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762861|gb|EFK59678.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
          Length = 230

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           I+      +FD + S         + K+   L    +    + GHTD          N +
Sbjct: 106 IVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPDTKILVIGHTDNI---GSLAANQK 162

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +S  RA +     +  G++  RI+   G  +     ++D     + NRR++I++
Sbjct: 163 VSEARAAAVKTYAVSQGLNGGRINT-EGKNYSEPLASNDTDAGRAENRRVEIVI 215


>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
 gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
          Length = 358

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|326772136|ref|ZP_08231421.1| OmpA family protein [Actinomyces viscosus C505]
 gi|326638269|gb|EGE39170.1| OmpA family protein [Actinomyces viscosus C505]
          Length = 529

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290
               F   S     +   VL  + E +        ++I GHTD          N  LS  
Sbjct: 243 GDVTFATDSDQLSTQADSVLATVVEQIKKYPSGGELTITGHTDDV---ADDAHNQDLSER 299

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA +  + L K          +SG      ++ +D       NRR++I +   +
Sbjct: 300 RAKAVSERLKKLTDLSAWKESVSGKGESSPRVPNDTDERRQINRRVEITLTPSK 353


>gi|294666305|ref|ZP_06731554.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603907|gb|EFF47309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 419

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS      +++       +T + +S     +  MF        P+   V+ +I   
Sbjct: 278 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGVIAQIAAA 332

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +      + + GHTD  P R+   +DN+ LS  RA +  QVL     +  R+  I G   
Sbjct: 333 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAI-GAGD 391

Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342
            +            + NRR++IL +  +
Sbjct: 392 SQPIAQPVQLPANRARNRRVEILFQPGE 419


>gi|255322336|ref|ZP_05363482.1| OmpA/MotB [Campylobacter showae RM3277]
 gi|255300709|gb|EET79980.1| OmpA/MotB [Campylobacter showae RM3277]
          Length = 256

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
               + +        +   + K +  ++   ++   +++ L+  +    V FE + +G +
Sbjct: 62  EGGAKPDVSAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGFV 121

Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI--SIRGHTDA-SPFRNIA 281
           I +       +F K S+     + ++ L++I  V+A     +  ++ GHTD+  P     
Sbjct: 122 IRLPANL---LFAKDSAKLQNDDALLFLKRIAMVIAKLPPDVVANVIGHTDSEQPASTEF 178

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           +DNW+LS  RA S    L+K GV   +++  S  A     + +        NRR++I
Sbjct: 179 KDNWQLSSARAISVVSELIKDGVDPKKLTA-SAKAEFEPFVTNFTEQGREKNRRVEI 234



 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 44/133 (33%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KK +   D P  L  W   + D M++L+ FF+++  ++  D    +A     +     
Sbjct: 1   MAKKLIDPGDCPKCLPEWLAAFGDLMSLLLCFFVLLLSMSTMDAKKLEAAIGSLSGALGV 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
           L   +K     +   +  + +  + +  +   + ++       +     +          
Sbjct: 61  LEGGAKPDVSAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGF 120

Query: 136 NSQQSEHCKNSLT 148
             +   +   +  
Sbjct: 121 VIRLPANLLFAKD 133


>gi|315498712|ref|YP_004087516.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
 gi|315416724|gb|ADU13365.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
          Length = 187

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 11/166 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +      R  + +    ++  T    +      G L E      ++   D      FD
Sbjct: 29  DDKITATNGRIDQQETRLTQLDQTTQEALTRATAAGKLAEGKFNYSVVLSDDSIK---FD 85

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAY 296
              ++       VL  + E L    + +   I+G TD++        N+RL   RA S  
Sbjct: 86  TDKAVLSEAGKQVLADLAERLKRDNKNVYLEIQGFTDST---GTDDINYRLGNARADSVK 142

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           + L   GV+ +R++ IS +   +    +      +ANRR+ I+V  
Sbjct: 143 RFLNSQGVALNRMASIS-YGAEQPIAPNSTAQGRAANRRVVIVVLS 187


>gi|85705152|ref|ZP_01036252.1| OmpA family protein [Roseovarius sp. 217]
 gi|85670474|gb|EAQ25335.1| OmpA family protein [Roseovarius sp. 217]
          Length = 219

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         L++    +    E    + GHTDA         N  L + RA + 
Sbjct: 74  FAFNSAELDTGARDTLREQARWIRQFPEVRFRVYGHTDAV---GSDSYNKTLGMRRAQAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  ++ F   +  I +D     NRR
Sbjct: 131 VAFLSSQGISRARLEAVASFGETQPLIVTDGRERRNRR 168


>gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355]
          Length = 363

 Score = 86.2 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 235 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 291

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +            +RR++I 
Sbjct: 292 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEID 350

Query: 338 VED 340
           V+ 
Sbjct: 351 VKG 353


>gi|24212756|ref|NP_710237.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24193397|gb|AAN47255.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 687

 Score = 86.2 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 10/221 (4%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           ++ + +  +      +    S   K  +   S K         L   +N++    +    
Sbjct: 466 EEGKTEETKIEQPIENQKPNSAALKVIVADASTKQIIPDAKVTLFTPMNRKGESLVQDAD 525

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236
           K+  L  K      +L    S  +S  +           T    +           +   
Sbjct: 526 KKSFLIKKLPDNDFELFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVY 585

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ + +    E   +L  +   L  ++++ I I GHTD          N RLS  RA + 
Sbjct: 586 FEFNKTKITEENKKLLDPLVGYLLKNASDKIEIGGHTDNV---ASKEYNTRLSAKRARNV 642

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
           Y+ L+  G+ E R+ +I  + + +    ++     + NRR+
Sbjct: 643 YEYLLSKGIPEKRM-RIRAYWYSQPDADNETETGRAKNRRV 682


>gi|332292539|ref|YP_004431148.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170625|gb|AEE19880.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 652

 Score = 86.2 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
             N   FD + S   P+  + L K+   +    ++ IS+R HTD+         N  LS 
Sbjct: 538 NLNPIYFDYNKSDIRPDAALELTKVISAMKQVPDMVISVRSHTDSR---GKDDYNLSLSD 594

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S    ++  G+  +RI    G+   +L  +       ++  +  NRR + +V
Sbjct: 595 RRAKSTVAYIISRGIDANRI-SGQGYGETQLVNSCNNNADCTEEQHQLNRRSEFIV 649


>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
 gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
 gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
 gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
          Length = 358

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|294789485|ref|ZP_06754721.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
 gi|294482565|gb|EFG30256.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
          Length = 307

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 17/152 (11%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                L    +  +  +S +V +        E     + +         +FD   S    
Sbjct: 156 DEAMHLMQKQQMQTHQISRVVPNCEQPPAPVEKVTIELKV---------LFDTDKSFVKS 206

Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
           +    ++++ E +        ++ GHTD+         N  LS  R  +   +L++  G+
Sbjct: 207 QYYSEIEQVAEYMKRFPNTSVTLEGHTDSR---ASDEYNIGLSQRRMNAVRDILIRRYGI 263

Query: 305 SEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
              R+  + G+   R    +    +   NRR+
Sbjct: 264 DGARVHAV-GYGESRPAYPNTTPENMHQNRRV 294


>gi|254474524|ref|ZP_05087910.1| OmpA family protein [Ruegeria sp. R11]
 gi|214028767|gb|EEB69602.1| OmpA family protein [Ruegeria sp. R11]
          Length = 185

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +        +I     +   F  +           LQ+  +  +
Sbjct: 52  VMDDGAEGFMTPHVTRDGKPVCRRGNICGVMPSDQFFATNKHRISAAGQKRLQEFFQ--S 109

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +     I GHTD+         N RLS  RA +  +V    G    RI +  G+     
Sbjct: 110 ANASAFIITGHTDSR---ASDEYNMRLSQRRANAVAEVGESVG---ARILEARGYGERDP 163

Query: 321 KIASDPMN--SANRRIDIL 337
           ++ +D  +  + NRR++I+
Sbjct: 164 RVPNDSASNMAQNRRVEII 182


>gi|147001|gb|AAA24241.1| outer membrane protein II [Escherichia vulneris]
          Length = 244

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 125 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 181

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D + +          +RR++I 
Sbjct: 182 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIE 240

Query: 338 VED 340
           V+ 
Sbjct: 241 VKG 243


>gi|308271860|emb|CBX28468.1| hypothetical protein N47_G37920 [uncultured Desulfobacterium sp.]
          Length = 191

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S++       +L+K    L   + + ++I GH D          N  L   RA SA
Sbjct: 90  FDYDSAVLSQSAQEILKKKAAYLEKYSAILVTIEGHCDDR---GTNEYNLALGEKRAQSA 146

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
              L+  G+S  RI  IS +   +      ++   + NRR   ++
Sbjct: 147 RNFLINLGISSSRIKTIS-YGEEKPLDPANNEVAWAKNRRAHFIL 190


>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
 gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
          Length = 367

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G TD        + N +LS
Sbjct: 239 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 295

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +            +RR++I 
Sbjct: 296 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEID 354

Query: 338 VED 340
           V+ 
Sbjct: 355 VKG 357


>gi|189500639|ref|YP_001960109.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
           BS1]
 gi|189496080|gb|ACE04628.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
           BS1]
          Length = 158

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+   P  +  L+   E L  +  +   I GH D       +  N  L   R
Sbjct: 53  KDVFFQYDSAELEPVAVSQLKNNAEWLNQNRTISAMIEGHCDER---GTSEYNMALGEKR 109

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           A +    L+++GV+  R+  +S F   R   +     +   NRR   +V+
Sbjct: 110 AETTKSFLVRAGVAASRLETVS-FGEERPFDSGHTEAAWSKNRRAHFVVK 158


>gi|162145880|ref|YP_001600338.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543812|ref|YP_002276041.1| OmpA/MotB domain-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784454|emb|CAP53984.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531489|gb|ACI51426.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 380

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   ++       ++    +      T  I + G+TD S   P    AR N  LS+ 
Sbjct: 271 VFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRGARYNMALSVR 330

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA +    L++ GV    I  + GF      +A+  +     NRR++I++
Sbjct: 331 RAQAVQAELIRDGVPGTAID-VHGFGETHPLVATGPNTREPQNRRVEIIL 379


>gi|226952116|ref|ZP_03822580.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
           ATCC 27244]
 gi|294648350|ref|ZP_06725858.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
           ATCC 19194]
 gi|226837144|gb|EEH69527.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
           ATCC 27244]
 gi|292825762|gb|EFF84457.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 187

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 79  FDYDSSELSNEDYQTLQAHAQFLVANANSRVALTGHTDER---GTREYNMALGERRAKAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +          ++     NRR++I
Sbjct: 136 ESFLVTNGVNPQQLEAVS-YGKEAPVNPGHNEAAWKENRRVEI 177


>gi|169795057|ref|YP_001712850.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii AYE]
 gi|260556541|ref|ZP_05828759.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
           19606]
 gi|332851095|ref|ZP_08433204.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6013150]
 gi|332869632|ref|ZP_08438843.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6013113]
 gi|332875985|ref|ZP_08443771.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6014059]
 gi|169147984|emb|CAM85847.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii AYE]
 gi|260409800|gb|EEX03100.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
           19606]
 gi|322509070|gb|ADX04524.1| pal [Acinetobacter baumannii 1656-2]
 gi|323519051|gb|ADX93432.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332730259|gb|EGJ61584.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6013150]
 gi|332732679|gb|EGJ63911.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6013113]
 gi|332735851|gb|EGJ66892.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
           6014059]
          Length = 191

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 83  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ SGV+  ++  +S +           +     NRR++I
Sbjct: 140 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181


>gi|313674153|ref|YP_004052149.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312940851|gb|ADR20041.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 485

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 18/278 (6%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
           I   F     ++  +   ++ +  P    ++N    ++ E + +  +  +  +  ++   
Sbjct: 221 INTKFEETFVSIDPSFDYLYYDSYPSGAQNRNIWRATLSEELKEEIIKARDQNKKKEIIE 280

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
           +     I    + +QSE      T ++E   +  +    E +   E       + +E   
Sbjct: 281 EPQSEEIIAKESDKQSEKIP---TENAESVANAKQPLQDEPTTAMESQPVAVKIDQEMDY 337

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             ++++  Q    +I   +     D  +K +        I            F   S   
Sbjct: 338 VKEQERNNQGFLAQIGEKIGLGGKDEEIKLIDAGAKGQKI-------NRNVYFKFDSDKL 390

Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L KI E L  + ++   + GHTDA         N  LS  RA      L+  G
Sbjct: 391 QGKFNSLLDKISEELEKNPQIKIMLEGHTDAI---GGEDINIDLSCSRANKVKDALIDRG 447

Query: 304 VSEDRISKISGFAHHRLKIASD---PMNSANRRIDILV 338
           +++ RI +IS     R    +D        NRR++  +
Sbjct: 448 INQYRI-EISCEGKERPIATNDDEFEGRELNRRVEFYL 484


>gi|261884038|ref|ZP_06008077.1| flagellar motor protein MotB [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 85

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           + KK+    +  +   SW + Y+D MT+L+A F+V++  ++ D    K   + FN     
Sbjct: 1   MAKKRKKKHEEGHVDESWLLPYSDLMTLLLALFIVLFATSSVDVQKLKQFSEAFNQIFDG 60

Query: 76  LMTASKGIFDEQNPPERSSQNKIDL 100
             +  +       P     +   D 
Sbjct: 61  GTSFMETPTSNPLPEAPKKEGNEDT 85


>gi|302347069|ref|YP_003815367.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302150976|gb|ADK97237.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 225

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  + +  V  V        + ++     +  +F  + S         L K 
Sbjct: 74  MDKVAREAAQQLPNARVDKVTDANGLDCVKVTF---DSGILFPLNGSNLSASAKNDLTKF 130

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             ++  ++     I+G+TDA         N  LS  RA +    L   GVS  +I  + G
Sbjct: 131 ASLMQRNSNCDVAIQGYTDA---SGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILV 338
           F        +  ++ ANRR+++ +
Sbjct: 188 FGSANPI-ENKTVSQANRRVEVYL 210


>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
 gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
          Length = 356

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  D+IS   G             +    +A       +RR++I 
Sbjct: 285 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|163796931|ref|ZP_02190887.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [alpha proteobacterium BAL199]
 gi|159177678|gb|EDP62229.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [alpha proteobacterium BAL199]
          Length = 165

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS         L+K    L    +  +++ GH D          N  L   R
Sbjct: 60  DRVFFALDSSEVAANGRTTLEKQAFWLRKYPQATVTVEGHADER---GTREYNLALGERR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A   L+  GV   RI+ IS +   R     +++   + NRR
Sbjct: 117 AAAARDYLVSLGVDPSRIATIS-YGKERPDVLGSNEEAWAKNRR 159


>gi|114764947|ref|ZP_01444120.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
 gi|114542659|gb|EAU45683.1| OmpA family protein [Roseovarius sp. HTCC2601]
          Length = 221

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F  +S+         L++    +    E    + GHTD          N RL + 
Sbjct: 72  PTMVTFAFNSAQLDNGARATLREQANWIRQFPEVRFRVYGHTD---LVGSPAYNKRLGMA 128

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           RA +    L   G+S +R+  +  +   +  I +      NRR
Sbjct: 129 RAQAVVSYLAAQGISRERLEAVVSYGETQPLIVTSERERRNRR 171


>gi|319796494|ref|YP_004158134.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315598957|gb|ADU40023.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 188

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
            N   FD   +        VL K+ E L   +   + + GHTDA+        N RLS+ 
Sbjct: 79  PNELSFDTGRANVKRNLAQVLDKVAEGLKSATAASVRVVGHTDAT---GSEEGNERLSVS 135

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA S    L+  GVS   I+   G         +      + NRR++I V ++
Sbjct: 136 RADSVRNHLVGRGVSTTAITT-DGRGSREPLADNGTAAGRAQNRRVEIFVAEK 187


>gi|238757126|ref|ZP_04618313.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
 gi|238704504|gb|EEP97034.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
          Length = 433

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVV--LQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
               +  P+FD +S+   P       L  + ++L H+      I GH+D +        N
Sbjct: 306 FSSAQMAPLFDSNSTKLKPNAQTNEILHSLLQLLEHNQGSKILIVGHSDNT---GSDSFN 362

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             +S  RA      L+K+         I G        ++D       NRR+++L+  +Q
Sbjct: 363 MTISEQRALVVRDWLIKNSSLSSENFIIRGMGSLEPVASNDTKIGQDQNRRVEVLLLPKQ 422


>gi|84501675|ref|ZP_00999847.1| OmpA family protein [Oceanicola batsensis HTCC2597]
 gi|84390296|gb|EAQ02855.1| OmpA family protein [Oceanicola batsensis HTCC2597]
          Length = 222

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+        +L +    +    EV   + GHTD       +  N+RL L RA + 
Sbjct: 79  FAFNSAALDATARQILARQAHWIRQFPEVRLRVYGHTD---LVGSSSYNYRLGLRRAQAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+S  R+  +      +  + +      NRR
Sbjct: 136 VHFLVAQGISRSRLEAVVSKGETQPLVVTQGRERRNRR 173


>gi|328470084|gb|EGF40995.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus
           10329]
          Length = 325

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I G++D +     A+ N +L+  RA +        G++ DR+  + G        +++  
Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300

Query: 327 -MNSANRRIDILV 338
               ANRR++++V
Sbjct: 301 QGREANRRVEVVV 313


>gi|268316295|ref|YP_003290014.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262333829|gb|ACY47626.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
          Length = 209

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                   +     E    GIL++     +  +FD  S+   PE    L+++ E L    
Sbjct: 65  QAAEMQQELPDARIERVGEGILVTF---DSGILFDFDSATLRPEAREKLRRLAESLKKYP 121

Query: 264 EV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           E  + I GHTD++        N RLS  RA +A   LM+ G+   RI +  G        
Sbjct: 122 ETEVLIVGHTDST---GPEEYNQRLSERRAEAAAAFLMQQGIRPSRI-RTMGKGETEPIA 177

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
           ++        NRR++I +   +
Sbjct: 178 SNATEEGRQLNRRVEIAIFASE 199


>gi|163732607|ref|ZP_02140052.1| OmpA family domain protein [Roseobacter litoralis Och 149]
 gi|161393967|gb|EDQ18291.1| OmpA family domain protein [Roseobacter litoralis Och 149]
          Length = 319

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 73/247 (29%), Gaps = 12/247 (4%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T   V   + +  Q + +                      L   +            
Sbjct: 77  PGLTPLQVITPLRAQLQAQGFDLAFECDAPTCGGFDFRFNIEVLPGPNMYVNISQYRYLT 136

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             S   +       +      +    + +        S +         + +L E     
Sbjct: 137 AFSAEPDGPRQAVGILVSTTASSSYVQVVSIDENTDLSVIVPRERPAEREPILAERNLDQ 196

Query: 224 ILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278
            +  +       +    F   +S   P     L+++ E L+ +  +   + GHTD +   
Sbjct: 197 SVQMLPQDGRYVLPGLAFAIGTSDLGPGPFPALKELSEFLSTTEGIRIALVGHTDTT--- 253

Query: 279 NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
                N  LS  RA S    L++  GV+ D++    G  +      +  D     NRR++
Sbjct: 254 GALATNISLSRARAQSVRARLIEVYGVAPDKVDA-EGMGYLAPIATNLTDEGRRQNRRVE 312

Query: 336 ILVEDRQ 342
           +++ + Q
Sbjct: 313 VVLLNTQ 319


>gi|153837108|ref|ZP_01989775.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
 gi|149749696|gb|EDM60441.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
          Length = 325

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I G++D +     A+ N +L+  RA +        G++ DR+  + G        +++  
Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300

Query: 327 -MNSANRRIDILV 338
               ANRR++++V
Sbjct: 301 QGREANRRVEVVV 313


>gi|91217237|ref|ZP_01254198.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
 gi|91184580|gb|EAS70962.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
          Length = 616

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 12/158 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPET 248
            LQ  A+   S  +      +   V              I+  +    FD       PE 
Sbjct: 463 DLQVNAEGYESQSNSFEVPQLQMVVRVALVPEMTSTEAKILILQERIFFDYDKVNIKPEA 522

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              L K+ E+L  +    I +  HTD          N +LS DRA S    L+++GV  +
Sbjct: 523 AFELDKLIEILKENENINIQVVSHTDER---GSGAYNMKLSQDRAGSTVAYLIENGVDPE 579

Query: 308 RISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340
           R+S   G     L        S+  +  NRR +  + D
Sbjct: 580 RLSS-EGKGKSELIKDCISGCSEEEHEENRRSEFKIVD 616


>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
          Length = 347

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 219 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 275

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +      P  +       +RR++I 
Sbjct: 276 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 334

Query: 338 VED 340
           V+ 
Sbjct: 335 VKG 337


>gi|126734660|ref|ZP_01750406.1| OmpA domain protein [Roseobacter sp. CCS2]
 gi|126715215|gb|EBA12080.1| OmpA domain protein [Roseobacter sp. CCS2]
          Length = 632

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 8/151 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250
           ++ L +     +       +       T    I  I+   +     FD  S+    +T  
Sbjct: 453 IEKLGQTADFEIDVTYVKELDPIAGIPTPEECIAQITAATEGRKITFDPGSADLTADTQP 512

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           V+  I ++L    +  I + G TD+         N +LS DRA +    L    V     
Sbjct: 513 VVDDIADILKACGDLRIKVSGFTDSQ---GGEVMNQQLSQDRADAVLTALRARRVPVSTF 569

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           + I GF        +D       NRRI+  +
Sbjct: 570 TSI-GFGEENPIADNDTEEGREANRRIEFSL 599


>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
 gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
          Length = 355

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S          L  I + L  + E  + + GHTD+   +     N +LS +RA   
Sbjct: 237 FAFDSYKITHADKERLAPIAKRLQDNPETELVVVGHTDS---KGAEAYNQKLSEERAQKV 293

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              LM +  +   R+ +  G        ++        NRR+D+ 
Sbjct: 294 ATFLMNEYNLDSSRV-RAEGRGELNPVASNKTEAGRTDNRRVDVT 337


>gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 680

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               +D  S+    +  + L K+  +L  +  +   +  HTDA      A  N  LS  R
Sbjct: 530 ENIYYDFDSANIRADAAIELDKLVTILKDNPPIKIELSSHTDAR---GEAAYNQELSKRR 586

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDILVED 340
           A SA   ++  G+   RI    G+   +L      ++  +  NRR +  V +
Sbjct: 587 AESAVAYIISQGIDPSRIKA-RGYGESQLIIEDAQTEEEHETNRRTEFKVTE 637


>gi|256820715|ref|YP_003141994.1| membrane-bound proton-translocating pyrophosphatase [Capnocytophaga
           ochracea DSM 7271]
 gi|256582298|gb|ACU93433.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga ochracea
           DSM 7271]
          Length = 919

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 77/281 (27%), Gaps = 12/281 (4%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F          +K  F+           K   +    +T ++V      T+       ++
Sbjct: 643 FQNNAGGAWDNAKKSFEAGVEINGQMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIK 702

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                            +    +     + +         +E                  
Sbjct: 703 LTCLVGLVIAPILGGHTADASGTPIEAQIRQGEGEGVMPVEEVVVIEEGKLNADGDFEYN 762

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIP 244
              L  L+   ++ L      +    V     +    +          +   F   S   
Sbjct: 763 VGDLFQLSLFDNTMLEVGKNSSEAHLVKLIEDKNLTTLEQFKDNWITLDRTYFKTGSDEL 822

Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              +   L+ I  +L    +  I + G+TD +        N +LS  RA S    L+  G
Sbjct: 823 TEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSVEGNKKLSERRANSVLNKLVALG 879

Query: 304 VSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341
            ++ ++S   G+         +D     + NRRIDI +  +
Sbjct: 880 ANKAQLSA-QGYGAEHPLCPANDTPECKAKNRRIDIRLTAK 919


>gi|167565227|ref|ZP_02358143.1| hypothetical protein BoklE_21929 [Burkholderia oklahomensis EO147]
          Length = 459

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +   P+ +  ++++G 
Sbjct: 227 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 284

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L  + +            
Sbjct: 285 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQ 344

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 345 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 376


>gi|119775600|ref|YP_928340.1| OmpA family protein [Shewanella amazonensis SB2B]
 gi|119768100|gb|ABM00671.1| OmpA family protein [Shewanella amazonensis SB2B]
          Length = 187

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  S+    E    L  + + +      + ++GHTD          N+RLS +RA +  
Sbjct: 84  FDFGSAFVPFEAAAKLAWLAKSIETDHVSLLLQGHTDDI---GTEAANYRLSAERADNVA 140

Query: 297 QVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             L M   + + RI+  S F        ++       NRR+DIL+ 
Sbjct: 141 ASLAMDFAIPKARITTAS-FGESMPVAPNNTEIGRQQNRRVDILIL 185


>gi|167770207|ref|ZP_02442260.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
           17241]
 gi|167667529|gb|EDS11659.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
           17241]
          Length = 321

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              +  + +  +   +          +PP   ++ L    ++   +  +      S   +
Sbjct: 53  PGDDTQQVVIGNAQDQGDQLLTATGDMPPPGDKESLERTDQQMPANFDELYEYLKSYAAS 112

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-- 266
             +   V        + I     +N   F   S+  L +   +L  +G+ L    + I  
Sbjct: 113 QGMEDSVQISKGDGRVYIRF---QNNLFFAPDSAAILADAYPLLDFLGDCLNAVDDEILL 169

Query: 267 -SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            +I GHT A P     +  +W LS +RA +    L      + +  +  G+  +     +
Sbjct: 170 VNINGHTAAVPNGETYQVSDWMLSSERASNIAIYLDDKKDVDPKKLRPMGYGKNFPVADN 229

Query: 325 DPMNSA--NRRIDILVEDRQ 342
           D +     NRR+DI++   Q
Sbjct: 230 DTIAGREENRRVDIVIISNQ 249



 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 44/100 (44%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
                 P + G+W   Y+D +T+L+ FF++++ +++ D +  + I + F+  G +     
Sbjct: 2   KKKVRPPEDTGTWMNTYSDLVTLLLTFFVLLYSMSSVDAEKWEMIVKAFSNPGDDTQQVV 61

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
            G   +Q     ++   +    D+   + +      + ++
Sbjct: 62  IGNAQDQGDQLLTATGDMPPPGDKESLERTDQQMPANFDE 101


>gi|50119379|ref|YP_048546.1| putative porin [Pectobacterium atrosepticum SCRI1043]
 gi|49609905|emb|CAG73343.1| putative porin [Pectobacterium atrosepticum SCRI1043]
          Length = 506

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R + LAK        +   ++       T   G++  + D     MFD +S+    + 
Sbjct: 78  QNREEALAKIAQEENIAITTRSLQSQEKSGTETVGLVAQVQDS---GMFDTNSAQLSTDG 134

Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +  ++KI   +     + VI + GHTDA+     A  N RLS  RA +  +VL ++G+S 
Sbjct: 135 LRQVKKIATAMKEGDQSGVILVVGHTDAT---GSAEWNQRLSEQRAQNVGRVLEQAGLSA 191

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            ++    G    R    +  +     NRR++I+
Sbjct: 192 QKLY-FQGAGSARPVADNVTITGRTSNRRVEIV 223


>gi|262039316|ref|ZP_06012632.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
 gi|261746660|gb|EEY34183.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
          Length = 104

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++++    + +FD   S   P+   +LQ + E +  +   ++I GHTD+   +     N 
Sbjct: 9   VTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHTDS---KGTNEYNM 65

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +L + RA S    +++ GV   RI  +           +
Sbjct: 66  KLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATN 104


>gi|227537401|ref|ZP_03967450.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242779|gb|EEI92794.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 655

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D        +   +L ++   L  +    I +  HTD+       + N +LS +R
Sbjct: 543 ENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATH---KYNMKLSQNR 599

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A +A   ++  G++ DRI    G+   RL          SD  + ANRR +I V +
Sbjct: 600 AQAAVDYIISRGIARDRIVA-KGYGETRLVNKCADGVKCSDEEHQANRRTEIKVLE 654


>gi|330445542|ref|ZP_08309194.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489733|dbj|GAA03691.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 180

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   +S   PE   +L+     L       + + GH D          N  L   RA 
Sbjct: 78  VFFKFDNSEIQPEYQAMLEAHAAYLRDHPSVKVIVEGHADER---GTPEYNIALGERRAT 134

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           +  Q L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 135 AVAQYLQALGVPASQLSIVS-YGEEKPLVLGHTDADYAKNRRAVLV 179


>gi|325068011|ref|ZP_08126684.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 499

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 76/287 (26%), Gaps = 14/287 (4%)

Query: 58  DDDTKKAIEQYF----NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           DD + K I + +        K     S+   +    P       +DL  +      +   
Sbjct: 31  DDASVKDIAESYIDGDGDVFKATHPLSRPGSNPAFEPAAGGVRLLDLPTNRVWVATTGVE 90

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
                N      +   +          +  + ++         +        + +  +  
Sbjct: 91  NKVKDNYNNLSLKPGESTSCFVLFGPVDAKQVTVFVPQAGFVTVNVLDSGAAAASGIDFK 150

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +        +    +          +          +            I +++     
Sbjct: 151 AIDKAFDSATIPQYTRDEADPKQALAAPVPIERYTKALDDSTSTHAGGKDITVTLASDVT 210

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDR 291
              F   S+         LQ +   LA       +SI GHTD          N  LS  R
Sbjct: 211 ---FASDSADLASGAEAQLQTVAGQLAQYPNGGTLSIVGHTDDVQ---DDAYNQTLSEKR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           A +    L +    +   + +SG    + K    +D   + NRR++I
Sbjct: 265 ANAVKTRLEQLTKLDKWQTSVSGKGESQPKINDTTDEARAVNRRVEI 311


>gi|319762344|ref|YP_004126281.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
           BC]
 gi|330825735|ref|YP_004389038.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
           K601]
 gi|317116905|gb|ADU99393.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
           BC]
 gi|329311107|gb|AEB85522.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
           K601]
          Length = 180

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    PE   VL+     L  S+     + GHTD          N  L   RA + 
Sbjct: 79  FDFDSFTVKPEYQSVLEGHSRYLKASSARKVMLEGHTDER---GGREYNLALGQKRAEAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            + L   GV + ++  +S +   +        +  + NRR+++
Sbjct: 136 RRSLALLGVPDAQMEAVS-YGEEKPAAQGHSESAFAQNRRVEL 177


>gi|163749262|ref|ZP_02156511.1| OmpA family protein [Shewanella benthica KT99]
 gi|161330981|gb|EDQ01907.1| OmpA family protein [Shewanella benthica KT99]
          Length = 220

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   F        P    VL  +  
Sbjct: 80  YMDVQEAELRKQLQSTGVSVTRSGDNIVLNM---PNEVTFGVDEVHLNPGAKKVLNSVAL 136

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +   +I G+TD+         N RLS  RA      L+   V   R+    G  
Sbjct: 137 VAKEYDQTQLNILGYTDS---SGSESYNLRLSKIRAIEVGNYLVGQNVEYARVKS-EGIG 192

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
             R   ++      + NRR++I++
Sbjct: 193 EARPISSNTTAAGRAQNRRVEIIL 216


>gi|39934198|ref|NP_946474.1| OmpA/MotB [Rhodopseudomonas palustris CGA009]
 gi|192289724|ref|YP_001990329.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648046|emb|CAE26566.1| omp16 protein [Rhodopseudomonas palustris CGA009]
 gi|192283473|gb|ACE99853.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
           TIE-1]
          Length = 165

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   S   P+    L K  + L        +I GH D          N  L   R
Sbjct: 57  DRVFFESDQSDLSPQAAATLDKQVQWLQTYSRYTFTIEGHADER---GTREYNIALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L+  G+   R+  IS +   R     +D    S NRR
Sbjct: 114 AQSVRNYLVSRGIDAQRMRTIS-YGKERPVAVCNDISCWSQNRR 156


>gi|315223848|ref|ZP_07865696.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
 gi|314946178|gb|EFS98179.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
          Length = 919

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   S      +   L+ I  +L    +  I + G+TD +        N +LS  R
Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSVEGNKKLSERR 867

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341
           A S    L+  G ++ ++S   G+         +D     + NRRIDI +  +
Sbjct: 868 ANSVLNKLVALGANKAQLSA-QGYGAEHPLCPANDTPECKAKNRRIDIRLTAK 919


>gi|84385674|ref|ZP_00988705.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
           12B01]
 gi|84379654|gb|EAP96506.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
           12B01]
          Length = 212

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++++    +L + ++   +  +  +  K  +    R G+L  +        F       
Sbjct: 58  QIEQQSDSSELKQALADQSNLGMNQSGCKTWISNQERHGLLARLH-------FGFDQHNL 110

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            P     L ++   L  +   I++ GHTD++        N  L L RA +    L+  GV
Sbjct: 111 SPMGSKALSQLAGELKTNGSAITVDGHTDSTGEAG---YNQALGLQRALTTSDGLVADGV 167

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            ++R+  I  F   +   ++      + NRR +I
Sbjct: 168 EKNRLV-IRSFGESKPIASNATAEGRAKNRRSEI 200


>gi|323435973|ref|ZP_01049351.2| OmpA family protein [Dokdonia donghaensis MED134]
 gi|321496288|gb|EAQ39323.2| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 547

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + +  +FD  S+     + + L  +   L  + E  I+I  HTDA      A  N RLS+
Sbjct: 435 KIDNILFDLDSAKIKEISTITLNTVVATLKANPELKIAINAHTDAQ---GSASYNKRLSM 491

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDILVEDRQ 342
            RA SA + L+  G+S+DR+S   GF   +L I         N  NRRI+ +V  ++
Sbjct: 492 RRAASAMEYLLSKGISKDRLSS-QGFGEEQLLINCTSCTPQENELNRRIEFVVISKE 547


>gi|259415100|ref|ZP_05739022.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259349010|gb|EEW60764.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 638

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 19/305 (6%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +     T       +          +      + +    PE  + +           +
Sbjct: 307 VTLVAAQGTAQGVFDHVVGELESALPQVFVLHAVLPE----PEEKNPDLTPEFTATLSPE 362

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
             V L+   ++  ++            +       +N+          +  + D    + 
Sbjct: 363 GQVQLRGRLSDNAQRRTVDSYAKARFGSGSVYLATRNAPDLPGVWPIRVLAALDALAQLE 422

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL--- 225
           +      P L   + ++ +     +               +  +           ++   
Sbjct: 423 RGSVTVTPELVAVRGMSHQENASAEIARMLSDKLGEAEDYELDITYEAPPEPEDQLMAPA 482

Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
                ++ I + +   F+  S+    ++  V+ KI ++L    E  + I+GHTD+     
Sbjct: 483 LCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQ---G 539

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
               N  LS  RA S    L    +         G+       ++   +    NRRI+  
Sbjct: 540 REEMNLNLSQARAQSVLNALRARRILTGSFVA-KGYGEDNPIASNSTEDGREANRRIEFR 598

Query: 338 VEDRQ 342
           + + +
Sbjct: 599 LIESE 603


>gi|295135723|ref|YP_003586399.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
           SM-A87]
 gi|294983738|gb|ADF54203.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
           SM-A87]
          Length = 536

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 13/138 (9%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVI 266
            DN+      +  +    I I    N   F+   S    E   VL K+ ++L  S    I
Sbjct: 395 NDNLYSFTRTKYVKKTRQIDIP-HENRIYFEFDKSKVTEEYQEVLDKVIDILKGSDATEI 453

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            I  H DA         N +LS  RA +  + L+  G+S + I+   G+   +       
Sbjct: 454 KIASHADAR---GTEEYNLKLSQRRADATKEYLVAKGISSENITT-KGYGESQPVNDCTE 509

Query: 327 MN-------SANRRIDIL 337
                    + NRR  I 
Sbjct: 510 ERGCTEAEYAKNRRSVIT 527


>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 356

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++  + +  +   F  + +   P+    L  I   +A      I + G+TD 
Sbjct: 222 SAPVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANIQVAGYTDR 281

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA-- 330
                    N +LS  RA +    L+  GVS+  IS  +G+        +  D +     
Sbjct: 282 I---GSDAYNQKLSQRRAETVANYLVSKGVSQQAISA-TGYGKANPVTGNKCDTVKGRKA 337

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V   +
Sbjct: 338 LIACLADDRRVEIAVNGTK 356


>gi|157368917|ref|YP_001476906.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
 gi|157320681|gb|ABV39778.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
          Length = 165

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     PE+   +QK+G  L         + GHTD          N +LSL R
Sbjct: 59  DKVLFGNNIGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNY---GEDSYNDQLSLRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A +   +L   G+    I    G         +      + NRR+ I+V 
Sbjct: 116 ANAVADLLASVGIPRANIET-RGMGKRDPVADNRTSSGRAENRRVAIVVT 164


>gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 356

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 ++  + +  +   F  + +   P+    L  I   +A      + + G+TD   
Sbjct: 224 PVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANVQVAGYTDRI- 282

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---- 330
                  N +LS  RA +    L+  GVS+  IS  +G+        +  D +       
Sbjct: 283 --GSDAYNQKLSQRRAETVANYLVSKGVSQQAISA-TGYGKANPVTGNKCDTVKGRKALI 339

Query: 331 -----NRRIDILVEDRQ 342
                +RR++I V   +
Sbjct: 340 ACLADDRRVEIAVNGTK 356


>gi|331007788|ref|ZP_08330902.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
           proteobacterium IMCC1989]
 gi|330418397|gb|EGG92949.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
           proteobacterium IMCC1989]
          Length = 171

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           + +   FD  SS    ++  +L      L      + + GH D          N  L   
Sbjct: 68  KASVFYFDFDSSALRADSRSLLDAHAAALKAKPRAVRLEGHADER---GTREYNIALGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           RA S    L+  GV+     ++  +   +     ++D     NRR++I
Sbjct: 125 RAQSVRAYLLSRGVTSP--IEVISYGEEKPAANASNDYAWQQNRRVEI 170


>gi|149372358|ref|ZP_01891546.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
 gi|149354748|gb|EDM43311.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
          Length = 631

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 12/161 (7%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           R  + Q    +++          +   +        I   I    N   FD   S    +
Sbjct: 475 RADQQQYQTNELALPDDIQKRKFLDVYLDLRELEHTIGTDIGLLFNPIYFDLDKSFIRSD 534

Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             + LQKI  +L    ++   +R HTD+         N  LS  RA +    L+K+G+  
Sbjct: 535 AAIELQKIISLLNQYPQMKIDVRSHTDSR---ADDAYNLDLSDRRAKATIAYLIKNGIDS 591

Query: 307 DRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            R+    G+   +L          +   +  NRR + ++ +
Sbjct: 592 SRL-SGRGYGETQLINGCSNGVDCTSIEHQLNRRSEFIIVE 631


>gi|167578636|ref|ZP_02371510.1| hypothetical protein BthaT_10878 [Burkholderia thailandensis TXDOH]
 gi|167616778|ref|ZP_02385409.1| hypothetical protein BthaB_10778 [Burkholderia thailandensis Bt4]
 gi|257140710|ref|ZP_05588972.1| hypothetical protein BthaA_16123 [Burkholderia thailandensis E264]
          Length = 575

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +   P+ +  ++++G 
Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 396

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L  + +            
Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 456

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488


>gi|56708795|ref|YP_164836.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
 gi|56680480|gb|AAV97145.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
          Length = 180

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F   S     E    L++  +          I GHTD+         N RLS++RA S 
Sbjct: 82  FFATDSYRISSEGQARLRQFFQ--ETGANGYIITGHTDSR---ASDAYNLRLSVNRANSV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            +V   +G    RI  + G+     ++ +      + NRR++I+
Sbjct: 137 ARVGRATG---ARIVDVRGYGERDPRVPNTSAANMAQNRRVEII 177


>gi|86137204|ref|ZP_01055782.1| OmpA domain protein [Roseobacter sp. MED193]
 gi|85826528|gb|EAQ46725.1| OmpA domain protein [Roseobacter sp. MED193]
          Length = 329

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F+  +    PE I  L+ +   +   ++  + I GHTD+        DN  LSL R
Sbjct: 221 DGVVFETGAETLSPEAITSLRGLAGFMEEQSKAQVLIVGHTDSV---GGLEDNTSLSLRR 277

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A      L+ + GV+E RI  I+G  +     ++        NRR+++++  R
Sbjct: 278 AQMVKDALVSALGVAEGRI-SIAGAGYMAPIASNLTAAGREKNRRVEVVLLAR 329


>gi|332286730|ref|YP_004418641.1| OmpA/MotB [Pusillimonas sp. T7-7]
 gi|330430683|gb|AEC22017.1| OmpA/MotB [Pusillimonas sp. T7-7]
          Length = 220

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
           + E     + ++I    +   FD       P  + VL  +   L    E      G+TD+
Sbjct: 97  VTEMPDGTLRVNI---PSNVSFDTGKYALKPALLPVLDSVARALVQHPELRAKSIGYTDS 153

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +     A+ N  LS++RA +    L   GV    ++   G         +        NR
Sbjct: 154 T---GSAQVNQTLSVNRARAVANYLSDKGVPVGNLTA-EGRGPSNPVGDNATAEGRAMNR 209

Query: 333 RIDILV 338
           R+++ +
Sbjct: 210 RVELYL 215


>gi|167644957|ref|YP_001682620.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167347387|gb|ABZ70122.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 190

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDN 284
           S++   ++  F  +     PE    L      L    + +   I+G TDA       + N
Sbjct: 77  SVVLSDDSVKFPLNRHELSPEAEQRLADFASKLKGDNKNVYLEIQGFTDA---SGDPQYN 133

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
             L  +RA +  + L K GV  +R++ IS +        +D     + NRR+ I V  
Sbjct: 134 ETLGSERAETVRKFLSKQGVPLNRMATIS-YGEDDPVAPNDNPDGRAQNRRVVIQVLA 190


>gi|169632713|ref|YP_001706449.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii SDF]
 gi|169151505|emb|CAP00268.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii]
          Length = 191

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 83  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ SGV+  ++  +S +           +     NRR++I
Sbjct: 140 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181


>gi|163803132|ref|ZP_02197015.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
 gi|159173032|gb|EDP57865.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
          Length = 320

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 7/129 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
            + V        +      Q  T  F   S+     +            +    + I G+
Sbjct: 185 QEVVETRPATNIVDQEYPAQTTTVQFGLESAKLQDASAFNGTVELMN-TYPQAQVEINGY 243

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329
           +D +     A  N +L+  RA +  +     G++ DR+  + G        +++      
Sbjct: 244 SDTT---GAAAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASNETRKGRE 299

Query: 330 ANRRIDILV 338
            NRR++++V
Sbjct: 300 QNRRVEVVV 308


>gi|297518161|ref|ZP_06936547.1| outer membrane protein A [Escherichia coli OP50]
          Length = 171

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 43  KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 99

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 100 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 158

Query: 338 VED 340
           V+ 
Sbjct: 159 VKG 161


>gi|85375533|ref|YP_459595.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
 gi|84788616|gb|ABC64798.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
          Length = 231

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 10/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +  L       GV  E       I ++   +   F   S+         L +I E L
Sbjct: 79  DDQIRELDEQTAGSGVDVEEVGDQDAI-LVRLPDGVTFASGSARINSAFYPTLNEIAESL 137

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  I + G TD +        N +LS  RA +    L+  GV+  RI    G+   
Sbjct: 138 KRYPNSLIDVYGFTDTT---GSDALNQQLSESRAQTVADYLVARGVARSRI-ATQGYGER 193

Query: 319 RLK----IASDPMNSANRRIDILVE 339
           R       A +     NRR++I + 
Sbjct: 194 REYLRIQTADNVNEPLNRRVEIKIT 218


>gi|329114380|ref|ZP_08243142.1| Outer membrane protein [Acetobacter pomorum DM001]
 gi|326696456|gb|EGE48135.1| Outer membrane protein [Acetobacter pomorum DM001]
          Length = 452

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RNIARDNWRLSL 289
             FD   S        ++    +  AH     I++ G+TD S      +     N RLSL
Sbjct: 342 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 401

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
            RA      LM+ GV    I  I G+      + +  +   + NRR++I+  
Sbjct: 402 RRAEVVKAELMRDGVPGTTID-IHGYGETHPLVTTGPNTKEAQNRRVEIIFR 452


>gi|325915795|ref|ZP_08178096.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537992|gb|EGD09687.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 412

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             ++   L+      ++        +T + +S     +  MF        PE   ++ +I
Sbjct: 268 QVRLKQLLATQQRAGLLSVEEQADGQTRVRLS-----SAAMFASGGVEVEPEQRGLIAQI 322

Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +      + + GHTD  P R+    DN+ LS  RA +  Q+L     +  R+  + G
Sbjct: 323 AAAIDQLPGRVIVVGHTDDVPVRSLRFADNYALSGARAAAVAQLLRTHLATPGRVEAL-G 381

Query: 315 FAHHRLKI-----ASDPMNSANRRIDILVEDRQ 342
               +         ++   + NRR++IL +  +
Sbjct: 382 AGDSQPVAQPVQLPAN--RARNRRVEILFQPGE 412


>gi|288801975|ref|ZP_06407416.1| lipoprotein PG3 [Prevotella melaninogenica D18]
 gi|288335410|gb|EFC73844.1| lipoprotein PG3 [Prevotella melaninogenica D18]
          Length = 225

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  + +  V  V        + ++     +  +F  + S         L K 
Sbjct: 74  MDKVAREAAQQLPNARVDKVTDANGLDCVKVTF---DSGILFPLNGSNLSASAKNDLTKF 130

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             ++  ++     I+G+TDA         N  LS  RA +    L   GVS  +I  + G
Sbjct: 131 ASLMQRNSNCDVAIQGYTDA---SGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILV 338
           F        +  ++ ANRR+++ +
Sbjct: 188 FGSANPI-ENKTISQANRRVEVYL 210


>gi|256026544|ref|ZP_05440378.1| Outer membrane porin F [Fusobacterium sp. D11]
          Length = 391

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 79/264 (29%), Gaps = 8/264 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   +     +    DE    +R+                 VD +       ++ +    
Sbjct: 126 NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNKVSFQ 185

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +   + E    ++T + +          +E + +    Y     +       K K
Sbjct: 186 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 245

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
            ++    K        L        +        I  +  +I   +  +FD       PE
Sbjct: 246 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 305

Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              VL+ +  VL  +  +   I GHTD+       + N  LS +RA +    L   G++ 
Sbjct: 306 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 362

Query: 307 DRISKISGFAHHRLKIASDPMNSA 330
           +    I G+   R   ++D     
Sbjct: 363 E--ITIKGYGKTRPIASNDTPEGK 384


>gi|28900103|ref|NP_799758.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365754|ref|ZP_05778250.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
 gi|260880676|ref|ZP_05893031.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|260897717|ref|ZP_05906213.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|260899371|ref|ZP_05907766.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|28808386|dbj|BAC61591.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086262|gb|EFO35957.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
 gi|308092198|gb|EFO41893.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
 gi|308109307|gb|EFO46847.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
 gi|308114934|gb|EFO52474.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
          Length = 325

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I G++D +     A+ N +L+  RA +        G++ DR+  + G        +++  
Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300

Query: 327 -MNSANRRIDILV 338
               ANRR++++V
Sbjct: 301 QGREANRRVEVVV 313


>gi|317151982|ref|YP_004120030.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942233|gb|ADU61284.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 273

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 17/155 (10%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +L  L  +NI   + F + R    + I+    + +F   +         VL     V A
Sbjct: 86  ESLKALKWENIDDDINFRSNRF---VQILSIDASLLFGPDAVTLSESGQAVLDGYMPVFA 142

Query: 261 HSTEVISIRGHTDASPF-------RNIARDN----WRLSLDRAYSAYQVLMKSGVSEDRI 309
                + + GHT                 +N    W++SL RA + Y+ L+  G+    +
Sbjct: 143 QVQYPLLLAGHTSQLRDELGADYKPGDDEENPDLSWKISLSRALAVYRHLIDRGMRPG-M 201

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            ++ GF  +            + NRR+DI+++ R 
Sbjct: 202 LRVEGFGKYMPFYTQTTVESRARNRRVDIVLDKRN 236



 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
          K         +  W I ++D MT+++ FF+++  ++  D   K                +
Sbjct: 3  KKGKKHICEEMPPWMITFSDVMTLMLTFFVLLVSMSHIDPRRKLVALGSIIGTFGWEDAS 62

Query: 80 SKGIF--DEQNPPERSSQNKID 99
           +     D +   E    +  D
Sbjct: 63 YEVFSKKDTRRTVEPGPIDSGD 84


>gi|213419089|ref|ZP_03352155.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 126

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 41/84 (48%)

Query: 31  GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90
           GSWKI YADFMT +MAFFLVMW+I+ +       I +YF       +T    I + ++P 
Sbjct: 1   GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGNRIANSKSPI 60

Query: 91  ERSSQNKIDLSIDEHITKNSVDLK 114
                +      +     N  +LK
Sbjct: 61  PGGGDDYTQQQGEVEKQPNIDELK 84


>gi|118588924|ref|ZP_01546331.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
 gi|118438253|gb|EAV44887.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
          Length = 234

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291
             F+ +S+   P     L++  + +           I GHTD          N RLS DR
Sbjct: 129 VSFEYASARLSPSAQANLREFAKGINDPDLAKATFVIEGHTDGI---GSTSYNQRLSEDR 185

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335
           A +  Q L+  GVS DR+  ++ +   R K+A  +DP    NRR++
Sbjct: 186 AQAVTQFLVNLGVSRDRLKTVA-YGETRPKVADVNDPA---NRRVE 227


>gi|319404756|emb|CBI78357.1| Outer membrane lipoprotein omp16 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 168

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS    +   +L +  E L       I+I GH D          N  L   R
Sbjct: 58  DRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADER---GTREYNLALGQRR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           A +    L+  GVS  R++ IS +   R      +    + NRR  +++ +
Sbjct: 115 AVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVINN 164


>gi|156975609|ref|YP_001446516.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
 gi|156527203|gb|ABU72289.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
          Length = 230

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F        P    VL  +   LA +   +++ GHTD          N  L  +RA S  
Sbjct: 119 FAFDRFNLTPLARDVLSSVARQLAQTDYQVTVEGHTDWI---GTKAYNQTLGHNRAKSTA 175

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           + L   GVSE + + +  F        ++     S NRR D+ +   +
Sbjct: 176 RELHYYGVSEQK-TTLKSFGESEPIATNNTSSGRSKNRRADVYIPADE 222


>gi|330947752|gb|EGH48208.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 102

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P +  +L+ +  +  +   V+ I G+TD++      +DN +LS DRA +   VLM  GV 
Sbjct: 1   PPSRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDNLKLSKDRAQAVADVLMDLGVD 57

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           E RI  + G+       A+      + NRR++I+  D +G
Sbjct: 58  EKRIH-VEGYGQEFPVNANTSERGRAQNRRVEIVFSDEKG 96


>gi|300723714|ref|YP_003713021.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
           19061]
 gi|297630238|emb|CBJ90889.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 161

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
           +       +F  + S   PE    L+++  VL+        + GHTD          N +
Sbjct: 49  LFGMSEKVLFGNNQSHLRPEGEAKLKELASVLSKVGIHHARLDGHTDNY---GEVSYNNQ 105

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           LSL RA +    L   G+    ++   G    +    +      + NRR+ I++   
Sbjct: 106 LSLKRANTVADALTDGGMQRANLTT-RGLGPSQPIADNRSSKGRAENRRVAIVITAP 161


>gi|269964170|ref|ZP_06178467.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
 gi|269831125|gb|EEZ85287.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
          Length = 205

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S    P     + ++   L       I I+G+         A  N  LS  RA +
Sbjct: 83  LFANDSDSINPVFQRKITELAAFLKKYPATSIEIQGYASKV---GTAAYNLELSRRRASN 139

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
              +L+K G+SE R+  I GF    L      D  ++ NRR+   V   +G
Sbjct: 140 VRNLLIKQGISEKRL-TIVGFGDTHLVQLGTDDVSHALNRRVTATVIGHKG 189


>gi|289207752|ref|YP_003459818.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
 gi|288943383|gb|ADC71082.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
          Length = 188

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+        + + +L+     L+ ++   + + GHTD          N  L   
Sbjct: 79  ERLVYFEFDRDEVQSQYMDMLEAHAAYLSQNSGARLRLEGHTDER---GTREYNLGLGER 135

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           RA S  ++L  +G S+D+I ++  +          ++   + NRR++++ E R+
Sbjct: 136 RAQSVRRILTLNGASDDQI-EVISYGEEMPVAFEQNEEAWAKNRRVELVYESRR 188


>gi|154173933|ref|YP_001408144.1| OmpA/MotB [Campylobacter curvus 525.92]
 gi|153793024|gb|EAU00162.2| OmpA/MotB [Campylobacter curvus 525.92]
          Length = 249

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 12/207 (5%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +        +          + +      + + +E+     + K K  +   +    +L+
Sbjct: 26  ATMDAKKVEAAVGSLAGALSVLEGGARPDNQDDQESELEKQIKKTKGQSTSSQGEFSELS 85

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKI 255
             I   ++ L++ +    +  + +  G +I +    +  +F++  +     +  + L++I
Sbjct: 86  ATIKK-INELLSASGAPEISIDESEDGFIIRL---PSALLFERGKAQIENDDARLFLKRI 141

Query: 256 GEVLAHSTE--VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             V+A  T    I I GHTD       +I +DNW+LS  RA S  + ++ +GV   R+  
Sbjct: 142 AMVIAKLTPDVNIDIVGHTDDQRPDMNSIFKDNWQLSTARAISVVEEMVANGVDARRLIA 201

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDI 336
            SG A +    ++      + N R++I
Sbjct: 202 -SGRASYDPFASNQTPEGRAKNNRVEI 227


>gi|126740854|ref|ZP_01756539.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
 gi|126718150|gb|EBA14867.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
          Length = 308

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 68/224 (30%), Gaps = 10/224 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +     + +  LS+ +     K  L   +E+ +++                       E 
Sbjct: 91  EVVPAPDMLVSLSDYEFLSAAKPLLPGQAEQAQEVVSLLVSHSGYATFLQIIETGPVMED 150

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                              +      D+        +  + +L          +F   S 
Sbjct: 151 QPPETEPA--ASSPNLSEVSDEEAKPDSGDHQSEALSLSSQLLAEGHVILEGLVFKSGSV 208

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                 +  L+++ + L    E  + I GHTD+         N  LS  RA +    L++
Sbjct: 209 RLGQRAVQSLEELAQFLKDHPEARVLIVGHTDSV---GSLASNRSLSERRAEAVRGALIE 265

Query: 302 S-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           + G+   R+   +G  +     ++        NRR++ ++   +
Sbjct: 266 NSGIDNARVQA-TGVGYAAPIASNLSPAGREKNRRVEAVLLSSK 308


>gi|126642630|ref|YP_001085614.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           baumannii ATCC 17978]
          Length = 170

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 62  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ SGV+  ++  +S +           +     NRR++I
Sbjct: 119 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 160


>gi|260551454|ref|ZP_05825638.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
 gi|260405448|gb|EEW98941.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
          Length = 191

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 83  FDYDSSDLSAEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ SGV+  ++  +S +           +     NRR++I
Sbjct: 140 QSYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181


>gi|149188836|ref|ZP_01867126.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
 gi|148837256|gb|EDL54203.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
          Length = 221

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F        P     L  + + LA +   +++ GHTD          N  L + RA +  
Sbjct: 113 FAFDKYNLTPLAHKTLTGVAKQLAANNFEVTVEGHTDWV---GSDEYNQALGMRRATATA 169

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             L  +GV ++  + +  F       ++   +    NRR D+ +
Sbjct: 170 NELASNGVRKEN-TTLKTFGESEPLASNKTADGRSQNRRSDVYI 212


>gi|83950067|ref|ZP_00958800.1| OmpA family protein [Roseovarius nubinhibens ISM]
 gi|83837966|gb|EAP77262.1| OmpA family protein [Roseovarius nubinhibens ISM]
          Length = 220

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         L++    +    E    + GHTD          N  L + RA + 
Sbjct: 75  FAFNSAQLDAGARDTLREQAHWIRQFPEVRFRVYGHTDKVGSHG---YNKALGMARARAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  ++ F   +  I ++     NRR
Sbjct: 132 VAYLASQGISTSRLEAVASFGETQPLIVTEGRERRNRR 169


>gi|253996272|ref|YP_003048336.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
 gi|253982951|gb|ACT47809.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
          Length = 365

 Score = 85.8 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 14/111 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F    +     +++  + + ++        + + GHTD          N +LS  RA  
Sbjct: 248 LFAFDEAKLKDTSVLDNEVVPKMKENKIFASVKVTGHTDKL---GSEAYNQKLSEKRANQ 304

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDI 336
               L+  G+  DR+  + G       ++ D +            NRR++I
Sbjct: 305 VRDYLIAQGIEADRLVAV-GKGELVPVVSCDGVKGRKALIECLAPNRRVEI 354


>gi|332877756|ref|ZP_08445497.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684336|gb|EGJ57192.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 648

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   P+  V L KI EV+    ++   IR HTD+         N +LS  RA + 
Sbjct: 540 FDYNKANIRPDAAVELTKIVEVMREYPKMKIDIRSHTDSR---GADSYNLKLSDRRAKAT 596

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            + ++K G+   R+    G+   RL          ++  +  NRR + +V
Sbjct: 597 LEWIVKQGIDRKRLKA-KGYGETRLVNGCSNGVPCTEEEHQENRRSEFIV 645


>gi|83717203|ref|YP_440080.1| hypothetical protein BTH_II1886 [Burkholderia thailandensis E264]
 gi|83651028|gb|ABC35092.1| OmpA domain protein [Burkholderia thailandensis E264]
          Length = 594

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +   P+ +  ++++G 
Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 415

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L  + +            
Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 475

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507


>gi|149202108|ref|ZP_01879081.1| OmpA family protein [Roseovarius sp. TM1035]
 gi|149144206|gb|EDM32237.1| OmpA family protein [Roseovarius sp. TM1035]
          Length = 179

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +       +++    N   +F   S+         L++  +   
Sbjct: 46  VMDDGAEGYMSPHVTRQGIPVCREVNLCGVVNTDQLFATDSARIHASGQQRLREFFQQAG 105

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +   +I GHTD+         N  LSL RA S   V   SG S   I+ + G+     
Sbjct: 106 AVS--YTIVGHTDSR---ASDEYNMDLSLRRANSVAAVARSSGAS---IADVRGYGERVP 157

Query: 321 KIASDPMN--SANRRIDIL 337
           K +++     + NRR++IL
Sbjct: 158 KASNNTAEGMAQNRRVEIL 176


>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
          Length = 331

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S    P+ I  L+ I + L    E  + + GHTD++        N +LS  RA   
Sbjct: 223 FAFDSVKLAPKYIDQLKPIAQQLIKYPEAELIVIGHTDST---GPESYNQQLSERRAALV 279

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
              L     ++++RI + SG      K ++      + NRR+ + 
Sbjct: 280 ADYLATHFAIAKNRIKE-SGRGELAPKASNATKDGRALNRRVSVF 323


>gi|91224215|ref|ZP_01259478.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
 gi|269965628|ref|ZP_06179741.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
 gi|91191126|gb|EAS77392.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
 gi|269829696|gb|EEZ83932.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
          Length = 326

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 11/140 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             +V +  V+ V+     T I+  +       T  FD  S+     +   L    +++  
Sbjct: 181 EPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDASN--LSGTVDLMNT 238

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  + I G++D +     A  N +L+  RA +        G++ +R+  + G      
Sbjct: 239 YPQAQVEITGYSDTT---GSAAYNKQLTEKRAKAVADEFQAKGIAAERM-TVKGMGEANP 294

Query: 321 KIASDP--MNSANRRIDILV 338
             +++       NRR++++V
Sbjct: 295 VASNETRQGRQMNRRVEVVV 314


>gi|51245063|ref|YP_064947.1| outer membrane porin F [precursor] [Desulfotalea psychrophila
           LSv54]
 gi|50876100|emb|CAG35940.1| related to outer membrane porin F [Precursor] [Desulfotalea
           psychrophila LSv54]
          Length = 241

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 9/107 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+        +L ++   L         + I+GHTD+         N +LS  RA 
Sbjct: 133 FDLNSARLRRSAYPLLAELARALEDERVVEHQVCIKGHTDS---AGAGSYNLQLSYSRAN 189

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    L  +G+S D++ ++ G+  +   + +        NRR+++ +
Sbjct: 190 AVRDYLAGAGMSVDKL-EVFGYGENMPLVTNSSEANRQLNRRVEVSL 235


>gi|330993344|ref|ZP_08317279.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
 gi|329759374|gb|EGG75883.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
          Length = 368

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   +     +  ++ +  +   H     I + G+TD +   P     + N  LS+ 
Sbjct: 259 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 318

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV  + I  I G+      + +  D     NRR++I++
Sbjct: 319 RADSVKAELIRDGVPANAID-IHGYGEAHPLVPTGPDTREPQNRRVEIIL 367


>gi|299769114|ref|YP_003731140.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
 gi|298699202|gb|ADI89767.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
          Length = 186

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 78  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 134

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +       A   +     NRR++I
Sbjct: 135 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 176


>gi|319793801|ref|YP_004155441.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315596264|gb|ADU37330.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 215

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ +    +K++K   +  + +   L+G +A               I IS      + +
Sbjct: 43  ELATKLEAEVKQRKVEAERLQTLEQALAGPLAAG-----RVTLDNGRIGIS-----GSVL 92

Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289
           F  +S+   PE   +L+     +   L    E++ + G TD    R       DNW LS 
Sbjct: 93  FALNSAELQPEGRQLLKSLAAPLAAYLQARNEMLMVSGFTDDRQVRGGNKQFADNWELSA 152

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
            RA +  + L++ G+    +   + F   +   ++      S NRR++
Sbjct: 153 QRALTVTRALIEEGIPSSSVFAAA-FGAEQAVASNADADGRSKNRRVE 199


>gi|224532213|ref|ZP_03672845.1| flagellar motor apparatus [Borrelia valaisiana VS116]
 gi|224511678|gb|EEF82084.1| flagellar motor apparatus [Borrelia valaisiana VS116]
          Length = 260

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      ++NW LS  R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSTARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   +   +++GF   R     D       NRRIDIL+   
Sbjct: 208 NVKSIENKFEVAGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RIKKPLKCDEGSPDYMVTYGDMVTLLLVFFVTMFSLNDI 42


>gi|113474200|ref|YP_720261.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
 gi|110165248|gb|ABG49788.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
          Length = 246

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 82/249 (32%), Gaps = 7/249 (2%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
                     ++     +    N K +    +  +   +             + +E  K 
Sbjct: 1   MAIAFQYPSTSQKVPIAEKLLNNFKSRVSEKQLPLVSTTPPAPILETIKPRVQLTEAEKI 60

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             ++   +     +         + K+   +    L+     I+  L+   + N  K   
Sbjct: 61  ELETELKQLQAQLKTLIVRTTAIENKLNITRGDIDLETRLNIIAQELAAPPSANKNKQRN 120

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
             ++       ++   +  +F+  S+    +  V++  +   L +  + +IS+ G+TD  
Sbjct: 121 QYSSPVLTKADMVTLPSDILFESGSNKIRFDGRVIVDNLIRELRNYQDVIISVSGYTDNR 180

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333
                A+ N   S  +A    + L K      R+  I G+   R    +D       NRR
Sbjct: 181 ---GKAKVNLEKSFLQAEVIAEYLSKKLGQGYRLLAI-GYGESRPIAENDSQTNRQRNRR 236

Query: 334 IDILVEDRQ 342
           I++ V  R+
Sbjct: 237 IEVKVHLRK 245


>gi|294626797|ref|ZP_06705390.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598913|gb|EFF43057.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 419

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS      +++       +T + +S     +  MF        P+   V+ +I   
Sbjct: 278 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGVIAQIAAA 332

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +      + + GHTD  P R+   +DN+ LS  RA +  QVL     +  R+   +G   
Sbjct: 333 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEA-TGAGD 391

Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342
            +            + NRR++IL +  +
Sbjct: 392 SQPIAQPVQLPANRARNRRVEILFQPGE 419


>gi|114778503|ref|ZP_01453347.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
 gi|114551228|gb|EAU53787.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
          Length = 325

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 8/140 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +        +  +  +    GI        +   FD  S I   ++   + +I  +L +
Sbjct: 188 VVEVEPMQQEMVFIKAKDLANGITQQGHIALHQIHFDTDSDIIKADSRPAIDQIALMLKN 247

Query: 262 STEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
           + ++  I  GHTD        + N  LS  RA +    L    G+   R+    G  +  
Sbjct: 248 NPDLKIILVGHTDNQ---GDLQYNMDLSQRRAKAVMNSLESDYGIKRARLGAA-GIGYLA 303

Query: 320 LKIASDPM--NSANRRIDIL 337
              ++      + NRR++I+
Sbjct: 304 PIASNRSAEGRAENRRVEII 323


>gi|78224682|ref|YP_386429.1| OmpA/MotB [Geobacter metallireducens GS-15]
 gi|78195937|gb|ABB33704.1| OmpA/MotB [Geobacter metallireducens GS-15]
          Length = 194

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 9/173 (5%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           ++  +P  S +   A   K  ++D   K          D   +G       T     +  
Sbjct: 29  KDEMVPVASNKTAQAAVAKPAVKDGGIKTPPAKEVQSKDQSKEGAA---KGTMTEAQLQA 85

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 F+  SS+   E    L K  E+L  ++  + I G+ D          N  L   
Sbjct: 86  ALTKIFFNFDSSVLSSEGRETLVKNAELLKSASFKVRIEGNCDER---GSDEYNLALGER 142

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           RA +A + L+  GV  DR+S IS +   +       +   + NRR + +V  +
Sbjct: 143 RAQAAMKYLLTMGVPADRLSIIS-YGEEKPADPGHDEAAWAKNRRDEFVVMVK 194


>gi|311695186|gb|ADP98059.1| flagellar motor protein MotD [marine bacterium HP15]
          Length = 260

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 5/188 (2%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +  + S +  ++        +   E           +   M  + R + L       
Sbjct: 55  GVFNAPQRSFQPIEIGDQPQRSLNAPAENVIPPAVTEAPRNPEMDAQARTEALRAMADQL 114

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
                       V  ET+   + +++    N+ +F    + P  +   V++KI  VL + 
Sbjct: 115 SMEFDELINQGVVSLETSDQWLELNL---PNSLLFGSGDAEPHYDAFEVVEKIATVLNNR 171

Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              + + G TD  P        NW LS  RA +  ++L+  G+  +R++ + G+  ++  
Sbjct: 172 DNAVKVEGFTDNQPISTSRFPSNWELSAARAAAMVRMLVMEGIEPERLAAV-GYGQYQPV 230

Query: 322 IASDPMNS 329
             +D    
Sbjct: 231 SRNDTEEG 238



 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 62/135 (45%), Gaps = 1/135 (0%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++++    D  +N   W I YADF+T+L AFF+VM+ +++ ++   K + +         
Sbjct: 1   MRRRRQPQDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLTGVFNAP 60

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             + + I +  + P+RS     +  I   +T+   + ++ +  + +  + + + +    +
Sbjct: 61  QRSFQPI-EIGDQPQRSLNAPAENVIPPAVTEAPRNPEMDAQARTEALRAMADQLSMEFD 119

Query: 137 SQQSEHCKNSLTRDS 151
              ++   +  T D 
Sbjct: 120 ELINQGVVSLETSDQ 134


>gi|116620375|ref|YP_822531.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223537|gb|ABJ82246.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 237

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)

Query: 192 LQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           L D+ +K+   L        +   V F  T  G+ I +++      F   S  P      
Sbjct: 81  LLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEE 140

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA----RDNWRLSLDRAYSAYQVLMKSGVSE 306
           +L+ +   +      + I GHTDA PFRN        NW L+ DRA +A ++L   GV  
Sbjct: 141 LLRVLAREIGRLPNSLVIEGHTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRP 200

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +++ ++ GFA  +     D  ++ NRR+ ++V+
Sbjct: 201 EQVVEVRGFADQKPFNERDRFDARNRRVSVVVK 233



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          +        +  G+WK+ YADF+T LMA F+V+W++N++      +I  YF        T
Sbjct: 4  RFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVK-SSISGYFRDPRGFTRT 62

Query: 79 ASKGIFDEQNPPERSSQNKID 99
             G  +        +   +D
Sbjct: 63 LGAGPANSGEGLSLRTDGLLD 83


>gi|332881152|ref|ZP_08448812.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680901|gb|EGJ53838.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 920

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   +      +   L+ I  +L    +  I + G+TD +     A  N +LS  R
Sbjct: 812 DRTYFKTGNDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSAEGNLKLSERR 868

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341
           A S    L+  G ++ ++S   G+         +D     + NRRID+ +  +
Sbjct: 869 ANSVLNKLVALGANKAQLSA-QGYGAEHPICPANDTDECKAKNRRIDVRLTAK 920


>gi|300772840|ref|ZP_07082709.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759011|gb|EFK55838.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 655

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D        +   +L ++   L  +    I +  HTD+       + N +LS +R
Sbjct: 543 ENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATH---KYNMKLSQNR 599

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A +A   ++  G++ DRI    G+   RL          SD  + ANRR +I V +
Sbjct: 600 AQAAVDYIVSRGIARDRIVA-KGYGETRLVNKCADGVKCSDEEHQANRRTEIKVLE 654


>gi|124003926|ref|ZP_01688773.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123990505|gb|EAY29985.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 489

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 6/111 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+   +  +      L ++  VL    E+ + I+GHT          +N +LS DRA 
Sbjct: 381 VYFEYKKNYLINPAKAYLNQVVNVLKKYPEIELEIQGHTCD--ISQSEANNQQLSEDRAQ 438

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                L+K+G++  R++  +GF   +    +D       NRR+   V   +
Sbjct: 439 KVKAYLVKNGINAQRLTT-TGFGSKQPAFPNDDYYNRVRNRRVQFKVVKDK 488


>gi|24375803|ref|NP_719846.1| OmpA family protein [Shewanella oneidensis MR-1]
 gi|24350753|gb|AAN57290.1|AE015865_4 OmpA family protein [Shewanella oneidensis MR-1]
          Length = 201

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F  +S+   PE    ++++   L        +I GHT  +        N  LS 
Sbjct: 74  KEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRT---GTDETNKELSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   VL +  G+   R++ I G+   R  +      +   NRR+
Sbjct: 131 ERANAVTAVLAERFGIDRSRLTAI-GYGSSRPIVLEQTPEAEIRNRRV 177


>gi|289764553|ref|ZP_06523931.1| outer membrane porin F [Fusobacterium sp. D11]
 gi|289716108|gb|EFD80120.1| outer membrane porin F [Fusobacterium sp. D11]
          Length = 311

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 79/264 (29%), Gaps = 8/264 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N   +     +    DE    +R+                 VD +       ++ +    
Sbjct: 46  NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNKVSFQ 105

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +   + E    ++T + +          +E + +    Y     +       K K
Sbjct: 106 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 165

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
            ++    K        L        +        I  +  +I   +  +FD       PE
Sbjct: 166 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 225

Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              VL+ +  VL  +  +   I GHTD+       + N  LS +RA +    L   G++ 
Sbjct: 226 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 282

Query: 307 DRISKISGFAHHRLKIASDPMNSA 330
           +    I G+   R   ++D     
Sbjct: 283 E--ITIKGYGKTRPIASNDTPEGK 304


>gi|157736518|ref|YP_001489201.1| OmpA domain-containing protein [Arcobacter butzleri RM4018]
 gi|315635678|ref|ZP_07890941.1| OmpA domain protein [Arcobacter butzleri JV22]
 gi|157698372|gb|ABV66532.1| OmpA domain protein [Arcobacter butzleri RM4018]
 gi|315479975|gb|EFU70645.1| OmpA domain protein [Arcobacter butzleri JV22]
          Length = 241

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 189 KKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            K+ Q++A+ +++ ++      +   + ++   T   + I   D     MF+ +S+ P  
Sbjct: 83  DKQAQEVAQSLNTNVNNNPQAVLDPNQDLIVSNTDNYVKIMFRDSM---MFETNSANPTY 139

Query: 247 ETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                + KI  VL       + + GHTD+         N  LS  RA +   ++  SGVS
Sbjct: 140 SAQTKISKIYSVLQKYPNTLVQVVGHTDSR---GTHTYNQTLSEQRATNVGNIIYNSGVS 196

Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            ++I    G +  +    ++  +  + NRR+++ +   Q
Sbjct: 197 -NQIFS-RGCSFDKPVALNNSESNMALNRRVEVYLYPNQ 233


>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
          Length = 347

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 219 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 275

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  ++IS   G             +    +A       +RR++I 
Sbjct: 276 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARAALIDCLGPDRRVEIE 334

Query: 338 VED 340
           V+ 
Sbjct: 335 VKG 337


>gi|326402347|ref|YP_004282428.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
 gi|325049208|dbj|BAJ79546.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
          Length = 361

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+   +   P    ++ +  +    +    +++ G+TD          N +LSL RA+
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 314

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    L+  GVS++ I  I G+    L + + P      NRR++I++
Sbjct: 315 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 360


>gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 657

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     +D   +   P+  + L K+ ++L  +    I +  HTDA         N RLS 
Sbjct: 542 RLENIYYDLDKADIRPDAAIELDKLVQILKDNPGLKIELGSHTDAR---ASEIYNLRLSQ 598

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILV 338
            RA SA   ++  G+S +R+    G+    L I +   +  +  NRR +  V
Sbjct: 599 RRAESAINYIVNKGISRERLEA-RGYGESELIIPNAKTEAEHQQNRRTEFKV 649


>gi|288958638|ref|YP_003448979.1| ompA-family protein [Azospirillum sp. B510]
 gi|288910946|dbj|BAI72435.1| ompA-family protein [Azospirillum sp. B510]
          Length = 502

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295
           F   S    P  + + + + E L      IS+ G+TD+   R+     N  LS  RA+  
Sbjct: 391 FASGSDRIEPRYVELFRHVAEALRPEQGRISVIGNTDSVAIRSTRYRSNQELSEARAFRV 450

Query: 296 YQVLMK-SGVSEDR----ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            +++    G    R         G         +        NRR+DI++
Sbjct: 451 QRLMTDILGKDAGRDGGSRLSAEGRGDGDPIAPNTTAEGRQANRRVDIVL 500


>gi|254448733|ref|ZP_05062191.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
 gi|198261741|gb|EDY86028.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
          Length = 207

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
            +    F   S     E   VL    + LA + +V   + GHTD          N  LS 
Sbjct: 94  SKRMVFFAFDSDQVKEEFNDVLIAHAKYLASNPDVSVRLEGHTDER---GTREYNLALSE 150

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  Q LM  G   + ++ + GF               + NRR +++
Sbjct: 151 RRAKAVRQFLMLYGAPAESVN-VYGFGEELPLALGSTEEAYAENRRAELV 199


>gi|148259194|ref|YP_001233321.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146400875|gb|ABQ29402.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
          Length = 361

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+   +   P    ++ +  +    +    +++ G+TD          N +LSL RA+
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 314

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    L+  GVS++ I  I G+    L + + P      NRR++I++
Sbjct: 315 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 360


>gi|148259193|ref|YP_001233320.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|326402346|ref|YP_004282427.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
 gi|146400874|gb|ABQ29401.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
 gi|325049207|dbj|BAJ79545.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
          Length = 364

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+   +   P    ++ +  +    +    +++ G+TD          N +LSL RA+
Sbjct: 261 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 317

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +    L+  GVS++ I  I G+    L + + P      NRR++I++
Sbjct: 318 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 363


>gi|224534343|ref|ZP_03674921.1| flagellar motor apparatus [Borrelia spielmanii A14S]
 gi|224514445|gb|EEF84761.1| flagellar motor apparatus [Borrelia spielmanii A14S]
          Length = 260

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIMVRMEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      + NW LS+ R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSVARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V+  +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 NVTSVENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RTKKPLKCDEGAPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|13472168|ref|NP_103735.1| hypothetical protein mll2374 [Mesorhizobium loti MAFF303099]
 gi|14022913|dbj|BAB49521.1| mll2374 [Mesorhizobium loti MAFF303099]
          Length = 366

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
             +++ +     F  +S+    ++  +L ++  V+       + + G+TD+         
Sbjct: 249 RFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSD---GSPEA 305

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           N  LS  RA +  + L+  GV   +IS   G        A+D     + NRRI+ 
Sbjct: 306 NKALSERRAQAVAEALVAGGVPRQQISAA-GHGEENPVAANDTPKNKALNRRIEF 359


>gi|294651528|ref|ZP_06728837.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292822551|gb|EFF81445.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 160

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + S   PE    + ++ + L     + + I GHTD          N +LS +
Sbjct: 53  PERLLFDFNKSDIKPEHANEIARLAKQLNKYDLQKLKIVGHTDDV---GNPEYNQKLSEE 109

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S   + +  G  ++ +  + G    +  + +      ++NRR+ +++
Sbjct: 110 RAQSVSMIFVNEGFKQNNL-TVIGRGSSQPYLPNTSEENRASNRRVAVII 158


>gi|82523863|emb|CAI78811.1| outer membrane protein and related peptidoglycan-associated
           [uncultured candidate division WS3 bacterium]
          Length = 192

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 15/176 (8%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +         P    +    M     L      + S       D++ K          + 
Sbjct: 18  AAVGCGKKPEPATDLDMAARMSSADSLDASDTDLESAEGLSRFDDLFKKKPAAEEIETVE 77

Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
                + ++D  +   F+        +   +L +  + +    E  I I GH D+     
Sbjct: 78  TKPAPVLVMDDIH---FEFDKYTLTADARRMLAQTAKAMKEMPEVRIQIEGHCDSR---G 131

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
               N  L   RA +A   L+  G+   R+S IS F   R      ++   + NRR
Sbjct: 132 TQEYNLALGQRRAQAAKDYLVNLGIDAARVSIIS-FGEERPLDPRENEEAWAKNRR 186


>gi|83941258|ref|ZP_00953720.1| OmpA family protein [Sulfitobacter sp. EE-36]
 gi|83847078|gb|EAP84953.1| OmpA family protein [Sulfitobacter sp. EE-36]
          Length = 191

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISST-----------LSGLVADNIVKGVLFETTRTGILI 226
           L      A  R ++ +D  + I +            +       +   V  +        
Sbjct: 23  LQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQGIPVCRRG 82

Query: 227 SIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++    N    F+  S    P+    L +  +     +    I GHTD+         N 
Sbjct: 83  NVCGVMNTDQFFNTDSYRVHPQGRARLAEFFKTTGAVS--YIISGHTDSR---ASDAYNM 137

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           +LSL+RA +   +  +SG    RI+ + G+       ++      + NRR++I+
Sbjct: 138 KLSLNRANAVASIAQQSG---ARIADVRGYGERMPAASNGTAGGMAKNRRVEII 188


>gi|120435916|ref|YP_861602.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578066|emb|CAL66535.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 281

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 79/210 (37%), Gaps = 13/210 (6%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              +  +   + K   L    +    +N          +K K    K        AK + 
Sbjct: 53  ARIEERVADYNAKINSLRTENEGMMEMNDLTVMSKNTKNKMKNTIAKMDPEKVKGAKTLE 112

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ------RNTPMFDKSSSIPLPETIVVLQK 254
            +++  V+ N+ + +        I IS+ +        +  +F   S     E   +L+K
Sbjct: 113 DSINLAVSYNLKQNISEGADEDDIDISVDETVVMINVSDKLLFGSGSYRVTGEAQPLLKK 172

Query: 255 IGEVLA-HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           + EV+       + I GHTD       +   DNW LS+ RA S  +VL  K  V   ++ 
Sbjct: 173 LAEVINSEPAMEVMIEGHTDDRTMVTESYLKDNWDLSVRRATSIVRVLQDKYNVEPSKLI 232

Query: 311 KISGFAHHRLKI--ASDPMNSANRRIDILV 338
              G + ++  +  ++    + NRR  I++
Sbjct: 233 AA-GRSSYQPLVENSNKDNMAKNRRTRIVI 261


>gi|222149664|ref|YP_002550621.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
 gi|221736646|gb|ACM37609.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
          Length = 177

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +  + L   ++  I++ GH D          N  L   R
Sbjct: 68  DRIFFDTDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333
           A S    L+  G+  +RI  IS +   R     D     S NRR
Sbjct: 125 AASTKAYLVSRGIPANRIKTIS-YGKERPVATCDDISCWSQNRR 167


>gi|313201413|ref|YP_004040071.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
 gi|312440729|gb|ADQ84835.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
          Length = 356

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 17/122 (13%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288
           ++  +F         E   VL   + E +    EV  + I GHTD          N +LS
Sbjct: 236 QSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRI---GDEAYNQKLS 292

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILV 338
             RA +  + L+  G+   R+  + G       +    +           NRR  ++I V
Sbjct: 293 ERRANAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEIEV 351

Query: 339 ED 340
           + 
Sbjct: 352 QR 353


>gi|312130358|ref|YP_003997698.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906904|gb|ADQ17345.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 444

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S    PE+  V+++I  VL  ++ +   I GHTD+       + N  LS  RA S 
Sbjct: 342 FDVNSDKIKPESYGVIKEIATVLQENSGIRVKIVGHTDSD---GDDKSNLTLSQKRAASV 398

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L     +  +R+    G         +        NRR++ +
Sbjct: 399 KNFLTSEFKIDAERLET-EGKGESEPSEPNTTPQGKANNRRVEFI 442


>gi|332664792|ref|YP_004447580.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333606|gb|AEE50707.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 256

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 7/212 (3%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              +  +     +  +    ++  DL    + EK+    E   L          +   ++
Sbjct: 32  SKEAADKALAETQTKVANLEKENTDLKTQLEAEKTRLNGEIANLRKDLDATKGQISAVQQ 91

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIV 250
             D+++   + +   V            T       +    + PM +   S         
Sbjct: 92  KLDMSQAELTKVKNEVNGIFSAYKSSGLTAEERDGRLYLMTSAPMDYKTGSYALSKAQRE 151

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSED 307
            + ++   L  + +  I + GHTD+   R  A    NW LS  R+ +  + L+K+GVS  
Sbjct: 152 AVAQLATTLKSNPKLKILVEGHTDSDKVRGGAAYQDNWELSSKRSLAICRELIKNGVSPA 211

Query: 308 RISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           +++ + G      K  +      +ANRR D++
Sbjct: 212 QVATV-GRGETMPKADNSTKEGKAANRRSDVV 242


>gi|166714357|gb|ABY87945.1| outer membrane protein [Acinetobacter sp. bm-8]
          Length = 355

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 8/127 (6%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
                +I  ++      FD + S    +    + K+ E L         I GHTD +   
Sbjct: 221 QEPQEVIEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLNEYPNATARIEGHTDNT--- 277

Query: 279 NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              + N RLSL RA S    L+ +  +   R+    GFA  +    ++       NRR+ 
Sbjct: 278 GPRKLNERLSLARANSVKSALVSEYNIDSSRL-AAQGFAWDQPIADNNTKEGRAMNRRVF 336

Query: 336 ILVEDRQ 342
             +   +
Sbjct: 337 ATITGSR 343


>gi|225164037|ref|ZP_03726322.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
 gi|224801343|gb|EEG19654.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
          Length = 253

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 4/179 (2%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
                K       P +          + L  LA+++   L+ L        +  + T  G
Sbjct: 67  RPETGKSSGEKDNPGTGLTDQKAVDLEYLNKLARELYRLLN-LDESRTDNPIDIQVTSDG 125

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA---SPFRNI 280
           + + + D+   P+F    +        V+  +  ++      ++I GHT A      R  
Sbjct: 126 LRVILYDRNGRPLFVDRGTELTEWGRFVMDNLAWLIDRDHFYVTIEGHTRAGLTLDDRPS 185

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +   W LS DRA ++ + L +  VS   I ++ G+A  R  + +D  + +N+R+ + + 
Sbjct: 186 SYTLWELSADRANASRRALTEHVVSPALIERVVGYADTRPLLDTDATSESNQRVTLSLR 244



 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
            G+WK+ YADF+T +MA F+V+W I+A D     +  +YF    K L+ A+ G+   +  
Sbjct: 8   SGAWKVAYADFVTAMMALFMVLW-ISAQDHQILISTARYFQAPTKPLLNAAAGVMPMEKF 66

Query: 90  PERSSQNKIDLS 101
              + ++  +  
Sbjct: 67  RPETGKSSGEKD 78


>gi|254460338|ref|ZP_05073754.1| OmpA domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206676927|gb|EDZ41414.1| OmpA domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 594

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 84/316 (26%), Gaps = 20/316 (6%)

Query: 35  IVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FGKNLMTASKGIFDEQNPPE 91
           + +AD  +T        +     TD      +             +     +  + +   
Sbjct: 258 VTFADADIT--------LVADEGTDQSLFDRVVGELETGLPEVFALETVLPVIPDASQGP 309

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                 +       +        +  T       R  +   Y ++       ++   R  
Sbjct: 310 PEFIATLSPEGQVQLRGRVNSKLVRDTADSYAKARFGSGEVYTASRIDESLPRDWSVRVL 369

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
              + L    +   ++  E+             +   +  L+ L      ++       +
Sbjct: 370 AAIETLSMLKNGSVTVTPEKVRVFGDTGVPSAKSDITRLLLEKLGDSKDLSIEVTYKKKL 429

Query: 212 VKGVLFETTRTG-ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--I 268
              +   T     + ++ I       F+  S         +L  + E+L    + +   I
Sbjct: 430 DPVLGLPTADECEVQVTEIQSGRKITFEPGSGNLDASAESILDDMAEILIKCPDDMRMEI 489

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G+TD+         N  LS  RA +    L +  V   R     G+        +    
Sbjct: 490 SGYTDSQ---GREVMNQELSQTRAQAVLTALRERRVLMSRYVA-KGYGEENPIGDNSTEA 545

Query: 329 SA--NRRIDILVEDRQ 342
               NRRI+  +   +
Sbjct: 546 GREANRRIEFKLIRPE 561


>gi|270263877|ref|ZP_06192145.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
 gi|270042070|gb|EFA15166.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
          Length = 165

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     PE+   +QK+G  L         + GHTD          N +LSL R
Sbjct: 59  DKVLFGNNIGKLNPESTETVQKMGRALMSVGITKFRLDGHTDNY---GEDSYNDQLSLRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A +   +L   G+    I    G         +      + NRR+ I+V 
Sbjct: 116 ANAVADLLASVGIPRANIET-RGMGKRDPVADNRTSSGRAENRRVAIVVT 164


>gi|253999390|ref|YP_003051453.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
 gi|253986069|gb|ACT50926.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
          Length = 356

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 17/122 (13%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288
           ++  +F         E   VL   + E +    EV  + I GHTD          N +LS
Sbjct: 236 QSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRI---GDEAYNQKLS 292

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILV 338
             RA +  + L+  G+   R+  + G       +    +           NRR  ++I V
Sbjct: 293 ERRANAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEIEV 351

Query: 339 ED 340
           + 
Sbjct: 352 QR 353


>gi|315187219|gb|EFU20976.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
          Length = 430

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    ++ LP     L  + E L  + +    + GHT         +    LS+ RA + 
Sbjct: 327 FLPDQAVLLPGEEAKLDILAEALKKAPDRTILVVGHTADV---GKPQGQMALSVARAKTI 383

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L+K G+  DR+  + G         +        NRR++I + + 
Sbjct: 384 VEELVKRGIEPDRLIYL-GKGGTEPVAPNHTEEGRRLNRRVEIFLLED 430


>gi|242277549|ref|YP_002989678.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242120443|gb|ACS78139.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 172

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+    +   V+  +G  L           + GHTD+      +  N  LSL RA 
Sbjct: 49  FKVNSAKISEKANPVVDSLGVALTSGPGQSMQVRLVGHTDS---AGKSEYNRSLSLKRAE 105

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
           S    L +   +   RI ++ G    +   +++     + NRR++++
Sbjct: 106 SVRNYLAVHFNIDPARI-EVQGMGEDQPIASNENAQGRAQNRRVEVI 151


>gi|126736947|ref|ZP_01752682.1| OmpA family protein [Roseobacter sp. SK209-2-6]
 gi|126721532|gb|EBA18235.1| OmpA family protein [Roseobacter sp. SK209-2-6]
          Length = 187

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +        +I         F              L++  +   
Sbjct: 54  AMDDGAEGYMTPHVTRDGKPVCRRGNICGVMPTDQFFATDRHAINAAGQQRLKEFFQ--K 111

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +     I GHTD+         N RLS  RA +  +V    G    RI ++ G+     
Sbjct: 112 ANARAFIISGHTDSR---ASDEYNMRLSERRANAVARVGNSIG---ARIIEVRGYGERDP 165

Query: 321 KIASDPMN--SANRRIDIL 337
           +  ++     + NRR++I+
Sbjct: 166 RKPNNSAANMAENRRVEII 184


>gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
 gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
          Length = 347

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                  E    LQ + + L       + + G+T  +        N +LS  RA +   +
Sbjct: 227 DGKHLTQEDKQRLQPMIQRLTRYPSATVEVTGYTSNT---GSVAYNQKLSEKRAKNVADL 283

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           L +      +I+   G         +D     + NRR++I 
Sbjct: 284 LSQYVADASQITA-KGMGEANPIATNDTAKGRAENRRVEIY 323


>gi|203287740|ref|YP_002222755.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
 gi|201084960|gb|ACH94534.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
          Length = 262

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 18/167 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245
            K  Q      + ++   V       V+      G+++S++       FD +S+      
Sbjct: 89  AKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLAD---AFFDSASAEVKLDD 145

Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             + I  +      L +      I GHTD        I + NW LS  RA +  + ++  
Sbjct: 146 NRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205

Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
                +I        +SGFA  R     D       NRRIDIL+   
Sbjct: 206 -TDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251


>gi|312129756|ref|YP_003997096.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906302|gb|ADQ16743.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 800

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 90/292 (30%), Gaps = 12/292 (4%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           +   + T + I+ Y                ++Q P   +        +         + +
Sbjct: 514 SGLQEYTFQFIDDYTKEKIVVKSLFVNNAANKQVPLNSTEDGFKATFLPNAALDLKFEAE 573

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSE-HCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
              T   K        +    ++         SLT +      +  +    K+I      
Sbjct: 574 GYETKSLKVAAFNGEPLALRKSTYPLALKFTPSLTEEQSNKAKIVITQGKSKTIKGTWED 633

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +  L  +    +  +  +      I S     VA       L         +     ++
Sbjct: 634 GVYHLLTDPAQLLDMEINVPGYHPYIGSLNRSQVAQMEANITLTPLPTAPEKMEAKVGKS 693

Query: 234 TPM----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             +    F++S +  LP +   L ++ + +       I I GHT+        R N RLS
Sbjct: 694 YVLTGVNFEQSQTTMLPGSEDKLAEVLQFMKDHPNVKIEIIGHTEK---AGDERQNVRLS 750

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             RA +    L   G++  RI+   G         +D   + NRRI++ V +
Sbjct: 751 EFRARTVANWLFNKGIASSRITTA-GKGSAEPIDPND--AAVNRRIEVKVVE 799


>gi|312882154|ref|ZP_07741903.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370200|gb|EFP97703.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 215

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    S         L ++ E L +    I+I GHTD    +     N  L L RA +A 
Sbjct: 106 FGFDQSNLTAMGRDALSQLAESLKNEDSAIAIEGHTDN---KGSEGYNQALGLRRALAAS 162

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
             L+  GV  +RI  +  +  +     +      + NRR +I   +R 
Sbjct: 163 GALLTEGVDANRIV-VRSYGENLPIATNSTEEGRAQNRRSEIKTSERN 209


>gi|163732848|ref|ZP_02140293.1| OmpA domain protein [Roseobacter litoralis Och 149]
 gi|161394208|gb|EDQ18532.1| OmpA domain protein [Roseobacter litoralis Och 149]
          Length = 176

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+      +  + +I +VL    +  + ++GHTD+         N  LS  RA S 
Sbjct: 48  FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQ---GREEMNRSLSQARAQSV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L    V         G+        +D       NRRI+  +   +
Sbjct: 105 LNELRARKVLTSNFIA-KGYGEANPIADNDTEEGREANRRIEFKLIRPE 152


>gi|269302570|gb|ACZ32670.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
           LPCoLN]
          Length = 192

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S      E + +L  +   +  + +  + I GHTD       A  N  L   RA +
Sbjct: 88  FATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDER---GAASYNLALGARRANA 144

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
             + L K G+S DR+  IS +       +  ++     NRR +  +  R
Sbjct: 145 IKEHLRKQGISADRLPTIS-YGKEHPLNSGHNELAWQQNRRTEFKIHAR 192


>gi|171463937|ref|YP_001798050.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193475|gb|ACB44436.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 188

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           ++D + S   PE    L KI   L      + I  G+TD+         N  L   RA S
Sbjct: 81  LYDFNKSDLKPEGKATLDKIAADLKKIKLEVIITVGNTDSV---GTDAYNMALGQRRAQS 137

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
               L+   V   RI             ++      + NRR DI V
Sbjct: 138 VKTYLVSKDVDGSRIYT-ESKGKSNPVASNATAEGRAKNRRTDIEV 182


>gi|86141821|ref|ZP_01060345.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85831384|gb|EAQ49840.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 653

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 54/162 (33%), Gaps = 18/162 (11%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIP 244
           R  +     S +L         + V          I+  D     +      FD      
Sbjct: 493 RADEPEYYSSESLITTPKGGGDQVVDLYLEPRITKINEGDDLADLLKLKPIYFDFDRFNI 552

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
            P+    L K+  V+  +   V+ IR HTD+         N  LS  RA S    ++  G
Sbjct: 553 RPDAAEELTKVLAVMESNPSLVVEIRSHTDSR---GNDAYNLSLSDKRAKSTADWIVNRG 609

Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           +   RI    GF   +L          ++  +  NRR + +V
Sbjct: 610 IEPSRI-SGEGFGETQLINDCGNGADCTEEQHQLNRRSEFIV 650


>gi|311697262|gb|ADQ00134.1| outer membrane protein OprF [marine bacterium HP15]
          Length = 374

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E    + +I   +L ++  VI I GH DA      +  N RLS  RA S 
Sbjct: 269 FPLDSASIPAEFDSEIDRIAALILENTGTVIEIAGHADA---SGDSVYNQRLSQRRAESV 325

Query: 296 YQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+    +  DRI  + G+   +    ++       NRR++  V+
Sbjct: 326 ASALISRNATIADRIKAV-GYGETQPIATNETAQGREMNRRVEARVQ 371


>gi|262373123|ref|ZP_06066402.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
 gi|262313148|gb|EEY94233.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
          Length = 188

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 80  FDYDSSDLSNEDYQTLQAHAQFLVANANSRVALTGHTDER---GTREYNMALGERRAKAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +       A  ++     NRR++I
Sbjct: 137 ESFLITNGVNPQQLEAVS-YGKEAPVNAGHNEAAWKENRRVEI 178


>gi|226953967|ref|ZP_03824431.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
 gi|226835321|gb|EEH67704.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
          Length = 159

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD + S   PE    + ++ + L     + + I GHTD          N +LS +
Sbjct: 52  PERLLFDFNKSDIKPEHATEIARLAKQLNKYDLQKLKIVGHTDDV---GNPEYNQKLSEE 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S   + +  G  ++ +  + G    +  + +      ++NRR+ +++
Sbjct: 109 RAQSVSMIFVNEGFKQNNL-TVIGRGSSQPYLPNTSEENRASNRRVAVII 157


>gi|157165686|ref|YP_001466588.1| OmpA family protein [Campylobacter concisus 13826]
          Length = 219

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 11/178 (6%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +    +          +    K +K  Q+        ++ L+  +    +  E +  G +
Sbjct: 24  ARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITMEESEDGFI 83

Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR--NI 280
           + +       +FDK S+     +  + L++IG ++A         I G+TD +     +I
Sbjct: 84  VRLPAAM---LFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNPSKDSI 140

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++NW+LS  RA S  + L+  GV ++R+   SG A      ++      + N R++I
Sbjct: 141 YKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNRVEI 197


>gi|317127982|ref|YP_004094264.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
 gi|315472930|gb|ADU29533.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
          Length = 484

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSL 289
            +  +FD   S    E   V++++   L    +   I   GHTD          N+ LS 
Sbjct: 372 PDDILFDFDQSSLKEEAKEVIKEVLPALDSLKDGTIIEIRGHTDNE---GDPDYNYILSE 428

Query: 290 DRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           +RA S Y  +  SG S D I  ++  F       +++       NRR++++++ R
Sbjct: 429 ERAESVYNFVRNSGESLDHIEFRVKAFGETAPIASNEDEEGRERNRRVELVIDPR 483


>gi|124007750|ref|ZP_01692453.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123986872|gb|EAY26644.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 274

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     F   S     ++  +L  + + +    E  I + GHT           N RLS 
Sbjct: 162 EDGAFRFKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNI---GTKAGNLRLSK 218

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334
            RA +  + LM+  G+   RI    G+A +R  +   ++P    NRR+
Sbjct: 219 KRAEAVRKYLMEYDGIDPKRIKTA-GYADNRPLVPNINEPNRKKNRRV 265


>gi|194366890|ref|YP_002029500.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349694|gb|ACF52817.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
           R551-3]
          Length = 172

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++GHTD          N  L  
Sbjct: 63  RQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDER---GSRAYNQALGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R       L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 120 RRGNGVNSALQANGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168


>gi|262168510|ref|ZP_06036206.1| protein F-related protein [Vibrio cholerae RC27]
 gi|262023039|gb|EEY41744.1| protein F-related protein [Vibrio cholerae RC27]
          Length = 204

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMSNAMTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|190575561|ref|YP_001973406.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
           maltophilia K279a]
 gi|254523725|ref|ZP_05135780.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
 gi|190013483|emb|CAQ47118.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
           maltophilia K279a]
 gi|219721316|gb|EED39841.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
          Length = 172

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++GHTD          N  L  
Sbjct: 63  RQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDER---GSRAYNQALGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R       L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 120 RRGNGVNSALQANGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168


>gi|150005847|ref|YP_001300591.1| OmpA family outer membrane protein [Bacteroides vulgatus ATCC 8482]
 gi|149934271|gb|ABR40969.1| outer membrane protein, OmpA family [Bacteroides vulgatus ATCC
           8482]
          Length = 239

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+             +            + +       +F+  ++    +    L K  
Sbjct: 74  KKMDKAAEEAAQIQGAQVEQVTDNNGLQAVKVTFDSG-ILFNTGNAALSAQAKSALSKFA 132

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   +RN   +     N  LS +RA S    L+  GVS  +I
Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQI 192

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G         +D       NRR+++ +   Q
Sbjct: 193 KSVEGLGQADPIGNNDTAEGRQQNRRVEVYMYASQ 227


>gi|326794907|ref|YP_004312727.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326545671|gb|ADZ90891.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 209

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD    I  P     ++K+ + +  + +   +  GHTD          N  LS  RA
Sbjct: 79  NILFDSGKDIVKPRYYSEVKKLADFMRKNPQSSIVIEGHTDDV---GSEELNLGLSQRRA 135

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            +   VL  S  V + R+  + G+   R    +D       NRR+   +  RQ
Sbjct: 136 SAIASVLTDSFMVRKSRVKGV-GYGETRPIATNDTATGREQNRRVVAEIFARQ 187


>gi|284034989|ref|YP_003384919.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283814282|gb|ADB36120.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 432

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 83/255 (32%), Gaps = 13/255 (5%)

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P +++   +        +     D+    T   K        +  +S        K  +T
Sbjct: 187 PKKQTPLPQPSGESGGEMETPRTDVPKKETL--KPAPAPVPTLVSVSGIVSDAKSKRPVT 244

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              +      K              +   L+K ++       R    A  +         
Sbjct: 245 ATIDYQLSSSKQAIDSVQSFASTGAYRMSLNKGQVYTYIASARGYQSASGVLDLSKVAGG 304

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
             + + +       G  +++        F+ S S  L  +   L K+  ++  +  + I 
Sbjct: 305 QKLTRDIALTPLAVGDKVTL----KNIYFEMSKSNLLSASFAELNKLVSMMQDNPNMSIR 360

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SD 325
           + GHTD          N +LS DR  +  + L++ G+  DRI  I G+   R  +   +D
Sbjct: 361 LEGHTD---IIGDHDKNLQLSRDRVIACQRYLVQQGIDIDRIQTI-GYGDTRPILTKGTD 416

Query: 326 PMNSANRRIDILVED 340
                NRR++ ++  
Sbjct: 417 EERKVNRRVEFVILA 431


>gi|167623118|ref|YP_001673412.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353140|gb|ABZ75753.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 199

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ + +  L      L+ I   L  +   + + GHTD+         N +LS +RA    
Sbjct: 96  FEFARADVLLSQAQTLEVIARWLKSTGGDLLLVGHTDSV---GSPAYNLQLSFERAEQVK 152

Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            VL++  G+   R  ++ G         +        NRR++ LV
Sbjct: 153 NVLVEQFGLLASRF-QVVGVGSAEPIADNRTRQGREQNRRVEFLV 196


>gi|319763880|ref|YP_004127817.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|330823856|ref|YP_004387159.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|317118441|gb|ADV00930.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
 gi|329309228|gb|AEB83643.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 171

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD +S     E   +L ++G  L       + + GH D          N RLSL R
Sbjct: 64  GKLLFDFNSDAMTGERREMLVRMGHALVGVGVRALRVEGHADDQ---GSPDYNERLSLRR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           A +  QVL ++G+  +RI  I G+   R  +   S+     NRR+ ++V
Sbjct: 121 AQAVAQVLAEAGIPRERID-IRGYGASRPLVIGTSEAARQENRRVALIV 168


>gi|167035658|ref|YP_001670889.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166862146|gb|ABZ00554.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 163

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GH DA      A  N +L
Sbjct: 52  YDLSGKVLFGSDLDSLNGQSQSIVERIGKALLSVGIQGVRVDGHADA---SGKAAYNQQL 108

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V
Sbjct: 109 SERRAQSVTKALVGVGMQPQNIQS-RGLGSTQPVADNRTSAGRTENRRVSIVV 160


>gi|186477828|ref|YP_001859298.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184194287|gb|ACC72252.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 242

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +    F   S+   P     L            + ++I G+TD++     A  N RLS  
Sbjct: 134 QGDATFAVGSATLTPFATAKLDDFVAANQGVDVDRLTIAGYTDST---GSAELNNRLSAA 190

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RA S    L  +G+       + G+        +      + NRR++I V+ +
Sbjct: 191 RARSVQGYLATAGLRASA-WDVQGYGSASPVAPNKTAIGRAKNRRVEIQVDGK 242


>gi|225011622|ref|ZP_03702060.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225004125|gb|EEG42097.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 468

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 22/269 (8%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P  K+      G+ +    P+    + ID +         V+               E+ 
Sbjct: 214 PDKKDECPEVPGLKEYNGCPDTDGDSVIDKNDICPEVAGKVEFNGCPDTDGDGVSDPEDA 273

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
              ++ S + + C      D +   D   S   E           P    + +       
Sbjct: 274 CIDIAGSIEMKGCP---DTDGDGISDATDSCINEIGPLDNNGCPWPDADNDGVADK---- 326

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
              DL K    ++S      +   V+      G  I+     +  +             +
Sbjct: 327 --DDLCKDEVGSISNNGCPKLSNEVMKTINEFGAKINFAASSDKILG-------KKMFDI 377

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           + +    ++ +    + I G+  A         N  LS+ RA +    L K G++ +R+ 
Sbjct: 378 LYKIKDILIENPVGNLLIEGYASAD---GSEEYNIELSVKRAEAVRDFLNKIGINIERL- 433

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDIL 337
           ++ G   +     ++     + NRR+  +
Sbjct: 434 EVRGLGVNSPVGNNESPEGRAENRRVQFI 462


>gi|319407719|emb|CBI81367.1| Outer membrane lipoprotein omp16 homolog [Bartonella sp. 1-1C]
          Length = 168

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS    +   +L +  E L       I+I GH D          N  L   R
Sbjct: 58  DRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADER---GTREYNLALGQRR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           A +    L+  GVS  R++ IS +   R      +    + NRR  ++V +
Sbjct: 115 AVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVVNN 164


>gi|319793387|ref|YP_004155027.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
 gi|315595850|gb|ADU36916.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
          Length = 172

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               FD  S    PE   ++      L  + +    I GHTD          N  L   R
Sbjct: 66  RIVYFDYDSYTVKPEFQSIVDGHARFLKSAPQRRISIEGHTDER---GGREYNLALGQKR 122

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           A +  + L   GV++ +I  +S F   +  +    +   + NRR +I
Sbjct: 123 AEAVRRALTLLGVNDSQIEAVS-FGKEKPAVQGGGEEAWAQNRRAEI 168


>gi|282853319|ref|ZP_06262656.1| OmpA family protein [Propionibacterium acnes J139]
 gi|282582772|gb|EFB88152.1| OmpA family protein [Propionibacterium acnes J139]
 gi|314922410|gb|EFS86241.1| OmpA family protein [Propionibacterium acnes HL001PA1]
 gi|314965447|gb|EFT09546.1| OmpA family protein [Propionibacterium acnes HL082PA2]
 gi|314982607|gb|EFT26699.1| OmpA family protein [Propionibacterium acnes HL110PA3]
 gi|315091130|gb|EFT63106.1| OmpA family protein [Propionibacterium acnes HL110PA4]
 gi|315094263|gb|EFT66239.1| OmpA family protein [Propionibacterium acnes HL060PA1]
 gi|327329241|gb|EGE71001.1| putative outer membrane protein A [Propionibacterium acnes
           HL103PA1]
          Length = 363

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD       A  N  L
Sbjct: 252 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDN---SGSASHNLDL 308

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 309 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVASNDSEAGRCLNRRVTITVKE 362


>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
 gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
          Length = 358

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|255263976|ref|ZP_05343318.1| OmpA family protein [Thalassiobium sp. R2A62]
 gi|255106311|gb|EET48985.1| OmpA family protein [Thalassiobium sp. R2A62]
          Length = 189

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   S          L       +       + GHTD+         N RLS +RA S 
Sbjct: 91  LFQTDSYHINNAGKQALMNFFR--SSGASAYIVTGHTDSR---ASDAYNMRLSQNRANSV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +V    G    RI  + G+   + +  +      + NRR++I+
Sbjct: 146 ARVGQSVG---ARIVDVRGYGERQPRADNHSHQGMAQNRRVEII 186


>gi|42527651|ref|NP_972749.1| OmpA family protein [Treponema denticola ATCC 35405]
 gi|41818479|gb|AAS12668.1| OmpA family protein [Treponema denticola ATCC 35405]
          Length = 449

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 12/143 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +  L+  +  KG+     +  + I + D R    F       LPE +  +  I E L  
Sbjct: 314 DIELLLEKHKEKGIELSNPKNIVKIIMYDIR----FVADMPDVLPEEMGKIDVIAEALLK 369

Query: 262 --STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                   I GHT      N   D   LS+ RA      + K G+   RI    G+   R
Sbjct: 370 LGPYTKFLIEGHTADL---NRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTR 425

Query: 320 LKIA--SDPMNSANRRIDILVED 340
                 ++   + NRR++I V  
Sbjct: 426 PVAPSNNETNMAKNRRVEITVIR 448


>gi|228018085|gb|ACP52721.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|294139825|ref|YP_003555803.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293326294|dbj|BAJ01025.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 210

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           I     T  F+ + +        VL +I + L  +   + + GHTD+         N RL
Sbjct: 97  IEADDLTLNFEFAKAEVSYSQWQVLAQIKQFLQLNDVDLCLIGHTDSI---GNLEANQRL 153

Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           S  RA S  ++L++  G    R   + G         +D       NRR++ LVE
Sbjct: 154 SEARAKSVMRILVEDYGFEPGRFI-VRGMGTRSPIGTNDTPGGRTLNRRVNFLVE 207


>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
 gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
          Length = 355

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 227 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDSYNQGLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +      P  +       +RR++I 
Sbjct: 284 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|239818113|ref|YP_002947023.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239804690|gb|ACS21757.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 187

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            N   FD   +        VL K+ E L  +    + + GHTD +        N RLS+ 
Sbjct: 78  PNELSFDVGRANVKRNLAQVLDKVAEGLRSAAAASVRVVGHTDNT---GSEEGNERLSVS 134

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           RA S    L+  GVS   I+   G         +      + NRR++I V ++
Sbjct: 135 RADSVRNHLVSRGVSTTAITT-DGRGSREPIADNATPAGRAQNRRVEIFVAEK 186


>gi|239995434|ref|ZP_04715958.1| sodium-type flagellar protein MotY [Alteromonas macleodii ATCC
           27126]
          Length = 118

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 8/107 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
            +  +S+     +   L  IGE L    E+  +   G+TD+        +N +LS+ RA 
Sbjct: 13  SYQNNSTELTKYSQKRLTMIGEYLKEDGELELVLLDGYTDSY---GGRYNNEQLSIRRAN 69

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                L   GV EDRI +++G    R    +D     + NRR+ + +
Sbjct: 70  EVKSYLTTLGVPEDRI-QLTGHGEKRHIAPNDTRESRAQNRRVVVRL 115


>gi|332297244|ref|YP_004439166.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
 gi|332180347|gb|AEE16035.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
          Length = 436

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D+E+G     + D    +            K +    +   R  D    +   +  L  +
Sbjct: 253 DNERGAIDHYNEDFRIIVESAYGNTFEFSGKAQAEVQEFASRSADRLADVRERIDQLGIE 312

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISI 268
           N            G+ IS+        F   S++ L    + L+KI E+L+      + I
Sbjct: 313 NAQ----VRADEKGLTISL----ENIQFKADSAVLLESEKMKLRKIAEILSLFPENDLLI 364

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            GHT        A     LS  RA +  + LM+ G+ +       G         +    
Sbjct: 365 TGHT---ALAGTAASRTALSEQRAKAVAEYLMQLGIRDSYHIFTQGLGGEHPIAPNTTEA 421

Query: 329 --SANRRIDILVEDR 341
             + NRR++I V D+
Sbjct: 422 NKARNRRVEITVMDK 436


>gi|313887354|ref|ZP_07821045.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299263|ref|YP_004441184.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|312923273|gb|EFR34091.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176326|gb|AEE12016.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 225

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 8/146 (5%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                  +   +  G   ET   G  I ++      +F+ SSS     +   L+K  + L
Sbjct: 73  MEKQKKELEQQLPAGTQVETVNEGQAIKVVFDSGL-LFNTSSSTLSSSSRNDLRKFADNL 131

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             + + +  I GHTD+       R N  LSL+RA S    L   GVS  R+    G   H
Sbjct: 132 NKNDDTVLEIIGHTDS---SGNDRINDPLSLNRAKSVRDFLEGQGVSSVRMK-YEGRGSH 187

Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342
                +        NRR+++ +   Q
Sbjct: 188 EPVDTNATAEGKRKNRRVEVFILPSQ 213


>gi|228018097|gb|ACP52727.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|224417757|ref|ZP_03655763.1| motility protein MotB [Helicobacter canadensis MIT 98-5491]
 gi|253827100|ref|ZP_04869985.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
 gi|313141298|ref|ZP_07803491.1| motb protein [Helicobacter canadensis MIT 98-5491]
 gi|253510506|gb|EES89165.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
 gi|313130329|gb|EFR47946.1| motb protein [Helicobacter canadensis MIT 98-5491]
          Length = 256

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 13/204 (6%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +  +  E    L  +  + ++  K +     P+    I A +  +   ++   + + 
Sbjct: 40  ATFTTEKIDEAIGSLEGTFAVLENGVKTQINPPAPILATPIEAQQEMEDATNIFASLITE 99

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE----TIVVLQKIGEV 258
            + +        V FE    G++I I +     +F+  S+          +  L    + 
Sbjct: 100 YNEINKLANGPAVEFEEAEEGVIIRIPESL---LFESGSATLTNSSGLAFLKRLTLEFDK 156

Query: 259 LAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           L  +  + +I GHTD  P R      DN  LS+ R  +  ++++  G+S++R+    G  
Sbjct: 157 LPETALIKAI-GHTDNVPMRENPIFADNLELSIARGVNVAELIITEGISKERVL-GGGEG 214

Query: 317 HHRLKIASD--PMNSANRRIDILV 338
                 ++    + + NRR+D+ +
Sbjct: 215 EFSPIASNKIPELRAKNRRVDLYI 238


>gi|111115105|ref|YP_709723.1| flagellar motor protein MotB [Borrelia afzelii PKo]
 gi|216263787|ref|ZP_03435781.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
 gi|110890379|gb|ABH01547.1| flagellar motor rotation protein B [Borrelia afzelii PKo]
 gi|215979831|gb|EEC20653.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
          Length = 260

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 16/162 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248
           Q      + ++   +     K ++      GI+IS+        FD +S+        ++
Sbjct: 91  QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302
           I  +     VL+       I GHTD   +      ++NW LS+ R+ +        L +S
Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSVARSVNMLEHILNYLDQS 207

Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            V   +   ++SGF   R     D       NRRIDIL+   
Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249



 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57
          +             + + Y D +T+L+ FF+ M+ +N  
Sbjct: 4  RTKKPLKCDEGAPDYMLTYGDMVTLLLVFFVTMFSLNDI 42


>gi|85714945|ref|ZP_01045930.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85698142|gb|EAQ36014.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 209

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD  S+    +    L  +G+ L        VI + GHTDA   +   R N  LS  RA 
Sbjct: 99  FDFDSAELSAKAEPQLNNLGQALTSPELAGSVIMLGGHTDA---KGSDRYNQSLSERRAE 155

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L++   +S + +  + G+   RLK  +DP  + NRR++I+
Sbjct: 156 TIKRFLIERYKISPENLVAV-GYGESRLKNKADPDAAENRRVEIV 199


>gi|295133926|ref|YP_003584602.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
           SM-A87]
 gi|294981941|gb|ADF52406.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
           SM-A87]
          Length = 281

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 12/232 (5%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             ST QK + ++ E    Y +   +       +        +  +  D+    NK ++  
Sbjct: 37  TKSTLQKTRVEKEEIEEKYAAIEARVADYNAKINSLRSSNDEKLEMNDVTAMSNKTKDRM 96

Query: 175 LPPLSKEKILAMKRKKRLQD-LAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQR 232
              ++K     ++  + L+D +   IS  L   + +      V     +T ++I++ D+ 
Sbjct: 97  RKTIAKMDASELEGVETLEDSINAAISYNLKNEITEGKDGDDVDITVDKTVVMINVSDKL 156

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR--NIARDNWRLSL 289
              +F   S     +   +L+K+ EV+     + + + GHTD       +   DNW LS+
Sbjct: 157 ---LFRSGSYRLSNDAQPLLKKLAEVINSEPSMEVMVEGHTDNRTMVEDSWLEDNWDLSV 213

Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            RA +  + L  K  V   ++    G + +   + +   +  + NRR  I+V
Sbjct: 214 RRATAVVRQLQDKYDVDGAKLIAA-GRSSYSPLVENTSKDNMAKNRRTRIVV 264


>gi|89891804|ref|ZP_01203306.1| putative flagellar motor protein MotB [Flavobacteria bacterium
           BBFL7]
 gi|89515959|gb|EAS18624.1| putative flagellar motor protein MotB [Flavobacteria bacterium
           BBFL7]
          Length = 287

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 18/246 (7%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            +  N  D +      + + + LEN +  +    +  + K +  +  + G  +       
Sbjct: 27  ELETNYNDTRSELQKTRVEKEDLENKMEQIEMRVERYNSKIASLKSDQDGMMVSTDGGSL 86

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQD-----LAKKISSTLSGLVADNIVKGVLFET 219
                 +      L       +     L+D     +A  I+  +    +D     +    
Sbjct: 87  VLSENNKKAMRKTLQDVPAAKLAGATTLKDSLNIAIAHNIAKKMGSTSSDK---DLNVSI 143

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
             T ++I+I D     +F  SS     +   +L KI EV+A      I + GHTD+   +
Sbjct: 144 EETVVMINIDDDL---LFKDSSYRVSNDADEILAKIAEVVASEPSLEILVEGHTDSRTVK 200

Query: 279 NIAR--DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
             +   DNW LS +R+ +  + L +  GV+ +++  ++G A +    A+D  +  + NRR
Sbjct: 201 QGSYIKDNWDLSTERSAAIVRRLEEKFGVAPEQLI-VAGRASYDPIAANDSKDNMARNRR 259

Query: 334 IDILVE 339
             I++ 
Sbjct: 260 TQIVIM 265


>gi|229513150|ref|ZP_04402615.1| protein F-related protein [Vibrio cholerae TMA 21]
 gi|229349560|gb|EEO14515.1| protein F-related protein [Vibrio cholerae TMA 21]
          Length = 204

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMSNAMTQSRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|170724980|ref|YP_001759006.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810327|gb|ACA84911.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 229

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD  S    PE+ ++L K+ + L  + EVI + GHTD          N+ L L RA 
Sbjct: 123 RVYFDFDSKSLTPESRLILDKVAKRLVQAPEVIKLVGHTDN---SGSEEYNYSLGLLRAD 179

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
           +A   L K GV + ++         R   +++     + NRR+++L
Sbjct: 180 NAQTYLNKQGVRDTQLKS-ESQGETRPIASNENLDGRALNRRVELL 224


>gi|289641193|ref|ZP_06473360.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
 gi|289508955|gb|EFD29887.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
          Length = 226

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 21/176 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--- 233
           P ++    A      + D A  I  ++  +     ++ +  E +   +     D      
Sbjct: 53  PTARAATDAPTTAPTVTDQA--IIESIREINPAAAIRPIDVERSVVTLRTERRDGSGVVV 110

Query: 234 ----TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 +F   S+         L  I   L   T  I++ G+TD++        N  LS 
Sbjct: 111 TISSDVLFAFDSANLTKAAREQLDGIAAQLGRVTGTITVNGYTDST---GTPAYNVILSQ 167

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDIL 337
            RA +   +L +       +   +G                 +      NRR+ I+
Sbjct: 168 QRANAVANLL-RPKAPPGVLVSATGHGAANPVAPNTNSDGSDNSAGRGQNRRVSII 222


>gi|13472165|ref|NP_103732.1| hypothetical protein mll2368 [Mesorhizobium loti MAFF303099]
 gi|14022910|dbj|BAB49518.1| mll2368 [Mesorhizobium loti MAFF303099]
          Length = 167

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+         L +  + L  +        + GHTDA+      R N  LS  RA 
Sbjct: 65  FALDSAQLDQTARAELDEFAKALKDNRLSTFSFVVEGHTDAT---GPDRYNQDLSQRRAQ 121

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           S    L  +GV   R+  I G      ++A+ P +  NRR+++ + 
Sbjct: 122 SVAAFLEANGVESVRLEAI-GLGKSHPRVAN-PYDPVNRRVEMRIR 165


>gi|228018087|gb|ACP52722.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|228018083|gb|ACP52720.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018091|gb|ACP52724.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018093|gb|ACP52725.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018101|gb|ACP52729.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018103|gb|ACP52730.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018105|gb|ACP52731.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018107|gb|ACP52732.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018115|gb|ACP52736.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018117|gb|ACP52737.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018125|gb|ACP52741.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018127|gb|ACP52742.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018129|gb|ACP52743.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018131|gb|ACP52744.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018133|gb|ACP52745.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018135|gb|ACP52746.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|309782736|ref|ZP_07677457.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
 gi|308918514|gb|EFP64190.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
          Length = 274

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 9/151 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + + Q L   +++ L           V   + +  +  ++ ++     F+  S+   P+ 
Sbjct: 126 EAQRQQLTSDMATALGQSYTIKNGLRVAAVSEQGLLDQTLANRIIE--FETGSATLTPKG 183

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +L ++  VL         I GHTD          N  LS  RA +    L+  G  + 
Sbjct: 184 RAILDEMAAVLPRLNGRKIEIVGHTDN---SGSRALNLNLSQARAETVKNYLIAKGAEQG 240

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++ + G    +   A++     S NRRI+ 
Sbjct: 241 TLTAM-GVGPDQPVAANNTDEGRSRNRRIEF 270


>gi|114778984|ref|ZP_01453771.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Mariprofundus ferrooxydans PV-1]
 gi|114550783|gb|EAU53353.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Mariprofundus ferrooxydans PV-1]
          Length = 466

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 12/275 (4%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +   A++G    ++     S                    + +    +        + 
Sbjct: 184 LVSSNPAARGQLYNESRNSIESARTSQQIAGLGKQLKKKPANVEAWVNSRNSDMETIALA 243

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              N   +      +   +E    +  + DL+ +  +++   L     E         + 
Sbjct: 244 LKLNLDNTASPGERVKLITEAIGQMRSNYDLQLADARQQIDTLQGNLSELDDTRSSLGQA 303

Query: 193 Q---DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    + ++  + ++ L        V    T    +I  +   +   F   S+I   E+ 
Sbjct: 304 RYKLQIKREAEAKIAQLAKLFDPSQVELFLTTDADVIIRMKSIH---FPSGSAIIPSESY 360

Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L+   + +    +  + + GHTD+         N  LS  RA +  + L     +  R
Sbjct: 361 DLLELASKAIDLFGDRAVRVEGHTDSM---GNDEYNQNLSERRATTVKEYLDARFSNNKR 417

Query: 309 ISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
                GF  ++    ++     S NRRIDI++   
Sbjct: 418 TITSIGFGENKPIANNEKAEGRSKNRRIDIVLLAP 452


>gi|325475131|gb|EGC78317.1| OmpA family protein [Treponema denticola F0402]
          Length = 391

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 12/143 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +  L+  +  KG+     +  + I + D R    F       LPE +  +  I E L  
Sbjct: 256 DIELLLEKHKEKGIELSNPKNIVKIIMYDIR----FVADMPDVLPEEMGKIDVIAEALLK 311

Query: 262 --STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                   I GHT      N   D   LS+ RA      + K G+   RI    G+   R
Sbjct: 312 LGPYTKFLIEGHTADL---NRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTR 367

Query: 320 LKIA--SDPMNSANRRIDILVED 340
                 ++   + NRR++I V  
Sbjct: 368 PVAPSNNETNMAKNRRVEITVIR 390


>gi|326424248|ref|NP_762484.2| protein F-like protein [Vibrio vulnificus CMCP6]
 gi|319999634|gb|AAO07474.2| Protein F-related protein [Vibrio vulnificus CMCP6]
          Length = 198

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
              T+ E    +     + P   + + A K + +   L   +                  
Sbjct: 28  APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 78

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276
                 I+I + +  +   F   S+   P +   +  +G  L   ++V  +  GH D++ 
Sbjct: 79  -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 134

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N  LS  RA    + L+ S V E R+    G+  +    ++  +N    NRR+
Sbjct: 135 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 190

Query: 335 DILV 338
           ++++
Sbjct: 191 ELML 194


>gi|320158835|ref|YP_004191213.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
 gi|319934147|gb|ADV89010.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
          Length = 200

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
              T+ E    +     + P   + + A K + +   L   +                  
Sbjct: 30  APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 80

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276
                 I+I + +  +   F   S+   P +   +  +G  L   ++V  +  GH D++ 
Sbjct: 81  -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 136

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N  LS  RA    + L+ S V E R+    G+  +    ++  +N    NRR+
Sbjct: 137 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 192

Query: 335 DILV 338
           ++++
Sbjct: 193 ELML 196


>gi|254463240|ref|ZP_05076656.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206679829|gb|EDZ44316.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 316

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 92/315 (29%), Gaps = 23/315 (7%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPF-----GKNLMTASKGIFDEQNPPERSSQNKIDLS 101
           FF+++ ++ +     +  +            G +        FD  + P R  +  +   
Sbjct: 6   FFVILGLLPSLASAVELTLPGSARQTAGQNLGVDSYALPIAKFDGTDIPSRIFEGFVTRQ 65

Query: 102 ----IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
                   +T   + L +    ++  Y  +                 + +          
Sbjct: 66  VWRIEGGGVTPLQLLLPLRDELKENGYTLIFECAARACGGFDFRFGTDVIDAPDMYVALD 125

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD------NI 211
                       +       L   +  A    + +Q      +       ++        
Sbjct: 126 DYRFVSAIKGEADAPKAALSLLISRSAASAYIQIIQISVDDAADISVFKGSEIIASTTGS 185

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRG 270
            + V  +     + +S     +  MF   SS     +   LQ + + L  ++     + G
Sbjct: 186 GQAVTTKGAAATLDVSGRVILSDLMFQTGSSNLGEGSFKSLQNLADYLRSNSTRKVALVG 245

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS 329
           HTDA         N  LS  RA S  + L++  GV  D++S   G        ++     
Sbjct: 246 HTDAE---GSLEGNIALSKRRASSVRKRLIEAYGVPTDQLSA-DGVGFLSPVASNLSAAG 301

Query: 330 A--NRRIDILVEDRQ 342
              NRR++ ++   Q
Sbjct: 302 RTANRRVEAVLISTQ 316


>gi|170697803|ref|ZP_02888889.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria IOP40-10]
 gi|170137305|gb|EDT05547.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria IOP40-10]
          Length = 404

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 12/154 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  LA+ +   L   VA   V+ +    +    L      R   +F    +   P    V
Sbjct: 258 LDALARNLEQRLRDEVAAGNVELIRAPGSDALTL------RFGGLFAPGDAAVAPWGASV 311

Query: 252 LQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +   G  +A  T    + + G+ D++  R+     N  LS  RA    Q+L+ +GVS  R
Sbjct: 312 VASAGREIAVLTGSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPR 371

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           I  + G         +      + NRR+++ + D
Sbjct: 372 I-SVEGNGEADSLADNGTAAGRARNRRVEVTITD 404


>gi|37676733|ref|NP_937129.1| putative protein F-related protein [Vibrio vulnificus YJ016]
 gi|37201276|dbj|BAC97099.1| putative protein F-related protein [Vibrio vulnificus YJ016]
          Length = 193

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
              T+ E    +     + P   + + A K + +   L   +                  
Sbjct: 23  APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 73

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276
                 I+I + +  +   F   S+   P +   +  +G  L   ++V  +  GH D++ 
Sbjct: 74  -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 129

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N  LS  RA    + L+ S V E R+    G+  +    ++  +N    NRR+
Sbjct: 130 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 185

Query: 335 DILV 338
           ++++
Sbjct: 186 ELML 189


>gi|315082132|gb|EFT54108.1| OmpA family protein [Propionibacterium acnes HL078PA1]
          Length = 368

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|228018109|gb|ACP52733.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018111|gb|ACP52734.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018113|gb|ACP52735.1| fibronectin-binding protein [Campylobacter coli]
          Length = 223

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 135 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 191

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 192 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 223


>gi|254415575|ref|ZP_05029335.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
 gi|196177756|gb|EDX72760.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
          Length = 727

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 91/286 (31%), Gaps = 18/286 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN---KIDLSIDEHITKNSVDLKIGSTNQ 120
            I    NP             +  N P+  S+      D        +    +++    +
Sbjct: 438 QIGDGHNPPRTTKYQRQTTGNNGINAPQFVSEEFVQLGDQLEVLGQAEPGSTVELYRVRE 497

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
             +      +    S +  +E          + G+ +       ++   E        S 
Sbjct: 498 AAESVYGPLSEPIASATTDAEGEFRVTLTGLQPGETISAIATHPENGTSEPALNAVVTSS 557

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +  +    + +   + + ++ T            V        + + +    +   F   
Sbjct: 558 DGTIPANPEPQPPVIPQCLTQTPPPSSPPEPTPPVQ-----QPLTLRVPRNVH---FALD 609

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            +   PE+  VL ++  VL       I ++GHTD       A  N  L+  RA +    L
Sbjct: 610 RADISPESAAVLDQVAAVLQEYPFLTIELQGHTDPR---ASAAYNQALARRRALAVRNYL 666

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
           ++ GV   R+  I  F   + +         + +RR++I+ +D +G
Sbjct: 667 LRQGVDPGRM-TIRSFGESQRRTTGSGVVDYARDRRVEIIFQDLRG 711


>gi|203284201|ref|YP_002221941.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
 gi|201083644|gb|ACH93235.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
          Length = 262

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 18/167 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245
            K  Q      + ++   V       V+      G+++S++       FD +S+      
Sbjct: 89  AKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLAD---AFFDSASAEVKLDD 145

Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             + I  +      L +      I GHTD        I + NW LS  RA +  + ++  
Sbjct: 146 NRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205

Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
                +I        +SGFA  R     D       NRRIDIL+   
Sbjct: 206 -TDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251


>gi|86748938|ref|YP_485434.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86571966|gb|ABD06523.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 165

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L K  + L        +I GH D          N  L   R
Sbjct: 57  DRVFFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADER---GTREYNIALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 114 AQSVRNYLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRR 156


>gi|254488269|ref|ZP_05101474.1| OmpA domain protein [Roseobacter sp. GAI101]
 gi|214045138|gb|EEB85776.1| OmpA domain protein [Roseobacter sp. GAI101]
          Length = 632

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 87/302 (28%), Gaps = 11/302 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +     TD D    +         ++      + +  +P     +    LS D  +  
Sbjct: 307 ITLVAAAGTDQDLFDRVVGELENALPDVFALDARLTEAVDPNAGPPEFVATLSTDGKVQL 366

Query: 109 NS--VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
                D ++              +  Y +     +   +  TR       L K  +    
Sbjct: 367 RGRLSDEELRELADSYAKASFGTDKVYTAARIVDDLPADWPTRVLSGLDALSKLANGSVI 426

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-L 225
           +  +              +         L +     ++ +  + +   +   T       
Sbjct: 427 VQPDNVSVKGNTGNPDAGSQIATLLAGKLGEGQQYDIAVVYQEKLDPVLGLPTPEECEAQ 486

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           I  + +     F+  S+      +  + +I E+L    ++   I+G+TD+         N
Sbjct: 487 IGEVVKAGKINFEPGSATIDASALSTMDQIAEILKPCGDIALEIQGYTDSQ---GREEMN 543

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI-LVEDR 341
             LS  RA S    L    V         GF       ++D       NRRI+  L+   
Sbjct: 544 LALSQSRAQSVLNELRARRVLTASFVA-KGFGEEAPVESNDTEEGREANRRIEFRLIRPE 602

Query: 342 QG 343
           +G
Sbjct: 603 EG 604


>gi|187918154|ref|YP_001883717.1| flagellar motor protein MotB [Borrelia hermsii DAH]
 gi|119861002|gb|AAX16797.1| chemotaxis MotB protein [Borrelia hermsii DAH]
          Length = 262

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 18/167 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245
           +K  Q      + ++   V       V+      G+++S++       FD +S+      
Sbjct: 89  EKNKQASQVSKNKSIIEFVEKIQSNKVIVREHERGVVVSLLAD---AFFDSASAEVKLDD 145

Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             ETI  +      L + +    I GHTD        I + NW LS  RA +  + ++  
Sbjct: 146 NRETIQKIASFIGFLDNQSYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205

Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              + +I        +SGFA  +     D       NRRIDIL+   
Sbjct: 206 -TDQSKIQSIESKFEVSGFAGSKPVATDDTPEGRAYNRRIDILITSD 251



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT--DDDTKKAIEQYFN 70
          + +            + + Y D +T+L+ FF+ M+ +N     ++  K +   F 
Sbjct: 5  RVRKKRSKCEEGAPDYMLTYGDMVTLLLVFFVTMFSLNDIILKENVLKIMSASFT 59


>gi|121725841|ref|ZP_01679141.1| OmpA family protein [Vibrio cholerae V52]
 gi|147672308|ref|YP_001215442.1| OmpA family protein [Vibrio cholerae O395]
 gi|121631606|gb|EAX63974.1| OmpA family protein [Vibrio cholerae V52]
 gi|146314691|gb|ABQ19231.1| OmpA family protein [Vibrio cholerae O395]
 gi|227015278|gb|ACP11487.1| protein F-related protein [Vibrio cholerae O395]
          Length = 207

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 52  QKNTSVMSNAMTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200


>gi|119474693|ref|ZP_01615046.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
           HTCC2143]
 gi|119450896|gb|EAW32129.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
           HTCC2143]
          Length = 209

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS+   L +++++  +     +   L+  +A           T   I IS      + +
Sbjct: 42  ELSQTLELEIQKRQAEEQRRMALEQALAAPLATG-----RVTLTNGRIGIS-----GSVL 91

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPF---RNIARDNWRLSL 289
           F  +S     E   +LQ +   L        E++ + G TD  P     N   DNW LS 
Sbjct: 92  FATNSDQLQVEGRELLQTLVAPLQVYLGERDEMLMVSGFTDDKPIQRGNNRFADNWELSS 151

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
           +RA +  + L++ G+    +   + F   +  + +      + NRR++
Sbjct: 152 ERALTVTRALIEEGMPSSMVFAAA-FGAQQPVVPNTDGDSRARNRRVE 198


>gi|84499777|ref|ZP_00998065.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
 gi|84392921|gb|EAQ05132.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
          Length = 641

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 84/297 (28%), Gaps = 11/297 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF--DEQNPPERSSQNKIDLSIDEHI 106
           + +    + D  T   +         ++          DE  P   +  +       +  
Sbjct: 307 VTLIAAESADRATFDRVVGELENTLPDVFALHAVFPETDEGAPRGPAEFSATLSPEGQVQ 366

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +  V  ++   +     +    +      ++  +      +     G            
Sbjct: 367 LRGRVHDELSRQSADSYARSRFGSDDVYFAARLDDSVPEGWSLRVLAGLQALSELANGAV 426

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGIL 225
              E    +  ++          + L D        T+     + +       T    I 
Sbjct: 427 TVTETAVTVRGVTGNADANADIARILSDRLGDGEDFTIEVTYDEKLDPEAALPTPEECIA 486

Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283
            +  I +     F+  S+    ++  +L  I EVL       + I GHTD+         
Sbjct: 487 DVKSIQESRKINFEPGSATVTGDSRAILDDIAEVLKFCGPVDLEIGGHTDSQ---GREIM 543

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N +LS DRA +    L +  V        +G+   +    +D       NRRI+  +
Sbjct: 544 NEQLSQDRADTVLAELRQRRVKTAGFVA-TGYGETQPIADNDTEEGREENRRIEFSL 599


>gi|302035651|ref|YP_003795973.1| putative OmpA/MotB family outer membrane protein [Candidatus
           Nitrospira defluvii]
 gi|300603715|emb|CBK40046.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
           Nitrospira defluvii]
          Length = 501

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 11/291 (3%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                ++ KA     +   K+     + +       ++       +  + +  ++ +   
Sbjct: 188 ATATIESLKARISSLDQQLKDREQTYETVRSRLMERDKLVPQYNAMIAEIYQARHRIAAL 247

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
               N+K +          LS+SQ+     N  +  + +       +  +     +    
Sbjct: 248 EQRLNEKGRDLSPRQKGTQLSSSQRDGGPLNQRSGAAHQSLGDTTKSIPDGKSAAQGKDS 307

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                       + + R   +A      L  L  DN  K +        + +++      
Sbjct: 308 TRSGVAFPGNPAQSEARNGSIAAVKEELLKVLPGDNRQKTISMRQDGNRLTVALDSNL-- 365

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSL 289
            +F    +   PE   +L++IG VL    +    + GHTD             DN  LS 
Sbjct: 366 -LFTWGDAALSPEGATILKRIGAVLGQLPDKFVQVAGHTDNQALSKTLQKTFPDNKALSW 424

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            RA +A + L+  G+  D+   + G A  R   ++        NRR+++++
Sbjct: 425 ARAENARRALVNGGIPADKTKAV-GLADTRPLTSNATEQGRQKNRRLELII 474


>gi|261212428|ref|ZP_05926713.1| protein F-related protein [Vibrio sp. RC341]
 gi|260838359|gb|EEX65015.1| protein F-related protein [Vibrio sp. RC341]
          Length = 182

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 13/178 (7%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D+    + +  Y     + ++ +++ +  ++Q  +         LV++ I   ++     
Sbjct: 8   DVAPKGDFDVRYPEWGYAPQQSVSVAQTPKMQARSSSYEQLRQYLVSNGIEHEIMPGDYP 67

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280
                 +I  +NT  F+  S+     +   L K+ + LA  + V  +  GHTD +     
Sbjct: 68  ------MIKLKNTIKFETGSAKVSASSKQWLDKMAQFLAGESGVDIVLEGHTDNT---GT 118

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            + N +LS  RA S    L++  V+++ I    G+  H     ++     + NRR+++
Sbjct: 119 QKFNDKLSEKRATSVKSALVQRQVAQNAIYT-RGYGEHVPACTNNTKKGRACNRRVEV 175


>gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
           centenum SW]
 gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
           centenum SW]
          Length = 356

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  T  FD   S    +   VL+ +       +   + + GH D       A  N RLS+
Sbjct: 249 RNFTVFFDWDRSDLTADARQVLRSVAGDARSGNIFAVQVTGHADT---SGPADYNQRLSI 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            RA +    L+  G+  D+I  I G       + +       +NRR  I+
Sbjct: 306 RRAEAVRDFLITQGIPADQI-AIEGRGETDPLVPTADGVREPSNRRSVII 354


>gi|262190496|ref|ZP_06048743.1| protein F-related protein [Vibrio cholerae CT 5369-93]
 gi|262033626|gb|EEY52117.1| protein F-related protein [Vibrio cholerae CT 5369-93]
          Length = 204

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++   +     +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMPNAMTQPRSASYEDLRHYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|197337755|ref|YP_002158384.1| OmpA family protein [Vibrio fischeri MJ11]
 gi|197315007|gb|ACH64456.1| OmpA family protein [Vibrio fischeri MJ11]
          Length = 1600

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 28/189 (14%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S ++ +   +P  S+E I   +           + + L+ LV  +    V          
Sbjct: 576 SNDRLQEAAIPRDSEEAIKEQQNA--YDQAVDSMRAKLAQLVVKDQKHHVETVGFS---- 629

Query: 226 ISIIDQRNTPMFDKSSSIPLPET------IVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
                + +  MFD  S    P+          + +  + L+ +  VI I GHT +     
Sbjct: 630 -EFQLRLDATMFDFDSHEIQPDFSGASTPFQSIAEELKKLSGAPFVIMIIGHTCSI---G 685

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDR-------ISKISGFAHHRLK--IASDPMNSA 330
               N  LS  RA +    ++ + +S+++       +  + G           ++     
Sbjct: 686 SEAYNLELSKQRAVAVKNSIIDA-LSDEKYKSIWSDLLVVKGEGESTPLPGNNNETEEER 744

Query: 331 --NRRIDIL 337
             NRR++I+
Sbjct: 745 KLNRRVEIV 753


>gi|91794083|ref|YP_563734.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91716085|gb|ABE56011.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 373

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 8/154 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  +       +   V  +       ++      + +FD  SS+  P     +
Sbjct: 218 DADKDGVNDNIDKCPNTPMTHKVDAKGCSVYEFVTQKYDLGSILFDNDSSVIKPGAYSDV 277

Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           + +   L    +   +  GH            N  LS  RA +   ++  K  ++  RI 
Sbjct: 278 EILVSHLEKYPQHTVVIEGHASNV---GTPDYNLLLSERRANAVAALVTSKYKINGSRIK 334

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            + G+   + ++A +   +   NRRI+ +V   +
Sbjct: 335 SV-GYGLTKPQMAGNSAEAHRLNRRIEAIVTGTE 367


>gi|315223627|ref|ZP_07865481.1| immunogenic peptidoglycan-associated lipoprotein PG4
           [Capnocytophaga ochracea F0287]
 gi|314946408|gb|EFS98403.1| immunogenic peptidoglycan-associated lipoprotein PG4
           [Capnocytophaga ochracea F0287]
          Length = 660

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   +   P+    L KI +V+     +   +R HTD+         N  LS 
Sbjct: 546 KIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSR---GSDSYNLALSQ 602

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S  + L+  G+ +DRI    G+   +L          ++  + ANRR + ++
Sbjct: 603 RRAKSTIKWLIAHGIHKDRI-TGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657


>gi|256820527|ref|YP_003141806.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582110|gb|ACU93245.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 660

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   +   P+    L KI +V+     +   +R HTD+         N  LS 
Sbjct: 546 KIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSR---GSDSYNLALSQ 602

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S  + L+  G+ +DRI    G+   +L          ++  + ANRR + ++
Sbjct: 603 RRAKSTIKWLIAHGIHKDRI-TGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657


>gi|213583424|ref|ZP_03365250.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 142

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300
              P    +L+ I  VL      IS+ GHTD  P+ N      NW LS DRA ++ + L+
Sbjct: 1   EVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELV 60

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
             G+   ++ ++ G A         P ++ NRRI +LV ++Q
Sbjct: 61  AGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 102


>gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
 gi|237709882|ref|ZP_04540363.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
 gi|237725448|ref|ZP_04555929.1| outer membrane protein [Bacteroides sp. D4]
 gi|254881970|ref|ZP_05254680.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
 gi|265753535|ref|ZP_06088890.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
 gi|294776453|ref|ZP_06741929.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|319641023|ref|ZP_07995729.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
 gi|212664242|gb|EEB24814.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
 gi|229436135|gb|EEO46212.1| outer membrane protein [Bacteroides dorei 5_1_36/D4]
 gi|229455975|gb|EEO61696.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
 gi|254834763|gb|EET15072.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
 gi|263235249|gb|EEZ20773.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
 gi|294449696|gb|EFG18220.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|317387353|gb|EFV68226.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
          Length = 243

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 10/155 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+             +            + +       +F+  ++    +    L K  
Sbjct: 78  KKMDKAAEEAAQIQGAQVEQVTDNNGLQAVKVTFDSG-ILFNTGNAALSAQAKSALSKFA 136

Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309
             +   +    +SI G+TD   +RN   +     N  LS +RA S    L+  GVS  +I
Sbjct: 137 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQI 196

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             + G         +D       NRR+++ +   Q
Sbjct: 197 KSVEGLGQADPIGNNDTAEGRQQNRRVEVYMYASQ 231


>gi|158422149|ref|YP_001523441.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
 gi|158329038|dbj|BAF86523.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
          Length = 164

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   +   PE   +L +  + L        +I GH D          N  L   R
Sbjct: 56  DRVFFDTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADER---GTREYNIALGAKR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 113 AQNVRDYLASRGIDPARMRTIS-YGKERPVAVCNDISCWSQNRR 155


>gi|121585594|ref|ZP_01675390.1| protein F-related protein [Vibrio cholerae 2740-80]
 gi|229506176|ref|ZP_04395685.1| protein F-related protein [Vibrio cholerae BX 330286]
 gi|229509966|ref|ZP_04399446.1| protein F-related protein [Vibrio cholerae B33]
 gi|229516473|ref|ZP_04405920.1| protein F-related protein [Vibrio cholerae RC9]
 gi|229605715|ref|YP_002876419.1| protein F-related protein [Vibrio cholerae MJ-1236]
 gi|255746568|ref|ZP_05420515.1| protein F-related protein [Vibrio cholera CIRS 101]
 gi|262158841|ref|ZP_06029954.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
 gi|121550211|gb|EAX60225.1| protein F-related protein [Vibrio cholerae 2740-80]
 gi|229346354|gb|EEO11325.1| protein F-related protein [Vibrio cholerae RC9]
 gi|229352411|gb|EEO17351.1| protein F-related protein [Vibrio cholerae B33]
 gi|229356527|gb|EEO21445.1| protein F-related protein [Vibrio cholerae BX 330286]
 gi|229372201|gb|ACQ62623.1| protein F-related protein [Vibrio cholerae MJ-1236]
 gi|255736322|gb|EET91720.1| protein F-related protein [Vibrio cholera CIRS 101]
 gi|262029414|gb|EEY48065.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
          Length = 204

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|90413724|ref|ZP_01221712.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
 gi|90325193|gb|EAS41690.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
          Length = 241

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       G+        I++++    N   F    S      +  L+ +  
Sbjct: 101 YMDVQETKLRQQLESTGISVTRDGDNIVLNM---PNEITFGIDQSDLSSRAVAALKNVAL 157

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           V     +  I++ G TD++     A  N RLS  RA      LM+ GV+ +R+    G  
Sbjct: 158 VAKEYDKTLINVYGFTDST---GSASYNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMG 213

Query: 317 HHRLKIASDPM--NSANRRIDILV 338
             +   ++      + NRR++I++
Sbjct: 214 EAKPIASNKTEQGRAENRRVEIVL 237


>gi|70671520|gb|AAZ06132.1| outer membrane protein A [Acinetobacter sp. V-26]
          Length = 349

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S   P+    + K+ E LA        I GHTD +        N RLSL RA
Sbjct: 233 RVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIEGHTDNT---GPRALNERLSLARA 289

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    +        NRR+
Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 333


>gi|26991353|ref|NP_746778.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24986416|gb|AAN70242.1|AE016663_10 OmpA family protein [Pseudomonas putida KT2440]
          Length = 172

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GH D+      A  N +L
Sbjct: 61  YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 117

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V
Sbjct: 118 SERRAQSVTKALVGIGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 169


>gi|148555047|ref|YP_001262629.1| peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
 gi|148500237|gb|ABQ68491.1| Peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
          Length = 175

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +     E   +L +    LA    V  ++ GH D          N  L   RA +A
Sbjct: 73  FATDAYDVDAEDQAILTRQASWLAKYPNVSVTLEGHCDER---GTREYNLALGERRANAA 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDIL 337
              L+ +GVS  RI  +  +   R     + +   + NRR + I+
Sbjct: 130 KNFLVSAGVSASRI-SVISYGKERPVATGSDEAAWAQNRRAVTIV 173


>gi|91791747|ref|YP_561398.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91713749|gb|ABE53675.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 201

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q    +F  +S +  P+    ++ I  ++       ++I GH      +     N  LS 
Sbjct: 73  QELKILFPTNSYVLDPQYYGQIELIANMMKQYPNTNVTIEGHCSK---KGSYELNMALSH 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DI 336
           +RA +  QVL    G++  R++ I G++  R    SD   +   NRR+  +I
Sbjct: 130 NRANAVTQVLTSQFGIAPSRLNAI-GYSFDRPVDMSDTEEAHRRNRRVIAEI 180


>gi|314955058|gb|EFS99464.1| OmpA family protein [Propionibacterium acnes HL027PA1]
          Length = 368

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|326317618|ref|YP_004235290.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374454|gb|ADX46723.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 188

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD  S     E+   + ++G  LA    + + + GHTD          N RLSL R
Sbjct: 81  GKLLFDFDSVELNAESHDGVLRMGRALADVGIDALRVEGHTDEQ---GARAYNERLSLRR 137

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  +VL ++G+  D I  + G    R  +      S   NRR+ I+V
Sbjct: 138 AQAVARVLAEAGLPADHIGTV-GLGASRPVVQGTSAASRRENRRVAIIV 185


>gi|254500992|ref|ZP_05113143.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
           alexandrii DFL-11]
 gi|222437063|gb|EEE43742.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
           alexandrii DFL-11]
          Length = 158

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 11/137 (8%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++  +    D +   V   T +  ++       +   F++  S    +    L    + L
Sbjct: 20  AAACAQTKPDGLATNVKPGTGQDFVVNV----GDRVFFEEDQSTLNSQGQATLANQAKWL 75

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +      I++ GH D        + N  L   RA +A   L+  GVS  RI  IS +   
Sbjct: 76  SRYSKYTITVEGHADER---GTRQYNIALGARRAQAARDYLVSQGVSASRIKTIS-YGKE 131

Query: 319 RLKI--ASDPMNSANRR 333
           R       +   S NRR
Sbjct: 132 RPVAVCNDNSCWSQNRR 148


>gi|328469328|gb|EGF40274.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus 10329]
          Length = 340

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L+       + I GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               L+  GV+ + I ++           ++     + NRR+ + +    
Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317


>gi|258541844|ref|YP_003187277.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
 gi|256632922|dbj|BAH98897.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
 gi|256635979|dbj|BAI01948.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
 gi|256639034|dbj|BAI04996.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
 gi|256642088|dbj|BAI08043.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
 gi|256645143|dbj|BAI11091.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
 gi|256648198|dbj|BAI14139.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
 gi|256651251|dbj|BAI17185.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654242|dbj|BAI20169.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
          Length = 411

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RNIARDNWRLSL 289
             FD   S        ++    +  AH     I++ G+TD S      +     N RLSL
Sbjct: 301 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 360

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
            RA      LM+ GV    I  I G+      + +  +   + NRR++I+  
Sbjct: 361 RRAEVVKAELMRDGVPGTTID-IHGYGETHPLVTTGPNTKEAQNRRVEIIFR 411


>gi|29423528|gb|AAO73590.1| lateral flagellar MotY-like protein [Vibrio parahaemolyticus]
          Length = 340

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L+       + I GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               L+  GV+ + I ++           ++     + NRR+ + +    
Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317


>gi|28901394|ref|NP_801049.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153835953|ref|ZP_01988620.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus AQ3810]
 gi|260362948|ref|ZP_05775817.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus K5030]
 gi|260880235|ref|ZP_05892590.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus AN-5034]
 gi|260895352|ref|ZP_05903848.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus Peru-466]
 gi|28809941|dbj|BAC62882.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750707|gb|EDM61452.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus AQ3810]
 gi|308085759|gb|EFO35454.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus Peru-466]
 gi|308091961|gb|EFO41656.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus AN-5034]
 gi|308112265|gb|EFO49805.1| putative sodium-type flagellar protein MotY [Vibrio
           parahaemolyticus K5030]
          Length = 340

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L+       + I GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               L+  GV+ + I ++           ++     + NRR+ + +    
Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317


>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
 gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
          Length = 351

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
          Length = 342

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 214 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 270

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 271 ERRAQSVVDYLISKGIPADKISA-RGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 329

Query: 338 VED 340
           V+ 
Sbjct: 330 VKG 332


>gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola]
 gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola]
          Length = 324

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 196 KSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 252

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN---------RRIDIL 337
             RA S    L+  G+   +I    G       I    D +   N         RR++I 
Sbjct: 253 EKRAQSVVDHLVSKGIPASKIYA-RGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIE 311

Query: 338 VED 340
           V+ 
Sbjct: 312 VKG 314


>gi|78049766|ref|YP_365941.1| hypothetical protein XCV4210 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038196|emb|CAJ25941.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 418

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS      +++       +T + +S     +  MF        P+   ++ +I   
Sbjct: 277 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGLIAQIAAA 331

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +      + + GHTD  P R+   +DN+ LS  RA +  QVL     +  R+  I G   
Sbjct: 332 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGD 390

Query: 318 HRLKI-----ASDPMNSANRRIDILVEDRQ 342
            +         ++   + NRR++IL +  +
Sbjct: 391 SQPIARPVQLPAN--RARNRRVEILFQPGE 418


>gi|314916069|gb|EFS79900.1| OmpA family protein [Propionibacterium acnes HL005PA4]
          Length = 368

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
          Length = 346

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+  D+IS   G         +   N           + +RR++I 
Sbjct: 275 ERRAQSVVDYLISKGIPVDKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333

Query: 338 VED 340
           V+ 
Sbjct: 334 VKG 336


>gi|37704614|gb|AAR01579.1| OprF [Pseudomonas sp. MFY61]
          Length = 316

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL +  GV   RI  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRIDSV-GYGETRPVA 316


>gi|42524415|ref|NP_969795.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
 gi|39576624|emb|CAE80788.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
          Length = 319

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 12/119 (10%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPF-RNIARDNWRLS 288
               +FD  +          L+++   L        I++ GHTD+      + + NW LS
Sbjct: 111 DGEVLFDSGAVEVKETAKPNLRRVVSALRSIEGVNKIAVEGHTDSDAIQSGLVKSNWELS 170

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANRRIDILVE 339
             RA S  +   +SGV   ++   +GF                       NRR+ + V 
Sbjct: 171 SLRASSVVRYFEESGVD-SKLLSAAGFGSSHPLAPEVDKAGVSIPANKVLNRRVVVAVT 228



 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 18 KKKVAIDDTPNNLGS-----WKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQY 68
          K+     +   +  +     W + YAD MT+L  FF++M+ ++  D+       K + +Y
Sbjct: 6  KRSRVHLEEHEHEMAHDESNWLVSYADMMTLLFGFFVLMYSMSRFDNTKFDLVRKEVAKY 65

Query: 69 F 69
          F
Sbjct: 66 F 66


>gi|87311740|ref|ZP_01093855.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
           DSM 3645]
 gi|87285524|gb|EAQ77443.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
           DSM 3645]
          Length = 265

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 9/206 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            Q    +       ++   L K          +    +    +E    +   ++      
Sbjct: 57  AQIAQTQQQSKILQDEVGLLKKQLRDAGEQLTQAQQQIASAKQENTTLLASTRQRGGATI 116

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             +++L   V+   + G         I I I   +   +F   ++         L ++  
Sbjct: 117 TPNNSLQQSVSQIQISGAQVRVDGDLIRIEIPADQ---IFMTGTNTLHQNAYGTLDQVAN 173

Query: 258 VLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314
            +       +I + GHTD            +LS   A + +  L+  G V  +R+  + G
Sbjct: 174 AIRQQFPRNLIGVEGHTDNQAASPPFASQHQLSASMAQATFDQLVARGQVPPNRLF-VVG 232

Query: 315 FAHHRLKIASDPMN--SANRRIDILV 338
              +   +++      + NRRIDI++
Sbjct: 233 HGGNHPVVSNATPAGQARNRRIDIVI 258


>gi|330447990|ref|ZP_08311638.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492181|dbj|GAA06135.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 196

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 7/170 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+ ++    K+ K L D             AD  +  V+        + +  +     +
Sbjct: 17  SLTVQQPPVAKQTKNLYDQDSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS      +  +  +   LA   +  I ++G+         A  N  LS  RA + 
Sbjct: 77  FANDSSEIPESYMENIANMSAFLAKYPDTHIELKGYASPV---GSAAYNVALSKRRAQAI 133

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
            Q L+  GVS  RI  + GF       A D     + +RR+   V   QG
Sbjct: 134 RQALITEGVSPARIKTV-GFGDSDPVKADDVEESNALSRRVVAQVVGSQG 182


>gi|91227007|ref|ZP_01261544.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
 gi|91188809|gb|EAS75095.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
          Length = 224

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 10/123 (8%)

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281
            ++I + +Q +   F   S+    ++   ++ IG  LA  T+V  +  GH D++      
Sbjct: 109 HLMIRLKEQVH---FQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAE 162

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             N  LS  RA    + L+ + +   R+    GF  +  K ++   +    NRR+++ + 
Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPKCSNATASGKACNRRVELTLI 221

Query: 340 DRQ 342
             +
Sbjct: 222 VDE 224


>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
 gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
           [Klebsiella variicola At-22]
 gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
 gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
 gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
           [Klebsiella variicola At-22]
 gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
          Length = 350

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++         + G TD          N +LS
Sbjct: 222 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVMGFTDRI---GSEAYNQQLS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +IS   G             +    +A       +RR++I 
Sbjct: 279 EKRAQSVVDYLVAKGIPAGKISA-RGMGKSNPVTGNTCDNVKARAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|189500991|ref|YP_001960461.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496432|gb|ACE04980.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
          Length = 350

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 8/151 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + +  A      +        +  V  +  +  I  S         FD   ++  P +  
Sbjct: 202 KAEKGAYIAVDIIEEQAMKKNMVVVKADAMKKAIASSGRIALYGIFFDSGKAVIKPASKP 261

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           V+ +I ++L      V+ + GHTD          N  LS  RA +    L +   ++  R
Sbjct: 262 VIAEIAKLLKQDPSLVLHVVGHTDN---AGGYTFNMGLSRKRALAVVSALARQHNIASSR 318

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           +   +G  +      +      + NRR++++
Sbjct: 319 LIA-NGVGYLAPVATNTSAAGRAKNRRVELV 348


>gi|126737253|ref|ZP_01752988.1| OmpA family protein [Roseobacter sp. SK209-2-6]
 gi|126721838|gb|EBA18541.1| OmpA family protein [Roseobacter sp. SK209-2-6]
          Length = 210

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+         L +    +    E    + GHTD+         N RL   RA +A
Sbjct: 69  FDFDSAQLDATARAALDRQAHWIKQFPEVRFRVYGHTDSV---GSDAYNKRLGRRRAQAA 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L++ G+S  R+  +  F   R  I +      NRR
Sbjct: 126 VNYLVRQGISRHRLEALVSFGETRPVIVTAHRERRNRR 163


>gi|50841753|ref|YP_054980.1| putative outer membrane protein A [Propionibacterium acnes
           KPA171202]
 gi|289424480|ref|ZP_06426263.1| OmpA family protein [Propionibacterium acnes SK187]
 gi|289428850|ref|ZP_06430530.1| OmpA family protein [Propionibacterium acnes J165]
 gi|295129833|ref|YP_003580496.1| OmpA family protein [Propionibacterium acnes SK137]
 gi|50839355|gb|AAT82022.1| putative outer membrane protein A [Propionibacterium acnes
           KPA171202]
 gi|289155177|gb|EFD03859.1| OmpA family protein [Propionibacterium acnes SK187]
 gi|289157851|gb|EFD06074.1| OmpA family protein [Propionibacterium acnes J165]
 gi|291376750|gb|ADE00605.1| OmpA family protein [Propionibacterium acnes SK137]
 gi|313765278|gb|EFS36642.1| OmpA family protein [Propionibacterium acnes HL013PA1]
 gi|313772807|gb|EFS38773.1| OmpA family protein [Propionibacterium acnes HL074PA1]
 gi|313793172|gb|EFS41239.1| OmpA family protein [Propionibacterium acnes HL110PA1]
 gi|313806398|gb|EFS44905.1| OmpA family protein [Propionibacterium acnes HL087PA2]
 gi|313810947|gb|EFS48661.1| OmpA family protein [Propionibacterium acnes HL083PA1]
 gi|313814554|gb|EFS52268.1| OmpA family protein [Propionibacterium acnes HL025PA1]
 gi|313815353|gb|EFS53067.1| OmpA family protein [Propionibacterium acnes HL059PA1]
 gi|313817476|gb|EFS55190.1| OmpA family protein [Propionibacterium acnes HL046PA2]
 gi|313821987|gb|EFS59701.1| OmpA family protein [Propionibacterium acnes HL036PA1]
 gi|313824117|gb|EFS61831.1| OmpA family protein [Propionibacterium acnes HL036PA2]
 gi|313826484|gb|EFS64198.1| OmpA family protein [Propionibacterium acnes HL063PA1]
 gi|313831713|gb|EFS69427.1| OmpA family protein [Propionibacterium acnes HL007PA1]
 gi|313834406|gb|EFS72120.1| OmpA family protein [Propionibacterium acnes HL056PA1]
 gi|313840403|gb|EFS78117.1| OmpA family protein [Propionibacterium acnes HL086PA1]
 gi|314917220|gb|EFS81051.1| OmpA family protein [Propionibacterium acnes HL050PA1]
 gi|314921721|gb|EFS85552.1| OmpA family protein [Propionibacterium acnes HL050PA3]
 gi|314926563|gb|EFS90394.1| OmpA family protein [Propionibacterium acnes HL036PA3]
 gi|314931072|gb|EFS94903.1| OmpA family protein [Propionibacterium acnes HL067PA1]
 gi|314959098|gb|EFT03200.1| OmpA family protein [Propionibacterium acnes HL002PA1]
 gi|314961372|gb|EFT05473.1| OmpA family protein [Propionibacterium acnes HL002PA2]
 gi|314964584|gb|EFT08684.1| OmpA family protein [Propionibacterium acnes HL082PA1]
 gi|314969683|gb|EFT13781.1| OmpA family protein [Propionibacterium acnes HL037PA1]
 gi|314974747|gb|EFT18842.1| OmpA family protein [Propionibacterium acnes HL053PA1]
 gi|314977055|gb|EFT21150.1| OmpA family protein [Propionibacterium acnes HL045PA1]
 gi|314980286|gb|EFT24380.1| OmpA family protein [Propionibacterium acnes HL072PA2]
 gi|314985460|gb|EFT29552.1| OmpA family protein [Propionibacterium acnes HL005PA1]
 gi|314987369|gb|EFT31460.1| OmpA family protein [Propionibacterium acnes HL005PA2]
 gi|314989090|gb|EFT33181.1| OmpA family protein [Propionibacterium acnes HL005PA3]
 gi|315082724|gb|EFT54700.1| OmpA family protein [Propionibacterium acnes HL027PA2]
 gi|315086083|gb|EFT58059.1| OmpA family protein [Propionibacterium acnes HL002PA3]
 gi|315087668|gb|EFT59644.1| OmpA family protein [Propionibacterium acnes HL072PA1]
 gi|315097294|gb|EFT69270.1| OmpA family protein [Propionibacterium acnes HL038PA1]
 gi|315099483|gb|EFT71459.1| OmpA family protein [Propionibacterium acnes HL059PA2]
 gi|315102012|gb|EFT73988.1| OmpA family protein [Propionibacterium acnes HL046PA1]
 gi|315106289|gb|EFT78265.1| OmpA family protein [Propionibacterium acnes HL030PA1]
 gi|327331336|gb|EGE73075.1| putative outer membrane protein A [Propionibacterium acnes
           HL096PA2]
 gi|327333322|gb|EGE75042.1| putative outer membrane protein A [Propionibacterium acnes
           HL096PA3]
 gi|327445201|gb|EGE91855.1| OmpA family protein [Propionibacterium acnes HL013PA2]
 gi|327447284|gb|EGE93938.1| OmpA family protein [Propionibacterium acnes HL043PA1]
 gi|327450270|gb|EGE96924.1| OmpA family protein [Propionibacterium acnes HL043PA2]
 gi|327454535|gb|EGF01190.1| OmpA family protein [Propionibacterium acnes HL087PA3]
 gi|327456606|gb|EGF03261.1| OmpA family protein [Propionibacterium acnes HL083PA2]
 gi|327457118|gb|EGF03773.1| OmpA family protein [Propionibacterium acnes HL092PA1]
 gi|328755590|gb|EGF69206.1| OmpA family protein [Propionibacterium acnes HL087PA1]
 gi|328756916|gb|EGF70532.1| OmpA family protein [Propionibacterium acnes HL025PA2]
 gi|328758401|gb|EGF72017.1| OmpA family protein [Propionibacterium acnes HL020PA1]
 gi|328761148|gb|EGF74692.1| putative outer membrane protein A [Propionibacterium acnes
           HL099PA1]
 gi|332674672|gb|AEE71488.1| putative outer membrane protein A [Propionibacterium acnes 266]
          Length = 368

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|34556728|ref|NP_906543.1| motility protein MotB [Wolinella succinogenes DSM 1740]
 gi|34482442|emb|CAE09443.1| MOTB PROTEIN [Wolinella succinogenes]
          Length = 255

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 12/236 (5%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
              D K G       +  L + +        S         +   G        LEK   
Sbjct: 6   PPCDCKKGLPLWLGTFGDLMSLLLTFFILLLSMATFEKQKIEQAIGSIQGALGVLEKGQM 65

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            E        +      +   + +   A  I+         +    V  E    G ++SI
Sbjct: 66  TEIMPPKRIQALPIQQNVDTPEAINAFASMITEYSEMTKISD-GPAVKMEEAEDGFILSI 124

Query: 229 IDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFR--NIARD 283
               +  +F+  S+     E I+ L++    +   +  +   + GHTD    R     +D
Sbjct: 125 ---PSELLFESGSATITNKEGILFLKRTALEINKLSNDMHIKVIGHTDNDRLRPTATYKD 181

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           NW LS+ R  +  ++L++  V+  RIS   G        ++      + NRR+D+ 
Sbjct: 182 NWELSIARGVNVAKMLLEERVNPARISAG-GNGEFDPVASNATPEGKAKNRRVDLY 236


>gi|126663141|ref|ZP_01734139.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
           bacterium BAL38]
 gi|126624799|gb|EAZ95489.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
           bacterium BAL38]
          Length = 520

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               FD + S    E+ + L KI EVL ++  + I+I  HTD+   +     N +LS  R
Sbjct: 412 ENIYFDFNKSTVKKESELSLNKIVEVLTNNANMSITINAHTDS---KGSEAYNQKLSESR 468

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILV 338
           A +AYQ L+K G+   ++    G+    L       +   + ANRRI+  +
Sbjct: 469 AKAAYQYLLKKGIPASQL-TYKGYGESELLEKCEKCTASQDQANRRIEFKI 518


>gi|83591777|ref|YP_425529.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
 gi|83574691|gb|ABC21242.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
          Length = 340

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S+   PE   ++         + +  I + GH D          N  LS  RA 
Sbjct: 237 VFFDFDSTSITPEAGGIINTAATNAKSTGSSTIEVTGHADR---SGGDAYNLALSKRRAE 293

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +    L ++G+S  +I  +         + +        NRR+ ++++
Sbjct: 294 AVVGELERNGISRSQI-AVYAKGEADPLVPTPDGVREPQNRRVVVVLK 340


>gi|332140499|ref|YP_004426237.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550521|gb|AEA97239.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 218

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+  LPE    LQ + + L  +    + I GH         A  N RLS  RA + 
Sbjct: 110 FTSNSTDVLPEYENNLQDVIDALNANPNSGVIIHGHAS---LDGDAAYNQRLSERRAKAV 166

Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
             +L  K+ ++  RI+ + G+   R  +  +     + NRRI+
Sbjct: 167 ASLLMTKADIAPRRITAV-GYGESRPLVNEESEAANARNRRIE 208


>gi|93006335|ref|YP_580772.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92394013|gb|ABE75288.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 172

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F   SS    ++  VL +   +L  +     +  GHTD          N  L   RA 
Sbjct: 70  VYFAFDSSAITSQSAGVLNQHAGLLKSNPNAGVVIAGHTDER---GSREYNIALGERRAQ 126

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           +A   L   GV+ + I ++  +   R      ++   + NRR ++
Sbjct: 127 AARDYLAAQGVAANNI-RVISYGEERPAAAGTNEDAYAQNRRAEL 170


>gi|149910558|ref|ZP_01899197.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
 gi|149806401|gb|EDM66374.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
          Length = 196

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271
           + +  E  +  ++  +  +R+   F         E   +LQ     L  +  V   I GH
Sbjct: 73  ENLTVEEVKKQVMDELR-KRHVVYFGFDQQAVTAEYGELLQDHANFLIDNPAVKVLIEGH 131

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-- 329
            D          N  L   RA +  + L   GVS  +IS +S +   +    S    +  
Sbjct: 132 ADERGTPG---YNIALGERRANAVVKYLNNLGVSSSQISTVS-YGEEKPVNTSHTDAAFT 187

Query: 330 ANRRIDIL 337
            NRR  ++
Sbjct: 188 QNRRAVLV 195


>gi|153829691|ref|ZP_01982358.1| OmpA family protein [Vibrio cholerae 623-39]
 gi|148874812|gb|EDL72947.1| OmpA family protein [Vibrio cholerae 623-39]
          Length = 207

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 52  QKNTSVMSNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200


>gi|297580458|ref|ZP_06942385.1| OmpA family protein [Vibrio cholerae RC385]
 gi|297536104|gb|EFH74938.1| OmpA family protein [Vibrio cholerae RC385]
          Length = 207

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +     +  ++     +I   NT  F+  S+    
Sbjct: 52  QKNTSVMPNAMTQPRSASYEDLRQYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200


>gi|72161966|ref|YP_289623.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Thermobifida fusca YX]
 gi|71915698|gb|AAZ55600.1| similar to Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Thermobifida
           fusca YX]
          Length = 521

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 69/234 (29%), Gaps = 23/234 (9%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
            +  G TN+ ++Y               S     +     +  ++  +  +     +   
Sbjct: 132 PVFPGVTNEYRRYFPPLPPHVRQVTFVGSGLGAMTGIPVQDVDEERPEPENPNGGQHLSV 191

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +       K      +  +    +   + S +   +              T   IS+   
Sbjct: 192 DQPPAAGEKLTFDNRRPDEDAVAVEGWVESFVDSEI-------ASVTRDGTTETISLHSD 244

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNWRL 287
               MF+   +   PE   V+++  E L  + +       I GHTD          N  L
Sbjct: 245 ---VMFEFDRADLTPEAEAVVRRAAETLERNVDPDHPEIIIIGHTDGI---GTDAYNDDL 298

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSANRRIDI 336
           S+ RA +   +L++  +       + G               +   + NRR++ 
Sbjct: 299 SVRRAETVRNLLVEE-MGTGYTYVVEGRGSREPIAREGGPDDEQARARNRRVEF 351


>gi|238797976|ref|ZP_04641466.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
 gi|238718181|gb|EEQ10007.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
          Length = 246

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 14/142 (9%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEV 265
           + ++  +  +      +      +  P+FD +S    P T         +L    +    
Sbjct: 105 EPLLNRINRQIKIYRDIPVFSSTQMAPLFDSNSIKLKPNTQTSEMLNSLLLLVENNQGRK 164

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKI 322
           + I GH+D +     A  N  LS  RA      L++     + +     I G        
Sbjct: 165 VLIVGHSDNT---GNASLNMALSERRAQVVRDWLIQQSSLSIDD---FIIRGMGALEPVA 218

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
           ++D     S NRR+++L+  +Q
Sbjct: 219 SNDTKIGQSQNRRVEVLLLPKQ 240


>gi|197124092|ref|YP_002136043.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196173941|gb|ACG74914.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 386

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 69/268 (25%), Gaps = 16/268 (5%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           +    + G    Q  P+       D            +       +      + + I   
Sbjct: 129 DRCPDAPGPATLQGCPDADGDGVGDAEDACPAEAGPAETLGCPPAKDSDGDGVPDEIDRC 188

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
               +            +   D     D   +   E+                      D
Sbjct: 189 PLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHEQGPLENRGCPVMDADGDGVADPDD 248

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                       VA +               I++ +         +    LP + V+L +
Sbjct: 249 RCPG-----QAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAVLLDE 299

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + + L       +++  HTD       A  + RLS  RA +    L   G+  +R+    
Sbjct: 300 LAQALRDHPRLRVAVEVHTD---GAGEAAASKRLSQARAEAVRAALAGRGIEAERVEA-K 355

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVE 339
           GF       ++      + NRR +I + 
Sbjct: 356 GFGAEHPIASNKTARGRAQNRRTEIRIL 383


>gi|254228902|ref|ZP_04922324.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262396751|ref|YP_003288604.1| protein F-related protein [Vibrio sp. Ex25]
 gi|151938579|gb|EDN57415.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262340345|gb|ACY54139.1| protein F-related protein [Vibrio sp. Ex25]
          Length = 224

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281
            ++I + +Q +   F   S+    ++   ++ IG  LA  T+V  +  GH D++     A
Sbjct: 109 HLMIRLKEQVH---FQTGSAQLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAA 162

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             N  LS  RA    + L+ + +   R+    GF  +  + ++   N    NRR+++ + 
Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPQCSNSTANGKACNRRVELTLI 221

Query: 340 DRQ 342
             +
Sbjct: 222 VDE 224


>gi|260769389|ref|ZP_05878322.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
 gi|260614727|gb|EEX39913.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
          Length = 316

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD SS     +    L  + E L    +  + I GHTD++        N +LS  R
Sbjct: 210 DALSFDSSSLNATQQ--QALSTLAEKLNQQPQAQVLIIGHTDST---GSDAYNTKLSTRR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +A  VLM++ V+E RI  + G    R    +        NRR+++ +
Sbjct: 265 AQAAADVLMENQVAEHRIK-VFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312


>gi|113971301|ref|YP_735094.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113885985|gb|ABI40037.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 372

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 8/134 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++   E    ++++   L  + E    I GH
Sbjct: 237 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGH 296

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  ++L++  G+S+ R++  +G+   +  +A D     
Sbjct: 297 ASNV---GKPDYNMTLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDSKEAH 352

Query: 329 SANRRIDILVEDRQ 342
           +ANRRI+ +V   +
Sbjct: 353 AANRRIEAIVTTTE 366


>gi|188584571|ref|YP_001928016.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
           BJ001]
 gi|179348069|gb|ACB83481.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
           BJ001]
          Length = 170

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+   P     L K    L         I GH D          N+ L   R
Sbjct: 60  DRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREYNYSLGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343
           A +    L   G+S  R+  +S +   R     +D    S NRR   +++   G
Sbjct: 117 AQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRRAVSVLDGGAG 169


>gi|163854239|ref|YP_001642282.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
           PA1]
 gi|218533185|ref|YP_002424001.1| peptidoglycan-associated lipoprotein [Methylobacterium
           chloromethanicum CM4]
 gi|240141700|ref|YP_002966180.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
           extorquens AM1]
 gi|163665844|gb|ABY33211.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
           PA1]
 gi|218525488|gb|ACK86073.1| peptidoglycan-associated lipoprotein [Methylobacterium
           chloromethanicum CM4]
 gi|240011677|gb|ACS42903.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
           extorquens AM1]
          Length = 170

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 10/112 (8%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283
           +++I D+     F+  S+   P     L K    L         I GH D          
Sbjct: 55  VVNIGDR---VFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREY 108

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           N+ L   RA +    L   G+S  R+  +S +   R     +D    S NRR
Sbjct: 109 NYSLGARRAQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159


>gi|296117473|ref|ZP_06836060.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295975994|gb|EFG82785.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 380

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD---ASPFRNIARDNWRLSLDR 291
            FD   S        ++    +   +  T  I + G+TD   + P       N  LSL R
Sbjct: 272 FFDWDKSTLTERARAIVAVAAQASTSTQTTRIEVNGYTDTSASHPGPQGEHYNQELSLRR 331

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           A +    L++ GV    I  I GF      + +  +   + NRR++I++
Sbjct: 332 AQTIKAELVRDGVPGPSID-IHGFGEANPLVPTGPNTREAQNRRVEIIL 379


>gi|269955512|ref|YP_003325301.1| OmpA/MotB domain-containing protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304193|gb|ACZ29743.1| OmpA/MotB domain protein [Xylanimonas cellulosilytica DSM 15894]
          Length = 217

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 13/214 (6%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +     S QS    ++ +  +                 + E      ++           
Sbjct: 6   VGAGPASAQSTTPASASSAPTPSPDPELMQKAEAALAEQAERIEAAEITDALRADATFDL 65

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             +D    +++  +          +  ET +     +++   +  +F    S   PE   
Sbjct: 66  APEDATFALATEDATFTLRPDDSTITVETRQETEDDTVVTLTSDLLFGFGESALTPEAQA 125

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            + ++   +      + + GHTDA         N  LS  RA +   VL  SG   D + 
Sbjct: 126 AVAELATTIPQ-DAAVRVDGHTDAV---GSDELNLTLSEQRADAVAAVL--SGARPDLVL 179

Query: 311 KISGFAHHRLKIASDP-------MNSANRRIDIL 337
            + G        +++          + NRR+++ 
Sbjct: 180 TVEGHGEADPVASNEEGGVDNPAGRALNRRVEVT 213


>gi|115358236|ref|YP_775374.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115283524|gb|ABI89040.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 404

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 12/154 (7%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  LA+ +   L   VA   V+ +    +    L      R   +F    +   P    V
Sbjct: 258 LDALARNLEQRLRDEVAAGNVELIRAPGSDALTL------RFGGLFAPGDAAVAPWGASV 311

Query: 252 LQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           +   G  +A  T    + + G+ D++  R+     N  LS  RA    Q+L+ +GVS  R
Sbjct: 312 VASAGREIAVLTGSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPR 371

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           I  + G         +      + NRR+++ + D
Sbjct: 372 I-SVEGNGEADSLADNGTAAGRARNRRVEVTITD 404


>gi|323528401|ref|YP_004230553.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323385403|gb|ADX57493.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 233

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 7/149 (4%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           KE +                   LS L      + +    T  G+ I+I  +    +F+ 
Sbjct: 73  KEAVEVQPPATTANANEAAKKQLLSLLAPLQDNRQITISHTPQGVEIAINAK---VLFNS 129

Query: 240 SSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297
             +  LPE+  VL +I  VL       I + GHTD+ P        NW LS  RA +  +
Sbjct: 130 GDARLLPESFAVLGQIATVLRDRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVR 189

Query: 298 VLMKSGVSEDRISKISGFAHHRL-KIASD 325
                G+   R++ I G A +    I +D
Sbjct: 190 FFADRGIEAHRMAAI-GRADNFPLIIGND 217



 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 19 KKVAIDDTPNNLG-----SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
          K         + G      W I YAD +T LM  FL ++++    +   +      +P  
Sbjct: 14 KTGHHGHDGAHDGGEQPDRWLISYADLITTLMVLFLALYVLQLAKNSELQIKTLQHHPVK 73


>gi|262403725|ref|ZP_06080283.1| protein F-related protein [Vibrio sp. RC586]
 gi|262350229|gb|EEY99364.1| protein F-related protein [Vibrio sp. RC586]
          Length = 199

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 12/163 (7%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              +E        + L  +     + L   +  N +   +       I +S     NT  
Sbjct: 39  APQQEVTGKSTASRELSRMDHSSYADLRQFLLSNGIAHEVVPGDYPMIKVS-----NTIR 93

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+     +   L  +   LA  + +  +  GHTD +      R N +LS  RA + 
Sbjct: 94  FETGSAKVSASSKRWLDSMARFLASESGIDIVLEGHTDNT---GAERFNDKLSERRASAV 150

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
             VL++S V+++ I    GF        +      + NRR+++
Sbjct: 151 KTVLVQSRVAQNAIYT-RGFGESVPACTNSTVKGRACNRRVEV 192


>gi|189179675|dbj|BAG39456.1| outer membrane protein [Gluconacetobacter intermedius]
          Length = 405

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290
             FD   +     +  ++ +  +   H     I + G+TD S   P     + N  LS+ 
Sbjct: 296 VFFDWDGAALTGRSREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEQYNMGLSMR 355

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA S    L++ GV    I  I G+      + +  D     NRR++I++
Sbjct: 356 RADSVKAELIRDGVPASGID-IHGYGEAHPMVPTGPDTREPQNRRVEIIL 404


>gi|183222583|ref|YP_001840579.1| putative outer-membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912618|ref|YP_001964173.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167777294|gb|ABZ95595.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167781005|gb|ABZ99303.1| Putative outer-membrane protein; putative signal peptide
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 670

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +      E    L  + + L H       I GHTD          N  LS DRA S 
Sbjct: 568 FPFNERTLSDEDKKKLDLLADFLIHHKNEKVEIGGHTDNI---GNKEYNINLSEDRALSV 624

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           YQ L   GV ++R+  +  + + +    ++       NRR+
Sbjct: 625 YQYLRLKGVPKERMK-VQAYHYSQPIADNETEEGRSRNRRV 664


>gi|262371451|ref|ZP_06064767.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
 gi|262313590|gb|EEY94641.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
          Length = 159

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +F    S         L+ + + L       I + GHTD          N  LS  
Sbjct: 52  PEKLLFGFDQSDIQASQKPALEALSKQLQQYNLNKIKVVGHTDNI---GDPSYNQTLSEK 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +  Q+ +++G     I  + G    +  + +      + NRR++I++
Sbjct: 109 RASTVSQIFIETGFKTQNIQSM-GRGASQPLVENSSEENRALNRRVNIII 157


>gi|325925657|ref|ZP_08187038.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           perforans 91-118]
 gi|325543930|gb|EGD15332.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
           perforans 91-118]
          Length = 425

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS      +++       +T + +S     +  MF        P+   ++ +I   
Sbjct: 284 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGLIAQIAAA 338

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +      + + GHTD  P R+   +DN+ LS  RA +  QVL     +  R+  I G   
Sbjct: 339 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGD 397

Query: 318 HRLKI-----ASDPMNSANRRIDILVEDRQ 342
            +         ++   + NRR++IL +  +
Sbjct: 398 SQPIARPVQLPAN--RARNRRVEILFQPGE 425


>gi|307944546|ref|ZP_07659886.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
 gi|307772295|gb|EFO31516.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
          Length = 163

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F +  S    +    L K  + L   ++   ++ GH D        + N  L   R
Sbjct: 54  DRIYFAEDQSTLSSQARATLDKQVQWLNRYSQYTVTVEGHADER---GTRQYNLALGARR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA   L+  G+S  RI  IS +   R      +D   + NRR
Sbjct: 111 ANSARDYLVSRGISTTRIKTIS-YGKERPVAVCNNDSCWTQNRR 153


>gi|262278151|ref|ZP_06055936.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258502|gb|EEY77235.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 190

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 82  FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 138

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +       A   +     NRR++I
Sbjct: 139 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 180


>gi|224369398|ref|YP_002603562.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
 gi|223692115|gb|ACN15398.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
          Length = 555

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + +      + +   D+           ++ +     +       +    A       Q 
Sbjct: 347 AGAIDHSIAQPATELDATSITRPVPQPIVQDNDILNFDLASQGEDEPVAHAQTDPSLEQA 406

Query: 195 LAKKISSTLSGLVADNIVKGVLF---ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                 ++    V   ++  +             +  ++++    F  +++    + +  
Sbjct: 407 TDLFARTSPEPTVEQFLIPPLSNLSEPGFTPSTQLQPLERKVVVRFGYNNNDFTDQALKD 466

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L K    L       +S++G+TDA         N +LS  RA      L+  G   D+I 
Sbjct: 467 LTKFAGSLVAHPGAKVSVKGYTDA---NGNQTYNIKLSEFRANIVKSFLLGRGARLDQIK 523

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              G         +D       NRR++I V  +
Sbjct: 524 T-QGMGSENPIATNDTAQGRMMNRRVEIEVISK 555


>gi|110639367|ref|YP_679576.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282048|gb|ABG60234.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 712

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS  LPE    L K+ + L    ++  +  GHTD       A  N RLS  RA + 
Sbjct: 589 FDNNSSKILPEMEGDLDKVVDFLVDHPQIKLVISGHTD---GSGDAAANLRLSQARADAI 645

Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDR 341
              +M+ G + E RI  + G+ + +  I    S+     NRR++  +   
Sbjct: 646 KSYIMEKGNIDESRIEAV-GYGNQKPIIQQEVSESDRKINRRVEFELIRS 694


>gi|326329962|ref|ZP_08196276.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
 gi|325952170|gb|EGD44196.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
          Length = 253

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 79/242 (32%), Gaps = 10/242 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
            ++ + + +  ++ ++         +   +++      +  E    +     E G  +  
Sbjct: 21  TAVQDTVFRERIEDELTDKAAAALSEAGLDDVEVAFTGRDGEVTAKTEAAAVEAGALVED 80

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            + +        +  +         A+      +   +   S  +     +         
Sbjct: 81  VSGVRVVQAFGPDGAVTGEDGSGTDAVGGDSEAEATTEPEPSEPAVTAEASPTPTAEERE 140

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
                L    D+  +  F+ +S +   + + V++ +   L    +  + I GH D     
Sbjct: 141 AAQAEL----DRFRSIGFEHNSDVLTGDGLGVVKALAATLTEHPDVTVRIEGHAD---IT 193

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            +      LS  RA      L+  GV  DR+S   G+   R  +   P +  NRR++ ++
Sbjct: 194 GMLAHTQDLSERRAKRVLDTLVGLGVEADRLSS-KGYGETRPIVPGKP-DPGNRRVEFVI 251

Query: 339 ED 340
            +
Sbjct: 252 TN 253


>gi|229526017|ref|ZP_04415421.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
 gi|229336175|gb|EEO01193.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
          Length = 204

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|222102518|ref|YP_002539557.1| OmpA family protein [Agrobacterium vitis S4]
 gi|221739119|gb|ACM39852.1| OmpA family protein [Agrobacterium vitis S4]
          Length = 332

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 8/143 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   L G   +        +     +  +         F+  S+    E+   L ++ E 
Sbjct: 192 LLQILEGRAMETGEVTADAQAMSDSLAKTGHIALYGIQFETDSAALKAESDKTLAQMAEF 251

Query: 259 L-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
           L    +  + I GHTD+         N  LS  RA +  + L    G+  DR+ +  G  
Sbjct: 252 LTQDVSRKVYIVGHTDS---SGALERNMNLSQARAAAVVKALTAKFGIDSDRL-QPKGIG 307

Query: 317 HHRLKIA--SDPMNSANRRIDIL 337
            +    +  +D   + NRR++++
Sbjct: 308 PYAPAASNANDAGRAKNRRVEMV 330


>gi|21673470|ref|NP_661535.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
 gi|21646575|gb|AAM71877.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
          Length = 170

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  SS    E    L +    +  +    + I GH D          N  L   R
Sbjct: 65  GDIFFDFDSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDER---GTDEYNIALGERR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
           A +A   L+  GVS  R+S +S +   +      ++   + NRR
Sbjct: 122 AEAARMYLVNLGVSGGRLSTVS-YGEEKPFDPGHNEEAWAKNRR 164


>gi|15601417|ref|NP_233048.1| protein F-related protein [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153211953|ref|ZP_01947800.1| OmpA family protein [Vibrio cholerae 1587]
 gi|153800869|ref|ZP_01955455.1| OmpA family protein [Vibrio cholerae MZO-3]
 gi|153818096|ref|ZP_01970763.1| OmpA family protein [Vibrio cholerae NCTC 8457]
 gi|153824386|ref|ZP_01977053.1| OmpA family protein [Vibrio cholerae MZO-2]
 gi|227812226|ref|YP_002812236.1| protein F-related protein [Vibrio cholerae M66-2]
 gi|254285685|ref|ZP_04960648.1| OmpA family protein [Vibrio cholerae AM-19226]
 gi|254849820|ref|ZP_05239170.1| OmpA family protein [Vibrio cholerae MO10]
 gi|298499464|ref|ZP_07009270.1| OmpA family protein [Vibrio cholerae MAK 757]
 gi|9658075|gb|AAF96560.1| protein F-related protein [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|124117029|gb|EAY35849.1| OmpA family protein [Vibrio cholerae 1587]
 gi|124123579|gb|EAY42322.1| OmpA family protein [Vibrio cholerae MZO-3]
 gi|126511364|gb|EAZ73958.1| OmpA family protein [Vibrio cholerae NCTC 8457]
 gi|149741940|gb|EDM55969.1| OmpA family protein [Vibrio cholerae MZO-2]
 gi|150424182|gb|EDN16120.1| OmpA family protein [Vibrio cholerae AM-19226]
 gi|227011368|gb|ACP07579.1| protein F-related protein [Vibrio cholerae M66-2]
 gi|254845525|gb|EET23939.1| OmpA family protein [Vibrio cholerae MO10]
 gi|297541445|gb|EFH77496.1| OmpA family protein [Vibrio cholerae MAK 757]
          Length = 207

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 52  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200


>gi|221209716|ref|ZP_03582697.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221170404|gb|EEE02870.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 405

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  +RL        +    L  +     V         ++++   R   MF   +    P
Sbjct: 251 REAQRLSPFDALARNLEQRLRDEVAAGNVELIRDPARHVLTL---RFAGMFVPGAMTVAP 307

Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303
               V+   G  +A   E   +R  G+ D++P  +  +  N  +S  RA    ++L+ +G
Sbjct: 308 WGASVVASAGREIASIAEGAVVRVVGYADSAPAGSARQVSNQAISEARAEDVARILVAAG 367

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           V    + ++ G         +      + NRR++++V
Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403


>gi|332561151|ref|ZP_08415469.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332274949|gb|EGJ20265.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 254

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 7/207 (3%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              S + Q+   K            +    D   +   E+    P  S E       +  
Sbjct: 49  AARSGNGQARGLKLVTVDRIGPAPAVADVPDSLGAPAGEDPGLRPTASTESAPGETGRPV 108

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  L +      +        +         G+L   +       F   S++   +   +
Sbjct: 109 L-GLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPL 167

Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
           L ++  V+  S      I GHTDA         N +LSL RA    + L    G++ +R+
Sbjct: 168 LAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERL 224

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDI 336
             + G     L   SDP +  NRR++ 
Sbjct: 225 RAV-GMGERFLTNQSDPRSGENRRVEF 250


>gi|325123093|gb|ADY82616.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 186

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 78  FDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 134

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +       A   +     NRR++I
Sbjct: 135 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 176


>gi|238761919|ref|ZP_04622893.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia kristensenii ATCC 33638]
 gi|238700033|gb|EEP92776.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia kristensenii ATCC 33638]
          Length = 169

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD          +  +Q IG  L +     + + GHTDA         N +LS +R
Sbjct: 62  NKVLFDSDVRKLNASGVQTVQHIGRALHNVGINHMRVDGHTDAM---GEDGYNQKLSYER 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    L   G+    I ++ G         +      + NRR+ ++V   
Sbjct: 119 ASAVADSLAAIGIPRANI-EVHGRGKLEPVADNRTSKGRAENRRVAMIVTAP 169


>gi|332667996|ref|YP_004450784.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336810|gb|AEE53911.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 542

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 10/109 (9%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F    ++        L  + E     +   ++I GHTD       A  N +LS  RA
Sbjct: 439 RVLFAFDQAVLNEAARQELAAVAEAAKKANRYTLTIIGHTDD---AGAAEYNQQLSERRA 495

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            +        G++      I+        + +D     + NRR+++++E
Sbjct: 496 KAVADYFAAQGLTAK----IAAKGELVPAVTNDSEGNKAKNRRVEVVLE 540


>gi|308448669|ref|XP_003087717.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
 gi|308253504|gb|EFO97456.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
          Length = 189

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    +    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 81  FDYDSSDLSNDDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
              L+ +GV  +++  +S +             +   NRR++I
Sbjct: 138 ESYLITNGVKANQLEAVS-YGKEMPINTGHDEAAWKENRRVEI 179


>gi|218780334|ref|YP_002431652.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761718|gb|ACL04184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 387

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   PE + ++ K+  +L ++  +   ++GH D          N  LS  RA S 
Sbjct: 285 FDTNKADVKPEYLPLVYKVIPILNNNPGMKIELQGHADNR---GAKDYNQGLSERRAESV 341

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            ++L+  GV   R+S   G+   +  + +D   
Sbjct: 342 KKILVDKGVDAGRLST-KGWGFTKPIVPNDSEA 373


>gi|156325823|ref|XP_001618597.1| hypothetical protein NEMVEDRAFT_v1g224978 [Nematostella vectensis]
 gi|156199492|gb|EDO26497.1| predicted protein [Nematostella vectensis]
          Length = 563

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 13/143 (9%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268
           +    V        I+     + +   +D +     P ++  L  +   +  +    + I
Sbjct: 7   DNDDTVRVTIYMDEIIKIPTFEVHNIYYDYNKDELRPSSVASLDTLVNFMNDNPSLSVEI 66

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--- 325
               DA       + N  LSL RA S    L  +G+   R++   GF       A+    
Sbjct: 67  YSFADA---HGNPQYNRDLSLRRAESVMSYLETAGIERSRMTA-KGFGESMPAAANKNPD 122

Query: 326 -----PMNSANRRIDILVEDRQG 343
                     NRR ++ +    G
Sbjct: 123 GSDNPAGRQLNRRTELRIISDDG 145


>gi|51244590|ref|YP_064474.1| peptidoglycan-associated lipoprotein precursor [Desulfotalea
           psychrophila LSv54]
 gi|50875627|emb|CAG35467.1| related to peptidoglycan-associated lipoprotein precursor
           [Desulfotalea psychrophila LSv54]
          Length = 231

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVL 216
            K      + N +E Y +P +   +       ++ L  +   +  T S   A+ +     
Sbjct: 52  SKKVVAPPTGNAQEEYNIPAIPPAQDENQDYGEEDLPPVVGSLDDTDSNAAAEELASKQS 111

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
               +     SI  Q     F    ++  PE   V+ +  +VL  +    I++ G+TD  
Sbjct: 112 EAYLQQHGRSSIEFQP--VYFKFDQTMINPEMQEVIFENAQVLKRNPTLYITVEGNTDDR 169

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
                   N  L   RA +  + L+  G+ E+RI  +S     R    +    +   NRR
Sbjct: 170 ---GTNEYNMALGEKRAINVEKYLISLGIGENRIRTVS-LGEERPLFPTQTEAAYLYNRR 225

Query: 334 IDIL 337
            D +
Sbjct: 226 ADFI 229


>gi|312963035|ref|ZP_07777521.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311282804|gb|EFQ61399.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 163

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F        P +  ++Q+IG+ L     E + + GHTDA         N +LSL R
Sbjct: 56  GKVLFGSDVETLNPPSTEIVQRIGKALLGVGIERVRVDGHTDA---SGKEIYNQQLSLRR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A S   VL   G+ E  + ++ G        ++D       NRR+ I+V   
Sbjct: 113 AKSVATVLTGVGMKEQNV-QLRGLGSGEPVASNDTAAGRTENRRVSIVVIAD 163


>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 359

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N +LS
Sbjct: 231 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQKLS 287

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  ++I    G             +    +A       +RR++I 
Sbjct: 288 EKRAQSVVDYLISKGIPANKI-SPRGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 346

Query: 338 VED 340
           V+ 
Sbjct: 347 VKG 349


>gi|83854735|ref|ZP_00948265.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
 gi|83842578|gb|EAP81745.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
          Length = 176

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISST-----------LSGLVADNIVKGVLFETTRTGILI 226
           L      A  R ++ +D  + I +            +       +   V  +        
Sbjct: 8   LQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQGIPVCRRG 67

Query: 227 SIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++    N    F+  S    P+    L +  +     +    I GHTD+         N 
Sbjct: 68  NVCGVMNTDQFFNTDSYRVHPQGRARLAEFFKTTGAVS--YIISGHTDSR---ASDAYNM 122

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           +LSL+RA +   +  +SG    RI+ + G+       ++      + NRR++I+
Sbjct: 123 KLSLNRANAVASIAQQSG---ARIADVRGYGERMPAASNGTAGGMAKNRRVEII 173


>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 348

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 7/128 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271
             V     +    I+I     +  +  + +    E    LQ + + L       + + G+
Sbjct: 201 PVVNTAPPQEAKTITIEPATVSIAYGVNGNHLTAEDQQKLQPMMQRLTRYPSATVEVTGY 260

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           T  +     A  N +LS  RA +   +L +   + ++I+   G        ++D      
Sbjct: 261 TSNT---GSAAYNQKLSEKRAKNVAHLLSQYVANPNQITA-KGMGEATPVASNDTAEGRA 316

Query: 331 -NRRIDIL 337
            NRR+++ 
Sbjct: 317 ANRRVEVY 324


>gi|323945384|gb|EGB41438.1| OmpA family protein [Escherichia coli H120]
          Length = 148

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 55/94 (58%)

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +L ++  V       I I GHTDA  ++N   +NW LS DRA SA +VL ++G+ ED
Sbjct: 19  FKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPED 78

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++ ++S  A   L  A +P ++ NRRI+I+V  +
Sbjct: 79  KVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 112


>gi|254512183|ref|ZP_05124250.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535894|gb|EEE38882.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
           KLH11]
          Length = 169

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + S   P+   VLQ   + L  + + + +I GH D          N  L   R
Sbjct: 59  DRVLFAVNQSTLSPQAQTVLQGQADWLLANPDFVATIEGHADEQ---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           A +A + L+  GV+ +R++ +S +   R           S NRR   ++   
Sbjct: 116 ANAAREYLISRGVAGNRLTTVS-YGKERPIEICSTEECYSKNRRAVTVLTGS 166


>gi|170736605|ref|YP_001777865.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169818793|gb|ACA93375.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 234

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    +    L +            ++I G TD++     A  N  LS  RA + 
Sbjct: 131 FATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDST---GSAAHNRTLSEARARTV 187

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              L  +G+   R     G        ++      + NRR++I ++ +
Sbjct: 188 VNYLRSNGLQA-RSFSAEGLGAADPVASNATADGRAQNRRVEIRLDVK 234


>gi|118588324|ref|ZP_01545733.1| omp16 protein [Stappia aggregata IAM 12614]
 gi|118439030|gb|EAV45662.1| omp16 protein [Stappia aggregata IAM 12614]
          Length = 161

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 11/137 (8%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++  +    D +   V   T +  ++       +   F++  S+   +    L    + L
Sbjct: 23  AAACAQTKPDGLSSNVKPGTGQDFVVNV----GDRVFFEEDQSVLNAQGQATLANQAKWL 78

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              ++   ++ GH D        + N  L   RA SA   L+  GV+  RI  IS +   
Sbjct: 79  NRYSQYTITVEGHADER---GTRQYNIALGARRAQSARDYLVAQGVNASRIKTIS-YGKE 134

Query: 319 RLKI--ASDPMNSANRR 333
           R       +   S NRR
Sbjct: 135 RPVAVCNDNSCWSQNRR 151


>gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II
 gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae]
          Length = 241

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G+TD          N RLS
Sbjct: 122 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 178

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +I+   G             +    +A       +RR++I 
Sbjct: 179 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGNTCDNVKKRAALIDCLAPDRRVEIE 237

Query: 338 VED 340
           V+ 
Sbjct: 238 VKG 240


>gi|228018099|gb|ACP52728.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|71065468|ref|YP_264195.1| OmpA/MotB family outer membrane protein [Psychrobacter arcticus
           273-4]
 gi|71038453|gb|AAZ18761.1| outer membrane protein, OmpA/MotB family [Psychrobacter arcticus
           273-4]
          Length = 172

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F   SS    ++  VL +  ++L  +     +  GHTD          N  L   RA 
Sbjct: 70  VYFAFDSSEITSQSAGVLNQHADLLKSNPSAGVVIAGHTDER---GSREYNIALGERRAQ 126

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           +A   L   GV+ + I ++  +   R      ++   + NRR ++
Sbjct: 127 AARDYLAAQGVAANNI-RVISYGEERPAAAGTNEDAYAQNRRAEL 170


>gi|46447485|ref|YP_008850.1| peptidoglycan-associated lipoprotein precursor (pal) [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46401126|emb|CAF24575.1| probable peptidoglycan-associated lipoprotein precursor (pal)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 246

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 66/227 (29%), Gaps = 14/227 (6%)

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
              K   R  N        +  +  +     D E   D     +              PL
Sbjct: 30  EDTKSAGRHMNRGVRALGGKHGDSRQVHSKNDFECVDDEYSHQEGGFQDCDYSRADFIPL 89

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             +          L    ++    +   +                ++  +     T  FD
Sbjct: 90  QDQANNEFAMADILARQPRETPGEIGSSIPSIES------FQDPCMIPQLAAIFKTIYFD 143

Query: 239 KSSSIPLPETI-VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             SS+   +     + +I + +       I I GHTD          N  L   R+ +  
Sbjct: 144 YDSSMIKGQANLQTIHQIADFMRRHPNVYIFIEGHTDER---GPQAYNLALGSRRSNAVR 200

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
            +L+   V+ D +  IS +   R  +    +   S NRR++  + +R
Sbjct: 201 NLLISEDVNPDNLFTIS-YGKERPVVLEKHEEGWSRNRRVEFKIYER 246


>gi|320531900|ref|ZP_08032811.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135891|gb|EFW27928.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 332

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290
               F   S     +   VL  + E +        ++I GHTD          N  LS  
Sbjct: 46  GDVTFATDSDQLSAQADSVLASVVEQIKKYPSGGDLTITGHTDDV---ADDAHNQDLSER 102

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA +  + L K          +SG      ++ +D       NRR++I +   +
Sbjct: 103 RAKAVSERLKKLTDLSTWKESVSGKGESSPRVPNDTDERRQINRRVEITLTPSK 156


>gi|293609865|ref|ZP_06692167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828317|gb|EFF86680.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 188

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    E    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 80  FDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+ +GV+  ++  +S +       A   +     NRR++I
Sbjct: 137 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 178


>gi|146338272|ref|YP_001203320.1| Outer membrane lipoprotein omp16 [Bradyrhizobium sp. ORS278]
 gi|146191078|emb|CAL75083.1| Outer membrane lipoprotein omp16 precursor
           (peptidoglycan-associated lipoprotein) [Bradyrhizobium
           sp. ORS278]
          Length = 149

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K  + L        +I GH D          N  L   R
Sbjct: 41  DRVFFESDQTDLTPQAIATLEKQAQWLQSYPRYSFTIEGHADER---GTREYNIALGARR 97

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L+  G+ + R+  IS +   R     +D    S NRR
Sbjct: 98  AQSVRNFLVSRGIDQSRMRTIS-YGKERPVAVCNDISCWSQNRR 140


>gi|332300760|ref|YP_004442681.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177823|gb|AEE13513.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 296

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
            I    N   F +  +    ET  VL  + +++  + +  + I GHT           N 
Sbjct: 188 EIEKNFNAAKFVQGKADLTDETKFVLHDLAKLMEANPDLKLKIEGHTSEE---GDEAFNQ 244

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RLS +RA  A   L+  G+S DR+    G         ++P    NRR + +V
Sbjct: 245 RLSEERAQVAVDFLISQGISADRLQA-EGKGSSEPIDPNNPE--VNRRTEFIV 294


>gi|325269448|ref|ZP_08136065.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
 gi|324988369|gb|EGC20335.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
          Length = 225

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++   +  + +  V  V        + ++     +  +F  + S         L K 
Sbjct: 74  MDKVAREAAQALPNARVDKVTDANGLQCVKVTF---DSGILFPLNGSNLNVSAKNDLTKF 130

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             ++  ++     I+G+TDA         N  LS  RA S    L   GV+  +I  + G
Sbjct: 131 AGLMKRNSNCDVAIQGYTDA---SGNDNINIPLSQRRAESVSSYLKGQGVTGRQIRSVQG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILV 338
           F        +  ++ ANRR+++ +
Sbjct: 188 FGSANPI-ENKTVSQANRRVEVYL 210


>gi|323491818|ref|ZP_08096993.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
 gi|323313953|gb|EGA67042.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
          Length = 188

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 10/119 (8%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280
             +++ + D      F+  SS   P++   L  +G  LA    +  +  GH D++     
Sbjct: 71  NHVMVRLKDTIK---FNTGSSRVAPDSKYWLDMMGNYLATQPSIDIVIDGHADST---GA 124

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  LS+ RA +  Q L+ + V+ D I    G+  +    ++        NRR+++L
Sbjct: 125 PSFNDSLSMKRAKAVKQQLVNNRVAMDSIYT-RGYGEYVPACSNRTKAGKACNRRVEVL 182


>gi|294636572|ref|ZP_06714935.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
 gi|291090190|gb|EFE22751.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
          Length = 162

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F  +  +  PE+   + +IG  L+        + G+TD          N +LSL R
Sbjct: 55  EKVLFGNNQFVLRPESQAHVAEIGRALSKVAILHARLDGYTDNY---GTDAYNQQLSLKR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L   G+    ++   G         +      + NRR+ I+++  
Sbjct: 112 ADKVADALASGGMPRANLTT-RGMGKRDPIADNATRQGRAENRRVAIIIQAP 162


>gi|149370425|ref|ZP_01890114.1| putative flagellar motor protein MotB [unidentified eubacterium
           SCB49]
 gi|149355976|gb|EDM44533.1| putative flagellar motor protein MotB [unidentified eubacterium
           SCB49]
          Length = 286

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 86/248 (34%), Gaps = 7/248 (2%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
           + L      T +++        + +      +        +      ++ + +       
Sbjct: 26  VTLQGQYDETVSTLSKTQLENERLETRLTDIDEKVDSYYKRIQSLSDSNSSLEQLSNSRY 85

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            K  ++  S N +          + +     K     +   IS  L   ++  ++     
Sbjct: 86  QKMGNVVVSENDKIKMKKALADVDPVKLKNAKTLQDSMNLIISHNLKKGLSSEMMTDNDD 145

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                   + +I   +  +F+  S     +   +L+K+  ++       + + GHTD+  
Sbjct: 146 IDISIDETVVMITISDKMLFNSGSYRINAKANPLLEKLAALINSEPALEVMVEGHTDSQT 205

Query: 277 FRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSAN 331
            +  A  +DNW LS++R+ +  + L     V+ +++    G + +     +D     S N
Sbjct: 206 VKPGAIVKDNWDLSVERSTAVIRKLQDQYNVAPEKLIAA-GRSSYHPVTENDTKDGRSKN 264

Query: 332 RRIDILVE 339
           RR  I++ 
Sbjct: 265 RRTRIVIL 272


>gi|89055525|ref|YP_510976.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88865074|gb|ABD55951.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 487

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I + ++ L  +     V        +L+ +    N   F   S+    + I V  +IG+
Sbjct: 320 PIDTFIAFLQPEVDDGLVRLYREGDAVLVRV---ANAGAFGSGSAEIEDDFIDVFDRIGQ 376

Query: 258 VLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            LA     +++ GHTD    R     +N+ LS  RA +   VL++  V   R+  I G  
Sbjct: 377 ALAAEDFAVTVLGHTDNVAIRTAPFPNNYFLSRARANAVRDVLLQY-VDPVRVD-IEGQG 434

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341
             R   ++        NRR +ILV + 
Sbjct: 435 PDRPIASNITPAGQEANRRTEILVREP 461


>gi|85375559|ref|YP_459621.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
 gi|84788642|gb|ABC64824.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
          Length = 197

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR 282
           +LI +     T  F  S +   PE +  L+ + E         I+I GH+DA        
Sbjct: 54  VLIPLEPLNTTISFADSGTDLTPEAVAELETLVESRQVTEGGPITIGGHSDA---GGNDA 110

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRI 334
            N R+SL RA +    L+  GV E RI  +  F                ++   +ANRR+
Sbjct: 111 VNMRVSLRRAEAVRDWLVARGVDEGRI-TVIAFGEQNPVEPNALPDGQPNEDGRAANRRV 169

Query: 335 DILVEDRQG 343
           +I V+  +G
Sbjct: 170 EIRVDVPEG 178


>gi|283856455|ref|YP_163089.2| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|283775459|gb|AAV89978.2| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 366

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD       PE   +L  +    A + +  + + G+TD       A+ N  LS  RA 
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 314

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           S    L+  GV +D +     +    L + +        NRR++I 
Sbjct: 315 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 359


>gi|194291785|ref|YP_002007692.1| outer membrane protein; ompa/motb domain [Cupriavidus taiwanensis
           LMG 19424]
 gi|193225689|emb|CAQ71635.1| putative outer membrane protein; OmpA/MotB domain [Cupriavidus
           taiwanensis LMG 19424]
          Length = 272

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 67/250 (26%), Gaps = 8/250 (3%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                              +   +  G+   +     +   +  L  S            
Sbjct: 24  AAPGDPGTTATPAASAAAPSGRVVAGGAVPDEATKASVLARLRELYGSANVVDQIEVGNV 83

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            S           L   I +     L     +  +    +   Q              + 
Sbjct: 84  VSPPNWSGNVQKILSPQIKQVSRGQLSIDGTQVSVHGDVRNEAQRQQIASDMATGLGQSY 143

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SI 268
            +  G+    +   +L   +  R    F+  ++   P+   +L ++  VL   +     I
Sbjct: 144 TVKNGLRVPASEQNLLDQTLANRIIE-FETGAATLTPKGRAILDEMAAVLPRLSGRKIEI 202

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--P 326
            GHTD          N  LS  RA +    L+  G     ++ + G    +    +D   
Sbjct: 203 VGHTDN---SGSRALNLTLSQARAETVKNYLIGKGGEPGMLTAV-GVGPDQPVAPNDKEE 258

Query: 327 MNSANRRIDI 336
             + NRRI+ 
Sbjct: 259 GRAKNRRIEF 268


>gi|307294752|ref|ZP_07574594.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
           L-1]
 gi|306879226|gb|EFN10444.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
           L-1]
          Length = 169

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             +  +FD        +   +LQ     L  +    ++I GH D          N  L  
Sbjct: 60  SSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADER---GTRDYNIALGE 116

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339
            RA +A   L   G+   RI+ +S +   R     + +   + NRR + + V+
Sbjct: 117 RRANAAKNYLASLGIDAGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTVQ 168


>gi|238786643|ref|ZP_04630444.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia frederiksenii ATCC 33641]
 gi|238725011|gb|EEQ16650.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia frederiksenii ATCC 33641]
          Length = 168

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +FD             +Q IG+ L +     + + GHTDA+        N +LS +R
Sbjct: 61  NKVLFDSDVRKLNSSGTQTVQNIGQALHNVGINHLRVDGHTDAT---GEDSYNQKLSYER 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           A +    L   G+    I  + G         +      + NRR+ ++V 
Sbjct: 118 AAAVADSLATIGIPRTNID-VRGRGKLEPVADNRSAKGRAENRRVAMIVT 166


>gi|187925345|ref|YP_001896987.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187716539|gb|ACD17763.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 266

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +    F   S+         L +   V        +++ G+TD +    +   N +LS  
Sbjct: 158 QGNANFATDSAALSSVAKENLDRFMNVNQGVNLHRVTVTGYTDKT---GLEAHNLKLSQA 214

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA +  Q L   G+  D+     G         +        NRR+D+ V
Sbjct: 215 RAAAVMQYLRDGGLHADQFVA-RGLGSADPVAPNATAEGRTQNRRVDVRV 263


>gi|331004882|ref|ZP_08328299.1| OmpA/MotB [gamma proteobacterium IMCC1989]
 gi|330421336|gb|EGG95585.1| OmpA/MotB [gamma proteobacterium IMCC1989]
          Length = 232

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 17/158 (10%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGI---LISIIDQR----NTPMFDKSSSIPLP 246
           +L++ +    +    +   +  L +     +    +++ D R       +F  +SS    
Sbjct: 41  ELSQNLEEETAKRKMEEQRRMALEQALSDPLATGRVTLRDGRIGISGNVLFANNSSTLQE 100

Query: 247 ETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVL 299
               +L  +   L        +++ + G TD  P +       DNW LS  RA +  + L
Sbjct: 101 NGRELLNTLVAPLKIYLSEREQLLMVSGFTDDKPIQTGNLNFSDNWDLSAQRALTVTRAL 160

Query: 300 MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335
           ++ G+    +   + F   +  + +      + NRR++
Sbjct: 161 IEEGMPSSMVFAAA-FGAQQPVVPNTDRASRAKNRRVE 197


>gi|262195655|ref|YP_003266864.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262079002|gb|ACY14971.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 507

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290
           +  +F         ++   L+++   L    E   I   GH            N RLS  
Sbjct: 374 SNVLFGYDKCALSEQSHDSLREVAMTLQQHPEWGQIRIEGHASQE---GKPEYNLRLSSC 430

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +  + L+ +GV+ +R+  + GF     K ++        NRR++ +
Sbjct: 431 RAMAVRKFLIANGVAAERLQSL-GFGDTCPKFSTGTPEEMQQNRRVEFI 478


>gi|163869125|ref|YP_001610364.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
           105476]
 gi|161018811|emb|CAK02369.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
           105476]
          Length = 172

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS    +   +L +  E L H     I I GH D          N  L   R
Sbjct: 62  DRVFFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADER---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GVS  RI  IS +   R           + NRR
Sbjct: 119 AVAVRNYLVSLGVSAQRIQTIS-YGKERPVAVCDDISCWNQNRR 161


>gi|163800823|ref|ZP_02194723.1| putative outer membrane protein [Vibrio sp. AND4]
 gi|159175172|gb|EDP59969.1| putative outer membrane protein [Vibrio sp. AND4]
          Length = 212

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   SS   P     + ++ + L       I ++G+T           N  LS  RA
Sbjct: 85  RILFANDSSRIDPVFAGQISELSDFLKEYPTTSIELKGYTS---ITGTNEYNLALSKRRA 141

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            S  Q L+ +G++ +R+ +I GF  +        +   + NRR+   V   +G
Sbjct: 142 ESVRQELVNNGIAPERL-EIVGFGENNPASQGTDETSQALNRRVTASVIGYKG 193


>gi|126733574|ref|ZP_01749321.1| OmpA family protein [Roseobacter sp. CCS2]
 gi|126716440|gb|EBA13304.1| OmpA family protein [Roseobacter sp. CCS2]
          Length = 216

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S++   +    L +  + +    E    + GHTD          N  L L RA +A
Sbjct: 77  FAFNSTVLDADARSTLMRQADWIRQFPEVRFKVYGHTD---LVGSQGYNRSLGLRRAQAA 133

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G++ +R+  +  F   +  + +D     NRR
Sbjct: 134 VAFLASQGINRNRLEAVVSFGETQPLVVTDGRERRNRR 171


>gi|126725522|ref|ZP_01741364.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
 gi|126704726|gb|EBA03817.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
          Length = 170

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FD   S        +L +    L  +   ++ + GH D          N  L   R
Sbjct: 60  DRVLFDVDQSTLNDAGRTLLSQQAAWLNSNPAYMVLVEGHADEQ---GTRAYNLALGDRR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILV 338
           A +A   L+  GV   R+S ++ F   R     + +   S NRR  I++
Sbjct: 117 ATAARAYLVSQGVDASRLSTVT-FGKERPLEICSQEACYSQNRRAVIIL 164


>gi|84516634|ref|ZP_01003993.1| OmpA family protein [Loktanella vestfoldensis SKA53]
 gi|84509670|gb|EAQ06128.1| OmpA family protein [Loktanella vestfoldensis SKA53]
          Length = 218

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+I        L++  + +    E    + GHTD       A  N  L L RA + 
Sbjct: 75  FEFDSAILDSLAQATLRQQADWIRQFPEVRFKVFGHTD---LVGSAEYNRNLGLRRAQAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S DR+  +  F   +  I +      NRR
Sbjct: 132 VGYLSTQGISRDRLEAVVSFGATQPLIPTPEPERRNRR 169


>gi|298291414|ref|YP_003693353.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
 gi|296927925|gb|ADH88734.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
          Length = 202

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 13/150 (8%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
            Q L +     ++  V  ++ K  +         I++  Q     F   S I  PE+   
Sbjct: 57  AQLLRQMAEQAVANNVPLDLNKSAVAAQLFKLAQITVQIQ-----FALGSDIIRPESYAT 111

Query: 252 LQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307
           +  I + L H         I G+TD +       +N +LS  RA +  Q L+   GV   
Sbjct: 112 IGAISDALHHPILFNYHFLIVGNTDTT---GTRANNLKLSQARADAVKQALVTVFGVDPA 168

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDIL 337
           R+  + G     L+  +DP N  NRR+ + 
Sbjct: 169 RLEAV-GLGQEDLQTPNDPTNPINRRVQLF 197


>gi|34497346|ref|NP_901561.1| outer membrane protein [Chromobacterium violaceum ATCC 12472]
 gi|34103202|gb|AAQ59565.1| probable outer membrane protein [Chromobacterium violaceum ATCC
           12472]
          Length = 223

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 11/146 (7%)

Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           + +      +       G+    T    + I+I        FD +S    P    VL K+
Sbjct: 78  QHMQKQKEAMEQATKGTGIGVSQTADNRLKINIPSD---ASFDTNSYALKPSLKPVLDKL 134

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              L  +    ++I GHTD +        N  LS++RA +    L   GV  +RI  I G
Sbjct: 135 ATTLQQNPVTSVNIIGHTDNT---GSDAINNPLSVNRAKATQGYLASRGVDINRIG-IDG 190

Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338
                    +      + NRR++I V
Sbjct: 191 RGSREPVADNGTVSGRAMNRRVEIYV 216


>gi|269966185|ref|ZP_06180275.1| putative protein F-related protein [Vibrio alginolyticus 40B]
 gi|269829332|gb|EEZ83576.1| putative protein F-related protein [Vibrio alginolyticus 40B]
          Length = 224

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281
            ++I + +  +   F   S+    ++   ++ IG  LA  T+V  +  GH D++      
Sbjct: 109 HLMIRLKEHVH---FQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAE 162

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             N  LS  RA    + L+ + +   R+    GF  +  K ++   +    NRR+++ + 
Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPKCSNATASGKACNRRVELTLI 221

Query: 340 DRQ 342
             +
Sbjct: 222 VDE 224


>gi|163786795|ref|ZP_02181243.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
           ALC-1]
 gi|159878655|gb|EDP72711.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
           ALC-1]
          Length = 637

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 92/268 (34%), Gaps = 14/268 (5%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            D +  P R+    ++ + D+       + + G  +  ++  +  ++++ +   Q     
Sbjct: 367 IDGKIAPIRNVGIPVNSNADDFAFSIDEETEEGFVSSNREGGKGSDDVYAIKKLQPLCDV 426

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM----KRKKRLQDLAKKI 199
             S T   +K ++      +     +         + E +       +    L+ +    
Sbjct: 427 LVSATVLDDKTREPISGASVSLYDAEGNKVVSKTTNAEGVAEFIIECEEDTELEVVMDGF 486

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--TPMFDKSSSIPLPETIVVLQKIGE 257
            S    +   +  +  +  +      + + D+       F+   S    +    L K+ +
Sbjct: 487 DSKRVPVKGSSEEENNVQISLDPIEKLIVADKIELAPIYFEYDKSNVTAQAAFELDKLVQ 546

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           ++    +   +   T  + +   A  N RLS  RA +  Q ++  G+ E RIS + G   
Sbjct: 547 IMNKYPD--LVINATSHTDYIGSAPYNMRLSDRRAKTTVQYVISKGIDESRISGV-GKGE 603

Query: 318 HRLKIA-----SDPMNSANRRIDILVED 340
              KI      +D     NRR + ++  
Sbjct: 604 TEPKIDCGTKCTDEERQMNRRSEFIIVS 631


>gi|119383439|ref|YP_914495.1| OmpA domain-containing protein [Paracoccus denitrificans PD1222]
 gi|119373206|gb|ABL68799.1| OmpA domain protein [Paracoccus denitrificans PD1222]
          Length = 173

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +T +F    S   PE  V+L      L  +    ++  GH D          N  L   R
Sbjct: 63  DTVLFPLDQSTLTPEARVILANQAGWLNQNAGFAAVIEGHADEQ---GTREYNLALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
           A S  + L+  G++  R+  +S +   R           + NRR   +V    G
Sbjct: 120 ANSVQEYLISQGIAPGRLRTVS-YGKERPLAICSTEECFTKNRRAVTVVSPGAG 172


>gi|332297510|ref|YP_004439432.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
 gi|332180613|gb|AEE16301.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
          Length = 469

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 14/170 (8%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L + +++         D    +   ++  V +N V  V      TGI ISI + +    F
Sbjct: 287 LDEAQLVRAVGAPLKDDAYYVVMRDVAQFVYENKVPDVTITDDYTGIQISIQNLQ----F 342

Query: 238 DKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              S+  LP   + L  I E+L      +   + + GHT +           +LS++RA 
Sbjct: 343 IADSAELLPAEKLRLDTIAELLKTVTADNEFSVIVEGHTASV---GKPAGEQQLSIERAQ 399

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +    + + GV     +   GF        +      + NRR++IL+  +
Sbjct: 400 AIISAMAQRGVDTGTFTS-KGFGGTVPVGDNATPEGRAQNRRVEILIVPK 448


>gi|124005444|ref|ZP_01690285.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123989266|gb|EAY28844.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 300

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 85/286 (29%), Gaps = 8/286 (2%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
            + +K + Q         +  S+  + E     R    +    ++     ++      + 
Sbjct: 17  KNQRKGLSQSELKEIALDLGMSEAEWREVQNVARGHIERGYNFLEHQNEDDAQKEFEQAL 76

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
                       + ++   +     K +    + K       TD   +       +L   
Sbjct: 77  LVFPDDAPALYGVAHIHERRFMAKGKAADKETALKYAHAALQTDPAHTEAARLISYLKDQ 136

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                    RK     L   + + +       I   +                 +   F+
Sbjct: 137 KPITTWHKVRKPVFLLLVLAVLAGVVYKYQGKIKTEIDHIKEAFQARKGAQFVLHEVYFE 196

Query: 239 KSSSIP-LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             S+      +   L ++   L    +    I GHTD +     A  N ++S  RAYS Y
Sbjct: 197 SGSTELHDARSEEELMRLVSFLKKHPKLKGEIAGHTDNT---GRAAANLQISTQRAYSVY 253

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           + L K+GV   ++    G+   R K  ++       NRRI+  +  
Sbjct: 254 KYLTKNGVKPAQLI-YRGYGATRPKFPNNNPVNRRKNRRIEFKILK 298


>gi|86132374|ref|ZP_01050968.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85816935|gb|EAQ38119.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 650

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 12/114 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD       P+  + L+K+  V+     + I +R HTD+         N  LS  R
Sbjct: 538 NPIYFDFDRFNIRPDAALELEKVLAVMREYPNMVIDVRSHTDSR---GNDSYNLSLSDKR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILV 338
           A S    ++  G+S  RI    G+   +L    ++     +  +  NRR + +V
Sbjct: 595 AKSTVNYIIAEGISSSRI-SGRGYGETQLTNECSNGVQCSEEAHQLNRRSEFIV 647


>gi|86130800|ref|ZP_01049399.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818211|gb|EAQ39371.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 632

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 79/277 (28%), Gaps = 10/277 (3%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               +    +      QN     +    D SI  +   ++  +       K         
Sbjct: 360 DVFMSESKGANTYAIPQNAGTGINSPADDFSIYINQDTDTGFISSNRAGGKGGDDIYILG 419

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                +   +    N      +K   +  +T    S +         L + K        
Sbjct: 420 QLPPCDVDVALTVVNPAGEGIDKALVIVNNTTDNTSESDTATTTGKYLYQSKCNRTYTIT 479

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
              D  K+ +  ++   +       L       ++       N   FD   S   P    
Sbjct: 480 ASADGYKEANQNITVGKSGMSQTITLEPIIDQVVVTETEVVLNPIYFDFDKSNIRPSAAA 539

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L ++  V+     + IS   HTD    R     N  LS  RA S    ++  G++  RI
Sbjct: 540 ELDRLVNVMKQYPTMVISAESHTD---IRGSESYNKNLSQRRADSMRDYVVSKGINASRI 596

Query: 310 SKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341
           S I G       IA     ++  +  NRR    +  R
Sbjct: 597 SSI-GKGESEPAIACGTNCTEDEHQLNRRSVFKIVTR 632


>gi|241761684|ref|ZP_04759771.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373992|gb|EER63525.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 363

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD       PE   +L  +    A + +  + + G+TD       A+ N  LS  RA 
Sbjct: 255 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 311

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           S    L+  GV +D +     +    L + +        NRR++I 
Sbjct: 312 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 356


>gi|307720703|ref|YP_003891843.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306978796|gb|ADN08831.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
          Length = 180

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 10/162 (6%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI--LISIIDQRNTPMFDKSS 241
                +K+ +++A  +   +  +  + +        + T    + +I  +  T  FD   
Sbjct: 22  KEPAVQKKTEEVASPVVQEVEAVTTETVASENSTINSSTNELSMNAIESKLPTIYFDFDK 81

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
               PE    +    E+     +  S+   G+ D          N+ L L RA +  + L
Sbjct: 82  YNIKPEMQERIDAAAELGKTGAKAFSVKLEGNCDEW---GSDEYNFALGLKRANAVKKAL 138

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           +  G+   RIS +S +               + NRR++  + 
Sbjct: 139 VADGIDPSRISMVS-YGESNPVCTEHTRACWAKNRRVNFKLL 179


>gi|260752248|ref|YP_003225141.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551611|gb|ACV74557.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 366

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD       PE   +L  +    + + +  + + G+TD       A+ N  LS  RA 
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYSQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 314

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           S    L+  GV +D +     +    L + +        NRR++I 
Sbjct: 315 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 359


>gi|227873541|ref|ZP_03991786.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227840631|gb|EEJ51016.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 385

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            S+  +   G    +   +      ++                    + +L  +I+  L+
Sbjct: 47  RSIFPNGRPGDKSAEQIIINGQATNKDEPAGEIGDSGAPENTVDPNNINELYLQIAQALN 106

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
           G   D     V     +    +   D+     F   SS+  P+    L    + +A    
Sbjct: 107 GAGIDG----VEVSRGQDYTFVVFKDK---AFFAGDSSVITPQGQETLSIFCDTIAPDAN 159

Query: 265 ---VISIRGHT-DASPFRNIARDNWR-LSLDRAYSAYQVLMKSGV-SEDRISKISGFAHH 318
               +++ GHT  A P R     N R LS+ RA      +   G+ S D++  I G+   
Sbjct: 160 KLSQVNVMGHTAQADPERANNPRNDRILSVMRAAEVCLFIQGRGIISPDKLVSI-GYGQF 218

Query: 319 RLKIASDP--MNSANRRIDILV 338
                +      + NRR++IL+
Sbjct: 219 HPIADNATSEGRAKNRRVEILL 240



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 57/192 (29%), Gaps = 11/192 (5%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP---------- 71
                 +  GSW   Y D +T+LM FF++++ +++ D        +   P          
Sbjct: 2   KKRGGGDEGGSWMDTYGDLVTLLMTFFVLLYSMSSIDSAKWDVFVRSIFPNGRPGDKSAE 61

Query: 72  -FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
               N    +K     +     + +N +D +    +         G+     +  R ++ 
Sbjct: 62  QIIINGQATNKDEPAGEIGDSGAPENTVDPNNINELYLQIAQALNGAGIDGVEVSRGQDY 121

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            F +   +      +S+     +         +    NK     +   + +         
Sbjct: 122 TFVVFKDKAFFAGDSSVITPQGQETLSIFCDTIAPDANKLSQVNVMGHTAQADPERANNP 181

Query: 191 RLQDLAKKISST 202
           R   +   + + 
Sbjct: 182 RNDRILSVMRAA 193


>gi|254510529|ref|ZP_05122596.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
 gi|221534240|gb|EEE37228.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
          Length = 208

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        +L +  + +    E    + GHTDA      +  N RL   RA +A
Sbjct: 65  FAFDSAQLDASAQRILLQQADWIKQFPEVRFRVYGHTDAV---GTSAYNKRLGQRRANAA 121

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L + G+S  R+  +  F   R  +A+   +  NRR
Sbjct: 122 VAFLTQQGISRSRLEAVVSFGKSRPLVATPDRDRRNRR 159


>gi|113461178|ref|YP_719247.1| hemagglutinin antigen [Haemophilus somnus 129PT]
 gi|112823221|gb|ABI25310.1| hemagglutinin antigen [Haemophilus somnus 129PT]
          Length = 355

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 ++  +    +   F  +     PE    L  +   +A      +S+ G+TD   
Sbjct: 223 PVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRI- 281

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-------- 328
                  N +LS  RA +    L+  GV++D IS + G+        +            
Sbjct: 282 --GSDASNLKLSQRRADTVANYLVSKGVAQDAISAV-GYGEANPVTGAKCDAVKGRKALI 338

Query: 329 ---SANRRIDILVEDRQ 342
              + +RR++I V+  +
Sbjct: 339 ACLAEDRRVEISVKGSK 355


>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
          Length = 355

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 227 KSDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +            +RR++I 
Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGESNPVTGNTCDSVKGRQALIDCLSPDRRVEIQ 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
 gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
 gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
          Length = 355

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 227 KSDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +            +RR++I 
Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGESNPVTGNTCDSVKGRAALIDCLSPDRRVEIQ 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|254502312|ref|ZP_05114463.1| OmpA family protein [Labrenzia alexandrii DFL-11]
 gi|222438383|gb|EEE45062.1| OmpA family protein [Labrenzia alexandrii DFL-11]
          Length = 190

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           II+      FD+ S+    E  + L    + L  +    + ++GH D             
Sbjct: 69  IINVGRRIYFDRGSATVSDEAKMTLDNQAKWLKQNKSWLVKVQGHADD---PGSEAAQKT 125

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
           LS  RA + Y  L++ GV+  R+  + G+   R     D     S NRR+ + + +
Sbjct: 126 LSTQRATAVYNALIERGVNAKRMW-VKGYGVERPVTDCDAVTCQSQNRRVVVNLRE 180


>gi|239815674|ref|YP_002944584.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
 gi|239802251|gb|ACS19318.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
          Length = 172

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                FD  S    PE   ++      L  + +   SI GHTD          N  L   
Sbjct: 65  ERIVYFDYDSYTVKPEFQSLIDGHARFLKANPQRRVSIEGHTDDR---GGREYNLALGQK 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           R+ +  + L   GVS+ +I  +S F   +  +  + +   + NRR +I
Sbjct: 122 RSEAVRRALTLLGVSDAQIEAVS-FGKEKPAVQGSGEEAWAQNRRAEI 168


>gi|332978389|gb|EGK15109.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. 1501(2011)]
          Length = 170

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           R+   F   SS    E   +L +    LA   +  + + GHTD          N  L   
Sbjct: 65  RSIVRFPFDSSEIDAEAASILNEQVAFLASHPDARVLVAGHTDER---GSREYNHALGER 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +    L   GV++ R+  IS +   R       +  ++ NRR ++
Sbjct: 122 RAQAVRNYLASQGVTDARVETIS-YGEDRPVAAGTDEASHAQNRRAEL 168


>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
 gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
          Length = 361

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 17/123 (13%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLD 290
           +  +F    +   PE    L  + + +     + S+   G+TD        + N +LS +
Sbjct: 237 SDVLFAFGKANLKPEAAQSLDNLQQEITKVGSLSSVEVAGYTDRI---GSDKYNQKLSQE 293

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVE 339
           RA +    L+   +S D I  + G+        +               + +RR+++ V 
Sbjct: 294 RANTVANYLVSKSISPDVIKAV-GYGEANPVTGNTCDAVKGRKALIACLAPDRRVEVSVS 352

Query: 340 DRQ 342
            +Q
Sbjct: 353 GQQ 355


>gi|190895276|ref|YP_001985569.1| hypothetical protein RHECIAT_PC0000949 [Rhizobium etli CIAT 652]
 gi|190700937|gb|ACE95019.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
 gi|327193548|gb|EGE60440.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 441

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 8/121 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASP--FRNIAR 282
           ++      +F  +          ++  I  VL  +      I+I GHTD  P    N   
Sbjct: 321 LLQSSTPELFQSARPELTKGFEPLVASIATVLKQNAELIGGITITGHTDNVPLQASNPLS 380

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           +N RLS  RA +   +L  SGV   ++    G A       +D     +ANRRI+IL++ 
Sbjct: 381 NNQRLSEARAATIASLLAASGVPAGQLKS-QGRAATEPLAGNDSREGRAANRRIEILIQK 439

Query: 341 R 341
           R
Sbjct: 440 R 440


>gi|262371750|ref|ZP_06065029.1| outer membrane protein A [Acinetobacter junii SH205]
 gi|262311775|gb|EEY92860.1| outer membrane protein A [Acinetobacter junii SH205]
          Length = 346

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S   P+    + K+ E LA        I GHTD +      + N RLSL RA
Sbjct: 227 RVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIEGHTDNT---GPRKLNERLSLARA 283

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    +        NRR+
Sbjct: 284 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 327


>gi|227540101|ref|ZP_03970150.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239962|gb|EEI89977.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 671

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I        +D   S    +   VL ++   L  +    I +  HTD+      A+ N +
Sbjct: 554 ISFTLENIYYDLDKSNIREDAKPVLNQLVHTLRDNPSLKIELSSHTDSR---ATAKYNMK 610

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------ASDPMNSANRRIDILVE 339
           LS +RA SA   ++  G++ +RI    G+   RL          +D  + ANRR +I V 
Sbjct: 611 LSQNRAQSAVDYIVSQGIARNRIIA-KGYGESRLINMCKDGVKCTDAEHQANRRTEIKVL 669

Query: 340 D 340
           +
Sbjct: 670 E 670


>gi|221369495|ref|YP_002520591.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
 gi|221162547|gb|ACM03518.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 254

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 6/211 (2%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +      +          +T D                    E+  L P +       +
Sbjct: 44  RDAFAAARSGNGQARGLKLVTVDRIGPAPAVADVPNSLGAPAGEDPGLRPTASTDGAPGE 103

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             + +  L +      +        +         G+L   +       F   S++   +
Sbjct: 104 TGRPVLGLPQGADRLAAADPPPEGRETAEVTPESFGLLDPALQVNVRIHFAFDSAVLASD 163

Query: 248 TIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
              +L ++  V+  S      I GHTDA         N +LSL RA    + L    G++
Sbjct: 164 QTPLLAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIA 220

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +R+  + G     L   SDP +  NRR++ 
Sbjct: 221 PERLRAV-GMGERFLTNQSDPRSGENRRVEF 250


>gi|149202036|ref|ZP_01879009.1| OmpA domain protein [Roseovarius sp. TM1035]
 gi|149144134|gb|EDM32165.1| OmpA domain protein [Roseovarius sp. TM1035]
          Length = 635

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 9/169 (5%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGILISIIDQRNTPM 236
           +  K  + +  + L +   +       +     +  V  L         I+ I       
Sbjct: 439 TGRKTASAEIAQFLAEKLGEAEQYSIDVTYKEALDPVAGLPTPEECEAQIAGIQAERKIN 498

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+    +   ++  I +VL    E  + I GHTD+         N +LSL RA + 
Sbjct: 499 FEPGSAKIDAQGAAIMDDIADVLKKCGEVRMEIGGHTDSQ---GGEDMNAQLSLSRARAV 555

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L    V    I    G+        ++       NRRI+  +   +
Sbjct: 556 LDELRMRRVLTSSIDA-KGYGESVPIADNETEEGRETNRRIEFRLIRPE 603


>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 351

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 75/225 (33%), Gaps = 19/225 (8%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP-PLSKEKILAMKRK 189
           + + ++   +   K      ++ G     +  +E ++NK+    L          A +  
Sbjct: 121 MVWRADGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFVSNIGDANETA 180

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            R  +    +  T      +              +       ++  +F+ + +   P+  
Sbjct: 181 ARPDNTLLSVGVTYRFGQDEAAPAPAPAPAPAPVVETKRFTLKSDVLFNFNKATLKPQGQ 240

Query: 250 VVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             L ++   L++       + + G+TD        + N +LS  RA S    L+  G+  
Sbjct: 241 QALDQMYAQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLSEQRAQSVVDYLVSKGIPA 297

Query: 307 DRISKISGFAHHRLKI----ASDPMNSA-------NRRIDILVED 340
           D+IS   G             +    +A       +RR++I V+ 
Sbjct: 298 DKISA-RGMGKADPVTGSTCDNVKARAALIECLAPDRRVEIEVKG 341


>gi|254700357|ref|ZP_05162185.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
 gi|261750850|ref|ZP_05994559.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
 gi|261740603|gb|EEY28529.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
          Length = 168

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPANRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167


>gi|78485827|ref|YP_391752.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78364113|gb|ABB42078.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
          Length = 187

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +   V++   + +A + + +++++G+ D          N  L   RA + 
Sbjct: 87  FEFDRSEVQSQFYDVIKMNADYMALNDSAMVTVKGYCDER---GTREYNLALGERRANAV 143

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
              L+  GVS  RI+ +  F          ++   + NRR + 
Sbjct: 144 KNALVAEGVSPSRIN-VISFGEENPVDPAHNEAAWAKNRRAEF 185


>gi|182680300|ref|YP_001834446.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636183|gb|ACB96957.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 172

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  SS         L K    L        +I GH D          N+ L   R
Sbjct: 63  DRVFFESDSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADER---GTREYNFALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333
           A +A   L+  G++  R+  IS +   R     D     S NRR
Sbjct: 120 AEAAKNYLVARGIATSRLRTIS-YGKERPVATCDDISCWSQNRR 162


>gi|167839008|ref|ZP_02465785.1| hypothetical protein Bpse38_20639 [Burkholderia thailandensis
           MSMB43]
          Length = 560

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +   P+ +  ++++G 
Sbjct: 336 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 393

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L  + +            
Sbjct: 394 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQ 453

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 454 RSIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 485


>gi|42524180|ref|NP_969560.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
 gi|39576388|emb|CAE80553.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
          Length = 214

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           I   ++  +FD   +   P     + ++  ++      +++++G+TD +        N  
Sbjct: 95  ITKLKSDILFDTGKADLKPAAQTNINQLAAIMKKYPENILTVKGYTDDT---GSQMVNNP 151

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA +    L+ +GV    ++ I G         +      + NRR++I +   +
Sbjct: 152 LSEQRAKAVSAQLVAAGVPAQTVTSI-GMGALNPVDPAKTKEARAKNRRVEIEITVDE 208


>gi|315181920|gb|ADT88833.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
          Length = 316

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD SS     +    L+ +   L    +  I I GHTD++        N +LS  R
Sbjct: 210 DALSFDSSSLNATQQ--QALRTLAATLNKQPQAQILIIGHTDST---GSDAYNTKLSTRR 264

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +A  VLM++ V+E RI  + G    R    +        NRR+++ +
Sbjct: 265 AQAAADVLMENQVAEHRIK-VFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312


>gi|315453876|ref|YP_004074146.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
           49179]
 gi|315132928|emb|CBY83556.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
           49179]
          Length = 227

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 8/207 (3%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            ++ S+  K+    + ++                +E+      + +     + K+     
Sbjct: 23  GAKPSKPPKSQSAENVQEQPTQSVKNTTVHPEGVQESTPAKSQTPQTSPISQTKEGQPGT 82

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQ 253
           A ++ +  +   A+   + V                       FD       P+    + 
Sbjct: 83  AHELETQNAQKNANATSETVPAPQEPQSEQEQFKSGEIVGQVYFDFDKYNVRPDMQDAVD 142

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  + +  S   + + G+TD          N+ L   RA S  + L+  G+++D I  IS
Sbjct: 143 QGAQKIQDSKMKVLLEGNTDEF---GTGEYNFALGNKRALSVKEALVVKGIAQDNIRTIS 199

Query: 314 GFAHHRLKIASDPMN--SANRRIDILV 338
            F   +             NRR+DI V
Sbjct: 200 -FGESKPICLEKTKECYQKNRRVDIKV 225


>gi|328953892|ref|YP_004371226.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
           11109]
 gi|328454216|gb|AEB10045.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
           11109]
          Length = 191

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I  +     F+        E+  +LQK    L    E  I+I GH D    R  +  N  
Sbjct: 76  IAFESEDVFFEYDQFTLTSESRSLLQKKASFLQKHPEIQITIEGHCD---IRGSSDYNLG 132

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA SA   L   G++ +R+S IS +   +     D     + NRR
Sbjct: 133 LGQKRADSAKSYLQDLGIAGNRLSTIS-YGKEQPVAHGDTEEAHARNRR 180


>gi|254465277|ref|ZP_05078688.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206686185|gb|EDZ46667.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 172

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F        P     LQ     LA + +  ++I GH D          N  L   R
Sbjct: 62  DRVLFAIDQHTLSPAAQATLQGQARWLAQNGDYAVTIEGHADEQ---GTREYNLGLGAKR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A + L+  G+S  RI  +S +   R     + +   S NRR
Sbjct: 119 ANAAREYLISQGISGSRIKVVS-YGKERPLEICSDETCYSKNRR 161


>gi|332666217|ref|YP_004449005.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335031|gb|AEE52132.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 595

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 10/147 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + + S LS   ++              I  ++  +     F   SS   P    V++++ 
Sbjct: 450 RFLKSVLSRAGSNIASADEAEFNADDNIRETVSKKSWAIEFASGSSEFTPSARAVMEQLF 509

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGVSEDRISKI 312
             L  ++   + + GHTD          N  LS  RA++    L     +   E R+  I
Sbjct: 510 NDLVIASNLKVEVHGHTDNI---GDPAANLSLSERRAFAIKTWLENKSANNFPEGRV-SI 565

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
                     ++D     + NRR++I+
Sbjct: 566 FSHGASNPVASNDTPAGRAKNRRVEII 592


>gi|307826489|ref|ZP_07656672.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307732463|gb|EFO03357.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 238

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 10/236 (4%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
                  +  +        + +  Q    +        + K L +S   +    +     
Sbjct: 5   TPPKKTNEGLELKHTQSPAVDDGLQPPITQLQGEVTQNQAKGLTESAQNKGLELEPTQSP 64

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           +   S+  I   + +           S      +         + +     +S++     
Sbjct: 65  IDEGSQSAITQPQGEVTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL-VLGG 123

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-----NWRLS 288
             F      P       +  I  ++     + + + GH D       +       N  +S
Sbjct: 124 GFFSSGQITPRANIQDAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENIS 183

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           L RA +  QVL K G++ DRI  + G        ++   +    NRR++I +   Q
Sbjct: 184 LRRANAIAQVLKKKGIASDRII-VHGLGDTVPLASNLTYDGRMKNRRVEIKLLPAQ 238


>gi|293392950|ref|ZP_06637267.1| OmpA family protein [Serratia odorifera DSM 4582]
 gi|291424484|gb|EFE97696.1| OmpA family protein [Serratia odorifera DSM 4582]
          Length = 165

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P +   +QK+G  L         + GHTD          N RLSL R
Sbjct: 59  DKVLFGNNIGKLNPASTETVQKMGRALLSVDIVKFRLDGHTDNY---GEDSYNDRLSLRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           A +   +L   G+    I    G         +      + NRR+ I+V 
Sbjct: 116 ANAVADLLASVGIPRANIET-RGRGKRDPVADNRTASGRAENRRVSIIVT 164


>gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae]
          Length = 240

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G+TD          N RLS
Sbjct: 121 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 177

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +I+   G             +    +A       +RR++I 
Sbjct: 178 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIE 236

Query: 338 VED 340
           V+ 
Sbjct: 237 VKG 239


>gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae]
          Length = 241

 Score = 84.2 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G+TD          N RLS
Sbjct: 122 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 178

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+   +I+   G             +    +A       +RR++I 
Sbjct: 179 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIE 237

Query: 338 VED 340
           V+ 
Sbjct: 238 VKG 240


>gi|329944219|ref|ZP_08292478.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530949|gb|EGF57805.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 464

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSL 289
                F+  S     +   VL  + E +        ++I GHTD          N  LS 
Sbjct: 178 DGDVTFEVDSDQLSAQADAVLANVVEQIKKYPSGGDLTITGHTDDV---ADDAHNQDLSE 234

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            RA +    L K          +SG      ++ +D      ANRR++I +   +
Sbjct: 235 RRAKAVSSRLKKLTDLSTWNESVSGKGESSPRVPNDSDEHRQANRRVEITLTPSK 289


>gi|240851216|ref|YP_002972619.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
 gi|240268339|gb|ACS51927.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
          Length = 173

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS    +   +L +  E L H     I I GH D          N  L   R
Sbjct: 63  DRVFFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADER---GTREYNLALGQRR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GVSE RI  IS +   R           + NRR
Sbjct: 120 AVAVRNYLVSLGVSEQRIQTIS-YGKERPVAVCDDISCWNQNRR 162


>gi|149202853|ref|ZP_01879824.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
 gi|149143399|gb|EDM31435.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
          Length = 172

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    +    L      L  + +  ++  GH D          N  L   R
Sbjct: 62  DRVLFAVDQSTLGSDAQATLDGQANWLTTNRDFTAVIEGHADEQ---GTREYNLALGARR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  GVS +R+ ++  +   R     +++   + NRR
Sbjct: 119 ANAVQEYLIGRGVSPNRL-RVVSYGKERPIEICSNEACYAKNRR 161


>gi|256424251|ref|YP_003124904.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256039159|gb|ACU62703.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 613

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 12/113 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + +   P    VL  + + +  + +    +  HTD+         N  LS  RA S 
Sbjct: 505 FDFNKAAINPAAAQVLDGLVKTIQENPDKSVELSAHTDSR---GNDAFNLALSQKRATSV 561

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
              L+  GV++ RIS   G+   +L          S+  +  NRR +  +  +
Sbjct: 562 MNYLISKGVAKSRISA-KGYGETKLLNRCGNGVNCSEDEHKLNRRTEFKLVKK 613


>gi|37704612|gb|AAR01578.1| OprF [Pseudomonas sp. MFY59]
 gi|37704620|gb|AAR01582.1| OprF [Pseudomonas sp. MFY68]
 gi|37704662|gb|AAR01603.1| OprF [Pseudomonas sp. MFY161]
          Length = 318

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 212 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 271

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL +  G+   R+  + G+   R   
Sbjct: 272 DSV---GPDAYNQKLSERRANAVKQVLTQQYGIESSRVDSV-GYGETRPVA 318


>gi|89068039|ref|ZP_01155456.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
 gi|89046278|gb|EAR52335.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
          Length = 173

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F        PE   VL      L  + +  ++  GH D          N  L   R
Sbjct: 61  DRVLFLVDQYTLTPEGRAVLDGQARWLQANADYRAVIEGHADEQ---GTREYNLALGSRR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343
           A +  + L+  GV   R+  ++ +   R     +++   + NRR   ++    G
Sbjct: 118 ANAVREYLVSQGVPSSRLQTVT-YGKERPLEVCSAESCYAQNRRAVTVIAAGSG 170


>gi|86132229|ref|ZP_01050824.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85817148|gb|EAQ38331.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 674

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +        FD        ++ VVL ++   L     + + I+ HTD+         N  
Sbjct: 558 LFIDVAPIYFDFDLYSIREDSQVVLDELAAKLIKYKRIKMKIQSHTDSR---GPEAYNVP 614

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVED 340
           LS +RA + +  L++ G+   RI +  G+ + +  +       ++  +  NRR +  +  
Sbjct: 615 LSQNRAKATFDYLVEKGIDPTRI-QYQGYGNSQPVVECPAGQCTEEEHQLNRRSEFEITG 673


>gi|104779940|ref|YP_606438.1| outer membrane lipoprotein [Pseudomonas entomophila L48]
 gi|95108927|emb|CAK13623.1| putative outer membrane lipoprotein (OmpA domain) [Pseudomonas
           entomophila L48]
          Length = 166

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287
            D     +F          +  ++++IG+ L     + + I GH DA      A  N +L
Sbjct: 55  FDLSGKVLFGSDLDSLNSASESIVERIGKALLSVDIQRVRIDGHADA---SGKAAYNQQL 111

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V   
Sbjct: 112 SERRAQSVAKALIGIGMQPQNIQT-RGLGSSQPVADNRTSTGRMENRRVSIVVASD 166


>gi|218887300|ref|YP_002436621.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758254|gb|ACL09153.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 307

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 17/153 (11%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L  ++ ++  + + ++       I I    +  +F   ++        +L +I  VL   
Sbjct: 95  LRDMLWEDAERDINYQENGY---IQIFSINDEVLFRTGATELTERGAALLARIAPVLRGV 151

Query: 263 TEVISIRGHTDASP--------FRNIARD---NWRLSLDRAYSAYQVLMKSGVSEDRISK 311
              + + GH   +          R   +     WRLSL RA + Y+ L   GV   R+  
Sbjct: 152 EHPVLVAGHASPARDEEGILFRLRGDEKTLPTPWRLSLGRATAVYRRLADLGVPRGRML- 210

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           I      R +  +        NRR+DI+++ R 
Sbjct: 211 IEAHGDTRPRFDNLTPEGRRANRRVDIVLDRRN 243


>gi|70734242|ref|YP_257882.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68348541|gb|AAY96147.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 164

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F          +  ++Q+IG+ L     + + + GHTDA         N +LS+ R
Sbjct: 57  GKVLFGSDVETLNQASTEIVQRIGKALLSVDIQKVRVDGHTDA---SGKEAYNVQLSVRR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A S  +VL + G+ E+ I ++ G        ++  +     NRR+ I+V   
Sbjct: 114 AKSVVKVLTQVGMREENI-QLRGLGSSEPVASNSTVAGRTENRRVSIVVIAD 164


>gi|49474668|ref|YP_032710.1| peptidoglycan-associated lipoprotein [Bartonella quintana str.
           Toulouse]
 gi|49240172|emb|CAF26636.1| Peptidoglycan-associated lipoprotein [Bartonella quintana str.
           Toulouse]
          Length = 172

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   SS   P+   VL +  + L  H +  I I GH D          N  L   R
Sbjct: 62  DRVFFSLDSSSIEPDAEAVLIRQAQWLLRHPSYSIVIEGHADER---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L+  GVS  R+  IS +   R           + NRR    + +  G
Sbjct: 119 AVAVRNYLISLGVSSQRMQTIS-YGKERPVAVCDDISCWNQNRRAVTKINNMNG 171


>gi|86130725|ref|ZP_01049325.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85819400|gb|EAQ40559.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 649

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 12/148 (8%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           LSG + + +      +  + G  I+ I   N   FD       P+  + L K+   +   
Sbjct: 506 LSGEIQEFLQLERAVQIAKPGDDIAKILNLNPIYFDFDKYYIRPDAEIELAKVLVYMETY 565

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I +R HTD+         N  LS +R  S    L+  G++  R+    G+   +L 
Sbjct: 566 PSVRIDVRSHTDSR---GNDEYNRTLSQNRNVSTRDWLIAKGINPSRL-SGRGYGESQLV 621

Query: 322 I--AS-----DPMNSANRRIDILVEDRQ 342
              ++     +  +  NRR + +V    
Sbjct: 622 NECSNGVQCSEEQHQLNRRSEFIVLSNN 649


>gi|260770556|ref|ZP_05879489.1| protein F-related protein [Vibrio furnissii CIP 102972]
 gi|260615894|gb|EEX41080.1| protein F-related protein [Vibrio furnissii CIP 102972]
 gi|315181629|gb|ADT88542.1| OmpA family protein [Vibrio furnissii NCTC 11218]
          Length = 209

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPF 277
                +++ + D      FD  SS    ++   L  +G  L       I I GHTD +  
Sbjct: 89  MPGNHVMVKLKDTVK---FDTGSSNVSQDSAYWLSVMGSFLSRERGIDIVIDGHTDNT-- 143

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
               R N  LS+ RA      L+   V+ D I    G+  +     +        NRR++
Sbjct: 144 -GKPRFNDALSVKRAQMVKNTLINKNVARDAIYT-RGYGEYVPACNNGTYEGRACNRRVE 201

Query: 336 IL 337
           +L
Sbjct: 202 LL 203


>gi|86142013|ref|ZP_01060537.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like [Leeuwenhoekiella blandensis MED217]
 gi|85831576|gb|EAQ50032.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like [Leeuwenhoekiella blandensis MED217]
          Length = 435

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+   P +   +++I + +   +T    I GHTD+         N  LS  RA + 
Sbjct: 333 FDSGSASIQPASYASIKQIAQAIQSDATGNYLITGHTDSD---GDVALNMPLSESRAEAV 389

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
              L+   G+   R+    G          +     + NRR+ I
Sbjct: 390 KAALVSEFGIDSSRLQTA-GKGSSEPVSTENTVTAKALNRRVTI 432


>gi|254714557|ref|ZP_05176368.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
 gi|254717454|ref|ZP_05179265.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
 gi|261219284|ref|ZP_05933565.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
 gi|261322345|ref|ZP_05961542.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
 gi|260924373|gb|EEX90941.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
 gi|261295035|gb|EEX98531.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
          Length = 168

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167


>gi|330752331|emb|CBL87285.1| protein with similarity to outer membrane OmpA family protein
           [uncultured Flavobacteria bacterium]
          Length = 266

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 6/147 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K I +    L  +  +     +     ++     +    +F    +     +   L ++ 
Sbjct: 122 KFIGAQSIKLELNKAIPKQKKKWFERELVKGDKIRLKNILFVGGEARFRAVSYKDLNQLL 181

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            V+       I + GH ++ P +     N  LS  RA +  + L+K G+ E R+S I GF
Sbjct: 182 AVMNAYPNLKILVEGHVNS-PGKRNTNTNQVLSTQRAEAVVKYLIKKGIRESRLSFI-GF 239

Query: 316 AHHRLKIASDPMN---SANRRIDILVE 339
            + ++   +  +      NRR++ILV+
Sbjct: 240 GNTKMIYPNTKLEYEMQFNRRVEILVQ 266


>gi|37704622|gb|AAR01583.1| OprF [Pseudomonas sp. MFY69]
          Length = 318

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  + + GHT
Sbjct: 212 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 271

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R   
Sbjct: 272 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVA 318


>gi|262368608|ref|ZP_06061937.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
           SH046]
 gi|262316286|gb|EEY97324.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
           SH046]
          Length = 189

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    +    LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 81  FDYDSSDLSNDDYQTLQAHAQFLMANANSRVALTGHTDER---GTREYNMALGERRAKAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
              L+ +GVS +++  +S +       A    N+   NRR++I
Sbjct: 138 ESFLITTGVSPNQLEAVS-YGKEMPINAGHDENAWKENRRVEI 179


>gi|146329268|ref|YP_001210055.1| OmpA domain-containing protein [Dichelobacter nodosus VCS1703A]
 gi|146232738|gb|ABQ13716.1| OmpA domain protein [Dichelobacter nodosus VCS1703A]
          Length = 194

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           +     F   S+     +I V+ +    L    +   +  GHTD          N  L  
Sbjct: 88  KDRVIYFSYDSAQLDSRSIAVITEHARYLRDHPDTRVVLEGHTDER---GSREYNIGLGE 144

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RAYS  ++  + GV++ ++ ++  +   R  +  +++   + NRR+ I+
Sbjct: 145 RRAYSVKRIFEQQGVAQTQM-RVLSYGEERPALWCSNESCYARNRRVVII 193


>gi|114799688|ref|YP_760523.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114739862|gb|ABI77987.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 378

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 80/262 (30%), Gaps = 6/262 (2%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG--STNQKKQYQRL 127
            P  +     +     + N  + S+ +  D      +T  ++ L     + + K   + L
Sbjct: 105 RPVTRVRAGFATTAPAQANSIKASTTSPPDPEFLFRLTAGTLSLNGNIPTQSLKTDLEDL 164

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
             +     +     +  N        G +      ++                  +    
Sbjct: 165 AESRKSPDHLIDVINALNVTGGALPNGFEAVAQRGIDTLSECVSGTASFSDLTFNLRCQA 224

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              +++ +    ++ L   V   I    +         +S + +     F   S I    
Sbjct: 225 DDTKVESIRASANAGLPLGVFGTIEILPIQAVASCEEELSRLLEAARIEFAPGSVILNVA 284

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  VL       +     + + GHTD +        N +LSL RA +    +++ GV  D
Sbjct: 285 SGPVLDLAARAASDCPGTLRVEGHTDDTGNPG---YNDQLSLRRAEAVRAAMIERGVPPD 341

Query: 308 RISKISGFAHHRLKIASDPMNS 329
           R+    G+  +    +++  + 
Sbjct: 342 RLVAA-GYGQNNPVSSNETEDG 362


>gi|37680143|ref|NP_934752.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|320156108|ref|YP_004188487.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
 gi|326423995|ref|NP_761229.2| outer membrane protein [Vibrio vulnificus CMCP6]
 gi|37198889|dbj|BAC94723.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|319931420|gb|ADV86284.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
 gi|319999372|gb|AAO10756.2| Outer membrane protein [Vibrio vulnificus CMCP6]
          Length = 223

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 12/146 (8%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
            +    L   + ++ V+       +  + +      N   F  SS          L+ + 
Sbjct: 84  DQQEKALREALLNSGVQVERVGENQLLLRLE-----NGIGFSSSSYALDSSIHNTLKGVA 138

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L    +   +  G TD++        N  LS  RA S    L+   V+  R     G 
Sbjct: 139 QILVEYPDTSLVIDGFTDST---GNDASNQILSERRAESVRSFLISQNVAAGRAVA-RGN 194

Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339
                   +        NRR++I + 
Sbjct: 195 GERYPLCTNSTAEGRACNRRVEIQIL 220


>gi|307944419|ref|ZP_07659759.1| outer membrane porin F [Roseibium sp. TrichSKD4]
 gi|307772168|gb|EFO31389.1| outer membrane porin F [Roseibium sp. TrichSKD4]
          Length = 164

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
            + +F + S+     +  +L      L       + I+GH D          N  LS  R
Sbjct: 45  RSILFLEGSAALDENSQALLVNQATWLKTYPNWLVKIQGHADD---PGTEAANKTLSTQR 101

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           A      L+  GV   R+  + G+   R     DP      NRR+ + + +
Sbjct: 102 AEVVQAALIAQGVDAKRLW-VKGYGIERPVTDCDPEACQRLNRRVVLNLRE 151


>gi|56698451|ref|YP_168825.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680188|gb|AAV96854.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
          Length = 637

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +   F+  S+         + +I ++L     +   I+GHTD+         N +LS  
Sbjct: 494 NDKIAFEPGSATIAASASGTMDRIADLLQSCGPIRLEIQGHTDSQ---GREEMNQQLSQA 550

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA S    L    V     + + G+   +    +   +    NRRI+  +   +
Sbjct: 551 RAQSVLNELRARRVLTASYAAV-GYGESQPIADNGTEDGREANRRIEFRLIRPE 603


>gi|225849650|ref|YP_002729884.1| OmpA family protein [Persephonella marina EX-H1]
 gi|225646341|gb|ACO04527.1| OmpA family protein [Persephonella marina EX-H1]
          Length = 235

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 195 LAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           L K I+  +   +   +       E     I++ + +     +F   S+    ++   L+
Sbjct: 72  LQKDIALEIKNRIKRILPMHAYQIEAIENYIVVRLFND---VIFKPDSAELTEKSKKALR 128

Query: 254 KIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            +   L     +   + I GH           D W+LS+ RA    Q L++ GV+ ++I 
Sbjct: 129 GVANALKALDKAYSEVLINGHA---YVVTKGIDPWKLSIKRAVVVAQYLIEHGVNPEKI- 184

Query: 311 KISGFAHHRLKIA-SDP-MNSANRRIDILVE 339
            ++G+ + +     + P +   N R++I ++
Sbjct: 185 AVTGYGNTKPVYTWNHPLLKRRNDRVEIFIK 215



 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
          +   ++ P+   +W I ++D M++L+ FF++++ ++  D         YF 
Sbjct: 3  RKKKEECPSV-PAWIISFSDLMSLLLTFFILLYSMSVLDIKKLMKFLWYFQ 52


>gi|167913946|ref|ZP_02501037.1| hypothetical protein Bpse112_25907 [Burkholderia pseudomallei 112]
          Length = 483

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 270 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 327

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 328 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 387

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 388 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 419


>gi|310816576|ref|YP_003964540.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
 gi|308755311|gb|ADO43240.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
          Length = 185

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E   +L    + L  +++   +  GH D          N  L   R
Sbjct: 75  DRILFAVDQSSVSSEASQILNGQAQWLQTNSQYGIVIEGHADEQ---GTREYNVALGARR 131

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  G+S +RI  +S +   R     +++   + NRR
Sbjct: 132 ANAVREYLISRGISANRIRTVS-YGKERPIAVCSAESCYTQNRR 174


>gi|228018089|gb|ACP52723.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018119|gb|ACP52738.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018121|gb|ACP52739.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018123|gb|ACP52740.1| fibronectin-binding protein [Campylobacter coli]
 gi|228018137|gb|ACP52747.1| fibronectin-binding protein [Campylobacter coli]
          Length = 224

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P     +++I ++L  +    +I  GHTD          N +LS  RA S 
Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 193 AKKLEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224


>gi|124004158|ref|ZP_01689004.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
 gi|123990228|gb|EAY29727.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
          Length = 660

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 74/276 (26%), Gaps = 10/276 (3%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
            FG    T S G F       +   +          TK            +    + +  
Sbjct: 385 DFGIIYNTDSTGYFSSDREGGKGGDDIYHFLDQTPKTKTFNYFLAIDVAVEDTVTQEDIP 444

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +             +              +    K    +        +   +  ++   
Sbjct: 445 LPGSKVEVYEGTIASIKKGSKPIHIFTADAKGHVKEFPVKVKTDYVIKAGNNVSKVQYIT 504

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETI 249
             ++ +                   +   T   +   +  +    +F D +     P+  
Sbjct: 505 NEEEYSMLGREADQDDPKYKKAVNDIHLQTTVYLKPVLGYEFEAIIFYDFARWEIRPDAA 564

Query: 250 VVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             L +       +   + +    HTDA       ++N  LS  RA SA   L+  G+  D
Sbjct: 565 KELDERVLTFLKNNPKLIVELGSHTDAR---GTDQNNLILSQKRAKSAVDYLISKGIDPD 621

Query: 308 RISKISGFAHHRLK---IASDPMNSANRRIDILVED 340
           RI    G+    LK     ++  + ANRR  + V  
Sbjct: 622 RIKA-KGYGETDLKIKEAKTEEEHQANRRTTVKVLG 656


>gi|297184220|gb|ADI20338.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [uncultured alpha proteobacterium
           EB080_L27A02]
          Length = 618

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+ I       F+    I   + + V++ I +VL    E    I+GHTD+         N
Sbjct: 492 INTIISNTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDS---SGSEELN 548

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             LS  RA +    L+   V    IS   G+        +        NRRI+I + 
Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLL 604


>gi|194337186|ref|YP_002018980.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309663|gb|ACF44363.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 157

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               +D   S    + +  L+     +  +TE    I GH D       A  N  L   R
Sbjct: 52  GDVFYDFDRSELRADAVEQLKTNFNWIQANTEKSVIIEGHCDER---GTAEYNLALGQRR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA   ++  GV+  R+  +S F   +     +++   + NRR
Sbjct: 109 ANSAKDYIVNLGVAPVRLKTVS-FGEEKPFADGSNEEAWAQNRR 151


>gi|114771339|ref|ZP_01448759.1| OmpA domain protein [alpha proteobacterium HTCC2255]
 gi|114548264|gb|EAU51151.1| OmpA domain protein [alpha proteobacterium HTCC2255]
          Length = 618

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+ I       F+    I   + + V++ I +VL    E    I+GHTD+         N
Sbjct: 492 INTIISNTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDS---SGSEELN 548

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             LS  RA +    L+   V    IS   G+        +        NRRI+I + 
Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLL 604


>gi|302381978|ref|YP_003817801.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302192606|gb|ADL00178.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 184

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S    PE    L      L    +  + I G+ D          N  L   R
Sbjct: 75  DRIYFDLDSYQVSPEAYPRLDAQAAWLQRYPQVQVRIEGNADER---GTREYNLALGARR 131

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
           A S    L+  GV   RI  IS F   R     A++   + NR
Sbjct: 132 AESIRNYLIDRGVPAGRIDTIS-FGKERPIAQGANEDAWARNR 173


>gi|124002443|ref|ZP_01687296.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123992272|gb|EAY31640.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 756

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           ++   F+ +      + I  L+   + L  +    ++I GHTD       A     LS  
Sbjct: 648 QSVAFFEYNKYELKDKFIKNLEPFIKYLQKNKNAELAIYGHTDQV---GTAAACLLLSQR 704

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340
           RA +  Q  ++ GV+  RI+   G+   +    +   D     NRRI++L+ +
Sbjct: 705 RANAIKQYFVRHGVAAKRITA-KGYGKAKPIWKNEKHDWQAKENRRIELLLLE 756


>gi|148549735|ref|YP_001269837.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148513793|gb|ABQ80653.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 162

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GH D+      A  N +L
Sbjct: 51  YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 107

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V
Sbjct: 108 SERRAQSVTKALVGIGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 159


>gi|255263704|ref|ZP_05343046.1| OmpA domain protein [Thalassiobium sp. R2A62]
 gi|255106039|gb|EET48713.1| OmpA domain protein [Thalassiobium sp. R2A62]
          Length = 632

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 24/262 (9%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
                 D+        ++      + + +  ++ +   + +      + S      +   
Sbjct: 342 PEAPDADDQGPPEFTAIRSPEGLVQLRGRVKDDLMNTAAENYAKARLRISDVTMGTRLDG 401

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +    + +   E           +       R     +  ++ +S L+++ + +   
Sbjct: 402 DLPANWSVRVLAGIEALAELSNGAVVVQPDVVTVRGNTGNQGATAKISQLLSEKLGEAED 461

Query: 217 FETTRTGI-----------------LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           F      +                  I          F+  S+         + +I E+L
Sbjct: 462 FRIDVKYVEQLDPIAALPSPEECIEQIQAATSNAKITFEPGSANIDAGARSTVDQIAEIL 521

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              T   I I G+TD+         N +LS  RA +    L    V     + I G+   
Sbjct: 522 QRCTSTKIEIAGYTDSQ---GREVMNQQLSQQRAEAVLTALRARRVPTSAFTAI-GYGEE 577

Query: 319 RLKIASDPMNSA--NRRIDILV 338
                ++  +    NRRI+  +
Sbjct: 578 SPIADNETEDGREANRRIEFKL 599


>gi|332140722|ref|YP_004426460.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550744|gb|AEA97462.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 290

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
            +  +S+     +   L  IGE L   +E+  +   G+TD+        +N +LS+ RA 
Sbjct: 185 SYQNNSTELTKYSQKRLTMIGEYLKEDSELELVLLDGYTDSY---GGRWNNEQLSIRRAN 241

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                L   GV EDRI +++G    R    +D     + NRR+ + +
Sbjct: 242 EVKSYLTTLGVPEDRI-QLTGHGEKRHIAPNDTRESRAQNRRVVVRL 287


>gi|282859313|ref|ZP_06268425.1| OmpA family protein [Prevotella bivia JCVIHMP010]
 gi|282587893|gb|EFB93086.1| OmpA family protein [Prevotella bivia JCVIHMP010]
          Length = 226

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 8/148 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K++  ++  V +  V+ V        + ++     +  +F  +S      +   L + 
Sbjct: 74  MDKVAREVASRVPNASVEKVTDANGLQCVKVTF---DSGILFPLNSYTLSSASKKDLYEF 130

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +V+  + +    I+G+TDA         N  LS +RA +    L  +GVS  +I  + G
Sbjct: 131 AKVMKANADCDVAIQGYTDA---SGSDNINLPLSQNRANAVSSCLRSNGVSGRQIRSVEG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
                    +  ++  NRR+++ +   +
Sbjct: 188 LGSANPI-ENARVSQKNRRVEVYMYASE 214


>gi|262173862|ref|ZP_06041539.1| protein F-related protein [Vibrio mimicus MB-451]
 gi|261891220|gb|EEY37207.1| protein F-related protein [Vibrio mimicus MB-451]
          Length = 207

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 12/160 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++ +   +  L+ +       L   +  N +   +       I +     +NT  FD 
Sbjct: 50  APQLNSAGVQGPLRQVRTSSYEALRQFLLSNGIDHEIMPGDYPMIKL-----KNTIKFDT 104

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            S+    ++   L ++ + LA  + +  +  GHTD +      + N  LS  RA S    
Sbjct: 105 GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GAQKFNDTLSEKRASSVKTA 161

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           L++  V+++ I    G+  H     +      + NRR+++
Sbjct: 162 LVQRQVAQNAIYT-RGYGEHVPACTNKTKNGRACNRRVEV 200


>gi|167897282|ref|ZP_02484684.1| hypothetical protein Bpse7_26327 [Burkholderia pseudomallei 7894]
          Length = 481

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 268 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 325

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 326 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 385

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 386 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 417


>gi|227536324|ref|ZP_03966373.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243821|gb|EEI93836.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 650

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D        +   +L ++   +  +    I +  HTD+      A+ N +LS +R
Sbjct: 538 ENIYYDLDKYNIREDAKPILNQLVRTMRDNPTLKIELSSHTDSR---ATAKYNMKLSQNR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A +A   ++  G++ DRI    G+   +L          SD  + ANRR +I V +
Sbjct: 595 AQAAVDYIVSRGIARDRIVA-KGYGESKLVNKCADGVKCSDAEHQANRRTEIKVLE 649


>gi|298530631|ref|ZP_07018033.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510005|gb|EFI33909.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 274

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 17/155 (10%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L  L+ D+  K + F   R    + I       +++   +    E I VL K+  VL 
Sbjct: 93  KQLMPLLWDDKRKDLNFLEKRF---VQIFSINTELLYEPGETELSSEGIEVLDKVVPVLK 149

Query: 261 HSTEVISIRGHTDASPFRNIA-----------RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
                + + GHT        A              WRLSLDRA + Y+ +M+ GV  + +
Sbjct: 150 DLEYPVLLAGHTSLVRDEFGAGWQALKDDVIINPTWRLSLDRALNVYRYIMEQGVDPE-M 208

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            ++  F   + +  +        NRR++I+++ R 
Sbjct: 209 VRLEAFGEFQPRYGTRTEANRRQNRRVEIVLDRRN 243


>gi|254441098|ref|ZP_05054591.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198251176|gb|EDY75491.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 226

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         L++    +    E    + GHTD       +  N RL L RA + 
Sbjct: 83  FPFNSTALDASARATLRQQANWIRQFPEVRFKVFGHTD---LVGSSAYNRRLGLRRAEAV 139

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  F   +  I ++     NRR
Sbjct: 140 VLYLSSQGISRSRLEAVVTFGETQPLIVTEGRERRNRR 177


>gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
           PV-1]
 gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
           PV-1]
          Length = 360

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 17/130 (13%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           +   D     +F  + S    E    L K  E L   S E + + G+TD          N
Sbjct: 232 VFASDSSANSLFGFNRSTLRNEGKRALDKFVESLKGASFETMVVTGYTDRI---GTDEYN 288

Query: 285 WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--N---------R 332
            +LS  RA +    L+K  G+  D+I+   G          +       N         R
Sbjct: 289 QKLSERRANAVRDYLVKFGGIPADKITA-RGAGESNPVTKREDCAGKSGNPLITCLAPDR 347

Query: 333 RIDILVEDRQ 342
           R+++ V   +
Sbjct: 348 RVEVEVTATR 357


>gi|154247009|ref|YP_001417967.1| peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
           Py2]
 gi|154161094|gb|ABS68310.1| Peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
           Py2]
          Length = 164

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+    L +  + L        +I GH D          N  L   R
Sbjct: 55  DRVFFESDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADER---GTREYNIALGAKR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 112 AQSVRDYLAARGIDPARMRTIS-YGKERPVAVCNDISCWSQNRR 154


>gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
           centenum SW]
 gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
           centenum SW]
          Length = 355

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  T  FD   +   P+   VLQ +           + + GH D       A  N RLS+
Sbjct: 248 RNFTVFFDWDKATLTPDAEKVLQSVAADARTGGIAALQVTGHADT---SGPADYNQRLSM 304

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            RA +    L+  G+    I  I G       + +       +NRR  I+
Sbjct: 305 RRAEAVRDYLIAQGIPAGEI-AIEGRGETDPLVPTADGVREPSNRRGVII 353


>gi|254689864|ref|ZP_05153118.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 6 str.
           870]
 gi|256258118|ref|ZP_05463654.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
           C68]
 gi|260755394|ref|ZP_05867742.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
 gi|260884410|ref|ZP_05896024.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
           C68]
 gi|297248966|ref|ZP_06932674.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
           B3196]
 gi|260675502|gb|EEX62323.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
 gi|260873938|gb|EEX81007.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
           C68]
 gi|297174099|gb|EFH33456.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
           B3196]
          Length = 168

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167


>gi|254447387|ref|ZP_05060853.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
 gi|198262730|gb|EDY87009.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
          Length = 204

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 13/155 (8%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETI 249
            +  +++  L                      I+  D R       +F  +S+       
Sbjct: 38  AIQFELTQDLEAEKQRRQALERALADPLASGRITFQDGRIGISGNLLFRINSADLQSGGN 97

Query: 250 VVLQKIGEVLA----HSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSG 303
            VLQ + E L        E++ + G TD       N+ RDNW LS  RA +  + L++ G
Sbjct: 98  QVLQDLAEPLKVYLSQHDELLMVSGFTDDLSLHEDNLYRDNWGLSAQRALTVTRTLVEQG 157

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           + +DR+   + F  +   + +      + NRR++I
Sbjct: 158 LPQDRLFAAA-FGANAPTVPNRDAASRAKNRRVEI 191


>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
 gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
           [Enterobacter sp. 638]
          Length = 351

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 223 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  ++I    G             +    +A       +RR++I 
Sbjct: 280 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGATCDNVKPRAALIDCLAPDRRVEIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|153835168|ref|ZP_01987835.1| outer membrane protein [Vibrio harveyi HY01]
 gi|148868362|gb|EDL67484.1| outer membrane protein [Vibrio harveyi HY01]
          Length = 330

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E+   L +I ++L    +  + I G TD       ++ N +L+  RA S 
Sbjct: 222 FGFDSTKVSQESEQKLLEIQKLLVSYPQSQVEIVGFTDDR---GASQYNEKLAKRRAQSI 278

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L   GV  D+I  ++         ++   +    NRR+++ +
Sbjct: 279 AKYLESKGVKADQI-SLTSKGELDPVASNHSEDGRVKNRRVEVSI 322


>gi|260773875|ref|ZP_05882790.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
 gi|260610836|gb|EEX36040.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
          Length = 208

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 13/201 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           SL  D     +L  +     +  +  ++ L P S             Q +     S+L  
Sbjct: 17  SLATDKMFKSNLLDTAPKNDAEVRYPDWRLAPASLMAAKTESMPATHQPMKTLSDSSLES 76

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
            ++ N +   L     T + +     +    F   S++    ++  L ++G  LA++ ++
Sbjct: 77  FLSANGLDYELIPGDHTMVKL-----KRAVQFQTGSAVVPSASVQWLAQLGRYLANTPQI 131

Query: 266 ISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
             +  GHTD +      R N  LS+ RA +   +L++  VS   I    G+  H     +
Sbjct: 132 DIVIEGHTDNT---GTERFNDGLSMRRADTVKNILLEQQVSLAAIYT-RGYGEHTPACTN 187

Query: 325 DP--MNSANRRIDIL-VEDRQ 342
                 + NRR+++L + D Q
Sbjct: 188 QTSQGRACNRRVELLMIMDSQ 208


>gi|124383073|ref|YP_001024835.1| hypothetical protein BMA10229_1027 [Burkholderia mallei NCTC 10229]
 gi|124291093|gb|ABN00363.1| OmpA domain protein [Burkholderia mallei NCTC 10229]
          Length = 560

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 347 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 404

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 405 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 464

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 465 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 496


>gi|116326910|ref|YP_796630.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332434|ref|YP_802152.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116119654|gb|ABJ77697.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116126123|gb|ABJ77394.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 545

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S   L ++  +L+ +   L  +  +   I GHTD        +DN  LS +RA + 
Sbjct: 442 FALGSYEILEDSFPILENLNSYLRENPGIKIRIIGHTD---LNGDYQDNIILSHNRANAV 498

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILV 338
              L++ G+   RI    G       I   DP  +  NRR +  +
Sbjct: 499 KDYLVRKGIDSGRIVT-DGKGSSEPIIPRKDPKTDYKNRRTEFQI 542


>gi|86139070|ref|ZP_01057641.1| OmpA domain protein [Roseobacter sp. MED193]
 gi|85824301|gb|EAQ44505.1| OmpA domain protein [Roseobacter sp. MED193]
          Length = 640

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 F+  S+     + VVL  I  +L     +   I+GHTD+         N  LS 
Sbjct: 494 SSGKISFEPGSATVAGGSSVVLDHIASILEKCGPIRLEIQGHTDSQ---GREGMNQALSQ 550

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA S    L    +       I G+   +   ++D       NRRI+  +
Sbjct: 551 SRAQSILNELRARRIRTSAFIAI-GYGESQPIASNDSEEGREANRRIEFRL 600


>gi|325288156|ref|YP_004263946.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324323610|gb|ADY31075.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 638

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 11/119 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
                 FD       P   + LQK+  VL       I I  HTD+         N  LS 
Sbjct: 523 NVEPIYFDYDKYDITPRAEIELQKVLFVLKEFPKTKIKIESHTDSR---GKDAYNLELSD 579

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
           +RA S  + L+  GV  DRI   +GF   +LK         S+  +  NRR D ++  +
Sbjct: 580 NRAKSTRRYLVSKGVDIDRIESANGFGELKLKNKCSNGVKCSEQEHLVNRRSDFIIVAK 638


>gi|206562090|ref|YP_002232853.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
 gi|198038130|emb|CAR54078.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
          Length = 239

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P+    L +  ++ +        I G TD++        N  LS  RA + 
Sbjct: 136 FAFDSAALTPDARAQLDRFVDINSGIEFRRVAITGFTDST---GSNTHNLALSASRARNV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
              L  +G+         G        ++      + NRR++I ++ +
Sbjct: 193 MNYLRSNGLKAQSFVS-EGLGAADPVASNATAEGRAQNRRVEIRIDAK 239


>gi|167722659|ref|ZP_02405895.1| hypothetical protein BpseD_26829 [Burkholderia pseudomallei DM98]
          Length = 480

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 267 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 324

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 325 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 384

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 385 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 416


>gi|167848689|ref|ZP_02474197.1| hypothetical protein BpseB_25726 [Burkholderia pseudomallei B7210]
          Length = 486

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 273 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 330

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 331 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 390

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 391 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 422


>gi|330968986|gb|EGH69052.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 96

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--D 325
           + G+TD++     A  N  LS  RA S    L++ GV   R+  + G+        +  +
Sbjct: 14  VEGYTDST---GSASYNQSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSN 69

Query: 326 PMNSANRRIDILVEDRQ 342
              + NRR+++ + +  
Sbjct: 70  SGRAMNRRVEVTISNDN 86


>gi|319956698|ref|YP_004167961.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
 gi|319419102|gb|ADV46212.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
          Length = 173

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLD 290
               F        P+ +  +      +    S+  I I G+ D          N  L L 
Sbjct: 66  KMVYFSTDRYDVEPDQLQRIMSDMPKIQKLASSGKIRIEGNCDEM---GTDEYNHALGLK 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           RA +   +L+ +G+   RI  +S +              ++ NRR++I
Sbjct: 123 RAKAVQSILVSNGIPSSRIDVVS-YGESNPICTGHSAPCHAKNRRVEI 169


>gi|37704618|gb|AAR01581.1| OprF [Pseudomonas sp. MFY65]
          Length = 317

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 211 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 270

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +   VL +  GV   R+  + G+   R   
Sbjct: 271 DSV---GPDAYNQKLSERRANAVKDVLTQQYGVESTRVDSV-GYGETRPVA 317


>gi|325275196|ref|ZP_08141163.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324099683|gb|EGB97562.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 309

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I E +     V  +   GH+D          N  LS  RA +
Sbjct: 179 FPGGGIELDDAAKARLDVILEYMKADPSVNHVELNGHSDN---SGNRLTNRDLSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
                   G+ +++I  +           ++     + NRR++I ++ 
Sbjct: 236 VADYFKAHGIKDEQI-TVRFHGERYPVAKNNTAANRARNRRVNIELDR 282


>gi|167741629|ref|ZP_02414403.1| hypothetical protein Bpse14_26418 [Burkholderia pseudomallei 14]
          Length = 472

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 259 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 316

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 317 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 376

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 377 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 408


>gi|148546371|ref|YP_001266473.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148510429|gb|ABQ77289.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 313

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I + +     V  +   GH+D          N  LS  RA +
Sbjct: 179 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLTNRDLSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
                  +GV E++I  +           ++     + NRR++I ++ 
Sbjct: 236 VADYFKANGVPEEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 282


>gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
 gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
          Length = 564

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 6/108 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +     F   S          + ++ + L  ++  I I G TD          N  L   
Sbjct: 457 KFRPVYFGFDSYAIGGGERSKIDEVAQFLKSASNTIIIAGFTDER---GTPEYNRGLGER 513

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           RA +  + L++ G    +I  +S F         +++   + NRR + 
Sbjct: 514 RAQAVREALIRDGADGSKIQTVS-FGAEMPADQGSNESAWAKNRRAEF 560


>gi|167827195|ref|ZP_02458666.1| hypothetical protein Bpseu9_26190 [Burkholderia pseudomallei 9]
          Length = 489

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 276 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 333

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 334 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 393

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 394 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 425


>gi|126725971|ref|ZP_01741813.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
 gi|126705175|gb|EBA04266.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
          Length = 224

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+         LQ+    +    E    + GHTD        R N RL L RA S 
Sbjct: 77  FAFNSAKLDGAAQATLQQQATWIRQFPEVRFRVYGHTD---LVGGNRFNKRLGLRRAQSV 133

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
               +  G+  DR+  ++ F   +  + +      NRR
Sbjct: 134 VNFFISQGIGRDRLEAVASFGEEQPIVFTQTEERQNRR 171


>gi|194337429|ref|YP_002019223.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309906|gb|ACF44606.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 337

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +     PE+   L++I  +L       + + GHTD          N  LS  RA + 
Sbjct: 235 FDPNKWDIKPESRPALKEIAILLNKQPTLRLHVVGHTDNV---GGYEANTVLSKRRAEAV 291

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              L+K  G+S  R++  +G A+     ++      + NRR++++
Sbjct: 292 AASLVKDFGISALRLTA-NGAAYLAPVASNSTEAGRAKNRRVELV 335


>gi|67639335|ref|ZP_00438203.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
 gi|121597986|ref|YP_990337.1| hypothetical protein BMASAVP1_0732 [Burkholderia mallei SAVP1]
 gi|126447196|ref|YP_001079177.1| hypothetical protein BMA10247_A2001 [Burkholderia mallei NCTC
           10247]
 gi|167003578|ref|ZP_02269364.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254177240|ref|ZP_04883896.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
 gi|254203187|ref|ZP_04909549.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254208522|ref|ZP_04914871.1| OmpA family protein [Burkholderia mallei JHU]
 gi|121225784|gb|ABM49315.1| OmpA domain protein [Burkholderia mallei SAVP1]
 gi|126240050|gb|ABO03162.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
 gi|147746232|gb|EDK53310.1| OmpA family protein [Burkholderia mallei FMH]
 gi|147751209|gb|EDK58277.1| OmpA family protein [Burkholderia mallei JHU]
 gi|160698280|gb|EDP88250.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
 gi|238519871|gb|EEP83337.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
 gi|243060913|gb|EES43099.1| OmpA family protein [Burkholderia mallei PRL-20]
          Length = 552

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 396

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 456

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488


>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
          Length = 358

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++I    G         +      P  +       +RR++I 
Sbjct: 287 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|239816213|ref|YP_002945123.1| hypothetical protein Vapar_3239 [Variovorax paradoxus S110]
 gi|239802790|gb|ACS19857.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 218

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 27/186 (14%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +      L  E        +R + L + ++  L+          +             
Sbjct: 39  GMQLDLAAKLQAEVQQRQAETQRREALEQALAGPLAAGRVTLNNGRIGI----------- 87

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---- 280
                + +F  +S+   PE   VL+     +   L    EV+ + G TD    R      
Sbjct: 88  ---SGSVLFAFNSAELQPEGRQVLKSLAAPVASYLRARDEVLMVSGFTDDRQMRQSKDGN 144

Query: 281 --ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
               DNW LS  RA +  + L++ GV    +   + F   +   ++      + NRR+++
Sbjct: 145 RPFADNWELSAQRALTVTRALIEEGVPSSSVFAAA-FGSEQAVASNADAEGRAKNRRVEM 203

Query: 337 LVEDRQ 342
               RQ
Sbjct: 204 APTPRQ 209


>gi|167818821|ref|ZP_02450501.1| hypothetical protein Bpse9_27048 [Burkholderia pseudomallei 91]
          Length = 490

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 277 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 334

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 335 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 394

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 395 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 426


>gi|170719951|ref|YP_001747639.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169757954|gb|ACA71270.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 163

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GH DA      A  N +L
Sbjct: 52  FDLSGKVLFGSDVDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADA---SGKAAYNQQL 108

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           S  RA+S  +VL+  G+    I    G    +    +      + NRR+ I+V
Sbjct: 109 SERRAHSVAKVLIGIGMPTQNIQT-RGLGSTQPVADNRTSLGRTENRRVSIVV 160


>gi|53721567|ref|YP_110552.1| hypothetical protein BPSS0531 [Burkholderia pseudomallei K96243]
 gi|126442377|ref|YP_001061803.1| hypothetical protein BURPS668_A0804 [Burkholderia pseudomallei 668]
 gi|126457957|ref|YP_001074752.1| hypothetical protein BURPS1106A_A0716 [Burkholderia pseudomallei
           1106a]
 gi|134283082|ref|ZP_01769784.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|167905639|ref|ZP_02492844.1| hypothetical protein BpseN_25596 [Burkholderia pseudomallei NCTC
           13177]
 gi|167921862|ref|ZP_02508953.1| hypothetical protein BpseBC_25138 [Burkholderia pseudomallei
           BCC215]
 gi|217424539|ref|ZP_03456037.1| type IV/VI secretion system protein, DotU/OmpA family protein
           [Burkholderia pseudomallei 576]
 gi|226196513|ref|ZP_03792094.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|242312248|ref|ZP_04811265.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|254185465|ref|ZP_04892053.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|254296659|ref|ZP_04964113.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|52211981|emb|CAH37988.1| OmpA-family membrane protein [Burkholderia pseudomallei K96243]
 gi|126221868|gb|ABN85373.1| type IV/VI secretion system protein, DotU/OmpA family protein
           [Burkholderia pseudomallei 668]
 gi|126231725|gb|ABN95138.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|134245730|gb|EBA45822.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|157806733|gb|EDO83903.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|184209700|gb|EDU06743.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|217392463|gb|EEC32487.1| type IV/VI secretion system protein, DotU/OmpA family protein
           [Burkholderia pseudomallei 576]
 gi|225931389|gb|EEH27395.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|242135487|gb|EES21890.1| OmpA family protein [Burkholderia pseudomallei 1106b]
          Length = 552

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 396

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 456

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488


>gi|198275312|ref|ZP_03207843.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
 gi|198271895|gb|EDY96165.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
          Length = 238

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 8/154 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           KK+    +        +            + +           S+++       + +   
Sbjct: 73  KKMDKAAAQAEQIEGAQVEQVTDNNGLQAVKVTFDSGILFNTSSATLSSSAKSALSKFAN 132

Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            VL  + ++   I G+TD + ++N   +     N  LS +RA S    L+  G S  +I 
Sbjct: 133 NVLNQNKDMDVAIYGYTDNTGWKNSTAEQSRQKNLDLSQERAQSVSSYLLACGASSSQIK 192

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            ++G         +        NRR+++ +   Q
Sbjct: 193 SVTGMGEENPVADNSTAAGRQENRRVEVYMYASQ 226


>gi|254187351|ref|ZP_04893865.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|157935033|gb|EDO90703.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 571

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507


>gi|76819156|ref|YP_337240.1| hypothetical protein BURPS1710b_A2089 [Burkholderia pseudomallei
           1710b]
 gi|237509287|ref|ZP_04522002.1| type IV / VI secretion system protein, DotU family [Burkholderia
           pseudomallei MSHR346]
 gi|254198855|ref|ZP_04905273.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|254264296|ref|ZP_04955161.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|76583629|gb|ABA53103.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
 gi|169657027|gb|EDS88421.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|235001492|gb|EEP50916.1| type IV / VI secretion system protein, DotU family [Burkholderia
           pseudomallei MSHR346]
 gi|254215298|gb|EET04683.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 571

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507


>gi|53716506|ref|YP_105228.1| hypothetical protein BMAA0453 [Burkholderia mallei ATCC 23344]
 gi|52422476|gb|AAU46046.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
          Length = 571

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507


>gi|84687704|ref|ZP_01015577.1| OmpA/MotB family protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664287|gb|EAQ10778.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2654]
          Length = 165

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   P+   +L +  + L  +T     I GH D          N  L   R
Sbjct: 55  DRVLFMVDQSTLSPQAQGILDQQAQWLNSNTAYSAIIEGHADEQ---GTREYNVALGARR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A S    L++ GV+  R+  +S +   R     + +     NRR   ++    G
Sbjct: 112 ASSVQSYLIERGVAPGRLKTVS-YGKERPLAICSDESCYQQNRRAVTVLTTGAG 164


>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
 gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
          Length = 355

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 227 KSDVLFTFNKASLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+   +IS   G         +  D + +          +RR++I 
Sbjct: 284 EKRAQSVVDYLVSKGIPSSKISA-RGEGKSNPVTGNTCDSVKARKALIDCLGPDRRVEIE 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|294850947|ref|ZP_06791623.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
 gi|294821590|gb|EFG38586.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
          Length = 168

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 ATATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167


>gi|163738854|ref|ZP_02146267.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|163741898|ref|ZP_02149288.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161385071|gb|EDQ09450.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161387659|gb|EDQ12015.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 636

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 78/267 (29%), Gaps = 10/267 (3%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                 D   PPE ++    +  +      +   L+  S++  +     +N        +
Sbjct: 342 PEPETEDGNGPPEFTATLSPEGQVQLRGRISDEALRQISSSYAQARFGSQNVYSATRVVE 401

Query: 139 Q-SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                    +    E    L +        +   +           +A     +L D   
Sbjct: 402 DLPADWPVRVLAGLEALSHLQRGAVSVTPDSLSLSGMSHREDAPSEIAKLLSAKLGDAES 461

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
              +       +   K +  E     +    +   +   F+  S+     +   L +I +
Sbjct: 462 YELNVTYEAPPEPADKPMSPELCEAELA--AVQTVSKITFEPGSATVAAGSRDTLDQIAD 519

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +LA    V   I+GHTD+         N  LS  RA S    L    +     +   G+ 
Sbjct: 520 ILARCDGVRLEIQGHTDSQ---GREEMNQTLSQSRAQSVLNELRGRRLVTSSFTA-KGYG 575

Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341
                 ++D  +    NRRI+  +   
Sbjct: 576 ESTPIASNDTEDGREANRRIEFRLIRP 602


>gi|90426219|ref|YP_534589.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90108233|gb|ABD90270.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 166

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L K  + L        +I GH D          N  L   R
Sbjct: 58  DRVFFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADER---GTREYNIALGARR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 115 AQSVRTYLTSRGIDSSRMRTIS-YGKERPVAVCNDISCWSQNRR 157


>gi|37704610|gb|AAR01577.1| OprF [Pseudomonas sp. MFY57]
          Length = 316

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +    +  ++  GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL +  GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVA 316


>gi|284032832|ref|YP_003382763.1| OmpA/MotB domain-containing protein [Kribbella flavida DSM 17836]
 gi|283812125|gb|ADB33964.1| OmpA/MotB domain protein [Kribbella flavida DSM 17836]
          Length = 327

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 7/130 (5%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
              +          ++ +  ++  +F   ++I   ++   + ++  +L       + + G
Sbjct: 201 KPPLSEACQTFESRLAQLTSQHKIIFLSGTAIVNEKSRGSVVRVAALLRTCGTARVELAG 260

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           HTD          +  LS  RA +    L++ GV   RI    G+       ++      
Sbjct: 261 HTDNL---GDPSTSLPLSQRRADAVKATLVRLGVPAGRIIS-RGYGEFEPVASNRTSAGR 316

Query: 331 --NRRIDILV 338
             NRR++I V
Sbjct: 317 IANRRVEIRV 326


>gi|229528510|ref|ZP_04417901.1| protein F-related protein [Vibrio cholerae 12129(1)]
 gi|229334872|gb|EEO00358.1| protein F-related protein [Vibrio cholerae 12129(1)]
          Length = 204

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V 
Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVV 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|26987823|ref|NP_743248.1| OmpA family outer membrane protein [Pseudomonas putida KT2440]
 gi|24982522|gb|AAN66712.1|AE016299_8 outer membrane protein, OmpA family [Pseudomonas putida KT2440]
          Length = 317

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I + +     V  +   GH+D          N  LS  RA +
Sbjct: 183 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLTNRDLSRRRALA 239

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
                  +GV E++I  +           ++     + NRR++I ++ 
Sbjct: 240 VADYFKANGVPEEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 286


>gi|254440083|ref|ZP_05053577.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198255529|gb|EDY79843.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 720

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 9/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRL 287
           +R    F  SS      +I  +  +  V+         + I GHTD+         N  L
Sbjct: 603 ERGQIEFLSSSVRLDATSIRTINALAAVILPCVAADLTLDIGGHTDS---SGDEPTNKAL 659

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           S DRA +    L+  GV +  ++   GF   +    ++     +ANRR DI 
Sbjct: 660 SQDRANAVRAALIARGVPDVAMTAF-GFGQTQPIADNETPEGRAANRRTDIT 710


>gi|109898397|ref|YP_661652.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109700678|gb|ABG40598.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 366

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           MFD +SS         +Q+  + +       ++  G+  A         N +LS++RA +
Sbjct: 254 MFDNNSSKLKNIDSASVQEFVDFMRRYGTTNAVIEGYASA---PGTDAYNMKLSVERAQN 310

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
             Q L+    ++  R+  + G+   +L  +++   +   NRRI+  V  
Sbjct: 311 VRQYLVAQYNIAGSRLEAV-GYGETKLLDSANTREAHQKNRRIEAYVTA 358


>gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
           17393]
 gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
           17393]
          Length = 666

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 34/167 (20%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L+ +++ +   +E       I+         ++   +   PE+ V L ++ ++L  + 
Sbjct: 500 EELMTEDVNEDRHYELEFPLSSITRPVLIENIFYEFDRADLTPESTVALDELIQLLNDNP 559

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I +  H D   ++     N RLS  RA S  + L+K G+  +R++   G+   + K 
Sbjct: 560 NVTIELSAHCD---YKGNDDYNLRLSQRRAESVVRYLIKGGIDSERLTP-KGYGEQQPKT 615

Query: 323 ASD---------------PMN--------------SANRRIDILVED 340
            ++                                + NRR +  V  
Sbjct: 616 VTNFTLKSAPFLKVGDVLTEEFIKNLPLEQQEICNAINRRTEFKVLR 662


>gi|225628264|ref|ZP_03786298.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
 gi|225616110|gb|EEH13158.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
          Length = 183

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 74  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 130

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 131 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 182


>gi|87118960|ref|ZP_01074858.1| OmpF [Marinomonas sp. MED121]
 gi|86165351|gb|EAQ66618.1| OmpF [Marinomonas sp. MED121]
          Length = 192

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +        +  L K+G+ L       + I GHTD+        DN RLS +RA + 
Sbjct: 64  FHTNKFELEDNELKGLLKLGKFLQKHQSSDVFIEGHTDSM---GDDEDNLRLSQNRANAI 120

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
            Q L+    +S DRI  I G   ++    ++     + NRR+
Sbjct: 121 KQALVTKFLISSDRIIAI-GHGENQPIANNETEYGRAVNRRV 161


>gi|86132613|ref|ZP_01051206.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85816855|gb|EAQ38040.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 650

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
             N   FD + S   P+  + L K+   +    E+ I++R HTD+         N  LS 
Sbjct: 536 NLNPIYFDYNKSDIRPDAALELTKVISAMKQVPEMVINVRSHTDSR---GKDSYNLSLSD 592

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            RA S    ++  G++ +RI   +G+   +L          ++  +  NRR + +V +
Sbjct: 593 RRAKSTVAYIISRGINAERI-SGNGYGETQLVNGCGNNSDCTEEQHQLNRRSEFIVVN 649


>gi|152990958|ref|YP_001356680.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
 gi|151422819|dbj|BAF70323.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
          Length = 182

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 9/116 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDN 284
           I  Q     FD       P+    ++   ++          I + G+ D          N
Sbjct: 69  IEAQSKKIYFDFDKYNIRPDQQPRVEFDAKLFNSDEAKPFNIKVEGNCDEW---GTDEYN 125

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           + L L RA S    L   GV++DR++ IS +               + NRR++  +
Sbjct: 126 YALGLKRAKSVRDALAARGVAKDRMTLIS-YGESNPVCTEHTKECWAKNRRVEFEL 180


>gi|305665788|ref|YP_003862075.1| OmpA family protein [Maribacter sp. HTCC2170]
 gi|88710554|gb|EAR02786.1| OmpA family protein [Maribacter sp. HTCC2170]
          Length = 827

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIV 250
                  +     DN V        R   +I++ D     +     FD   S    +   
Sbjct: 672 QDYFDEEVGVSTKDNEVVNTEVALRRLKEMIAVEDGIRKLKTEMIYFDFDKSYIRKDASE 731

Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            L K+ +V+     + I I  HTD+         N  LS  RA S    ++  G+  +RI
Sbjct: 732 ELDKLVQVMTEYPTMVIKIESHTDSR---GARVYNKYLSEKRAKSTRAYIISKGIDANRI 788

Query: 310 SKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
               G+   RL          S+  +  NRR + ++ +
Sbjct: 789 QSAIGYGEERLINGCDGSVRCSEANHLLNRRSEFIIVE 826


>gi|307943350|ref|ZP_07658694.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307772980|gb|EFO32197.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 192

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 8/156 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + +++  A ++       +                 L  +        FD  S    
Sbjct: 37  QGAQAKVEVSADELRKAAFDNIKKYPGDNAAEVLPLALKLNQLRQFNVEITFDFDSDRIR 96

Query: 246 PETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           PE+   +  I + L           + GHTDA   +     N +LS  RA +  + L+ +
Sbjct: 97  PESYETVGVIADALHTPYLWGAKFFVVGHTDA---KGDREYNIKLSQRRADAIREALITT 153

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             V  DR+  + G    +L+   +P    NRR+ ++
Sbjct: 154 FRVPADRLEAV-GLGEEQLRDPENPDAEVNRRVQLI 188


>gi|213964024|ref|ZP_03392268.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
 gi|213953356|gb|EEB64694.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
          Length = 635

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD + S   P+  V L KI EV+    ++   IR HTD+         N  LS 
Sbjct: 520 DIKEIYFDLNKSDIRPDAAVELAKIVEVMKEYPKMKIDIRSHTDSR---ASDAYNLALSD 576

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            RA S  + ++K G+   R++   G+   RL          ++  + ANRR + +V +
Sbjct: 577 RRAKSTLEWIVKQGIERKRLTA-KGYGETRLVNGCSNGVPCTEEEHQANRRSEFIVVN 633


>gi|325955085|ref|YP_004238745.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437703|gb|ADX68167.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 474

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 46/143 (32%), Gaps = 13/143 (9%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           + G   +     V    +   I   + +      FD  S      +   L    EV+   
Sbjct: 332 IPGPPTNLGCPEVETVVSADQIAGLLTETIQGIEFDYDSDKIRQVSYSKLDNAAEVIMKH 391

Query: 263 TEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                 + GHTDA         N  LS  RA S  + L+  GV+  ++  I G     LK
Sbjct: 392 PNYNFWVEGHTDA---AGPDAYNQNLSERRAASVVRYLVNKGVNSAQLFPI-GKGESELK 447

Query: 322 IA------SDPMNS--ANRRIDI 336
                   + P      NRR+  
Sbjct: 448 HPECNPTTNCPAWKNLENRRVVF 470


>gi|294139328|ref|YP_003555306.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293325797|dbj|BAJ00528.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 277

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 8/146 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +      +    +        I  +        +F   S   L E   V++ +   L 
Sbjct: 135 KLVEETSLVDDRVSIDLHGLTDKIAQTGHVALEGLLFKFDSDEMLLEATPVVEVVATYLK 194

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318
               +   + GHTD          N  LS  RA +  + L+    V + ++    G   +
Sbjct: 195 SHPKQSFYVIGHTDDL---GKQSYNQVLSNKRAKAVVKQLLSVYKVPKSQLEA-KGIGEY 250

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
                +        NRR+++++    
Sbjct: 251 SPVANNSNDAGQKLNRRVELVLRSDN 276


>gi|196231290|ref|ZP_03130149.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
 gi|196224626|gb|EDY19137.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
          Length = 316

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 88/281 (31%), Gaps = 12/281 (4%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           F  F K        +      P +  +  I           +         + ++ +   
Sbjct: 38  FFNFKKLENFGYTTVDRPAITPIKMVRVNITEPPAAESKTETTPKTPVKPIKIEETKPFA 97

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           + +    ++        +  ++ +       ++ +     +        L +   +  + 
Sbjct: 98  DEVDLKPSAPDVSPLVPAKPKNLDLSGFETPASSVAALEKQLSAKPGAILDQSLAVGRQP 157

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           K +L    K     +    +      +              I  +   +F+   +  LP+
Sbjct: 158 KIKLPAGPKGGEGGVGSDGSIPGRASLNDALGNVGAFNNKPIAMQGGALFEWGKAELLPQ 217

Query: 248 TIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
            I  LQK+ +++  +      I GHTD +        N  LS  RA S    L+ + G+ 
Sbjct: 218 AIQNLQKLAQLIRLNPKATFIISGHTDHT---GTHEGNLILSQQRADSVRDWLVANLGID 274

Query: 306 EDRISKISGFAHHR--L-KIASDP--MNSANRRIDILVEDR 341
             RI+ + G A                 + NRR++I+++ R
Sbjct: 275 PMRITTV-GKADDEAFPNLGPDKSIEEQAPNRRVEIVIKTR 314


>gi|194333585|ref|YP_002015445.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311403|gb|ACF45798.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
           DSM 271]
          Length = 153

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
           Q +   +   SS+    +   L++  + +  + E  + + GH D          N  L  
Sbjct: 46  QLDDVFYAFDSSVLDMASQNQLKENAQWMMDNPEAAVIVEGHCDER---GTNEYNIALGE 102

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
            RA SA   L+  GV   R+  +S +   R       +   + NRR   +V+
Sbjct: 103 RRADSAKSYLVNLGVDASRMQTVS-YGEERPFDPGHDEAAWAKNRRAHFVVQ 153


>gi|119898879|ref|YP_934092.1| outer membrane protein A [Azoarcus sp. BH72]
 gi|119671292|emb|CAL95205.1| outer membrane protein A precursor [Azoarcus sp. BH72]
          Length = 238

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 16/119 (13%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +          + +  GHTD          N +LS  RA +
Sbjct: 124 LFDFDKAVLKPEGRTKLDDLAAKAKGIKLEVILAVGHTDRL---GSDSYNQKLSERRAAA 180

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +R+    G    +    +   +  N           RR+++ V   +
Sbjct: 181 VKTYLVSKGVEANRVYT-EGKGEKQPVTGNKCDSVKNRKALIECLQPDRRVEVEVIGSK 238


>gi|238750181|ref|ZP_04611684.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
 gi|238711725|gb|EEQ03940.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
          Length = 560

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTEVIS- 267
           ++K V  +      +      R  P+FD +SS   P  +T  +L+ +  +L  + +    
Sbjct: 421 LLKRVNHKIETYTNVPKFSSARMAPLFDSNSSKLKPNKQTNDILKSLLYLLEKNPDTKVL 480

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I GH+D +        N +LS  RA      L+K+         + G        +++  
Sbjct: 481 IIGHSDNT---GSPSFNMKLSEQRAQVVGDWLIKNSSIPVNNLIVRGKGALEPIASNNTK 537

Query: 327 -MNSANRRIDILVEDRQ 342
                NRR+++L+   Q
Sbjct: 538 IGQDQNRRVEVLLLPTQ 554


>gi|148368|gb|AAA24807.1| outer membrane protein II [Enterobacter aerogenes]
          Length = 238

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 119 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 175

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  ++I    G             +    +A       +RR++I 
Sbjct: 176 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGSTCDNVKPRAALIDCLAPDRRVEIE 234

Query: 338 VED 340
           V+ 
Sbjct: 235 VKG 237


>gi|302337004|ref|YP_003802210.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634189|gb|ADK79616.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 405

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 12/161 (7%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              ++ +      + +   L   +A+N +          G++IS+        F   S++
Sbjct: 252 ATARQVRSRSMDKETVKDELERRIAENGIPDAGVRVGDDGVIISL----ENIQFKADSAV 307

Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           PLP  +  L+++  +L    +    + GHT        A     LSL+RA +    L   
Sbjct: 308 PLPGEMDKLKRVVSLLKLYPDRDILVTGHT---ALAGTAEGRMALSLERARTVAAFLKDE 364

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
             + +DR+  I G         +D       NRR++I + +
Sbjct: 365 LNIDDDRLM-IEGKGAGAPVAPNDTEEGKRKNRRVEITILE 404


>gi|255262798|ref|ZP_05342140.1| OmpA domain protein [Thalassiobium sp. R2A62]
 gi|255105133|gb|EET47807.1| OmpA domain protein [Thalassiobium sp. R2A62]
          Length = 176

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F   +S         L      L  +++    + GH D          N  L   R
Sbjct: 66  DRVLFTVDTSSLTAAGRSTLDGQATWLLTNSDYLAVVEGHADEQ---GTREYNLALGARR 122

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR-IDIL 337
           A +  + L+  GV  +R+  +S +   R     + +   + NRR + I+
Sbjct: 123 ANAVREYLISRGVPSNRLRTVS-YGKERPTEICSEEACYAKNRRAVTII 170


>gi|189424872|ref|YP_001952049.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
 gi|189421131|gb|ACD95529.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
          Length = 185

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLD 290
            T  FD   S    ++  +L K  + L        I I GH D          N  L   
Sbjct: 78  QTVYFDFDRSDLRQDSRDMLTKNAQALMKDLVDSKIKIEGHCDER---GSDEYNLALGDR 134

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           RA +    L+  GV +DRIS +S F   +  +  + +   S NRR + ++
Sbjct: 135 RAKAVATYLITLGVKQDRISTVS-FGKEKPAMQGSDETAWSKNRRAEFVI 183


>gi|183222022|ref|YP_001840018.1| hypothetical protein LEPBI_I2664 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912089|ref|YP_001963644.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167776765|gb|ABZ95066.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780444|gb|ABZ98742.1| Putative outer membrane protein; putative signal peptide
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 618

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            N   F   SS    E+   L ++  +L  +T   + I GHTD          N +LSL+
Sbjct: 509 MNNLFFAFRSSEFAKESEPELDRLAGILKKTTNLKVLIEGHTDNV---GTKSANQKLSLE 565

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           RA S    L  K  + + RI  + G         +        NRR+   + +
Sbjct: 566 RANSVAFYLKSKHKIEDSRI-SVVGLGPSNPIAENGSEEGRAVNRRVVFKILE 617


>gi|123442919|ref|YP_001006894.1| hypothetical protein YE2703 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089880|emb|CAL12736.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 556

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267
           ++  +  +      + +    +  PMFD +S    P           +L    H    + 
Sbjct: 417 LLNKINHQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 476

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GH+D +     A  N  +S  RA      L+K+         I G        ++D  
Sbjct: 477 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 533

Query: 328 NS--ANRRIDILVE 339
                NRR+++L+ 
Sbjct: 534 AGQDQNRRVEVLLL 547


>gi|17986623|ref|NP_539257.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
           str. 16M]
 gi|23502553|ref|NP_698680.1| Pal family lipoprotein [Brucella suis 1330]
 gi|62290567|ref|YP_222360.1| Pal family lipoprotein [Brucella abortus bv. 1 str. 9-941]
 gi|82700483|ref|YP_415057.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
           2308]
 gi|148560405|ref|YP_001259548.1| outer membrane lipoprotein Omp16 [Brucella ovis ATCC 25840]
 gi|161619624|ref|YP_001593511.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
 gi|163845274|ref|YP_001622929.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
 gi|189024786|ref|YP_001935554.1| outer membrane protein [Brucella abortus S19]
 gi|225853150|ref|YP_002733383.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
           23457]
 gi|237816073|ref|ZP_04595069.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
 gi|254694357|ref|ZP_05156185.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698015|ref|ZP_05159843.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254703474|ref|ZP_05165302.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
 gi|254708437|ref|ZP_05170265.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M163/99/10]
 gi|254708710|ref|ZP_05170521.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
 gi|254719698|ref|ZP_05181509.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
 gi|254730899|ref|ZP_05189477.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 4 str.
           292]
 gi|256030236|ref|ZP_05443850.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M292/94/1]
 gi|256045306|ref|ZP_05448200.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256061733|ref|ZP_05451870.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
 gi|256114264|ref|ZP_05455009.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
           str. Ether]
 gi|256160411|ref|ZP_05458100.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
 gi|256255617|ref|ZP_05461153.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
 gi|256263357|ref|ZP_05465889.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
           str. 63/9]
 gi|256370104|ref|YP_003107615.1| lipoprotein, Pal family [Brucella microti CCM 4915]
 gi|260167911|ref|ZP_05754722.1| lipoprotein, Pal family [Brucella sp. F5/99]
 gi|260547188|ref|ZP_05822926.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
 gi|260565803|ref|ZP_05836286.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
           16M]
 gi|260568781|ref|ZP_05839249.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
 gi|260758616|ref|ZP_05870964.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
 gi|260762448|ref|ZP_05874785.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
 gi|261214665|ref|ZP_05928946.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
 gi|261222819|ref|ZP_05937100.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
 gi|261315938|ref|ZP_05955135.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M163/99/10]
 gi|261316200|ref|ZP_05955397.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
 gi|261325736|ref|ZP_05964933.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
 gi|261754103|ref|ZP_05997812.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
 gi|261757348|ref|ZP_06001057.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
 gi|265984712|ref|ZP_06097447.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
 gi|265987263|ref|ZP_06099820.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M292/94/1]
 gi|265991730|ref|ZP_06104287.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265995567|ref|ZP_06108124.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
           str. Ether]
 gi|265998778|ref|ZP_06111335.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
 gi|306837843|ref|ZP_07470705.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
 gi|306841414|ref|ZP_07474116.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
 gi|61229452|sp|P0A3S7|OMP16_BRUME RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
           kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
           outer membrane protein omp16; Flags: Precursor
 gi|61229453|sp|P0A3S8|OMP16_BRUSU RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
           kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
           outer membrane protein omp16; Flags: Precursor
 gi|61229455|sp|P0A3S9|OMP16_BRUAB RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
           kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
           outer membrane protein omp16; Flags: Precursor
 gi|13898977|gb|AAK48919.1|AF358662_6 Pal protein [Brucella melitensis]
 gi|538293|gb|AAA59360.1| Omp16 [Brucella abortus bv. 1]
 gi|17982237|gb|AAL51521.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
           str. 16M]
 gi|23348553|gb|AAN30595.1| lipoprotein, Pal family [Brucella suis 1330]
 gi|62196699|gb|AAX74999.1| lipoprotein, Pal family [Brucella abortus bv. 1 str. 9-941]
 gi|82616584|emb|CAJ11663.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
           [Brucella melitensis biovar Abortus 2308]
 gi|148371662|gb|ABQ61641.1| outer membrane lipoprotein Omp16 (Minor outer membraneprotein
           omp16) (16 kDa OMP) (16.5 kDa minor OMP) [Brucella ovis
           ATCC 25840]
 gi|161336435|gb|ABX62740.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
 gi|163675997|gb|ABY40107.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
 gi|189020358|gb|ACD73080.1| Bacterial outer membrane protein [Brucella abortus S19]
 gi|225641515|gb|ACO01429.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
           23457]
 gi|237788736|gb|EEP62948.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
 gi|256000267|gb|ACU48666.1| lipoprotein, Pal family [Brucella microti CCM 4915]
 gi|260095553|gb|EEW79431.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
 gi|260151176|gb|EEW86271.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
           16M]
 gi|260154165|gb|EEW89247.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
 gi|260668934|gb|EEX55874.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
 gi|260672874|gb|EEX59695.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260916272|gb|EEX83133.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
 gi|260921403|gb|EEX88056.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
 gi|261295423|gb|EEX98919.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
 gi|261301716|gb|EEY05213.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
 gi|261304964|gb|EEY08461.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M163/99/10]
 gi|261737332|gb|EEY25328.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
 gi|261743856|gb|EEY31782.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
 gi|262553467|gb|EEZ09236.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
 gi|262766851|gb|EEZ12469.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
           str. Ether]
 gi|263002686|gb|EEZ15089.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263093357|gb|EEZ17426.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659460|gb|EEZ29721.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
           M292/94/1]
 gi|264663304|gb|EEZ33565.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
 gi|306288520|gb|EFM59872.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
 gi|306407082|gb|EFM63299.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
 gi|326409709|gb|ADZ66774.1| Bacterial outer membrane protein [Brucella melitensis M28]
 gi|326539416|gb|ADZ87631.1| peptidoglycan-associated lipoprotein [Brucella melitensis M5-90]
          Length = 168

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167


>gi|297564278|ref|YP_003683251.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848727|gb|ADH70745.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 534

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 69/234 (29%), Gaps = 23/234 (9%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
            +  G TN+  +Y     +         S     +     +  ++     D   + +   
Sbjct: 139 PVHDGVTNEYVRYFPRLPDEVRQVTFVGSGLGAMTGIPVVDVEEERADPQDPNGADHLTP 198

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +   P          +           + S +   +                 +IS+   
Sbjct: 199 DDPPPSGENLTFANRRPDADAVADEGWVQSFVDSEI-------ASTTRDGDREIISLHSD 251

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNWRL 287
               MF+   S    E   V+++    LA + +       + GHTD+         N  L
Sbjct: 252 ---VMFEFDRSDLTSEAEDVVRRAATSLARNVDPDEPVITVIGHTDSI---GDDAYNDNL 305

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSANRRIDI 336
           S+ RA S   +L +  +  D   ++ G   H           D   + NRR++ 
Sbjct: 306 SVQRAESVRDLLAEE-LGTDYTLEVEGRGEHEPIAREGGPDDDEARARNRRVEF 358


>gi|313500575|gb|ADR61941.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 162

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D     +F         ++  ++++IG+ L     + + + GH D+      A  N +L
Sbjct: 51  YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 107

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S  RA S  + L+  G+    I    G    +    +        NRR+ I+V
Sbjct: 108 SERRAQSVTKALVGVGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 159


>gi|254355979|ref|ZP_04972256.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|148024962|gb|EDK83131.1| OmpA family protein [Burkholderia mallei 2002721280]
          Length = 560

 Score = 83.5 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I+ TL   +   + +G L         + +        FD   +    + +  ++++G 
Sbjct: 347 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 404

Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307
             A     + + GHTD+ P R     DN  LS  RA +    L K+ +            
Sbjct: 405 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 464

Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           R  + SG    +    +    +   NRR+D+L
Sbjct: 465 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 496


>gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 369

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++        ++++   L  + E    I GH
Sbjct: 234 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 293

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  Q+L++  G+S+ R++  +G+   +  +A D     
Sbjct: 294 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISQSRVTS-NGYGVTQPLVAGDSKEAY 349

Query: 329 SANRRIDILVE 339
           +ANRRI+ +V 
Sbjct: 350 AANRRIEAIVT 360


>gi|114320567|ref|YP_742250.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226961|gb|ABI56760.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 326

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F  +S+  LP++   L+ I E+++   +  + + GHTD++        N  LS++R
Sbjct: 218 QNILFAVNSAEILPDSADALEAIAELMSEQPDLTLLVVGHTDST---GDYDYNLTLSMER 274

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           A +  + L  + G+  DR+    G        ++      + NRR++++
Sbjct: 275 AEAVVRWLQREHGIDGDRLQAA-GAGMMAPVTSNRTEAGRAENRRVELV 322


>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
 gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
          Length = 362

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N +LS
Sbjct: 234 KSDVLFNFNKATLKPEGKQALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSEAYNQKLS 290

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  ++IS   G             +    +A       +RR++I 
Sbjct: 291 TQRAQSVVDYLVSKGIPANKISA-RGMGKSDPVTGSTCNNVKARAALIDCLAPDRRVEIE 349

Query: 338 VED 340
           V+ 
Sbjct: 350 VKG 352


>gi|262277489|ref|ZP_06055282.1| OmpA family protein [alpha proteobacterium HIMB114]
 gi|262224592|gb|EEY75051.1| OmpA family protein [alpha proteobacterium HIMB114]
          Length = 155

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +   F  + S     +   L K    +  S   + + GH D          N  L   R
Sbjct: 49  PDRVFFATNKSGLHTASKSTLNKQAAYIKSSGISVVVEGHADER---GTREYNLALGERR 105

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A +    LM  GVS   +  +  +   R           S NRR  + V+ +
Sbjct: 106 ANAVRDYLMSQGVSGSNV-TVISYGKERPVNPESSRLAWSQNRR-SVTVKAK 155


>gi|149914118|ref|ZP_01902649.1| OmpA family protein [Roseobacter sp. AzwK-3b]
 gi|149811637|gb|EDM71470.1| OmpA family protein [Roseobacter sp. AzwK-3b]
          Length = 181

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S+         L          +   +I GHTD+         N  LSL RA +  
Sbjct: 84  FATDSARLGHSARQNLANFFASTGAVS--YTIVGHTDSR---ASDEYNMDLSLRRANAVA 138

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            V   +G    RI+ + G      K +++     +ANRR++IL
Sbjct: 139 SVARSTG---ARIADVRGMGERAPKASNNTAAGMAANRRVEIL 178


>gi|78046418|ref|YP_362593.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034848|emb|CAJ22493.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 400

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 77/278 (27%), Gaps = 20/278 (7%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            K   + +                 I+   +       +D++            L +   
Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINAIGEGGSGGALIDVQSDGGGTYNGPAGLISLDG 190

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189
             + +  SE       R    G        +  + +    +  P    +           
Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTVGT 250

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              +     +           + K          + I++ D+    +FD   S   P+  
Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFAPSGAPCGYL-ITLNDR---ILFDFDKSDIRPDAA 306

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL  +G  L   T + + +RGHTDA   +     N  LS  RA +             +
Sbjct: 307 RVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361

Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339
            +   G+   +    +      +P     NRR++I + 
Sbjct: 362 SANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399


>gi|323700000|ref|ZP_08111912.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323459932|gb|EGB15797.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 192

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    E+  +L  I E   + S+  +S+ GHTD        + N+ LS+ RA   
Sbjct: 91  FHSDSTRLTDESKALLPDILESWRSRSSRDVSVVGHTDTL---GEKQYNYDLSVRRAEKV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
             +L+K G+ ED I +++        I +        NRR+++LV 
Sbjct: 148 RDLLVKGGMPED-IIEMTSHGEENPLIPTPDGRSEPRNRRVEVLVR 192


>gi|229522237|ref|ZP_04411653.1| protein F-related protein [Vibrio cholerae TM 11079-80]
 gi|229340222|gb|EEO05228.1| protein F-related protein [Vibrio cholerae TM 11079-80]
          Length = 204

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 49  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFEIGSAKVSM 108

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V+
Sbjct: 109 ASKQWLDTVARFLAAESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197


>gi|126173969|ref|YP_001050118.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|153000261|ref|YP_001365942.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|160874894|ref|YP_001554210.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|217973710|ref|YP_002358461.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|304409838|ref|ZP_07391458.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307304194|ref|ZP_07583947.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|125997174|gb|ABN61249.1| OmpA/MotB domain protein [Shewanella baltica OS155]
 gi|151364879|gb|ABS07879.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|160860416|gb|ABX48950.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|217498845|gb|ACK47038.1| OmpA/MotB domain protein [Shewanella baltica OS223]
 gi|304352356|gb|EFM16754.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306913092|gb|EFN43515.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|315267131|gb|ADT93984.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 289

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +D+  +     +   L ++ E LA     E++ +  +TD+         N ++S  RA S
Sbjct: 184 YDEGGTDLTRFSQQQLSRVQEYLAYDPLVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
                + SG+ +DRI  + G    R   ++D     + NRR+ I +   
Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDMDERARNRRVVIRISKP 288


>gi|330861238|emb|CBX71489.1| hypothetical protein YEW_CQ10840 [Yersinia enterocolitica W22703]
          Length = 239

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305
              +L+ I  +L      IS+ GHTD  P+ +      NW LS DRA ++ + L+  G+ 
Sbjct: 1   MRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGLD 60

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           E ++ ++ G A           +  NRRI ILV ++Q
Sbjct: 61  EGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 97


>gi|262274869|ref|ZP_06052680.1| outer membrane protein [Grimontia hollisae CIP 101886]
 gi|262221432|gb|EEY72746.1| outer membrane protein [Grimontia hollisae CIP 101886]
          Length = 197

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P     L+++ + L    +  ++I GH            N  LS  RA + 
Sbjct: 79  FANDSSALRPSNYAKLEQLADFLNDQRDAHVTIEGHASKV---GNPDYNLSLSQRRANAV 135

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
            + L+   G++  R+  I G+      I  D   +   NRR+
Sbjct: 136 ARALINDFGIAPSRVDAI-GYGDTEPLIDEDSEYAHDVNRRV 176


>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
 gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
          Length = 389

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +FD + S   PE +  L  +   L         + + G+TD          N  LS  
Sbjct: 265 DVLFDFNKSALKPEGLTQLDDLYSQLSSINPKNGSVLVLGYTDRM---GKEAYNQALSQR 321

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDILVE 339
           RA S    L+  G+  D+IS   G              D   +A       +RR+ I V+
Sbjct: 322 RAQSVMDYLITKGIPADKISA-RGMGEANPVTGSTCGDDMKRAAKIECLAPDRRVVIEVK 380

Query: 340 DRQ 342
             +
Sbjct: 381 GEK 383


>gi|302038649|ref|YP_003798971.1| peptidoglycan-associated lipoprotein pal [Candidatus Nitrospira
           defluvii]
 gi|300606713|emb|CBK43046.1| Peptidoglycan-associated lipoprotein Pal (modular protein)
           [Candidatus Nitrospira defluvii]
          Length = 250

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 71/251 (28%), Gaps = 28/251 (11%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
           S+  I    D   T+  +    G              +   + +       +        
Sbjct: 25  SKKSIQSGGDAQSTERGMAKSGGPAPSAMGSTGGVGGMEPPAATFPDLSLSSKPDDLETG 84

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G     S    K+ ++E       +  +   +    ++++D+ ++ +   +      +  
Sbjct: 85  GLRGFDSVSGGKAPSEERLGGGGTMLAKVEPSESTARQIEDIRREQAKEQAASAEAGLRD 144

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
                                  F   S     E    L +  + +  +    + I GH 
Sbjct: 145 ---------------------VFFGYDSWTITEEGRQSLTQDAQWIKANAGALVKIEGHC 183

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA 330
           D          N  L   RA +    L++ GV  +R+  +  +   R      ++     
Sbjct: 184 DER---GTLAYNLVLGEKRAKAVRNYLVELGVGANRL-AVVSYGKERPFCNERNESCYQQ 239

Query: 331 NRRIDILVEDR 341
           NRR  ++V  +
Sbjct: 240 NRRGHVVVRSK 250


>gi|260914347|ref|ZP_05920816.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
 gi|260631448|gb|EEX49630.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
          Length = 341

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE   VL  I   +A   +  +++ G+TD          N +LS  RA + 
Sbjct: 228 FAFDKANLKPEAQGVLDGIYGEIAQLQSASVAVAGYTDRL---GSDAYNLKLSQRRADTV 284

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342
              L+  GV+   IS  +G         +  D +            +RR++I V+  +
Sbjct: 285 ANYLVSKGVAPQAISA-TGMGESSPVTGNKCDSVKGRKALIACLADDRRVEISVKGNK 341


>gi|255321985|ref|ZP_05363135.1| OmpA family protein [Campylobacter showae RM3277]
 gi|255301089|gb|EET80356.1| OmpA family protein [Campylobacter showae RM3277]
          Length = 192

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 9/151 (5%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++     +  +    ++    +        ++ SI  Q  T  FD        +    + 
Sbjct: 45  EVDMSADANQNMGGMNSSDNMMSDSERLQQLISSIEGQVQTVYFDFDKFNIKGDMQSAIN 104

Query: 254 KIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
               +   S      + + G+ D          N+ L L RA +A   L+K GV+ DRI+
Sbjct: 105 TNAGLFNQSEAQALSVKVEGNCDEW---GTDEYNYALGLKRAKAAKDALVKQGVAADRIT 161

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVE 339
            +S +               + NRR +  V 
Sbjct: 162 VVS-YGESNPVCTDKTKACDAQNRRAEFKVL 191


>gi|94264973|ref|ZP_01288744.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93454576|gb|EAT04854.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 192

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNW 285
              D      FD   S    +    +   GE +L + T  + + G+TD          N 
Sbjct: 80  RTSDPLLPVYFDFDRSHIRGDQEERITHNGEYMLDNRTVRVRVEGNTDER---GTREYNM 136

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
            L   RA SA + LM  G++  R+  +S +   R       +   S NRR+D ++  
Sbjct: 137 ALGERRAMSAKKYLMDMGIASGRLETVS-YGEERPIAFGQDEESWSLNRRVDFVILR 192


>gi|77165349|ref|YP_343874.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|254434450|ref|ZP_05047958.1| OmpA family protein [Nitrosococcus oceani AFC27]
 gi|76883663|gb|ABA58344.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|207090783|gb|EDZ68054.1| OmpA family protein [Nitrosococcus oceani AFC27]
          Length = 466

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 18/232 (7%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             ++            Q      S     +    +      +    +     +  L +E 
Sbjct: 218 DSEKGWKVGGVAVRDIQRGAEVFSRIAQGDIQGAIEMIRPHDPQERERLREQVRQLQREL 277

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI----------LISIIDQR 232
                 ++R ++  + IS           +        R  +           I +    
Sbjct: 278 ERWRPIEERQREHERIISEVARRSAEQLGLGSRRQTVPRFKLPEPRLDLRSARIQLGTTF 337

Query: 233 NTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  +  F   S+   P     L  +   +  +    I I G+ D +        N RLS 
Sbjct: 338 HWILDRFRLESAALEPHHRRQLNDLANQVKSNPYAEIEIVGYADTT---GPLAFNQRLSE 394

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
            RA +    L+  GV   +I   SG       +    +   + NRR++I   
Sbjct: 395 QRANAVCDYLLSRGVEGSKIKSASGRGEGEPLVPERAEADRARNRRVEIFFR 446


>gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175]
          Length = 369

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++        ++++   L  + E    I GH
Sbjct: 234 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 293

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  Q+L++  G+S++R++  +G+   +  +A D     
Sbjct: 294 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISKNRVTS-NGYGVTQPLVAGDSKEAY 349

Query: 329 SANRRIDILVE 339
           +ANRRI+ +V 
Sbjct: 350 AANRRIEAIVT 360


>gi|126731561|ref|ZP_01747367.1| OmpA/MotB [Sagittula stellata E-37]
 gi|126708097|gb|EBA07157.1| OmpA/MotB [Sagittula stellata E-37]
          Length = 220

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +F  +S    PE +  L  + + L     S   +   GHTD       A  N  LS  RA
Sbjct: 114 LFAYNSDDLTPEAMGKLSSLADALRDPRLSDARLVFIGHTDGV---GSAAYNMDLSRRRA 170

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            +  + +    G+   RI +  G    RLK + DP  + NRR+ +++
Sbjct: 171 EAVARFVQGTMGLPPSRI-RAEGVGFSRLKNSFDPAAAQNRRVQLVL 216


>gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155]
          Length = 363

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++        ++++   L  + E    I GH
Sbjct: 228 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 287

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  Q+L++  G+S++R++  +G+   +  +A D     
Sbjct: 288 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISKNRVTS-NGYGVTQPLVAGDSKEAY 343

Query: 329 SANRRIDILVE 339
           +ANRRI+ +V 
Sbjct: 344 AANRRIEAIVT 354


>gi|118591499|ref|ZP_01548896.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614]
 gi|118435827|gb|EAV42471.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614]
          Length = 193

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 8/156 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              ++++   A ++       +                 L S+        FD  S+   
Sbjct: 37  QGAQQKVDLTADELQQAALENIQKYPGANAPNTLPLADKLASLRQFNVEITFDFDSARIR 96

Query: 246 PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           PE+   +  I + L       +   I GHTDA   +     N  LSL RA +  + L+ +
Sbjct: 97  PESFETVGLIADALHTPYLQGQTFFIVGHTDA---KGAREYNLELSLKRAQAVREALVTT 153

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             V  + +  + G    +L+  ++P  + NRR+ ++
Sbjct: 154 FRVPGEYLFAV-GLGEEQLRDPANPDAAVNRRVQLI 188


>gi|332285773|ref|YP_004417684.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
 gi|330429726|gb|AEC21060.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
          Length = 266

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 14/116 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S++     +  ++ +   L      E +++ GHTD          N RLS  RA S
Sbjct: 155 FAFGSAVLTTAGLSTVRDVATQLKQLSKLEQVAVAGHTDRIGDAGA---NQRLSQQRAES 211

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDRQ 342
               L+  G+    + +  G+   R  +  D  +        + NRR+DI V+ ++
Sbjct: 212 VRNALVAQGIPSSAV-RAQGYGESRPAVQCDQQDRNDLIACLAPNRRVDIEVQGQR 266


>gi|146305280|ref|YP_001185745.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145573481|gb|ABP83013.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 317

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 8/140 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L     +  +  V     + G+            FD   +    ++   L +I ++L  
Sbjct: 178 VLERKAMEQRMVLVEAGELQRGLDAQGRVALYGLYFDTDKADMRADSQPQLAEIAKLLQA 237

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319
           S +  + + GHTDA         N  LS  RA S  + L+   G++  R+S + G     
Sbjct: 238 SAQLQVLVVGHTDAQ---GALDYNRDLSQRRAQSIVEALVSQHGIARQRLSAV-GVGMAA 293

Query: 320 LKIAS--DPMNSANRRIDIL 337
              ++  +   + NRR++++
Sbjct: 294 PVASNRDEAGRALNRRVELV 313


>gi|262066235|ref|ZP_06025847.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291380091|gb|EFE87609.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 82

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +  +   +++ GHTD+       + N  LS  RA +    L++ G++E+RI  I      
Sbjct: 1   IEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEE 57

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
                ++       NRR++  +  R
Sbjct: 58  YPVATNETPEGRLQNRRVEFRLVQR 82


>gi|163866830|gb|ABY47585.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 341

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336


>gi|163866828|gb|ABY47584.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 333

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    +        NRR+
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 328


>gi|187250732|ref|YP_001875214.1| outer membrane protein [Elusimicrobium minutum Pei191]
 gi|186970892|gb|ACC97877.1| Outer membrane protein [Elusimicrobium minutum Pei191]
          Length = 174

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S         +L K+   +     +   + GHTD          N  LS  RA + 
Sbjct: 65  FEFDSVHLAASAYPILDKVAGFMVGRQHIKLIVEGHTDNV---GSDEYNDWLSEARAIAV 121

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
              ++  GV  D I  + GF   R     D     + NRRI   V DR
Sbjct: 122 KSYIVSRGVHPDSIK-VYGFGKRRPLTLDDSIEGRATNRRIVFTVTDR 168


>gi|75676898|ref|YP_319319.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74421768|gb|ABA05967.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 167

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K    L        +I GH D          N  L   R
Sbjct: 59  DRVFFESDQTSLSPQAITTLEKQAHWLQTYHRYSFTIEGHADER---GTREYNIALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 116 AQSVRSFLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRR 158


>gi|129307156|gb|ABO30516.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 337

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336


>gi|27382260|ref|NP_773789.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
           110]
 gi|27355431|dbj|BAC52414.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
           110]
          Length = 162

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ IV L+K  + L        +I GH D          N  L   R
Sbjct: 54  DRVFFESDQTDLTPQAIVTLEKQAQWLQTYPRYSFTIEGHADER---GTREYNIALGARR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+  +R+  IS +   R     +D    S NRR
Sbjct: 111 AQSVRSFLASRGIDANRMRTIS-YGKERPVAVCNDISCWSQNRR 153


>gi|297183997|gb|ADI20117.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [uncultured alpha proteobacterium
           EB080_L06A09]
          Length = 613

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+ I       F+    +   +   V++ I +VL    E    I+GHTD+         N
Sbjct: 492 INTIISNTKIRFEPGKVVLNDDNFTVIKLIADVLRTCPEAKFEIQGHTDS---SGSEELN 548

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             LS  RA +    L+   V    IS   G+        +        NRRI+I + +
Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLVE 605


>gi|94499177|ref|ZP_01305715.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Oceanobacter sp. RED65]
 gi|94428809|gb|EAT13781.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Oceanobacter sp. RED65]
          Length = 294

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLS 288
            R+   F    +    +    L  I   +    EV    I GH+DA        +N RLS
Sbjct: 174 SRSKVFFPGGGAALDKQARKKLDLIALYVKADPEVQAIYIDGHSDAL---GRRYNNRRLS 230

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            DRA    + L++ G+  + I             ++      + NRR+ I +E  
Sbjct: 231 EDRALKVNEYLIERGLDAE-IITTRYHGERYPVASNATAAGRAQNRRVTIRLEKP 284


>gi|262364585|gb|ACY61142.1| OmpA domain protein [Yersinia pestis D182038]
          Length = 987

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 807 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 862

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 863 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 922

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 923 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 957


>gi|332306543|ref|YP_004434394.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173872|gb|AEE23126.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 366

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD +SS         +Q+  + +       ++  G+  A       + N +LS++RA +
Sbjct: 254 LFDNNSSKLKNIDSASVQEFVDFMRRYGSTDAVIEGYASA---PGTEQYNMKLSVERAEA 310

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
             Q L++   +   R+  + G+   +L   ++   +   NRRI+  V  
Sbjct: 311 VRQYLVEQYNIDSARLEAV-GYGETKLLDKANTREAHQKNRRIEAYVTA 358


>gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 369

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    ++  GV+   ++ + G+        +  D + +          +RR++I V
Sbjct: 303 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDALKARKSLIVCLAPDRRVEIQV 361

Query: 339 EDRQ 342
           +  +
Sbjct: 362 QGSK 365


>gi|110598823|ref|ZP_01387080.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
 gi|110339554|gb|EAT58072.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
          Length = 155

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               +D   S    + +  L    + +  +  + + + GH D          N  L   R
Sbjct: 50  GDVFYDFDKSALRSDAVSQLNTNADWMKANRAKSVVVEGHCDER---GTNEYNLALGERR 106

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +A   ++  GV   R+  +S F   +   A       + NRR
Sbjct: 107 ANAAKDYIVNLGVDASRLKTVS-FGEEKPFAAGSTEEAWAQNRR 149


>gi|300716419|ref|YP_003741222.1| type IV / VI secretion system family protein, DotU [Erwinia
           billingiae Eb661]
 gi|299062255|emb|CAX59372.1| Type IV / VI secretion system family protein, DotU [Erwinia
           billingiae Eb661]
          Length = 408

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           +F++  S   P    ++ ++   + +    + +  +TD  P R      N+  SL +A++
Sbjct: 287 LFNRGGSDLTPAGRAIMVRVAAAMDNIKGTLQVSVYTDNQPQRTARFPSNYEYSLAQAHT 346

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              +L +  +    + +  G       + +D     + NRR++IL+
Sbjct: 347 LTSLLQQLMIQPGHMIRGEGRGDSNPLLPNDSQENRAQNRRVEILL 392


>gi|294013407|ref|YP_003546867.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
 gi|292676737|dbj|BAI98255.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
          Length = 170

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             +  +FD        +   +LQ     L  +    ++I GH D          N  L  
Sbjct: 61  SSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADER---GTRDYNIALGE 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339
            RA +A   L   G+   RI+ +S +   R     + +   + NRR + + V+
Sbjct: 118 RRANAAKNYLASLGIDAGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTVQ 169


>gi|300772832|ref|ZP_07082701.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759003|gb|EFK55830.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 650

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D + S   P+   VL ++   +  +    I +  HTD+         N +LS  R
Sbjct: 538 DNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSR---GSDNYNMKLSDRR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A SA   ++  G++++R+    G+   RL          ++  + ANRR ++ V  
Sbjct: 595 AKSAVDYIISKGIAKERLVS-KGYGETRLVNECANGVKCTEEQHQANRRTEVKVLK 649


>gi|218708964|ref|YP_002416585.1| sodium type flagellar protein MotY precursor [Vibrio splendidus
           LGP32]
 gi|218321983|emb|CAV17990.1| Sodium type flagellar protein MotY precursor [Vibrio splendidus
           LGP32]
          Length = 293

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 23/307 (7%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T  M  F ++   +    + +           ++          E             
Sbjct: 5   LITGSM-LFSLLMSSSVLAQEKRYGAS-----PLQSTWEMVANTPLECRLVHPIPNFGDA 58

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
                   K  +D ++         + +       +        + +  +  ++      
Sbjct: 59  EFSSRASKKIILDFELKMRRPMGATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVG 118

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                  +++ E    P  S ++  +  ++  +      +SS L     +     +    
Sbjct: 119 GQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVA-----LSSVLFQEKYNVFSDCIANLL 173

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPF 277
             +   IS         +D++S      +   L +I + + ++ ++  +    +TD+   
Sbjct: 174 PYSFEDISFTILH----YDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDS 229

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           + I+     LS  RA S  +     G+ EDRI ++ G+   R    ++       NRR+ 
Sbjct: 230 KGIS---QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNNSPIGKDKNRRVV 285

Query: 336 ILVEDRQ 342
           I +   Q
Sbjct: 286 ISLGRTQ 292


>gi|37704678|gb|AAR01611.1| OprF [Pseudomonas sp. MFY338]
          Length = 315

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 209 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 268

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 269 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 315


>gi|77465494|ref|YP_354997.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389912|gb|ABA81096.1| OmpA/MotB domain protein [Rhodobacter sphaeroides 2.4.1]
          Length = 254

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 7/207 (3%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
              S + Q+   K            +    D   +   E+    P  S +       +  
Sbjct: 49  AARSGNGQARGLKLVTVDRIGPAPAMADVPDSLGAPAGEDPGLRPTASTDSAPGETGRPV 108

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L  L +      +        +         G+L   +       F   S++   +   +
Sbjct: 109 L-GLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPL 167

Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
           L ++  V+  S      I GHTDA         N +LSL RA    + L    G++ +R+
Sbjct: 168 LAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERL 224

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDI 336
             + G     L    DP +  NRR++ 
Sbjct: 225 RAV-GMGERFLADKKDPRSGENRRVEF 250


>gi|189220464|ref|YP_001941104.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
 gi|189187322|gb|ACD84507.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
          Length = 179

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     F   S+         ++KI + +    +  I + GH D          N  L  
Sbjct: 70  KDQVIYFAFDSAAIPGSERGKIEKIADWMNQHPQLSILLAGHCDER---GTEEYNRGLGE 126

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
            RA +  + L+  G+S ++I  IS +   R           + NRR++
Sbjct: 127 RRAIAVREYLIGLGISAEKIHTIS-YGKDRPIAIGHTEADYAKNRRVE 173


>gi|254230012|ref|ZP_04923412.1| outer membrane protein [Vibrio sp. Ex25]
 gi|151937453|gb|EDN56311.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 288

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           +++RL  L +++   LS          +    +   ++  I    N    F   S+   P
Sbjct: 118 QRRRLNQLEQQLDYVLSQ-TTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINP 176

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L +   +L       + + GH D          N +L+  RA    + L   G++
Sbjct: 177 KYMGHLAEAAYILRDHPNLTLVVTGHAD---VTGAPDYNQKLAQARAEQVKRYLTVFGIT 233

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +R++              +       NRR+ I V    
Sbjct: 234 SERVTT-KSVGDSLPLYEGETPAVRLTNRRVSIEVISPN 271


>gi|78061843|ref|YP_371751.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77969728|gb|ABB11107.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 404

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 12/158 (7%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           R  +L  LA+ +   L   VA   V+ +         L      R + MF    +   P 
Sbjct: 254 RASQLDVLARNLEQQLRDEVAAGNVELIRDSGRNALTL------RFSGMFGPGEATVAPW 307

Query: 248 TIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGV 304
              V+   G  +A  T+   + + G+ D++P  +     N  LS  RA    Q+L+ +GV
Sbjct: 308 GASVVASAGREIAAVTKGATLRVAGYADSTPISSTRQASNQVLSDVRARHVAQILVAAGV 367

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           S  RI  + G         +      + NRR+++ + D
Sbjct: 368 SAPRI-SVEGNGDADSLADNGTASGRARNRRVEVTISD 404


>gi|329888410|ref|ZP_08267008.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
           11568]
 gi|328846966|gb|EGF96528.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
           11568]
          Length = 184

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 9/110 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S     E    L      LA   +  + I G+ D          N  L   R
Sbjct: 74  DRVYFDLDSYSVRAEAQPRLDAQAAWLARYPQVTVRIEGNADER---GTREYNLALGARR 130

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR--RIDIL 337
           A +    L+  GV   RI  IS F   R     +++   + NR  R  I+
Sbjct: 131 AEAVRSYLISRGVPAARIDTIS-FGKERPIAEGSNESAWAQNRNARTAIV 179


>gi|283851028|ref|ZP_06368313.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
 gi|283573674|gb|EFC21649.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
          Length = 263

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 9/152 (5%)

Query: 191 RLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +   L  +I+  +  L++ ++            +G+L+ +    N+ MF   S+   P  
Sbjct: 100 QENKLKYEIALLIKELISSDLSVKNNSGVSNDSSGVLMQVN---NSVMFRTGSAELTPAA 156

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
             VL  +  +L      +++RGH D           W LS  RA +A + L +  G+   
Sbjct: 157 AKVLDGVARILQDFKINLTVRGHADDEEKGGPYPSKWELSAARAAAATRYLAEKTGIPTT 216

Query: 308 RISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           R+  + G A  +  +        + NRRI+  
Sbjct: 217 RLRAV-GLADSQPLVPPTSAENKARNRRIEFF 247



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 1  MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60
          M  + D        ++I ++       ++ GSWK+ YADF+T +MAFFL++W++ +    
Sbjct: 1  MAKNSDGK-----TVVIYRESDEGHGGHHGGSWKVAYADFVTAMMAFFLLLWLVVSLKPQ 55

Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           K+ +   F           + +          +  
Sbjct: 56 RKQELSLVFQDKNVPSKEKVQNLEKVPTFISPDAIK 91


>gi|254486323|ref|ZP_05099528.1| OmpA/MotB [Roseobacter sp. GAI101]
 gi|214043192|gb|EEB83830.1| OmpA/MotB [Roseobacter sp. GAI101]
          Length = 231

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS        +L++    +    E    + GHTDA       R N  L L RA S 
Sbjct: 89  FDFNSSQLDAAAQAILRQQANWIRQFPEVRFRVYGHTDAV---GSNRSNKALGLRRARSV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  F   +  I +     ANRR
Sbjct: 146 VAFLTTQGISTSRLEAVVSFGETQPLIVTQGRERANRR 183


>gi|170739239|ref|YP_001767894.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168193513|gb|ACA15460.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 178

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S          L +  + L      +    + GHTDA         N  LS  RA 
Sbjct: 76  FDYNSDQLTGAAKQNLDEFAKALRDDRLRSSTFLVEGHTDAR---GGEEFNLGLSGRRAD 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
           +  + L   GV   +++   G    R    + P++ ANRR++
Sbjct: 133 AVVRYLSGRGVLAAQLTA-RGLGKSRPLTDN-PLDPANRRVE 172


>gi|37704666|gb|AAR01605.1| OprF [Pseudomonas sp. MFY220]
 gi|37704668|gb|AAR01606.1| OprF [Pseudomonas sp. MFY222]
          Length = 315

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 209 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 268

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 269 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 315


>gi|313497453|gb|ADR58819.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
          Length = 326

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I + +     V  +   GH+D          N  LS  RA +
Sbjct: 179 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLANRDLSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
                  +GV +++I  +           ++     + NRR++I ++ 
Sbjct: 236 VADYFKANGVPDEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 282


>gi|254467600|ref|ZP_05081009.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
 gi|206684348|gb|EDZ44832.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
          Length = 191

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 6/175 (3%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +   +       LS E+I    +K++ + L    SST            V        
Sbjct: 17  MFAPLAQAQSNGSELSVEEITEAFKKQKTRGLVIVPSSTDQSQDTAQETATVAAAAEEYN 76

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282
            +           FD  S+    +    L  + E +         I GHTD+      A 
Sbjct: 77  PVDQQTQINVQISFDFDSAALRADQAPKLANMCESMKLMGGTVFQIIGHTDS---SGSAS 133

Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            N RLSL RA    + L+ S GV ED +  I G          +P    NRR++ 
Sbjct: 134 YNERLSLLRAQEVRRHLISSCGVPEDMLKAI-GMGETAPFNQDNPRADENRRVEF 187


>gi|56461082|ref|YP_156363.1| OprF [Idiomarina loihiensis L2TR]
 gi|56180092|gb|AAV82814.1| Outer membrane porin [Idiomarina loihiensis L2TR]
          Length = 363

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 17/190 (8%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G          +   + E     P  + K +       +    K  ++  +  V +    
Sbjct: 178 GGRDTSPEPRTRPEPRPEPQQAAPEPESKPVDSDGDGVVDSKDKCANTPKNYSVDETGCI 237

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272
               ET    +L+          FD +SS         ++ + E +    +  I+I GHT
Sbjct: 238 LYENETITEELLVE---------FDLNSSNIRSGERSDIKDMAEFMKEHPQLDITIHGHT 288

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329
           D++     A+ N  LS  RA +    L+K  G+ + R+    G    + K+  +      
Sbjct: 289 DST---GEAKYNQWLSERRAEAVANALVKQHGIEKSRVD-FKGHGESQPKVRENSAADRQ 344

Query: 330 ANRRIDILVE 339
            NRRI+  ++
Sbjct: 345 ENRRIEATLK 354


>gi|332161206|ref|YP_004297783.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665436|gb|ADZ42080.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 558

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267
           ++  +  +      + +    +  PMFD +S    P           +L    H    + 
Sbjct: 419 LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 478

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GH+D +     A  N  +S  RA      L+K+         I G        ++D  
Sbjct: 479 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 535

Query: 328 NS--ANRRIDILVE 339
                NRR+++L+ 
Sbjct: 536 AGQDQNRRVEVLLL 549


>gi|318605099|emb|CBY26597.1| putative OMPA family outer membrane porin precursor [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 556

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267
           ++  +  +      + +    +  PMFD +S    P           +L    H    + 
Sbjct: 417 LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 476

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GH+D +     A  N  +S  RA      L+K+         I G        ++D  
Sbjct: 477 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 533

Query: 328 NS--ANRRIDILVE 339
                NRR+++L+ 
Sbjct: 534 AGQDQNRRVEVLLL 547


>gi|117921584|ref|YP_870776.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117613916|gb|ABK49370.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 373

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 8/134 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++   E    ++++   +  + E    I GH
Sbjct: 238 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGH 297

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  ++L++  G+S+ R++  +G+   +  +A D     
Sbjct: 298 ASNV---GKPEYNMVLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDSKEAH 353

Query: 329 SANRRIDILVEDRQ 342
           +ANRRI+ +V   +
Sbjct: 354 AANRRIEAIVTTTE 367


>gi|94971347|ref|YP_593395.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553397|gb|ABF43321.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 605

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S  PLP +I  L ++ + LA +++  I I G+TD          N  LS  RA + 
Sbjct: 496 FASGSDQPLPTSIAALNRLKDELAINSQLAIQIDGYTDDV---GSDILNQPLSEKRALAV 552

Query: 296 YQVLMKSG---VSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +   ++      E R   ++G         +      + NRR++I 
Sbjct: 553 KRYFQQTAPLSFPEMRFKSVAGHGSQNPLADNGTLQGKALNRRVEIT 599


>gi|332852270|ref|ZP_08434075.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
 gi|332870493|ref|ZP_08439257.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
 gi|332729400|gb|EGJ60740.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
 gi|332732230|gb|EGJ63498.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
          Length = 353

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336


>gi|194335385|ref|YP_002017179.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194307862|gb|ACF42562.1| peptidoglycan-associated lipoprotein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 154

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 8/112 (7%)

Query: 226 ISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283
           I II      +F D   S    + +  L+     +         I GH D          
Sbjct: 41  IQIILPGLGDLFYDFDKSDLRADAVEQLKTNANWMQVFKNNSVIIEGHCDER---GTNEY 97

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           N  L   RA SA    +  G+   R+  +S +   +           + NRR
Sbjct: 98  NLALGERRANSARNYTINLGIDPVRLKTVS-YGEEKPFATGSTEEAWAQNRR 148


>gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 351

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    +   PE +  L+ + + +A          + G+TD         +N  LS 
Sbjct: 220 SDVLFAFGKAELKPEGMQALESLYQQIADVKPKDGNAVVMGYTDRI---GSDANNQALSE 276

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    L+  G+  D++  I G         S  D + +          +RR+++ V
Sbjct: 277 ARASTVANFLIGKGLPADKV-SIQGNGESNPVTGSQCDAIKARAALIDCLAPDRRVEVRV 335

Query: 339 EDRQG 343
              QG
Sbjct: 336 TGTQG 340


>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
 gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
          Length = 350

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 18/148 (12%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263
             DN             +       ++  +F+ + +   PE    L ++   L++     
Sbjct: 197 QEDNAPVVAPAPAPAPEVTTKTFTLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKD 256

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322
               + G+TD        + N +LS  RA S    L+  G+  ++IS   G         
Sbjct: 257 GSAVVLGYTDRI---GSEQYNQKLSEKRAQSVVDYLVAKGIPANKISA-RGMGESDPVTG 312

Query: 323 ---ASDPMNSA-------NRRIDILVED 340
               +    +A       +RR+ I V+ 
Sbjct: 313 NTCDNVKARAALIDCLAPDRRVAIEVKG 340


>gi|91978605|ref|YP_571264.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91685061|gb|ABE41363.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 165

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+    L K  + L        +I GH D          N  L   R
Sbjct: 57  DRVFFESDQTELSPQAAATLDKQAQWLQTYNRYSFTIEGHADER---GTREYNIALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 114 AQSVRNYLSSRGIEPSRMRTIS-YGKERPVAVCNDISCWSQNRR 156


>gi|327404631|ref|YP_004345469.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320139|gb|AEA44631.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 798

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 17/124 (13%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I    N   FD +     P+    L KI E++  +  +   +  HTD+         N +
Sbjct: 677 IGLNVNPIYFDYNKWDIRPDAAKELDKIVEIMKKNPNIKIELGSHTDSR---GKDDYNIK 733

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP------------MNSANRRI 334
           LS  RA ++ + ++  G++  RI    G+   +LK++ +              +  NRR 
Sbjct: 734 LSDQRAKASARYIVSKGIAAGRI-TGKGYGETKLKVSDEQINNMPKWDEKEKGHQLNRRT 792

Query: 335 DILV 338
           + ++
Sbjct: 793 EFII 796


>gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582]
 gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582]
          Length = 364

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 19/124 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   S   PE    L ++   L+        + + G+TD          N +LS
Sbjct: 235 KSDVLFNFGKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPV---GKDAANQKLS 291

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMN-----SANRRIDI 336
             RA S    L+  G+  D+IS   G         S                + NRR++I
Sbjct: 292 EARARSVVDYLVSKGIPADKISA-RGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEI 350

Query: 337 LVED 340
            V+ 
Sbjct: 351 EVKG 354


>gi|77464505|ref|YP_354009.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
 gi|77388923|gb|ABA80108.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
          Length = 310

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 12/181 (6%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              E      L   +  A    + ++ L +  +      V D  V           +++ 
Sbjct: 133 EGAEGAEAVSLLISRSDATGFVQVIEALPRTATPPAPVAVPDEPVAAEAPAPAAGTLILR 192

Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           + +     +    F   S+         L  + + L        +  GHTDA        
Sbjct: 193 LEETGAAVLEGLVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            N  LS  RA S  + L+ + GV   +++   G  +   +  +      + NRR+++++ 
Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308

Query: 340 D 340
            
Sbjct: 309 A 309


>gi|86138174|ref|ZP_01056749.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
 gi|85825201|gb|EAQ45401.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
          Length = 194

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 9/172 (5%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK---GVLFETTRTGILI 226
                    S E+I  + ++++ + L    SS  +     +  +    V    T    + 
Sbjct: 23  HAQASSEGQSVEEITKILQQQKTRGLVIAPSSAAAPAPQASDAQETATVATANTDYSPVD 82

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
                     FD  S+   P+    L  +   +         I GHTD+      AR N 
Sbjct: 83  RQSQINLQISFDFDSATLRPDQQPKLVNMCASMQALQGTVFQIIGHTDS---SGSARYNE 139

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           RLSL RA    + L+ + G+ ED +  I G        +++P    NRR++ 
Sbjct: 140 RLSLLRAQEVRRHLISNCGIDEDMLKAI-GMGEAAPYNSANPRADENRRVEF 190


>gi|239501745|ref|ZP_04661055.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB900]
          Length = 349

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 224 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 280

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 281 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 332


>gi|110679377|ref|YP_682384.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455493|gb|ABG31698.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 170

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   P     L+   + L A++     I GH D          N  L   R
Sbjct: 60  DRVLFAVDESSINPAGQTTLEGQAQWLLANTDYTAVIEGHADEQ---GTREYNVALGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +  + L+  GV+ +R+  +S +   R           + NRR
Sbjct: 117 ANAVREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRR 159


>gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius]
          Length = 358

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 230 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337
            +RA S    L+  G+  D+IS   G         +        +A       +RR++I 
Sbjct: 287 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|169794817|ref|YP_001712610.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter baumannii AYE]
 gi|213157857|ref|YP_002320655.1| outer membrane protein A [Acinetobacter baumannii AB0057]
 gi|215482363|ref|YP_002324545.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB307-0294]
 gi|301345435|ref|ZP_07226176.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB056]
 gi|301512590|ref|ZP_07237827.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB058]
 gi|301595016|ref|ZP_07240024.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB059]
 gi|169147744|emb|CAM85607.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter baumannii AYE]
 gi|213057017|gb|ACJ41919.1| outer membrane protein A [Acinetobacter baumannii AB0057]
 gi|213988159|gb|ACJ58458.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
           baumannii AB307-0294]
          Length = 353

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336


>gi|124007657|ref|ZP_01692361.1| outer membrane protein OmpA family, putative [Microscilla marina
           ATCC 23134]
 gi|123986955|gb|EAY26720.1| outer membrane protein OmpA family, putative [Microscilla marina
           ATCC 23134]
          Length = 632

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 8/141 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             +             +       I    +     F   S+I   ++ V LQ + +++ H
Sbjct: 499 AKAYPEFKPYESNTFIKRNGGQTNILAKLKMPHLYFAYKSTILDAQSRVYLQTVYKLMQH 558

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  + +  HTDA         N  LS  RA +    L   G+   +I  + GF   R 
Sbjct: 559 HPDLHLRVEAHTDA---SGTWTSNLLLSEQRAKAVKAFLTDLGIPSGQIV-VKGFGEARP 614

Query: 321 KIASDPMNSANRRIDILVEDR 341
             AS    + NRR+ +  + +
Sbjct: 615 LGAS---AAKNRRVALYFKAK 632


>gi|21666310|gb|AAM73654.1|AF390104_1 outer membrane protein HMP [Acinetobacter baumannii]
          Length = 346

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336


>gi|39995135|ref|NP_951086.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39981897|gb|AAR33359.1| OmpA domain protein [Geobacter sulfurreducens PCA]
 gi|298504165|gb|ADI82888.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
           KN400]
          Length = 194

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
               FD  + +        L +  E L        +SI GH D          N  L   
Sbjct: 87  ERIYFDFDAFVLSQTARDTLSRNAEALLKKMPNAKVSIEGHCDER---GSDEYNLALGEK 143

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           RA +A   L+  GV   R+S IS +   +           + NRR + ++
Sbjct: 144 RAKTAMNYLITLGVPAARLSIIS-YGEEKPLDPGHTEEAWAKNRRDEFVI 192


>gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans']
 gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str.
           'morsitans']
          Length = 356

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 228 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337
            +RA S    L+  G+  D+IS   G         +        +A       +RR++I 
Sbjct: 285 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|148554094|ref|YP_001261676.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148499284|gb|ABQ67538.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 295

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 81/300 (27%), Gaps = 25/300 (8%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           F L M  ++A              P  +  +     + +    P+ S+  K         
Sbjct: 12  FLLAMLAVSA---------AGSL-PAQQQNLNDPNIVVEGVPIPDPSTMTKGPEIKGVIS 61

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +    +K+ + +       + +     S +      +  LT D+           L+ +
Sbjct: 62  ARTGNRIKVTAADGTSTIIGISDATRITSAAGLFGSNRGKLTADALLNGLPVTVKTLQPA 121

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +        ++                A  I +       +              I  
Sbjct: 122 EGQYNALVASQVNFRNSDL--------KTATMIRNATDQRFEEQTAATESLRGALGDIDK 173

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
             I       FD   +    E    L         +   +  + G+TD++        N 
Sbjct: 174 YNIKSTTNVHFDTGKTELSAEDKAHLCSTASTAEATENALMLVVGYTDST---GSDDFNQ 230

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            LS  RA      L ++ G    R+   +G A       +D     + NRR+ + +   +
Sbjct: 231 ELSEKRANRVINYLQQACGWKPYRMLTPTGMAKADPAATNDTPEGKAQNRRVAVNILVSK 290


>gi|304559160|gb|ADM41824.1| Outer membrane protein [Edwardsiella tarda FL6-60]
          Length = 152

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F  + +   PE+   + ++G  L+        + G+TD        + N +LSL R
Sbjct: 45  EKVLFGNNQATLRPESQAHVAELGHALSQVAILHARLDGYTDNY---GTDQYNQQLSLKR 101

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      +   G+    ++   G         +      + NRR+ I+++  
Sbjct: 102 ADKVADAMASGGMPRANLTT-RGMGKSNPIADNATRQGRAENRRVAIVIQAP 152


>gi|300771553|ref|ZP_07081428.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761542|gb|EFK58363.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 650

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D        +   +L ++   +  +    I +  HTD+      AR N +LS +R
Sbjct: 538 ENIYYDLDKYNIREDAKPILNQLVRTMRDNPSLKIELSSHTDSR---ATARYNMKLSQNR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A +A   ++  G++ DRI    G+   +L          S+  + ANRR +I V +
Sbjct: 595 AQAAVDYIVSRGIARDRIVA-KGYGESKLVNKCADGVQCSEAEHQANRRTEIKVLE 649


>gi|37704676|gb|AAR01610.1| OprF [Pseudomonas sp. MFY315]
          Length = 316

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316


>gi|299134179|ref|ZP_07027372.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
 gi|298590926|gb|EFI51128.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
          Length = 162

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   +    + I  L+K  + L        +I GH D          N  L   R
Sbjct: 54  DRVFFDSDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADER---GTREYNIALGAKR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L+  G+S  R+  IS +   R     +D    S NRR
Sbjct: 111 AQSVRNFLVSRGISASRMRTIS-YGKERPVAVCNDISCWSQNRR 153


>gi|83943919|ref|ZP_00956376.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
 gi|83954492|ref|ZP_00963203.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
 gi|83840776|gb|EAP79947.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
 gi|83845166|gb|EAP83046.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
          Length = 174

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE    L      L  +T+  ++  GH D          N  L   R
Sbjct: 64  DRVLFLVDQSNLTPEGQATLDGQAAWLNTNTDYQAVIEGHADEQ---GTREYNLALGARR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +A + L+  G++  R+ ++  +   R           + NRR
Sbjct: 121 ANAAREYLISRGIAASRL-RVVSYGKERPIEVCSSEACYAKNRR 163


>gi|127511243|ref|YP_001092440.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126636538|gb|ABO22181.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 201

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           Q    +F   S    P+    ++ +   +        +I GH   +        N  LS 
Sbjct: 73  QELKILFANDSYYIDPQYYDQVEVVATFMRQYPNTKVTIEGHCSKT---GSYEHNLALSQ 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   +L +  G++ DR++ I G+++ R    +    +   NRR+
Sbjct: 130 NRADAVTSLLSERFGIASDRLTAI-GYSYDRPVDPTHTKMAHTRNRRV 176


>gi|228018095|gb|ACP52726.1| fibronectin-binding protein [Campylobacter coli]
          Length = 211

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRANSV 179

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            + L K GV + RI  + G+   + + ++D   
Sbjct: 180 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 211


>gi|170717767|ref|YP_001784833.1| OmpA domain-containing protein [Haemophilus somnus 2336]
 gi|168825896|gb|ACA31267.1| OmpA domain protein transmembrane region-containing protein
           [Haemophilus somnus 2336]
          Length = 342

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 ++  +    +   F  +     PE    L  +   +A      +S+ G+TD   
Sbjct: 210 PVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRI- 268

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN---- 328
                  N +LS  RA +    L+  GV++D IS + G+            S        
Sbjct: 269 --GSDASNLKLSQRRADTVANYLVSKGVAQDAISAV-GYGEANPVTGMKCDSVKGRKALI 325

Query: 329 ---SANRRIDILVEDRQ 342
              + +RR++I V+  +
Sbjct: 326 ACLAEDRRVEISVKGSK 342


>gi|323700139|ref|ZP_08112051.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323460071|gb|EGB15936.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 241

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 68/170 (40%), Gaps = 12/170 (7%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L ++    + +++R++DL          +    +   +     + G+ +   D+    +
Sbjct: 75  ELMEKPWEVLDKQQRIKDLLFPDDILPDEISKAELNDNLDVLAKQDGVALVFTDR---IL 131

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    S        ++ ++  ++  +   I++ G+TDAS           LS DRA +  
Sbjct: 132 FAPGGSELSDTGKFLMARLVPMMTQTDAPINVAGYTDASDATQTP---LELSGDRALAVL 188

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN----SANRRIDILVEDRQ 342
             L+  GV + R   +S +      I ++         NRR++IL++  +
Sbjct: 189 AFLVDKGVHDSRF-SLSAYGDAFPVI-NELGRPVASPRNRRVEILLKTAR 236


>gi|312131594|ref|YP_003998934.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311908140|gb|ADQ18581.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 765

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 15/164 (9%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--QRNTPMFDKSSSIP 244
           +R   L+      S  +  + ++   +    +      +  I D  +     +D  S   
Sbjct: 602 ERNYELESEKSGYSKIVENIRSEVRKERKTPQKIHRSTMYKIGDVIRLENIYYDNESYKL 661

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +    L+KIGE+L  S E  I +  HTD       A+ N  LS  RA    + L++  
Sbjct: 662 GAQAKQSLRKIGELLQKSPELAIEVSSHTDTR---GSAQANMILSERRAEEVKKFLVQY- 717

Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           +S  RIS + G    +   A       +D  ++ NRR +I +  
Sbjct: 718 ISGHRISAV-GKGESQPVNACGDGVQCTDAEHARNRRTEIRILK 760


>gi|158523264|ref|YP_001531134.1| hypothetical protein Dole_3254 [Desulfococcus oleovorans Hxd3]
 gi|158512090|gb|ABW69057.1| conserved repeat domain [Desulfococcus oleovorans Hxd3]
          Length = 2118

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 230  DQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI----ARDN 284
            +    P+F    +         ++ + + LA    + I + GHTD  P R        DN
Sbjct: 909  EADQRPLFASFGTQLTENDKEQVRALRQSLAGRRIKRIIVTGHTDNQPIRARSRHIFADN 968

Query: 285  WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
              LSL RA S    L     +  +RI    G        ++      + NRR+ + V  
Sbjct: 969  DALSLGRAQSVATYLQTILNLPPERIEA-EGKGDREPVASNATEAGRAENRRVAVAVVS 1026


>gi|239905381|ref|YP_002952120.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
 gi|239795245|dbj|BAH74234.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
          Length = 234

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
              K  L+   +      K                      +    +  K   ++A  I 
Sbjct: 25  PQTKQELSLVFQDKNVPSKEKTQNLEKVPTFISPDAIKGSPEFKLSQENKLKYEIAILIK 84

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             ++         GV  +++   + ++     N+ MF   S+   P    ++  + ++L 
Sbjct: 85  ELITSDQNVKNNSGVSNDSSGVLMQVN-----NSVMFKPGSAEITPAAAKIMDGVAKILR 139

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319
                +++RGH D           W LS  RA +A + L  K+G+   R+  + G A  +
Sbjct: 140 DFKINLTVRGHADDDEGSGPYPSKWELSAARAAAAVRYLSEKAGIPSTRLRAV-GLADSQ 198

Query: 320 LKIASDPMN--SANRRIDIL 337
             +        S NRRI+  
Sbjct: 199 PLVPPTSAENKSRNRRIEFF 218



 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95
           YADF+T +MAFFL++W++ +    TK+ +   F          ++ +          + 
Sbjct: 2  AYADFVTAMMAFFLLLWLVVSLKPQTKQELSLVFQDKNVPSKEKTQNLEKVPTFISPDAI 61

Query: 96 N 96
           
Sbjct: 62 K 62


>gi|293611044|ref|ZP_06693343.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826696|gb|EFF85062.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 357

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +      + N RLSL RA
Sbjct: 238 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 294

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 295 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 346


>gi|87121179|ref|ZP_01077070.1| OmpA family protein [Marinomonas sp. MED121]
 gi|86163671|gb|EAQ64945.1| OmpA family protein [Marinomonas sp. MED121]
          Length = 201

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +F  +           ++K+ + L  +     +  GHTD +        N +LS  RA
Sbjct: 77  NILFVSNRFEVRRRYYSEVKKLADFLRKNPSSNVVIEGHTDNT---GHNHHNQQLSQQRA 133

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
            +   +L+K+  +++ R+  I G+   R   ++      + NRR+
Sbjct: 134 QAIANILIKTFSIAQSRVKAI-GYGETRPIASNLSAQGKAKNRRV 177


>gi|332532726|ref|ZP_08408600.1| outer membrane protein similar to peptidoglycan-associated
           (lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037753|gb|EGI74203.1| outer membrane protein similar to peptidoglycan-associated
           (lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 351

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  ++S    + +  ++K+   L    +   +  GHT A      A  N  LS  RA + 
Sbjct: 241 FPNNASAVSTQYLDDIEKVSAFLKEYPDTTVLLEGHTSAV---GKATYNKWLSKKRADAV 297

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            + L+  G++EDRI+ + G    RLK  ++     + NRR++  ++
Sbjct: 298 AKQLVADGIAEDRITTV-GLGEERLKNDANTKAANAENRRVEAHIK 342


>gi|171315482|ref|ZP_02904719.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171099482|gb|EDT44217.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 170

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +    + + G++D       A  +  LS  R
Sbjct: 63  GPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDE---GEAAYDLELSRRR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
           A      L+ +G+   RI  + G         +      + NRR  I+V  R
Sbjct: 120 AEVVAIELVDAGLDGKRI-AVVGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170


>gi|163755600|ref|ZP_02162719.1| elongation factor P [Kordia algicida OT-1]
 gi|161324513|gb|EDP95843.1| elongation factor P [Kordia algicida OT-1]
          Length = 281

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 16/149 (10%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFD-KSSSIPLPETIVVLQKIGEV 258
             S               T +   I  ID+   +  ++    S    P+    L      
Sbjct: 139 EFSEQTNQYDKGFAYKFQTMSEERIEAIDKGIASKVLYAGFGSKTFKPD--NTLNAYAIE 196

Query: 259 LAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           L +      T+ + I GHTD+      A  N      RA S     +  G++ +++  IS
Sbjct: 197 LKNYLAKHPTKHVEIIGHTDS---NGEAEANKWFGQQRAKSVMNYFVSQGIAAEKL-TIS 252

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVED 340
                     +        NRRI+I V +
Sbjct: 253 SKGETDPIAPNTTKEGQRLNRRIEINVTN 281


>gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
 gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
          Length = 415

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 7/150 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +++L       +  +S  +    V            +          +F  +SS      
Sbjct: 249 QEKLFSAVAISAPLISEPIIAEPVIVTSVPVIAPVFVAKKTYFVTNALFSVNSSQFKTN- 307

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             ++  I + L      I I G++D        + N  +S  RA      ++  G+S  R
Sbjct: 308 PDLIDLIMKSLQSKEGNIIITGYSDNL---GSVKYNQWISEKRAKVVANYIISEGISSSR 364

Query: 309 ISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           +  +          ++      + NRR+++
Sbjct: 365 LI-VKSEGEFYPVASNKTATGRAENRRVEL 393


>gi|189219501|ref|YP_001940142.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
 gi|189186359|gb|ACD83544.1| Outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Methylacidiphilum infernorum V4]
          Length = 528

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 11/111 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F   ++    +  V +Q++   L+ +        + G TD          N  LSL+RA 
Sbjct: 423 FRFGTAELDNKGRVDIQRLARFLSEAENSDKGVLLIGFTDNV---GSHTYNLGLSLERAQ 479

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           S  + L   G++   +  ++G        +++       NRR+++ +  ++
Sbjct: 480 SVAKALESRGIT---VVNVAGAGEEMPVASNESEEGREKNRRVEVWLCPKK 527


>gi|85375193|ref|YP_459255.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
 gi|84788276|gb|ABC64458.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
          Length = 293

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 72/294 (24%), Gaps = 11/294 (3%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
            ++ T                           D        +    D++       +  +
Sbjct: 2   SLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAEL----PDGPE 57

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           L+   + +K +  ++       S    SE  +                 D   +    + 
Sbjct: 58  LEGYISARKDERMQVTTIGGQQSVVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKV 117

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                        ++      + A  I +  +   A+              I   +I   
Sbjct: 118 ETKQWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATEALRGRVGDIDNYLIKDT 177

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               FD        E    L +       +   +  + G+TDA         N  LS  R
Sbjct: 178 TNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDAD---GSEELNQELSERR 234

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A      L +  G    R+   +G A       +      + NRR+ + +   +
Sbjct: 235 AARVTNYLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSK 288


>gi|28198797|ref|NP_779111.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
 gi|28056888|gb|AAO28760.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
          Length = 187

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD        E   VL    + L +     I+++G+TD          N  L  
Sbjct: 78  RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 134

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            R  S    L  +G S  +++ +S +   R           S NRR++I+   +
Sbjct: 135 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 187


>gi|71901734|ref|ZP_00683806.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|182681496|ref|YP_001829656.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
 gi|71728506|gb|EAO30665.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|182631606|gb|ACB92382.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
          Length = 179

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD        E   VL    + L +     I+++G+TD          N  L  
Sbjct: 70  RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 126

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            R  S    L  +G S  +++ +S +   R           S NRR++I+   +
Sbjct: 127 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 179


>gi|71275795|ref|ZP_00652079.1| OmpA/MotB [Xylella fastidiosa Dixon]
 gi|71900394|ref|ZP_00682527.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|170730225|ref|YP_001775658.1| outer membrane protein P6 [Xylella fastidiosa M12]
 gi|71163373|gb|EAO13091.1| OmpA/MotB [Xylella fastidiosa Dixon]
 gi|71729826|gb|EAO31924.1| OmpA/MotB [Xylella fastidiosa Ann-1]
 gi|167965018|gb|ACA12028.1| outer membrane protein P6 precursor [Xylella fastidiosa M12]
          Length = 178

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD        E   VL    + L +     I+++G+TD          N  L  
Sbjct: 69  RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            R  S    L  +G S  +++ +S +   R           S NRR++I+   +
Sbjct: 126 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 178


>gi|290955106|ref|YP_003486288.1| lipoprotein [Streptomyces scabiei 87.22]
 gi|260644632|emb|CBG67717.1| putative lipoprotein [Streptomyces scabiei 87.22]
          Length = 393

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +   P     L+ + + L      + +   GHT            + LS  RA +
Sbjct: 277 FTADDARLAPGADRYLRPVADSLERCGTDVVVTITGHTARV---GAGASGFALSGRRARA 333

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRIDILVEDRQG 343
             + L++ GVS   I  + G    R ++ + P           NRR++I V  ++G
Sbjct: 334 VSERLVRLGVSPALIGSVEGVGSTRPRVDNMPGGVFAERLARQNRRVEITVTPKEG 389


>gi|217970007|ref|YP_002355241.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|217507334|gb|ACK54345.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 200

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S    P     L  +   LA    V + + GHTD+         N RLS+ RA + 
Sbjct: 96  FASGSPAIRPTLGRALDALAPALAAEAGVAVRVVGHTDSQ---GSEMVNLRLSIARAEAV 152

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
              L + G++ DR+    G        ++        NRRI++++  
Sbjct: 153 VAWLRERGIALDRL-AADGRGEADPLTSNATEEGRVRNRRIELILSR 198


>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 368

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 17/121 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F+ + +   P     L  +   +          ++ GHTD          N  LS 
Sbjct: 246 SDVLFEFNKATLKPAASHALDTLFSQIVAANPKDGAATVVGHTDRI---GSDAYNQALSE 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA---------NRRIDILVE 339
            RA +    L+  G+  D++ ++ G         ++    S          +RR++I +E
Sbjct: 303 QRARTVADYLIAKGLFADKV-RVEGRGKSSPVTGNNCTTGSRPALIACLAPDRRVEIHLE 361

Query: 340 D 340
            
Sbjct: 362 G 362


>gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
 gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
 gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 366

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++        ++++   L  + E    I GH
Sbjct: 231 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKNVYYKDIERLANYLNKNPEFTVEIAGH 290

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +   +L++  G+S  R++  +G+   +  +A D     
Sbjct: 291 ASNV---GKPEYNMVLSDKRADAVANILVEKFGISRSRVTS-NGYGITQPLVAGDSKEAH 346

Query: 329 SANRRIDILVE 339
           +ANRRI+ +V 
Sbjct: 347 AANRRIEAIVT 357


>gi|326794456|ref|YP_004312276.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326545220|gb|ADZ90440.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 422

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 82/264 (31%), Gaps = 14/264 (5%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS----- 140
              P +  +   ID       +  +  + +    +K   +    ++    +S        
Sbjct: 154 NSKPKDADNDGVIDQKDQCPNSAPNASVDMSGCEEKATSKPTVVDMPKKVDSDGDGIYDS 213

Query: 141 -EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            + C N+   +           D ++          P       +  K    + D     
Sbjct: 214 VDQCPNTPANNEVNDLGCTLPNDNDQDGVLSNLDQCPTTPANTAVDDKGCAVVLDSDNDG 273

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               S    +      +     T   +   + +    F  +SS    E++ VL++    +
Sbjct: 274 VMDTSDSCPNTPAGFSVNSEGCTLYDLQTEEVQLEIRFANNSSEVKSESLPVLEEFATAI 333

Query: 260 AHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                + + ++GH+        A  N RLS  RA S   VL+K  GV    +    G+  
Sbjct: 334 NSYDLKNVEVQGHSS---LDGSASYNLRLSEARAQSVADVLVKQFGVDAS-VITAKGYGE 389

Query: 318 HRLKIASDPMNS--ANRRIDILVE 339
            +  I      +   NRR+  +++
Sbjct: 390 TQPVINEISNEANTVNRRVVAVIQ 413


>gi|307545157|ref|YP_003897636.1| peptidoglycan-associated lipoprotein [Halomonas elongata DSM 2581]
 gi|307217181|emb|CBV42451.1| K03640 peptidoglycan-associated lipoprotein [Halomonas elongata DSM
           2581]
          Length = 180

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           +  T  F   S    PE   VL      L ++     + +GHTD          N  L  
Sbjct: 74  EVRTIYFAFDSDAIRPEFQSVLNAHARFLRNNPNANVVLQGHTDER---GTREYNLALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            RA +  + L   GVS  ++ ++  +   R     +++   + NRR+  
Sbjct: 131 RRAGAVEEFLSVQGVSPSQV-EVVSYGEERPAARGSNEEAYAQNRRVVF 178


>gi|255321572|ref|ZP_05362730.1| putative chemotaxis protein MotB [Campylobacter showae RM3277]
 gi|255301428|gb|EET80687.1| putative chemotaxis protein MotB [Campylobacter showae RM3277]
          Length = 355

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 115/339 (33%), Gaps = 35/339 (10%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-------WIINATDDDTKKA-IEQYFNPF 72
              ++  +   ++ I YAD M  LM  F+++       ++++ +D    +  + +     
Sbjct: 2   KTRNENKSGDQTFWISYADLMAGLMFVFMLIIGAVVVKYVLSQSDLAKLQKDLSEREKQI 61

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +     +     +       + K +      I +   ++  G   +K +   L     
Sbjct: 62  ASSQSELVRKENVIKEIFSNLDRAKSENKELADINRLVNEMLEGVKKEKNELTNLTQTYE 121

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              N            R  + G+ L +  +    ++ +    +   +  +    K K ++
Sbjct: 122 INLNDANKTIADLQ-DRVLQLGQILAQKDEALNELSAKYGDEVSRYAALEEDFNKTKDKI 180

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D++  + S +   +   +   V  + +   + +       + +FD  S     E    L
Sbjct: 181 KDISS-LRSNVISNLRAKLGNKVSIDPSSGVVSL-----PESILFDTGSYELRDEAKARL 234

Query: 253 QK----------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           ++            E +A   + I I GHT++         N  LS  RAYS    +   
Sbjct: 235 KEILQTYFEAILNNEEIAKHIDRIVIEGHTNSI---GSYMYNLDLSQKRAYSVLDFIYSW 291

Query: 303 GVSE--DRISKISGFAHHRLKIAS---DPMNSANRRIDI 336
              +  +     SG +   L + +   DP  S   RI+I
Sbjct: 292 NKDKRLEHYLIASGRSFSDLVMKNGKEDPDASK--RIEI 328


>gi|15639612|ref|NP_219062.1| hypothetical protein TP0624 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025850|ref|YP_001933622.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322920|gb|AAC65597.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018425|gb|ACD71043.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059994|gb|ADD72729.1| OmpA family protein [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 476

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 12/144 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +   + D    GV   +    + I++ D R    F  +S   L      +  I   L  
Sbjct: 341 DVKRFLTDERSPGVGVRSGINTLKITVYDVR----FVANSPEILASEKDRVDVIATALKK 396

Query: 262 S--TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                   I GHT              LS+ RA    Q L + G+   RI+   G    +
Sbjct: 397 MGPYTRFLIEGHTADLHRPQEEA---ALSVARAQRMAQELSRRGIEMTRITTA-GHGATK 452

Query: 320 LKIASDPMN--SANRRIDILVEDR 341
               SD     + NRR++I +   
Sbjct: 453 PIAPSDTHANKAKNRRVEITILRD 476


>gi|315078400|gb|EFT50431.1| OmpA family protein [Propionibacterium acnes HL053PA2]
          Length = 368

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  + L   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASVAKGLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|310778685|ref|YP_003967018.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748008|gb|ADO82670.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
          Length = 342

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F  +S       +  + +I +VL      ++I G+TD++     A+ N  LS  RA + 
Sbjct: 237 LFSVNSYEVTGAGLAEIDEISQVLEGHKGTLTIEGNTDST---GAAKYNMMLSEKRAEAV 293

Query: 296 YQVLMKSGVSEDRISKIS-GFAHHRLKIASDPMNSA--NRRIDIL 337
             V     +  + I  +S GF      + +    +   NRR+++ 
Sbjct: 294 ANVFKAR-LEGEEIEIVSKGFGEENPLVPNTTPEAKAQNRRVEVF 337


>gi|114047938|ref|YP_738488.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113889380|gb|ABI43431.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 290

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +D+  +     +   L +I E L++  +V  + +  +TD+         N ++S  RA S
Sbjct: 184 YDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
                + SG+ +DRI  + G    R   ++D     + NRR+ I +   
Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRISKP 288


>gi|212636483|ref|YP_002313008.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212557967|gb|ACJ30421.1| OmpA [Shewanella piezotolerans WP3]
          Length = 364

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+I    +   ++ + E ++      + I GH   +     A  N  LS  RA + 
Sbjct: 253 FATNSAIVQESSYSDIKDLAEYMSKHPNSEVVIAGHASNT---GAADYNMALSERRAIAV 309

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
             VL+ + G++  R+S   G+   +  I      +  ANRRI+
Sbjct: 310 ADVLINEYGIAPARVSS-KGYGITQPLIEGSSKEANQANRRIE 351


>gi|77359154|ref|YP_338729.1| hypothetical protein PSHAa0183 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874065|emb|CAI85286.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 354

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 8/174 (4%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            + +    P+       +     +      I           +   V            +
Sbjct: 177 GQSSVAEEPVQPAPEPVIVEVAPVDSDNDNIPDADDQCPNTPMTDAVDGTGCTLYEDKEV 236

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
                   F  ++S    + +  + K+ E L    +   +  GHT +      A  N  L
Sbjct: 237 TVSL-LVTFPNNTSAVSTQYLNDIDKVAEFLKEYPDTTVLLEGHTSSV---GKASYNKWL 292

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           S  RA +  + L+  GV+EDRI+ + G    RLK  ++   +   NRR++  ++
Sbjct: 293 SKKRADAVAKKLVADGVAEDRITTV-GLGEERLKNEANTKAAHEENRRVEAHIK 345


>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
 gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
          Length = 366

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N  LS
Sbjct: 238 KSDVLFNFNKATLKPEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQALS 294

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  +++S   G    +        +    +A       +RR++I 
Sbjct: 295 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 353

Query: 338 VED 340
           V+ 
Sbjct: 354 VKG 356


>gi|127512084|ref|YP_001093281.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126637379|gb|ABO23022.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 234

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 10/179 (5%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             ++          + +   +       +L                 +    E  +  I 
Sbjct: 63  PHSRPNAVVDAKGCEIRRGEIACIAPEGELLSFCEPAAQKAQYGQARQNKQDEQVKRSI- 121

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
                      F  +S+    +    L K+ + L+ S   +++ GHTD          N 
Sbjct: 122 --GESNVVRVYFAFASAEVSIDQWPQLAKVRDFLSASDARLTLVGHTDNI---GSEAVNL 176

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            LS  RA    Q+ +   GV  +R+S ++     +    +      + NRR++ +VE R
Sbjct: 177 SLSRQRAERVKQIFVQDYGVKAERLSIVA-KGASQPVTDNFGPGERALNRRVEFIVEAR 234


>gi|254462893|ref|ZP_05076309.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
 gi|206679482|gb|EDZ43969.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 219

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+         L++    +    E    + GH DA         N  L L RAY+ 
Sbjct: 81  FAFGSAQLDAGAHDTLREQAAWIRQFPEVRFRVYGHADAV---GGNASNKSLGLQRAYAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L  +G+ + R+  +S F   +  I S+     NRR
Sbjct: 138 VNFLAANGIGKSRLEAVSSFGEEQPLIVSEGRERRNRR 175


>gi|88810551|ref|ZP_01125808.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
 gi|88792181|gb|EAR23291.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
          Length = 147

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S++   E + +L+  GE L+      ++I GHTD          N  L   RA + 
Sbjct: 45  FDFDSNVVKSEYMPILKAHGEYLSTHPENQVTIEGHTDER---GSREYNLALGERRAKAV 101

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            ++L  +G ++++IS +S +   +         +   NRR  I+
Sbjct: 102 QRILELNGAAKEQISTVS-YGEEKPLDPGHTEAALTKNRRALIV 144


>gi|258627656|ref|ZP_05722431.1| Outer membrane protein A [Vibrio mimicus VM603]
 gi|258580055|gb|EEW05029.1| Outer membrane protein A [Vibrio mimicus VM603]
          Length = 194

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 12/160 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++ +   +  L+ +       L   +  N +   +       I +     +NT  FD 
Sbjct: 37  APQLNSAGVQGPLKQVRTSSYEALRQFLLSNGIDHEIMPGDYPMIKL-----KNTIKFDT 91

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            S+    ++   L ++ + LA  + +  +  GHTD +      + N  LS  RA S    
Sbjct: 92  GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GTQKFNDSLSEKRASSVKTA 148

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           L++  V+++ I    G+  H     +      + NRR+++
Sbjct: 149 LVQRQVAQNAIYT-RGYGEHVPACTNKTKNGRACNRRVEV 187


>gi|37704636|gb|AAR01590.1| OprF [Pseudomonas sp. MFY80]
 gi|37704642|gb|AAR01593.1| OprF [Pseudomonas sp. MFY106]
 gi|37704646|gb|AAR01595.1| OprF [Pseudomonas sp. MFY116]
 gi|37704648|gb|AAR01596.1| OprF [Pseudomonas sp. MFY122]
          Length = 316

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316


>gi|313675340|ref|YP_004053336.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312942038|gb|ADR21228.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 745

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S    +    L KI EV+  + ++ I +  HTDA         N RLS 
Sbjct: 631 DIQPIYFDLGKSEIRKDAAKELDKIVEVMKANPKMVIELGSHTDAR---GSDAFNLRLSD 687

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            RA ++   ++  G+ EDRI    G+   +L          S+  +  NRR +  V  
Sbjct: 688 KRAKASAAYIVSQGIDEDRI-SGKGYGETQLINDCGNGVNCSEEEHQLNRRTEFKVLK 744


>gi|85713385|ref|ZP_01044392.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
 gi|85692791|gb|EAQ30782.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
          Length = 180

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 7/148 (4%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q+  +   S     V                  +  + + +   F    S    E   +L
Sbjct: 36  QETGQTTESGSQSGVQVGAADRAKTPEEVREEQMEALRKEHIIYFAFDRSSVQSEYAELL 95

Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
               + L  +  V  +  GH D          N  L   RA +    L+  GV + +IS 
Sbjct: 96  AAHADYLVKNPNVTIVIEGHADER---GTPEYNIALGERRAKAVEDYLVNLGVQDSQIST 152

Query: 312 ISGFAHHRLK--IASDPMNSANRRIDIL 337
           +S +   +     +++   + NRR  ++
Sbjct: 153 VS-YGEEKPLVNASNERAYAKNRRAVLV 179


>gi|322834544|ref|YP_004214571.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
 gi|321169745|gb|ADW75444.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
          Length = 165

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
               +F  + +    E+   ++K+   L H     +++ GHTD       A  N  LSL 
Sbjct: 58  DAKVLFGNNQATLSTESKQSVEKLASELLHVGLNKVNLDGHTDNY---GDAGYNNDLSLR 114

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           RA +       +G+    I    G    +   ++      + NRR+ +++
Sbjct: 115 RANTVAAAFADAGMPRANIHT-RGLGQSQPVASNKTQAGRAQNRRVSVII 163


>gi|170693360|ref|ZP_02884520.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170141890|gb|EDT10058.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 230

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS L      + +    T  G+ I+I  +    +F+   +  LPE+  VL +I  VL 
Sbjct: 91  QLLSLLAPLQDNRQITISHTPQGVEIAINAK---VLFNSGDARLLPESFAVLDRIAAVLR 147

Query: 261 HS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + GHTD+ P        NW LS  RA +  +     G+   R++ I G A +
Sbjct: 148 DRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIEAHRMAAI-GRADN 206

Query: 319 RL-KIASD 325
               I +D
Sbjct: 207 FPLIIGND 214



 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
               D+      W I YAD +T LM  FL ++++    +   +       P  
Sbjct: 17 HDDGQDSGEQSDRWLISYADLITTLMVLFLALYVLQLAKNSELQIQTLQHRPVK 70


>gi|148553776|ref|YP_001261358.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148498966|gb|ABQ67220.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 373

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S    E   +L       A + +  + + GH D        + N  LS  
Sbjct: 264 PFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADK---SGSDQYNVGLSQR 320

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           RA +    L   GV +  I+    F   R  + +        NRR++I 
Sbjct: 321 RADAVKAYLAGKGVPDSAITT-EAFGESRPLVDTADGVREPQNRRVEIT 368


>gi|269139251|ref|YP_003295952.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
 gi|267984912|gb|ACY84741.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
          Length = 162

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F  + +   PE+   + ++G  L+        + G+TD        + N +LSL R
Sbjct: 55  EKVLFGNNQATLRPESQAHVAELGHALSQVAILHARLDGYTDNY---GTDQYNQQLSLKR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      +   G+    ++   G         +      + NRR+ I+++  
Sbjct: 112 ADKVADAMASGGMPRANLTT-RGMGKSNPIADNATRQGRAENRRVAIVIQAP 162


>gi|37679816|ref|NP_934425.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|37198561|dbj|BAC94396.1| outer membrane protein [Vibrio vulnificus YJ016]
          Length = 348

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           ++KRL  L +++   LS        +       +  I+  + D  N    F  +S+   P
Sbjct: 183 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 241

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L K   +L   T   +++ GH DA+        N +L++DRA    + L   G+ 
Sbjct: 242 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 298

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            +RI+  S           +       NRR+ I ++  
Sbjct: 299 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 335


>gi|313672972|ref|YP_004051083.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939728|gb|ADR18920.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
          Length = 201

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S     E+I + ++I   + +     + I GHTD+         N+ L L RA S 
Sbjct: 99  FETGSDQLTEESINMTKEIINEIKNRENPELEIIGHTDSV---GEKEANYLLGLKRAESV 155

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
             +L   GV      ++S        I    +     NRR++++V+
Sbjct: 156 KNILTSQGVDTGMEIELSSLGEDNPLIPMPDETPEPKNRRVEVVVK 201


>gi|254481114|ref|ZP_05094360.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
 gi|214038909|gb|EEB79570.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
          Length = 209

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 18/191 (9%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
                +               +     ++    L+D    +   +  L     +  +  +
Sbjct: 26  DPARPDDPEAHLAAQKALTDIRRFHGDVRELPGLKDSGLVLQENIEDL--QQALATLNAK 83

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
                I IS+       +FD       PE    L+ +  VL  +    + I GHTDA   
Sbjct: 84  VLDQEIQISLSADL---LFDFDQYQVKPEADAELRTLTTVLLETGSAQVRIVGHTDAL-- 138

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASD--------PMN 328
                 N RLS  RA S  + L+  G +  D   +  G         +            
Sbjct: 139 -GSETYNQRLSEQRAESIKRWLLGPGHIGSDVTIETMGKGESEPVAPNSNIDGSDNVDGR 197

Query: 329 SANRRIDILVE 339
           + NRR++++++
Sbjct: 198 ALNRRVELVIQ 208


>gi|291276590|ref|YP_003516362.1| putative flagellar motor protein [Helicobacter mustelae 12198]
 gi|290963784|emb|CBG39619.1| putative flagellar motor protein [Helicobacter mustelae 12198]
          Length = 258

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 11/208 (5%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             S   K  +     +   +  +T   ++I         P          + ++ QD   
Sbjct: 36  AISAQNKAKVEALKTEFIKIFDATPKPETIQPVTRIPPNPGDVTDQEDGDKAQQSQDSNA 95

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIG 256
             +      +   I +G + E    GI + +       +FD  S+     E    L+ + 
Sbjct: 96  VKTVENIVQLEQIIQEGGVLEQIEHGITLQLPSDL---LFDNGSAELANDEMKDYLRNMA 152

Query: 257 EVLAHSTEVISIR--GHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            V+      +SI   G+TD    P  +  ++++ L+  RA +   VL++ GV++ ++   
Sbjct: 153 NVIKKFPPQVSINVKGYTDNAPLPPNSPYKNHYLLAAARAMAVMNVLIQQGVNQKQL-SF 211

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338
           + +  +     ++     + N R++I +
Sbjct: 212 TSYGKNSPIAPNNTPANRAKNNRVEIYL 239



 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 49/159 (30%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K A          W + YADF+++L+A F+ ++ I+A +    +A++  F          
Sbjct: 3   KKAKKQECPAGEKWAVPYADFLSLLLALFIALYAISAQNKAKVEALKTEFIKIFDATPKP 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  + PP        +       +++S  +K      + +    E  +        
Sbjct: 63  ETIQPVTRIPPNPGDVTDQEDGDKAQQSQDSNAVKTVENIVQLEQIIQEGGVLEQIEHGI 122

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           +    + L  D+   +                    PP 
Sbjct: 123 TLQLPSDLLFDNGSAELANDEMKDYLRNMANVIKKFPPQ 161


>gi|15838494|ref|NP_299182.1| outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
 gi|9106989|gb|AAF84702.1|AE004009_9 outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
          Length = 186

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD        E   VL    + L +     I+++G+TD          N  L  
Sbjct: 77  RQRVVYFDFDKDDVKKEFQTVLGCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 133

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            R  S    L  +G S  +++ +S +   R           S NRR++I+   +
Sbjct: 134 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 186


>gi|307579950|gb|ADN63919.1| outer membrane protein P6 precursor [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 149

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD        E   VL    + L +     I+++G+TD          N  L  
Sbjct: 40  RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 96

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            R  S    L  +G S  +++ +S +   R           S NRR++I+   +
Sbjct: 97  RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 149


>gi|269122521|ref|YP_003310698.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
 gi|268616399|gb|ACZ10767.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
          Length = 358

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 14/139 (10%)

Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAH---STE 264
           K V  +      +I +  +    M     F     +P       L+ I  +L        
Sbjct: 211 KYVEKQVPVNTTVIDLNCRAAQKMCIINGFKVDGKVPNEAEQRDLRTIANILNAAVVDGG 270

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIA 323
            I++ GHTD++     A  N +LS++RA +  ++L + G+    +   I+G    +    
Sbjct: 271 TINVVGHTDST---GSAAYNQKLSVERAQNVARLLREYGLKNTVKFGTITGKGLTQPMAT 327

Query: 324 SDPMNSA--NRRIDILVED 340
           ++ +     NRR+++  + 
Sbjct: 328 NNTVEGRYQNRRVELFFDR 346


>gi|189346279|ref|YP_001942808.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
 gi|189340426|gb|ACD89829.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
          Length = 153

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S    E +  LQK  + +  +    + + GH D          N  L   R
Sbjct: 46  GDIFFDYDKSELRAEAVEQLQKNFDWMKQNPAGTLIVEGHCDER---GTNEYNMALGERR 102

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   ++  G    R+  +S +   R       +   + NRR
Sbjct: 103 ANAAKDYMVNVGADPARMQTVS-YGEERPFALGHDEASWAQNRR 145


>gi|262394300|ref|YP_003286154.1| outer membrane protein [Vibrio sp. Ex25]
 gi|262337894|gb|ACY51689.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 272

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           +++RL  L +++   LS          +    +   ++  I    N    F   S+   P
Sbjct: 102 QRRRLNQLEQQLDYVLSQ-TTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINP 160

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L +   +L       + + GH D          N +L+  RA    + L   G++
Sbjct: 161 KYMGHLAEAAYILRDHPNLTLVVTGHAD---VTGAPDYNQKLAQARAEQVKRYLTVFGIT 217

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +R++              +       NRR+ I V    
Sbjct: 218 SERVTT-KSVGDSLPLYEGETPAVRLTNRRVSIEVISPN 255


>gi|107100572|ref|ZP_01364490.1| hypothetical protein PaerPA_01001597 [Pseudomonas aeruginosa PACS2]
 gi|313106086|ref|ZP_07792343.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
 gi|310878845|gb|EFQ37439.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
          Length = 158

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   +LA   + + + GHTD          N +LS  R
Sbjct: 51  SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 107

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    +    +        NRR+ I+V
Sbjct: 108 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 155


>gi|86748026|ref|YP_484522.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86571054|gb|ABD05611.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 208

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 17/201 (8%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 L   S       ++ ++     +++       S     A      L  + +   
Sbjct: 11  ALAAVVLVGGSGISMTAAEAGEVSSQQIRDQLKTSKTRSLSGTRAAMSPDDLATIKRVSR 70

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +          +  +  +     + I+         FD +S+   P     L+ +G+ L 
Sbjct: 71  TRSLSAGDREQIAAIAAKRPTIDLEIN---------FDYNSATLSPRAEPQLKSLGDALT 121

Query: 261 HS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
            S     ++ + GHTDA   +     N  LS  RA +  + L++   +  D +  + G+ 
Sbjct: 122 SSDLKNSIVMLAGHTDA---KGGDDYNQSLSERRAEAVKRYLIERYRIQPDNLVAV-GYG 177

Query: 317 HHRLKIASDPMNSANRRIDIL 337
             +LK +++P+ + NRR+ I+
Sbjct: 178 EKQLKSSAEPLAAENRRVQIV 198


>gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales
           bacterium TW-7]
 gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales
           bacterium TW-7]
          Length = 351

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +      +  + ++   L    +   +  GHT A      A  N  LS  RA S 
Sbjct: 241 FPNDKAAVSQRYLDDIDQVASFLKDYPDTTVLLEGHTSAV---GKATYNKMLSKKRADSV 297

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
            + L+  G++ DRI+ + G    RLK  ++     + NRR++  ++
Sbjct: 298 AKQLIADGIASDRITTV-GLGEERLKNEANTAAAHAENRRVEAHIK 342


>gi|209886401|ref|YP_002290258.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
 gi|209874597|gb|ACI94393.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
          Length = 160

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +    + I  L+K  + L        +I GH D          N  L   R
Sbjct: 52  DRVFFESDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADER---GTREYNIALGAKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G++  R+  IS +   R     +D    S NRR
Sbjct: 109 AQSVRNFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 151


>gi|116329523|ref|YP_799243.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116329838|ref|YP_799556.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116122267|gb|ABJ80310.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116123527|gb|ABJ74798.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 684

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 16/285 (5%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE--RSSQNKIDLSIDEHITKNSVD 112
                                 +  S   F  Q      R +  K       ++      
Sbjct: 406 GDLTKGKLSNFATTLQTGRVYKVEISSPGFHPQEDILDLRGNIGKNRKIYRTYVLLPIQI 465

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            +  +   K +    +           ++     +  D++       +   E  +  +++
Sbjct: 466 GEGKAEETKTEPADNQKPSSAAMKVIVADASTKQVIPDAKVTLFTPTNRKGESLVTDKKS 525

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
           + +  L +                K IS +++ +  +    G++    R    ++ I   
Sbjct: 526 FLINRLPESDFELFATAP------KYISESINIIQKNIPKNGIVTIYLRAENDVNPIYNL 579

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               F+ + +    E   +L  + + L  ++++ I I GHTD          N RLS  R
Sbjct: 580 R-VYFEFNKTKITNENKKLLDPLVDYLLKNASDKIEIGGHTDNV---ASKEYNTRLSAKR 635

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
           A + Y+  +  G+SE R+  I  + + +    ++     + NRR+
Sbjct: 636 ARNVYEYFLSKGISEKRMK-IRAYWYSQPDADNETEIGRAKNRRV 679


>gi|83943938|ref|ZP_00956395.1| OmpA family protein [Sulfitobacter sp. EE-36]
 gi|83845185|gb|EAP83065.1| OmpA family protein [Sulfitobacter sp. EE-36]
          Length = 234

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 4/103 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +T  F  +S+        VL++    +    E    + GHTDA         N  L L 
Sbjct: 85  ESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAV---GSNSYNKALGLR 141

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           RA S    L   G+S  R+  +  F   +  I +     ANRR
Sbjct: 142 RAQSVVAFLSTQGISRSRLEAVVSFGETQPLIVTQGRERANRR 184


>gi|298529977|ref|ZP_07017379.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509351|gb|EFI33255.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 200

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     +    LQKI E +    E  + I GHTD       A  N  L   RA +A
Sbjct: 98  FAFDSYELDADARSALQKISEHMKRFDELRLVIEGHTDER---GTAEYNLALGERRARAA 154

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           Y+ L+  GVS DR+  IS +      +  +++   + NRR +  V D
Sbjct: 155 YEFLVLLGVSSDRLQIIS-YGEENPLVDESNESAWAQNRRAEFKVLD 200


>gi|91216576|ref|ZP_01253542.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
 gi|91185370|gb|EAS71747.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
          Length = 759

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P+  V LQKI   +       I +R HTD+         N  LS  RA + 
Sbjct: 547 FDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSR---AGDEYNQILSNKRAKAT 603

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
              +++  G+S +RI    G+   +L          S+  ++ NRR + ++    
Sbjct: 604 INYIIEKSGISSERI-SGRGYGESQLVNKCSNGIDCSESEHALNRRAEFIILKPN 657


>gi|189346280|ref|YP_001942809.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
 gi|189340427|gb|ACD89830.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
          Length = 169

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD  SSI   E    L +    L  +     +  GH D       +  N  L   R
Sbjct: 64  GDVFFDYDSSILATEAQNRLTQNAAWLKSNAGKSVVIEGHCDDR---GTSEYNIALGERR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           A +A + + + GVS  R+  ++ +   R      ++   + NRR   +V+
Sbjct: 121 AVTAKEFIARLGVSASRLETVT-YGEERPFDKGQNEEAWAKNRRAHFVVK 169


>gi|114777571|ref|ZP_01452552.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
 gi|114552042|gb|EAU54559.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
          Length = 258

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 74/246 (30%), Gaps = 18/246 (7%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
               D+           G+    +   ++      L++       K      S  G    
Sbjct: 1   MAKRDKKPAPLPFPSDPGAALFLELMMQMLAFFILLTSYAVIVDDKRLAAIGSLAGTFSP 60

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
                     K        +        +  K L D+AK++    +  +           
Sbjct: 61  MPRGANLDEGKGPALPTRSIVDGSTAPKRTAKELTDIAKELGQGDAIEI---------MP 111

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF 277
             ++ + I          F        P+   ++ K+  +        I I GHTDA+P 
Sbjct: 112 LDKSSLRIRF---PEHIAFAAGHVDLSPKARTLIDKLAIIFQKPEVTEIQIEGHTDATPT 168

Query: 278 RNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +N     NW LS  RA + +  L + GV   R+    G           P  S  RR+DI
Sbjct: 169 KNSDYPSNWELSAARAMAVFHELAEQGVPRGRMIAA-GMGDQHPI-KGHPELS--RRVDI 224

Query: 337 LVEDRQ 342
            ++ R 
Sbjct: 225 TLKFRP 230


>gi|260221771|emb|CBA30668.1| hypothetical protein Csp_C24700 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 214

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 10/172 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
            F+  L    ++ M     L+   KK        +A      +  ++ R  +    I   
Sbjct: 31  AFVLILVGVLVVQMDLVANLESEVKKRQQEEQRRMALEKALAIPLQSGRVTLNNGRIGIS 90

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNW 285
            + +F  +S     +   +L+ +   L        E++ + G TD            DN 
Sbjct: 91  GSVLFAVNSDQLRADGRQLLKSLVPPLQVYLGERDEMLMVSGFTDNVAVSGANRHFADNL 150

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335
            LS  R+ +  + L++ G+   R+   + F   +   +  ++   + NRR++
Sbjct: 151 ELSAQRSLTVTRALIEEGMPASRVFAAA-FGAQQPVASNQNESGRALNRRVE 201


>gi|37704658|gb|AAR01601.1| OprF [Pseudomonas sp. MFY152]
 gi|37704674|gb|AAR01609.1| OprF [Pseudomonas sp. MFY314]
          Length = 316

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316


>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
 gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
 gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
 gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
 gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 355

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 227 KSDVLFTFNKSTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G         +  D +            +RR++I 
Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGKSNPVTGNTCDSVKGRKALIDCLAPDRRVEIQ 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|256830501|ref|YP_003159229.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579677|gb|ACU90813.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 260

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   + ++  K + FE+ R    +SI       +F   S+        +L ++  V+  S
Sbjct: 74  VRDHLWEDPDKDLRFESNRFMQRLSIGAD---ALFAPGSADLTAGGRSLLDRLRPVVMES 130

Query: 263 TEVISIRGHTDASPFRNIARD----------NWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + + GHT                     +W LSL R  + Y+  +++GV  +++ ++
Sbjct: 131 SHPLGLSGHTSEGMDEFGPDYLAKPWIKVDFSWELSLARVMAVYKYFIETGVEPEKL-RL 189

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
             F   R ++ ++       NRR++I ++ R G
Sbjct: 190 EAFGRFRPRLTTEAPGERQTNRRVEITLDRRVG 222



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 16/101 (15%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
            I ++D +T++M FF+V+  + +  D  K+ +                 I          
Sbjct: 1   MITFSDLVTLMMTFFIVLVSMASLTDIYKRKVA----------------IGSVSGTFGTG 44

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           + +  DL+  +  T+          +       L  +    
Sbjct: 45  APSMNDLTTVDTRTQVDPGPINVFKDLSPVRDHLWEDPDKD 85


>gi|148258086|ref|YP_001242671.1| outer membrane lipoprotein omp16 [Bradyrhizobium sp. BTAi1]
 gi|146410259|gb|ABQ38765.1| Outer membrane lipoprotein omp16 precursor
           (peptidoglycan-associated lipoprotein) [Bradyrhizobium
           sp. BTAi1]
          Length = 149

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K  + L        +I GH D          N  L   R
Sbjct: 41  DRVFFESDQTDLTPQAIATLEKQAQWLQTYPRYSFTIEGHADER---GTREYNIALGARR 97

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L+  G+ + R+  IS +   R     +D    S NRR
Sbjct: 98  AQSVRNFLVSRGIDQGRMRTIS-YGKERPVAVCNDISCWSQNRR 140


>gi|116049050|ref|YP_792148.1| hypothetical protein PA14_49900 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115584271|gb|ABJ10286.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 168

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   +LA   + + + GHTD          N +LS  R
Sbjct: 61  SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    +    +        NRR+ I+V
Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165


>gi|49081488|gb|AAT50144.1| PA1119 [synthetic construct]
          Length = 169

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   L       + + GHTD          N +LS  R
Sbjct: 61  SKVLFGNNLDRLNPDSRNTLTKIARALLAVDIGKVRLEGHTDNY---GDEGYNQKLSERR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    +    +        NRR+ I+V
Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165


>gi|325067558|ref|ZP_08126231.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 394

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290
               F   S     +   VL  + E +        ++I GHTD          N  LS  
Sbjct: 109 GDVTFATDSDQLSDQADGVLANVVEQIKKFPSGGDLTITGHTDDV---ADDAHNQDLSER 165

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA +  + L K          +SG      ++ +D      ANRR++I +   +
Sbjct: 166 RAKAVSERLKKLTDLSKWKESVSGKGESSPRVPNDSDEHRQANRRVEITLMPSK 219


>gi|37704638|gb|AAR01591.1| OprF [Pseudomonas sp. MFY81]
 gi|37704640|gb|AAR01592.1| OprF [Pseudomonas sp. MFY82]
          Length = 316

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316


>gi|298208372|ref|YP_003716551.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
 gi|83848293|gb|EAP86163.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
          Length = 332

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 7/115 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           S+ ++     F + +  P         ++   L        SI GHTD   F     DN 
Sbjct: 221 SVTNKTLYSSFAQQNFKPDATLKSYALELKSYLQKHPNKRVSIVGHTD---FVGEEEDNL 277

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            +   RA    + L+  G+  ++++  S       K  +      + NRRI+I V
Sbjct: 278 WIGEQRAKLVMKYLISIGIDANKMTA-SSKGESDPKFPNTTDANRAKNRRIEIKV 331


>gi|327399144|ref|YP_004340013.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
 gi|327181773|gb|AEA33954.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
          Length = 188

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 15/116 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           F  +S    P     + +  +         +L H T  + I G+ D          N  L
Sbjct: 77  FKFNSFEIEPINQYGINEKPKAILDRIAAFMLKHPTLKVRIEGNCDER---GTVEYNLAL 133

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
              RA +A + L+  GV+ DRI  IS +   R      ++   + NRR   ++ +R
Sbjct: 134 GQKRALAAKKYLVAKGVNPDRIDIIS-YGESRPLDPAHNEYAWAKNRRDHFVLLER 188


>gi|325953665|ref|YP_004237325.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323436283|gb|ADX66747.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 218

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD + S+    +++ +  I ++L       + I G+TD +     A  N ++S +R
Sbjct: 110 DRVYFDINKSVITDNSLIQIDNIAKILKAYPTATLKIGGYTDNT---GDAAINKKISTNR 166

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPM--NSANRRIDILVEDR 341
           A    + L+  G+S +RIS   G+        A+D     + NRR+DI +  +
Sbjct: 167 ADEVAKALVNKGISANRIST-EGYGDQHFLCEANDTDLCRAQNRRVDIRITKK 218


>gi|209695366|ref|YP_002263295.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
           salmonicida LFI1238]
 gi|208009318|emb|CAQ79584.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
           salmonicida LFI1238]
          Length = 185

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  T  F   +S    E   +L      L+ + E  +++ GH D          N  L  
Sbjct: 79  QVQTVYFAFDNSTISSEYEDMLAAHAAFLSKAPEVKVTVEGHADER---GTPEYNIALGE 135

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 136 RRANAVAKYLQALGVSADQISIVS-YGEEKPLVLGQTAEDYAKNRRAVLV 184


>gi|154252570|ref|YP_001413394.1| peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156520|gb|ABS63737.1| Peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
           DS-1]
          Length = 166

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   S    E    LQ+    +        ++ GH D          N  L   R
Sbjct: 56  DRVFFDTDQSSLSDEARATLQRQAAWMQLYPNLTFTVEGHADER---GTREYNLALGGRR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRR-IDIL 337
           A SA   L+  GV   R++ +S +   R     +++   + NRR + ++
Sbjct: 113 ANSAKDYLVSLGVDGGRLNTVS-YGKERPVCLDSNENCWAQNRRAVTVV 160


>gi|330814393|ref|YP_004358632.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487488|gb|AEA81893.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 155

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   F  +S+         L K    +  S   + I GH D          N  L   RA
Sbjct: 50  DRVFFATNSTGLTSAAKTTLTKQAGYIKSSKIYVVIEGHADER---GTREYNLALGERRA 106

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            +A   LM  GV++  I  +  +   R           S NRR  + V+ +
Sbjct: 107 NAARDYLMAKGVAKSSIK-VISYGKERPANTDSSKLAWSQNRR-SVTVKAK 155


>gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola]
          Length = 324

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD        + N +LS
Sbjct: 196 KSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRID---SEQYNQKLS 252

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN---------RRIDIL 337
             RA S    L+  G+   +I    G       I    D +   N         RR++I 
Sbjct: 253 EKRAQSVVDHLVSKGIPASKIYA-RGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIE 311

Query: 338 VED 340
           V+ 
Sbjct: 312 VKG 314


>gi|262281137|ref|ZP_06058919.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
 gi|262257368|gb|EEY76104.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
          Length = 352

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +      + N RLSL RA
Sbjct: 233 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 289

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 341


>gi|242281267|ref|YP_002993396.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242124161|gb|ACS81857.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 276

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 17/154 (11%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +  L+ +   + + FE+ R   ++SI       +F   S+    E   +L  +  VL 
Sbjct: 87  EPIKPLLWEFAEEDLRFESNRFVQILSIGAD---VLFTPDSTSLSIEGTRILDTVLPVLK 143

Query: 261 HSTEVISIRGHTDASPFRNIARD-----------NWRLSLDRAYSAYQVLMKSGVSEDRI 309
                + + GHT                      +W++SL+R+ + Y  L+++G+  + +
Sbjct: 144 RVKHPVLVAGHTSILRDELGEDYRVEDRDLTPDISWKISLNRSLAVYNYLIRNGMDSE-M 202

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            K+  F   R +  +        NRR+D++++ R
Sbjct: 203 LKMEAFGKFRPRHPNSTPEGRKMNRRVDLVLDTR 236



 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +      P     W I ++D MT+++ FF+++  ++  D+  K  +              
Sbjct: 3   RKKKPPEPEGQPLWLITFSDLMTLMLTFFVLLVSMSVVDERRKLVVLGSIIGTFGFGSKG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITK 108
              + D Q+            +  E I  
Sbjct: 63  YDVLSDTQSRKTVQVGPMELQADLEPIKP 91


>gi|171060730|ref|YP_001793079.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170778175|gb|ACB36314.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 200

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+ +S+   P +   L  +   L  +       ++ GH D       A  N +LS  RA 
Sbjct: 96  FETNSARLTPSSRQQLDTVAAALKSNQLQAYGFNLEGHADPR---GQASTNRQLSQMRAE 152

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           S    L+   G+  DR++ I G          D     NRR+ I+
Sbjct: 153 SVRDYLVATHGIPVDRLAPI-GKGDTEPLNTRDVAAPENRRVTIV 196


>gi|83950087|ref|ZP_00958820.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
 gi|83837986|gb|EAP77282.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
          Length = 186

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F              L    + L  ++     I GH D          N  L   R
Sbjct: 76  DRVLFPVDQHTLTSTAQQTLNGQAQWLLRNTDYDALIEGHADEQ---GTREYNLALGARR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A S  + L+  GV   R+  +  +   R     + +   + NRR   ++    G
Sbjct: 133 ANSVQEYLISQGVPSTRLK-VISYGKERPIEICSEESCYAQNRRSVTVISAGAG 185


>gi|303325524|ref|ZP_07355967.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863440|gb|EFL86371.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 332

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     + + +L +   ++  +     I  G TD          N  LS +RA + 
Sbjct: 232 FAFNSYALDGKAMGILNEAASLIKANPNKRVILNGWTDWI---GTDAYNKVLSQNRANAV 288

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L K G+   R++ I G      K  +        NRR +I
Sbjct: 289 KNYLEKQGIPASRMTAI-GRGKSF-KYDNKTEEGRYMNRRTEI 329


>gi|297560820|ref|YP_003679794.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845268|gb|ADH67288.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 477

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 16/257 (6%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
            + ++ +    +   S +  IGS          +            +  + +L  +   G
Sbjct: 51  VDPLEQAFYSPVRDESGETTIGSEVVPHWVMDADYEYQVHFPPLPEDTERITLVVNGSFG 110

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           +         +   +     + P        +    R  ++  +       L +      
Sbjct: 111 EFTGIPVIDGEPPAEPPGDSVDPSDINPGDTVAVPLREAEMTSEPEDYARDLYSIIEDSS 170

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRG 270
               +T     I +       +FD   +   PE   VL ++ +    + +     I + G
Sbjct: 171 RTRTSTTDEETIGLHAD---VLFDFDEATLTPEAEDVLAEVVQETRENADPSRPPIRVVG 227

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASD 325
           HTD          N  LS  RA +   VL + G+  +   +  G               +
Sbjct: 228 HTDGR---GSEDYNQDLSERRAQAVLDVLEE-GLGTEYEYETEGRGAEEPLVEEGGADDE 283

Query: 326 PMNSANRRIDILVEDRQ 342
              + NRR++I  + RQ
Sbjct: 284 EARATNRRVEISYKIRQ 300


>gi|146985|gb|AAA24233.1| outer membrane protein II [Escherichia vulneris]
          Length = 238

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 18/148 (12%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263
             +N             +       ++  +F+ + +   PE    L ++   L++     
Sbjct: 94  QEENAPVVAPAPAPAPEVTTKTFTLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKD 153

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322
               + G+TD        + N +LS  RA S    L+  G+  ++IS   G         
Sbjct: 154 GSAVVLGYTDRI---GSEQYNQKLSEKRAQSVVDYLVAKGIPANKISA-RGMGESDPVTG 209

Query: 323 ---ASDPMNSA-------NRRIDILVED 340
               +    +A       +RR+ I V+ 
Sbjct: 210 NTCDNVKARAALIDCLAPDRRVAIEVKG 237


>gi|260063550|ref|YP_003196630.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88782994|gb|EAR14168.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 652

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 79/275 (28%), Gaps = 19/275 (6%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           KG       P  S+Q+     I +   +                     N        Q+
Sbjct: 382 KGSVQNVGTPVNSAQDDFTYVISDTTREGYFASNRPGGPGGDDIYGFVENRPLQFECIQA 441

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                     +E           E++            + E  L   +   ++   +   
Sbjct: 442 ISGTVRNKITNELLAGATVRIIDEQNNEVSSAITDSRGNYEITLDCNQPNFVRASREGYV 501

Query: 201 STLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQ 253
                L  +D   + V F      I     D     +      FD   +   P+  + +Q
Sbjct: 502 PAEEYLSPSDGKPRVVDFYLEPETITAGYGDDLAKLLQLSTIYFDFDKANIRPDAEIEIQ 561

Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           K+   +       I    HTD+         N  LS  RA S  + ++  G++ +R+ + 
Sbjct: 562 KVIAAMEKYPSLRIKANSHTDSR---GPDAYNLALSQRRADSTVRYMISKGIAPERL-EG 617

Query: 313 SGFAHHRLKIASDP-------MNSANRRIDILVED 340
            GF   RL    D         +  NRR + ++ +
Sbjct: 618 EGFGESRLINRCDDGVPCSAQEHELNRRSEFIILE 652


>gi|288941479|ref|YP_003443719.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288896851|gb|ADC62687.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 680

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 87/308 (28%), Gaps = 33/308 (10%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           +T +     V+ I++               P    + T  +G    +     +++  +  
Sbjct: 398 ITAM-----VIGILSGIGLVGWYIQSSSLKPIASPIET--QGQDTTEKAARSAAERLVPS 450

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                 T  +    +  +  ++      + +    +  +      +     +      ++
Sbjct: 451 VPVTEQTPETPPFDVLISLAQEPSGPEADAVTVEESVIEEAPGTVAGDSPLQTNAASSET 510

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
             + ++    E     P            +RL+     +S  +  L  ++I         
Sbjct: 511 ESVPEAAATAEPETEAPSESVPAPDRPGLERLESGLAALSIEVERLAPNHIR-------- 562

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN 279
                    D      F   S         +L +   +L     V   I  HTD      
Sbjct: 563 --------ADLSRLIQFRDGSVALDESARTLLARFAGLLKEDERVRLHIVTHTDTQ---G 611

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----NRRID 335
              +N  LS  RA     +L   G+   RI+   G      K   +         NRRI+
Sbjct: 612 ATTNNQVLSERRAADIALILRLEGIGASRITH-EGKGMSEPKFTREEERRLGPWINRRIE 670

Query: 336 I-LVEDRQ 342
           I L+E  +
Sbjct: 671 IDLIESDE 678


>gi|163866824|gb|ABY47582.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 337

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    +        NRR+
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 331


>gi|315122505|ref|YP_004062994.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495907|gb|ADR52506.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 190

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 8/143 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        V        I            F   S +      V+      
Sbjct: 47  HLDKAEDELRMQLQDVDVSIIRKYDQIT---CHIPVHIAFSSGSILHKDIVPVLNSIATT 103

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +    +  I+I GHTD+         N  +S  R+      L++ GVS DR +   GFA+
Sbjct: 104 LNKFPSTKIAITGHTDSI---GTLEYNLLISQQRSQIITDYLIEKGVSPDRFAPPQGFAY 160

Query: 318 HRLKIASDPMNSA--NRRIDILV 338
            R    +D       N+R++I +
Sbjct: 161 KRPIDTNDTQEGRKNNQRVEINI 183


>gi|224536108|ref|ZP_03676647.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522279|gb|EEF91384.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 667

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 34/167 (20%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +  +NI +  L+E       I+         ++   +    E+ V L ++ E+L  + 
Sbjct: 501 EEMATENINEDRLYELEFPLSSITRPVLIENIFYEFDKADLTSESTVALDELIELLNDNP 560

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK- 321
              I +  H D   ++     N RLS  RA S  + L+K G+  +R++   G+   + K 
Sbjct: 561 NVTIELSAHCD---YKGNDDYNLRLSQRRAESVVRYLIKGGIDPERLTP-KGYGEQQPKT 616

Query: 322 ----------------------IASDPMNSA------NRRIDILVED 340
                                 I + P          NRR +  V  
Sbjct: 617 VTKFTLKSAPFLKEGDVLTEEFIKNLPPEQQEICNAINRRTEFKVLR 663


>gi|332559394|ref|ZP_08413716.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332277106|gb|EGJ22421.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 310

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 12/181 (6%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           +  E      L   +  A    + ++ L +  +  +   V D  V           ++  
Sbjct: 133 DGAEGAEAVSLLISRSDATGFVQVIEALPRTATPPVPVAVPDEPVAAEAAPPAAGTLIPR 192

Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           + +     +    F   S+         L  + + L        +  GHTDA        
Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            N  LS  RA S  + L+ + GV   +++   G  +   +  +      + NRR+++++ 
Sbjct: 250 GNVTLSRARAASVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308

Query: 340 D 340
            
Sbjct: 309 A 309


>gi|126740601|ref|ZP_01756288.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
 gi|126718402|gb|EBA15117.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
          Length = 644

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           S+ D      F+  S+     +   L K  EVL     +   I+GHTD+         N 
Sbjct: 490 SLQDVTGKIHFEPGSATVAAGSSATLDKAAEVLELCGPIRLEIQGHTDSQ---GREGMNQ 546

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            LS  RA S    L    +    I    G+        +D       NRRI+  V
Sbjct: 547 SLSQARAQSILNELRARRIRTSTILA-KGYGESTPIATNDSEEGREANRRIEFKV 600


>gi|126642864|ref|YP_001085848.1| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
          Length = 346

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 221 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 277

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 278 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 329


>gi|300870393|ref|YP_003785264.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
 gi|300688092|gb|ADK30763.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
          Length = 266

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 18/177 (10%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                + A+    R   + + +   +S L ++     V       G +I++   +    F
Sbjct: 85  AGGANVDALPAMDRGYSMGRSVDKAVSVLESEIKNNKVRVSEDERGFVITLGADQY---F 141

Query: 238 DKSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPF------RNIARDNWRLSL 289
           + +S+             KI  VL+     I I GHTD+              +NW LS 
Sbjct: 142 ESASTNIVNTQNNTETFIKIASVLSTLPNDIRIEGHTDSGAILEGSITEQWFGNNWGLST 201

Query: 290 DRAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
            RA    + L        +  ++   ++G+A  R   ++D     + NRR+DI+V  
Sbjct: 202 ARAIVVLEKLFESDQTGKLDINK-YSVAGYADTRPVASNDLPDGRALNRRVDIVVVR 257


>gi|237752655|ref|ZP_04583135.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
 gi|229376144|gb|EEO26235.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
          Length = 233

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                 + ++    L  S  + +  ++ +     P+    I      + + ++   + + 
Sbjct: 16  ATFDTQKIAQAVGSLEGSFAVLEKGSQSQINPPAPIKATPIETQVEMENVLNIFGSLITD 75

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAH 261
            + +   +    V  E    G++I I ++    +F   S+    P  I  L+++   L  
Sbjct: 76  YNEVNRISNGPSVELEEAERGVIIRIPEEL---LFATGSAELTNPSGIAFLKRLSLELLR 132

Query: 262 STEVISIR--GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + + ++  GHTD  P R  A   DN  LS+ R  +  ++L+K G+ ++RI    G   
Sbjct: 133 MPKAVLVKAIGHTDNVPMRANAVFADNLELSVARGVNVAELLLKQGLEKNRIL-GGGEGE 191

Query: 318 HRLKIASD--PMNSANRRIDILV 338
                 +D   + + NRR+D+ V
Sbjct: 192 FSPIANNDIPALRAKNRRVDLYV 214


>gi|158314079|ref|YP_001506587.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
 gi|158109484|gb|ABW11681.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
          Length = 407

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    ++    T   L K+   L      + + GHTD++        N  LS+DRA  A 
Sbjct: 305 FPVGDTVLGASTRSGLDKVARALLPGDLTVIVGGHTDST---GPRALNQALSIDRARVAR 361

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
           + L+  GV  +RI + +GF   +    +      +ANRR+D+ 
Sbjct: 362 EYLVMRGVPAERI-RAAGFGPDQPIADNASTSGRAANRRVDVT 403


>gi|294678711|ref|YP_003579326.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294477531|gb|ADE86919.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 173

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +T  F    S    E    L    + L         I GH D          N  L   R
Sbjct: 63  DTVRFVVDQSTLTDEARATLSGQAQWLNSHGNYAAIIEGHADEQ---GTREYNLALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A S  Q L+  GV   R+  +S +   R        +  S NRR
Sbjct: 120 ASSVQQYLISQGVPATRLRTVS-YGKERPIATCASESCFSQNRR 162


>gi|163866750|gb|ABY47335.1| putative outer membrane protein [Aeromonas hydrophila]
          Length = 339

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 79/299 (26%), Gaps = 33/299 (11%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +      N F     T + G         R + +                + +G+     
Sbjct: 51  QEDAAAANAFMGYNFTENFGTELGYQYTGRGNTDGNRYESQGATLSGIARMPVGNDFSLF 110

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                         +  ++    +          +  + DL+       +      + E+
Sbjct: 111 AEGGAYWGHTDGLGTSDTKVSPLAGAG---VTYKVNDALDLQARYRYMWDVADLHANGER 167

Query: 183 ILAMKRKKRLQDLAK-----KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             A +    L+ +        ++   + +V +              +        +  +F
Sbjct: 168 YKANQSIATLEAVYHPFRTSYVAPVAAPVVEEAPAPAPQVVEKNFAL-------NSDVLF 220

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
                   PE +  L  + + +           + G+TD          N +LS  RA +
Sbjct: 221 AFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLSEARART 277

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDRQ 342
               L+  G++  ++  I G         +        +        +RR+++ V   Q
Sbjct: 278 VANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGVQ 335


>gi|269968606|ref|ZP_06182608.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
 gi|269826817|gb|EEZ81149.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
          Length = 288

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   LS              +    +            F   S+   P+
Sbjct: 118 QRRRLNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPK 177

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH DA+        N +L+  RA    + L   G++ 
Sbjct: 178 YMGHLAEAAYILRDHPNLSLVVTGHADAT---GTPDYNQKLAQARAEQVKRYLTVFGITS 234

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +R++       +      +       NRR+ I V    
Sbjct: 235 ERVTT-KSVGDNLPLYEGETPAVRLTNRRVSIEVISPN 271


>gi|255037115|ref|YP_003087736.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254949871|gb|ACT94571.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 484

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   ++  PE   +L+ +  ++  +   + + GHTD        R N  LS  R  +  
Sbjct: 381 FDTDKNVLKPEFQELLKNVAALMNKNGCRLQLAGHTDRR---ASDRYNIALSKRRVEAVK 437

Query: 297 QVLM-KSGV-SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             L+ ++G+    ++  +  F   +    S        NRR+++ + 
Sbjct: 438 NFLINEAGLQDPSKVI-VDYFGSFKPIADSATRPGLQKNRRVELKLL 483


>gi|167950569|ref|ZP_02537643.1| flagellar motor protein MotD [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 89

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 37/78 (47%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
          + + +    + P +   W + YADF+T+L AFF+VM+ +++ ++   + +    +   K 
Sbjct: 1  MARSRRKRVEEPVHHERWIVSYADFITLLFAFFVVMYSLSSVNEGKYRVLSNTLSQAFKE 60

Query: 76 LMTASKGIFDEQNPPERS 93
               + I   +   ++ 
Sbjct: 61 AGRTLEPIQLGELKRDQG 78


>gi|163866826|gb|ABY47583.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 343

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|37704616|gb|AAR01580.1| OprF [Pseudomonas sp. MFY63]
          Length = 297

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+  P +   ++ + + +    +  ++  GHTD+         N +LS  RA + 
Sbjct: 214 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 270

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKI 322
            QVL    GV   R+  + G+   R   
Sbjct: 271 KQVLTSQYGVESSRVQSV-GYGESRPVA 297


>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
 gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
          Length = 357

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 18/142 (12%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIR 269
           +          +       R+  +F+ + +   PE    L ++   L+        + + 
Sbjct: 210 EPAPVVEPAPVVENKRFTLRSDVLFNFNKATLKPEGQQALNELYNELSSIDPTQGRVLVV 269

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASD 325
           G TD          N  LS  RA S    L+  GV    I    G             + 
Sbjct: 270 GFTDRI---GSQNYNLPLSQKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDNV 325

Query: 326 PMNSA-------NRRIDILVED 340
              +A       +RR++I ++ 
Sbjct: 326 KGRAALIECLAPDRRVEIEIQG 347


>gi|169632496|ref|YP_001706232.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter baumannii SDF]
 gi|169151288|emb|CAO99984.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter baumannii]
          Length = 357

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 232 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 288

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 289 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 340


>gi|303237447|ref|ZP_07324013.1| OmpA family protein [Prevotella disiens FB035-09AN]
 gi|302482397|gb|EFL45426.1| OmpA family protein [Prevotella disiens FB035-09AN]
          Length = 226

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 8/148 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K+++  +  V +  V+          + ++     +  +F  +SS     +   L   
Sbjct: 75  MDKVAAQTAAKVENAKVEKTKDANGLDCVKVTF---DSGILFATNSSSLSAASKKDLNNF 131

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL  + +    I+G+TDA         N  LS  RA +    L   GV   +I  + G
Sbjct: 132 AGVLKQNRDCDVAIQGYTDA---SGNDNINLPLSEKRATAVSSYLRAQGVPAGQIRTVEG 188

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
                    +  ++ ANRR+++ +   +
Sbjct: 189 LGSANPI-ENKRISQANRRVEVYMYASK 215


>gi|99082304|ref|YP_614458.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99038584|gb|ABF65196.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 352

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 71/236 (30%), Gaps = 15/236 (6%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
                       +N  +LS  +       SL      G    +  +     +      LP
Sbjct: 121 EVIPAPDMAVNLSNYEFLSAQEPQSGTAVSLLVSRLGGSIYVQVIERHDPAHLLRPQTLP 180

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI-------VKGVLFETTRTGILISII 229
            L        +   +    A+  +S     +   +          +     R  + +   
Sbjct: 181 ALGPSTQPVDRDTIQADASAQGAASNTENGLEQALLVDAIKKGGSLSTGALRDVLQLQGH 240

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288
                  FD +S+         L+ +   ++     + +  GHTD        + N  LS
Sbjct: 241 VPLLDLEFDTASAQVGEGPYDSLKHLATFMSDHESAVILLVGHTDTV---GGLQGNIALS 297

Query: 289 LDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             RA S  + L+ + GV   RI +++G  +      +        NRR++ ++   
Sbjct: 298 ERRAASVRERLITRYGVDGARI-QVAGAGYMAPLAPNTSEEGREINRRVEAVLVRP 352


>gi|323143608|ref|ZP_08078285.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
           12066]
 gi|322416671|gb|EFY07328.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
           12066]
          Length = 181

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + NT  F+  S       + V+Q   + L  + +  I I GHTD          N  L  
Sbjct: 75  ENNTIYFNYDSDQIHDNYVGVMQAHAKYLRENPDAHIIIEGHTDER---GTPEYNIALGE 131

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            RA S  + +   GV  +++S +S +   +  +   ++   + NRR  I
Sbjct: 132 RRARSVARYMQNLGVDVNQLSIVS-YGEEKPLVVGHNENAWAKNRRAVI 179


>gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1]
 gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1]
          Length = 370

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 8/134 (5%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
             V          +   +   +  F   S++   E    ++++   +  + E    I GH
Sbjct: 235 HKVDSVGCTLYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGH 294

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328
                       N  LS  RA +  ++L++  G+S+ R++  +G+   +  +A +     
Sbjct: 295 ASNV---GKPEYNMVLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGNSKEAH 350

Query: 329 SANRRIDILVEDRQ 342
           +ANRRI+ +V   +
Sbjct: 351 AANRRIEAIVTTTE 364


>gi|221066746|ref|ZP_03542851.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
 gi|220711769|gb|EED67137.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
          Length = 170

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S    P    +++   + + ++     I RGHTD+         N  L   R
Sbjct: 65  HIVYFDFDSYTVRPSDRGIVESHAQWMRNNPRQALILRGHTDSR---GGTEYNLALGQKR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           + S  Q L   G+   R+  IS +   RL    +S+  +  NRR++ 
Sbjct: 122 SESVLQSLQILGIDPSRVEAIS-YGKERLVDLGSSNDAHQLNRRVEF 167


>gi|319786286|ref|YP_004145761.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464798|gb|ADV26530.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 170

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++ T  FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 61  RQRTVYFDFDQDALKPEFQAIVGCHAKYLRDRPSARITLQGNADER---GSRAYNQALGE 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            R  +    L  +G S  ++ ++  +   R           + NRR++I+
Sbjct: 118 RRGNAVNSALQAAGGSASQL-EVVSYGEERPVCTESTESCWAQNRRVEIV 166


>gi|107103038|ref|ZP_01366956.1| hypothetical protein PaerPA_01004107 [Pseudomonas aeruginosa PACS2]
          Length = 314

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 171 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 227

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 228 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 274


>gi|163866832|gb|ABY47586.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 334

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    +        NRR+
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 331


>gi|296390513|ref|ZP_06879988.1| hypothetical protein PaerPAb_20266 [Pseudomonas aeruginosa PAb1]
          Length = 158

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   +LA   + + + GHTD          N +LS  R
Sbjct: 51  SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 107

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    +    +        NRR+ I+V
Sbjct: 108 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 155


>gi|91775931|ref|YP_545687.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gi|91709918|gb|ABE49846.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 363

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSL 289
           +  +F         E    L   + E +    EV  + I GHTD          N +LS 
Sbjct: 244 SEVLFGFDKDNLKEEGKAKLNADVVEKMKAHPEVELVLITGHTDRI---GDETYNQKLSE 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILVE 339
            RA +  Q L+  G+ E R+  + G       +    +           NRR  ++I V+
Sbjct: 301 RRANTVKQYLISQGIEESRLHAV-GKGESEPVVECAGVRGKKAIECLQPNRRVVVEIEVQ 359

Query: 340 D 340
            
Sbjct: 360 R 360


>gi|50085748|ref|YP_047258.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
 gi|49531724|emb|CAG69436.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
          Length = 254

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 65/232 (28%), Gaps = 9/232 (3%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
            + +      +  ++                 K  +   S         T +     K+ 
Sbjct: 28  PIIVEGVVPNEASKQAILQKMQAVYGADQVVDKVQVRPVSAPYGWSDSVTQVISPDLKKV 87

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIID 230
                 +   ++    +     D+   IS   S           +        I+   + 
Sbjct: 88  KQGKLTVRGTQVELTGKMSNPNDIQPTISQFQSLVQPPYRFNSQLTINQAEQKIVDDALK 147

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSL 289
            R    F+  S+I       +L ++   L            HTD+      A  N  LS 
Sbjct: 148 NRIIE-FESGSAILTASGQQILDEMAAALKKVGGKKVKIIGHTDS---SGDASKNLVLSQ 203

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +RA +    L+   +S D +S   G   ++    +        NRRI+  V 
Sbjct: 204 ERAVAVKNYLITKNISSDNLST-EGVGSNKPVADNTTAEGRRKNRRIEFEVL 254


>gi|319943001|ref|ZP_08017284.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
           51599]
 gi|319743543|gb|EFV95947.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
           51599]
          Length = 189

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           +    F+  S   LPE   +++     L+   +  I + G+TD          N  L   
Sbjct: 83  KREVFFEFDSFAILPEYQPIIEAHANYLSAHRDKHIVLEGNTDEF---GSREYNLALGQK 139

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GV E+++  IS +   + + +   +   S NRR+DI
Sbjct: 140 RADAVRRALSTLGVDENQMESIS-YGEEKPRASGTDESSRSQNRRVDI 186


>gi|282891235|ref|ZP_06299738.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498928|gb|EFB41244.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 238

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  +S++    E ++ L+K+   L       + I GH D          N  L   R+ +
Sbjct: 134 FPYNSNLIKGEENLLALRKVANYLKKHDRVYVFIEGHCDER---GAEAYNLALGSRRSNA 190

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341
             ++L+K GV+ + +  IS +   R      ++     NRR +  +  R
Sbjct: 191 VREILIKEGVNPENLFTIS-YGKERPLFLDHNEESWGQNRRAEFKIYQR 238


>gi|255035577|ref|YP_003086198.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254948333|gb|ACT93033.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 433

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 88/284 (30%), Gaps = 11/284 (3%)

Query: 59  DDTKKAIEQYFN-PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
            +   ++   F   F          I +      ++        + E     S   KIG 
Sbjct: 154 PEQLDSLPNNFTLQFDLLGNKQVSNIGELMISLMKADDTDQKFDLAESDHIKSPSFKIGF 213

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +       +L  +   +    +    +    +++ K     +   +   ++  +   LP 
Sbjct: 214 SPTSADKGQLHYSTNLIGKQYKYGVPEFRTDKNTVKVAIWRQKQRVRVYLDSTKILDLPR 273

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                                 S         NI+  V    TR  ++       +   F
Sbjct: 274 ALDPMATLNTLA--FTAKNPDFSQEGGAFFIGNIILAVGAADTRNKLVTEGRFTTHGIQF 331

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           + +S   LP +   L+ + +VL  +    + I GHTDA         N +LS+ RA +  
Sbjct: 332 NVNSDEILPLSYGALKDVAQVLQENPGVKVQIVGHTDAD---GSDESNVQLSMRRAEAVK 388

Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
           + +     +   R+    G        ++D     + NRR++ +
Sbjct: 389 KAMEAHFAIDGTRLQT-DGKGESSPIDSNDTPTGKANNRRVEFI 431


>gi|213963879|ref|ZP_03392126.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
 gi|213953469|gb|EEB64804.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
          Length = 658

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD   +    +    L KI  ++     +   +R HTD+       + N  LS 
Sbjct: 544 KIENIYFDYDKANIRKDAAEQLAKIVAIMKEYPTMKVDVRLHTDSR---GSDKYNLALSE 600

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S  + ++  G+ ++RI    G+   +L          ++  + ANRR + ++
Sbjct: 601 RRAKSTIKWIVSHGIKKNRI-TGKGYGETQLVNGCSNGVPCTEEEHQANRRSEFII 655


>gi|260548855|ref|ZP_05823077.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
 gi|260408023|gb|EEX01494.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
          Length = 350

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|148555193|ref|YP_001262775.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148500383|gb|ABQ68637.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 373

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S    E   +L       A + +  + + GH D        + N  LS  
Sbjct: 265 PFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADK---SGSDQYNVGLSQR 321

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           RA S    L   GV +  I+    F   R  + +        NRR++I 
Sbjct: 322 RADSVKAYLAGKGVPDSAITT-EAFGESRPLVETADGVREPQNRRVEIT 369


>gi|153008551|ref|YP_001369766.1| peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
           49188]
 gi|151560439|gb|ABS13937.1| Peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
           49188]
          Length = 168

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I++ GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITVEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 167


>gi|148839593|sp|A3M8K2|OMP38_ACIBT RecName: Full=Outer membrane protein omp38; Flags: Precursor
 gi|193078282|gb|ABO13246.2| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
          Length = 356

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|129307154|gb|ABO30515.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 340

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
 gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
          Length = 354

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 16/131 (12%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++    +  +   F    +   P+   VL  I   +A      + + G+TD         
Sbjct: 228 VVNKTFNLNSDVTFAFGKADLKPQAQGVLDGIYGEIAQVKSANVKVAGYTDRI---GSDA 284

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------N 331
            N +LS  RA +    L+  GVS++ IS  +G+        +  D +            +
Sbjct: 285 YNQKLSQKRAETVANYLVAKGVSQNAISA-TGYGKANPVTGNKCDAVKGRKALIACLADD 343

Query: 332 RRIDILVEDRQ 342
           RR++I V   +
Sbjct: 344 RRVEIAVSGTK 354


>gi|254787356|ref|YP_003074785.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
            T7901]
 gi|237685616|gb|ACR12880.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
            T7901]
          Length = 3177

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 9/106 (8%)

Query: 237  FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F  +S++   ET   L  + + +A  +    + I GH D          N  LS  RA +
Sbjct: 3074 FAFNSAVLSAETQAQLDALAQGVAAANYDFRVKIAGHADWV---GSEAFNQGLSEKRANA 3130

Query: 295  AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
                L +   ++ ++     G+   +    ++     + NRR++I 
Sbjct: 3131 VANYLSERLQLNAEKWDT-RGYGEVKPVADNNSAQGRAQNRRVEIT 3175


>gi|323700324|ref|ZP_08112236.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323460256|gb|EGB16121.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 174

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 234 TPMFDKSSSIPL-PETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
              F  +S++    ++   L ++G  L         + I GHTD+         N +LS 
Sbjct: 67  YIYFATNSAVITGEQSFRQLDELGRALTSSALRGARMEIGGHTDSV---GSDAYNLQLSR 123

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            RA +    L K  G +      ++G+       +++       NRR+ I 
Sbjct: 124 KRAQAVSDYLNKKYGFTAA---AVTGYGESAPVASNETAEGRAGNRRVVIT 171


>gi|254467376|ref|ZP_05080787.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206688284|gb|EDZ48766.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 634

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+  S+    ++   + +I E+L       + I+GHTD+         N  LS 
Sbjct: 493 SDGKITFEPGSATIAADSAGTMDRIAEILGRCGPVRLEIQGHTDSQ---GREAMNQNLSQ 549

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            RA S    L    V         G+        +D       NRRI+  +   
Sbjct: 550 ARAQSVLNELRARRVVTS-TFAAKGYGESTPIAGNDTEEGREANRRIEFKLIRP 602


>gi|37704632|gb|AAR01588.1| OprF [Pseudomonas sp. MFY78]
          Length = 317

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 211 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 270

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL  + GV   R+  + G+   R   
Sbjct: 271 DSV---GPDAYNQKLSERRASAVKQVLTGQYGVESSRVQSV-GYGESRPVA 317


>gi|332702326|ref|ZP_08422414.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332552475|gb|EGJ49519.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 243

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 8/165 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L +    AM++++R++DL        S +    + + +       G+ + + D+    +
Sbjct: 76  ELLENPREAMRKQQRIKDLLFPDDIMPSQVDRALLEENLQILARDEGVALVLSDKL---L 132

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F    +      + +L++I  VLA  T  +++ GH+D       +  N+ +S +RA    
Sbjct: 133 FAMGEAKLKDSALPILERIAYVLAFMTAPVNVAGHSDM--VGGRSDGNYAISANRAMEVL 190

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILVE 339
           Q L + G+   R+  +S F   +  +  + P   + NRR++ILV+
Sbjct: 191 QFLQEYGLDNRRL-SVSAFGPDQPLLEGNGPAVWNKNRRVEILVK 234


>gi|83941418|ref|ZP_00953880.1| OmpA domain protein [Sulfitobacter sp. EE-36]
 gi|83847238|gb|EAP85113.1| OmpA domain protein [Sulfitobacter sp. EE-36]
          Length = 632

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+      +  + +I E+L    ++   ++G+TD+         N  LS  RA S 
Sbjct: 498 FEPGSATIDASALGTMDQIAEILQDCRDIALEVQGYTDSQ---GREEMNLALSQSRAQSV 554

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L    V         G+       ++D       NRRI+  +
Sbjct: 555 LNELRARRVITGSFVA-KGYGEESPVASNDTEEGREANRRIEFKL 598


>gi|87121335|ref|ZP_01077225.1| probable outer membrane protein [Marinomonas sp. MED121]
 gi|86163492|gb|EAQ64767.1| probable outer membrane protein [Marinomonas sp. MED121]
          Length = 298

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 77/282 (27%), Gaps = 19/282 (6%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +AI +Y +         S  IF         S        +       +           
Sbjct: 29  QAITRYQSELNDAQWLLSGDIFSCSLSHPIMSYGDGHFIKNAGEPMKFILNPGNEKLGPG 88

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
               +     +    +       +        +   K  +   +        L       
Sbjct: 89  NVYIISQAPNWSPGLKPETLEVLAYPGYGMTVEVGGKVAERMLT-------SLNKGLHPI 141

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           +     +   + +   +++       +   + +          I     R+  +F ++  
Sbjct: 142 LAGSAWESGRETIEVVLTNINFAPAYNEFRRCMASLLPVNYDQI----ARSAVLFPENGV 197

Query: 243 IPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +        L  +   +A+    E I I GHTD+       RDN  LS  RA +    L+
Sbjct: 198 LLSTRMKDRLDLVALYVANDPSVEYIYIDGHTDSL---GSRRDNRELSKQRAEAVTAYLL 254

Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           + GV  ++I            I +        NRR+ I +E 
Sbjct: 255 EQGVEVEKIIS-RYHGERYPTIDNKTRANRERNRRVTIRLEK 295


>gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis]
 gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis]
          Length = 366

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 243 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 299

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 300 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 358

Query: 339 EDRQ 342
           +  +
Sbjct: 359 QGSK 362


>gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|84516651|ref|ZP_01004010.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
           SKA53]
 gi|84509687|gb|EAQ06145.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
           SKA53]
          Length = 176

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE   +L    + L  + +  ++  GH D          N  L   R
Sbjct: 65  DRVLFAIDQSTISPEGRTILDGQAQWLLTNADYRAVIEGHADEQ---GTREYNLALGFRR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  GV   R+ +++ +   R     +++   S NRR
Sbjct: 122 ANAVREYLVSRGVPSARL-EVTSYGKERPIEVCSNEACYSQNRR 164


>gi|37704626|gb|AAR01585.1| OprF [Pseudomonas sp. MFY71]
          Length = 321

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPATHTTVEGHT 274

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL +  GV   R+  I G+   R   
Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVETARVQSI-GYGESRPVA 321


>gi|50956547|gb|AAT90794.1| conserved hypothetical protein [uncultured proteobacterium QS1]
          Length = 511

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 13/151 (8%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETI--VV 251
              I  TL   +   + +G L         +LI   D      F    +    E      
Sbjct: 341 KINIMETLPQPLPKILSEGWLEVRADPRGWLLIFTSD----GAFATGQARLSEEFKKKRN 396

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED--R 308
           ++++GE LA     + + GHTD  P+RN  +  N +LS  RA +    + +S  S    R
Sbjct: 397 IERLGEALAPWPGDLEVIGHTDNKPYRNSPSNSNLKLSEGRAQTVADKMRESMQSSKYQR 456

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337
                G         +D     S NRR+DIL
Sbjct: 457 SVTSVGKGDTEPLDTNDTEQGRSRNRRVDIL 487


>gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis]
 gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis]
          Length = 371

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 304

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 305 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363

Query: 339 EDRQ 342
           +  +
Sbjct: 364 QGSK 367


>gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis]
 gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis]
 gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis]
 gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis]
 gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis]
 gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis]
 gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis]
 gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis]
 gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis]
 gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis]
 gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis]
 gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis]
 gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis]
 gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis]
 gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
 gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
 gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis]
 gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis]
 gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis]
 gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis]
 gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis]
          Length = 367

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|296130397|ref|YP_003637647.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
 gi|296022212|gb|ADG75448.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
          Length = 355

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +  +E    +       P   +   A+   + L     +  + +    + ++   V 
Sbjct: 172 SAGAVPVEDGALEPVADEPAPRPGQGWPALPDPELLATADPEERTFVLTRRSSDLAGDVQ 231

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDAS 275
            E +   + I +     + +F   S+   PE    L ++   +A   T  + + G+TD+ 
Sbjct: 232 VEESPEQVGIVL---DASVLFAFDSAELAPEAQSRLAEVAADIAARGTGEVVVTGYTDSD 288

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
                   N  LS  RA S    L  +       S + G        ++D       NRR
Sbjct: 289 ---GDRSYNQTLSEQRAQSVVAALQPAAGGAVTFSAV-GEGESDPVASNDTDEGKQANRR 344

Query: 334 IDIL 337
           + I+
Sbjct: 345 VTIV 348


>gi|238024905|ref|YP_002909137.1| OmpA/MotB [Burkholderia glumae BGR1]
 gi|237879570|gb|ACR31902.1| OmpA/MotB [Burkholderia glumae BGR1]
          Length = 225

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 6/158 (3%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
               E        +      +  +   +        L+ L        +   +   G+ +
Sbjct: 52  ARSRELELRSVEKQAASQTTQGTRAGAESTAARQRMLALLEPLRAKHEISIASLPQGVEV 111

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-ARDN 284
           +I  +    +F+   +  LPE++ VL ++  VL       I + GHTD+ P        N
Sbjct: 112 TINAK---ILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPISTSKYESN 168

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           W LS  RA +  + LM  GV   R++ + G A +   +
Sbjct: 169 WELSSARAGAVVRFLMDKGVGAHRMAAV-GRADNVPLV 205



 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%)

Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
          D+T    G W I YAD +T LM  FL ++++        +          +       G 
Sbjct: 19 DETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGA 78


>gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein
           [Haemophilus parasuis SH0165]
 gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane
           protein [Haemophilus parasuis SH0165]
 gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis]
 gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis]
          Length = 371

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 304

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 305 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363

Query: 339 EDRQ 342
           +  +
Sbjct: 364 QGSK 367


>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
           30120]
 gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
           30120]
          Length = 357

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 229 RSDVLFNFNKATLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRI---GSQNYNLPLS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  GV    I    G         +               + +RR++I 
Sbjct: 286 QKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIE 344

Query: 338 VED 340
           ++ 
Sbjct: 345 IQG 347


>gi|332290107|ref|YP_004420959.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
           anatis UMN179]
 gi|330433003|gb|AEC18062.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
           anatis UMN179]
          Length = 150

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            +  + NT  F        PE   +L    + L  ++  + + GHTD          N  
Sbjct: 41  ELQQRYNTVYFGFDKYDIQPEYAQLLDAHAQYLTDTSSKVQVEGHTDPR---GTPEYNIA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   GV   ++S IS +   +  +        + +RR
Sbjct: 98  LGQRRADAVKSYLEGKGVQGGQLSTIS-YGEEKPAVLGHTEADYAKDRR 145


>gi|325123365|gb|ADY82888.1| putative outer membrane protein precursor (OmpA-like)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 347

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +      + N RLSL RA
Sbjct: 222 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 278

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 279 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 330


>gi|110636839|ref|YP_677046.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110279520|gb|ABG57706.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1313

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 234  TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
               F +  +  L  +   L ++  +L  +  +   + G+TD       A+ N  LS  R 
Sbjct: 1207 HVYFARGGTTLLESSYESLDQLYTLLTDNPTMRIELLGYTDNQ---GDAKLNVLLSEQRV 1263

Query: 293  YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
             +    L+  G++E RI    G+       ++        NRR++  +  +
Sbjct: 1264 AAIKDYLVGKGIAETRIG-GKGYGGANPIASNATEETRQLNRRVEFKIVSK 1313


>gi|260557183|ref|ZP_05829399.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
 gi|75438841|sp|Q6RYW5|OMP38_ACIBA RecName: Full=Outer membrane protein omp38; AltName: Full=Outer
           membrane protein ompA; AltName: Full=Outer membrane
           protein ompAb; Flags: Precursor
 gi|40287452|gb|AAR83911.1| outer membrane protein A [Acinetobacter baumannii]
 gi|260409289|gb|EEX02591.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
          Length = 356

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|300771828|ref|ZP_07081699.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761214|gb|EFK58039.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 650

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D        +   +L ++   +  +    + +  HTD+      A+ N +LS  R
Sbjct: 538 ENIYYDLDKYNIRDDAKPILNQLARTMRDNPGLRVELSSHTDSR---ATAKYNMKLSQSR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A SA   ++  G++ +R+    G+   +L          ++  + ANRR +I + D
Sbjct: 595 AQSAVDYIVSRGIARNRLIA-KGYGESQLVNNCKDGVSCTEAQHQANRRTEIKILD 649


>gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
 gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
          Length = 363

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + +   PE    L ++   L+        + + G TD          N  LS
Sbjct: 235 RSDVLFNFNKASLKPEGQQALNELYNELSSIDPTQGRVLVVGFTDRI---GSQNYNLPLS 291

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  GV    I    G             +    +A       +RR++I 
Sbjct: 292 QKRAQSVVDYLVSKGVPASAI-AAEGRGKEDPVTGNKCDNVKGRAALIECLAPDRRVEIE 350

Query: 338 VED 340
           ++ 
Sbjct: 351 IQG 353


>gi|15596316|ref|NP_249810.1| YfiB [Pseudomonas aeruginosa PAO1]
 gi|218892915|ref|YP_002441784.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254234254|ref|ZP_04927577.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
 gi|254239490|ref|ZP_04932812.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
 gi|9947038|gb|AAG04508.1|AE004542_4 YfiB [Pseudomonas aeruginosa PAO1]
 gi|126166185|gb|EAZ51696.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
 gi|126192868|gb|EAZ56931.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
 gi|218773143|emb|CAW28955.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
          Length = 168

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   L     + + + GHTD          N +LS  R
Sbjct: 61  SKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    +    +        NRR+ I+V
Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165


>gi|116619652|ref|YP_821808.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222814|gb|ABJ81523.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 263

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 11/118 (9%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-----SIRGHTDASPFR 278
           I   I        FD   +    +    L +    L             I GH D     
Sbjct: 144 INDRIASDVQDAFFDYDKTDIRSDARDALTRNATALKAILNDFPGAAIVIEGHCDER--- 200

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334
             A  N  L   RA SA + L+  G+  DR+  IS +   R +    ++     NRR+
Sbjct: 201 GSAEYNLGLGDRRASSAKEFLVGLGIPADRLKTIS-YGKERPQCTEQNETCWQKNRRV 257


>gi|311694925|gb|ADP97798.1| peptidoglycan-associated lipoprotein [marine bacterium HP15]
          Length = 190

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  ++    E   VL      LA++      I GH D          N  L   RA + 
Sbjct: 89  FDFDTAEIKQEARDVLVAHARFLANNPGQNVRIEGHADER---GTKEYNLALGERRANAV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            + L+ +G S  ++  +S +   +  +  +S+   + NRR++++
Sbjct: 146 QRFLIVNGASRGQLETVS-YGEEKPAVMGSSESAWAQNRRVELV 188


>gi|299768851|ref|YP_003730877.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
           DR1]
 gi|298698939|gb|ADI89504.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
           DR1]
          Length = 347

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +      + N RLSL RA
Sbjct: 222 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 278

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 279 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 330


>gi|269960160|ref|ZP_06174536.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835131|gb|EEZ89214.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 345

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              +  +   ++       I + GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLSRSQQSTIAALYSYISVDDRVTKILVDGHTDNV---GSQLANLTVSRQRAEQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               L++ GV    + ++          +++     + NRR+ + +    
Sbjct: 269 VADALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRDN 317


>gi|27365951|ref|NP_761479.1| outer membrane protein [Vibrio vulnificus CMCP6]
 gi|27362100|gb|AAO11006.1| Outer membrane protein [Vibrio vulnificus CMCP6]
          Length = 280

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           ++KRL  L +++   LS        +       +  I+  + D  N    F  +S+   P
Sbjct: 115 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 173

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L K   +L   T   +++ GH DA+        N +L++DRA    + L   G+ 
Sbjct: 174 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 230

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            +RI+  S           +       NRR+ I ++  
Sbjct: 231 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 267


>gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|226069484|dbj|BAH36952.1| OmpA-like outer membrane protein [Pasteurella pneumotropica]
          Length = 347

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 19/197 (9%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
               +       E    +       +    +    +D    I S  +GL         + 
Sbjct: 158 AAGVEYALPSLPELALRVEYQWLASVGKDNKIAEDKDYTPWIGSVTAGLSYRFGQGAPVV 217

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                 ++    +  +   F    +   P+    L  I   +A  +   +++ G+TD   
Sbjct: 218 A---PEVVSKTFNLNSDVTFAFGKANLKPQAQATLDGIYGEIAQVSNAKVAVAGYTDRI- 273

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---- 330
                  N +LS  RA S    L+  GV+   I+  +G+           D +       
Sbjct: 274 --GKDAANLKLSQRRADSVANYLVAKGVAAQDITA-TGYGEANPVTGATCDAVKGRKALI 330

Query: 331 -----NRRIDILVEDRQ 342
                +RR++I V   +
Sbjct: 331 ACLAPDRRVEIAVNGTK 347


>gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis]
          Length = 369

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 303 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 361

Query: 339 EDRQ 342
           +  +
Sbjct: 362 QGSK 365


>gi|221640398|ref|YP_002526660.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161179|gb|ACM02159.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 310

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 12/181 (6%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              E      L   +  A    + ++ L +  +      V D  V           ++  
Sbjct: 133 EGAEGAEAVSLLVSRSDATGFVQVIEALPRTAAPPAPVAVPDEPVAAEAAPPAAGTLIPR 192

Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           + +     +    F   S+         L  + + L        +  GHTDA        
Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            N  LS  RA S  + L+ + GV   +++   G  +   +  +      + NRR+++++ 
Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308

Query: 340 D 340
            
Sbjct: 309 A 309


>gi|91223761|ref|ZP_01259025.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
 gi|91191253|gb|EAS77518.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
          Length = 288

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   LS              +    +            F   S+   P+
Sbjct: 118 QRRRLNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPK 177

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH DA+        N +L+  RA    + L   G++ 
Sbjct: 178 YMGHLAEAAYILRDHPNLSLVVTGHADAT---GTPDYNQKLAQARAEQVKRYLTVFGITS 234

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           +R++       +      +       NRR+ I V    
Sbjct: 235 ERVTT-KSVGDNLPLYEGETSAVRLTNRRVSIEVISPN 271


>gi|313204438|ref|YP_004043095.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312443754|gb|ADQ80110.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 743

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
           Q +T  +D       P    +L  I  +L       + I  +TD          N  LS 
Sbjct: 584 QMDTIYYDFDKWDIQPVAYSMLDSIVSLLKSYTMMHVEIASYTDKR---GTVEYNLWLSQ 640

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRIDILVED 340
            RA +    +++ GV   RI    G+  +RL +            +  NRR +I V  
Sbjct: 641 QRANAVVNYIVRQGVDAGRIKA-RGYGKNRLIVGDPSDISDREKIDQINRRSEIKVTG 697


>gi|332702327|ref|ZP_08422415.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332552476|gb|EGJ49520.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 282

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 18/155 (11%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L  L+ ++    + F   +   LI I+   +  +F+   +        ++ ++  VL 
Sbjct: 87  ELLKPLLYEDARDDIRFAENK---LIQIMSISSDILFEPGQTKLSERGRDLVGRMAPVLR 143

Query: 261 HSTEVISIRGHT------------DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
              +   + GHT            D  P        WR+SL RA + Y+ L+  GV  +R
Sbjct: 144 ELPQPFLLAGHTSTLRDELKTEYLDYKPKDGEPNPGWRISLGRAMAMYRELLVHGVPVER 203

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           + ++  FA +R +  ++       NRR+DI+++ R
Sbjct: 204 M-RVEAFADYRPRFGNETAAERRMNRRVDIVLDKR 237



 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 29/89 (32%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +         + +W + ++D MT+L+ FF+++  +   D+  K  +              
Sbjct: 3   RRKKSKEEPGIPAWMLTFSDLMTLLLTFFVLLVSMAVIDEQRKLVVLGSIVGTFGASPET 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITK 108
              +        R      D+   E +  
Sbjct: 63  ENYLARHDERKTREIGPMNDIKDLELLKP 91


>gi|260220763|emb|CBA28654.1| hypothetical protein Csp_A08220 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 182

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  +S   P++   L  I E   A +   I + GHTD +      + N  LSL RA + 
Sbjct: 81  FEPGTSTLTPDSQNQLPGILEQATARAGGDIQVVGHTDRT---GSPQANDTLSLQRAQAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             +L++ G     + +  G       + ++       NRR +I++ 
Sbjct: 138 RNLLIQRGFEPA-LVEAIGRGEREPVVPTEANVNEPRNRRAEIIIR 182


>gi|239832781|ref|ZP_04681110.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
           3301]
 gi|239825048|gb|EEQ96616.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
           3301]
          Length = 183

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 74  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 130

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 131 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 182


>gi|172064675|ref|YP_001812325.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171998160|gb|ACB69076.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 552

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSIPLPET-IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            +  +F    +   PE     L    +++  + +    I GH D+       R N  LS 
Sbjct: 437 DSLSLFASGKATFSPEAAHRELAHALQLIQANPDQRVLIEGHADSE---GSPRANILLSE 493

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA +    L   G        I G    R    +        NRR+D+ +
Sbjct: 494 ARARAIRDWLAAKGGLSVARFAIQGLGDVRPIADNSSEAGRALNRRVDVSL 544


>gi|170025766|ref|YP_001722271.1| hypothetical protein YPK_3551 [Yersinia pseudotuberculosis YPIII]
 gi|169752300|gb|ACA69818.1| type IV / VI secretion system protein, DotU family [Yersinia
           pseudotuberculosis YPIII]
          Length = 536

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506


>gi|126463345|ref|YP_001044459.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105009|gb|ABN77687.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 310

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 12/181 (6%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
              E      L   +  A    + ++ L +  +      V D  V           ++  
Sbjct: 133 EGAEGAEAVSLLISRSDATGFVQVIEALPRTAAPPAPVAVPDEPVAAEAPAPAAGTLIPR 192

Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           + +     +    F   S+         L  + + L        +  GHTDA        
Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            N  LS  RA S  + L+ + GV   +++   G  +   +  +      + NRR+++++ 
Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308

Query: 340 D 340
            
Sbjct: 309 A 309


>gi|73541910|ref|YP_296430.1| OmpA/MotB [Ralstonia eutropha JMP134]
 gi|72119323|gb|AAZ61586.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 186

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F        P+ I  ++++G VL     + + + GHTD +        N RLSL RA 
Sbjct: 81  VLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTDHT---GSTEYNLRLSLRRAE 137

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +  +VL+ +G     I ++ G    R    +      + NRR  I+V 
Sbjct: 138 AVARVLVTAGFEPANI-ELRGMGKGRPVADNRTAAGRAENRRASIVVT 184


>gi|254785076|ref|YP_003072504.1| outer membrane protein and related peptidoglycan-associated
           [Teredinibacter turnerae T7901]
 gi|237687207|gb|ACR14471.1| putative outer membrane protein and related
           peptidoglycan-associated [Teredinibacter turnerae T7901]
          Length = 472

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 13/235 (5%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
              ++K+  + +  +             + +    +  +    +          +++ L 
Sbjct: 239 EALKRKELTQEQLLLQQELPVATIAGELDLVAEFDQGSEVPVAAIINRIQQLTADSHELD 298

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGILISIIDQRNT 234
            L        +    L+      S  L               +      +++S  D    
Sbjct: 299 ELKARYAQLDQEFAALETKVGIQSERLKQEEEARERLRRVSDYFRRDEAMVLSQGDNVLI 358

Query: 235 PM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            M    FD  S+        +LQK+ + +        +  GHTD+       + N  LS 
Sbjct: 359 RMVGLNFDPGSAQVNASNYALLQKVEQAVRMYPGYTVVVEGHTDSF---GSTQANQTLSE 415

Query: 290 DRAYSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
           DRA +  Q L+ +         +  G+   +    ++       NRRID+L++  
Sbjct: 416 DRANAVRQYLLVNMNDLAAGAIEAYGYGESQPIANNETREGRKRNRRIDVLLKAP 470


>gi|194290119|ref|YP_002006026.1| outer membrane protein, ompa family [Cupriavidus taiwanensis LMG
           19424]
 gi|193223954|emb|CAQ69963.1| putative outer membrane protein, ompA family [Cupriavidus
           taiwanensis LMG 19424]
          Length = 177

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +  +   +    + +IG  L+    E + + GHTD       A  N  LS+ R
Sbjct: 70  DKVLFGFNEDLIEGDRAANVLRIGRALSGVGIERLRVDGHTDD---AGSAEYNQSLSVRR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +  ++L  +G + D I ++ G    R    +      + NRR+ I+V
Sbjct: 127 AEAVARLLADAGFTRDNI-EVRGLGKSRPVADNRTAAGRAENRRVAIIV 174


>gi|119944499|ref|YP_942179.1| OmpA domain-containing protein [Psychromonas ingrahamii 37]
 gi|119863103|gb|ABM02580.1| OmpA domain protein [Psychromonas ingrahamii 37]
          Length = 195

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 7/175 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S +  ++  +         A   K  ++  A + ++  + +  D +    L E       
Sbjct: 24  SKSYNDSAAMEANKAAMEQAAMDKAAMELAAMERAAEENKIETDGLQVVELTEEELMAQQ 83

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDN 284
            S    + T  FD  +S+  PE   +L    + L  + ++ ++I GHTD          N
Sbjct: 84  YSDAILQKTIQFDFDTSMIKPEFTSILDAHAKFLVNNPSKKVTIEGHTDEKGTPG---YN 140

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             LS  RA S    L   GV  D+I  +  +   +           + NRR +++
Sbjct: 141 IALSERRAMSVSVYLENMGVLPDQI-SVVSYGEEKPLNFGHSEASWADNRRAELV 194


>gi|255280230|ref|ZP_05344785.1| OmpA family protein [Bryantella formatexigens DSM 14469]
 gi|255269321|gb|EET62526.1| OmpA family protein [Bryantella formatexigens DSM 14469]
          Length = 319

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 110/339 (32%), Gaps = 62/339 (18%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +   +   +    W+  Y+D M  ++  F+++  ++       +A   Y           
Sbjct: 2   RRRREKDNSGFNVWR-SYSDMMAGVLLLFVLIMCVSL-----FQAQVNYEASIK------ 49

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                          +    L + +  TK  +  +    +Q+ Q    +  +   S  + 
Sbjct: 50  ---------------ERDEKLYLQDEYTKKIMSQEDQMADQQNQLASQDELLA--SQDEL 92

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               K  L   +E+        D + +    +   L   + +      +  ++  +   +
Sbjct: 93  LAAQKAQLDALAEQLATQQSQLDEQSATLASQQSALDEKTTQLADQQAQIDKIIGVKADV 152

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----- 254
              L    A+N    V  + T   +++      ++ +FD   +    E   VL       
Sbjct: 153 IEALKQEFANN-NISVEIDETTGSLVM-----DSSVLFDYDETELTEEGQEVLGNVLPIY 206

Query: 255 ----IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI- 309
               + E        I I G+TD+         N  LS  R+ +  + L+  G+S+  + 
Sbjct: 207 CSVLMQEEYFPYLAEIIIDGYTDS---SGGYEYNLELSQRRSLAVAEYLL--GISQSFLD 261

Query: 310 ----------SKISGFAHHRLK-IASDPMNS-ANRRIDI 336
                       ++G +   L    +   ++ A+RR+++
Sbjct: 262 ADDQDALKEKLTVNGHSSSNLVLNENGEEDADASRRVEV 300


>gi|166712982|ref|ZP_02244189.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 172

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168


>gi|145600375|ref|YP_001164451.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
 gi|145212071|gb|ABP41478.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
          Length = 529

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 349 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 404

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 405 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 464

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 465 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 499


>gi|108809572|ref|YP_653488.1| hypothetical protein YPA_3581 [Yersinia pestis Antiqua]
 gi|108810554|ref|YP_646321.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|150260448|ref|ZP_01917176.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
 gi|165928091|ref|ZP_02223923.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937799|ref|ZP_02226360.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008916|ref|ZP_02229814.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211978|ref|ZP_02238013.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401306|ref|ZP_02306806.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421902|ref|ZP_02313655.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426473|ref|ZP_02318226.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467268|ref|ZP_02331972.1| hypothetical protein YpesF_05092 [Yersinia pestis FV-1]
 gi|218927713|ref|YP_002345588.1| hypothetical protein YPO0514 [Yersinia pestis CO92]
 gi|229836901|ref|ZP_04457066.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
 gi|229840403|ref|ZP_04460562.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842483|ref|ZP_04462638.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900741|ref|ZP_04515865.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|270487887|ref|ZP_06204961.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294502609|ref|YP_003566671.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
 gi|108774202|gb|ABG16721.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|108781485|gb|ABG15543.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
 gi|115346324|emb|CAL19195.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
 gi|149289856|gb|EDM39933.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
 gi|165914211|gb|EDR32827.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165919952|gb|EDR37253.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992255|gb|EDR44556.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206724|gb|EDR51204.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960039|gb|EDR56060.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049331|gb|EDR60739.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054571|gb|EDR64379.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682080|gb|EEO78172.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|229690793|gb|EEO82847.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696769|gb|EEO86816.1| putative OmpA-family membrane protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705844|gb|EEO91853.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
 gi|262360640|gb|ACY57361.1| hypothetical protein YPD4_0452 [Yersinia pestis D106004]
 gi|270336391|gb|EFA47168.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294353068|gb|ADE63409.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
          Length = 536

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506


>gi|110639062|ref|YP_679271.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281743|gb|ABG59929.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 380

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 19/149 (12%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTP------------MFDKSSSIPLPETIVVLQK 254
             D +  GV     +  ++I I+                  +F +S S  LP+    L  
Sbjct: 236 KKDTLNNGVYAIQYKKPVVIEIVADTAPAYIKVDRVVLKNLLFSQSKSELLPQAAKELDM 295

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I E +   T+  +   GHTD       A+ N  LS  R       L+  G++ DRI  + 
Sbjct: 296 IAEWMNRETDVRVRFIGHTDNQ---GDAKLNVLLSEQRVSKVKAYLVSKGIAADRIETV- 351

Query: 314 GFAHHRLKIAS--DPMNSANRRIDILVED 340
           G+        +  +     NRR+++ +  
Sbjct: 352 GYGGAFPITDNAFEETRKLNRRVEMEILK 380


>gi|115526690|ref|YP_783601.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520637|gb|ABJ08621.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 165

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K  + L        +I GH D          N  L   R
Sbjct: 57  DRVFFESDQTDLSPQAIATLEKQAQWLQQYNRYAFTIEGHADER---GTREYNIALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A S    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 114 AQSVRSYLASRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRR 156


>gi|325287332|ref|YP_004263122.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324322786|gb|ADY30251.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 647

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 12/113 (10%)

Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS    E+   L K+   +L + T VI +  HTD++        N  LS  RA S 
Sbjct: 539 FDTNSSYLRVESYPDLDKVANYMLENPTVVIEVGAHTDSTE---SDTYNLWLSNRRAKST 595

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
            + L+  GV   RI+ I GF   +L          S+  ++ NRR + ++ ++
Sbjct: 596 VKYLVSKGVDASRITGI-GFGESQLLNKCKNGVKCSNEEHAVNRRSEFIIINK 647


>gi|319899363|ref|YP_004159460.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
           clarridgeiae 73]
 gi|319403331|emb|CBI76890.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
           clarridgeiae 73]
          Length = 172

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F  +SS    +   +L +  E L        +I GH D          N  L   R
Sbjct: 62  DRVFFSLNSSSIELDAEYILARQAEWLLRYPHYFVTIEGHADER---GTREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           A +    L+  GVS  R+  IS +   R           + NRR  ++V
Sbjct: 119 AVAVRDHLISLGVSSQRMKTIS-YGKERPVALCDDISCWNQNRRAVLVV 166


>gi|332877818|ref|ZP_08445556.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684113|gb|EGJ56972.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 680

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           I+     +   +   S+     + + L  +  ++  +  +   +  H D   +R     N
Sbjct: 512 ITAPVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCD---YRGRDEYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM---- 327
            RLS  RA S  + L+  GV+ DR++ I G+   R K+              +D +    
Sbjct: 569 IRLSQRRAESVVKYLIAHGVATDRLTPI-GYGETRPKVIRKRLTERYPFLHENDTLTEAF 627

Query: 328 ------------NSANRRIDILVED 340
                       N+ NRR +  V  
Sbjct: 628 IKKLPEEQQEICNALNRRTEFRVLR 652


>gi|330998288|ref|ZP_08322113.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329568677|gb|EGG50478.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 673

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           I+     +   +   S+     + + L  +  ++  +  +   +  H D   +R     N
Sbjct: 512 ITAPVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCD---YRGRDEYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM---- 327
            RLS  RA S  + L+  GV+ DR++ I G+   R K+              +D +    
Sbjct: 569 IRLSQRRAESVVKYLIAHGVATDRLTPI-GYGETRPKVIRKRLTERYPFLHENDTLTEAF 627

Query: 328 ------------NSANRRIDILVED 340
                       N+ NRR +  V  
Sbjct: 628 IKKLPEEQQEICNALNRRTEFRVLR 652


>gi|330830630|ref|YP_004393582.1| major outer membrane protein OmpAI [Aeromonas veronii B565]
 gi|328805766|gb|AEB50965.1| Major outer membrane protein OmpAI [Aeromonas veronii B565]
          Length = 339

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 79/299 (26%), Gaps = 33/299 (11%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +      N F     T + G         R + +                + +G+     
Sbjct: 51  QEDAAAANAFMGYNFTENFGTELGYQYTGRGNTDGNRYESQGATLSGIARMPVGNDFSLF 110

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                         +  ++    +          +  + DL+       +      + E+
Sbjct: 111 AEGGAYWGHTDGLGTSDTKVSPLAGAG---VTYKVNDALDLQARYRYMWDVADLHANGER 167

Query: 183 ILAMKRKKRLQDLAK-----KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
             A +    L+ +        ++   + +V +              +        +  +F
Sbjct: 168 YKANQSIATLEAVYHPFRTSYVAPVAAPVVEEAPAPAPQVVEKNFAL-------NSDVLF 220

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
                   PE +  L  + + +           + G+TD          N +LS  RA +
Sbjct: 221 AFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLSEARART 277

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDRQ 342
               L+  G++  ++  I G         +        +        +RR+++ V   Q
Sbjct: 278 VANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGVQ 335


>gi|254496705|ref|ZP_05109568.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354133|gb|EET12805.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 293

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVISIR 269
                ++     +L    D+    +F     S     E    L++I + +A   ++  IR
Sbjct: 162 KPYSRYQQCVGNLLPFGYDRVKESVFHFGPDSRELTDEDKAQLRRIAQYVAADMQIKVIR 221

Query: 270 --GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
             G+ D S  +     N  +S DRA      L+  GV E+++  ++ F   +    +D  
Sbjct: 222 VVGYADESGRKG---YNNAISQDRAQVVQNYLITLGVPEEQL-SVTWFGALKPVARNDTD 277

Query: 327 -MNSANRRIDILVEDR 341
              + NRR+ I +  +
Sbjct: 278 AGRALNRRVVISLIKK 293


>gi|184159409|ref|YP_001847748.1| outer membrane protein [Acinetobacter baumannii ACICU]
 gi|332876249|ref|ZP_08444024.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
 gi|183211003|gb|ACC58401.1| Outer membrane protein [Acinetobacter baumannii ACICU]
 gi|322509321|gb|ADX04775.1| Outer membrane protein omp38 precursor [Acinetobacter baumannii
           1656-2]
 gi|323519348|gb|ADX93729.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332735521|gb|EGJ66573.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
          Length = 356

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    +        NRR+   +   +
Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339


>gi|167578218|ref|ZP_02371092.1| OmpA family domain protein [Burkholderia thailandensis TXDOH]
          Length = 333

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE+   L ++ ++L  +    + I GHTD          N  LS  RA + 
Sbjct: 231 FDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQ---GQFAHNVDLSQKRADAV 287

Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            Q L     ++  R+    G A      ++  +   + NRR++++
Sbjct: 288 AQTLATTYRIAPGRLVA-KGVASLSPVASNGDEAGRAQNRRVELV 331


>gi|223038721|ref|ZP_03609014.1| Omp18 [Campylobacter rectus RM3267]
 gi|222880123|gb|EEF15211.1| Omp18 [Campylobacter rectus RM3267]
          Length = 189

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 9/151 (5%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++     +  +     +    +        ++ SI  Q  T  FD        +   V+ 
Sbjct: 42  EVDMSADANQNMGNMGSSDNMMSDSERLQQLISSIEGQVQTVYFDFDKFNIKGDMQPVIN 101

Query: 254 KIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
               +   S      + I G+ D          N+ L L RA +A   L+K GV+ DRI 
Sbjct: 102 TNAGLFNQSEAQALSVKIEGNCDEW---GTDEYNYALGLKRAKAAKDALVKQGVAADRIM 158

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVE 339
            +S +               + NRR +  V 
Sbjct: 159 VVS-YGESNPVCTDKTKACDAQNRRAEFKVL 188


>gi|254457162|ref|ZP_05070590.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
 gi|207085954|gb|EDZ63238.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
          Length = 195

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 9/149 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQ 253
                  +S L    I+     +     +L  +    +     F   SS    E+I  ++
Sbjct: 51  KAWQKVEISNLDKKEILSKESVQNEYKTLLDEMPKEAKNYRLYFKFDSSDMTSESIATIE 110

Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           KI + +  +    I + G+TD       A  N  LS+ RA +  +VL  +GV+  +I  +
Sbjct: 111 KIIKDIEANNILQIDVIGYTDR---AGKAAYNKVLSMKRAKNVIKVLTDNGVN-SKIISL 166

Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVE 339
             +      I +D   +   NRR++I ++
Sbjct: 167 DYYGEANPIIETDDGVAKKRNRRVEITLK 195


>gi|163787037|ref|ZP_02181484.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
 gi|159876925|gb|EDP70982.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
          Length = 531

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S   PE ++ L+++ + ++   +  + I GHTD       + +N  LSL 
Sbjct: 422 DSKVLFDSGKSELKPEGLLALKELAKNISVLKSGNVIIEGHTDDV---GSSENNKNLSLA 478

Query: 291 RAYSAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA S    L K  +       +  G+   +  + ++     + NRR++IL+ 
Sbjct: 479 RAKSVSTELKKL-IPSKTFKWREKGYGEKKPLVENNSEKNRTKNRRVEILIL 529


>gi|157960967|ref|YP_001501001.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845967|gb|ABV86466.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 198

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  + +  LP     ++ I   L  +   I + GHTD+      A  N +LSL RA    
Sbjct: 95  FGFAQADILPSQEQTIEVIARWLKSTRVSIQLVGHTDSI---GDASFNLQLSLKRAEQVK 151

Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +V ++  G + DR  +I+G         +        NRR++ LV
Sbjct: 152 KVFVEQFGFAADRF-QINGVGSSLPVANNQTAFGREQNRRVEFLV 195


>gi|37704644|gb|AAR01594.1| OprF [Pseudomonas sp. MFY107]
          Length = 316

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316


>gi|53802737|ref|YP_115490.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
 gi|4104020|gb|AAD01925.1| MopB [Methylococcus capsulatus]
 gi|53756498|gb|AAU90789.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
          Length = 348

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTD 273
             ++    I I +        F   S+        +L +  E L    E   I   GHT 
Sbjct: 228 KVDSDGCLIRIELHGVN----FKYDSAELTDSAKRILDETAENLILFPEKRDIEVAGHTS 283

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
                     N RLS+ RA+S    L   GV         G+      +          N
Sbjct: 284 TE---GTNEYNMRLSIRRAHSVADYLKAKGV--TNQLYPKGYGEEYPLVPEHSEADREKN 338

Query: 332 RRIDIL 337
           RR++++
Sbjct: 339 RRVELI 344


>gi|312795445|ref|YP_004028367.1| outer membrane protein [Burkholderia rhizoxinica HKI 454]
 gi|312167220|emb|CBW74223.1| Outer membrane protein [Burkholderia rhizoxinica HKI 454]
          Length = 243

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L  +   +      + +  G+TD        + N  LSL RA +
Sbjct: 104 LFDFDKAVLKPAGKEKLDDLASKIQDLNLEVVVATGYTDKI---GSDKYNDHLSLRRAQA 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN-------SANRRIDILVEDRQ 342
               L+   +  +RI    G       +   +           + NRR+++ V   +
Sbjct: 161 VKAYLVSKDIPANRIYT-EGKGKRNPVVTDCNQKNRKALIACLAPNRRVEVEVVGTK 216


>gi|312132093|ref|YP_003999433.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311908639|gb|ADQ19080.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 165

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIP--LPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S      P+    L      L  +     +  GHTD          N  LSL+R  
Sbjct: 60  FQSASLEIIRTPQLEEWLSLAKNYLEENPGERLVLTGHTDNE---GTEESNLNLSLERGN 116

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
              ++L   G S + + ++ G         +D       NRR+ I +  R
Sbjct: 117 RVKEILSAEGFSAESL-EVEGKGQSEPIAGNDTPEGMQKNRRVSIRLLKR 165


>gi|270261236|ref|ZP_06189509.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
 gi|270044720|gb|EFA17811.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
          Length = 359

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 27/135 (20%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   P+    L ++   L+        + + G+TDA       + N +LS
Sbjct: 229 KSDVLFNFNKATLKPQGQQALDQLYSQLSSMDPKDGSVVVLGYTDAV---GSDQYNQKLS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMN-----SANRRID 335
             RA S    L+  G+  D+IS   G         +                 + +RR++
Sbjct: 286 EKRAQSVVDYLVSKGIPSDKISA-RGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVE 344

Query: 336 I-------LVEDRQG 343
           I       +V   QG
Sbjct: 345 IEVKGIKDVVTQPQG 359


>gi|288957826|ref|YP_003448167.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
 gi|288910134|dbj|BAI71623.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
          Length = 155

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F        PE    L +  + L       +++ GH D          N  L   R
Sbjct: 50  DRVFFGLDRFDLSPEARATLDRQAKWLQTYGSVTVTVEGHADER---GTREYNLALGERR 106

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A S    L   G+   R++ +S +   R     +++   S NRR
Sbjct: 107 ANSVKNYLAAKGIPASRVNVVS-YGKERPAVVGSNEAAWSQNRR 149


>gi|269963652|ref|ZP_06177975.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831665|gb|EEZ85801.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 218

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 10/157 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +    + KK+    S  +  N  +      +   +++ + +Q +   F   S+    ++
Sbjct: 69  AQAPSAMGKKLQGVTSLEMFLNRHQIAHETISGDHLMVRLKEQVH---FQTGSARLSSQS 125

Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              L+ +G  LA  T+V  +  GH D++     A  N  LS  RA    + L+ + +   
Sbjct: 126 EDWLRNLGHYLAGRTDVDVVIDGHADST---GAATFNDSLSEKRAREVEKQLLATSLPRQ 182

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           R+    GF  +  + ++   +    NRR+++++   Q
Sbjct: 183 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLIVDQ 218


>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
 gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
          Length = 353

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 225 RSDVLFNFNKASLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRI---GSQNYNLPLS 281

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  GV    I    G         +               + +RR++I 
Sbjct: 282 QKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIE 340

Query: 338 VED 340
           ++ 
Sbjct: 341 IQG 343


>gi|197119091|ref|YP_002139518.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
 gi|197088451|gb|ACH39722.1| OmpA family outer membrane protein, DUF11 domain-containing protein
            [Geobacter bemidjiensis Bem]
          Length = 2000

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 235  PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
              F    S    E   +L+    VL    +    + GHTD          N  LS  R  
Sbjct: 1729 GAFVFDRSELTLEAKHLLKGAARVLRARPQEKVIVEGHTDGI---GSVEYNMALSQRRCD 1785

Query: 294  SAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            +A   L+ + G++  R+ +   +   R    +   P    NRR+++
Sbjct: 1786 AAADYLVREEGIAGSRLLR-RWYGKSRPVADNVTTPGRRLNRRVEL 1830


>gi|189426515|ref|YP_001953692.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
 gi|189422774|gb|ACD97172.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
          Length = 188

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 14/174 (8%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            +E          +   +K+++ ++ +                            + +  
Sbjct: 23  AKEEVVKKDEPVVEQQTVKQQEPVKPVEVPKQEEPKQEAPKQEEATATAAKASEAVALE- 81

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286
                T  FD   S    +    L K  E L    +   I I GH D          N  
Sbjct: 82  -----TVYFDFDKSDLRQDARDALSKNAEALLKKVADAKIKIEGHCDER---GSDEYNLA 133

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           L   RA S  + L   GV  DRIS IS +   +  +  + +   S NRR + ++
Sbjct: 134 LGDRRAKSVAKYLTTLGVKADRISTIS-YGKEKPAVQGSDEAAWSKNRRAEFVI 186


>gi|153832375|ref|ZP_01985042.1| outer membrane protein [Vibrio harveyi HY01]
 gi|148871404|gb|EDL70267.1| outer membrane protein [Vibrio harveyi HY01]
          Length = 284

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 8/250 (3%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             +           + ++    +     + L        + Q ++   ++L ++  +   
Sbjct: 26  PDNGKGGMAENYQDISIENYQFSPVMPDEPLGPEHGLRFDWQLTKLHLDALIQEGARWCF 85

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                   +  N+        L  +    +  ++R  +  +     +         + + 
Sbjct: 86  PAAVVQALEKQNRIARELEGGLLLDAANDIVIQRRRLNQLELQLDYVLSQTTCKPPQDIE 145

Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
              +   I+ +I D  N    F   S+   P+ +  L +   +L       + + GH DA
Sbjct: 146 ALRSDLNIVANIYDLLNVDNQFAVDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADA 205

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N +L+ DRA    + L   G++ DR+                       NR
Sbjct: 206 T---GTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQT-KSVGETLPLYDGQTPAVRLTNR 261

Query: 333 RIDILVEDRQ 342
           R+ I V + +
Sbjct: 262 RVSIEVLNAK 271


>gi|162418688|ref|YP_001607328.1| hypothetical protein YpAngola_A2952 [Yersinia pestis Angola]
 gi|162351503|gb|ABX85451.1| OmpA domain protein [Yersinia pestis Angola]
          Length = 535

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 355 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 410

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 411 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 470

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 471 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 505


>gi|51595006|ref|YP_069197.1| hypothetical protein YPTB0655 [Yersinia pseudotuberculosis IP
           32953]
 gi|153950101|ref|YP_001402377.1| hypothetical protein YpsIP31758_3422 [Yersinia pseudotuberculosis
           IP 31758]
 gi|186894007|ref|YP_001871119.1| hypothetical protein YPTS_0678 [Yersinia pseudotuberculosis PB1/+]
 gi|51588288|emb|CAH19895.1| putative OmpA-family membrane protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|152961596|gb|ABS49057.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
 gi|186697033|gb|ACC87662.1| type IV / VI secretion system protein, DotU family [Yersinia
           pseudotuberculosis PB1/+]
          Length = 536

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506


>gi|328542425|ref|YP_004302534.1| outer membrane lipoprotein [polymorphum gilvum SL003B-26A1]
 gi|326412172|gb|ADZ69235.1| Probable outer membrane lipoprotein [Polymorphum gilvum
           SL003B-26A1]
          Length = 155

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               FD+ S+       + + K    L  +    + I+GH D          N  LS  R
Sbjct: 41  RRIFFDRGSAELTETARMTIDKQAAWLRANPRWLVKIQGHADD---PGSEAANKALSTKR 97

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
           A +    L+  GV   R+  I G+   R     D    +  NRR+ + + +
Sbjct: 98  AEAVRDALVALGVDGKRMW-IKGYGIERPVTDCDELTCHVQNRRVVVNLRE 147


>gi|269962741|ref|ZP_06177084.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832543|gb|EEZ86659.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 282

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           +++RL  L +++   LS        + +    +   I+  I D  N    F   S+   P
Sbjct: 118 QRRRLNQLEQQLDYVLSQ-TTCKPPQDIEALRSDLNIVADIYDLLNVDNQFAVDSAEINP 176

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L +   +L       + + GH DA+        N +L+ DRA    + L   G++
Sbjct: 177 KYMGHLAEAAYILRDHPSLSLVVTGHADAT---GTPEYNQKLAQDRAEQVKRYLNVFGIT 233

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            DR+                       NRR+ I V +  
Sbjct: 234 SDRVQT-KSVGETLPLYEGQTPAVRLTNRRVSIEVLNAN 271


>gi|92115867|ref|YP_575596.1| OmpA/MotB [Nitrobacter hamburgensis X14]
 gi|91798761|gb|ABE61136.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 334

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 6/151 (3%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K L +    +   +     +  +  V  +     I  +         FD + +   PE+ 
Sbjct: 184 KALNERTVALVHIVEPKPREQKMVVVKADEMARSIGATGRIALYGIFFDTAKADLKPESN 243

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L +I  +L       + I GHTD          N  LS  RA +  + L  +   E R
Sbjct: 244 PTLAEIAGLLNADPKLAVLIVGHTDNQ---GAFDYNLDLSRRRAEAVVKTLAANFRVEPR 300

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             + +G        ++D     + NRR++++
Sbjct: 301 RLRAAGVGMMAPAASNDAEDGRAKNRRVEVV 331


>gi|330830616|ref|YP_004393568.1| putative porin [Aeromonas veronii B565]
 gi|328805752|gb|AEB50951.1| putative porin [Aeromonas veronii B565]
          Length = 512

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 20/162 (12%)

Query: 189 KKRLQDLAKKISSTLSGLVADNI----VKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           + RLQ+L +        +  + +       V       G++  I D     MF   S+  
Sbjct: 84  QSRLQELDRIAKEENLNIATEKLTVAEPSAVTGVPQDAGLVAQIPDS---GMFAIGSAQL 140

Query: 245 LPETIVVLQKIGEVLAH-------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
               + V+ K+ ++ +        +   I + GH+DA+     A  N RLS  RA +  +
Sbjct: 141 TESGLRVVTKLAQLYSKPAAADASNARRILLVGHSDAT---GPAELNLRLSEQRARAVGK 197

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           +L+ SG+         G    R    +        NRR++I+
Sbjct: 198 ILVASGIPAS-FIYYQGAGSSRPIADNSDPLLRGQNRRVEIV 238


>gi|83716533|ref|YP_439774.1| OmpA family domain-containing protein [Burkholderia thailandensis
           E264]
 gi|167616356|ref|ZP_02384990.1| OmpA family domain protein [Burkholderia thailandensis Bt4]
 gi|257142917|ref|ZP_05591179.1| OmpA family domain-containing protein [Burkholderia thailandensis
           E264]
 gi|83650358|gb|ABC34422.1| OmpA family domain protein [Burkholderia thailandensis E264]
          Length = 333

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE+   L ++ ++L  +    + I GHTD          N  LS  RA + 
Sbjct: 231 FDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQ---GQFAHNVDLSQKRADAV 287

Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            Q L     ++  R+    G A      ++  +   + NRR++++
Sbjct: 288 AQTLATTYRIAPGRLVA-KGVASLSPVASNGDEAGRAQNRRVELV 331


>gi|332300756|ref|YP_004442677.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177819|gb|AEE13509.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 147

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
            +    N   F K  +    E  +VL  + + +   +   + + GHT           N 
Sbjct: 39  ELEQNFNDVKFAKGKADLTREAQLVLCDLAKFMESHSGLKLKLEGHTSEE---GDETFNQ 95

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RLS  RA +A   L+  GVS +R+    G                NRR + +V
Sbjct: 96  RLSEARAQAAVDFLISQGVSAERLEA-EGKGSTDPIDPDSLE--VNRRTEFVV 145


>gi|306844687|ref|ZP_07477272.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
 gi|306274859|gb|EFM56629.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
          Length = 168

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L K  + L    +  I+I GH D          N  L   R
Sbjct: 59  DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L   GV  +R+  IS + + R      +D   S NRR  + V +  G
Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 167


>gi|258624563|ref|ZP_05719502.1| outer membrane protein, putative [Vibrio mimicus VM603]
 gi|262165799|ref|ZP_06033536.1| outer membrane protein [Vibrio mimicus VM223]
 gi|262171367|ref|ZP_06039045.1| outer membrane protein [Vibrio mimicus MB-451]
 gi|258583156|gb|EEW07966.1| outer membrane protein, putative [Vibrio mimicus VM603]
 gi|261892443|gb|EEY38429.1| outer membrane protein [Vibrio mimicus MB-451]
 gi|262025515|gb|EEY44183.1| outer membrane protein [Vibrio mimicus VM223]
          Length = 212

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 7/179 (3%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            +   +              +   L+D           L  D      +        + S
Sbjct: 24  GEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINARDLCPDTPRGSEIDNDGCGTFIKS 83

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
              Q+   +F   SS+  P  +  ++++ E L       I ++G+         A  N  
Sbjct: 84  SQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV---GRAEYNLA 140

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           LS  R+ +    L++ GV+ +R++ I G+    L      D  ++ NRR+   V   +G
Sbjct: 141 LSKQRSETVRDQLIRYGVAPNRVN-IVGYGDSVLVAEGEDDISHARNRRVTATVVGYKG 198


>gi|258545330|ref|ZP_05705564.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
 gi|258519433|gb|EEV88292.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
          Length = 244

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           ++  +FD   ++  P     L  I + L    E +  + G TD        + N +LS  
Sbjct: 128 QSEVLFDVDKAVIKPNFYQPLGSIAQTLQQYPETVVHVYGFTD---GSGSPQHNLQLSQR 184

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           RA S  Q L + G++  R   + G+        ++P +   RR+ I ++ 
Sbjct: 185 RAQSVAQYLAQQGINSQRFV-VQGYGEQYASAENNPQD---RRVAIYIKA 230


>gi|163800343|ref|ZP_02194244.1| putative protein F-related protein [Vibrio sp. AND4]
 gi|159175786|gb|EDP60580.1| putative protein F-related protein [Vibrio sp. AND4]
          Length = 209

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           +    + KK    +S     N  +          +++ + +Q +   F   SS    ++ 
Sbjct: 61  QAQNSMEKKSDGMMSLERFLNRHQIAHETINGEHLMVRLKEQVH---FQTGSSRLSAQSQ 117

Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +Q +G  LA  T++  +  GH D+      A  N  LS  RA    + L+++ +   R
Sbjct: 118 GWIQSLGHYLAKRTDIDVVVNGHADS---AGAASFNDSLSEKRAREVEKQLLETSLPRQR 174

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +    GF  +  + ++   +    NRR+++++
Sbjct: 175 VFS-RGFGEYVPQCSNATASGKACNRRVELML 205


>gi|254251106|ref|ZP_04944424.1| Outer membrane protein [Burkholderia dolosa AUO158]
 gi|124893715|gb|EAY67595.1| Outer membrane protein [Burkholderia dolosa AUO158]
          Length = 557

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARD 283
           ++ +   + P+F +  +          L  +   +L +    + I GH D+         
Sbjct: 437 VTTLQLDSLPLFARGKATFSAARARRELAHVLRLILQNPDHRVLIEGHADSE---GSPDA 493

Query: 284 NWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           N+RLS  RA +    L ++ G+   RI  I G    R    +        NRR+D+ +  
Sbjct: 494 NFRLSEARARAIRDWLVVEGGLPITRI-AIQGMGDLRPIGDNATEAGRALNRRVDVSLIP 552

Query: 341 R 341
            
Sbjct: 553 D 553


>gi|84501653|ref|ZP_00999825.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
           HTCC2597]
 gi|84390274|gb|EAQ02833.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
           HTCC2597]
          Length = 171

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E    L    + L  +++  ++  GH D          N  L   R
Sbjct: 61  DRVLFAVDQSTLSDEARATLNAQAQWLMTNSDYTAVIEGHADEQ---GTREYNLALGARR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A + L+  GV+  R+  ++ +   R     +++   + NRR
Sbjct: 118 ANAAREYLITQGVAASRLKTVT-YGKERPIEICSTESCYAKNRR 160


>gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|332300857|ref|YP_004442778.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177920|gb|AEE13610.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 665

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 34/139 (24%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           +Q +   +D   +   PE    L  +  +L  + +V   +  HTD    +     N +LS
Sbjct: 529 EQIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPDVRLELSSHTDR---KGSQAYNQKLS 585

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA------------------ 330
             RA S    L+  G++ DR+    G+   R  + +  M +                   
Sbjct: 586 QRRAQSVVDYLIAKGIAADRLEA-RGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTL 644

Query: 331 -----------NRRIDILV 338
                      NRR +  V
Sbjct: 645 TEEQQIVCDQLNRRTEFTV 663


>gi|121608000|ref|YP_995807.1| OmpA domain-containing protein [Verminephrobacter eiseniae EF01-2]
 gi|121552640|gb|ABM56789.1| OmpA domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 182

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  S +  PE   +++     +   +   + + GHTD          N  L   R
Sbjct: 77  RIVYFDYDSYVIKPEFQTLIEAHSRFIKTDTKRKLMLEGHTDER---GGREYNLSLGQKR 133

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           A +  + L   GV + ++  +S F   +L +        + NRR+++ 
Sbjct: 134 AEAVRRALGLLGVPDSQMEAVS-FGKEKLAVQGHTEEAHAQNRRVEMT 180


>gi|315223626|ref|ZP_07865480.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
 gi|314946407|gb|EFS98402.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
          Length = 652

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD + S   P+  V L KI EV+    ++   IR HTD+         N  LS 
Sbjct: 537 EIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSR---ATDAYNLALSD 593

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            RA +  + ++K G+   R+    G+   +L          ++  + ANRR + +V  
Sbjct: 594 RRAKATLEWIVKQGIDRKRLKA-KGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 650


>gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis]
 gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis]
          Length = 367

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis]
 gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis]
 gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis]
 gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis]
 gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis]
 gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis]
 gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis]
 gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis]
 gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|256820526|ref|YP_003141805.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582109|gb|ACU93244.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 650

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD + S   P+  V L KI EV+    ++   IR HTD+         N  LS 
Sbjct: 535 EIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSR---ATDAYNLALSD 591

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            RA +  + ++K G+   R+    G+   +L          ++  + ANRR + +V  
Sbjct: 592 RRAKATLEWIVKQGIDRKRLKA-KGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 648


>gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis]
 gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|218709383|ref|YP_002417004.1| putative outer membrane protein [Vibrio splendidus LGP32]
 gi|218322402|emb|CAV18555.1| putative outer membrane protein [Vibrio splendidus LGP32]
          Length = 204

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
           S  ++    +F   S+   P  +  ++++   L       I ++G+         A  N 
Sbjct: 76  SSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKV---GNAEYNL 132

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVEDRQG 343
           +LS +RA +  + L+ +G+   R+  + G+         ++  ++ NR++   V   +G
Sbjct: 133 KLSEERAVNVRRALISNGIPPSRVYTV-GYGDAGFLDNDTETNHALNRKVVASVVGFKG 190


>gi|253700147|ref|YP_003021336.1| hypothetical protein GM21_1522 [Geobacter sp. M21]
 gi|251774997|gb|ACT17578.1| conserved repeat domain protein [Geobacter sp. M21]
          Length = 1984

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 235  PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F    S    E   +L+    VL     E + + GHTD          N  LS  R  
Sbjct: 1713 GAFVFDRSELTLEAKRLLKGAARVLRARPREKVIVEGHTDGI---GSVEYNMALSQRRCD 1769

Query: 294  SAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            +A   L+ + G++  R+ +   +   R    +   P    NRR+++
Sbjct: 1770 AAADYLVREEGIARSRLLR-RWYGKSRPVADNVTSPGRRMNRRVEL 1814


>gi|320156464|ref|YP_004188843.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
 gi|319931776|gb|ADV86640.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
          Length = 280

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246
           ++KRL  L +++   LS        +       +  I+  + D  N    F  +S+   P
Sbjct: 115 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 173

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  L K   +L   T   +++ GH DA+        N +L++DRA    + L   G+ 
Sbjct: 174 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 230

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            +RI+  S           +       NRR+ I ++  
Sbjct: 231 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 267


>gi|228018149|gb|ACP52753.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018157|gb|ACP52757.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018163|gb|ACP52760.1| fibronectin-binding protein [Campylobacter jejuni]
          Length = 211

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 179

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
              L K GV + RI  + G+     + ++D   
Sbjct: 180 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKE 211


>gi|288940835|ref|YP_003443075.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288896207|gb|ADC62043.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 351

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 13/163 (7%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                         +A  +   LS  + + +V  +  +    G+  +     +   FD  
Sbjct: 194 ALQDNFADSAAGNRVAIFVEEVLSQPMRERMVS-IEAKEMAQGLSDAGRIAVHGIQFDFD 252

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            +    E+   L++I  +L  + +  + I GHTD          N  LS  RA    + L
Sbjct: 253 QATIKDESKPQLEQIALMLVENPDLKLYIVGHTDNR---GTLEYNMDLSRRRAEEVVRTL 309

Query: 300 M-KSGVSEDRISK--ISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +   G+  +R+    ++G A      ++        NRR++I+
Sbjct: 310 IQSYGILGERLKPMGVAGLA---PLTSNATEAGRALNRRVEIV 349


>gi|86131405|ref|ZP_01050003.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85817850|gb|EAQ39018.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 568

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 12/114 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N  ++D       P+    L ++ + +  +  +   +  HTD+         N  LS +R
Sbjct: 456 NNILYDLDKYDIRPDARPELNRLAQFMKDNPGIRVEVSSHTDSR---ASDSYNQTLSQNR 512

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           A +A   ++  GVS  +I    G+   RL          S+  +  NRR ++ V
Sbjct: 513 ANAAVDYVVSQGVSRSKI-TGKGYGESRLLNECADGVSCSETKHQINRRTEMKV 565


>gi|37704602|gb|AAR01573.1| OprF [Pseudomonas sp. MFY31]
          Length = 316

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316


>gi|88800697|ref|ZP_01116256.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Reinekea sp. MED297]
 gi|88776561|gb|EAR07777.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Reinekea sp. MED297]
          Length = 294

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLS 288
           +++T  FD             L  I   L        I + GH+D+        DN RLS
Sbjct: 167 RQSTVRFDGGGDGLDARARSQLDDIVTYLKADPLITAIYVDGHSDSV---GTRYDNRRLS 223

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
             RAY     L+ +G+    I             +++     + NRR+
Sbjct: 224 ERRAYRVTDYLVNAGIDAAMILT-RYHGERYPIASNETAAGRAQNRRV 270


>gi|84515818|ref|ZP_01003179.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
 gi|84510260|gb|EAQ06716.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
          Length = 637

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 78/297 (26%), Gaps = 11/297 (3%)

Query: 49  LVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
           +++  +  T+               P    L      + D+Q          +       
Sbjct: 307 VILVALPGTEQGIFDNAIGELENSLPDVFALTAELPKLPDDQAAGPPQFTATLSPEGHVQ 366

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           +     D       +     +       +      +       R     + L + ++   
Sbjct: 367 LRGRMPDDLTNMVAENFATAKFGQRNITMRTRVVDDLPVGWSVRVLAGIEALSELSNGIV 426

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224
            +  +          E   A   +  +  L +     L     + +       T    I 
Sbjct: 427 VVEPQTITVRGNTGNETATAEISRLMIDKLGQSADFDLDIGYVEALDPIAALPTPDQCIA 486

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            I  +       FD  S+        V+  I EVL    +  I + G+TD+         
Sbjct: 487 QIIAMTDGRKITFDPGSASITAAAQPVIDDIAEVLRLCGDLRIRVAGYTDSQ---GREAM 543

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N RLS DRA +    L    V       + G+        +        NRRI+  +
Sbjct: 544 NLRLSQDRADAVLTALRARRVPVSTFEAV-GYGIADPIADNATEAGREANRRIEFSL 599


>gi|328542545|ref|YP_004302654.1| Omp16 protein [polymorphum gilvum SL003B-26A1]
 gi|326412291|gb|ADZ69354.1| Omp16 protein [Polymorphum gilvum SL003B-26A1]
          Length = 161

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 12/143 (8%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS- 262
           +    D +   V   + +  ++       +   F +  S    +    L K  + L    
Sbjct: 27  AQTKPDGLDGNVTPGSGQDFVVNV----GDRVFFAEDQSTLSTQARATLDKQAQWLNLYS 82

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I++ GH D          N  L   RA SA   L+  GV+  RI  IS +   R   
Sbjct: 83  RYTITLEGHADER---GTREYNIALGARRANSARDYLVSRGVAASRIRTIS-YGKERPVA 138

Query: 323 --ASDPMNSANRRIDILVEDRQG 343
               D   S NRR  + V +  G
Sbjct: 139 VCNDDSCWSQNRRA-VTVLNNAG 160


>gi|228018139|gb|ACP52748.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018141|gb|ACP52749.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018143|gb|ACP52750.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018145|gb|ACP52751.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018147|gb|ACP52752.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018151|gb|ACP52754.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018153|gb|ACP52755.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018155|gb|ACP52756.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018159|gb|ACP52758.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018161|gb|ACP52759.1| fibronectin-binding protein [Campylobacter jejuni]
 gi|228018165|gb|ACP52761.1| fibronectin-binding protein [Campylobacter jejuni]
          Length = 211

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 179

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
              L K GV + RI  + G+     + ++D   
Sbjct: 180 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKE 211


>gi|148976136|ref|ZP_01812879.1| outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145964531|gb|EDK29785.1| outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 277

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 72/207 (34%), Gaps = 11/207 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198
            K  L    ++G   C    + ++I K+            + A      ++KRL +L  +
Sbjct: 66  AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELELQ 125

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    S    +       F    + I            F  +S    P+ +  L +   +
Sbjct: 126 LDYVTSQARCEPPKNENQFRMQLSIIQQLYDLLNVDNQFAHNSIEVNPKYMGKLAEASYI 185

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  +    + + GH+DA+        N +L+L RA    + L   G+S  RI  +S    
Sbjct: 186 LKDNKSLELIVTGHSDAT---GSEEYNDKLALGRAQQVERYLTIFGLSPSRIKAVS-VGE 241

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +   NRR+ I V   +
Sbjct: 242 TVPLFEGESEGTRLTNRRVSIEVISPE 268


>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum]
          Length = 319

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 18/116 (15%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            + S   PE    L ++   L++       + + G TD          N  LS  RA S 
Sbjct: 204 FNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLSEKRAQSV 260

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDILVED 340
              L+  G+  D+IS   G         +      P  +       +RR++I V+ 
Sbjct: 261 VDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKG 315


>gi|22127533|ref|NP_670956.1| hypothetical protein y3659 [Yersinia pestis KIM 10]
 gi|45443397|ref|NP_994936.1| hypothetical protein YP_3665 [Yersinia pestis biovar Microtus str.
           91001]
 gi|21960635|gb|AAM87207.1|AE013969_3 hypothetical [Yersinia pestis KIM 10]
 gi|45438266|gb|AAS63813.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 545

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250
           +     I  TL   +++ + +G L         +LI   D      F    +    E I 
Sbjct: 365 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 420

Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306
              ++++G  LA     I + GHTD  PFR+    +N +LS  RA      L   + ++E
Sbjct: 421 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 480

Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R     G         +        NRR+DIL
Sbjct: 481 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 515


>gi|156974515|ref|YP_001445422.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
 gi|156526109|gb|ABU71195.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
          Length = 284

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 8/250 (3%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
             +           + ++    +     + L        + Q ++    +L ++  +   
Sbjct: 26  PDNGKGGMAENYQDISIENYQFSPVMPDEPLGPEHGLRFDWQLTKLHLEALIQEGARWCF 85

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                   +  N+        L  +    +  ++R  +  +     +         + + 
Sbjct: 86  PAAVVQALEKQNRIARELEGGLLLDAANDIVIQRRRLNQLELQLDYVLSQTTCKPPQDIE 145

Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
              +   I+ +I D  N    F   S+   P+ +  L +   +L       + + GH DA
Sbjct: 146 ALRSDLNIVANIYDLLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADA 205

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N +L+ DRA    + L   G++ DR+                       NR
Sbjct: 206 T---GTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQT-KSVGETLPLYDGQTPAVRLTNR 261

Query: 333 RIDILVEDRQ 342
           R+ I V + +
Sbjct: 262 RVSIEVLNAR 271


>gi|258621934|ref|ZP_05716964.1| outer membrane protein, putative [Vibrio mimicus VM573]
 gi|258585872|gb|EEW10591.1| outer membrane protein, putative [Vibrio mimicus VM573]
          Length = 212

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 7/189 (3%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             S+    +  +   +              +   L+D           L  D      + 
Sbjct: 14  TASSSSFANQGEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINARDLCPDTPRGSEID 73

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASP 276
                  + S   Q+   +F   SS+  P  +  ++++ E L       I ++G+     
Sbjct: 74  NDGCGTFIKSSQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV- 132

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334
               A  N  LS  R+ +    L++ GV+ +R++ I G+    L      D  ++ NRR+
Sbjct: 133 --GRAEYNLALSKQRSETVRDQLIRYGVAPNRVN-IVGYGDSVLVAEGEDDISHARNRRV 189

Query: 335 DILVEDRQG 343
              V   +G
Sbjct: 190 TATVVGYKG 198


>gi|110598626|ref|ZP_01386892.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
 gi|110339738|gb|EAT58247.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
          Length = 150

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD   S    + +  L+   + L  +     +  GH D       A  N  L   R
Sbjct: 45  GDVFFDFDKSDIRTDAVDQLKTNAQWLQANPSQKVVVEGHCDNR---GTAEYNLALGERR 101

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +A   ++  G    R+  +S +   R     +     + NRR
Sbjct: 102 AAAARDFVVNLGTDAARVKTVS-YGEERPFAQGNTEEAWAQNRR 144


>gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKPLIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|294085867|ref|YP_003552627.1| peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665442|gb|ADE40543.1| Peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 186

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           NT  FD  S++   +  V L +    L  + E + +  GH D          N  L   R
Sbjct: 81  NTVYFDFDSAVLSYDAQVTLSRQSAFLQLNPEAVVVIEGHCDER---GTREYNLALGDRR 137

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A   L+  G+   RI  +S +   R     +++   + NRR
Sbjct: 138 ASAARDFLLAKGIDAARIRTVS-YGKERPAMLGSNEESWAKNRR 180


>gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|296126061|ref|YP_003633313.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
 gi|296017877|gb|ADG71114.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
          Length = 266

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 18/176 (10%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                  +    R   + + I   ++ L A+   K V  E    G +IS+   +    F+
Sbjct: 86  GGANADTLPSTDRGYSMGRSIDKAVAVLEAEIKSKKVRVEEDERGFVISLGADQY---FE 142

Query: 239 KSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPF------RNIARDNWRLSLD 290
            +S+        +    K+  +L+     I I GHTD+              +NW LS  
Sbjct: 143 SASTNIIDSQNNVETFIKLASLLSGIPNEIRIEGHTDSGSIIPGSITEQKFGNNWGLSSA 202

Query: 291 RAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
           RA    + L      + +  ++   I+G+A  R   ++D     + NRR+DI++  
Sbjct: 203 RAMVILEKLFENDQTAKLDRNK-YSIAGYADTRPVASNDLPDGRALNRRVDIVIVR 257



 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWI-IN-ATDDDTKKAIEQYFNPFGKNLMTA 79
             D    +   W   Y DF+T+++ FF+++   ++ + +D   + I   F      +   
Sbjct: 16  KADTPGPSAPLWLQTYGDFVTLVLTFFVMLLATMSTSVNDSAIQLIATAFQGSFGVMPGG 75

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +     +      ++           + ++
Sbjct: 76  ATLSQSKLVYGGANADTLPSTDRGYSMGRS 105


>gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis]
 gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis]
          Length = 365

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P +   L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357

Query: 339 EDRQ 342
           +  +
Sbjct: 358 QGSK 361


>gi|313676000|ref|YP_004053996.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312942698|gb|ADR21888.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 228

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           +    I+      V +++ + V          I  +D      F +S +  L  +   L 
Sbjct: 85  ESEGYITIEEEIAVKEDMDQLVFSLMPSGAGAILRLDIN----FKQSKAEILENSYGELD 140

Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           K+  ++     + I + GHTD   FR  A  N RLS  R  +    L    VS DRI   
Sbjct: 141 KLLNMMKEYPNMEIQLEGHTD---FRGSASANMRLSEKRVNAVKSYLTSKNVSSDRIKT- 196

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             F   +         +   NRR++  +   +
Sbjct: 197 KAFGGTQPLSRESTEEAKLNNRRVEARILKAE 228


>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 378

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G++   ++ + G+           D +            +RR++I V
Sbjct: 312 RRAETVANYIVSKGINPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370

Query: 339 EDRQ 342
           +  +
Sbjct: 371 QGSK 374


>gi|54309710|ref|YP_130730.1| putative peptidoglycan-associated lipoprotein [Photobacterium
           profundum SS9]
 gi|46914148|emb|CAG20928.1| putative peptidoglycan-associated lipoprotein [Photobacterium
           profundum SS9]
          Length = 174

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  T  F   ++    +   +L+   E L++S++  + + GH D          N  L  
Sbjct: 68  QEQTVYFKFDTAEIQADYQAMLEAHAEFLSNSSDVKVIVEGHADER---GTPEYNIALGE 124

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  Q L   GVS  +IS +S +   +  +        + NRR  ++
Sbjct: 125 RRANAVVQYLQALGVSASQISIVS-YGEEKPLVLGHTDADYAKNRRAVLV 173


>gi|262198423|ref|YP_003269632.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081770|gb|ACY17739.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 1264

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 70/246 (28%), Gaps = 12/246 (4%)

Query: 101  SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
            +  E         ++G         R +++     +             D     D C  
Sbjct: 1025 AGTERGPGGRPGAELGDGGDVDASDRDDDSDGDGISDAVDACPTQLEDLDGYVDTDGCPD 1084

Query: 161  TDLEKSINKEENYFLPPLSKEKILAM--KRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
             D ++   ++     P ++     A    R +    +A  + +       +         
Sbjct: 1085 LDNDEDGVRDYLDGCPDVAGVASEAGCPARDRDGDTVADYLDNCPDTPGYEVFHGCSE-- 1142

Query: 219  TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASP 276
                 +    I       FD            +  ++  +L     +    I G+TD   
Sbjct: 1143 EPLALLTPEHIALTEAVAFDADRVRLRRHARRMFAEVAAILHAHPSLRLIQIEGYTDDR- 1201

Query: 277  FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                   N R+S  RA      L+  GV+E R+  + G+   R    +        NRR+
Sbjct: 1202 --GDLEANLRISQHRAEIVRAFLIARGVAEHRLRAV-GYGSARPIGDNRSERGRELNRRV 1258

Query: 335  DILVED 340
            ++ +  
Sbjct: 1259 ELRILR 1264


>gi|152988440|ref|YP_001349604.1| hypothetical protein PSPA7_4250 [Pseudomonas aeruginosa PA7]
 gi|150963598|gb|ABR85623.1| probable outer membrane lipoprotein [Pseudomonas aeruginosa PA7]
          Length = 159

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +     P++   L KI   L     + + + GHTD          N +LS  R
Sbjct: 52  SKVLFGNNLDRLNPDSRTTLTKIARALLDVGIDKVRLEGHTDNY---GDEGYNLKLSERR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A S   V  ++G+    I ++ G    R    +        NRR+ I+V
Sbjct: 109 AESVAAVFREAGMPAANI-EVRGLGMSRPVADNKTRAGRSENRRVAIIV 156


>gi|255318660|ref|ZP_05359891.1| outer membrane protein [Acinetobacter radioresistens SK82]
 gi|262379115|ref|ZP_06072271.1| outer membrane protein [Acinetobacter radioresistens SH164]
 gi|17978530|gb|AAK57731.1| OmpA-like protein precursor [Acinetobacter radioresistens]
 gi|255304342|gb|EET83528.1| outer membrane protein [Acinetobacter radioresistens SK82]
 gi|262298572|gb|EEY86485.1| outer membrane protein [Acinetobacter radioresistens SH164]
          Length = 348

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +        N RLSL RA
Sbjct: 230 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNT---GPRALNERLSLARA 286

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  +   R++   GFA  +    +        NRR+   +   +
Sbjct: 287 NSVKSSLVNEYNIDPSRLTA-QGFAWDQPIADNSTKEGRAMNRRVFATITGSR 338


>gi|254500568|ref|ZP_05112719.1| OmpA family protein [Labrenzia alexandrii DFL-11]
 gi|222436639|gb|EEE43318.1| OmpA family protein [Labrenzia alexandrii DFL-11]
          Length = 193

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 8/156 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +++++  A  +       +                 L S+        FD  S+   
Sbjct: 37  QGAQEKVEVSADALQRAALENIQKYPGADSPQTIPMYQQLASLRQFNIEITFDFDSARIR 96

Query: 246 PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           PE+   +  I + L       +   I GHTDA   +     N  LS  RA +  + L+ +
Sbjct: 97  PESYEAVGLIADALHTPYLQGQTFFIVGHTDA---KGDRTYNLELSQRRAQAIREALVTT 153

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             V    +  + G    +L+  +DP  + NRR+ ++
Sbjct: 154 FQVPGSTLFSV-GLGEEQLRDPADPFAAVNRRVQLI 188


>gi|117920980|ref|YP_870172.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117613312|gb|ABK48766.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 290

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +++  +     +   L +I E L++  +V  + +  +TD+         N ++S  RA S
Sbjct: 184 YEEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
                + SG+ +DRI  + G    R   ++D     + NRR+ I +   
Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRISKP 288


>gi|86136016|ref|ZP_01054595.1| OmpA family protein [Roseobacter sp. MED193]
 gi|85826890|gb|EAQ47086.1| OmpA family protein [Roseobacter sp. MED193]
          Length = 188

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 14/107 (13%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F              L++       +     I GHTD+         N RLS  RA + 
Sbjct: 88  FFATDKHYISAAGKTRLKEFFNSNKGNVRSFVIAGHTDSR---ASDEYNIRLSQRRANAV 144

Query: 296 YQVLMKSGVSED---RISKISGFAHHRLKIASDPMN--SANRRIDIL 337
                  GV++    RI+ I  +     ++ +   +  + NRR++I 
Sbjct: 145 A------GVAKSVGARIADIRAYGERDPRVPNTSASNMAQNRRVEIY 185


>gi|84623210|ref|YP_450582.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84367150|dbj|BAE68308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 172

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168


>gi|83854895|ref|ZP_00948425.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83842738|gb|EAP81905.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 632

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+     T+  + +I E+L    ++   ++G+TD+         N  LS  RA S 
Sbjct: 498 FEPGSATIDASTLGTMDQIAEILQDCRDIALEVQGYTDSQ---GREEMNLALSQSRAQSV 554

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L    V         G+       ++D       NRRI+  +
Sbjct: 555 LNELRARRVITGSFVA-KGYGEESPVASNDTEEGREANRRIEFKL 598


>gi|170696031|ref|ZP_02887168.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170139023|gb|EDT07214.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 646

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 11/107 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-----GHTDASPFRNIARDNWRLSLDR 291
           F  SS+         L +   VL        +      G++D        + N +LS +R
Sbjct: 540 FGSSSARVPAAANEDLGQSARVLNACARNGRVAKLEVAGYSDNV---GGEQANLQLSKER 596

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           A +    L+K+GV  D + +  G+        +D  +    NRRI+ 
Sbjct: 597 AEAVRSYLVKAGVPGDSL-RAQGYGQAHPIAGNDTASGRFANRRIEF 642


>gi|83954511|ref|ZP_00963222.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
 gi|83840795|gb|EAP79966.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
          Length = 234

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 4/103 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +T  F  +S+        VL++    +    E    + GHTDA         N  L L 
Sbjct: 85  ESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAV---GSNSYNKALGLR 141

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           RA S    L   G+S  R+  +  F   +  I +     ANRR
Sbjct: 142 RAQSVVGFLSTQGISRSRLEAVVSFGETQPLIVTQGRERANRR 184


>gi|312131656|ref|YP_003998996.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311908202|gb|ADQ18643.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 418

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F++ S++    +   +  I E+L    +  I I G+TD +        N +LS +RA + 
Sbjct: 315 FEQGSALIDASSQKEVDNIAEILKAYPDVNIKIGGYTDNT---GSDEINTKLSAERAANV 371

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              L+  G+   R+    G+        +        +RRI + V  +
Sbjct: 372 LAALVDRGIEASRLES-EGYGPLHPIADNSTEEGREQDRRIAVRVTKK 418


>gi|90578362|ref|ZP_01234173.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic components [Vibrio angustum S14]
 gi|90441448|gb|EAS66628.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic components [Vibrio angustum S14]
          Length = 508

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 11/117 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           +    +F   S    P     L    E L+H       + GHT     R     N  LS 
Sbjct: 393 KTRPVIFSSGSERLTPNGQQQLNLTAESLSHYPNFRILVEGHT---GLRGDKALNIELSA 449

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNS-ANR--RIDILVED 340
            RA +    L+   G    RI  + G       I  + +     ANR  R++I +  
Sbjct: 450 KRAKAVKSYLVNQLGFEASRIHAV-GKGSDEPLIQLSGESQRRYANRLMRVEIALMS 505


>gi|157962526|ref|YP_001502560.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157847526|gb|ABV88025.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 324

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             I +  +  R   +F   SS     + +  + I   LA     IS+  +TD+       
Sbjct: 206 PTINVQSVSIRGNSVFGFDSSKLTDTSALD-EVIKSALASKNASISVTAYTDSL---GAE 261

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           R N  L+  RA +     +  GV+  RI  I          ++      + NRR++I +
Sbjct: 262 RYNLALAKRRAEATQAYFITHGVAPSRIH-IDWKGEENPVSSNMTAKGRALNRRVEIEI 319


>gi|251793057|ref|YP_003007783.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534450|gb|ACS97696.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
           NJ8700]
          Length = 154

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT +F         E + +L      L  +    + + GHTD          N  
Sbjct: 45  LQQRYNTVLFGFDKYDIQGEYVQILDAHAAYLNATPATSVRVEGHTDER---GTPEYNMA 101

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA++    L   GV   +IS +S +   +         +   NRR
Sbjct: 102 LGERRAHAVQNYLTSKGVQAGQISTVS-YGEEKPAELGHDEAAYSKNRR 149


>gi|37704604|gb|AAR01574.1| OprF [Pseudomonas sp. MFY32]
          Length = 316

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316


>gi|326794724|ref|YP_004312544.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326545488|gb|ADZ90708.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 304

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSL 289
           R   +F  + +         L  +   + +    + I I GHTD        RDN  LS 
Sbjct: 183 RTAALFPTNGADLTDRIKHRLDLVALYVNNDPSIQYIYIDGHTDTI---GSRRDNRELSK 239

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            RA      L++ GV  D I             +S        NRR+ I +E 
Sbjct: 240 KRAEKITAYLLEQGVPADMIVS-RYHGERYPVASSRTNQGRERNRRVTIRLER 291


>gi|167625831|ref|YP_001676125.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355853|gb|ABZ78466.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 201

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           Q    +F   S    P+    ++ I   +       ++  GH   +        N  LS 
Sbjct: 73  QELKVLFANDSYYIDPQYYPQVEVIATFMRDYPNTQAVIEGHCSKT---GSHEHNQVLSQ 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   +L +  G+  DR+S + G++  R    +    +   NRR+
Sbjct: 130 NRANAVSSLLAERFGIDSDRLSAV-GYSFDRPVDPTHTRAAHKVNRRV 176


>gi|88811500|ref|ZP_01126755.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
 gi|88791389|gb|EAR22501.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
          Length = 435

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F   S+        VL K+   L      + + GHTD  P R+   +DN+ LS  RA +A
Sbjct: 324 FRSGSAELSAAYAPVLDKVAGALKQVPGRVLVVGHTDDVPIRSLRFKDNYELSRQRALNA 383

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDIL 337
            + L +      R+    G    + +   + +    + NRRI+I+
Sbjct: 384 AERLKERLDDPGRV-SYLGVGPDQPRYRPVDTPENRARNRRIEII 427


>gi|126463896|ref|YP_001045009.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105707|gb|ABN78237.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 254

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 65/211 (30%), Gaps = 6/211 (2%)

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +      +          +T D                    E+  L P +       +
Sbjct: 44  RDAFAAARSGNGQARGLKLVTVDRIGPAPAVADVPDSLEAPAGEDPGLRPTASTDSAPGE 103

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
             + +  L +      +        +         G+L   +       F   S++   +
Sbjct: 104 TGRPVLGLPQGADRLAAADPLPERRETAEVSPESFGLLDPALQVNVRIHFSFDSAVLAAD 163

Query: 248 TIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
              +L ++  V+  S      I GHTDA         N +LSL RA    + L    G++
Sbjct: 164 QTPLLAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIA 220

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +R+  + G     L    DP +  NRR++ 
Sbjct: 221 PERLRAV-GMGERFLADKKDPRSGENRRVEF 250


>gi|332188223|ref|ZP_08389951.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
 gi|332011722|gb|EGI53799.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
          Length = 174

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        PE+  +L      L       I+I GH D          N  L   RA +A
Sbjct: 72  FGLDQYDIDPESRAILDSQAGWLMRYPNVRITIEGHCDER---GTREYNLALGDRRANAA 128

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338
              L   GVS DR+  +  +   R     + +   + NRR + +++
Sbjct: 129 KNYLAARGVSADRM-TVISYGKERPIALGSDEASYAQNRRAVTVVL 173


>gi|207725377|ref|YP_002255773.1| outer membrane protein [Ralstonia solanacearum MolK2]
 gi|207743944|ref|YP_002260336.1| outer membrane protein [Ralstonia solanacearum IPO1609]
 gi|300704759|ref|YP_003746362.1| outer membrane protein, ompa domain [Ralstonia solanacearum
           CFBP2957]
 gi|206590613|emb|CAQ37575.1| outer membrane protein [Ralstonia solanacearum MolK2]
 gi|206595346|emb|CAQ62273.1| outer membrane protein [Ralstonia solanacearum IPO1609]
 gi|299072423|emb|CBJ43768.1| putative outer membrane protein, ompA domain [Ralstonia
           solanacearum CFBP2957]
          Length = 218

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++  PE    L  +   L + T  + I  GHTD+       + N RLS+ RA
Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342
            +    L+  G+  +R+    G    +LK+       +          NRR+++ V   +
Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215


>gi|197117521|ref|YP_002137948.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
 gi|197086881|gb|ACH38152.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
          Length = 450

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 67/275 (24%), Gaps = 10/275 (3%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P        +     E +    +   K    I    T   V             Q L  
Sbjct: 182 RPQIAAATPMTNPAATEASTSLSTQTAKDQPVITHRETPKPVPASPAPATVATTPQSLAV 241

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +        S          +                    +             + + 
Sbjct: 242 PVIATPGIASSASSVQPPPVAATVATTPQSLAVPVIVTPGIASSASSVQPPPVAAEIAKT 301

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                      +T      +   +     T    +   ++       FD +S    P  I
Sbjct: 302 APAPRENDSTEATDQAKQIELEAEKKPASTPSVPVAAPLLKATFE--FDCNSYKIRPSFI 359

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307
            V +KIG  +  + ++I  I GH D          N  LS  RA    Q LMK   +S D
Sbjct: 360 DVGRKIGLFMKRNPQIIAQIHGHAD---ITGSDDHNLALSEKRAVRTKQYLMKMYNLSAD 416

Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           R  +I           +        NRR  +++  
Sbjct: 417 RF-EIRTMGSSEPIADNTTEVGRKKNRRALVIILK 450


>gi|170717596|ref|YP_001783489.1| peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
 gi|168825725|gb|ACA31096.1| Peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
          Length = 151

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           + L+   + +       +      +  +  + NT  F+  S     E   +L      L 
Sbjct: 15  AVLAACSSSDNASKTNAQMFGGYSVTDLQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLK 74

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +    + + GH D          N  L L RA +    L+  GV   ++S +S +   +
Sbjct: 75  STPASKVLVEGHADER---GTPEYNMALGLRRADAVKNFLLNKGVQASQLSTLS-YGEEK 130

Query: 320 L--KIASDPMNSANRR 333
                 ++   S NRR
Sbjct: 131 PAELGHNEAAYSKNRR 146


>gi|19881377|gb|AAM00931.1|AF491823_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGEE 344


>gi|33519799|ref|NP_878631.1| peptidoglycan-associated lipoprotein precursor [Candidatus
           Blochmannia floridanus]
 gi|33504144|emb|CAD83406.1| peptidoglycan-associated lipoprotein precursor [Candidatus
           Blochmannia floridanus]
          Length = 174

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 9/149 (6%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D     +  L+ + +DN+    +  +    I    +  +NT  F       LP    +
Sbjct: 31  INDNKSNENMYLNFVPSDNLKDNDIPISKTNHIQN--LKLKNTIYFSLDQYCVLPIFFEI 88

Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L    + L  +    I I GHTD          N  L   RAY+  + L   GV  ++I 
Sbjct: 89  LDLHADFLCNNPLYKIIIEGHTDER---GTPEYNIGLGERRAYAVKKYLQSKGVLSNQID 145

Query: 311 KISGFAHHRLKI--ASDPMNSANRRIDIL 337
            +S +   +      ++   S NRR+ +L
Sbjct: 146 TVS-YGKEKPIAFGQNEESYSKNRRVVLL 173


>gi|313203341|ref|YP_004041998.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312442657|gb|ADQ79013.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 662

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 34/166 (20%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
            L    +V+   F        IS   Q     ++       P +   LQ + ++L  +  
Sbjct: 495 SLSTQGLVESKTFNVDFKLSAISKPIQIENIFYESGKWELTPASENGLQVLVKLLNDNPN 554

Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322
           +   I  +TD         DN  LS  RA S    L+   ++ DR++ + G+   +  + 
Sbjct: 555 ITIEISANTD---LVGSNADNKALSTKRAKSVVDYLISKKIAPDRLTSV-GYGEEKPVVV 610

Query: 323 ------------ASD----------PMNSA------NRRIDILVED 340
                        +D                     NRR +  V  
Sbjct: 611 DAAMAKKYPFLKENDVLDEAYVLKLTPAQQEVANQINRRTEFRVLK 656


>gi|296387971|ref|ZP_06877446.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           PAb1]
 gi|313108871|ref|ZP_07794854.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
           aeruginosa 39016]
 gi|310881356|gb|EFQ39950.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
           aeruginosa 39016]
          Length = 321

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281


>gi|152993346|ref|YP_001359067.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
 gi|151425207|dbj|BAF72710.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
          Length = 172

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 6/119 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283
           +  S  D   +  F              +       A ++  I + G+ D          
Sbjct: 58  LGNSSADGFTSVYFTFDDYSISGAMQSKISADASRAAQTSGKIKVEGNCDEF---GTDEY 114

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
           N+ L L RA +    L   GV   R+  +S +          +D   + NRR+D+ +  
Sbjct: 115 NYALGLKRAKAVKDALRAEGVDTARMVMVS-YGESNPVCSSPTDSCYARNRRVDLRLAR 172


>gi|114776885|ref|ZP_01451928.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
 gi|114552971|gb|EAU55402.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
          Length = 200

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 24/197 (12%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             S     +    +        +        +  L+ + + I+   +   A    + V  
Sbjct: 13  GPSEPESTAAPAGDQQLASENEQLGAEVAALRAELKQVNQDIADKKAQATASPKPERVAT 72

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDAS 275
              R  + +S         F         E+   L ++ +        + I +RG+TD  
Sbjct: 73  PVDRLWVTVS---------FRSGYMELTRESRKALSRLAKKFLSKPREQSIEVRGYTDDE 123

Query: 276 PFRN----------IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           P               + N  LS  RA +  Q L+ + +  D + +  GF        + 
Sbjct: 124 PIGGYPGHRHKPHHPYKTNMALSHARATNVAQALIDACIPNDSV-RALGFGASNYVADNA 182

Query: 326 PM--NSANRRIDILVED 340
                  NRR +I +  
Sbjct: 183 TAEGRQRNRRAEIHLVR 199


>gi|15598722|ref|NP_252216.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
 gi|218890247|ref|YP_002439111.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254242186|ref|ZP_04935508.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
 gi|9949675|gb|AAG06914.1|AE004773_3 probable outer membrane protein precursor [Pseudomonas aeruginosa
           PAO1]
 gi|126195564|gb|EAZ59627.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
 gi|218770470|emb|CAW26235.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
          Length = 321

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281


>gi|312132146|ref|YP_003999486.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311908692|gb|ADQ19133.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 805

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               FD        +    L K+  ++     +   +  HTD+    +    N  LS +R
Sbjct: 691 ENIYFDYGKYYIRRDAREGLDKLVSLMREYPNMKVELYSHTDSR---SSKEFNQTLSENR 747

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           A S  + L K G+S  RI    GF  ++L          S+  +  NRR +I V
Sbjct: 748 AKSTAEYLFKRGISRSRIVDYKGFGENQLVNGCADGVKCSEAEHQLNRRTEIKV 801


>gi|78048827|ref|YP_365002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294626855|ref|ZP_06705447.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665412|ref|ZP_06730700.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325929356|ref|ZP_08190486.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
 gi|78037257|emb|CAJ25002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292598869|gb|EFF43014.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604823|gb|EFF48186.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325540268|gb|EGD11880.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
          Length = 172

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168


>gi|114776299|ref|ZP_01451344.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
 gi|114553129|gb|EAU55527.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
          Length = 167

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F   SS         L      L  +++E I+I G+ D          N  L   R
Sbjct: 62  NAVYFAFDSSALDASARATLDGYAAWLNANNSENITIEGNCDER---GSREYNLALGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
           A S    L  +G++  RI  +S F   R       +   + NRR DI+
Sbjct: 119 ADSVRDYLTANGIAAGRIDTVS-FGEERPVCKGTGEACWAQNRRGDIV 165


>gi|91762267|ref|ZP_01264232.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718069|gb|EAS84719.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
          Length = 180

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
            +   F  + ++    +   L+K    L  ++++  +  GH D          N  L   
Sbjct: 73  PDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADER---GTREYNLALGER 129

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           RA SA   LM  G+S +RI  +  +   R     ++    S NRR
Sbjct: 130 RANSAKDYLMTYGISSERI-SVLSYGKERPVDSGSNPLAWSKNRR 173


>gi|254564208|ref|YP_003071303.1| Outer membrane lipoprotein omp16 [Methylobacterium extorquens DM4]
 gi|254271486|emb|CAX27501.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
           extorquens DM4]
          Length = 170

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+   P     L K    L         I GH D          N+ L   R
Sbjct: 60  DRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREYNYSLGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L   G+S  R+  +S +   R     +D    S NRR
Sbjct: 117 AQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159


>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
 gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
          Length = 346

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+   VL  I   +A      I + G+TD          N +LS  RA + 
Sbjct: 233 FAFGKANLKPQAQSVLDGIYSEIAQVNNADIKVSGYTDRI---GSDAYNQKLSQRRAETV 289

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342
              L+  GV+++ IS   G+        +  D +            +RR++I V   +
Sbjct: 290 ANYLVSKGVAQNAISAA-GYGKANPVTGTKCDAVKGRKALIACLADDRRVEIAVNGSK 346


>gi|113970709|ref|YP_734502.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113885393|gb|ABI39445.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 290

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +D+  +     +   L +I E L++  +V  + +  +TD+         N ++S  RA S
Sbjct: 184 YDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
                + SG+ +DRI  + G    R   +++     + NRR+ I +   
Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNEDIEERALNRRVVIRISKP 288


>gi|254181081|ref|ZP_04887679.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|254195586|ref|ZP_04902013.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|169652332|gb|EDS85025.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|184211620|gb|EDU08663.1| ompA family protein [Burkholderia pseudomallei 1655]
          Length = 188

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 65  LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 121

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 122 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 178


>gi|116051525|ref|YP_789639.1| OmpA family membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115586746|gb|ABJ12761.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 321

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281


>gi|254208912|ref|ZP_04915260.1| OmpA family protein [Burkholderia mallei JHU]
 gi|147750788|gb|EDK57857.1| OmpA family protein [Burkholderia mallei JHU]
          Length = 193

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 70  LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 127 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 183


>gi|302037323|ref|YP_003797645.1| hypothetical protein NIDE1997 [Candidatus Nitrospira defluvii]
 gi|300605387|emb|CBK41720.1| conserved exported protein of unknown function, putative Outer
           membrane protein OmpA [Candidatus Nitrospira defluvii]
          Length = 325

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 8/140 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +  + +V  V  +     I  +         FD + +   P++   LQ++  +L  
Sbjct: 188 VAKPMETNKLVGFVGAQDMADQISSNGRVSLYGLYFDTNKAELRPDSEPTLQEMATLLKG 247

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
             +  + + GHTD         +N  LS  RA++    L  K G+++ R++ + G +   
Sbjct: 248 RPQLKLLVVGHTDNI---GSYEENGILSQRRAHAVINALASKHGIAKARLTPV-GDSFSA 303

Query: 320 LKIASDPM--NSANRRIDIL 337
              ++      + NRR++++
Sbjct: 304 PIASNKTEEGRAKNRRVELV 323


>gi|262066274|ref|ZP_06025886.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291380021|gb|EFE87539.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 75

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + GHTD+       + N  LS  RA +    L++ G++E+RI  I           ++  
Sbjct: 3   LEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATNETP 59

Query: 328 NSA--NRRIDILVEDR 341
                NRR++  +  R
Sbjct: 60  EGRLQNRRVEFRLVQR 75


>gi|90412130|ref|ZP_01220136.1| putative peptidoglycan-associated lipoprotein [Photobacterium
           profundum 3TCK]
 gi|90326854|gb|EAS43239.1| putative peptidoglycan-associated lipoprotein [Photobacterium
           profundum 3TCK]
          Length = 174

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q  T  F   ++    +   +L+   E L++S++  + + GH D          N  L  
Sbjct: 68  QEQTVYFKFDTAEIQADYQAMLEAHAEYLSNSSDVKVIVEGHADER---GTPEYNIALGE 124

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  Q L   GVS  +IS +S +   +  +        + NRR  ++
Sbjct: 125 RRANAVAQYLQALGVSASQISIVS-YGEEKPLVLGHTDADYAKNRRAVLV 173


>gi|89900877|ref|YP_523348.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89345614|gb|ABD69817.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 177

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286
           I+       FD  S +  PE   +++     L    +  ++I GHTD          N  
Sbjct: 67  IVGGPRVVYFDYDSYVIKPEFQSLIEVHARYLKADKSRKVAIEGHTDER---GGREYNLA 123

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           L   RA +    L   GV + ++  +S F   +  +  + +   + NRR +I
Sbjct: 124 LGQKRAEAVRSALGLLGVVDSQVEAVS-FGKEKPAVQGSDEAAMAKNRRAEI 174


>gi|296238955|gb|ADH01478.1| OmpA family protein [Pseudomonas sp. 2663]
          Length = 535

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
           R+   FD   +    +    ++++G   A     + + GHTD  P R     +N  LS  
Sbjct: 377 RSDGAFDVGKAQVRTDFERNIERLGAAFAPWPGDLEVIGHTDRQPIRTSEFGNNQALSEA 436

Query: 291 RAYSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L ++ +            R    SG    +   ++    +   NRR+D+L
Sbjct: 437 RARTVADELRRTALPGGAQAPGNAVQRNIGFSGRGDTQPIDSAQTPAAYERNRRVDVL 494


>gi|300023927|ref|YP_003756538.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525748|gb|ADJ24217.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 171

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   S    PE    L K  + L   ++  I+I GH D          N  L   R
Sbjct: 58  DIVYFSTDSIDLTPEAQQTLSKQAQWLQQYSQYAITIEGHADER---GTREYNIALGARR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L + G++  RI  IS +   R     +D    S NRR
Sbjct: 115 ATTVRNFLSQHGINGARIRTIS-YGKERPVAVCNDISCWSQNRR 157


>gi|83720431|ref|YP_442168.1| OmpA family protein [Burkholderia thailandensis E264]
 gi|83654256|gb|ABC38319.1| OmpA family protein [Burkholderia thailandensis E264]
          Length = 224

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214


>gi|53720132|ref|YP_109118.1| outer membrane protein a precursor [Burkholderia pseudomallei
           K96243]
 gi|53724795|ref|YP_102249.1| OmpA family protein [Burkholderia mallei ATCC 23344]
 gi|76811968|ref|YP_334381.1| outer membrane protein a [Burkholderia pseudomallei 1710b]
 gi|126442031|ref|YP_001059910.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126452054|ref|YP_001067198.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|167825270|ref|ZP_02456741.1| ompA family protein [Burkholderia pseudomallei 9]
 gi|167919986|ref|ZP_02507077.1| ompA family protein [Burkholderia pseudomallei BCC215]
 gi|226197831|ref|ZP_03793405.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237813303|ref|YP_002897754.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|238561689|ref|ZP_00441673.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|242317986|ref|ZP_04817002.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|251766980|ref|ZP_02265557.2| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254177032|ref|ZP_04883689.1| OmpA family protein [Burkholderia mallei ATCC 10399]
 gi|254258959|ref|ZP_04950013.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254360032|ref|ZP_04976302.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|262193316|ref|YP_001079767.2| OmpA family protein [Burkholderia mallei NCTC 10247]
 gi|52210546|emb|CAH36529.1| outer membrane protein a precursor [Burkholderia pseudomallei
           K96243]
 gi|52428218|gb|AAU48811.1| OmpA family protein [Burkholderia mallei ATCC 23344]
 gi|76581421|gb|ABA50896.1| outer membrane protein a precursor [Burkholderia pseudomallei
           1710b]
 gi|126221524|gb|ABN85030.1| outer membrane protein A [Burkholderia pseudomallei 668]
 gi|126225696|gb|ABN89236.1| OmpA family protein [Burkholderia pseudomallei 1106a]
 gi|148029272|gb|EDK87177.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|160698073|gb|EDP88043.1| OmpA family protein [Burkholderia mallei ATCC 10399]
 gi|224812455|gb|ACN64870.1| OmpA family protein [Burkholderia pseudomallei]
 gi|225930019|gb|EEH26032.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237505834|gb|ACQ98152.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|238524141|gb|EEP87576.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|242141225|gb|EES27627.1| OmpA family protein [Burkholderia pseudomallei 1106b]
 gi|243064216|gb|EES46402.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|254217648|gb|EET07032.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|261826008|gb|ABN03326.2| OmpA family protein [Burkholderia mallei NCTC 10229]
 gi|261835034|gb|ABO04145.2| OmpA family protein [Burkholderia mallei NCTC 10247]
          Length = 224

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214


>gi|156976199|ref|YP_001447105.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
 gi|156527793|gb|ABU72878.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
          Length = 350

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   ++       I + GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNV---GSQLANLNVSRQRAEQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
             + L++ GV    + ++          +++     + NRR+ + +    
Sbjct: 269 VAEALIQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRDN 317


>gi|124386037|ref|YP_001026945.1| OmpA family protein [Burkholderia mallei NCTC 10229]
 gi|217420891|ref|ZP_03452396.1| outer membrane protein A [Burkholderia pseudomallei 576]
 gi|217396303|gb|EEC36320.1| outer membrane protein A [Burkholderia pseudomallei 576]
          Length = 179

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 56  LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 112

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 113 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 169


>gi|124004962|ref|ZP_01689805.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123989640|gb|EAY29186.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 645

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F +  +  +P+    L K+  +LA   +  + I GHTD+      +  N +LS +RA + 
Sbjct: 539 FKEGKADVIPDMEADLDKLVILLADHPKLGLKISGHTDS---SGDSDANLKLSQNRADAI 595

Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASD-PMNSA--NRRIDILV 338
            + ++  G     R++ I G+      I S+        NRR++  +
Sbjct: 596 KKYIVDKGKFDPKRVTAI-GYGDTVPIIKSEKTDEDKKINRRVEFEI 641


>gi|114763456|ref|ZP_01442863.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114543994|gb|EAU47005.1| OmpA domain protein [Roseovarius sp. HTCC2601]
          Length = 637

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 17/304 (5%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +  +  TD      +          +      + +  +  +   +        E   +
Sbjct: 309 IALLALEGTDQGLFDRVVGELETGLPEVFALKAVLPETPDAKDEGPREFTATLSPEGSVQ 368

Query: 109 NSVDLKIGSTNQKKQY-------QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
               ++     Q                    +  +  +      L      G       
Sbjct: 369 LRGRVRSEIARQTADSLARALFTSASVYTAARVDETLPANWSPRVLAGLEALGGLSNGVV 428

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
            +   +         P ++++I  +   K  +    +IS T    +   +      E   
Sbjct: 429 RVTPDLVSLSGNTGNPDAEDEISGLLADKLGEAGEFEISVTYQEKLDPTLGIPTPEECEA 488

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
             + I    + N   F+  S+        V+  I E+L    +  + I+GHTD+      
Sbjct: 489 QIVEIIGDRKIN---FEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQ---GR 542

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              N +LS DRA +    L    V      ++ G+   +    +        NRRI   +
Sbjct: 543 ESMNEQLSQDRAQAVLDALRNRRVLTAS-YRVKGYGEMQPIADNGTEEGREANRRIAFRL 601

Query: 339 EDRQ 342
              +
Sbjct: 602 IRPE 605


>gi|37704650|gb|AAR01597.1| OprF [Pseudomonas sp. MFY138]
          Length = 314

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGHT 267

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314


>gi|152982349|ref|YP_001354513.1| hypothetical protein mma_2823 [Janthinobacterium sp. Marseille]
 gi|151282426|gb|ABR90836.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 1376

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 11/142 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                +   +       +  +  S+ + +   +F    +   P     L  +   +    
Sbjct: 62  RAEAIEMRNRAAQVPAAQADMSKSLQEAKGLSLFVSGKADLTPSAKESLDALVAEIHARK 121

Query: 264 E-----VISIRGHTDASPFRNIAR----DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
                  I++ GHTD       A+    DN  LS  RA +    L ++  +      I G
Sbjct: 122 GVIAGMRIAVVGHTDNQGLSPNAKRIFTDNQGLSEARALTVAAYLKQALNNPAITYSIDG 181

Query: 315 FAHHRLKIASDPMNS--ANRRI 334
               +   ++        NRR+
Sbjct: 182 KGESQPLASNATPEGMSRNRRV 203


>gi|37704628|gb|AAR01586.1| OprF [Pseudomonas sp. MFY72]
          Length = 322

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++  +    FD   S     +   ++ + + +        ++ GHT
Sbjct: 216 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 275

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +   VL+ + GV   R++ + G+   R   
Sbjct: 276 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVA 322


>gi|315179667|gb|ADT86581.1| OmpA family protein [Vibrio furnissii NCTC 11218]
          Length = 344

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 226 ISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIAR 282
           I+  + R+T + F              L+ +   +        + I GHTD         
Sbjct: 210 ITFAEARDTSLYFASGQQSLSGAQQHTLRDLISYVVRDKRATHLLIDGHTDNV---GSRL 266

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            N  +S  RA     VL   GV+ D+I +I          ++      + NRR+ I +  
Sbjct: 267 ANLSVSRSRAEQVAAVLETLGVAADKI-QIRAHGSRYPVASNATESGRAQNRRVVIRLVR 325

Query: 341 R 341
            
Sbjct: 326 D 326


>gi|296533201|ref|ZP_06895824.1| type VI secretion system OmpA/MotB family protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296266471|gb|EFH12473.1| type VI secretion system OmpA/MotB family protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 162

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 12/153 (7%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           LA ++   L+  +A  +   V  +  RT + I       + M+   S+      + +L +
Sbjct: 15  LAARLREFLAPEIAQGL-VTVTGDVQRTMVRIQ-----GSGMYASGSATLNERFVPLLTR 68

Query: 255 IGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           IGE +         I GH+D  P R      N+ LS  RA +A +V+ ++ G+   R   
Sbjct: 69  IGEAVREEDAGRTDILGHSDNQPIRTLRFPSNFHLSQARAEAALEVIRRASGLEAARFQA 128

Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             G         +        NRRI+++V +R+
Sbjct: 129 -EGRGDAEPVADNRTAEGREANRRIEVVVLNRR 160


>gi|262376326|ref|ZP_06069556.1| predicted protein [Acinetobacter lwoffii SH145]
 gi|262308927|gb|EEY90060.1| predicted protein [Acinetobacter lwoffii SH145]
          Length = 492

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 95/309 (30%), Gaps = 20/309 (6%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +   +  FLV   +   D +                  AS  +    N    S Q +++
Sbjct: 180 LILAGLILFLVRSCMQD-DVEDSNTQATSE---VAAAQPASLRLSTGSNGEIVSCQLQLN 235

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
                 I +N +                  +  ++         +      +     +  
Sbjct: 236 NPQYMEILQNEIKQIFNYNIGCGALSSEVYHSEFIDQDTIPTVLRTMQGMPNVSLDWIGN 295

Query: 160 STDLEKSINKEENYFLPP---LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +  + N E          L+K   +  ++     D+    +S     +A      V 
Sbjct: 296 QVSVRAATNAEAERLAAQIRSLAKNVTVVTQQPLNRSDVINTANSEAEQALASIKTDNVK 355

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275
                T + + II+      FD +S+       +VL +   +L  +  VI  + GH DA 
Sbjct: 356 ALDVATALNLQIIN------FDTASTEVPEVNKLVLDQAAALLQRAPHVILKVTGHADAQ 409

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
                  +N  LS+ RA +    L+  GV+  ++  + G    +    +        NRR
Sbjct: 410 ---GSEAENKVLSVQRAQAITSYLVGKGVNPAQLQAV-GMGEDQPVEPNATPAGQFQNRR 465

Query: 334 IDILVEDRQ 342
           +   V + +
Sbjct: 466 VTFEVVNTE 474


>gi|261414609|ref|YP_003248292.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371065|gb|ACX73810.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327079|gb|ADL26280.1| putative peptidoglycan-associated lipoprotein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 192

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 31/198 (15%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
               E       + +         +  +        LA    +RL+    ++   ++   
Sbjct: 23  KEKPETDPQPQTAPEAPADSTLNLDALVADTLDADSLARLEAERLEAERARLEELIN--- 79

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVI 266
                             I + D      FD   S        +L ++ E+L   +  ++
Sbjct: 80  -----------------RIMLED----VYFDYDRSELTENAKRLLAQVAEILVNENRFIV 118

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS 324
           ++ GHTDA         N  L   R+    + L+  GV  +R+  +S +   R K+    
Sbjct: 119 TVEGHTDAR---GTEDYNISLGARRSTVVREFLIAYGVDANRLVSVS-YGKERPKVQGTD 174

Query: 325 DPMNSANRRIDILVEDRQ 342
           +   S NRR    V   Q
Sbjct: 175 ETAYSKNRRAHFRVSIDQ 192


>gi|307822249|ref|ZP_07652481.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
 gi|307736815|gb|EFO07660.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
          Length = 100

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               + + I GHTD          +  LS  RAY+ +  L   G+S DRI +  G+A   
Sbjct: 14  KRQPDKVLIEGHTDNV---GSNSTHQGLSDRRAYAVWTALNDMGISSDRI-RTRGYADAY 69

Query: 320 LKIASDPMNSA--NRRIDILVEDRQG 343
               +D       NRR++I++ D  G
Sbjct: 70  PVAGNDTTAGRQLNRRVEIILSDANG 95


>gi|58581292|ref|YP_200308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425886|gb|AAW74923.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 181

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 72  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 129 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 177


>gi|328470357|gb|EGF41268.1| hypothetical protein VP10329_06152 [Vibrio parahaemolyticus 10329]
          Length = 225

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G  L  +      +   E  +           + +  R  +      ++L   +  + + 
Sbjct: 43  GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQMARAAEKKSNNVTSLEMFLDRHNIP 102

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
                     ++I + +Q +   F   S+     +   L+K+G  LA  T+V  +  GH 
Sbjct: 103 HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 157

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D++     A  N  LS  RA    + ++ S +   R+    GF  +  + ++   +    
Sbjct: 158 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 213

Query: 331 NRRIDILVEDRQ 342
           NRR+++++   +
Sbjct: 214 NRRVELMLIVDE 225


>gi|254522020|ref|ZP_05134075.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
 gi|219719611|gb|EED38136.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
          Length = 513

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LP + + L ++ ++L       +SI GHTD          N  LS DRA S 
Sbjct: 412 FATDKAQILPASELQLAQVLQLLQGDPALKLSIEGHTDD---SGAVAHNRSLSEDRARSV 468

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   G++ DR+    GF   +    +      + NRR++++
Sbjct: 469 VAALTAKGIAADRLQAA-GFGADKPVADNGSEEGKARNRRVELV 511


>gi|332663816|ref|YP_004446604.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332630|gb|AEE49731.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 406

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 18/207 (8%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            Q       ++   +++      +     +  K      PP+  E     K  ++  D  
Sbjct: 214 EQPEVVSTPTVKPPTQRIDTPKTNNGGRPTPGKTPPVNNPPVVAENNTTTKNPEKKPDTN 273

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
                ++       + K     T    + I       +  F  + +I    +   L K+ 
Sbjct: 274 STPPKSIDNPDFSTLKK--SDLTMGQTLRIP------SITFAVNDTILSRASYPNLDKLL 325

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +  +  ++  + GHT+          N RLSL RA +    L+K GV  +R  ++ G+
Sbjct: 326 TFMNTNPAIVLEVGGHTNGLCA--DDYCN-RLSLRRARAVVDYLVKKGVKPERF-QVKGY 381

Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340
              +    + +DP    N+R++I + D
Sbjct: 382 GKTQPISTVKNDP---KNQRVEIKILD 405


>gi|284038953|ref|YP_003388883.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283818246|gb|ADB40084.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 285

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 9/168 (5%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +      ++ + +  +L   I  + S L        +  +          +       F 
Sbjct: 122 AGVPEDQVQIQGQASELLNFIKDSTSALSFSFQAITINADWLARHQKYIDLFHPLQLYFP 181

Query: 239 KSSSI--PLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
             S+     P+    +++    L  H TE ++I GHTD++        N +LS  RA   
Sbjct: 182 TGSTEHIVTPDNEQFVREAITYLYNHPTERLTITGHTDST---GTEAFNLKLSRLRAMVV 238

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              L+K G +  R  ++    +      ++       NRR+ +LV+ R
Sbjct: 239 RDKLIKQG-ASKRWIQVIAMGNKLPIAPNNLPEGREANRRVTLLVKKR 285


>gi|94267383|ref|ZP_01290861.1| OmpA/MotB [delta proteobacterium MLMS-1]
 gi|93452026|gb|EAT02724.1| OmpA/MotB [delta proteobacterium MLMS-1]
          Length = 388

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 75/286 (26%), Gaps = 20/286 (6%)

Query: 61  TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120
           T +   +YF P          G+                           V+   G+T  
Sbjct: 90  TWQVGLRYFGPRFVPADPDKSGLLAPSTRSALFYGMAPHSREGIQQGLEQVNRPAGTTPL 149

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
               +    ++  L          +     + +      +   E          +     
Sbjct: 150 AVALRDGGEDLAALDGDSALVVFTDGEADSAAEVLAAADALRDEFGATLCIYPVMVGDDP 209

Query: 181 EKILAMKR------------KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +  +++              +L       +      +     K V          +  
Sbjct: 210 AGLELLEQVVARVDCGFVSQADQLFSGRAMAAFAEKAFLQKVEDKPVAEAVKEKKEPVHR 269

Query: 229 IDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNW 285
            + R     F+   +   P     L +  + L    E   I I GHT        A  N 
Sbjct: 270 TEARRLEVNFEFDQARIRPADQAALGRFAQFLKKYPELEEIEIAGHTCNM---GPAEYNR 326

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA 330
           +LS  RA +  + L++  G++ +R+    G+   +   ++D +   
Sbjct: 327 QLSQRRAANVVKFLVEKEGIASERLLA-KGYGSDKPIASNDTVAGR 371


>gi|19881365|gb|AAM00925.1|AF491817_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGEE 344


>gi|58200723|gb|AAW66611.1| hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGEE 344


>gi|330807377|ref|YP_004351839.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375485|gb|AEA66835.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 167

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F        P +  ++++IG+ L     + + + GHTDA         N +LS+ R
Sbjct: 60  GKVLFGSDVENLNPASTEIVERIGKALLGAGIQRVRVDGHTDA---SGSQAYNEQLSMRR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A S  +VL   G+ E+ + ++ G    +   ++D  +    NRR+ I+V   
Sbjct: 117 AASVSKVLTAVGMREENV-QLRGLGSSKPVASNDTASGRTENRRVAIVVIAD 167


>gi|325926546|ref|ZP_08187862.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
 gi|325543054|gb|EGD14501.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas perforans 91-118]
          Length = 400

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 75/278 (26%), Gaps = 20/278 (7%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            K   + +                 I+   +     + +D++            L +   
Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINAIGEGGSGGSLIDVQSDGGGTYNGPAGLISLDG 190

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189
             + +  SE       R    G        +  + +    +  P    +           
Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTVGT 250

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              +     +           + K          + I++ D+    +FD   S   P+  
Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFAPPGAPCGYL-ITLNDR---ILFDFDKSDIRPDAA 306

Query: 250 VVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL          + + + +RGHTDA   +     N  LS  RA +             +
Sbjct: 307 RVLDTLGAAQTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361

Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339
            +   G+   +    +      +P     NRR++I + 
Sbjct: 362 SANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399


>gi|322420089|ref|YP_004199312.1| hypothetical protein GM18_2585 [Geobacter sp. M18]
 gi|320126476|gb|ADW14036.1| conserved repeat domain protein [Geobacter sp. M18]
          Length = 1890

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 235  PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
              F    S+   E   +L     VL        I  GHTD          N  LS  R  
Sbjct: 1618 GAFIFDKSVLTTEAKRLLSGAARVLRERPRERVILEGHTDGI---GTVEYNMALSKRRCD 1674

Query: 294  SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            +A + L++  GV+  R+ +   +   R    +   +    NRR+++
Sbjct: 1675 AAAEYLIRVEGVAPSRLLR-RWYGKSRPVADNVTTSGRRLNRRVEL 1719


>gi|19881369|gb|AAM00927.1|AF491819_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGEE 344


>gi|307727324|ref|YP_003910537.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307587849|gb|ADN61246.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 230

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 7/128 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             LS L      + +    +  G+ I+I  +    +F+   +  L E+  VL +I  VL 
Sbjct: 91  QLLSLLAPLQDNRQITIAHSPQGVEIAINAK---VLFNSGDARLLQESYGVLNQIATVLR 147

Query: 261 HS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                 I + GHTD+ P        NW LS  RA +  +     G+   R++ I G A +
Sbjct: 148 DRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIQAHRMAAI-GRADN 206

Query: 319 RL-KIASD 325
               I +D
Sbjct: 207 FPLIIGND 214



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 19/55 (34%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
          +     D       W I YAD +T LM  FL ++++    +   +          
Sbjct: 16 RHHDGHDNGEQSDRWLISYADLITTLMVLFLALYVLQLAKNSELQIKTLQHRAVK 70


>gi|167589365|ref|ZP_02381753.1| OmpA family domain protein [Burkholderia ubonensis Bu]
          Length = 333

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +   PE+   L ++ ++L  +    + I GHTD          N  LS  RA + 
Sbjct: 231 FDTDKAQVKPESKPQLDEMAKLLTGNPALKVYIVGHTDNQ---GAFARNADLSQKRAEAV 287

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            Q L     ++  R+    G A      ++  D   + NRR++++
Sbjct: 288 AQALASTYRIAPARLVA-KGVASLSPVASNGDDAGRAQNRRVELV 331


>gi|91975492|ref|YP_568151.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91681948|gb|ABE38250.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 217

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 17/188 (9%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             +  ++ ++     +++       S     A    + L  + +              + 
Sbjct: 33  NPNAAQAGEVSAQQIRDQLKGAKTRSLSGARAAVSPEELATVKRISQIRSLSAGDREQMA 92

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRG 270
            +  +     + I+         FD +S+   P     L+ +G+ L  S     ++ + G
Sbjct: 93  AIAAKRPAIDLEIN---------FDYNSAALTPRAEPQLKSLGDALISSDLKDSIVMLAG 143

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329
           HTDA   +     N  LS  RA S  + L+    +  D +  + G+   +LK  SDP+ +
Sbjct: 144 HTDA---KGGDDYNQTLSERRAESVKRYLIDRYSIRPDHLVAV-GYGKKQLKDPSDPLGA 199

Query: 330 ANRRIDIL 337
            NRR+ I+
Sbjct: 200 ENRRVQIV 207


>gi|262197467|ref|YP_003268676.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262080814|gb|ACY16783.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 540

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 63/213 (29%), Gaps = 20/213 (9%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           +  ++R+ E+   +  S   +   +           +      +           I    
Sbjct: 329 QPLVSREQEEINRILFSRRADPDDDGLIGETDECPEESGPPENRGCPDTDADGDTIVDRE 388

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                               +    I   +   F     + L ++  VL+ + +VL    
Sbjct: 389 DNCPTLPTDGRGKAGCPVAYVEGDQIIILDKVHFATDEDVILDDSKPVLEAVAQVLRTRP 448

Query: 264 E--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
           +   + I GHTD    R     N  LS  R  S  Q L+ SGV  +R+    G+ H R  
Sbjct: 449 DIERVRIEGHTD---VRASDAYNLDLSQRRVNSVMQFLIDSGVGAERLEA-KGWGHTRPI 504

Query: 322 IASD----PMNSA----------NRRIDILVED 340
           I       P              NRR++  +  
Sbjct: 505 IDDAHCDRPDEQLDAECTRLTSMNRRVEFHIRR 537


>gi|157960903|ref|YP_001500937.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845903|gb|ABV86402.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 365

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+     +   ++++ E ++      ++I GH   +     A  N  LS  RA + 
Sbjct: 254 FATNSATVQESSYGDIKELAEYMSQHPNAEVTISGHASNT---GKADYNMALSERRAAAV 310

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            ++L+ + GV+  ++S   G+   +  I      +  ANRRI+  V   +
Sbjct: 311 AEILINEYGVASSKVSS-KGYGITQPLIEGSSAEANEANRRIEAHVTGTE 359


>gi|83749098|ref|ZP_00946103.1| Outer membrane protein [Ralstonia solanacearum UW551]
 gi|83724219|gb|EAP71392.1| Outer membrane protein [Ralstonia solanacearum UW551]
          Length = 218

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 15/120 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD + ++  PE    L  +   L + T  + I  GHTD+       + N RLS+ RA
Sbjct: 100 DALFDFNKAVLKPEGKAKLDDLVSKLKNITLKVVIAVGHTDSF---GSDKYNDRLSVRRA 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342
            +    L+  G+  +R+    G    +LK+       +          NRR+++ V   +
Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215


>gi|254236451|ref|ZP_04929774.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
 gi|126168382|gb|EAZ53893.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
          Length = 322

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 179 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 236 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 282


>gi|71892117|ref|YP_277849.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|71796223|gb|AAZ40974.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 175

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 7/125 (5%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDA 274
                +  +    +   N   F              L      L  +  + I I GH D 
Sbjct: 53  RVIDEQIQLKTQELKSNNVIYFPLDQYDIPSNFFYSLNIHANFLYNNPLQHIKIEGHADE 112

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
                    N  L   RA S    L   GV  +++  IS +   +  +   ++   S NR
Sbjct: 113 R---GTPEYNIALGERRANSVKSYLQSKGVLSEQMLTIS-YGKEKPAVLGQNEEAYSKNR 168

Query: 333 RIDIL 337
           R+ ++
Sbjct: 169 RVVLI 173


>gi|119385186|ref|YP_916242.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119374953|gb|ABL70546.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 197

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P+    L+++   +  S   +  I GHTDA   +     N  LS  RA   
Sbjct: 96  FAFDSASIAPDQRPALERMCSAMRQSDVGLFRIVGHTDA---KGSDSYNETLSKLRAEEV 152

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + L++  G++  R+  + G     L   +DP  + NRR++ 
Sbjct: 153 RRWLVQDCGITASRLEAL-GMGKRFLANPADPAAAENRRVEF 193


>gi|153832936|ref|ZP_01985603.1| putative protein F-related protein [Vibrio harveyi HY01]
 gi|148870859|gb|EDL69758.1| putative protein F-related protein [Vibrio harveyi HY01]
          Length = 209

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 10/154 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +    + KK    +S  +  N  +      +   ++I + +Q +   F   S+    ++
Sbjct: 58  AQVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVH---FQTGSARLSAQS 114

Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +Q +G  LA  T+V  +  GH D++     A  N  LS  RA    + L+ + +   
Sbjct: 115 QDWIQSLGHYLAGRTDVDVVIDGHADST---GAASFNDSLSEKRAREVEKQLLATSLPRQ 171

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R+    GF  +  + ++   +    NRR+++++ 
Sbjct: 172 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLM 204


>gi|148652725|ref|YP_001279818.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
 gi|148571809|gb|ABQ93868.1| Peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
          Length = 170

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           R+   F   S     E   +L +    L+   +  + + GHTD       +  N  L   
Sbjct: 65  RSVVRFAFDSYDIDAEAANILDEQVAFLSSHPDARVLVAGHTDER---GSSEYNHALGER 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           RA +    L   G+ + R+  IS +   R   A       S NRR ++
Sbjct: 122 RAQAVRSYLASKGIMDARVETIS-YGEDRPVAAGSDEASYSQNRRAEL 168


>gi|17545619|ref|NP_519021.1| signal peptide protein [Ralstonia solanacearum GMI1000]
 gi|17427912|emb|CAD14602.1| putative outer membrane signal peptide protein [Ralstonia
           solanacearum GMI1000]
 gi|299066867|emb|CBJ38062.1| putative outer membrane protein, ompA domain [Ralstonia
           solanacearum CMR15]
          Length = 218

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 15/120 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++  PE    L  +   L   T  + I  GHTD+       + N RLS+ RA
Sbjct: 100 DALFDFDKAVLKPEGKSKLDDLVSKLKGITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342
            +    L+  G+  +R+    G    +LK+       +          NRR+++ V   +
Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215


>gi|46578466|ref|YP_009274.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46447877|gb|AAS94533.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232394|gb|ADP85248.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
          Length = 364

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 49/161 (30%), Gaps = 13/161 (8%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           D        L  L A                 + I+      +F    +    E   +L 
Sbjct: 81  DAQHDARRDLGPLKATLDGAQGKGVDFFDNGNVQILSIDADVLFGPGETRLSKEGERLLA 140

Query: 254 KIGEVLAHSTEVISIRGHTD----------ASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
                L      + + GH                      +W LSL RA S Y+ L   G
Sbjct: 141 TFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATSVYRALRDLG 200

Query: 304 VSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
           V   R+  + GF     +    +     ANRR+D++++ R 
Sbjct: 201 VPSSRLI-LEGFGDGHPRHDAFTATGRRANRRVDLVLDKRN 240



 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 70/238 (29%), Gaps = 3/238 (1%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
                W + Y+D MT+L+AFF+++  ++  D+  ++ + +        + T S     ++
Sbjct: 14  EGQPGWLLTYSDLMTLLLAFFVLLVSMSTIDERRRRMVIESVFGGIGLMQTGSGEASGDR 73

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
             P      + D   D    K ++D   G       +      I  +         +  L
Sbjct: 74  LVPLTDPDAQHDARRDLGPLKATLDGAQGKGV--DFFDNGNVQILSIDADVLFGPGETRL 131

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           +++ E+       T               P   E+    + +         + S      
Sbjct: 132 SKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATS 191

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTE 264
               ++ +   ++R  +            F            +V+ ++    L     
Sbjct: 192 VYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVDLVLDKRNLAWLQQRQG 249


>gi|313205367|ref|YP_004044024.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312444683|gb|ADQ81039.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 446

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             L+++Q ++    SL         L K+ +++ ++           +++    +  +K 
Sbjct: 244 GVLASTQTTKVTPMSLGVKVGIYFRLAKTREIKIAVELPVITQPAEPAQKTDTVIVSQKI 303

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                  +   +         +    +   T   I+I        F ++S   + E    
Sbjct: 304 DTVSKIVVEQPVIKDPTPIEKEKRTEQPLDTVSTITIN-------FTQNSDKTIHEEADK 356

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L+++ ++L  +      I GHT         ++N R+ L RA S    L+K G    +I 
Sbjct: 357 LKELTDMLKANPNQCLQITGHTCNW---GTRKNNLRIGLRRANSVKSKLIKQGAPAKKIF 413

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILV 338
                      + +        NRR++I V
Sbjct: 414 T-ESKGEAEPLVPNTSEVNRKKNRRVEIKV 442


>gi|167589725|ref|ZP_02382113.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
          Length = 241

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
           +    FD  S+    +    L +          + ++I G+TD++        N RLS  
Sbjct: 133 QGNANFDVDSAKLTLDARRQLDQFLNTNKGVGFQRVTITGYTDST---GSLAHNRRLSES 189

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA S    L   G+   +     G        ++      + NRR++I V
Sbjct: 190 RARSVATYLRTGGLQAAQFVS-EGMGPSDPVASNATADGRAQNRRVEIQV 238


>gi|86139145|ref|ZP_01057715.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
 gi|85823989|gb|EAQ44194.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
          Length = 166

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   P    +LQ     L  + +   +I+GH D          N  L   R
Sbjct: 56  DRVLFLVDQSTLNPAAETILQGQARWLTANPDYTVTIQGHADEQ---GTRIYNLALGERR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A SA + L+  G+S  RI ++  +   R     +++   + NRR
Sbjct: 113 ANSAREYLISQGISSSRI-QVVSYGKERPLEICSAESCYAKNRR 155


>gi|37704600|gb|AAR01572.1| OprF [Pseudomonas sp. MFY30]
 gi|37704670|gb|AAR01607.1| OprF [Pseudomonas sp. MFY234]
          Length = 314

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGHT 267

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314


>gi|212704357|ref|ZP_03312485.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
 gi|212672216|gb|EEB32699.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
          Length = 331

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     + + +L +   ++        +  G TD+         N +LS +RA + 
Sbjct: 231 FAFDSYALDSKAMGILDEAAGLIKSKPNTKIVLTGWTDSR---GSDAYNAKLSKNRAEAV 287

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L K GV   R++ I G      K ++D       NRR +I
Sbjct: 288 KGYLAKQGVPASRMTAI-GKGKSF-KYSNDSEEGRYMNRRTEI 328


>gi|206564091|ref|YP_002234854.1| putative OmpA/MotB family outer membrane protein [Burkholderia
           cenocepacia J2315]
 gi|198040131|emb|CAR56114.1| putative OmpA/MotB family outer membrane protein [Burkholderia
           cenocepacia J2315]
          Length = 169

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +    + + G++D       A  +  LS  R
Sbjct: 62  GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDLELSRRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L   G+   RI  + G         +      + NRR  I+V  R
Sbjct: 119 AEVVAVELADVGLDAKRI-AVVGRGKSDPVGDNKTPVGRAQNRRAAIVVSPR 169


>gi|118588450|ref|ZP_01545859.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
 gi|118439156|gb|EAV45788.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
          Length = 162

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           II+      FD+ S++   E  + ++   + L  + +  + I+GH D             
Sbjct: 40  IINVGRRIYFDQGSAVVTDEARITIENQAKWLNKNKKWLVKIQGHADD---PGSEAAQKT 96

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
           LS  RA +    L+K GVS  R+  + G+   R     D     S NRR+ + + +
Sbjct: 97  LSTQRANAVMAELVKLGVSPKRMW-VKGYGVERPVTDCDQVTCQSQNRRVVVNLRE 151


>gi|308126356|ref|ZP_07663725.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|308109333|gb|EFO46873.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
          Length = 290

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L+       + I GH D          N  +S  RA  
Sbjct: 162 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHADNV---GPRLTNLSVSRLRAQQ 218

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
               L+  GV+ + I ++           ++     + NRR+ + +    
Sbjct: 219 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 267


>gi|206895822|ref|YP_002246694.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
 gi|206738439|gb|ACI17517.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
          Length = 237

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             +      F PP+       M+    + +L   +      +      + +        +
Sbjct: 59  MGVLPSNPTFSPPMPIPPDFIMQGPMTVAELYSNLGGVEKSIQQQYGSEAIEVIEGVNEV 118

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTD-ASPFRNI 280
            + I       +F   S+   PET  +L  +   L         + I GH          
Sbjct: 119 RVRI---SGDLLFMPCSASIRPETSQILSALAPELVKAQKEGYRVYIEGHAAYTLSTCPG 175

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             D++ +S DRA +  +     G+ + ++  + G+  +      +     + NRR++I +
Sbjct: 176 YIDDFHISSDRALNVLERFKSLGLDDSKM-ALVGYGDNVPVGDVNTPQGQAKNRRVEITI 234

Query: 339 EDR 341
              
Sbjct: 235 RRD 237



 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 36/116 (31%), Gaps = 4/116 (3%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              + +      W + Y D +T ++ FF++++  +  +    + +   F       +   
Sbjct: 3   KRKESSGPGAPLWCLSYGDLVTNMLVFFVMLFAFSTLNATKFEQMAYSF----VVALGGG 58

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
            G+               D  +   +T   +   +G   +  Q Q     I  +  
Sbjct: 59  MGVLPSNPTFSPPMPIPPDFIMQGPMTVAELYSNLGGVEKSIQQQYGSEAIEVIEG 114


>gi|146276615|ref|YP_001166774.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145554856|gb|ABP69469.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 182

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F    S         L    + L  + +  I I GH D          N  L   R
Sbjct: 72  DRVFFLVDQSTLNDSARTTLDTQSQWLMANADYAIIIEGHADEQ---GTREYNLALGARR 128

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +    L+  G++  R+  +S +   R           S NRR
Sbjct: 129 ASAVQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEECYSKNRR 171


>gi|300866278|ref|ZP_07110987.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
 gi|300335726|emb|CBN56147.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
          Length = 314

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F+  SS   P T V+L  +   L +     + I GHTD        +DN  LS  
Sbjct: 205 PSDVLFEVGSSALRPGTNVILDNLIADLQNYEGATVRIAGHTDD---AGEVKDNQNLSFA 261

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +  Q L K+   +     I G+   R  + +        NRRI++ +
Sbjct: 262 RAQAVEQYLSKTLGEKYHWVAI-GYGESRPSVENTTEANRQRNRRIEVAI 310


>gi|296329419|ref|ZP_06871912.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153464|gb|EFG94289.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 153

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 3/132 (2%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q L        S  +    +K V    +     ++I+    +  FD   S   P+   
Sbjct: 25  AVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYD 84

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +L  I E +  +   I+I GHTD+         N++LS  RA S    L++ G+SEDRI 
Sbjct: 85  LLNNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIV 141

Query: 311 KISGFAHHRLKI 322
            I      +   
Sbjct: 142 GIEAMGEEQPIA 153


>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 368

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 17/121 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F+ + +   P     L  +   +        V ++ GHTD          N  LS 
Sbjct: 246 SDVLFEFNKATLKPAASQALDNLFSQIVAANPKDGVATVIGHTDRI---GSDAYNQALSE 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN----------SANRRIDILVE 339
            RA S    L+  G+  D++ ++ G         ++  +          + +RR+++ +E
Sbjct: 303 QRARSVADYLIAKGLFADKV-RVEGRGKSSPITGNNCSSGSKPALIACLAPDRRVEVRLE 361

Query: 340 D 340
            
Sbjct: 362 G 362


>gi|120603950|ref|YP_968350.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120564179|gb|ABM29923.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
          Length = 364

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 13/129 (10%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD----------AS 275
           + I+      +F    +    E   +L      L      + + GH              
Sbjct: 113 VQILSIDADVLFGPGETRLSKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRL 172

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
                   +W LSL RA S Y+ L   GV   R+  + GF     +    +     ANRR
Sbjct: 173 RAEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLI-LEGFGDGHPRHDAFTATGRRANRR 231

Query: 334 IDILVEDRQ 342
           +D++++ R 
Sbjct: 232 VDLVLDKRN 240



 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 71/238 (29%), Gaps = 3/238 (1%)

Query: 28  NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87
                W + Y+D MT+L+AFF+++  ++  D+  ++ + +        + T S     ++
Sbjct: 14  EGQPGWLLTYSDLMTLLLAFFVLLVSMSTIDERRRRMVIESVFGGIGLMQTGSGEASGDR 73

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
             P  +   + D   D    K ++D   G       +      I  +         +  L
Sbjct: 74  LVPLTAPDAQHDARRDLGPLKATLDGAQGKGV--DFFDNGSVQILSIDADVLFGPGETRL 131

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           +++ E+       T               P   E+    + +         + S      
Sbjct: 132 SKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATS 191

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTE 264
               ++ +   ++R  +            F            +V+ ++    L     
Sbjct: 192 VYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVDLVLDKRNLAWLQQRQG 249


>gi|262369227|ref|ZP_06062555.1| outer membrane protein A [Acinetobacter johnsonii SH046]
 gi|262315295|gb|EEY96334.1| outer membrane protein A [Acinetobacter johnsonii SH046]
          Length = 348

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +        N RLSL RA
Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 291

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            S    L+ +  V   R+S   GFA  +    ++       NRR+
Sbjct: 292 NSVKSSLVNEYNVDPARLST-QGFAWDQPIADNNTKEGRAMNRRV 335


>gi|167570798|ref|ZP_02363672.1| ompA family protein [Burkholderia oklahomensis C6786]
          Length = 224

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214


>gi|19881375|gb|AAM00930.1|AF491822_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGEE 344


>gi|78059690|ref|YP_366265.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77964240|gb|ABB05621.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 167

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    PE   +LQ   + L       I I+G+TD       +  N  L   R+ + 
Sbjct: 66  FDFDSYEVKPEYQSLLQAHADYLRLHPGRHILIQGNTDER---GTSEYNLALGERRSQAV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            + L   GV + +I  +S F   +       +   + NRR DI+
Sbjct: 123 LRTLETLGVPDAQIEAVS-FGKEKPVALGHDEASWAQNRRADIV 165


>gi|308270508|emb|CBX27120.1| hypothetical protein N47_A11490 [uncultured Desulfobacterium sp.]
          Length = 200

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268
            + +  +       + I      +  ++ K  ++  P++  ++  I + +       I++
Sbjct: 72  KLEQKTIDTLFSEALSIQPKQPFHFILYFKKDTLLTPDSNKLIPDIIKSIQERNSTDITV 131

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
            GHTD          N  LS  RA S   +L+  GV  + I+  S        I ++   
Sbjct: 132 VGHTDTL---GSKDYNMALSRKRADSVKDLLIDQGVEANNINTTS-HGKENPLIKTEDNV 187

Query: 328 -NSANRRIDILVE 339
               NRR++++V 
Sbjct: 188 SEPGNRRVEVIVR 200


>gi|50083922|ref|YP_045432.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter sp. ADP1]
 gi|49529898|emb|CAG67610.1| putative Outer membrane protein precursor (OmpA-like)
           [Acinetobacter sp. ADP1]
          Length = 355

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +      + N RLSL RA
Sbjct: 233 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNT---GPRKLNERLSLARA 289

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  +   R+    GFA  +    +        NRR+   +   +
Sbjct: 290 NSVKSALVNEYNIDPARL-ATQGFAWDQPIADNSTKEGRAMNRRVFATITGSR 341


>gi|42522223|ref|NP_967603.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574754|emb|CAE78596.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
           HD100]
          Length = 168

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S     +   +    E +  +    + I GH D+         N  L   RA + 
Sbjct: 66  FGYDKSSLDASSKKDIATNVEWMKANPSVRVQIEGHCDSR---GTIEYNVALGERRANAV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              ++  G++ DR+S IS +   +     D     + NRR + +
Sbjct: 123 KAYMVSLGIAADRLSTIS-YGKEKPLETGDTEAAWAKNRRANFV 165


>gi|332521031|ref|ZP_08397491.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332043561|gb|EGI79757.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 638

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 13/161 (8%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K +A K     ++L   I   +   +A  +           G  + ++   N   FD   
Sbjct: 474 KAVASKEGYEPEELKYSIDPEIKLDLALKLNLTPEKRAAEVGTDLFVLLDLNPIYFDFDK 533

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S   P+  V LQK+   L     V I ++ HTD+         N  LS  R  S    ++
Sbjct: 534 SYIRPDAQVELQKVINYLNEYPSVSIDVQSHTDSR---GRDAYNKSLSQRRNTSTKNWII 590

Query: 301 KSG-VSEDRISKISGFAHHRLKI--AS-----DPMNSANRR 333
           + G +S+ RI    G+   +L    ++     +  +  NRR
Sbjct: 591 EKGKISKSRI-SGRGYGETQLVNRCSNGVKCSEEEHQQNRR 630


>gi|134277521|ref|ZP_01764236.1| OmpA family protein [Burkholderia pseudomallei 305]
 gi|134251171|gb|EBA51250.1| OmpA family protein [Burkholderia pseudomallei 305]
          Length = 224

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214


>gi|237756911|ref|ZP_04585384.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690932|gb|EEP60067.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 260

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS    E +  L  + + L    +  + I+G+TD        + N +L+L RA + 
Sbjct: 155 FYSNSSKIKKEYLPYLNVVAKYLKTHPDVKVKIKGYTDNI---GSKKYNDKLALKRAEAV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            Q L+K GVS +RI  I G       ++++       NRR +  +
Sbjct: 212 KQYLIKLGVSPNRIM-IDGVGKSEYIVSNNNELDRFTNRRAEFYI 255


>gi|242278716|ref|YP_002990845.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242121610|gb|ACS79306.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 400

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 17/178 (9%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +        PP +   I      ++ Q +AK  +   +     +  +    ++    I +
Sbjct: 232 MPNMVQMQSPPQNGNTIPQSTPTQQEQPVAKHATPKAAPAPVQSTTQAPKAQSKPRSINL 291

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARD 283
           ++        FD  SS   PE+  +L ++G+ L       + I I GHTD+         
Sbjct: 292 AVQ-------FDVDSSQIKPESYSLLNELGKALISDRLKDKRIVIGGHTDSD---ASPEY 341

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N++LS +RA S  + L  +  ++  RI   +GF      + +    +   NRR+ + +
Sbjct: 342 NFKLSKERAESVKKYLTDNFPIAPQRIGT-TGFGESNPLVPNTTKYNKLLNRRVQVSI 398


>gi|7532784|gb|AAF63228.1| outer membrane protein [Acinetobacter sp.]
          Length = 368

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +        N RLSL RA
Sbjct: 250 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 306

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    ++       NRR+   +   +
Sbjct: 307 NSVKSSLVNEYNVDASRLST-QGFAWDQPIADNNTKEGRAMNRRVFATITGSR 358


>gi|129141|sp|P04845|OMPA_SERMA RecName: Full=Outer membrane protein A; Flags: Precursor
 gi|758300|emb|CAA25254.1| ompA protein [Serratia marcescens]
          Length = 359

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 27/135 (20%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S    E    L ++   L+        + + G+TDA       + N +LS
Sbjct: 229 KSDVLFNFNKSTLKAEGQQALDQLYTQLSSMDPKDGSVVVLGYTDAV---GSDQYNQKLS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA---------NRRID 335
             RA S    L+  G+  D+IS   G         +        +          +RR++
Sbjct: 286 EQRAQSVVDYLVSKGIPSDKISA-RGMGEADAVTGNTCGYKSGRATKAQIVCLAPDRRVE 344

Query: 336 I-------LVEDRQG 343
           I       +V   QG
Sbjct: 345 IEVKGIKDVVTQPQG 359


>gi|58422897|gb|AAW73248.1| OmpA [Citrobacter freundii]
          Length = 222

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N  LS
Sbjct: 114 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 170

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
             RA S    L+  G+  D+IS   G         +
Sbjct: 171 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGN 205


>gi|296447841|ref|ZP_06889753.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
 gi|296254641|gb|EFH01756.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
          Length = 209

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           + +           P+S+    A           + +          ++   V   T   
Sbjct: 27  VAQDAATFVKALSQPVSRSISAAPSVMPEHIAQEQFVQGLGKRSANRSL--TVSEVTQID 84

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRN 279
            I+ +  +      F  +S+        V++++G  L           I GHTDA     
Sbjct: 85  EIVATRREIDFEVNFALNSADLRDSDRKVVEQLGVALGEPALKGGTFLIMGHTDAR---G 141

Query: 280 IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            A+ N +LS  RA +  +VL+ + GV+ +R+  + G+    LK  +D   S NRR+ ++
Sbjct: 142 SAKLNQKLSERRANAVKKVLVAEYGVAPERLVAV-GYGQTHLKNPNDGFASENRRVQVV 199


>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
 gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
           [Pectobacterium wasabiae WPP163]
          Length = 361

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +    E    L ++   L+        + + G TD        + N  LS
Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQALS 289

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  +++S   G    +        +    +A       +RR++I 
Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348

Query: 338 VED 340
           V+ 
Sbjct: 349 VKG 351


>gi|144899936|emb|CAM76800.1| OmpA/MotB [Magnetospirillum gryphiswaldense MSR-1]
          Length = 220

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 70/169 (41%), Gaps = 18/169 (10%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
               ++ ++++ ++++   +          V   T   G+++++       MF   S+  
Sbjct: 58  KQPPQRPIENMRQELTQAAA--TVQGSDDAVDVGTDDRGVVMNL---DAGAMFTPGSADI 112

Query: 245 LPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM 300
            P  + +L+++   L           I+GHTD++P +      N+ L+  RA +  +  +
Sbjct: 113 KPTMVPLLKELAGTLNQPRFDNYRLEIQGHTDSTPVKTAQFPSNFDLASARALATMRAFV 172

Query: 301 KSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341
             GV+E ++  ++ +     ++ +            + NRR+ I +  R
Sbjct: 173 SLGVAESKMI-VAAYGQFAPRVPNTLEDGTPLPANQALNRRVAIHIYPR 220



 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 45/161 (27%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
              +     SW   Y D +T+L+ FF+++  I+  D    + ++                
Sbjct: 6   KKQSQEVDSSWMETYGDMVTLLLCFFILLASISKVDSVIYEKVQSGMTSEIGKQPPQRPI 65

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
               Q   + ++  +      +  T +   +              +     +   ++   
Sbjct: 66  ENMRQELTQAAATVQGSDDAVDVGTDDRGVVMNLDAGAMFTPGSADIKPTMVPLLKELAG 125

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
             N    D+ + +    +        +  + F    ++   
Sbjct: 126 TLNQPRFDNYRLEIQGHTDSTPVKTAQFPSNFDLASARALA 166


>gi|114570660|ref|YP_757340.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114341122|gb|ABI66402.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 304

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + +  +F   S + LP++   L  + ++L       + + GHTD          N  LS 
Sbjct: 196 RVDGLLFAHDSDVLLPDSATALTALRDLLTERPSLTLYVVGHTD---MSGSLTYNMSLSE 252

Query: 290 DRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            RA S    L++  G+  DR++   G      + ++   +    NRR++I+
Sbjct: 253 RRAASVVTALVEDYGIRMDRLTAA-GVGPLAPEASNGTDDGRTLNRRVEIV 302


>gi|332290760|ref|YP_004429369.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168846|gb|AEE18101.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 648

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             N   F+       P+  V L K+   +       I +R HTD+         N  LS 
Sbjct: 534 DLNPIYFNFDKYDIRPDAEVELAKVLVYMETYPSVRIDVRSHTDSR---GRDAYNLNLSQ 590

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           +R  S    L+  G+S  R+    G+   +L          S   +  NRR + +V  
Sbjct: 591 NRNVSTRDWLISKGISASRL-TGKGYGETQLVNDCGNGVRCSKDQHQLNRRSEFIVLS 647


>gi|241667271|ref|ZP_04754849.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254875822|ref|ZP_05248532.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254841843|gb|EET20257.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 418

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA------RDNWRLSL 289
           FD  S     +   +L K+   L    T   +IRG+      + +         N RLS 
Sbjct: 71  FDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNILTEYNIRLSK 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +RA S  + L++ G+ ++    I    +      +D     + N+R++I ++ R
Sbjct: 131 NRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEITLKSR 184


>gi|228471058|ref|ZP_04055893.1| OmpA family protein [Porphyromonas uenonis 60-3]
 gi|228307180|gb|EEK16217.1| OmpA family protein [Porphyromonas uenonis 60-3]
          Length = 348

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I    N   F +  +    E   VL  + +++  + +  + I GHT           N R
Sbjct: 241 IEKDFNAAKFVQGKADLTDEAKFVLHDLAKLMEANPDLKLKIEGHTSEE---GDEAFNQR 297

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           LS +RA  A   L+  G+S DR+    G         S+P    NRR + +V
Sbjct: 298 LSEERAQVAVDFLISQGISADRLQA-EGKGSSEPIDPSNPD--VNRRTEFIV 346


>gi|227538215|ref|ZP_03968264.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241924|gb|EEI91939.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 650

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D + S   P+   VL ++   +  +    I +  HTD+         N +LS  R
Sbjct: 538 DNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSR---GSDSYNMKLSDRR 594

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A SA + ++  G++++R+    G+   +L          ++  + ANRR ++ V  
Sbjct: 595 AKSAVEYIISKGIAKERLVS-KGYGESKLVNECANGVKCTEEQHQANRRTEVKVLK 649


>gi|167626696|ref|YP_001677196.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596697|gb|ABZ86695.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 418

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA------RDNWRLSL 289
           FD  S     +   +L K+   L    T   +IRG+      + +         N RLS 
Sbjct: 71  FDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNILTEYNIRLSK 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +RA S  + L++ G+ ++    I    +      +D     + N+R++I ++ R
Sbjct: 131 NRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEITLKSR 184


>gi|167648617|ref|YP_001686280.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167351047|gb|ABZ73782.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 401

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 68/275 (24%), Gaps = 7/275 (2%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
             ++     L   +   +           N++D+S     +     +  G+   +     
Sbjct: 129 DSWSLMVNVLYDFAPDSWINPYLGAGVGINRLDVSALGQFSGVPGPINAGNPAIQNLTVD 188

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
             +          +        +     +          +             + K  ++
Sbjct: 189 DNDMAVAWQAIAGASIKATDKLKVDVTYRWFATQDQAWNATGSHLLQTGNFEGQYKDQSL 248

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
               R    +                              +   +     F     +  P
Sbjct: 249 TVGLRYSFASPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAYEAREFIVYFPFDQYVLTP 308

Query: 247 ETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           E   V+ +      +     + + GHTD        + N +LS  RA +    L+ +GV+
Sbjct: 309 EAQSVVSEAANYATSGHATKLVVVGHTDT---SGSPKYNAKLSERRAKAVADALVGAGVA 365

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            D +  +         +A+        NRR  I +
Sbjct: 366 ADAL-AVDWKGESAPAVATGDGVKEPLNRRSTISI 399


>gi|294675945|ref|YP_003576560.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294474765|gb|ADE84153.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 739

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ SS+   PE    L  + + +A   +    + GHTD+         N +LS  RA + 
Sbjct: 498 FEPSSATIKPEDGPKLDALAKAMAQCQDFRMEVAGHTDSQ---GSDEGNRKLSQARAEAV 554

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILVEDRQ 342
              L    V   R     G+   +    +D        RRI+ ++ D +
Sbjct: 555 ITALSARRVL-TRNLTPKGYGESQPIAENDTDKGREATRRIEFVLLDAK 602


>gi|312115989|ref|YP_004013585.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221118|gb|ADP72486.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 169

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+   P+   +L      L   T   I+I GH D          N  L   RA +   
Sbjct: 62  TDSAELSPDGQQILNAQAVWLRQYTNFPITIEGHADER---GTREYNIALGAKRAETTKN 118

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            L+  G+S  RI  IS +   R           S NRR  + V +  G
Sbjct: 119 FLIAQGISPQRIRTIS-YGKERPVAVCDDISCWSQNRRT-VTVLEGGG 164


>gi|269119253|ref|YP_003307430.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
 gi|268613131|gb|ACZ07499.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
          Length = 366

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 26/143 (18%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----- 267
             V+       I  ++    +   FD   +         ++   + + +  +  +     
Sbjct: 206 PIVVTPEKPAPIGKTMDLTVSGAYFDFDKATVKENAKQEIRGAAQQIKNLNQNNNLTGVL 265

Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-----SGVSEDRISKISGFAHHRLK 321
            I GHTD+   +     N +LS  RA +   V  +     +G+  +    ++G+   R  
Sbjct: 266 DIAGHTDS---KGAKEYNQKLSERRAAAVADVYTQVIGTGNGIRYN----VAGYGEDRPV 318

Query: 322 IASD--------PMNSANRRIDI 336
             +            + NRR+++
Sbjct: 319 APNTLPNGKDNPEGRARNRRVEV 341


>gi|71282015|ref|YP_270145.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
 gi|71147755|gb|AAZ28228.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
          Length = 291

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 90/300 (30%), Gaps = 21/300 (7%)

Query: 44  LMAFFLVMWII--NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101
           +  +FLV+  +  +    D K  I QY      +    S     +     +  +      
Sbjct: 1   MSTYFLVIASLVTSLLASDVKAGIRQYSADIHTSKWQLSDDSRLQCTLSHQIPRYGEARF 60

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
             +   K +++ ++        Y   E      +    +     +  +  ++        
Sbjct: 61  SAKASRKLNMEFELDMMLLPDNYSLAEVRSVAPNWQPGTGSRTLANMKLHKQFNPSLPKK 120

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
                +++ E    P        + + K  +     +                       
Sbjct: 121 VAWTMLSELEQGMSPTFYYNDWYSEQDKISVGLSTARFKKAYRDF----------VGCVG 170

Query: 222 TGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFR 278
             +  S  D   T + +  SS      +   ++ I + L+     E++ I  ++D+    
Sbjct: 171 NLLNYSFDDIAYTVLNYQSSSDKFTKASQRRIEMIRQYLSLDPELELVLIDAYSDSY--- 227

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
                N +LS  RA       +++G+   RI    G+   R   ++D       NRR+ I
Sbjct: 228 GGRWSNLKLSERRAAKIRDYFVENGIEVSRIEA-KGYGEKRHISSNDTTLGRGKNRRVVI 286


>gi|220913721|ref|YP_002489030.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
 gi|219860599|gb|ACL40941.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
          Length = 266

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 11/210 (5%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +  + +  +NSL             T     +  ++            LA+K   +L  L
Sbjct: 45  DQAKFDKLRNSLATGFGAVASQTADTASGTVVPPDQVNKDAEAFSSLDLAIKEVDKLTAL 104

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +++ + L       +   V F+ +  G+ + ++   +   F             VL  I
Sbjct: 105 QQQMETALKA---QQLDSNVEFQISERGLTVKLV--GSQAFFLPDRPELTRRASQVLDTI 159

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314
              LA +   I + GH  A+         W LS  R+ +  + L+   GV+  RI  ++ 
Sbjct: 160 SPTLAPAGLEIMVEGH--AANGITAFPSTWELSSARSVNVLRYLVDRGGVAPGRIGAVA- 216

Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           F   R             NRR+D++V   +
Sbjct: 217 FGSARQVNDDSTEELMELNRRVDVVVLSDK 246



 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 5/168 (2%)

Query: 17  IKKKVAIDDTP---NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
           +K++      P   +    W   Y D +TVLM  F+V++ ++  D      +        
Sbjct: 1   MKRRRRGGHEPEEEHVDERWMASYMDMVTVLMCMFIVLFAMSTVDQAKFDKLRNSLATGF 60

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
             +  AS+             Q   D      +     ++   +  Q++    L+     
Sbjct: 61  GAV--ASQTADTASGTVVPPDQVNKDAEAFSSLDLAIKEVDKLTALQQQMETALKAQQLD 118

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            +   Q      ++     +   L    +L +  ++  +   P L+  
Sbjct: 119 SNVEFQISERGLTVKLVGSQAFFLPDRPELTRRASQVLDTISPTLAPA 166


>gi|188579997|ref|YP_001923442.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
 gi|179343495|gb|ACB78907.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
          Length = 282

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 10/207 (4%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                   +  R +   +         +     E         E++ A         + +
Sbjct: 32  AMGAVLALAPARANPLTEVPGTRPPAAEGEAGTEAPPPRDEVAERVEAGAVNPSANAIIR 91

Query: 198 KISSTLSGLVADNIVKG-VLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKI 255
            ++    G          V        + +      + T  F   S+   PE  + L+ +
Sbjct: 92  SLAPFADGNPGRPAAPVAVSPGDGGPSLRVDPARSVDLTVFFAYDSARLTPEARIQLEPL 151

Query: 256 GEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311
           G+ L           I GHTDA         N RLSL RA +    L +  G+   R+ +
Sbjct: 152 GQALQSRELAGHGFLIAGHTDA---AGGLGYNRRLSLARARAVRAHLAETYGIDPHRL-R 207

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338
           I G+   R K  + P    NRR+++ +
Sbjct: 208 IHGWGPGRPKDPARPFARINRRVEVSL 234


>gi|262276102|ref|ZP_06053911.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
           hollisae CIP 101886]
 gi|262219910|gb|EEY71226.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
           hollisae CIP 101886]
          Length = 173

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           I  + + Q  T  F       LP+   +L    E L  + ++  +  GH D         
Sbjct: 60  IRNNELRQSQTVYFSFDDYSVLPQFEDMLDAHAEFLRANADIKVVVEGHADER---GTPE 116

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            N  L   RA +  + L   GV   +IS +S +   +  +     ++   NRR  ++
Sbjct: 117 YNIALGERRANAVAKYLQALGVPSSQISIVS-YGEEKPLVLGQGEDAYSKNRRAVLV 172


>gi|126664268|ref|ZP_01735260.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
 gi|126623800|gb|EAZ94496.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
          Length = 635

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            + +  +  +     ++ T    +   + + V      T +        +   FD     
Sbjct: 476 ASKEEYETSEKPFGPVTETGKSEINIELKRNVFPIQVGTDLAKLF--NISIIYFDLDKWD 533

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              +    L+KI  V+    E+   IR HTD+         N  LS  RA +  + ++KS
Sbjct: 534 IRQDAAEDLEKIISVMNQYPEMTIDIRSHTDSRQTH---AYNELLSDRRAKATLEFMVKS 590

Query: 303 GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           G++ +R++   G+   +L          S+  +  NRR + +V  
Sbjct: 591 GINRNRLTA-KGYGETQLVNECSDGVLCSEEDHQKNRRSEFIVMK 634


>gi|91228645|ref|ZP_01262561.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
 gi|91187796|gb|EAS74112.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
          Length = 204

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283
           + S  + +   +F   S +  P     + ++ + L       I I+G+   +     A  
Sbjct: 72  VDSSQEMQIRVLFANDSDVINPIFTQQILELSDFLKEYPNTSIEIQGYASRT---GTAEH 128

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340
           N  LS  RA +  + LMK+G+S DR+  I G+               ++ NRR+   V  
Sbjct: 129 NLDLSKRRAENVRKELMKNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 186

Query: 341 RQG 343
            +G
Sbjct: 187 HKG 189


>gi|167035318|ref|YP_001670549.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166861806|gb|ABZ00214.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 308

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I + +     V  I   GH+D          N  LS  RA +
Sbjct: 179 FPGGGTELDASARARLDVILDYMKADPTVNHIELDGHSDN---SGNRLTNRDLSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
                   GV+E++I  +         + ++     + NRR++I ++ 
Sbjct: 236 VADYFKAHGVAEEQII-VRFHGEQYPLVKNNSAANRARNRRVNIELDR 282


>gi|27904776|ref|NP_777902.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
           str. Bp (Baizongia pistaciae)]
 gi|46396115|sp|Q89AJ5|PAL_BUCBP RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|27904174|gb|AAO27007.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
           str. Bp (Baizongia pistaciae)]
          Length = 173

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 7/144 (4%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             + +        +  +   F        +  + + NT  F  ++     +    L  + 
Sbjct: 32  NNVDTFYEQETNKSKQQLTNFSEDNFDETLEKLKKGNTIYFPFNNHQVNSKYAKNLNDLA 91

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + L H +     I GHTD+       + N  L   RA S    L   GVS  +I+ +S +
Sbjct: 92  QFLCHHSNQKIMIEGHTDSR---GTNKYNMYLGQKRADSVKLYLESKGVSNQQITTVS-Y 147

Query: 316 AHHRLKIASDPMN--SANRRIDIL 337
              +     +  N  S NRR  I+
Sbjct: 148 GSSKPVAHGNKENSYSKNRRSVII 171


>gi|327404809|ref|YP_004345647.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320317|gb|AEA44809.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 454

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +S    PE+  VL++I   L+ +    + I GHTD+         N  LS  RA +
Sbjct: 351 LFASNSDQLKPESYGVLKEIATALSENPAVRVKIVGHTDSD---GEESFNAELSKKRALA 407

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             Q L+    +   R+    G   +    ++      + NRR++ L
Sbjct: 408 VKQALISEFKIEASRMET-DGKGENEPTDSNATSVGKANNRRVEFL 452


>gi|294676664|ref|YP_003577279.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294475484|gb|ADE84872.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 185

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   S+         LQ+        +    I GHTD+         N RLS  RA + 
Sbjct: 87  LFATDSTKLTASGRGYLQQFFTTAQARS--FIITGHTDSR---ASDEYNMRLSKGRAEAV 141

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             V  + G     +  ++ +     K  +      + NRR++++
Sbjct: 142 AGVAQQVGAP---VLAVNWYGERMPKATNATAAGMAQNRRVEVI 182


>gi|260574902|ref|ZP_05842904.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259022907|gb|EEW26201.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 328

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++     +   LQ + + L    +    + GHTDA         N  LS  RA S 
Sbjct: 223 FSSGTAALAEGSYASLQALADYLKAHPDRAIAVVGHTDA---SGPLAVNIALSRKRAASV 279

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            QVL+ S GV   ++    G      + ++      + NRR+++++   Q
Sbjct: 280 RQVLIDSLGVPATQVIA-EGVGFLVPRASNLTEAGRAQNRRVEVMLTSTQ 328


>gi|256019218|ref|ZP_05433083.1| outer membrane protein A [Shigella sp. D9]
          Length = 109

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 244 PLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              + +  L  +   L        I + GHTD          N  LS  RA +  Q L+ 
Sbjct: 1   MSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRL---GSEDYNLTLSRKRAETVRQYLIA 57

Query: 302 SGVSEDRISKISGFAHHRLK----IASDPMN-----SANRRIDILVED 340
            G+  ++I+ I G    +        +D  +       NRR+++ V+ 
Sbjct: 58  KGLPAEKITSI-GMGKSQPVKKCKYNNDRASLIVCLQPNRRVEVEVDG 104


>gi|83643990|ref|YP_432425.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83632033|gb|ABC28000.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 327

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 8/141 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +      + +  V  E    G+            FD   +   PE+   L +I +++ 
Sbjct: 189 QVVESAPMQSGMVKVDAEAMAKGLDAEGHIALYGVYFDTDKADIKPESAETLAEIAKLMK 248

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318
                 + I GHTD          N  LS  RA +    L+    +  +R++ + G    
Sbjct: 249 SQPSLKVLIVGHTDN---AGALDYNRSLSERRAKAVMDALVSQYKIGAERMTAL-GVGMA 304

Query: 319 RLKIASDPMN--SANRRIDIL 337
               +++     + NRR++++
Sbjct: 305 APVASNENEAGKAKNRRVELV 325


>gi|225849664|ref|YP_002729898.1| OmpA/MotB [Persephonella marina EX-H1]
 gi|225646381|gb|ACO04567.1| OmpA/MotB [Persephonella marina EX-H1]
          Length = 286

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+        E +  L  I + L       + I G+TD+         N RL+  RA + 
Sbjct: 181 FEFDKYQIKKEYLPYLNVISKYLKSKPNLKVKIVGYTDSI---GSKSYNDRLAYKRALAV 237

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + L+K G+  +RI +I G       + +        NRR D  V +
Sbjct: 238 KEYLIKQGIPAERI-EIVGRGKENYLVDNKTWLNRFTNRRADFFVME 283


>gi|124002133|ref|ZP_01686987.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
 gi|123992599|gb|EAY31944.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
          Length = 617

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
              F    +    +++   + +   L ++  V I + GHTD         +N  LS  RA
Sbjct: 508 RVFFMYKKAEMHKKSLPAAKALLTFLKNNPGVSIEVSGHTDDV---GSNSNNVALSQQRA 564

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              Y  L+  G+ ++R+ K  G+      I ++   +   NRR D  V  
Sbjct: 565 NVVYNWLVSKGIEKERLVK-KGYGAKVPIIPNETNYARIVNRRTDFRVVS 613


>gi|264677754|ref|YP_003277660.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|299529322|ref|ZP_07042761.1| OmpA/MotB [Comamonas testosteroni S44]
 gi|262208266|gb|ACY32364.1| OmpA/MotB [Comamonas testosteroni CNB-2]
 gi|298722700|gb|EFI63618.1| OmpA/MotB [Comamonas testosteroni S44]
          Length = 175

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  S     +    ++   + +  +    + + GHTD          N  L   R
Sbjct: 70  RIVYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDER---GGREYNLALGQKR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           A +  + L   GV++ ++  +S +   +        +  + NRR++I
Sbjct: 127 AEAVRRSLGLLGVNDAQVEAVS-YGKEKPAAEGHSEDAYAQNRRVEI 172


>gi|149191535|ref|ZP_01869782.1| protein F-related protein [Vibrio shilonii AK1]
 gi|148834609|gb|EDL51599.1| protein F-related protein [Vibrio shilonii AK1]
          Length = 208

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+ S  +     S T        L  +   E  +   E    P ++   +     + R 
Sbjct: 10  VLAASLLTGCSAVSSTTSKLFPDMLQTAPKSEFDVMHPEWADAPKIASTSVQGPYGQMRT 69

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +      +     LV + +   +        ++I +  + +   F+  S+     +   L
Sbjct: 70  ES----WNVLERYLVNNGLDYEL---VPGDYVMIRLKQKIH---FNTGSAHVASTSAQWL 119

Query: 253 QKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           Q++   L+    +  + G HTD +        N +LS  RA S  Q L+   V   +I  
Sbjct: 120 QQLASFLSGQQGIDVVIGGHTDNT---GTVAINDKLSDKRAESVRQTLISQRV-PRQIIY 175

Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338
             G+  +  +  +      + NRR+++ +
Sbjct: 176 TRGYGENVPECTNQTQYGKACNRRVELTL 204


>gi|21243867|ref|NP_643449.1| outer membrane protein P6 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109468|gb|AAM37985.1| outer membrane protein P6 precursor [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 181

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 72  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     +++   S NRR++I+
Sbjct: 129 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 177


>gi|296156473|ref|ZP_06839311.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295893072|gb|EFG72852.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 233

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 9/169 (5%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            L K+ +LE    +         +     +           K++ + L+ L      + +
Sbjct: 52  QLAKTRELEIKALERHALTEAASAGNAQPSNAMPSAPDVSKKRLLALLAPLQD---KRQI 108

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDA 274
                  G+ I+I  +    +F+   +  LPE+  VL +I  VL       I + GHTD 
Sbjct: 109 AISNAAQGVEIAINAK---ILFNSGDARLLPESFEVLNQIAGVLRDRSKNNILVEGHTDN 165

Query: 275 SPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            P        NW LS  RA +  +     G+   R++ I G A +   I
Sbjct: 166 VPISTAKYESNWELSSARAGAVVRFFADKGIEAHRMAAI-GRADNFPLI 213



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%)

Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
           ++    G W I YAD +T LM  FL ++++        +      +   +     +   
Sbjct: 21 GESEEQSGRWLISYADLITTLMVLFLALYVLQLAKTRELEIKALERHALTEAASAGNAQP 80

Query: 84 FDEQNPPERSSQN 96
           +        S+ 
Sbjct: 81 SNAMPSAPDVSKK 93


>gi|254473105|ref|ZP_05086503.1| OmpA/MotB [Pseudovibrio sp. JE062]
 gi|211957826|gb|EEA93028.1| OmpA/MotB [Pseudovibrio sp. JE062]
          Length = 160

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F  + S        VL K  + L H     I+I GH D        + N  L   R
Sbjct: 53  DRVFFLNNQSSLDGAARGVLDKQAQWLQHYKNYSITIEGHADER---GTRQYNIALGARR 109

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           A +  + L+  G+S  RI  IS +   R     +     S NRR  + V + Q
Sbjct: 110 AAAVREYLVAKGISPSRIKTIS-YGKERPVAVCNAASCWSQNRRA-VTVLNGQ 160


>gi|170693033|ref|ZP_02884194.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170142031|gb|EDT10198.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 259

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 48/171 (28%), Gaps = 17/171 (9%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++  K ++  A          +  +               +         +F    S  
Sbjct: 93  QVQFDKNMRVSATYWRDPQCADLMSDAAPVAPAPVAAKPAALEQFTFEGEALFPFGKSSL 152

Query: 245 L---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
               P     L    E +        I + GHTD          N  LS  RA +    L
Sbjct: 153 NSMLPRGRAELDAAIEKIRKEDGVTRIDVVGHTDRI---GSDESNRALSQARAETVKAYL 209

Query: 300 MKSGVSEDRISKISGFAHHRLKI---ASDPMN-----SANRRIDILVEDRQ 342
           +  G+  +RI + SG    +        +          +RR+ I +  ++
Sbjct: 210 VAHGLDAERI-RASGAGSSQPVSHCPPGETPAVIACLQKDRRVTIAIYGQR 259


>gi|78358627|ref|YP_390076.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221032|gb|ABB40381.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 306

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 17/155 (10%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L  L+ ++    + F+      ++SI D     +F   S + LP  I VL +I   L 
Sbjct: 90  QPLKDLIWEDPDSDLNFQQNSMVQILSINDA---VLFRPGSFVLLPGGIKVLDRILPWLL 146

Query: 261 HSTEVISIRGHTDASPFRNIARD-----------NWRLSLDRAYSAYQVLMKSGVSEDRI 309
                + + GHT                       WRLS  R  + Y+ L   G+  + +
Sbjct: 147 RVEHPLLLAGHTATQRAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENL 206

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             +  FAH+R +           N R+DI+++ R 
Sbjct: 207 K-VEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN 240



 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 35/104 (33%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I ++D MT+++ FF+++  ++  D+  K  +             +     ++      
Sbjct: 17  WLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIGSGSFNPHAEDGANRIV 76

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                   S+++      +  +   ++   Q   +   +     
Sbjct: 77  EPGPMQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDA 120


>gi|85710723|ref|ZP_01041787.1| probable peptidoglycan-associated lipoprotein precursor
           [Erythrobacter sp. NAP1]
 gi|85687901|gb|EAQ27906.1| probable peptidoglycan-associated lipoprotein precursor
           [Erythrobacter sp. NAP1]
          Length = 210

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD             LQ   +  A   +   +I GH D          N  L   RA +A
Sbjct: 108 FDTDRFNIDSTDAAALQAQAQYFARFPQLTFTIEGHCDER---GTREYNLALGERRANAA 164

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR-IDILV 338
              L+  GVS +RI  +S +   R    +    +   NRR   I++
Sbjct: 165 KNYLVSLGVSPNRIRTVS-YGKERPVALASTPAAWSQNRRAASIII 209


>gi|114319403|ref|YP_741086.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225797|gb|ABI55596.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 184

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            R T  FD   S    E + V++     L+   +    I GHTD          N  L  
Sbjct: 76  SRQTVYFDFDRSEIRNEDMPVIEAHARFLSGHPDRRMTIEGHTDER---GSREYNLALGE 132

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +  ++++ +GV ED++ +++ +         +++     NRR +++
Sbjct: 133 RRAEAVKRIMVLNGVDEDQL-EVTSYGEENPVALGSNEEAWQQNRRAELI 181


>gi|313835693|gb|EFS73407.1| OmpA family protein [Propionibacterium acnes HL037PA2]
 gi|314928364|gb|EFS92195.1| OmpA family protein [Propionibacterium acnes HL044PA1]
 gi|314970216|gb|EFT14314.1| OmpA family protein [Propionibacterium acnes HL037PA3]
          Length = 115

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ ++ +       +  I + G+TD          N  L
Sbjct: 4   DLDASVLFDLDSDVVKPAGRQIIDRMVKQFVARKVSGKIGVTGYTDN---SGSVAHNLDL 60

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  ++L   +  GV+       +G        ++D       NRR+ I V++
Sbjct: 61  SRRRAVSVARLLGLQLSKGVT----LVTAGKGEADPVASNDSEAGRRLNRRVTITVKE 114


>gi|167841641|ref|ZP_02468325.1| ompA family protein [Burkholderia thailandensis MSMB43]
          Length = 224

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAILKPAGKQKLDELASKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214


>gi|152996217|ref|YP_001341052.1| peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
 gi|150837141|gb|ABR71117.1| Peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
          Length = 192

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 9/175 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--TRTGI 224
           I           S          ++    A+           D +   ++ E   T    
Sbjct: 19  IAGCSTTATDTDSSTVAEDANSTEQTNGAAENTDQAFGAGQGDAMTSVIVEEEVTTNDNG 78

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283
           + S+   +    FD   SI  PE+   L K  E L    +   +  GH D          
Sbjct: 79  MDSLAGVQTVFYFDFDKSIVRPESREALAKHAEYLVSHPDARIVLEGHADER---GTREY 135

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           N  L   RA +  + L   GV+  +I  +S F                 NRR+++
Sbjct: 136 NMALGERRAKAISRYLTIQGVAASQIETVS-FGEEVPVAFGHDSNAWQLNRRVEV 189


>gi|89889916|ref|ZP_01201427.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
 gi|89518189|gb|EAS20845.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
          Length = 318

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 222 TGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFR 278
             +   I        F     +     E    + K+   L    +   I  GHTD +   
Sbjct: 200 DNLAADIRANPLILHFATGASTINLSNEQREKISKMVHYLDARPQASLISVGHTDNT--- 256

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
                N  +S +RA  A   L+++G+S  RI   SG         +D       NRR+ +
Sbjct: 257 GSRSTNTTISANRAEFAKSYLVENGISSSRIES-SGKGPDEPIATNDTEEGKEQNRRVVV 315

Query: 337 LVE 339
            ++
Sbjct: 316 TLK 318


>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
 gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
           [Dickeya dadantii Ech703]
          Length = 354

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N  LS
Sbjct: 226 KSDVLFNFNKATLKPEGQRSLDQLYTQLSTIDPKDGSVVVLGFTDRL---GSDQYNQTLS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  GV  ++IS   G            A+    +A       +RR++I 
Sbjct: 283 TKRAQSVVDYLVHKGVPANKISA-RGMGKANPVSGATCANVKARAALIDCLAPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|229895607|ref|ZP_04510778.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis Pestoides A]
 gi|229701413|gb|EEO89441.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis Pestoides A]
          Length = 560

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 10/114 (8%)

Query: 235 PMFDKSSSIPL-PETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           P+FD +S+          +      L   +  + I I GH+D +     +  N  LS  R
Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNT---GSSSMNMALSEQR 496

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +    L+K   ++ D      G         +        NRR+++L+   Q
Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549


>gi|119094108|gb|ABL60938.1| flagellar motor protein MotB [uncultured marine bacterium
           HF10_19P19]
          Length = 110

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 8/91 (8%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77
            P    +W   +AD  T+LMAFF+++      +    K I                    
Sbjct: 20  PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLRNAFGVQKVVPIVEQP 79

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
             +  +    +P    S           + +
Sbjct: 80  KGTTVLSLNFSPSPSKSVTNEMTQQTTQVNQ 110


>gi|22125427|ref|NP_668850.1| hypothetical protein y1530 [Yersinia pestis KIM 10]
 gi|45442357|ref|NP_993896.1| hypothetical protein YP_2580 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808138|ref|YP_652054.1| hypothetical protein YPA_2144 [Yersinia pestis Antiqua]
 gi|108811590|ref|YP_647357.1| hypothetical protein YPN_1427 [Yersinia pestis Nepal516]
 gi|145599338|ref|YP_001163414.1| hypothetical protein YPDSF_2062 [Yersinia pestis Pestoides F]
 gi|149365180|ref|ZP_01887215.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|162421467|ref|YP_001607103.1| OmpA domain-containing protein [Yersinia pestis Angola]
 gi|165926917|ref|ZP_02222749.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939224|ref|ZP_02227774.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011145|ref|ZP_02232043.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212522|ref|ZP_02238557.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398614|ref|ZP_02304138.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421232|ref|ZP_02312985.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424634|ref|ZP_02316387.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467871|ref|ZP_02332575.1| OmpA domain protein [Yersinia pestis FV-1]
 gi|218930004|ref|YP_002347879.1| hypothetical protein YPO2953 [Yersinia pestis CO92]
 gi|229838541|ref|ZP_04458700.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229899106|ref|ZP_04514249.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901867|ref|ZP_04516988.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis Nepal516]
 gi|270490053|ref|ZP_06207127.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294504711|ref|YP_003568773.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
 gi|21958316|gb|AAM85101.1|AE013756_2 hypothetical [Yersinia pestis KIM 10]
 gi|45437221|gb|AAS62773.1| putative membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108775238|gb|ABG17757.1| membrane protein [Yersinia pestis Nepal516]
 gi|108780051|gb|ABG14109.1| putative membrane protein [Yersinia pestis Antiqua]
 gi|115348615|emb|CAL21559.1| putative membrane protein [Yersinia pestis CO92]
 gi|145211034|gb|ABP40441.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149291593|gb|EDM41667.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|162354282|gb|ABX88230.1| OmpA domain protein [Yersinia pestis Angola]
 gi|165912824|gb|EDR31451.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921268|gb|EDR38492.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989823|gb|EDR42124.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206453|gb|EDR50933.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960721|gb|EDR56742.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051118|gb|EDR62526.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167056516|gb|EDR66285.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680763|gb|EEO76858.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis Nepal516]
 gi|229687508|gb|EEO79581.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229694907|gb|EEO84954.1| putative OMPA family outer membrane porin precursor [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|262362773|gb|ACY59494.1| hypothetical protein YPD4_2587 [Yersinia pestis D106004]
 gi|262366698|gb|ACY63255.1| hypothetical protein YPD8_2582 [Yersinia pestis D182038]
 gi|270338557|gb|EFA49334.1| OmpA family protein [Yersinia pestis KIM D27]
 gi|294355170|gb|ADE65511.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
 gi|320014496|gb|ADV98067.1| putative OMPA family outer membrane porinprecursor [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 560

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 10/114 (8%)

Query: 235 PMFDKSSSIPL-PETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           P+FD +S+          +      L   +  + I I GH+D +     +  N  LS  R
Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNT---GSSSMNMALSEQR 496

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +    L+K   ++ D      G         +        NRR+++L+   Q
Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549


>gi|146301688|ref|YP_001196279.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146156106|gb|ABQ06960.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 653

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
             +   FD           V L KI  V+    ++   IR HTD+    + A+ N  LS 
Sbjct: 539 NISMIYFDLGKWNITDAAAVELGKILAVMQEYPKMRIDIRSHTDSR---SSAKSNLVLSD 595

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S    L+  G+   R+ +  G+   +L          S+  +  NRR + ++
Sbjct: 596 KRAKSIMAWLVSKGIDAKRL-RGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMI 650


>gi|78358672|ref|YP_390121.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78221077|gb|ABB40426.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 177

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F+        E   +L+   E L    +  + I G+ D          N  L   R
Sbjct: 71  NVVYFEFDKFDLKAEGKELLKGKAEALKAYPQLRVLIEGNCDER---GTQEYNLALGERR 127

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
           A +A++ L+  GV  D++  +S +   R  ++  ++   + NRR +  +
Sbjct: 128 ARAAFEYLVLLGVRPDQLEIVS-YGEERPAVSGNNEAAWAKNRRAEFKL 175


>gi|303256189|ref|ZP_07342205.1| peptidoglycan-associated outer-membrane lipoprotein
           [Burkholderiales bacterium 1_1_47]
 gi|331001245|ref|ZP_08324871.1| peptidoglycan-associated lipoprotein [Parasutterella
           excrementihominis YIT 11859]
 gi|302860918|gb|EFL83993.1| peptidoglycan-associated outer-membrane lipoprotein
           [Burkholderiales bacterium 1_1_47]
 gi|329568972|gb|EGG50768.1| peptidoglycan-associated lipoprotein [Parasutterella
           excrementihominis YIT 11859]
          Length = 163

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    P+ + V+    + LA      + + G+TD          N  L   RA + 
Sbjct: 59  FDFDSYTVSPDQMPVVTNHAQFLAAHKNLNVRLEGNTDER---GGREYNLALGQKRAEAV 115

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
            + +   GVS  +I  IS +   + K       +   NRR+DI
Sbjct: 116 KERMTLLGVSPQQIETIS-YGKEKPKAEGHDEAAYYENRRVDI 157


>gi|255530025|ref|YP_003090397.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343009|gb|ACU02335.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 585

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           ++++ +    I+   +     N  + +  +     I +          +D +      + 
Sbjct: 435 ERQVTNSPVLIAKEPTDPGTLNKKEFLQTKENNKPIRLE------NIYYDFNKWDIRADA 488

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              L+K+ +++  ++   I +  HTD+         N+ LS  RA SA   ++  G+ ++
Sbjct: 489 AAELEKLVQIMKDNSRIWIELGSHTDSR---GNDAYNFTLSQKRAESAVTYMISRGIEKN 545

Query: 308 RISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           RI    G+    L          ++  +  NRR +  +  
Sbjct: 546 RIEA-RGYGETLLLNRCANGIKCTEEEHQLNRRTEFKITA 584


>gi|171319658|ref|ZP_02908751.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MEX-5]
 gi|171095111|gb|EDT40119.1| type IV / VI secretion system protein, DotU family [Burkholderia
           ambifaria MEX-5]
          Length = 404

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 12/162 (7%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A +R   L  LA+ +   L   VA   V+ +    + T  L      R   MF    + 
Sbjct: 250 KAPRRALPLDALARNLEQRLRDEVAAGNVELIRAPGSDTLTL------RFGGMFAPGDAA 303

Query: 244 PLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLM 300
             P    V+   G  +A  T    + + G+ D++  R+     N  LS  RA    Q+L+
Sbjct: 304 VAPWGASVVASAGREIAVLTNSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILV 363

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            + VS   I  + G         +      + NRR+++ + D
Sbjct: 364 SADVSAPHI-SVEGNGDADSLADNGTAAGRARNRRVEVTITD 404


>gi|153837358|ref|ZP_01990025.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
 gi|308094490|ref|ZP_05889709.2| OmpA family protein [Vibrio parahaemolyticus AN-5034]
 gi|149749273|gb|EDM60052.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
 gi|308090642|gb|EFO40337.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
          Length = 225

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G  L  +      +   E  +           + +  R  +      ++L   +  + + 
Sbjct: 43  GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQTARAAEKKSNNVTSLEMFLDRHNIP 102

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
                     ++I + +Q +   F   S+     +   L+K+G  LA  T+V  +  GH 
Sbjct: 103 HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 157

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D++     A  N  LS  RA    + ++ S +   R+    GF  +  + ++   +    
Sbjct: 158 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 213

Query: 331 NRRIDILVEDRQ 342
           NRR+++++   +
Sbjct: 214 NRRVELMLIVDE 225


>gi|71083303|ref|YP_266022.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062416|gb|AAZ21419.1| OmpA family [Candidatus Pelagibacter ubique HTCC1062]
          Length = 159

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
            +   F  + ++    +   L+K    L  ++++  +  GH D          N  L   
Sbjct: 52  PDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADER---GTREYNLALGER 108

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           RA SA   LM  G+S +RI  +  +   R     ++    S NRR
Sbjct: 109 RANSAKDYLMTYGISSERI-SVLSYGKERPVDSGSNPLAWSKNRR 152


>gi|261253024|ref|ZP_05945597.1| outer membrane protein [Vibrio orientalis CIP 102891]
 gi|260936415|gb|EEX92404.1| outer membrane protein [Vibrio orientalis CIP 102891]
          Length = 279

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+   P+ +  L +   +L    +  +++ GH D+         N  L++ RA   
Sbjct: 160 FAFNSTEINPKYMGHLAEASNILKQHPQFHLAVTGHADSV---GDVSYNQELAMGRAQQV 216

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            + L   G+S  RI               D       NRR+ I V D +
Sbjct: 217 KRYLTIFGLSPSRIQT-KSVGDTLPLYEGDSDGVRLTNRRVSIEVIDTE 264


>gi|17545455|ref|NP_518857.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum GMI1000]
 gi|17427747|emb|CAD14266.1| probable peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum GMI1000]
          Length = 172

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 67  KRSVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + + +   +   + NRR DI+
Sbjct: 124 RAEAVRRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 171


>gi|94987344|ref|YP_595277.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731593|emb|CAJ54956.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 340

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S         +L++   ++  + +    + G TD++        N RLS +RA + 
Sbjct: 239 FAFDSFALDDTAKAILEETVRLIRANPDFNVRLLGWTDST---GPDAYNLRLSQERADAV 295

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L+K G+  +R+    G      +  +        NRR +++
Sbjct: 296 KNFLVKMGIPSNRLFA-KGMGKSY-QYNNATKEGRYMNRRTELV 337


>gi|332995422|gb|AEF05477.1| OmpA/MotB [Alteromonas sp. SN2]
          Length = 393

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD  SS+        + +  E +   T   ++  GHT A         N  LS DRA
Sbjct: 279 RVLFDNESSVVKAPRDPEISEFAEFMKQYTNTTAVIEGHTSA---PGSEAYNMDLSEDRA 335

Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
            S  +V++    +   R+  + G+   RL     +   +  NRRI + V+D
Sbjct: 336 ASFKEVMVDMYDIDASRLETV-GYGETRLLDTAKNAEAHRVNRRISVTVKD 385


>gi|323492645|ref|ZP_08097789.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
 gi|323313020|gb|EGA66140.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 9/118 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPET--IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           +    N   FD  S     E       Q+I  +L    E  + + GHTDA      A  N
Sbjct: 202 LQKPTNAIYFDTDSYAIDGEWVVEKKAQRIICLLRKYPESKVDLIGHTDAE---GTADYN 258

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             LS  RA +    LM   +++++I  + G    +   ++      + NRR+++ ++ 
Sbjct: 259 QNLSEHRAQAVANWLMTKDIAQEQI-SLQGVGDTQPASSNLTPESRALNRRVEMELKG 315


>gi|118593012|ref|ZP_01550399.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614]
 gi|118434319|gb|EAV40973.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614]
          Length = 192

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 8/156 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              ++ +   A ++       V          +      L S+        F   S+   
Sbjct: 36  QGAQQEVNISADELQKAAIENVEKYPGANSPQQLPLAAKLASLRQFNLEITFHFDSATIA 95

Query: 246 PETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           P +   +  I + L       +   I GHTDA   +     N  LS+ RA +    L+ +
Sbjct: 96  PASYETVGLIADALHTPYLQGQTFFIVGHTDA---KGTREYNLELSIKRAEAVRDALVTT 152

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             V  + +  + G    +L+  S+P  + NRR+ ++
Sbjct: 153 FQVPAEYLFAV-GLGEEQLRDPSNPDAAVNRRVQLI 187


>gi|91786415|ref|YP_547367.1| hypothetical protein Bpro_0505 [Polaromonas sp. JS666]
 gi|91695640|gb|ABE42469.1| OmpA/MotB [Polaromonas sp. JS666]
          Length = 220

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 10/178 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           ++     F+  L    ++ M     L+   +K        +A      +   T R  +  
Sbjct: 25  MSGLLGAFVLILVGVLVVQMDLMANLEAEVQKRRVEEQRRIALEKALAIPLATGRVTLNN 84

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF---RN 279
             I    + +F  +S    P+  ++L+ +   L            + G TD  P      
Sbjct: 85  GRIGISGSVLFPLNSDQLRPDGRLLLKSLVPPLQVYLGERDELLMVSGFTDDKPIQEGNQ 144

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335
              DN  LS  RA +  + L++ G+   R    + F   +   ++  +   + NRR++
Sbjct: 145 RFADNLALSAQRALTVTRALIEEGMPSSRAFAAA-FGAEQPVASNTDEKGRALNRRVE 201


>gi|317503691|ref|ZP_07961708.1| OmpA family protein [Prevotella salivae DSM 15606]
 gi|315665212|gb|EFV04862.1| OmpA family protein [Prevotella salivae DSM 15606]
          Length = 683

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D + +   PE+   L  +  +L  +    I I  H D   +R  A  N
Sbjct: 511 ITAPVLIDNIFYDFNKATLRPESTAALDDLVALLNENPHVTIEISAHCD---YRGSAEYN 567

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            RLS  RA +  + L+  G+S DR++ + G+   R K+
Sbjct: 568 LRLSQQRAENVVRYLISKGISADRLTAV-GYGKQRPKV 604


>gi|170738630|ref|YP_001767285.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
 gi|168192904|gb|ACA14851.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
          Length = 168

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+         L K  + L+        I GH D          N+ L   R
Sbjct: 58  DRVFFETDSTDLTATATATLDKQAQWLSRYPRYTFLIEGHADER---GTREYNFSLGARR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343
           + +    L   G++  R+  +S +   R     +D    S NRR   +++   G
Sbjct: 115 SQAVRDYLTSRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRRAVTVLDGGAG 167


>gi|114766590|ref|ZP_01445546.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
 gi|114541206|gb|EAU44258.1| OmpA family protein [Roseovarius sp. HTCC2601]
          Length = 194

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F        P+    L++     + +     I GHTDA         N RLS +RA +  
Sbjct: 97  FATDKYYISPKGKARLEEFFN--SATAFGFIIAGHTDAR---ASIEYNRRLSYNRANAVA 151

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              +  G +  RI  + G+        +  +   + NRR++IL
Sbjct: 152 S--VARG-TGARIIDVRGYGEEYPVATNRTVEGMAKNRRVEIL 191


>gi|332993983|gb|AEF04038.1| sodium-type flagellar protein MotY [Alteromonas sp. SN2]
          Length = 292

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
            + K+S+     +   L  IGE L   +++  +   G+TD+        +N +LS+ RA 
Sbjct: 187 SYQKNSTELTKYSQKRLTMIGEYLKEDSDLELVLLDGYTDSY---GGRWNNEQLSIRRAN 243

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                L   GV +DRI +++G    R    +D     + NRR+ + +
Sbjct: 244 EVKSYLTTIGVPDDRI-QLTGHGEKRHIANNDTRESRAQNRRVVVRL 289


>gi|163747526|ref|ZP_02154876.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
 gi|161379204|gb|EDQ03623.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
          Length = 191

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F         +    L    +     +    I GHTD+         N RLS +RA S 
Sbjct: 93  FFATDKYNISAQGRARLANFFQSTGAVS--YIITGHTDSR---ASDAYNMRLSYNRANSV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             V  + G    RI+ + G+      + ++     + NRR++I+
Sbjct: 148 AHVANQVG---ARIADVRGYGERMPAVPNNSAANMAKNRRVEII 188


>gi|317048541|ref|YP_004116189.1| DotU family type IV / VI secretion system protein [Pantoea sp.
           At-9b]
 gi|316950158|gb|ADU69633.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
           At-9b]
          Length = 404

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F    ++       +L  +   +      + +  +TD SP       ++  S  RA + 
Sbjct: 287 LFAADGTVVNQVGRALLAHVASAMKTVKGTVLVSVYTDNSPVDGRFVSSYEFSFARARAI 346

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            Q+L    ++E    K  G       + +D     + NRR++I +
Sbjct: 347 AQLLNPQ-LAEGHSVKAEGRGDSNPLLPNDSNENRARNRRVEITL 390


>gi|37704672|gb|AAR01608.1| OprF [Pseudomonas sp. MFY245]
          Length = 314

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+    +   ++ + + +       + + GHT
Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTTTTVEGHT 267

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314


>gi|73542264|ref|YP_296784.1| OmpA/MotB [Ralstonia eutropha JMP134]
 gi|72119677|gb|AAZ61940.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 218

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L   T  + I  GHTD+       + N RLS+ RA S
Sbjct: 102 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 158

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPM----NSANRRIDILVEDRQ 342
               L+  GV  +R+    G    +LK+       +          NRR+++ V   +
Sbjct: 159 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGTR 215


>gi|260900780|ref|ZP_05909175.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308108014|gb|EFO45554.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
          Length = 205

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S    P     ++++ + L       I ++G+   +     +  N  LS  RA
Sbjct: 82  RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
            +  + L+++G++ DR+  I G+        +       + NRR+   V   +G
Sbjct: 139 ENVRKALLQNGIAPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190


>gi|238897411|ref|YP_002923088.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465166|gb|ACQ66940.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 173

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD 273
           V     R    I  + + +   FD       P    +L    + L  + +  + I GHTD
Sbjct: 51  VSSADERARAQIEGLQKTSVVYFDFDKYNIKPNFAEILNAHADFLLNNPSFKVDIEGHTD 110

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN 331
                  +  N  L   RA +    L   GVS  ++S +S +   +      +    S N
Sbjct: 111 Q---SGTSEYNMALGERRANAVKMYLQGKGVSAQQMSIVS-YGKEKPVYRGNNKEDYSQN 166

Query: 332 RRIDIL 337
           RR  ++
Sbjct: 167 RRAVLI 172


>gi|170720302|ref|YP_001747990.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169758305|gb|ACA71621.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 324

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I + L        I + GH+D          N   S  RA +
Sbjct: 179 FPGGGIDLDAAARARLDVILDYLQADPTVNHIELNGHSDN---SGNRLTNRDTSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
               L   GV E++I  +           ++     + NRR++I ++ 
Sbjct: 236 VADYLKAHGVPEEQI-TVRFHGERYPLAKNNSAANRARNRRVNIELDR 282


>gi|145298281|ref|YP_001141122.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|1332434|emb|CAA63036.1| outer membrane protein [Aeromonas salmonicida]
 gi|142851053|gb|ABO89374.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|1588798|prf||2209353A major outer membrane protein OmpAI
          Length = 339

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F         E +  L  + + +           + G+TD          N +LS
Sbjct: 215 NSDVLFAFGKDSLKAEGVEALNSLYQQIVDFQPKDGSAVVVGYTDRI---GSDAYNQKLS 271

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA +    L+  G++  ++  + G         +  D + +          +RR++I 
Sbjct: 272 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGNKCDGVKAKAQLISCLAPDRRVEIR 330

Query: 338 VEDRQ 342
           V   Q
Sbjct: 331 VSGVQ 335


>gi|126741160|ref|ZP_01756841.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
 gi|126717797|gb|EBA14518.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
          Length = 140

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD  S+    +    L  +   +   T     I GHTD+      A+ N RLSL RA
Sbjct: 36  QISFDFDSATLRSDQKPKLANMCTSMKAMTGTVFQIIGHTDS---SGSAKYNERLSLLRA 92

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
               + L+ S GV+E+ +  I G         +DP    NRR++ 
Sbjct: 93  QEVRRHLISSCGVAENSLRAI-GMGETAPFNQNDPRADENRRVEF 136


>gi|170749438|ref|YP_001755698.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170655960|gb|ACB25015.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 269

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291
             F   S+   PE  + L+ +GE L           I GHTDA         N RLSL R
Sbjct: 118 VFFAYDSARLTPEARIQLEPLGEALRAQPLAGHAFLIAGHTDA---AGGRAYNRRLSLAR 174

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           A +    L++  G++ +R+ ++ G+   R K    P++  NRR+++ +
Sbjct: 175 ARAVKAHLVETYGLAPERL-RVHGWGPARPKDPDAPLSRVNRRVEVSL 221


>gi|59714347|ref|YP_207122.1| outer membrane porin F [Vibrio fischeri ES114]
 gi|197336792|ref|YP_002158803.1| outer membrane porin F [Vibrio fischeri MJ11]
 gi|59482595|gb|AAW88234.1| outer membrane porin F [Vibrio fischeri ES114]
 gi|197314044|gb|ACH63493.1| outer membrane porin F [Vibrio fischeri MJ11]
          Length = 202

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   SS   P     ++ + E L    E  I ++G          A  N RLS  RA +
Sbjct: 81  LFANDSSEISPIFKTEIRTMAEFLEEYPETSIQLQGFASQQ---GNAEYNIRLSELRAAA 137

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
               L++ GV   RI  I GF    L    D    ++ NRR+   V   +G
Sbjct: 138 VRVALIEYGVDPQRIETI-GFGDTLLTAKGDSAVSHALNRRVVATVVGFKG 187


>gi|57505872|ref|ZP_00371797.1| probable periplasmic protein Cj0599 [Campylobacter upsaliensis
           RM3195]
 gi|57015902|gb|EAL52691.1| probable periplasmic protein Cj0599 [Campylobacter upsaliensis
           RM3195]
          Length = 313

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 106/326 (32%), Gaps = 47/326 (14%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
            +       W I YAD M  L+  F+ + +I A         +       +NL T    +
Sbjct: 2   KNNKEEGNFW-IAYADLMAGLL--FIFILLIGAI-VVKYVLTQSDLKIIKENLNTQEANL 57

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
              +   +        LS + + T N+++L                         Q    
Sbjct: 58  ELSKQALKDKESIVFQLSKELNATANTLNLI----------------------HTQKTEL 95

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           +N+++  S+  K+     D +  I   +        K      K  K   +    I   L
Sbjct: 96  ENNISTLSKDLKNNIDEKDRQILILLNQIELKEKELKAIQQDFKEAKERVENLSFIRENL 155

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK--------- 254
           S  +   + + +  +     I +         +FDK S I   E  + L+K         
Sbjct: 156 SKELQKKLDENISIDQKTGAISL-----PAEVLFDKDSFILKDEAKISLKKILSGYLTGI 210

Query: 255 -IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISK 311
              E ++ + E I I GHTD+         N  LS  RAY     +      E   ++  
Sbjct: 211 LDDENISKNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMSFIYSFYKDERLQKLLM 267

Query: 312 ISGFAHHRLKIASDPMN-SANRRIDI 336
            SG +     + +   +   +RRI+I
Sbjct: 268 ASGRSFSVPILKNGVEDKDLSRRIEI 293


>gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 342

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD   +   PE   VLQ+       +      +  HTD       A+ N  LS 
Sbjct: 235 KNYIVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTD---LSGSAKYNQALSE 291

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            R  +    L + G+   +I  +         + +        NRR++I++
Sbjct: 292 KRGAAVKAQLEQLGIPASQIV-VVAKGKSSPMVPTPDGVREPQNRRVEIVL 341


>gi|303248654|ref|ZP_07334908.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
           JJ]
 gi|302489910|gb|EFL49836.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
           JJ]
          Length = 171

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    E+  +L +  E++    ++   + G+ D       A  N  L   RA +A
Sbjct: 69  FAFDSSNLTAESRQILTRKAEIMRQYPQIKVIVEGNCDQR---GTAEYNLALGERRAQAA 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            Q L   G+  DR+S +S +   R           + NRR + 
Sbjct: 126 AQYLSNLGIPADRLSTVS-YGKERPLDPGHSEAAYAKNRRDEF 167


>gi|118581722|ref|YP_902972.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504432|gb|ABL00915.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 180

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 8/165 (4%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
            S E + A +                        V+    E T      ++    +   F
Sbjct: 18  ASNEVVKAEEPVVAPAQTEAPAVEVTQPAAPAAPVEAPKVEETAKADSEAVAAAFDVAYF 77

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           D   S    +    L K  +++  +     + I GH D       A  N  L   RA SA
Sbjct: 78  DFDKSDLRQDARDALSKNADIMLKTNTAANVKIEGHCDER---GSAEYNMALGERRAKSA 134

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
            Q L+  GV   R+S +S +   +      ++   + NRR + +V
Sbjct: 135 LQYLLTLGVPSQRLSIVS-YGEEKPAAQGGNEEAWAKNRRTEFVV 178


>gi|94497343|ref|ZP_01303914.1| OmpA/MotB [Sphingomonas sp. SKA58]
 gi|94423206|gb|EAT08236.1| OmpA/MotB [Sphingomonas sp. SKA58]
          Length = 358

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   P+   +L       +      + + GH D       A  N  LS  
Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSSCGSAQVMLAGHADK---SGSASYNVGLSQR 303

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           RA S    L   G+ +  +     F   R ++ +        NRR++I 
Sbjct: 304 RADSVKAYLASKGIPDG-VMTTEAFGESRPRVETADGVREVQNRRVEIT 351


>gi|296282332|ref|ZP_06860330.1| putative outer membrane lipoprotein [Citromicrobium bathyomarinum
           JL354]
          Length = 238

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F++SS+  +P +  +L ++   +      +++I GHTD        + N  LS DRA   
Sbjct: 123 FEESSAEFIPGSEELLDELATAMRPCVGAIVAISGHTDT---SGSPKVNLALSQDRAQMV 179

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            + L++ G+    +   +GF   R      P + ANRRI+  V  
Sbjct: 180 RRELIERGIPGQNLIA-NGFGSSRPVEGLSPADPANRRIEFRVVS 223


>gi|114765941|ref|ZP_01444955.1| OmpA/MotB domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114541755|gb|EAU44793.1| OmpA/MotB domain protein [Roseovarius sp. HTCC2601]
          Length = 248

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 67/234 (28%), Gaps = 18/234 (7%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
              K   +    S   + +  +L       + S   E         S             
Sbjct: 27  QRQKQVFEEAETSGLGQTRGLKLITVQDVTAESAAPEVAATEPAAPSAPELQQTAPQVAT 86

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +                  +    +R  D  + + +  S           +F      +
Sbjct: 87  TAPELAAPSGSGQGVSISASSDSAPQRPADPNRPLLAAASDAPM-------VFGQLAPEL 139

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARD 283
            +++  +     F   S+    +    LQ +   L A     I I GHTD+         
Sbjct: 140 QVNLHIE-----FGFDSAAISDDQKPKLQTVCMALMAADVGKIRIVGHTDS---AGSDAY 191

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           N  LS+ RA    + L++  G+   R+  + G         ++P    NRR++ 
Sbjct: 192 NETLSVLRAKEVARNLIEECGLPPSRLETV-GMGERFPFNEANPRADENRRVEF 244


>gi|262377497|ref|ZP_06070719.1| outer membrane protein [Acinetobacter lwoffii SH145]
 gi|262307553|gb|EEY88694.1| outer membrane protein [Acinetobacter lwoffii SH145]
          Length = 352

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L         I GHTD +        N RLSL RA
Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 291

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S    L+ +  V   R+S   GFA  +    ++       NRR+   +   +
Sbjct: 292 NSVKSSLVNEYNVDASRLST-QGFAWDQPIADNNTKEGRAMNRRVFATITGSR 343


>gi|92113977|ref|YP_573905.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91797067|gb|ABE59206.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 177

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           ++ T  F        PE   VL    E L        +  GH D          N  L  
Sbjct: 71  EQRTIYFAFDRDTIRPEFESVLSAHAEYLQSHPNTNVVLEGHADER---GTREYNLGLGE 127

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +  Q L   GVS  +I  +S +   R  +        + NRR+  
Sbjct: 128 RRARAVEQYLTVEGVSASQIEIVS-YGEERPAVRGHDEESYAQNRRVVF 175


>gi|77464239|ref|YP_353743.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126463081|ref|YP_001044195.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|221640123|ref|YP_002526385.1| OmpA domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|332559128|ref|ZP_08413450.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
 gi|77388657|gb|ABA79842.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104745|gb|ABN77423.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17029]
 gi|221160904|gb|ACM01884.1| OmpA domain protein precursor [Rhodobacter sphaeroides KD131]
 gi|332276840|gb|EGJ22155.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
          Length = 182

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F    S         L    + L  + +  I I GH D          N  L   R
Sbjct: 72  DRVFFTVDQSTLNDAARATLDTQSQWLMSNADYAIIIEGHADEQ---GTREYNLALGARR 128

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +    L+  G++  R+  +S +   R           S NRR
Sbjct: 129 ASAVQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEACYSKNRR 171


>gi|262038728|ref|ZP_06012088.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
           F0264]
 gi|261747280|gb|EEY34759.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
           F0264]
          Length = 362

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F     +P       L  I  V+    +  +I   GHTD++        N +LS+ RA +
Sbjct: 246 FKVDGRVPNQAEAKDLGTIANVINQFADGGTIDFVGHTDST---GSNAYNQKLSVARAQN 302

Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             ++L + G+        I+G    +    ++ +     NRR+++  ++
Sbjct: 303 VARLLREYGLKNSISYGTITGKGESQPADTNNTVQGRYNNRRVELFFQN 351


>gi|149915621|ref|ZP_01904147.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
 gi|149810513|gb|EDM70356.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
          Length = 171

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E   VL    + L  + +  ++  GH D          N  L   R
Sbjct: 61  DRVLFAVDQSTLSSEAQAVLDGQAQWLMTNIDYSAVIEGHADEQ---GTREYNLALGARR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  G++ +R+  +S +   R     +++   + NRR
Sbjct: 118 ANAVQEYLVSRGIAGNRLKVVS-YGKERPIELCSNEACYAKNRR 160


>gi|152995560|ref|YP_001340395.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150836484|gb|ABR70460.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 296

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 75/298 (25%), Gaps = 22/298 (7%)

Query: 48  FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           FL+   +  T      AI  Y +    +    S  IF         +  +     +    
Sbjct: 13  FLLAIGMPFT---QANAITHYQSGISDSEWLLSGDIFSCSLTHPVPNYGEGHFIKEAGEP 69

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
              +           Q   +     +    +                +   +  +   + 
Sbjct: 70  MKFILQPQNEKLGPGQVYIISQAPDWSPGLKPETLEVLPYPGYGLTVEVGGRVAERMLT- 128

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
                  L       +     +   + +   +S+       +   + +          I 
Sbjct: 129 ------SLDRGRHPVVAGTAWENNRETIEVGLSNINFAPAYNEFRRCLSSLLPVNYDQI- 181

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNW 285
               R   +F  +           L  +   ++     E I I GHTD        RDN 
Sbjct: 182 ---ARTAALFPTNGVNLTDRIKARLDLVALYVSSDPSVEYIYIDGHTD---VIGSRRDNR 235

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
            LS  RA      L++ GV   +I              ++       NRR+ I +E  
Sbjct: 236 ELSKVRAEKVTSYLLEKGVPAGKIIS-RYHGERYPSTTNNTAQGRERNRRVTIRLEKS 292


>gi|78186498|ref|YP_374541.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like [Chlorobium luteolum DSM 273]
 gi|78166400|gb|ABB23498.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Chlorobium luteolum DSM
           273]
          Length = 154

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S    + +  L+     + A+ ++ + + GH D          N  L   R
Sbjct: 49  GDVFFDFDQSALRMDAVSQLKNNAAWMDANRSKRVIVEGHCDER---GTNEYNMALGERR 105

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA + ++  G+S +RI  +S +   +     +++   + NRR
Sbjct: 106 ASSAKEYIVSLGISPERIETLS-YGEEKPFAQGSTEEAWAQNRR 148


>gi|325285434|ref|YP_004261224.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324320888|gb|ADY28353.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 645

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q +T  FD +     P+  + +QK+   +       I +  HTD+         N  LS 
Sbjct: 532 QLSTIYFDLNKFDIRPDAEIEIQKVIVAMEKFPSLKIKVNSHTDSR---GKDSYNLWLSQ 588

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338
            RA +    ++  G+   R+ +  GF   +L    +         +  NRR + ++
Sbjct: 589 KRAEATVNYMISKGIDASRL-QGEGFGETKLVNKCENGVPCTVKEHQLNRRSEFII 643


>gi|119471346|ref|ZP_01613818.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
 gi|119445622|gb|EAW26906.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
          Length = 1559

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEV----LAHSTE-VISIRGHTDASPFRNIAR 282
           + D      F  +S     +    + +  E     L  +    +++ GHT          
Sbjct: 552 VKDVVIEGTFSLNSEQVTDDYRNTILQQSEAVIKALKQNESLKVTVAGHTCDI---GNYD 608

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            N  LS  RA +   +L+ ++G+ E RI ++ G  + +  I +  +   + NRR+ I
Sbjct: 609 YNMALSERRAEAVKHILVTQAGIDEARI-EVLGLGYAQPLINNKDEASRAQNRRVHI 664


>gi|302877290|ref|YP_003845854.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302580079|gb|ADL54090.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 217

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIG---EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +FD   +   PE   VL +       L   T  + I GH D        R N RLS  RA
Sbjct: 99  LFDFDRAEVKPEGKTVLDEKIVTGMKLHTDTGPLLIIGHADRI---GSERYNQRLSERRA 155

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +    L++ GV   R+  + G      
Sbjct: 156 NAVRDYLVEQGVGAQRL-SVQGKGESEP 182


>gi|167581046|ref|ZP_02373920.1| OmpA family protein [Burkholderia thailandensis TXDOH]
          Length = 200

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 77  LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 133

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 134 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 190


>gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87]
          Length = 226

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 118 KSDVLFNFNKSTLKPEGQQALDQLYNQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 174

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
             RA S    L+  G+  D+IS   G         +
Sbjct: 175 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGN 209


>gi|294140555|ref|YP_003556533.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
 gi|293327024|dbj|BAJ01755.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
          Length = 289

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   S     +   + K+ E LA     E++ I  +TD+         N ++S  RA S
Sbjct: 184 YESGGSELTRFSKSQIAKVQEYLAYDSEVELVLIDAYTDSY---GGRSINQKVSEQRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
                + +G+++DRI  + G    R   ++        NRR+ I +   
Sbjct: 241 VKNFFLSAGINQDRIYTV-GHGERRHVASNATIDERGRNRRVVIRISKP 288


>gi|258545495|ref|ZP_05705729.1| outer membrane protein A (outer membrane protein II)
           [Cardiobacterium hominis ATCC 15826]
 gi|258519195|gb|EEV88054.1| outer membrane protein A (outer membrane protein II)
           [Cardiobacterium hominis ATCC 15826]
          Length = 324

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 22/148 (14%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE---VI 266
             +      +  L+   +   + +F    S      PE    LQ+I    A   +   VI
Sbjct: 179 PRLEQNRNCSPELVQQYNIDVSALFKFDRSDYASILPEGKRQLQEIAAAAAQYRDATSVI 238

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--- 323
            I G+TD          N RLS  RA +  +V++++G     +    G   +   +    
Sbjct: 239 YIDGYTDPE---GKPAYNQRLSQRRAQTVKRVMIENGFPAASLKA-RGHGENDPVVTGCR 294

Query: 324 -----SDPMNSA----NRRIDILVEDRQ 342
                +    +A    NRR++I +  + 
Sbjct: 295 KRNPRNASARAACDQPNRRVEIKLYGKN 322


>gi|160898923|ref|YP_001564505.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|160364507|gb|ABX36120.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 168

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +F   S+    +    + ++G  L     E + + GHTD          N RLSL R
Sbjct: 65  GKLLFGFDSAEVGAQARTKVLELGRALKGVGIERLRVEGHTDDR---GSDAYNMRLSLRR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           A +   VL ++G++   I ++ G       + SD   + NRR+ I+V
Sbjct: 122 AEAVADVLAEAGLARQDI-EVKGLGRAMPVVPSD--AAENRRVAIVV 165


>gi|299067718|emb|CBJ38927.1| Peptidoglycan-associated lipoprotein, protein pal, component of
           tol-pal system [Ralstonia solanacearum CMR15]
          Length = 171

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 66  KRSVYFDFDSYAVKPEYQGLLTQHAHYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 122

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + + +   +   + NRR DI+
Sbjct: 123 RAEAVRRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 170


>gi|217970135|ref|YP_002355369.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|217507462|gb|ACK54473.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 232

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++   E    L ++          + +  GHTD          N RLS  RA
Sbjct: 116 DALFDFDKAVLKAEGKAKLDQLAAQAKSLKLEVILAVGHTDRL---GSNTYNQRLSERRA 172

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDR 341
            +    L+  GV  +R+    G    +    +        +A       +RR+++ V   
Sbjct: 173 AAVKTYLVSKGVDANRVYT-EGKGETQPVTGNKCDKVGGRAAQISCLQPDRRVEVEVIGS 231

Query: 342 Q 342
           +
Sbjct: 232 K 232


>gi|78061495|ref|YP_371403.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77969380|gb|ABB10759.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 169

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +    + + G++D      + + +  LS  R
Sbjct: 62  GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDQE---GVDKYDLELSRRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G         +      + NRR  I+V  R
Sbjct: 119 AEVVALELVDVGLDTKRI-AIVGKGKSDPVGDNKTPGGRAQNRRAAIVVSPR 169


>gi|186896079|ref|YP_001873191.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|186699105|gb|ACC89734.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 560

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           P+FD +S+      +T  ++ ++  ++  +      I GH+D +     +  N  LS  R
Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +    L+K   ++ D      G         +        NRR+++L+   Q
Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549


>gi|171058626|ref|YP_001790975.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
 gi|170776071|gb|ACB34210.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
          Length = 196

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                FD  S +       V++   + L       + I GHTD          N  L   
Sbjct: 90  PRVVYFDFDSYVVKDTYRPVIEANAKYLGVDRKRQMLIEGHTDER---GGREYNLALGQR 146

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GV + +   +S +   R   +   +   + NRR ++
Sbjct: 147 RAEAVVRALALLGVPDSQTEAVS-YGEERPAASGADEAAWAKNRRAEL 193


>gi|163746609|ref|ZP_02153967.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
           HEL-45]
 gi|161380494|gb|EDQ04905.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
           HEL-45]
          Length = 639

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 13/235 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           I +   +++  + +       +  N      + +S         + +         D   
Sbjct: 400 IRRPGDEVQTQTFDDGSTRTIVTKNDGSRIETIRSRDGTVLRRTNFDAQGREYILVDDLV 459

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224
              +     LP + + +       +    L + + + L          + V        +
Sbjct: 460 EEREVIVNDLPQVQETQQAQRASVQDEAALRQALQAELRSDQGRTFSLRQVREIREVRSL 519

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRN 279
              +  + +   F   S+   PE    L  IG  L          VI + GHTDA     
Sbjct: 520 APEL--ELDAVRFPTGSAAIQPEQARALANIGSTLRDMIANDPRTVILVEGHTDAV---G 574

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            A  N  LS  RA +    L +   V    +    G+   +L++ +     ANRR
Sbjct: 575 DAGYNLALSDRRAETVALALTEYFDVPPANLIT-QGYGESQLRVPTTTAEPANRR 628


>gi|51596997|ref|YP_071188.1| OMPA family outer membrane porin [Yersinia pseudotuberculosis IP
           32953]
 gi|51590279|emb|CAH21916.1| putative OMPA family outer membrane porin [Yersinia
           pseudotuberculosis IP 32953]
          Length = 560

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           P+FD +S+      +T  ++ ++  ++  +      I GH+D +     +  N  LS  R
Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +    L+K   ++ D      G         +        NRR+++L+   Q
Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549


>gi|153947393|ref|YP_001400334.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|170023708|ref|YP_001720213.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
           YPIII]
 gi|152958888|gb|ABS46349.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
 gi|169750242|gb|ACA67760.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
          Length = 560

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           P+FD +S+      +T  ++ ++  ++  +      I GH+D +     +  N  LS  R
Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           A +    L+K   ++ D      G         +        NRR+++L+   Q
Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549


>gi|260574834|ref|ZP_05842836.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259022839|gb|EEW26133.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 190

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   S+         L +  +         +I GHTD+         N RLS  RA S 
Sbjct: 91  LFATDSATLTAHGRSFLTQFFQ--QAGAFGYAIYGHTDSR---ASDEYNMRLSQRRAASV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
             +    G   +R     GF   +   ++   +    NRR++++
Sbjct: 146 ANIARSVGAVVER---EIGFGERQPIASNGSASGMQQNRRVEVV 186


>gi|170727083|ref|YP_001761109.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169812430|gb|ACA87014.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 289

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++             + K+ E L++  EV  + I  +TD+         N ++S +RA S
Sbjct: 184 YEFGGKELTRYAKAQIAKVQEYLSYDPEVELVLIDAYTDSY---GGRSINQKISEERADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             +  + +G++++RI  + G        ++      + NRR+ I +   
Sbjct: 241 VKEFFISAGITQERIHTV-GHGERHHVASNATIDERARNRRVVIRITKP 288


>gi|83950613|ref|ZP_00959346.1| OmpA domain protein [Roseovarius nubinhibens ISM]
 gi|83838512|gb|EAP77808.1| OmpA domain protein [Roseovarius nubinhibens ISM]
          Length = 641

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 21/304 (6%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           +  +   ++ +   +         ++      +     PP  +    +       ++   
Sbjct: 312 LIALQGIEEKSFDDVVGGLETALPDVFALHAVL-----PPPPTDAEVVIPEFVATLSPEG 366

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
           +    G     K  + +++      +S         +            +     S  + 
Sbjct: 367 LVQLRGRLGSDKLRETVDSFARARFSSAGVHTKARVVEGLPADWPVRVLAGLESLSYLEN 426

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISS--------TLSGLVADNIVKGVLFETTRT 222
               + P S +       K     ++  ++          +     + +       T   
Sbjct: 427 GAVTVTPDSIDVTGNTGNKDASAQISGFLAETLGERGQFEIDVTYQEVLDPIAALPTPEE 486

Query: 223 GI-LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
            +  I +I       F+  S         +L  I E+L    E+   I G+TD+      
Sbjct: 487 CVSKIQLIVAERKINFEPGSDKLDSNGAAILDDIAEILKKCGEIKLEIAGYTDSQ---GR 543

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              N +LS +RA +    L    V       + G+  +     +D       NRRI+  +
Sbjct: 544 ESMNQQLSENRARAVLDGLRMRRVITSTYEAV-GYGENDPIADNDSDEGREANRRIEFHL 602

Query: 339 EDRQ 342
              +
Sbjct: 603 IKPE 606


>gi|330864159|emb|CBX74225.1| hypothetical protein YEW_BY08350 [Yersinia enterocolitica W22703]
          Length = 206

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267
           ++  +  +      + +    +  PMFD +S    P           +L    H    + 
Sbjct: 67  LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 126

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GH+D +     A  N  +S  RA      L+K+         I G        ++D  
Sbjct: 127 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 183

Query: 328 NS--ANRRIDILVE 339
                NRR+++L+ 
Sbjct: 184 AGQDQNRRVEVLLL 197


>gi|310815074|ref|YP_003963038.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
 gi|308753809|gb|ADO41738.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
          Length = 708

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 16/307 (5%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           + +   +A +      I            + +  +       E  +       +  +   
Sbjct: 312 VRLIAGSAMNQSVFDGIVGRVENSLPATFSFTAELPPPPTEAEAGAPPPPQFYVTLNTEG 371

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            ++     + +            ++ +++                   +    +    +N
Sbjct: 372 QAILTGRLADDLLNTSAGNFARAYFGASNVIMATRVLPDGLPQGWSTRVLTGIESLSHLN 431

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI---- 224
                  P     +    +           I+           V  +       G+    
Sbjct: 432 NGSVLITPDTITVRGETGEVNASNTISQFLINKLGQNANFTVDVDYLEALDPIAGLPTPG 491

Query: 225 ----LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR 278
                +  ++  N   FD  S+     ++ V+  + +VL        I + G+TD+    
Sbjct: 492 ECVAQLGALNDENKIAFDPGSAQIAGSSLRVIDAMADVLRGCPVDLPIRVAGYTDSQ--- 548

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             A  N RLS DRA +    L    V     + + GF       ++D       NRRI  
Sbjct: 549 GRAEMNLRLSQDRADAVLAALRMRRVPVSSFTAV-GFGAADPIASNDSEEGREANRRIAF 607

Query: 337 LVEDRQG 343
            + + +G
Sbjct: 608 SLIEEEG 614


>gi|167911995|ref|ZP_02499086.1| OmpA family protein [Burkholderia pseudomallei 112]
 gi|254203932|ref|ZP_04910292.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254295613|ref|ZP_04963071.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|147745444|gb|EDK52524.1| OmpA family protein [Burkholderia mallei FMH]
 gi|157805511|gb|EDO82681.1| ompA family protein [Burkholderia pseudomallei 406e]
          Length = 200

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 77  LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 133

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 134 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 190


>gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein
           [Magnetospirillum magneticum AMB-1]
 gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein
           [Magnetospirillum magneticum AMB-1]
          Length = 378

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD   +   PE   VLQ+       +      +  HTD       A+ N  LS 
Sbjct: 271 KNYIVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTD---LSGSAKYNQALSE 327

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            R  +    L + G+   +I  +         + +        NRR++I++
Sbjct: 328 KRGAAVKAQLEQLGIPASQIV-VVAKGKTSPMVPTPDGVREPQNRRVEIIL 377


>gi|330502404|ref|YP_004379273.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328916690|gb|AEB57521.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 217

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K+++         Q     +      L          FE     ++++        
Sbjct: 19  AGSEKKEVAKPAAMPAPQVTRAWLDEYEPKLREAVKGSQFEFERRENLLVVT---APVQG 75

Query: 236 MFDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAY 293
            F+     + LP ++  + ++ ++L    ++  +  GH D+      A  N  LS  RA 
Sbjct: 76  SFNPDRPHMLLPASLGPITRVAKLLETDEDIAVVVLGHADS---SGDAALNRDLSQQRAR 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +   +   SG+ + R+ ++ G      + A+D       NRR++IL+  R
Sbjct: 133 AVTSIFRLSGLKQSRL-QVMGLGSDMPRAANDSAAGRALNRRVEILLTSR 181


>gi|289661910|ref|ZP_06483491.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667001|ref|ZP_06488076.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 172

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+TD          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNTDER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R     + +   S NRR++I+
Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESGESCWSQNRRVEIV 168


>gi|323138982|ref|ZP_08074042.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
 gi|322395736|gb|EFX98277.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
          Length = 179

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 34/104 (32%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  S+         L K  E L        ++ GH D          N+ L   R
Sbjct: 70  DRIFFETDSTDLTSTAQATLDKQAEWLNRYGRYSFTVEGHADER---GTREYNFALGARR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A      L+  GVS  RI  +S +   R           S NRR
Sbjct: 127 AEVTKNYLISKGVSGSRIRTVS-YGKERPVAVCDDISCWSQNRR 169


>gi|319953905|ref|YP_004165172.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319422565|gb|ADV49674.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 645

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q +T  FD +     P+  V +QK+   +       I +  HTD+         N  LS 
Sbjct: 532 QLSTIYFDLNKYNIRPDAEVEIQKVIAAMEKYPSLKIKVNSHTDSR---GKDAYNLWLSQ 588

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDP-----MNSANRRIDILVED 340
            RA S    ++  G+S DR+ +  GF   +L     ++       +  NRR + ++ +
Sbjct: 589 KRAESTVGYMVSKGISADRL-EGEGFGETKLVNGCGNNSKCSSKEHDLNRRSEFIIRE 645


>gi|114771185|ref|ZP_01448605.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
 gi|114548110|gb|EAU50997.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
          Length = 163

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +T +F    S    E   +L K  E L ++    I+I GH D +        N  L   R
Sbjct: 53  DTVLFLVDQSSLTAEATDLLNKQAEWLLNNPNKSITIEGHADET---GTREYNLALGARR 109

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A S    L+  G+++ RI+ ++ F   R     + +   S NRR
Sbjct: 110 AASVQNYLVSRGLTDSRINTVT-FGKERPLAICSDEACWSKNRR 152


>gi|107025698|ref|YP_623209.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116693120|ref|YP_838653.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|105895072|gb|ABF78236.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116651120|gb|ABK11760.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 170

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +    + + G++D       A  +  LS  R
Sbjct: 63  GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDAELSRRR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G         +      + NRR  I+V  R
Sbjct: 120 AEVVAVELVDVGLDAKRI-AIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170


>gi|92118969|ref|YP_578698.1| OmpA/MotB [Nitrobacter hamburgensis X14]
 gi|91801863|gb|ABE64238.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 164

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K    L        +I GH D          N  L   R
Sbjct: 56  DRVFFESDQTNLSPQAITTLEKQARWLQTYNRYSFTIEGHADER---GTREYNIALGARR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L   G++  R+  IS +   R     +D    S NRR
Sbjct: 113 AQTVRSFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 155


>gi|323499085|ref|ZP_08104065.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
 gi|323315920|gb|EGA68951.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
          Length = 278

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 77/259 (29%), Gaps = 16/259 (6%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS---EHCKNSLTRDS 151
              +   I            +G    +  +  +  +             +  K  L    
Sbjct: 11  IASVASIIGCSSYPEQGSGGLGENYIQSNFTPVMPDEPLGPEHGLRFDWQLAKLHLDALI 70

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            +G   C    + ++I K+            + A       +    ++   L   V    
Sbjct: 71  REGARWCFPAAVVQAIEKQNRIARELEGGLLLDAANDIVIQRKRLNELELQL-DYVTSQA 129

Query: 212 VKGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
                 +       +++IDQ    +     F  +S+   P+ +  L K   +L       
Sbjct: 130 RCVPPVDEGAFHQRLAVIDQLFNLLNIDNQFAFNSAEINPKYMGHLAKAANILTEHPSLA 189

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           +S+ GH D+         N  L++DRA    + L   G+S  RI   S           +
Sbjct: 190 LSVTGHADSV---GDIEYNQNLAMDRAQQVKRYLSIFGLSPTRIETHS-VGDTLPLYEGE 245

Query: 326 PMNSA--NRRIDILVEDRQ 342
                  NRR+ I V D Q
Sbjct: 246 SEGVRLTNRRVSIEVVDTQ 264


>gi|313828793|gb|EFS66507.1| OmpA family protein [Propionibacterium acnes HL063PA2]
          Length = 115

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 4   DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 60

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 61  SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 114


>gi|37704608|gb|AAR01576.1| OprF [Pseudomonas sp. MFY52]
 gi|37704630|gb|AAR01587.1| OprF [Pseudomonas sp. MFY76]
          Length = 316

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+    +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316


>gi|99080027|ref|YP_612181.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99036307|gb|ABF62919.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 192

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F  + S         LQ+  + +   T    + GHTD+         N  LS  RA + 
Sbjct: 91  FFPTNGSTVNAAGRKRLQEWFQSVMPGTRSFVVAGHTDSR---ASDEYNMALSQRRADAV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            Q+    G    RI  +  +     ++ +      + NRR++I    R
Sbjct: 148 AQIGRSVG---ARIKDVRAYGERSPRVPNRGAANLAQNRRVEIYCIRR 192


>gi|329944220|ref|ZP_08292479.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530950|gb|EGF57806.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 462

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290
               F   S     +   VL  + E +        ++I GHTD          N  LS  
Sbjct: 176 GDVTFAVDSDQLSAQADSVLAGVVEQIKKYPSGGELTITGHTDDV---ADDAHNQDLSER 232

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           RA +    L            +SG      ++ +D      ANRR+++ ++  +
Sbjct: 233 RAKAVSGRLKTLTDLSAWKEAVSGKGESSPRVPNDSEENKQANRRVEVTLKPSK 286


>gi|148977050|ref|ZP_01813696.1| protein F-related protein [Vibrionales bacterium SWAT-3]
 gi|145963710|gb|EDK28971.1| protein F-related protein [Vibrionales bacterium SWAT-3]
          Length = 210

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
                F   S+ P P     L  +G  L+   ++  +  GHTD +      R N  LS  
Sbjct: 101 EQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDIVIEGHTDNT---GTDRINDPLSEQ 157

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA      L  + VS   I    GF  +     +        NRR+++++
Sbjct: 158 RAKEVKARLESNYVSSRSIYT-RGFGEYVPACTNASPQGKACNRRVELML 206


>gi|239820234|ref|YP_002947419.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239805087|gb|ACS22153.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 276

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 16/116 (13%)

Query: 234 TPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +F           PE    L  +   +    + I + G+TD          N  LSL 
Sbjct: 162 DGLFRFDGRSLADLLPEGRRKLDALAGDIKA-ADAIKVTGYTDRL---GSQAYNSALSLA 217

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRIDILV 338
           RA +    L+++GV   +I ++ G      K+  +    +A       NRR++I V
Sbjct: 218 RANTVRDYLVQAGVPAQKI-QVQGKGESEPKVQCTQTARAALIDCLAPNRRVEIEV 272


>gi|126728387|ref|ZP_01744203.1| OmpA/MotB family protein [Sagittula stellata E-37]
 gi|126711352|gb|EBA10402.1| OmpA/MotB family protein [Sagittula stellata E-37]
          Length = 168

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE   VL    + L  +++ +++  GH D          N  L   R
Sbjct: 57  DRVLFAVDQSSLSPEARTVLDGQAQWLMTNSDYMAVIEGHADEQ---GTREYNLALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +  + L+  GVS+ R+  +S +   R           + NRR
Sbjct: 114 ANAVMEYLVSRGVSQSRLKFVS-YGKERPIEICSEEACYAKNRR 156


>gi|117925108|ref|YP_865725.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117608864|gb|ABK44319.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
          Length = 322

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 47  FFLVMWII--------NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98
            FL M  +         +  ++  K   Q+    G N ++ +   +    P  + +    
Sbjct: 24  LFLSMAAVISCMAVVSASQAEEAYKGWIQWHPQTGPNTISTAGTQYYPYQPSPKPACEHG 83

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
             +    +     D      ++               +  +     N         +   
Sbjct: 84  MDAAGNCVGDADGDGVTDGKDKCPGTPAQYAVDAVGCSLDRDGDGVNDAMDRCPDSRKGV 143

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----- 213
           K       ++ +++  +    K    ++  K             + G++ +         
Sbjct: 144 KVDARGCELDDDQDGVVNSDDKCPGTSVHVKVDATGCEISKDGDMDGVLNEQDACLDTPK 203

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272
           G+         + SI        F+  S     + + VL      +     +   ++GHT
Sbjct: 204 GLPVGKNGCWSVNSIH-------FNTGSWELDAKALSVLNAAVATMKQHAAIRVEVQGHT 256

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA 330
           D+         N +LSL RA S    + K G++ DR    + F   +L  +  +      
Sbjct: 257 DSR---ADDTFNKKLSLKRAESVIWYMTKQGLARDRFVAAA-FGEQKLLNSEKNSDERLV 312

Query: 331 NRRIDI 336
           NRR+++
Sbjct: 313 NRRVEL 318


>gi|86160063|ref|YP_466848.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776574|gb|ABC83411.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 412

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 69/272 (25%), Gaps = 16/272 (5%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P   +    + G    Q  P+       D            +       +      + + 
Sbjct: 151 PDLDDRCPEAPGPATLQGCPDADGDGVGDAEDACPAEAGPAETLGCPPAKDSDGDGIPDE 210

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           I       +            +   D     D   +   E+                   
Sbjct: 211 IDRCPLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHEQGPLENRGCPVMDADGDGVA 270

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
              D            VA +               I++ +         +    LP + V
Sbjct: 271 DPDDRCP-----EQAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAV 321

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L ++ + L       +++  HTD       A  + RLS  RA +    L   G+  +R+
Sbjct: 322 LLDELAQALRDRPRLRVAVEVHTD---GAGDAAASKRLSQARAEAVRAALAGRGIEGERV 378

Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339
               G        ++      + NRR ++ + 
Sbjct: 379 EA-RGIGAEHPIASNKTARGRAQNRRTEVRIL 409


>gi|32491160|ref|NP_871414.1| hypothetical protein WGLp411 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166367|dbj|BAC24557.1| pal [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 170

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           Q N   FD    +   E   +L    + L ++     +  GH D       +  N  L  
Sbjct: 64  QNNIVYFDLDKYVVKDEFTQILDAHSDFLKNNPSYKIVIEGHADER---GTSEYNIALGE 120

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
            RA S    L   GV +D++  +  +   +       +   + NRR+ + 
Sbjct: 121 RRAKSVKIYLQSKGVLDDQMK-VISYGKEKPAILGHDETTYAKNRRVVLT 169


>gi|255536190|ref|YP_003096561.1| OmpA [Flavobacteriaceae bacterium 3519-10]
 gi|255342386|gb|ACU08499.1| OmpA [Flavobacteriaceae bacterium 3519-10]
          Length = 474

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 73/270 (27%), Gaps = 23/270 (8%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N    N   AS  +       +R     +D       T    + +             ++
Sbjct: 209 NSTIANFWQASASLLFRFGNTDRDKDGILDKDDLCPDTPGLAEFQGCPDTDGDGVPDKDD 268

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               ++   ++  C    T             ++          +        +      
Sbjct: 269 QCPDVAGPVENNGCPWPDTDGDGVVDKDDACPEVAGPAENNGCPWPDTDGDGILDKDDAC 328

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             +  LA+            +     L                +  +F+   +   PE+ 
Sbjct: 329 PTVPGLAQYNGCPKPQEAWADDATKAL----------------DNILFNFDKATIRPESK 372

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
             L    +++  S     I GHTD    +     N +LS  RA +    L   GV++  +
Sbjct: 373 EKLDAAAQIIKDSQGKFLIIGHTDK---KGAESYNLKLSQRRAGAVVDALEARGVADSSL 429

Query: 310 SKISGFAH---HRLKIASDPMNSANRRIDI 336
             + G         + AS+     +R++ +
Sbjct: 430 KSM-GVGEQDATVPETASNAERLKDRKVVV 458


>gi|71907621|ref|YP_285208.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847242|gb|AAZ46738.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 195

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 8/172 (4%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                  S   +     +  L      +   L   V        + E     +       
Sbjct: 28  PSADGGQSAVVVRDPAGEVLLNQPYAAVKRRLDSNVGYQSSPEEVRERYANVLAAQPARP 87

Query: 232 RNTPM-FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
           R+  + F+   +I   E+   L  I + +A      + + GHTD          N +LSL
Sbjct: 88  RSYVLYFEAGGNILTQESKAALVNIRKEIAERAASEVMVIGHTDRV---GSVEGNDKLSL 144

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            RA     +L++SG+S +++  + G       + +        NRR++I V 
Sbjct: 145 QRAEGLRDLLIESGISAEKMEAV-GRGERDPLVPTADEVDEPKNRRVEINVR 195


>gi|330814653|ref|YP_004362828.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
 gi|327374645|gb|AEA65996.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
          Length = 421

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +E   A +  +    + +  ++    L  +     V          +++   R   M+  
Sbjct: 260 RELRHADQSAQASSPIDRLGAALGEQLRDEIAAGNVELIKDTAADTVTL---RFNGMYAS 316

Query: 240 SSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296
                 P    V+  +G  +A S     + I G+TD  P     +  N  LS  RA    
Sbjct: 317 GDVTVAPWWASVMASVGRAIASSPATTHVLITGYTDNLPASPAHQGSNHALSTARAQQVA 376

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           Q+   +GV ++RI  + G +       +      + NRR+++ V +
Sbjct: 377 QIFAVAGVPKERI-SVVGQSDADPLADNVSKEGRARNRRVEVTVSN 421


>gi|225075662|ref|ZP_03718861.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
           NRL30031/H210]
 gi|224953084|gb|EEG34293.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
           NRL30031/H210]
          Length = 219

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 8/134 (5%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +      L        +  E     I + + +      F   S+         L    +
Sbjct: 92  YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGHAQSALSAAAQ 148

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +   +I GHTD +        N  LS +RA S    L   GVS  R+S   G+ 
Sbjct: 149 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTF-GYG 204

Query: 317 HHRLKIASDPMNSA 330
             +   ++  +   
Sbjct: 205 SRQPIASNATVEGR 218


>gi|152985175|ref|YP_001347005.1| outer membrane protein [Pseudomonas aeruginosa PA7]
 gi|150960333|gb|ABR82358.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
          Length = 321

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F    +         L  I ++L     +  I   GH+D          N  LS  RA +
Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L  +GV E +I+ +  +      +A++     + NRR+ + +  
Sbjct: 235 VQEYLKGNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLAR 281


>gi|330830247|ref|YP_004393199.1| sodium-type flagellar protein MotY [Aeromonas veronii B565]
 gi|328805383|gb|AEB50582.1| Sodium-type flagellar protein MotY [Aeromonas veronii B565]
          Length = 277

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           +DK+S      +   L  I E +     +  +    ++D+         N +LS  RA +
Sbjct: 170 YDKNSDQLSIPSKRRLAMISEFIKADKGIDVVVIDAYSDSY---GGRWPNLKLSEKRADA 226

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
             +V +  G+   +I  + G    +   +++     + NRR+ I    R G
Sbjct: 227 IKKVFVDLGIDPGKI-SVEGHGEKQHVASNETEQGRAKNRRVVIS-MGRNG 275


>gi|221134115|ref|ZP_03560420.1| putative outer membrane adhesin like proteiin [Glaciecola sp.
            HTCC2999]
          Length = 2282

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 236  MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            +F  +SS       + + K+   +    +   +  GHTDA       + N  LS  RA  
Sbjct: 2170 LFAINSSQLTSNDKLEVMKLATFMQTYPDTSVVIEGHTDAR---GTDKYNQWLSQQRAAV 2226

Query: 295  AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI--DILV 338
              ++L+    ++ +RI  I GF   +L I +      + NRR   +I +
Sbjct: 2227 VGKLLINQHNIAPERIETI-GFGETQLLIDATTEAQHALNRRTIAEITI 2274


>gi|315125307|ref|YP_004067310.1| outer membrane protein; signal peptide [Pseudoalteromonas sp.
           SM9913]
 gi|315013820|gb|ADT67158.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
           sp. SM9913]
          Length = 354

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + S    + +  + ++   L    +   +  GHT A      A  N  LS  RA + 
Sbjct: 244 FPNNDSSVSQQYLNDIDEVATFLKEYPDTTVLLEGHTSAV---GKASYNKWLSKKRADAV 300

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + L+  G++EDRI+   G    RLK  ++    ++ NRR++  V+ 
Sbjct: 301 AKKLIADGIAEDRITTA-GLGEERLKNEANTAKAHAENRRVEAHVKS 346


>gi|258543922|ref|ZP_05704156.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
 gi|258520861|gb|EEV89720.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
          Length = 256

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDR 291
             +F   ++   PE    L  +   +    +   +R  G TD       A  N  LS  R
Sbjct: 140 DALFAFDTATLRPEADRALADLLAKVRAHGDTGEVRVDGFTDRL---GSATYNRELSQAR 196

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDILVED 340
           A +    L++ G++  RI + +G    +     A              +RR+++ V  
Sbjct: 197 ADAVKNYLVRGGIAASRI-RAAGLGSSQPLAHCADSLPRGELIACLQPDRRVEVTVSS 253


>gi|21232447|ref|NP_638364.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767470|ref|YP_242232.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188990576|ref|YP_001902586.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114228|gb|AAM42288.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572802|gb|AAY48212.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732336|emb|CAP50528.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris]
          Length = 172

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R           S NRR++I+
Sbjct: 120 RRGNAVSSALQAAGGSASQLTVVS-YGEERPVCTETSESCWSQNRRVEIV 168


>gi|315186730|gb|EFU20488.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
          Length = 826

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 23/255 (9%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                 V +K             +  + ++   +     ++     + K +    S D E
Sbjct: 578 DTVPPEVSVKTEPVPFSPDGDGRDEVVAFIPEVRDESGIESWELVIANKDRKQTFSEDGE 637

Query: 165 KSINKEENYFLPPLSKEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
                  + F       +          + DL   ++   + +V D     V       G
Sbjct: 638 PPARIVWDGFFESGDLAEQAHDYPVAFTVTDLGGNVAKASALVVTD-----VYVVIKDGG 692

Query: 224 ILISIIDQRNTPMFDKSSS-----IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             IS+ D    P F    +         E +  L ++  +L    +    + GH  +  +
Sbjct: 693 AYISVPDIHFAP-FTADYTDKVPSEIREENLRTLDEVAAMLKKFPQYTVQLEGHAVSLLW 751

Query: 278 RNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
            +  R           LS  RA +  + L+  GV   R+  I G+   R  +    +   
Sbjct: 752 FDPERAKVEHQEVLVPLSRARAEAVRKALISRGVDPSRL-SIVGYGGSRPIVPFSDLKKR 810

Query: 331 --NRRIDILVEDRQG 343
             NRR++ L++++ G
Sbjct: 811 WVNRRVEFLLKEKSG 825


>gi|313802740|gb|EFS43958.1| OmpA family protein [Propionibacterium acnes HL110PA2]
          Length = 368

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 314 SRRRAASGAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367


>gi|156976618|ref|YP_001447524.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
 gi|156528212|gb|ABU73297.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
          Length = 207

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +    + KK    +S  +  N  +      +   ++I + +Q +   F   S+  L ++
Sbjct: 58  AQVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVH---FQTGSARLLAQS 114

Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              +Q +G  LA  T+V  +  GH D++     A  N  LS  RA    + L+ + +   
Sbjct: 115 QDWIQSLGHYLAGRTDVDVVIDGHADST---GAASFNDSLSEKRAREVEKQLLATSLPRQ 171

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           R+    GF  +  + ++   +    NRR+++++   Q
Sbjct: 172 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLIVDQ 207


>gi|295688124|ref|YP_003591817.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
           21756]
 gi|295430027|gb|ADG09199.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
           21756]
          Length = 184

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 7/112 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +   +++  +   FD        +   VL    + L       + I G+ D         
Sbjct: 66  VQDFVVNVGDRVYFDTDEYSVRADGQPVLAGQAQWLNRYPSVKVRIEGNADER---GTRE 122

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
            N  L   RA +    L+  GVS  RI  IS F   +   A       + NR
Sbjct: 123 YNLALGARRANAVRDFLIAQGVSASRIETIS-FGKEKPIDAGSTEEAWAKNR 173


>gi|255535532|ref|YP_003095903.1| membrane-bound proton-translocating pyrophosphatase
           [Flavobacteriaceae bacterium 3519-10]
 gi|255341728|gb|ACU07841.1| Pyrophosphate-energized proton pump [Flavobacteriaceae bacterium
           3519-10]
          Length = 912

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P     L  + E++       I + G+TD +     A  N +LS  RA + 
Sbjct: 808 FQSGSSDLKPGAENALANLAEIMNDHPNVRIKLGGYTDDT---GNADTNLKLSNLRAQTT 864

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILVED 340
              L++ G++ DRI    G+        A+D     + NRRID+ V  
Sbjct: 865 KLKLLEMGIAADRIET-EGYGPLFPVCEANDTDECKAQNRRIDVRVLS 911


>gi|86146732|ref|ZP_01065053.1| putative protein F-related protein [Vibrio sp. MED222]
 gi|85835579|gb|EAQ53716.1| putative protein F-related protein [Vibrio sp. MED222]
          Length = 197

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+ P P     L  +G  L+   ++  +  GHTD +      R N  LS  RA   
Sbjct: 93  FKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNT---GSDRVNDPLSEQRAKEV 149

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              L  + VS  R     GF  +     +        NRR+++++
Sbjct: 150 KARLESNYVS-SRAIYTRGFGEYVPACNNASAQGKACNRRVELML 193


>gi|94309657|ref|YP_582867.1| OmpA/MotB [Cupriavidus metallidurans CH34]
 gi|93353509|gb|ABF07598.1| outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Cupriavidus metallidurans CH34]
          Length = 217

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L   T  + I  GHTD+       + N RLS+ RA S
Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPM----NSANRRIDILVEDRQ 342
               L+  GV  +R+    G    +LK+       +          NRR+++ V   +
Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGTR 214


>gi|239628950|ref|ZP_04671981.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519096|gb|EEQ58962.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47FAA]
          Length = 277

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 20/217 (9%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           NI  L     +   +  +   ++               N EE+  +P  S         +
Sbjct: 38  NISKLEEIASAMQRQLGIEAQTDIEDVPQDLKYPVIGENNEESTQVPTGS------QNTQ 91

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              +++A       +   ++N+   V        I       +N  +FD  S+    ++ 
Sbjct: 92  ASAREMALMARDIQTYFDSENLDAIVSNSENAVFIRF-----KNDLLFDPDSASLRADSK 146

Query: 250 VVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
            +L  +G +L    + I    I GHT  +   N   ++  LS +RA +    L    G  
Sbjct: 147 SMLDAVGIMLKEKQDNILAVYINGHT--AQAANSLINDRLLSSERADNVAIYLEDQVGFD 204

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             ++    G+  +     +        NRR+D+++  
Sbjct: 205 PKKLI-CRGYGKYYPIADNATREGREQNRRVDMIILG 240



 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 11/213 (5%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                      W   YAD +T+++ FF++++ I+  +    + I               +
Sbjct: 2   KRQKDEEGGQEWLNTYADMITLVLTFFVLLYSISNVNISKLEEIASAMQ---------RQ 52

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
              + Q   E   Q+     I E+  +++         Q    +         +      
Sbjct: 53  LGIEAQTDIEDVPQDLKYPVIGENNEESTQVPTGSQNTQASAREMALMARDIQTYFDSEN 112

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               ++  +SE    +    DL    +            + +  M ++K+   LA  I+ 
Sbjct: 113 LD--AIVSNSENAVFIRFKNDLLFDPDSASLRADSKSMLDAVGIMLKEKQDNILAVYING 170

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
             +      I   +L       + I + DQ   
Sbjct: 171 HTAQAANSLINDRLLSSERADNVAIYLEDQVGF 203


>gi|254463477|ref|ZP_05076893.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
 gi|206680066|gb|EDZ44553.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 211

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F  +S          L         S     I GHTD+         N RLS +RA + 
Sbjct: 113 FFSTNSHHISRSGQQHLMNFFRSSKASA--YIIAGHTDSR---ASDEYNMRLSYNRATTV 167

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             +   +G    R++ + G+       ++      S NRR++I+
Sbjct: 168 ANIARSAG---ARVADVRGYGERMPVASNKSQVGMSKNRRVEII 208


>gi|82523887|emb|CAI78610.1| peptidoglycan-associated lipoprotein [uncultured delta
           proteobacterium]
          Length = 184

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 16/169 (9%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
                  +             ++RL+ L  + ++          +           I I 
Sbjct: 23  GACTKKEVAVEDPTMTSQNGEQERLKQLEAERAAQAKAETEAMRLAKSEMLEKFKNIDIY 82

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
                    F+   S    E  ++L++    L+ ++ +  +I GH D       +  N  
Sbjct: 83  ---------FEFDKSSLTEEAKLILKEKALFLSANSAKNTTIEGHCDER---GTSEYNLA 130

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
           L   RA +    L   G+S  RI   S +          ++   + NRR
Sbjct: 131 LGDRRAKNVKTYLQGLGISGQRIITTS-YGEEMPVDTGHNETAWAKNRR 178


>gi|332669626|ref|YP_004452634.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
 gi|332338664|gb|AEE45247.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
          Length = 517

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 71/264 (26%), Gaps = 22/264 (8%)

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           +N           +  +E + +     ++                     +   +    +
Sbjct: 91  ENLSSPGPSGVRLVDTEEGVVRPVARDELDRAVMSGNSTPGGPATDAGDEAADGDEVVYA 150

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
                + G+                +  + P     +L +  ++  +             
Sbjct: 151 AFAAPDAGRVDVMLPQGGW----VADVPVVPADDAGVLTVPPEELAEGGVADAPVVPLEA 206

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
             + +   V    T   + + +       +F   S +  PE    L      +       
Sbjct: 207 YTEVVGGTVRARQTPEAVTVQVASD---VLFAVDSDLLGPEAEAALAAAAAQVTAYPGGT 263

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK----SGVSEDRISKISGFAHHRLK 321
           +++ GHTD          N  LS  RA +    L +    SG        +      +  
Sbjct: 264 LTVVGHTDDV---ADDAYNLDLSQRRAATVAARLAQVADLSGFD----VTVDAKGESQPA 316

Query: 322 IASDP--MNSANRRIDILVEDRQG 343
           +A       + NRR++I++   QG
Sbjct: 317 VAGTSPDARALNRRVEIVLV-PQG 339


>gi|327485675|gb|AEA80081.1| Protein F-like protein [Vibrio cholerae LMA3894-4]
          Length = 182

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246
           ++   +     +       +++ + +L    +  ++     +I   NT  F+  S+    
Sbjct: 27  QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 86

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            +   L  +   LA  + +  +  GHTD +      + N +L+  RA +    L++S V 
Sbjct: 87  ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVV 143

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           ++ I    GF  +     +      + NRR++I
Sbjct: 144 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 175


>gi|304410057|ref|ZP_07391676.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307302230|ref|ZP_07581988.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|304351466|gb|EFM15865.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306914268|gb|EFN44689.1| OmpA/MotB domain protein [Shewanella baltica BA175]
          Length = 196

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F+ + +         L  +   LA +   +++ GHTD          N++LSL RA +
Sbjct: 91  VYFEFAIAEVDFSQWKTLALVKAYLAANDVALTLVGHTD---IVGTPEFNYQLSLQRAQN 147

Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++L++  G + +R   + G         +        NRR+  +V ++
Sbjct: 148 VKRILVEDYGFNPNRF-TVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196


>gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii]
          Length = 332

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE +  L  + + +           + G+TD          N +LS 
Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNQKLSE 265

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334
            RA +    L+  G+   ++  I G                N               RR+
Sbjct: 266 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 320

Query: 335 DILVEDRQ 342
           ++ V   Q
Sbjct: 321 EVRVTGVQ 328


>gi|262375579|ref|ZP_06068812.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
 gi|262309833|gb|EEY90963.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
          Length = 190

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+    E +  LQ   + L  +    +++ GHTD          N  L   RA + 
Sbjct: 82  FDYDSTELSNEDLNTLQAHAQFLMANANSRVALTGHTDER---GTREYNMALGERRAKAV 138

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
              L+ +GV+  ++  +S +       A    N+   NRR++I
Sbjct: 139 ESFLVTTGVNPGQLEAVS-YGKEMPINAGHDENAWKENRRVEI 180


>gi|160939630|ref|ZP_02086978.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437421|gb|EDP15185.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
           BAA-613]
          Length = 281

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 18/218 (8%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCK-STDLEKSINKEENYFLPPLSKEKILAMKR 188
           N+  L     +   +  +   +E           +     +       PL + +      
Sbjct: 38  NLTKLEEVASAMQRQLGIEAKTEIEDVPSDLKYPVVGEGAQAPEDAEAPLQQTQQQYQAS 97

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            + + D+A+ I +       D      +   +   + I   +     +F   ++     +
Sbjct: 98  AREMADMARDIQTYFDSENLD-----AVVTNSENAVYIRFKNDL---LFAPDNANLTDAS 149

Query: 249 IVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
             +L  +G +L    + I    I GHT  +   N   ++  LS +RA +    L +  G+
Sbjct: 150 KSMLDAVGIMLKEKQDNILAIYINGHT--AQAANSLINDRLLSSERADNVAIYLEEQVGI 207

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              ++    G+  +     +        NRR+D+++  
Sbjct: 208 PPKKLI-CRGYGKYYPIADNTTREGREQNRRVDMIILG 244



 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 64/214 (29%), Gaps = 7/214 (3%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                      W   YAD +T+++ FF++++ I+  +    + +                
Sbjct: 2   KRQKDEEGGQEWLNTYADMITLVLTFFVLLYSISNVNLTKLEEVASAMQRQLGIEAKTEI 61

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
                      S      +       +++      +  Q +   R   ++     +    
Sbjct: 62  EDV-------PSDLKYPVVGEGAQAPEDAEAPLQQTQQQYQASAREMADMARDIQTYFDS 114

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
              +++  +SE    +    DL  + +            + +  M ++K+   LA  I+ 
Sbjct: 115 ENLDAVVTNSENAVYIRFKNDLLFAPDNANLTDASKSMLDAVGIMLKEKQDNILAIYING 174

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             +      I   +L       + I + +Q   P
Sbjct: 175 HTAQAANSLINDRLLSSERADNVAIYLEEQVGIP 208


>gi|187919311|ref|YP_001888342.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187717749|gb|ACD18972.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 222

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 9/139 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                      K++ S L+ L  +   + +       G+ I+I  +    +F+   +  L
Sbjct: 71  EAAPATPDASKKQLLSLLAPLRDN---RQITISNAAQGVEIAINAK---ILFNSGDARLL 124

Query: 246 PETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG 303
           PE+  VL +I  VL       I + GHTD  P        NW LS  RA +  +     G
Sbjct: 125 PESSDVLNQIAGVLRERSKNNILVEGHTDNVPISTAKYESNWELSSARAGAVVRFFADKG 184

Query: 304 VSEDRISKISGFAHHRLKI 322
           +   R++ I G A +   I
Sbjct: 185 IEAHRMAAI-GRADNFPLI 202



 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
          D+     G W I Y+D +T LM  FL ++++        +   
Sbjct: 21 DEGEEESGRWLISYSDLITTLMVLFLALYVLQLAKTRELEIKA 63


>gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 367

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338
            RA +    ++  GV+   ++ + G+        +               + +RR++I V
Sbjct: 301 KRAETVANYIVFKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|129142|sp|P24755|OMPA_SEROD RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II
 gi|152839|gb|AAA26561.1| outer membrane protein II [Serratia odorifera]
          Length = 243

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 19/124 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L+        + + G+TD          N +LS
Sbjct: 123 KSDVLFNSAKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPV---GKDAANQKLS 179

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMN-----SANRRIDI 336
             RA S    L+  G+  D+IS   G         S                + NRR++I
Sbjct: 180 EARARSVVDYLVSKGIPADKISA-RGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEI 238

Query: 337 LVED 340
            V+ 
Sbjct: 239 EVKG 242


>gi|325067556|ref|ZP_08126229.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 336

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290
               F   S     +   VL  + E +        ++I GH D          N  LS  
Sbjct: 46  GDVTFATDSDQLSAQADSVLATVVEQIKKYPSGGELTITGHIDDV---ADDAHNQDLSER 102

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           RA +  + L K          +SG      ++A+D       NRR++I +   +
Sbjct: 103 RAKAVSERLKKLTDLSAWKESVSGKGESSPRVANDTDEHRQINRRVEITLTPSK 156


>gi|254461106|ref|ZP_05074522.1| peptidoglycan-associated lipoprotein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677695|gb|EDZ42182.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 172

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F+  +S    +  ++L      L  +++    I GH D          N  L   R
Sbjct: 62  DRVLFEVDTSTLTGQGRLILDGQTRWLTTNSDYTAIIEGHADEQ---GTREYNVALGERR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A      L+  GV   R+ ++  +   R     + +   + NRR
Sbjct: 119 ANEVRDYLVSKGVPSSRL-RVVSYGKERPIEICSQEGCYAKNRR 161


>gi|116620548|ref|YP_822704.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223710|gb|ABJ82419.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 262

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 22/228 (9%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + +T    Q +  +       N QQ E  +N + +  E+ ++   +     S   +    
Sbjct: 26  VRNTTAPVQAKVDQVGDQTTRNGQQIEDTRNQVKQVDERAQNGISAAQERASSADQHAAT 85

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               + E +    +  +L +   +  ++L  +V++     +                   
Sbjct: 86  ADQHAGEAMTRANQANQLGEQNTQALNSLKSVVSNIDDYKLQTSVAVP------------ 133

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F  +      +    L K+   +       I++ G+TD +        N  LS  RA 
Sbjct: 134 --FQFNKYNLSSDAKQDLDKLASDVKSDKRYFIAVEGYTDKT---GSKAYNSALSRRRAD 188

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338
           +  + L+    V   RI  I G    +      +    + NRR+++ V
Sbjct: 189 AVVEYLVAQHDVPIYRIHMI-GLGDEKPVDEAKNRAARAKNRRVEVKV 235


>gi|325577896|ref|ZP_08148129.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
 gi|325160326|gb|EGC72453.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
          Length = 366

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  I   +A      +++ G+TD          N +LS  RA S 
Sbjct: 253 FAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRI---GKDAPNLKLSQRRADSV 309

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342
              L+  GV    IS + G         S               + +RR++I V   +
Sbjct: 310 ANYLVAKGVPAQNISAV-GHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAVNGTK 366


>gi|257094585|ref|YP_003168226.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047109|gb|ACV36297.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 184

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+ +S+   P+    L  +G  L     +    +I GH+D          N RLS  RA 
Sbjct: 80  FETNSASLTPKGKQSLDVVGRALNSEKLTAYKFAIEGHSDPR---GGEDYNLRLSQARAE 136

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           S    L     +   R+  + G    +L   + P    NRR+ I
Sbjct: 137 SVVGYLEQSHQIEPARLKPV-GKGPTQLLNPARPEAPENRRVTI 179


>gi|27365501|ref|NP_761029.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
 gi|37680458|ref|NP_935067.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
 gi|320155883|ref|YP_004188262.1| 18K peptidoglycan-associated outer membrane lipoprotein [Vibrio
           vulnificus MO6-24/O]
 gi|27361649|gb|AAO10556.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
 gi|37199206|dbj|BAC95038.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
 gi|319931195|gb|ADV86059.1| 18K peptidoglycan-associated outer membrane lipoprotein/
           Peptidoglycan-associated lipoprotein precursor/ Outer
           membrane protein P6/ OmpA/MotB precursor [Vibrio
           vulnificus MO6-24/O]
          Length = 181

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 81  FAFDNATISSDYEEMLAAHAAYLSKNVNLKVTIEGHADER---GTPEYNIALGERRAQAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+I  I  +   +  +        + NRR  ++
Sbjct: 138 AKYLQALGVQADQI-AIVSYGEEKPLLLGQTEEVYAKNRRAVLV 180


>gi|85714376|ref|ZP_01045364.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85698823|gb|EAQ36692.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 154

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+   +   P+ I  L+K    L        +I GH D          N  L   R
Sbjct: 46  DRVFFESDQTSLSPQAITTLEKQARWLQTYNRYSFTIEGHADER---GTREYNIALGARR 102

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L   G+   R+  IS +   R     +D    S NRR
Sbjct: 103 AQTVRSFLASRGIDPGRMRTIS-YGKERPVAVCNDISCWSQNRR 145


>gi|296282485|ref|ZP_06860483.1| hypothetical protein CbatJ_02635 [Citromicrobium bathyomarinum
           JL354]
          Length = 305

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 65/280 (23%), Gaps = 19/280 (6%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
           Q +          +        P E S+  +          ++   +++ + +  K    
Sbjct: 34  QQWADTSAETTADTTLTVTGMLPDEISNLPEGPEIDGFISARSDNRIQVTTEDGAKTVVF 93

Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
           +       +        + SL  +            ++              S  K  A 
Sbjct: 94  VSPETEIKARGGFLGLARTSLEDEQLYNGVPVTVRTVQWEDGLIAQRISMKDSDLKTAA- 152

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                       I        A+              I    +       FD        
Sbjct: 153 -----------MIQRGTEQGFAEQTAATEALRGRVADIDNYNVKGTTNVYFDTGEYKLSG 201

Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
           +    L             +  + G+TD++        N  LS  RA      L +  G 
Sbjct: 202 QAQAELCSAAAQADQMDNALLLVVGYTDST---GSYEINQELSEKRAERVVNYLQQQCGW 258

Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              R+   +G A       +        NRR+ + +   +
Sbjct: 259 KPYRMLTPTGMAQADPVADNSTDYGKQQNRRVAVNILVSK 298


>gi|170697118|ref|ZP_02888213.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170137954|gb|EDT06187.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 171

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
                +FD       P+   ++++IG  L  +    + + G++D          +  LS 
Sbjct: 62  SSGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDE---GEVAYDLELSR 118

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
            RA      L+  G+   RI  + G         +      + NRR  I+V  R
Sbjct: 119 RRAEVVAIELVDVGLDGKRI-AVVGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 171


>gi|313674920|ref|YP_004052916.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941618|gb|ADR20808.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 639

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+++S+   P+    L K+ + L    E    I GHTD+         N  LS +RA + 
Sbjct: 531 FEENSAKLRPDMYSDLDKVVDFLLDYPEFKLKISGHTDS---SGDELRNKSLSQERADAI 587

Query: 296 YQV-LMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDRQ 342
               ++   + E+R+    G+ + +  +    +D     NRR++  +   +
Sbjct: 588 RDYIIILHPIEEERVVA-EGYGNSQPVVEEEITDDDRRLNRRVEFEIYRPK 637


>gi|171914446|ref|ZP_02929916.1| OmpA/MotB [Verrucomicrobium spinosum DSM 4136]
          Length = 323

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD + +   PE+   L ++ +++       + + GHTD          N  LS  R
Sbjct: 217 HGVFFDTNRTEVKPESKPALDEVAKLMTEDPALKVLVVGHTDTV---GGFEPNRSLSERR 273

Query: 292 AYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           A +    L  K G+S +R+    G ++      +      + NRR++++
Sbjct: 274 AAAVVAELKAKYGISAERLFSF-GVSYAAPAATNSTEEGRAQNRRVELV 321


>gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565]
 gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565]
          Length = 345

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 18/125 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    +    E +  L  + + +           + G+TD         +N RLS 
Sbjct: 222 SDVLFAFGKADLKQEGMSALDDLYQQIVDVQPKDGSAVVIGYTDRI---GSDANNQRLSE 278

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    L+  G+  D++  I G         +  D + +          +RR+++ V
Sbjct: 279 ARAQTVADFLISKGLPADKV-SIQGNGASNPVTGNQCDAIKAKAALIDCLGPDRRVEVRV 337

Query: 339 EDRQG 343
              QG
Sbjct: 338 TGVQG 342


>gi|255536293|ref|YP_003096664.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
           3519-10]
 gi|255342489|gb|ACU08602.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
           3519-10]
          Length = 477

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  S   LP    +L      +  S    S+ G TDA         N  LS  RA +  
Sbjct: 371 FDFDSDRILPSNTPILNNAVNYINTSNGNYSVIGGTDA---SGSEAYNQGLSERRANTVK 427

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA--SDP------MNSANRRI 334
             L+++GV   ++  + G     LK    +         N ANRR+
Sbjct: 428 NYLIQNGVESAKLQSV-GRGEKELKYPECNPTSKCPEWKNRANRRV 472


>gi|156977089|ref|YP_001447995.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
 gi|156528683|gb|ABU73768.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
          Length = 1211

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 56/192 (29%), Gaps = 14/192 (7%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
                     +  +   ++   +  +    +  +  ++  +   + L   + D  V+   
Sbjct: 189 QAAQGSAHGDLLSKIQEYMATTASVQADKAQAFQGTEEKYQNAVNQLRNEMPDLFVEEGS 248

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
               +    + +        FD             + +  + L  +   I I GHT    
Sbjct: 249 VSLDQRVEDVLLRLNMTFFEFDSYQVTEKGSVHKRIAEQLQALISNPFEIVITGHTCNM- 307

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR--------ISKISGFAHHRLKIASDP-- 326
                  N  LS  RA S  + ++ +   + R        I    G+A       +    
Sbjct: 308 --GSEAYNLALSEKRAVSVKEAILDAMSPDARSVWSPLFKIVA-KGYAVSLPGNTNRTIE 364

Query: 327 MNSANRRIDILV 338
               NRR++I +
Sbjct: 365 ERVKNRRVEIYL 376


>gi|21244837|ref|NP_644419.1| hypothetical protein XAC4120 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110541|gb|AAM38955.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 451

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 10/148 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +   LS      +++       +T + +S     +  MF         +   ++ +I   
Sbjct: 310 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVELQQRGLIAQIAAA 364

Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +      + + GHTD  P R+   +DN+ LS  RA +  QVL     +  R+  I G   
Sbjct: 365 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAI-GAGA 423

Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342
            +            + NRR++IL +  +
Sbjct: 424 SQPIAQPVQLPANRARNRRVEILFQPGE 451


>gi|302184719|ref|ZP_07261392.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 300

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +             ++   + NRR+ + +E 
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVSVHLER 281


>gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
 gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
          Length = 363

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + +   P     L  I   +A   +    + G+TD          N +LS  RA + 
Sbjct: 250 FAFNKANLRPNAQATLDGIYSEIAKVNKPNVAVSGYTDRI---GSDAYNQKLSQKRAETV 306

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342
              L+  GV++D IS  +G+        +               + +RR++I V   Q
Sbjct: 307 ANYLVSKGVAQDTISA-TGYGKANPVTGNQCNAVKGRKALIACLADDRRVEIAVNGNQ 363


>gi|124010476|ref|ZP_01695114.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
           23134]
 gi|123982378|gb|EAY23917.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
           23134]
          Length = 645

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           Q  T  +D       P+ +  L ++  +L  +    I +  HTD+    N ++ N +LS 
Sbjct: 531 QVKTIYYDLDKYFIRPDAVKTLDELLVILYRNPKMRIGLSSHTDSR---NTSKYNVQLSQ 587

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            R+ SA Q L+  G+S  RI  +  F   +L          ++  +  NRR ++LV +
Sbjct: 588 RRSQSALQYLVSRGISPQRII-VDWFGETKLVTPCPDGVPCNETQHQLNRRTEVLVLE 644


>gi|110638992|ref|YP_679201.1| outer membrane peptidoglycan-associated protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110281673|gb|ABG59859.1| outer membrane peptidoglycan-associated protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 710

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++ + +    E    +  I    L     + I I  HTD        + N  LS  RA  
Sbjct: 601 YETNQTDLNDEAKAAIDNILIPFLKEHPTDKIIISSHTDDV---GSHKYNENLSDQRALK 657

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDILV 338
             Q L++ G+S  +I    G+   +   +        ++   S NRR + L+
Sbjct: 658 VMQYLIQKGISAKQIQA-KGYGETKPIASNINPDGSENEIGRSINRRTEFLI 708


>gi|329295648|ref|ZP_08252984.1| putative outer membrane lipoprotein [Plautia stali symbiont]
          Length = 157

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + S   P +   + ++ + LA +  E + +  HTD       A  N +LSL R
Sbjct: 49  DKILFGINESDLTPASKASIAQMAKSLAATGIEHLRVDCHTDNY---GKADYNQQLSLKR 105

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +             +     G        +++     + NRR+ I++   
Sbjct: 106 ANAVADQWATGAAIPRQNIVTRGLGMSAPVASNNTAQGRAQNRRVAIVITAP 157


>gi|127512023|ref|YP_001093220.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126637318|gb|ABO22961.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 367

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 8/128 (6%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
              V          ++   +  +  F  +S++    +   ++K+   +  +    + I G
Sbjct: 231 NHKVDANGCTVYREVTEKHELGSIRFANNSAVVNSASYGQIEKLANYMNQNPRATVLIGG 290

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS 329
           H            N  LS  RA +  ++L+ K G+S+DR+S   G+   +  I      +
Sbjct: 291 HASNV---GNPDYNMDLSERRANAVAELLVSKYGISQDRVSA-KGYGITQPLIEGKSAEA 346

Query: 330 --ANRRID 335
             ANRRI+
Sbjct: 347 NKANRRIE 354


>gi|319779140|ref|YP_004130053.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
           equigenitalis MCE9]
 gi|317109164|gb|ADU91910.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
           equigenitalis MCE9]
          Length = 166

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           Q  +  F   S    PE   ++Q   + L+ +      + G+TD    R  +  N  L  
Sbjct: 58  QNKSVYFAFDSYTVEPEYNEMIQMHAKYLSSNPTRTVRVEGNTD---LRGSSEYNLALGQ 114

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            R+ +  ++L + GV+  ++  +S F   R +   +     + NRR DI
Sbjct: 115 RRSVAVARLLNQYGVNSAQLEAVS-FGKERPQATGNSEEAHAQNRRADI 162


>gi|148475217|dbj|BAF63174.1| major outer membrane protein OmpAI [Aeromonas veronii]
          Length = 340

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F        PE +  L  + + +           + G+TD          N +LS
Sbjct: 216 NSDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 272

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337
             RA +    L+  G++  ++  I G         +        +        +RR+++ 
Sbjct: 273 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVR 331

Query: 338 VEDRQ 342
           V   Q
Sbjct: 332 VSGVQ 336


>gi|124002746|ref|ZP_01687598.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123991974|gb|EAY31361.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 775

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S          L K+   L  + +  + + G++D        + N  LS DRA + 
Sbjct: 672 FKFGSRKIEKYCHPSLDKLVNFLETNPKVKVELAGYSDEL---GSKKGNVGLSEDRAKAV 728

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              L++ G+   R+    G+     K  +   +    NRR++
Sbjct: 729 VDYLIEKGIDFSRL-TYKGYGKVSPKHPNKTKHGRILNRRVE 769


>gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans]
 gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 346

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++       +   F    +   P+    L  I   +A      + + G+TD         
Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331
            N +LS  RA +    L+  GVS+  IS  +G         +               + +
Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGNKCDAVKGRKALIACLADD 335

Query: 332 RRIDILVEDRQ 342
           RR++I V   +
Sbjct: 336 RRVEIAVNGTK 346


>gi|126175214|ref|YP_001051363.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|153001540|ref|YP_001367221.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|160876276|ref|YP_001555592.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|217972531|ref|YP_002357282.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|125998419|gb|ABN62494.1| OmpA/MotB domain protein [Shewanella baltica OS155]
 gi|151366158|gb|ABS09158.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|160861798|gb|ABX50332.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|217497666|gb|ACK45859.1| OmpA/MotB domain protein [Shewanella baltica OS223]
 gi|315268465|gb|ADT95318.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 196

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F+ + +         L  +   LA +   +++ GHTD          N++LSL RA +
Sbjct: 91  VYFEFAIAEVDFSQWKTLALVKAYLAANDVALTLVGHTD---IVGTPEFNYQLSLQRAQN 147

Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++L++  G + +R   + G         +        NRR+  +V ++
Sbjct: 148 VKRILVEDYGFNPNRF-TVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196


>gi|319940886|ref|ZP_08015225.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805768|gb|EFW02549.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
          Length = 176

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
            +  F   S    PE   V++   + LA + EV  + +G+TD          N  L   R
Sbjct: 60  RSVYFAFDSYEVSPEYAAVVEAHAKWLAANPEVKIVIQGNTDER---GGREYNLALGQKR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           + +  Q L   G+   RI  +S F   +      S+   + NRR DI+
Sbjct: 117 SEAVLQRLQLLGIPSSRIEAVS-FGKEKPIALGHSEEAWAQNRRADIV 163


>gi|153831593|ref|ZP_01984260.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148872103|gb|EDL70920.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 350

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   ++       I + GHTD          N  +S  RA  
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNV---GSQLANLNVSRQRAEQ 268

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
             + L++ GV    + ++          +++     + NRR+ + +   
Sbjct: 269 VAEALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRD 316


>gi|119478304|ref|ZP_01618335.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [marine gamma proteobacterium HTCC2143]
 gi|119448644|gb|EAW29889.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [marine gamma proteobacterium HTCC2143]
          Length = 300

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
            R+   F  +      +    L  +   +    S     I GHTD+         N  LS
Sbjct: 188 NRSRVHFITAKFELTRDAKTQLDDVVRYVKADSSVTGFYIDGHTDSI---GRRLYNLELS 244

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             RA +  + L+ +GV E  +            I +    +   NRR+ + +E 
Sbjct: 245 KQRAEAVTKYLVSNGVDEA-MITTRYHGERYPVIDNSSAKNRYANRRVTLRLER 297


>gi|319778081|ref|YP_004134511.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171800|gb|ADV15337.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 176

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+         L +  + L  +        + G+TDA+        N  LS  RA 
Sbjct: 74  FGLDSAELDATARAELDEFAKALKDNRLSTFSFVVEGYTDAT---GTVHHNEGLSQRRAK 130

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           S    L  SG+  DRI+ + G      + ++ P +  NRR+++ ++
Sbjct: 131 SVAAFLTASGIEPDRINAV-GMGEKNPRSSN-PYDPLNRRVEMRIK 174


>gi|260772528|ref|ZP_05881444.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           metschnikovii CIP 69.14]
 gi|260611667|gb|EEX36870.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           metschnikovii CIP 69.14]
          Length = 179

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++        +L      L+ +    +++ GH D          N  L   RA + 
Sbjct: 79  FAFDNATIARSYEEMLAAHAAYLSKNPSLKVTVEGHADER---GTPEYNIALGERRANAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  ++IS +S +   +  +        + NRR  ++
Sbjct: 136 AKYLEALGVQANQISIVS-YGEEKPLVLGQTEEAYAKNRRAVLV 178


>gi|103485822|ref|YP_615383.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98975899|gb|ABF52050.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 170

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD        +    LQ   + L  +    +++ GH D          N  L   R
Sbjct: 63  DRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADER---GTRDYNIALGERR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338
           A +A   L   G+   RI+ +  +   R     +++   + NRR + +++
Sbjct: 120 ANAAKNYLASLGIDPSRIN-VISYGKERPAAIGSNEEAWAQNRRAVTVVI 168


>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
 gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
          Length = 353

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N  LS
Sbjct: 225 KSDVLFNFNKATLKPEGQRSLDQLYSQLSTLDPKDGSVVVLGFTDRL---GSDQYNQTLS 281

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA +    L+  G+  ++IS   G             +    +A       +RR++I 
Sbjct: 282 TKRAQTVVDYLVHKGIPANKISA-RGMGKANPVSGSTCTNVKARAALIDCLAPDRRVEIE 340

Query: 338 VED 340
           V+ 
Sbjct: 341 VKG 343


>gi|209546431|ref|YP_002278321.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209539288|gb|ACI59221.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 642

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 69/257 (26%), Gaps = 14/257 (5%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
              + ++Q ++         +     +  +  +          + + +++   E   ++ 
Sbjct: 387 GQFQVNAQRRVAALRLAAAQEMMAANQPVTDYEPLLVAADSPQVLWQASATLGEIYFSAR 446

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                          ++      +      +S     A + +    +             
Sbjct: 447 RFADAAADYQQAIEIIKNETRTPKAPPADTISDLIQRAAQARILAANPTSDNPQGSFVPA 506

Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265
             +   GVL       +  I  +       FD + S          Q++ E L       
Sbjct: 507 EKDHRSGVLGGIYSENVRGIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGR 566

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + + GHTD          N +LS  RA +    L  +G+         G         + 
Sbjct: 567 VILIGHTDRR---GGDDYNQKLSERRAQAVADFLKSNGIDAS--IDAEGRGASEPVDVTA 621

Query: 326 PM-------NSANRRID 335
                    ++ NRR++
Sbjct: 622 TANLTEDDVDALNRRVE 638


>gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
 gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
          Length = 358

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYSQLSSIDPKDGSVIVLGYTDRI---GSEQYNQKLS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDIL 337
             RA S    L+  G+  ++IS   G            D +            +RR++I 
Sbjct: 287 EQRAQSVVDYLVSKGIPANKISA-QGQGKSNPVTGSTCDSVKGRAALIDCLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|28900403|ref|NP_800058.1| hypothetical protein VPA0548 [Vibrio parahaemolyticus RIMD 2210633]
 gi|308095573|ref|ZP_05906887.2| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|308125408|ref|ZP_05775064.2| OmpA family protein [Vibrio parahaemolyticus K5030]
 gi|308126617|ref|ZP_05911271.2| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|28808714|dbj|BAC61891.1| putative protein F-related protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085093|gb|EFO34788.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|308107912|gb|EFO45452.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|308113845|gb|EFO51385.1| OmpA family protein [Vibrio parahaemolyticus K5030]
          Length = 208

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           G  L  +      +   E  +           + +  R  +      ++L   +  + + 
Sbjct: 26  GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQTARAAEKKSNNVTSLEMFLDRHNIP 85

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
                     ++I + +Q +   F   S+     +   L+K+G  LA  T+V  +  GH 
Sbjct: 86  HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 140

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D++     A  N  LS  RA    + ++ S +   R+    GF  +  + ++   +    
Sbjct: 141 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 196

Query: 331 NRRIDILVEDRQ 342
           NRR+++++   +
Sbjct: 197 NRRVELMLIVDE 208


>gi|114321319|ref|YP_743002.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227713|gb|ABI57512.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 276

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 15/144 (10%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVI 266
           + + + +  E T     +         +FD  S++   E    ++++   L       ++
Sbjct: 132 EIMAENLARERTVEVERVVYRTLSTDVLFDFDSAVLRAEGQDTIREVAAGLQKEFIDPLV 191

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            I GHTD          N RLS  RA +    L+K+G S   +    G       +  + 
Sbjct: 192 VIVGHTDRIGDPG---YNQRLSERRADAVMDALLKNGFSRRDVVA-QGRGEAEPVVFCEG 247

Query: 327 MNSA---------NRRIDILVEDR 341
             +          NRR+++ V +R
Sbjct: 248 DRATPALIACLSPNRRVEVQVLER 271


>gi|213971390|ref|ZP_03399504.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
 gi|213923833|gb|EEB57414.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
          Length = 417

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      SS    D          +   K  +T            
Sbjct: 57  QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 116

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K          K    +   +   + +  +      ++         
Sbjct: 117 WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 176

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 177 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVD---SSFNPDRPAMLLPNTL 233

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 234 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 290

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 291 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 320


>gi|253688926|ref|YP_003018116.1| OmpA domain protein transmembrane region-containing protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755504|gb|ACT13580.1| OmpA domain protein transmembrane region-containing protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 366

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +    E    L ++   L+        + + G TD        + N  LS
Sbjct: 238 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 294

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  +++S   G    +        +    +A       +RR++I 
Sbjct: 295 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 353

Query: 338 VED 340
           V+ 
Sbjct: 354 VKG 356


>gi|254475683|ref|ZP_05089069.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214029926|gb|EEB70761.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 177

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S         L      L  + + I +I GH D          N  L   R
Sbjct: 67  DRVLFAVDQSTLSEAAKATLVGQARWLTSNPDYIVTIEGHADEQ---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A + L+  GV+  R+ ++  +   R     +++   + NRR
Sbjct: 124 ANAAREFLISQGVAGSRL-QVVSYGKERPLEICSNEACYAKNRR 166


>gi|78484731|ref|YP_390656.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78363017|gb|ABB40982.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
          Length = 248

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   ++ P   G+W+I  AD MT LM FFLVMW+ +  D D +KA  +           
Sbjct: 3   RRQRHEECPEEGGAWEIALADLMTTLMVFFLVMWLTSIVDPDKRKAFVEAL---VGEGAG 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                 DE N P   S  K DL             K+   +   +       I   S+S 
Sbjct: 60  GENISADETNTPREPSIMKEDLKPVSTEEIQQAMSKVNPKDIDIEDTPDYTKITLRSDSF 119

Query: 139 QSEHCKNSLTRDSEKGKDLCKS 160
                     +  E+ + L ++
Sbjct: 120 FESGRATITDKTREQLEQLGET 141



 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +DL    +  +   ++    K +  E T     I++        F+   +    +T   L
Sbjct: 79  EDLKPVSTEEIQQAMSKVNPKDIDIEDTPDYTKITLRSD---SFFESGRATITDKTREQL 135

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           +++GE LA   + ISI G+TD+ P  N     NW LS  RA +  +  +  GV ++ +  
Sbjct: 136 EQLGETLAGRDQEISITGYTDSIPIENLQFPSNWELSAARAATVARTFIYMGVDKN-LVT 194

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           ISG A +     +      S NRR+ I++ +++
Sbjct: 195 ISGKADNDAVAPNATAYGRSLNRRV-IILVNKK 226


>gi|84393403|ref|ZP_00992162.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
           12B01]
 gi|84376012|gb|EAP92901.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
           12B01]
          Length = 293

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 93/307 (30%), Gaps = 23/307 (7%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T  M  F ++        + +           ++          E             
Sbjct: 5   LITGSM-LFSLLMSSPVMAQEKRYGAS-----PQQSTWEMVANTPLECRLVHPIPNFGDA 58

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
                   K  +D ++         + +                + +  +  ++      
Sbjct: 59  EFSSRASKKIILDFELKMRRPMGATRNVSLISMPPPWRPGESADRMTTIKFFQQFDGYVG 118

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                  +++ E    P  S ++  +  ++  +      +SS L     +     V    
Sbjct: 119 GQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVS-----LSSVLFQEKYNVFSDCVANLL 173

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPF 277
             +   IS         +D++S      +   L +I + + ++ ++  +    +TD+   
Sbjct: 174 PYSFEDISFTILH----YDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDS 229

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           + I+     LS  RA S  +     G+ EDRI ++ G+   R    ++       NRR+ 
Sbjct: 230 KGIS---QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNNSPIGKDKNRRVV 285

Query: 336 ILVEDRQ 342
           I +   Q
Sbjct: 286 ISLGRTQ 292


>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 361

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +    E    L ++   L+        + + G TD        + N  LS
Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 289

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  +++S   G    +        +    +A       +RR++I 
Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348

Query: 338 VED 340
           V+ 
Sbjct: 349 VKG 351


>gi|163781628|ref|ZP_02176628.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882848|gb|EDP76352.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 224

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 17/152 (11%)

Query: 197 KKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           K+++  +   V   +         T   + + + D+     F+  +    P+    L ++
Sbjct: 73  KEVALKIKRRVQKVLPPWAFQIVITADFVKLRLFDK---VFFEDGTYQLTPKAREALVEV 129

Query: 256 GEVLAHSTE--VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             VL    E   I + GH  +         RD W LS+ RA    + L   GV   ++S 
Sbjct: 130 ANVLKKLPENSFIRVEGHVSSLVEVRGRVVRDKWELSVRRATEVVRFLQAQGVEPTKLSA 189

Query: 312 ISGFAHHRLKIASDPMNS-----ANRRIDILV 338
             G+   +                N R++I +
Sbjct: 190 A-GYGDIKPLY---TWRQPILMERNNRVEIYI 217



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 33/75 (44%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +      +W   ++D M++L+ FF++++ +++ D    +    YF P  K  +  + 
Sbjct: 4  KKKEECPKPPAWLTSFSDLMSLLLTFFILIYAMSSLDVAQLEKFISYFQPERKMFVRKTS 63

Query: 82 GIFDEQNPPERSSQN 96
           +     PP+  +  
Sbjct: 64 ILPPIAPPPKEVALK 78


>gi|300692122|ref|YP_003753117.1| outer membrane protein, ompA domain [Ralstonia solanacearum PSI07]
 gi|299079182|emb|CBJ51850.1| putative outer membrane protein, ompA domain [Ralstonia
           solanacearum PSI07]
          Length = 218

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++  PE    L  +   L + T  + I  GHTD+       + N RLS+ RA
Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSA------NRRIDILVEDRQ 342
            +    L+  G+  +R+    G    +LK+          +       NRR+++ V   +
Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGSRKAQIACQQPNRRVEVEVVGTR 215


>gi|148284999|ref|YP_001249089.1| peptidoglycan-associated lipoprotein precursor [Orientia
           tsutsugamushi str. Boryong]
 gi|146740438|emb|CAM80934.1| peptidoglycan-associated lipoprotein precursor [Orientia
           tsutsugamushi str. Boryong]
          Length = 202

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 11/158 (6%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +    + ++   I++  S  V  N  +   +   +    +  I +++   F         
Sbjct: 44  EDNDDIAEIVSSINAESSDQVTSNNAQQEGYVDVKHEQFLQAIHRKHKVYFATEKFDLSE 103

Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           E+  VL+   + L ++ +  I I GH D          N  L   RA S  Q L+  GVS
Sbjct: 104 ESKRVLRAQSDWLKNNPDVKIIIEGHCDER---GTREYNLALGKKRADSVKQFLVTLGVS 160

Query: 306 EDRISKISGFAHHRL---KIASDPMNS--ANRR-IDIL 337
            D+I   S +   +        +   +   NRR + I+
Sbjct: 161 RDKIETTS-YGKDKPEVEVTKDNKDEAYRLNRRSVTII 197


>gi|187479386|ref|YP_787411.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
 gi|115423973|emb|CAJ50526.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
          Length = 165

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           SI+ Q+ +  FD  S     +   +++     LA   +    I G+TD       A  N 
Sbjct: 53  SILAQQRSVYFDFDSYGVSDQYRGLVETHARYLASHPQQRIKIEGNTDDR---GGAEYNL 109

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            L   RA +  +++   GV++ +I  IS F   + K         + NRR DI+
Sbjct: 110 ALGQRRADAVRRMMTLLGVADAQIEAIS-FGKEKPKATGSTEADFAENRRADIV 162


>gi|170737617|ref|YP_001778877.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|169819805|gb|ACA94387.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
          Length = 170

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +    + + G++D       A  +  LS  R
Sbjct: 63  EPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDAELSRRR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G         +      + NRR  I+V  R
Sbjct: 120 AEVVAVELVDVGLDAKRI-AIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170


>gi|120603975|ref|YP_968375.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120564204|gb|ABM29948.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
          Length = 259

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 41/205 (20%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             +++K    ++   L +  K  +  L+ L     +KGV     +   L+ I       +
Sbjct: 52  EAAEQKQELTEKYDELTNARKTRAEMLTSLERSLKMKGVEVSIDKDHGLLHI---PEGIL 108

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI------------------------SIRGHT 272
           FD  S+   PE    L  I E L+                               + GHT
Sbjct: 109 FDSGSAALPPEGGRTLDIIAEQLSTLLPCYSGKADAPAPDECRDNYKPGRLEAVFVEGHT 168

Query: 273 DASPF--RNIARDNWRLSLDRAYSAYQVLMKS--------GVSEDRISKISGFAHHRLKI 322
           D  P   R   +DNW LS  RA + Y+ L+           +  D +  +SG+A  R + 
Sbjct: 169 DNVPMPPRGGIQDNWDLSTKRAVTTYRHLLGHAPTLAAFVNLDGDPLFGVSGYAASRPRN 228

Query: 323 ASD--PMNSANRRID--ILVEDRQG 343
             D    ++ NRRID   L+   +G
Sbjct: 229 PHDTPTPDAQNRRIDLRFLLAAPRG 253


>gi|157826223|ref|YP_001493943.1| peptidoglycan-associated lipoprotein precursor [Rickettsia akari
           str. Hartford]
 gi|157800181|gb|ABV75435.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia akari
           str. Hartford]
          Length = 155

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E   ++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSSLSPKAKEELERQACWLSKHPEVKATVEGHCDER---GTREYNLGLGERRAEAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L+  G+   R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 KKFLVHKGIDHSRLNTIS-YGKDRPAMIGNTEEAFAYNRRAVTVV 153


>gi|312963125|ref|ZP_07777610.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
 gi|311282636|gb|EFQ61232.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
          Length = 229

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 28/230 (12%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             E    ++S S         +           K+ +   ++ K++        + K  A
Sbjct: 1   MKEKPNEWVSISDLMAGVMAVVMLMLVVSVLQNKAAEAAMAVEKQQMEAARQEERSKGDA 60

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            +R    + LA   S        D      L +       +++ D      F + S+   
Sbjct: 61  AQRASLSKLLAAMQSDLQRTGETD------LVDIDIQNRRLTLPDNA----FARGSACIT 110

Query: 246 PETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI----------ARDNWRLSLD 290
           P     L  +   +A          + + GHTD  P                DN+ LS  
Sbjct: 111 PAAQGALTLLSARVATFIKDYGQGQVLVEGHTDNLPVSRPVTDYERFCTVYDDNYTLSAA 170

Query: 291 RAYSAYQVLMKSGVSE--DRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RA  A ++L+++ +     R   ++G+   R K   DP ++ NRR+++ +
Sbjct: 171 RAREARKLLIQA-IEPQQARRVVVAGYGDSRPKPGIDPASALNRRVEVQL 219


>gi|260363437|ref|ZP_05776283.1| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|260876568|ref|ZP_05888923.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|260895072|ref|ZP_05903568.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308086012|gb|EFO35707.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308093570|gb|EFO43265.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308113744|gb|EFO51284.1| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|328473927|gb|EGF44744.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
          Length = 205

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S    P     ++++ + L       I ++G+   +     +  N  LS  RA
Sbjct: 82  RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
            +  + L+++G++ DR+  I G+        +       + NRR+   V   +G
Sbjct: 139 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190


>gi|309780841|ref|ZP_07675582.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
           5_7_47FAA]
 gi|308920523|gb|EFP66179.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
           5_7_47FAA]
          Length = 167

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    PE   +L +    L    +    I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 124 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 166


>gi|302343856|ref|YP_003808385.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
           2075]
 gi|301640469|gb|ADK85791.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
           2075]
          Length = 179

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        E   +L    + L+   E  + + GH D          N  L   RA + 
Sbjct: 78  FDYDRYDLSAEAKQILNDKAQFLSQHPEVTVIVEGHCDER---GSNSYNMALGEKRARAC 134

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            Q LM  GV+ DR+ ++  +   R  +  +     +ANRR
Sbjct: 135 EQYLMAMGVASDRL-EVVSYGEERPLVPGNTEEAYAANRR 173


>gi|88860422|ref|ZP_01135060.1| putative Component of sodium-driven polar flagellar motor
           [Pseudoalteromonas tunicata D2]
 gi|88817620|gb|EAR27437.1| putative Component of sodium-driven polar flagellar motor
           [Pseudoalteromonas tunicata D2]
          Length = 290

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           +SS    E+   L KIGE L +   +  + I  +TD+         N  LS  RA +   
Sbjct: 189 NSSELTKESKKRLDKIGEYLKNDPNIESVLISAYTDSY---GGRYTNDELSKKRALTIKT 245

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            + + GV + R+ ++ GF   R    +        NRR+ I +
Sbjct: 246 YMTELGVEDKRV-EVEGFGEKRHIAPNTTILGRQLNRRVVIQI 287


>gi|308049997|ref|YP_003913563.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
           9799]
 gi|307632187|gb|ADN76489.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
           9799]
          Length = 175

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   V    ++ V             + Q +   FD   S    +   +L+     L  +
Sbjct: 41  VESGVQTGAIEQVQTPEEIQRQKYEQLRQEHIIYFDFDRSDVSGQYAELLEAHAAFLVEN 100

Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                 I GH D          N  L   RA +  + L   GV   +I+ +S +   +  
Sbjct: 101 PSTKVLIEGHADER---GTPEYNIALGERRAKAVERYLQGLGVLSSQITIVS-YGEEKPL 156

Query: 322 IA--SDPMNSANRRIDIL 337
            +  +D  ++ NRR  ++
Sbjct: 157 DSSATDAAHAKNRRAVLV 174


>gi|254439458|ref|ZP_05052952.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198254904|gb|EDY79218.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 310

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 223 GILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF 277
            +  S+ DQ    +    F   S+     +++ LQ + + L  + +    + GHTD+   
Sbjct: 187 NLSQSLEDQGRFILTGLVFQTGSAQLGDASVMSLQDLADYLIANPDRTVALVGHTDSV-- 244

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                 N  LS  RA S  + L+ +     R     G  +      +   +    NRR++
Sbjct: 245 -GSLDGNIALSKRRAGSVLERLVTTYDIPRRQLDAQGMGYLSPVATNLTEDGREANRRVE 303

Query: 336 ILVEDRQ 342
           +++   Q
Sbjct: 304 VIITSTQ 310


>gi|315110066|gb|EFT82042.1| OmpA family protein [Propionibacterium acnes HL030PA2]
          Length = 120

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P    ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 9   DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 65

Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S  RA S  +VL   +  G++       +G        ++D       NRR+ I V++
Sbjct: 66  SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 119


>gi|74095537|emb|CAJ27303.1| conserved hypothetical protein [Cronobacter sakazakii]
          Length = 536

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   S+   P     LQ +  ++         I GH+D +        N +LS+ RA 
Sbjct: 419 SLFSSGSARLRPHGPAALQPLFTLVNQHPENRFLIIGHSDNT---GNPEVNQQLSVSRAI 475

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRID 335
           +  + L+K+         I G           ++     NRR++
Sbjct: 476 AVREWLVKTTKRPATQFDIYGLGASEPVAGNDNETGRELNRRVE 519


>gi|85706710|ref|ZP_01037802.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
 gi|85668768|gb|EAQ23637.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
          Length = 170

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F+             L      L  + +  ++  GH D          N  L   R
Sbjct: 60  DRVLFEVDQPTLNATAQSTLDGQANWLMTNRDFTAVIEGHADEQ---GTREYNLALGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L+  GV+ +R+ ++  F   R     +++   + NRR
Sbjct: 117 ANAVQEYLITQGVAPNRL-RVVSFGKERPIEICSNEACYTKNRR 159


>gi|148977601|ref|ZP_01814177.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
           SWAT-3]
 gi|145963116|gb|EDK28384.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
           SWAT-3]
          Length = 284

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 92/300 (30%), Gaps = 22/300 (7%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
            F ++   +A   + +           ++          E                    
Sbjct: 2   LFSLLMSSSAMAQEKRYGAS-----PQQSTWEMVANTPLECRLVHPIPNFGDAEFSSRAS 56

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            K  +D ++         + +                + +  +  ++             
Sbjct: 57  KKIILDFELKMRRPMGATRNVSLISMPPPWRPGESADRMTTIKFFQQFDGYVGGQTAWGI 116

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +++ E    P  S ++  +  ++  +      +SS L     +     +      +   I
Sbjct: 117 LSELEKGRYPTFSYQEWQSRDQRIEVA-----LSSVLFQEKYNVFSDCIANLLPYSFEDI 171

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284
           S         +D++S      +   L +I E + ++ ++  +    +TD++  + I+   
Sbjct: 172 SFTILH----YDRNSDQLNKSSRKRLSQIAEYVRYNQDIDLVLVATYTDSADSKGIS--- 224

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             LS  RA S  +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 225 QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNSSPIGKDKNRRVVISLGRTQ 283


>gi|87118951|ref|ZP_01074849.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
 gi|86165342|gb|EAQ66609.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
          Length = 208

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
             ++   +   FD   SI  PE    L K  + L  + +   +  GH D          N
Sbjct: 96  DMLVGVAHIFYFDFDKSIVRPEAREALAKHAKFLVANPDARVVLEGHADER---GTREYN 152

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
             L   RA +  + L   GV+  +I  +S F   +            ANRR+++
Sbjct: 153 MALGERRAKAVSRYLTIQGVAAAQIESVS-FGEEKPLEFGHDKAAWQANRRVEV 205


>gi|162454745|ref|YP_001617112.1| OmpA-domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161165327|emb|CAN96632.1| OmpA-domain outer membrane protein [Sorangium cellulosum 'So ce
           56']
          Length = 129

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLD 290
               +D       PE+  VL  +  +L    E+   ++ GHTD          N +LS  
Sbjct: 22  RPIFYDLDKDEIRPESFSVLDAVANILRTHPEITALTVEGHTDNQ---GSVEHNIKLSER 78

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDILVEDR 341
           RA +  + L++ GV+        G+         +D    + NRR++  ++ +
Sbjct: 79  RANAVVRYLVQRGVATP--MTAPGYGAGAPLCFTNDEGCRAMNRRVEFRIKSK 129


>gi|153838879|ref|ZP_01991546.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149747670|gb|EDM58584.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 205

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S    P     ++++ + L       I ++G+   +     +  N  LS  RA
Sbjct: 82  RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
            +  + L+++G++ DR+  I G+        +       + NRR+   V   +G
Sbjct: 139 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190


>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
 gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
          Length = 345

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 17/121 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD + +   PE    L  +   +        V ++ GHTD          N +LS 
Sbjct: 223 SDVLFDFNKATLKPEASQALDSLYSQIEEARPKDGVATVIGHTDRI---GSDAYNQKLSE 279

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMN------SANRRIDILVE 339
            RA +    L+  G+   +I+ + G                        + +RR+D+ VE
Sbjct: 280 QRAQTVANYLVGKGIPAAKIN-VEGRGKSSPVTGDSCVSKSKRELIVCLAPDRRVDVKVE 338

Query: 340 D 340
            
Sbjct: 339 G 339


>gi|260591055|ref|ZP_05856513.1| OmpA family protein [Prevotella veroralis F0319]
 gi|260536920|gb|EEX19537.1| OmpA family protein [Prevotella veroralis F0319]
          Length = 695

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I++    +   +D   +   PE+   L  + ++L  +    I +  HTD       A  N
Sbjct: 522 INVPVLIDNIFYDFDKATLRPESEKALDDLVKLLNENPNVTIELSAHTDCI---GSADYN 578

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD--PMN- 328
            RLS  RA +    L   G+++DR++ + G+   R                 +D    + 
Sbjct: 579 KRLSQRRADAVVAYLTAHGIAQDRLTPV-GYGKERPKKIRKKLTEKYNWLKENDVLTEDF 637

Query: 329 -------------SANRRIDILVED 340
                          NRR + +V  
Sbjct: 638 IKKLPKDKQEVCNQLNRRTEFIVLR 662


>gi|157369997|ref|YP_001477986.1| outer membrane protein A [Serratia proteamaculans 568]
 gi|157321761|gb|ABV40858.1| OmpA domain protein transmembrane region-containing protein
           [Serratia proteamaculans 568]
          Length = 358

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 27/135 (20%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S    E    L ++   L+          + G+TDA       + N +LS
Sbjct: 228 KSDVLFNFNKSTLKAEGQQALDQLYTQLSAMDPKDGSAVVLGYTDAV---GSDQYNQKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMN-----SANRRID 335
             RA S    L+  G+  ++IS   G         +                 + +RR++
Sbjct: 285 EKRAQSVVDYLVSKGIPSEKISA-RGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVE 343

Query: 336 I-------LVEDRQG 343
           I       +V   QG
Sbjct: 344 IEVKGIKDVVTQPQG 358


>gi|222823242|ref|YP_002574815.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
           RM2100]
 gi|222538463|gb|ACM63564.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
           RM2100]
          Length = 161

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 8/109 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDR 291
              FD        +   V+    E+         I + G+ D          N  L L R
Sbjct: 55  NVYFDFDKFNVRSDMQKVIANNAEIFNKEAANAAIVVEGNCDEW---GTDEYNQALGLKR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           A +  + L+  GVS DRI  +  +               + NRR +  +
Sbjct: 112 AKAVKESLVAQGVSADRI-SVKSYGETNPVCTERTKACDAQNRRAEFKL 159


>gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida]
          Length = 358

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358


>gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida]
 gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida]
 gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida]
 gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida]
 gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida]
 gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida]
          Length = 358

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358


>gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida]
          Length = 358

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358


>gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida]
          Length = 358

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358


>gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida]
          Length = 351

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 208 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 267

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 268 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 323

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 324 CDSVKGRKALIACLADDRRVEIAVKGNK 351


>gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida]
          Length = 353

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVKGNK 353


>gi|58422901|gb|AAW73250.1| OmpA [Enterobacter cloacae]
          Length = 223

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G TD          N +LS
Sbjct: 115 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQKLS 171

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
             RA S    L+  G+  ++I    G         +
Sbjct: 172 EKRAQSVVDYLISKGIPANKI-SPRGMGESNPVTGN 206


>gi|260431107|ref|ZP_05785078.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260414935|gb|EEX08194.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 167

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E   +LQ   + L A++    +I GH D          N  L   R
Sbjct: 57  DRVLFAVDQSTLSSEAQSILQGQADWLLANTDYTATIEGHADEQ---GTREYNLALGARR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           A +A + L+  GV+ +R+  +S +   R           S NRR   ++   
Sbjct: 114 ANAAREFLISRGVAGNRLQTVS-YGKERPIEICSTEECYSKNRRAVTVLTGS 164


>gi|75677209|ref|YP_319630.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74422079|gb|ABA06278.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 213

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD  S+   P T   L  +G+ L        VI + GHTD    +     N  LS  RA 
Sbjct: 101 FDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTD---GKGSDAYNQNLSERRAE 157

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L++   +    +    G+     K  +DP  + NRR++++
Sbjct: 158 AVKRFLVETYKIPAANLVAA-GYGKEGYKNPADPFAAENRRVEVV 201


>gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 353

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVKGNK 353


>gi|149375118|ref|ZP_01892890.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
 gi|149360482|gb|EDM48934.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
          Length = 192

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  ++    E   VL      L  +      I GH D          N  L   RA + 
Sbjct: 91  FDFDTAEIKAEAREVLVAHARFLQANPGQNVRIEGHADER---GTKEYNLALGERRANAI 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            + L+ +G S  +   IS +   +  +  +S+   + NRR++++
Sbjct: 148 ERFLIVNGASRGQTETIS-YGEEKPAVMGSSESAWAQNRRVELV 190


>gi|89889605|ref|ZP_01201116.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
 gi|89517878|gb|EAS20534.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
          Length = 573

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           Q N   FD   +         L +I  ++  ++ +  +   +TD          N  LS 
Sbjct: 460 QINRIYFDNDKAAITTSAAKELDRIVAMMMKNSSMEILAETYTDTR---GSDSYNKTLSQ 516

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDR 341
            RA +    L+  G++ +R+  + G       +       +D     +RR +  +  +
Sbjct: 517 KRADAVRGYLISKGIAANRVKAV-GRGEDNPVVDCESKTCTDEEYEQSRRTEFTITKK 573


>gi|92114381|ref|YP_574309.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
 gi|91797471|gb|ABE59610.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
          Length = 830

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIP---LPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286
            +  +F                 L K+ E L        I I GH D          N +
Sbjct: 710 ESDTLFAFGRGDYAGLQQAGQQELDKLAERLLNTQDLGQILITGHADPI---GNEAANQQ 766

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDIL 337
           LSL RA +  Q L+  GV    + +  G    R  +    D   +        NRR++I 
Sbjct: 767 LSLQRAMTVRQYLIGKGVPAG-LIEAKGAGSERPLVTCDDDQPRAQLIECLAPNRRVEIE 825

Query: 338 VEDRQ 342
           V  +Q
Sbjct: 826 VRKQQ 830


>gi|89094682|ref|ZP_01167618.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
           MED92]
 gi|89081028|gb|EAR60264.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
           MED92]
          Length = 285

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 8/113 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           R   +F  +       +   L  I   +    S + I I GH+D+         N  +S 
Sbjct: 176 RTAVLFPSAQWRLSDASRERLDLIALYVKNDDSVKGIYIDGHSDSQ---GRRLMNRDMSK 232

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            RA      L+  G+  + +            + ++       NRR+ I +E 
Sbjct: 233 RRAEEVTAYLISIGLDPN-MITTRYHGERYPVVPNNSKKNRDRNRRVTIRLEK 284


>gi|298346001|ref|YP_003718688.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
 gi|304390241|ref|ZP_07372195.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315657506|ref|ZP_07910388.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298236062|gb|ADI67194.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
 gi|304326723|gb|EFL93967.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315491978|gb|EFU81587.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 307

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 73/201 (36%), Gaps = 7/201 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
              N L  D   G     ++ ++           P    E+I AM+    L  + K++  
Sbjct: 62  QIANPLQTDGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEE 121

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L     +     +    T  G+++ ++       F    +   P    VL+ I   L  
Sbjct: 122 QLKDAGKEG---SLAMRITDKGLVLGMVANDTY--FKTGDATIQPTAREVLKAISPTLMS 176

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             E I+I G+ D  P  +     N+ L+  RA      L   GV   ++  IS  A H+ 
Sbjct: 177 IEEGIAIEGYADPQPISSAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQT 236

Query: 321 KI-ASDPMNSANRRIDILVED 340
           +        + NRR+DI++  
Sbjct: 237 EATPGQDAWAFNRRVDIVIMS 257



 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 50/167 (29%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+      P+N   W + Y D +TV+M  FLV++ I+  D      +         + + 
Sbjct: 3   KRKHECPEPDNTERWAVSYLDMITVMMCLFLVLYAISQVDQGKLSKLRTSLAAGFNSTIQ 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +  +  +      +               N          Q  +     N+I      Q
Sbjct: 63  IANPLQTDGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQ 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             +  K          K L        +  K  +  + P ++E + A
Sbjct: 123 LKDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKA 169


>gi|262402315|ref|ZP_06078876.1| outer membrane protein [Vibrio sp. RC586]
 gi|262351097|gb|EEZ00230.1| outer membrane protein [Vibrio sp. RC586]
          Length = 212

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +T      N   NY              +   LQD           L  D      +   
Sbjct: 16  TTSALAQQNDYANYEGDEYDYRPTPLANQIADLQDDDNDGVINARDLCPDTPRGSEIDND 75

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278
                + S   Q+   +F   SS   P  +  ++++ E L       I ++G+       
Sbjct: 76  GCGTFVKSSQMQQLHILFANDSSAIEPAFLTQIRQMAEFLKTYPSTSIELQGYASKV--- 132

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
             A  N  LS  R+ +    L++ G++ +R++ I G+    L+     D  ++ NRR+  
Sbjct: 133 GGAEHNLALSKQRSEAVRDQLLRYGITPNRVN-IVGYGDSVLEADGTDDVSHARNRRVTA 191

Query: 337 LVEDRQG 343
            V   +G
Sbjct: 192 TVVGYKG 198


>gi|226330649|ref|ZP_03806167.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
 gi|225201444|gb|EEG83798.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
          Length = 167

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + S    E    L  +   LA+       + + G+TD          N  LS
Sbjct: 39  RSDVLFNFNKSTLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 95

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA S    L+  G+  + IS   G         +  D + +          +RR++I 
Sbjct: 96  EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNVKARSALIDCLAPDRRVEIE 154

Query: 338 VED 340
           ++ 
Sbjct: 155 IQG 157


>gi|209168561|gb|ACI42276.1| putative outer membrane protein [Vibrio alginolyticus]
          Length = 213

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283
           + S  + +   +F   S +  P     ++++ + L       I I+G+   +     A  
Sbjct: 81  VDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 137

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340
           N  LS  RA +  + LM +G+S DR+  I G+               ++ NRR+   V  
Sbjct: 138 NLDLSKRRAENVRKELMTNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 195

Query: 341 RQG 343
            +G
Sbjct: 196 HKG 198


>gi|37525710|ref|NP_929054.1| outer membrane protein A [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36785139|emb|CAE14068.1| Outer membrane protein A precursor (Outer membrane protein II*)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 368

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ +SS    E    L ++   LA+   +   + + G+TD          N +LS
Sbjct: 237 RSDVLFEFASSELKAEGKHNLDQLYTELANIDPNQGKVLVLGYTDRI---GKDVYNQKLS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+    IS   G             +           + +RR++I 
Sbjct: 294 QKRAQSVVDYLVSKGIPSGSISA-EGHGKANPV-TGSTCDKVHKPNLINCLAPDRRVEIE 351

Query: 338 VEDRQ 342
           ++  +
Sbjct: 352 IQGTK 356


>gi|332288389|ref|YP_004419241.1| outer membrane protein A [Gallibacterium anatis UMN179]
 gi|330431285|gb|AEC16344.1| outer membrane protein A [Gallibacterium anatis UMN179]
          Length = 247

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 11/111 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  +FD  S+   PE+  V++ +   L+ +   I I G+TD          N  LS  RA
Sbjct: 138 SDFLFDFDSANLKPESQKVIEDLVNKLSKNK-QIWITGYTDRL---GSESYNLALSQRRA 193

Query: 293 YSAYQVLMKSGVSEDRISKI-SGFAHHRLKIASDPMNSA------NRRIDI 336
            +    ++  G+   RI  I  G A        +  ++       NRR+ I
Sbjct: 194 VAVKNAMVALGIPASRIKAIGMGKADQVKACEKETGSALRQCLAPNRRVVI 244


>gi|317402473|gb|EFV83041.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
           C54]
          Length = 166

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           SI+ Q+ +  FD  S     +   +++     LA   +    I G+TD       A  N 
Sbjct: 54  SILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKIKIEGNTDER---GGAEYNL 110

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            L   RA +  +++   GVS+++I  IS F   + K         + NRR DI+
Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKATGSSEADFAENRRADIV 163


>gi|319426005|gb|ADV54079.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 289

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             +     +   L ++ E LA+   V  + +  +TD+         N R+S +RA S  +
Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
             + SG+ +DRI  + G    R   +++     + NRR+ I +   
Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288


>gi|120599225|ref|YP_963799.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|120559318|gb|ABM25245.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
          Length = 289

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             +     +   L ++ E LA+   V  + +  +TD+         N R+S +RA S  +
Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
             + SG+ +DRI  + G    R   +++     + NRR+ I +   
Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288


>gi|167619124|ref|ZP_02387755.1| OmpA family protein [Burkholderia thailandensis Bt4]
 gi|257138357|ref|ZP_05586619.1| OmpA family protein [Burkholderia thailandensis E264]
          Length = 209

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 86  LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199


>gi|163800131|ref|ZP_02194032.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
           AND4]
 gi|159175574|gb|EDP60368.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
           AND4]
          Length = 356

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F            + L  +   ++       I + GHTD          N  +S  RA  
Sbjct: 218 FQFGQKKLNASQQITLAALYSYISVDERVTKILVDGHTDNV---GSQLTNLTVSRQRAEQ 274

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             Q L++ G+    + ++          ++      + NRR+ + +    
Sbjct: 275 VAQALIQKGMDRS-LIEVRAHGSRYPIASNKTQLGQAKNRRVTLRLVRDN 323


>gi|83312308|ref|YP_422572.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82947149|dbj|BAE52013.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 162

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD +SS    + +  L +    L        ++ GH D          N  L   R
Sbjct: 57  DRVFFDTNSSALRSDALATLTRQAVWLRAYPNYQLTVEGHADER---GTREYNLGLGDRR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
           A++  + L+  GV++ R+  IS +   R     ++D   + +RR   ++E
Sbjct: 114 AHAVKRFLIAQGVAQARLKIIS-WGKERPVAFGSNDLAWAQSRRAVTVLE 162


>gi|28898406|ref|NP_798011.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28806623|dbj|BAC59895.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 214

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S    P     ++++ + L       I ++G+   +     +  N  LS  RA
Sbjct: 91  RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 147

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
            +  + L+++G++ DR+  I G+        +       + NRR+   V   +G
Sbjct: 148 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 199


>gi|170724840|ref|YP_001758866.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810187|gb|ACA84771.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 201

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           Q    +F   S    P     ++ I   +        +I GH   +        N  LS 
Sbjct: 73  QELKILFPNDSYYIDPMYYDQVEIIATFMRQFPNTKVTIEGHCSKT---GSYEHNLALSQ 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +    L +  G+  DR++ I G++  R    S+   +   NRR+
Sbjct: 130 NRANAVTTALSERFGIEPDRLTAI-GYSFDRPIDLSETAMAHTRNRRV 176


>gi|71065432|ref|YP_264159.1| OmpA/MotB [Psychrobacter arcticus 273-4]
 gi|71038417|gb|AAZ18725.1| probable OmpA/MotB [Psychrobacter arcticus 273-4]
          Length = 211

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 26/185 (14%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 +  ++++   ++   Q +A  +    + +        + F   ++   I++ D 
Sbjct: 32  QNTYAEIKHKQVMENSQQSDRQKIATLLEDIQTSVATQGAGNLIDFNMEQS--KITLKDN 89

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNI------ 280
                F + S+   PE       I + +       S   I + GHTD  P          
Sbjct: 90  V----FARGSACITPEAKTAFNNIEDKITSFLQQSSNAKIFVEGHTDNIPVSQPVTDYRR 145

Query: 281 ----ARDNWRLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPMNSANRR 333
                 DN+ LS  RA  A ++L+   +      RI  ++G+   +      P + ANRR
Sbjct: 146 FCTVYDDNYTLSAARAREARKLLVGQ-LDTSIAKRIV-VAGYGDSQPIKGISPEDDANRR 203

Query: 334 IDILV 338
           +++ +
Sbjct: 204 VEVRL 208


>gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida]
          Length = 354

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 211 VTAGLSYRFGQSVFVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 270

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 271 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 326

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 327 CDSVKGRKALIACLADDRRVEIAVKGNK 354


>gi|315605392|ref|ZP_07880435.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312961|gb|EFU61035.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 184

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 8/113 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +I        F+  S         +L     E        +S+ GHTD+         N 
Sbjct: 73  TITTLSGDVNFEVDSDQLTARAREILDSLASEWSKTKPSKVSVTGHTDSV---ADDAHNL 129

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            LS  RA +    L    V    I+   G         ++     + NRR++I
Sbjct: 130 DLSKRRAKAVGDYLASK-VPGLSITT-DGKGEAEPIADNETDEGRAQNRRVEI 180


>gi|322417797|ref|YP_004197020.1| hypothetical protein GM18_0255 [Geobacter sp. M18]
 gi|320124184|gb|ADW11744.1| conserved repeat domain protein [Geobacter sp. M18]
          Length = 2257

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RN 279
            +S+      P F    +    E    L ++ E+L       I + GHTD        RN
Sbjct: 817 QVSLPPVVLHPHFPTFGAELSGEDRKELDRLAELLRRFDINHIEVTGHTDLVRIAPRSRN 876

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           I  +N  LS  RA S  + L  +  +  + +  ++G        ++  +   + NRR+++
Sbjct: 877 IYANNTALSFARARSVGRYLTAALHLPPESLD-LTGRGEREPVASNGMEAGRAQNRRVEV 935

Query: 337 LVEDRQ 342
            V   Q
Sbjct: 936 KVSLSQ 941


>gi|256828401|ref|YP_003157129.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577577|gb|ACU88713.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 179

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F   S+    E+  VL    E+L  +    + I GH D          N  L   R
Sbjct: 72  DKIYFAFDSNELTQESRQVLTDKAELLKANPALSLLIEGHCDER---GTNEYNLALGERR 128

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           A +AY+ L+  G+   ++  IS +      +  +++     NRR + 
Sbjct: 129 ARAAYEFLVLLGIDSSKLQIIS-YGEEYPAVQGSNEDAWGKNRRDEF 174


>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
 gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
          Length = 368

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + S    E    L  +   LA+       + + G+TD          N  LS
Sbjct: 240 RSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 296

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  + IS   G             +    +A       +RR++I 
Sbjct: 297 EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNVKARAALIDCLAPDRRVEIE 355

Query: 338 VED 340
           ++ 
Sbjct: 356 IQG 358


>gi|152980803|ref|YP_001354158.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
           Marseille]
 gi|151280880|gb|ABR89290.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
           Marseille]
          Length = 169

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S I  PE   V++   + L  +     I +G+TD       A  N  L   RA + 
Sbjct: 69  FDFDSYIVKPEFQQVVENHAKYLKSNQGRKIIIQGNTDDR---GGAEYNLALGQKRAEAV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            + L   GV E ++  +S     + K   + +   + NRR DI+
Sbjct: 126 RKSLSLLGVPETQMEAVS-LGKEKPKALGSDEAAWAENRRADIV 168


>gi|78484704|ref|YP_390629.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78362990|gb|ABB40955.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
          Length = 241

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 28/164 (17%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPETIVVLQKIGEVL 259
            L       +    +  T   GI I++ ++  +   +F    +   P  +  + +    L
Sbjct: 68  ALETQQRLGMNWLHIENTLSKGIKITMQEEVFSSQDLFASGRAKINPRYLPYINRFVGFL 127

Query: 260 AH-----------------------STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYS 294
                                        + I GHTDA+P       + N+ LS  RAY+
Sbjct: 128 NQLKLETFQQRHPLQVKSITRPGESFQVTVRIEGHTDATPLAKTALYQSNFELSTFRAYA 187

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
              VL       + +  I+G+        + P +S NRR++I +
Sbjct: 188 IMNVLQIYSGLPESLFSIAGYGSFHPVTRN-PYDSKNRRVEIYL 230


>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
 gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
          Length = 362

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + S    E    L  +   LA+       + + G+TD          N  LS
Sbjct: 234 RSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 290

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337
             RA S    L+  G+  + IS   G         +        +A       +RR++I 
Sbjct: 291 EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNIKARAALIDCLAPDRRVEIE 349

Query: 338 VED 340
           ++ 
Sbjct: 350 IQG 352


>gi|159043661|ref|YP_001532455.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
           12]
 gi|157911421|gb|ABV92854.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
           12]
          Length = 175

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E   V+ +    L  +    ++  GH D          N  L   R
Sbjct: 65  DRVLFAVDQSTLSGEAQQVVSQQARWLMDNGAYTAVIEGHADEQ---GTQEYNLALGARR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
           A +    ++  GV+++R+S ++ F   R           + NRR   ++    G
Sbjct: 122 ASAVRDFMVSQGVADNRLSTVT-FGKERPIEVCSEERCYAQNRRAVTVLSAAPG 174


>gi|108763487|ref|YP_633317.1| OmpA family protein [Myxococcus xanthus DK 1622]
 gi|108467367|gb|ABF92552.1| OmpA family protein [Myxococcus xanthus DK 1622]
          Length = 171

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   ++         L+K+   L             +    + GHTD++     
Sbjct: 53  RQNQCSFKTGTAQLDAGCEAKLKKLTNALVDAKKQLVAAGVKSYKFEVSGHTDST---GD 109

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A  N +LS  RA +  + L+  G+    I  + G+   +  +   D     + NRR ++ 
Sbjct: 110 AAKNKKLSEQRAETIVKELIARGIPRGEIIAV-GYGSEKPLVKPDDTAAKKAKNRRYELQ 168

Query: 338 VE 339
           V 
Sbjct: 169 VR 170


>gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing
           protein [Dickeya dadantii Ech586]
 gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein
           [Dickeya dadantii Ech586]
          Length = 354

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N  LS
Sbjct: 226 KSDVLFNFNKATLKPEGQRSLDQLYTQLSTLDPKDGSVVVLGFTDRL---GSDQYNQTLS 282

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA +    L+  G+  ++IS   G            A+    +A       +RR++I 
Sbjct: 283 AKRAQTVVDYLVHKGIPSNKISA-RGMGKANPVTGSTCANVKARAALIECLSPDRRVEIE 341

Query: 338 VED 340
           V+ 
Sbjct: 342 VKG 344


>gi|119356692|ref|YP_911336.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354041|gb|ABL64912.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 162

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               +D  SS+   E    L +    +  + +  I I+GH D       +  N  L   R
Sbjct: 57  GDVFYDFDSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDR---GTSEYNLALGDRR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           A SA + L+++G++  RI  I+ F   R    S      + NRR   +++
Sbjct: 114 AVSAREFLIRTGIASSRIETIT-FGEERPFSTSQSEEGLAKNRRAHFVIK 162


>gi|260219497|emb|CBA26342.1| Peptidoglycan-associated lipoprotein [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 167

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286
           +     T  FD  S +   E    L+   + L    +  +SI GHTD          N  
Sbjct: 57  LSAALKTVYFDYDSFVIRSEFQATLEAHAKYLKADKSRKVSIEGHTDER---GGREYNLA 113

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           L   RA +  + L   GVS+ ++  IS +   +  +  +   +   NRR + 
Sbjct: 114 LGQKRAEAVRKALQLQGVSDAQMEAIS-YGKEKPAVLGNSEAALEKNRRAEF 164


>gi|90022072|ref|YP_527899.1| putative outer membrane protein [Saccharophagus degradans 2-40]
 gi|89951672|gb|ABD81687.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 322

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 231 QRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287
           +R    F+   + +  P     L KI  ++ H  +  +  I GHTD+        +N  L
Sbjct: 179 KRTALYFEPGETDVLSPGLQRQLDKILALVKHDNKLRMFYIDGHTDS---NGDRAENLEL 235

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           S  RA      L + G+ ED I  I          ++      + NRR+ + +E 
Sbjct: 236 SKTRAELVSTYLKRRGIPEDWIV-IRWHGERYPVASNATVNGRARNRRVTVRLER 289


>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
 gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
 gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
 gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
          Length = 348

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++           F    +   P    VL  I   +A      
Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348


>gi|330994155|ref|ZP_08318083.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
 gi|329758622|gb|EGG75138.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
          Length = 411

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD---ASPFRNIARDNWRLSLD 290
             FD   S        ++    +      T  I + G+TD   A P       N  LSL 
Sbjct: 302 VFFDWDRSDLTDRARAIVAVAAQASTNTQTTRIEVNGYTDNSAARPGPQGEHYNQALSLK 361

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA      L++ GV    I  I G+      + +  +   + NRR++I++
Sbjct: 362 RAQVIKAELVRDGVPGPAID-IHGYGDANPLVQTGANTREAQNRRVEIIL 410


>gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565]
 gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565]
          Length = 333

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE +  L  + + +           + G+TD          N +LS 
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334
            RA +    L+  G+   ++  I G                N               RR+
Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 321

Query: 335 DILVEDRQ 342
           ++ V   Q
Sbjct: 322 EVRVTGVQ 329


>gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 333

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE +  L  + + +           + G+TD          N +LS 
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334
            RA +    L+  G+   ++  I G                N               RR+
Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNGIKAKAQLISCLAPDRRV 321

Query: 335 DILVEDRQ 342
           ++ V   Q
Sbjct: 322 EVRVTGVQ 329


>gi|270159822|ref|ZP_06188478.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
           D-4968]
 gi|289165420|ref|YP_003455558.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella longbeachae NSW150]
 gi|269988161|gb|EEZ94416.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
           D-4968]
 gi|288858593|emb|CBJ12474.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella longbeachae NSW150]
          Length = 175

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F    S   P+ +  +    E L       + + GHTD          N  L   RA +
Sbjct: 70  LFSYDDSNLAPKYLPSVNAQAEYLKTHPGARVLLAGHTDER---GSREYNVALGERRANT 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
              +L  +GV+  +I ++  +   R       D  ++ NRR++   E  +
Sbjct: 127 VADILRMAGVNRQQI-RVVSYGKERPINLGHDDASHAQNRRVEFTYEATR 175


>gi|255527288|ref|ZP_05394168.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255509026|gb|EET85386.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 107

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 32/90 (35%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +   N   W + Y+DFMT+LM  F+V++ ++  D      + Q  +         
Sbjct: 2   KKKKQEEHENSERWLLSYSDFMTLLMILFVVLYAMSNVDKAKFSQLSQSMSIAMGGGKIM 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
                         S N  D   +E   ++
Sbjct: 62  QGNENSPNISNSSPSGNSSDGKTEESKMED 91


>gi|159043677|ref|YP_001532471.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
 gi|157911437|gb|ABV92870.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
          Length = 212

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + S    E    L    + +    E   S+ GHTD       A  N RL   RA + 
Sbjct: 69  FAFNQSTLTSEARAALDVQADFIKQFPELRFSVFGHTD---LVGSAAYNRRLGQARATTV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  GV  +++  +      +  + +      NRR
Sbjct: 126 VNYLVSRGVQPEQLQALVSLGETQPLVVTQDREMRNRR 163


>gi|325473749|gb|EGC76938.1| OmpA family protein [Treponema denticola F0402]
          Length = 440

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   ++ L      L +I ++L  S  E   + GHT          +   LS +RA + 
Sbjct: 338 FEPDKAVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADV---GKPEEEKILSQERAKTV 394

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            + L+K G+  ++     G    +    +      + NRR++I +
Sbjct: 395 IEKLVKRGIPAEKFI-YQGAGGTKPIAPNGTEEGRAQNRRVEITI 438


>gi|126727642|ref|ZP_01743474.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
 gi|126703058|gb|EBA02159.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
          Length = 199

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F         +   +L       + S     I GHTD+         N RLS +RA + 
Sbjct: 101 LFATDRYRITSKGRALLADFFN--SSSAAAYVIVGHTDSR---ASDEYNMRLSQNRANAV 155

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             V    G    R+  I  +     +  +        NRR++I+
Sbjct: 156 ANVASSLG---ARVVDIRHYGERMPRATNRTAAGRQANRRVEIM 196


>gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 368

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   PE    L  I   +A      +S+ G+ D          N +LS  RA + 
Sbjct: 255 FAFGKATLKPEASASLDNIYGEIAQVQSPAVSVAGYADRI---GKEAANLKLSQRRAETV 311

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342
              L+  GV+++ I+  +G+        +               + +RR+++ V+  +
Sbjct: 312 ANYLVSKGVAQNAITA-TGYGEANPVTGNTCDAVKGRKALIACLAPDRRVEVSVQGTK 368


>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 361

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +    E    L ++   L+        + + G TD        + N  LS
Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 289

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA S    L+  G+  +++S   G    +        +    +A       +RR++I 
Sbjct: 290 EKRAQSVVDYLVAKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348

Query: 338 VED 340
           V+ 
Sbjct: 349 VKG 351


>gi|113460409|ref|YP_718471.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
           protein P6) [Haemophilus somnus 129PT]
 gi|112822452|gb|ABI24541.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
           protein P6) [Haemophilus somnus 129PT]
          Length = 135

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 7/134 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++   + +       +      +  +  + NT  F+  S     E   +L      L  +
Sbjct: 1   MAACSSSDNASKTNAQMFGGYSVTDLQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLKST 60

Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL- 320
               + + GH D          N  L L RA +    L+  GV   ++S +S +   +  
Sbjct: 61  PASKVLVEGHADER---GTPEYNMALGLRRADAVKNFLLNKGVQASQLSTLS-YGEEKPA 116

Query: 321 -KIASDPMNSANRR 333
               ++   S NRR
Sbjct: 117 ELGHNEAAYSKNRR 130


>gi|146292701|ref|YP_001183125.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|145564391|gb|ABP75326.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 289

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             +     +   L ++ E LA+   V  + +  +TD+         N R+S +RA S  +
Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
             + SG+ +DRI  + G    R   +++     + NRR+ I +   
Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288


>gi|94496180|ref|ZP_01302758.1| OmpA/MotB [Sphingomonas sp. SKA58]
 gi|94424359|gb|EAT09382.1| OmpA/MotB [Sphingomonas sp. SKA58]
          Length = 172

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F         E    LQ     L  +    ++I GH D          N  L   R
Sbjct: 65  DRIFFGLDQYDVDAEDQATLQSQAAWLQQNPSVRVTIEGHADER---GTRDYNIALGERR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339
           A +A   L   G+   RI+ +S +   R     + +   + NRR + + ++
Sbjct: 122 ANAAKNYLASLGIDPGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTIQ 171


>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
 gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
 gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
 gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
          Length = 360

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +         L      + +    T  I + G+TD          N  LS 
Sbjct: 237 SDVLFDFGKANLKSAAKQSLDAAHAEIQNLGLATPAIQVNGYTDRI---GKDAPNLALSQ 293

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA S    ++  GV+ + I+ + G+        +               + +RR+++ V
Sbjct: 294 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 352

Query: 339 EDRQ 342
           +  +
Sbjct: 353 QGSK 356


>gi|85373329|ref|YP_457391.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
 gi|84786412|gb|ABC62594.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
          Length = 167

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 8/117 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
             +  +    FD             LQ+  + L+       +I GH D          N 
Sbjct: 55  QQMGGKEIIYFDTDRFNIDDIDAAALQQQAQWLSQYPGKRATIEGHADER---GTREYNL 111

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339
            L   RA +A   L   G+   R+  +  +   R     +     S NRR + + ++
Sbjct: 112 ALGERRANAAKNYLASLGIDTSRL-SVISYGEERPVALGSDQAAWSQNRRAVTVTID 167


>gi|332296685|ref|YP_004438607.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
 gi|332179788|gb|AEE15476.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
          Length = 475

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274
             E T+ G+ +S+ D R    F   S+  L E    L  I ++L    + +  + GHT +
Sbjct: 356 EIEDTQQGLRLSVRDIR----FRPDSAEILSEESWRLDAIADMLRSEPDAVYLVEGHTAS 411

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
                      +LS++RA +    L+  G  +++    +G+   R    +      + NR
Sbjct: 412 V---GKPEGEKKLSVERAQAVVAALVSRGFRKEQFL-FTGYGGTRSVADNGTAAGRAENR 467

Query: 333 RIDILVED 340
           R++I +  
Sbjct: 468 RVEITILR 475


>gi|241662342|ref|YP_002980702.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
 gi|240864369|gb|ACS62030.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
          Length = 173

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    PE   +L +    L    +    I+G+TD       +  N  L   RA + 
Sbjct: 73  FDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 130 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 172


>gi|157962384|ref|YP_001502418.1| peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
           700345]
 gi|157847384|gb|ABV87883.1| Peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
           700345]
          Length = 179

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 7/156 (4%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             +        +   S   +  V    V  VL    +  +    + + +   FD   S  
Sbjct: 27  ESETDATSSTESSSSSEYANNGVETGGVAPVLTPQEQQRLKYQELRKEHIIYFDFDRSSV 86

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   +L   G+ L       + I GH D          N  L   RA +  + L   G
Sbjct: 87  SQQFAEILDAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 143

Query: 304 VSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           V   ++S +S +   +      SD   + NRR  ++
Sbjct: 144 VQPSQMSIVS-YGEEKPLDFSRSDDGFAKNRRAVLV 178


>gi|121601320|ref|YP_993883.1| OmpA family protein [Burkholderia mallei SAVP1]
 gi|167720677|ref|ZP_02403913.1| ompA family protein [Burkholderia pseudomallei DM98]
 gi|167739663|ref|ZP_02412437.1| ompA family protein [Burkholderia pseudomallei 14]
 gi|167816870|ref|ZP_02448550.1| ompA family protein [Burkholderia pseudomallei 91]
 gi|167846773|ref|ZP_02472281.1| ompA family protein [Burkholderia pseudomallei B7210]
 gi|167895360|ref|ZP_02482762.1| ompA family protein [Burkholderia pseudomallei 7894]
 gi|167903747|ref|ZP_02490952.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
 gi|254192034|ref|ZP_04898534.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|121230130|gb|ABM52648.1| OmpA family protein [Burkholderia mallei SAVP1]
 gi|157987856|gb|EDO95621.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 209

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 86  LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199


>gi|146306467|ref|YP_001186932.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145574668|gb|ABP84200.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 217

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               K+++         Q     +      L          FE     ++++        
Sbjct: 19  AGSEKKEVAKAAVMPPPQVTRAWLDEYEPKLREAVKGSHFEFERRENLLVVT---APVQG 75

Query: 236 MFDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAY 293
            F+     + LP ++  + ++ ++L    ++  +  GH D+      A  N  LS  RA 
Sbjct: 76  SFNPDRPHMLLPVSLGPITRVAKLLESDEDMAVVVLGHADS---SGDATRNRELSDQRAR 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +   +   SG+ ++R+ ++ G      + A+D       NRR++IL+  R
Sbjct: 133 AVTSIFRLSGLKQNRL-QVMGLGSDMPRAANDSAAGRALNRRVEILLTSR 181


>gi|159042678|ref|YP_001531472.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
 gi|157910438|gb|ABV91871.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
          Length = 310

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++         L  +   L  + + VI++ GHTDA         N  LS+ RA + 
Sbjct: 206 FATGNATLENGQYPSLTALAGFLTENPDLVIALVGHTDAE---GSIDANLALSMRRAEAV 262

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              L+   GV+ +R+ +  G  +   +  +        NRR++ ++   
Sbjct: 263 RDRLVADYGVASERL-RAEGVGYLAPRATNRTEEGRRANRRVEAVLTQP 310


>gi|305664380|ref|YP_003860667.1| OmpA family protein [Maribacter sp. HTCC2170]
 gi|88708397|gb|EAR00633.1| OmpA family protein [Maribacter sp. HTCC2170]
          Length = 646

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q +T  FD        ++ + +QK+   +       I +  HTD+         N  LS 
Sbjct: 533 QLSTIYFDFDKYNIRSDSEIEIQKVIAAMEKYPSLKIKVNSHTDSR---GRDAYNLWLSQ 589

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILVED 340
            RA S    ++  G+ E R+    GF   +L              +  NRR + ++ +
Sbjct: 590 KRAESTVNYMISKGILESRLL-GEGFGETKLINKCANGVRCFGIEHEKNRRSEFIILE 646


>gi|238020123|ref|ZP_04600549.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
 gi|237863647|gb|EEP64937.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
          Length = 366

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   +    L            + I + G+ D        + N  LS  R    
Sbjct: 264 FDSDQDVARADQYPNLTAAVNAANQYSQDQIKLLGNADTDATP---QYNVGLSERRVQYV 320

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+ +GVS DR   I+     +    +      + NRR+D+ +  
Sbjct: 321 AQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYIHR 366


>gi|332882695|ref|ZP_08450307.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679495|gb|EGJ52480.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 344

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        +  V L KI   L     V   I+ HTD+         N  LS  +A   
Sbjct: 238 FDYGRINIRYDASVQLAKIVTFLEEHPNVRLDIKVHTDSR---GDDDYNMSLSNTQAKVI 294

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVE 339
            Q L+  G+S +R++   G+   +           ++  + AN+R++ +V+
Sbjct: 295 EQWLIDKGISRNRLTA-KGYGETQPVNGCENGVPCTEEQHQANKRVEFIVK 344


>gi|255020134|ref|ZP_05292204.1| peptidoglycan-associated outer membrane lipoprotein
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970427|gb|EET27919.1| peptidoglycan-associated outer membrane lipoprotein
           [Acidithiobacillus caldus ATCC 51756]
          Length = 193

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S         +  +  + + +     + + G+TD          N  L   RA + 
Sbjct: 86  FGFNSDSLDARAQEIASQNAQFMMNHAHVKVRLEGNTDDR---GTQEYNLALGERRAEAV 142

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDIL 337
            + L   GVS  RIS +S F         +D    + NRR+D +
Sbjct: 143 KRYLEAQGVSAARISTVS-FGKDNPLCNQNDESCWAKNRRVDFV 185


>gi|269968783|ref|ZP_06182772.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
 gi|269826595|gb|EEZ80940.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
          Length = 213

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283
           + S  + +   +F   S +  P     ++++ + L       I I+G+   +     A  
Sbjct: 81  VDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 137

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340
           N  LS  RA +  + LM +G+S DR+  I G+               ++ NRR+   V  
Sbjct: 138 NLDLSKRRAENVRKELMTNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 195

Query: 341 RQG 343
            +G
Sbjct: 196 HKG 198


>gi|156319761|ref|XP_001618159.1| hypothetical protein NEMVEDRAFT_v1g225448 [Nematostella vectensis]
 gi|156197754|gb|EDO26059.1| predicted protein [Nematostella vectensis]
          Length = 294

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S    +  + L KI EV+  +  +   +R HTD+      A  N  LS  RA + 
Sbjct: 186 FDLNKSNIRKDAALELAKIVEVMKENPSIKVDVRSHTDSRQ---SAEYNEELSDKRAKAT 242

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
              ++K G+S DR++   G+   +L          S+  + ANRR + +V
Sbjct: 243 VAWMVKKGISADRLTA-KGYGESQLVNKCSDGVECSEEEHQANRRSEFIV 291


>gi|255020103|ref|ZP_05292174.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
 gi|254970465|gb|EET27956.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
          Length = 183

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS  L   I VL ++ E      + VI++ G+            N +LS  RA S 
Sbjct: 73  FKFNSSKLLDRDIKVLDEVAEFAQKHPDAVINVNGYASKV---GTYAYNLKLSQQRAESV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            + L + GV  DR+  + G ++     ++        N+R++I
Sbjct: 130 ARYLEQHGVPRDRMV-LKGHSYEDPIASNATPQGRFENQRVEI 171


>gi|146306425|ref|YP_001186890.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145574626|gb|ABP84158.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
          Length = 315

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I + +          I GH D          N  LS  RA +
Sbjct: 183 FPGGGIELDAMAKAKLDIILDFVKADPSINSFQIDGHADN---SGNRLTNRDLSRRRALA 239

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L+  GV  ++I  +         + ++     + NRR  + ++ 
Sbjct: 240 VQEYLVAGGVPAEQI-TVRFHGERYPLVPNNNEANRAKNRRATLRLDR 286


>gi|117923780|ref|YP_864397.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117607536|gb|ABK42991.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
          Length = 203

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 7/188 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
            G              ++        + E     + +   +++        S   + +  
Sbjct: 18  TGCGGVPKDKPGDLRQEQMQDQYKGTTDEGQALTRPEGMAEEIGGGAGMDGSQYKSGSYY 77

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL-QKIGEVLAHSTEVISIRGH 271
                  +  G    +    N   F   S     E   VL Q    ++    + +SI GH
Sbjct: 78  DEQSAAGSAGGTQDPMGQPENMIFFGYDSEALTYEAQTVLAQHAVAIIKGGVQSVSIEGH 137

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNS 329
            D          N  L   RA S    L   GV    +  +S +   R      ++   +
Sbjct: 138 CDER---GTREYNLALGQKRADSVKNFLNAQGVPTTVMRTVS-YGKERPLYTGHTETSWA 193

Query: 330 ANRRIDIL 337
            NRR  ++
Sbjct: 194 RNRRAVLV 201


>gi|308050234|ref|YP_003913800.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307632424|gb|ADN76726.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 204

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD  S+   P ++ ++Q +G+ L     + +   I GHTDA         N  LSL RA 
Sbjct: 94  FDSGSARLRPSSLALVQTLGDALTDPRFNGQAFLIAGHTDAD---GDEEYNLGLSLRRAN 150

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +    L++   ++ D++  + GF       ++        NRR+++
Sbjct: 151 TVRDYLLQHTSLTPDQLK-VVGFGETTPLASNHERQGKQQNRRVEV 195


>gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi]
          Length = 364

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       I + G+TD          N  LS 
Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA S    ++  GV+ + I+ + G+        +               + +RR+++ V
Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGSK 360


>gi|83594657|ref|YP_428409.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|9408182|emb|CAB99313.1| porin-assoziated protein (PAP) [Rhodospirillum rubrum]
 gi|83577571|gb|ABC24122.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 273

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 65/219 (29%), Gaps = 10/219 (4%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                  N     +  Q       +         +L  +     +          P    
Sbjct: 59  DDTAYYTNKAKLAAAGQTPAPTAMAERELGSYTGELTAARSALVTALGAGAPSSNPTVAA 118

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K          +    +    +     +  +            ++S   +     F   S
Sbjct: 119 KAQTSFDCWAEEAEEDRQPEHIRECKQNFEIAMNALGGAPAPAVVS---EGFKVFFALDS 175

Query: 242 SIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   PE+   L ++ +  L+ S   + + G+ D       A  N  LS  RA +  + L 
Sbjct: 176 ARLSPESEATLDRVSQAFLSGSPASVMVVGYADT---SGPADYNILLSQRRAEAVARGLA 232

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           + G++ + +  +  +   RL + +        NRR++++
Sbjct: 233 QRGIASE-VLTLEAYGEERLAVPTADGVVEQQNRRVEVV 270


>gi|221200412|ref|ZP_03573454.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
 gi|221206092|ref|ZP_03579106.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221174104|gb|EEE06537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
 gi|221179753|gb|EEE12158.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
          Length = 159

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +  + + + G+TD          +  LS  R
Sbjct: 52  GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDAYDMELSRRR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G   H     +      + NRR  I+V  R
Sbjct: 109 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 159


>gi|319427140|gb|ADV55214.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 197

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L  + +V  I  GHTD          N++LSL RA 
Sbjct: 91  VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTD---IVGTPEFNYQLSLQRAE 147

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  ++L++  G + +R   I G         +        NRR+  +V ++
Sbjct: 148 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 197


>gi|288959500|ref|YP_003449841.1| ompA/MotB domain protein [Azospirillum sp. B510]
 gi|288911808|dbj|BAI73297.1| ompA/MotB domain protein [Azospirillum sp. B510]
          Length = 416

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIAR 282
           ++I I       MF             +++++G+ LA     + +  HTD   P      
Sbjct: 301 LVIRI---PAAAMFATGGDAVKARHRAIVERVGQTLAAEPGGVLVVAHTDDQSPTTGRLP 357

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               L+  RA +  ++L +S +   R+S   G         +D       NRRIDI +
Sbjct: 358 TGQALTDARAEAVRRLLERS-IPPARLSA-EGHGDQEPVALNDTPAGRDANRRIDIRL 413


>gi|260426228|ref|ZP_05780207.1| OmpA family protein [Citreicella sp. SE45]
 gi|260420720|gb|EEX13971.1| OmpA family protein [Citreicella sp. SE45]
          Length = 219

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D  +   F  +SS         L+     +    E    + GHTD       A  N +L 
Sbjct: 68  DVPSMVNFAFNSSQLDAGARETLRVQAGWIRQFPEVRFRVYGHTD---LVGSASYNRQLG 124

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L RA +    L   G+S  R+  +  +   +  I
Sbjct: 125 LARAQAVVAYLASQGISRSRLEAVVSYGETQPLI 158


>gi|126668392|ref|ZP_01739349.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
 gi|126627101|gb|EAZ97741.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
          Length = 189

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD  ++    E+  VL      L+ +  +   + GH D       +  N  L  
Sbjct: 82  DVTVFYFDFDTAEISAESRDVLVAHARYLSANPSMNARLEGHADDR---GTSEYNLALGE 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
            RA +  + L+ +G S  ++  IS +   +  +   SD   S NRR++++  
Sbjct: 139 RRANAVQRFLIVNGASRGQLETIS-YGEEKPAVQGMSDSARSQNRRVELIFR 189


>gi|146293768|ref|YP_001184192.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|145565458|gb|ABP76393.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 196

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L  + +V  I  GHTD          N++LSL RA 
Sbjct: 90  VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTD---IVGTPEFNYQLSLQRAE 146

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  ++L++  G + +R   I G         +        NRR+  +V ++
Sbjct: 147 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196


>gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida]
          Length = 348

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++           F    +   P    VL  I   +A      
Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 265 VAVAGYTDCL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348


>gi|86133957|ref|ZP_01052539.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85820820|gb|EAQ41967.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 370

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 11/112 (9%)

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           D SS+        ++      +      + I  HTD        RDN  LS  RA +   
Sbjct: 263 DFSSATLNEGAKQIIDARLLPIVKDGVAVFIESHTDMR---GTKRDNQELSDRRAKAVTD 319

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
            L+  G++  ++    GF   RL          S+  ++ NRR    V +++
Sbjct: 320 YLISKGINATQLYA-KGFGETRLLNKCADGVVCSESEHAVNRRTTFRVVNQK 370


>gi|121604950|ref|YP_982279.1| OmpA domain-containing protein [Polaromonas naphthalenivorans CJ2]
 gi|120593919|gb|ABM37358.1| OmpA domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 179

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +  PE   V++     L A+    ++I GHTD          N  L   RA 
Sbjct: 76  VYFDFDSYVVKPEFQSVIEAHARYLTANKARKMAIEGHTDEI---GGREYNLALGQKRAE 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           +  + L   GV++ ++  +S F   +  +    +   + NRR +I
Sbjct: 133 AVRRALGLLGVTDSQVEAVS-FGKEKPAVPGLDEASMAKNRRAEI 176


>gi|84394101|ref|ZP_00992836.1| protein F-related protein [Vibrio splendidus 12B01]
 gi|84375292|gb|EAP92204.1| protein F-related protein [Vibrio splendidus 12B01]
          Length = 211

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
                F   S+ P P     L  +G  L+   ++  +  GHTD +      R N  LS  
Sbjct: 102 EQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDVVIEGHTDNT---GSDRVNAPLSEL 158

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           RA      L  + VS  R     GF  +     +        NRR+++++
Sbjct: 159 RAKEVKARLESNYVS-SRAIYTRGFGEYVPACTNASPQGKACNRRVELML 207


>gi|311103960|ref|YP_003976813.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
           A8]
 gi|310758649|gb|ADP14098.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
           A8]
          Length = 166

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           SI+ Q+ +  FD  S     +   +++   + LA   +    I G+TD       A  N 
Sbjct: 54  SILAQQRSVYFDFDSYTVSDQYRSLVETHAKYLASHQQQTIKIEGNTDER---GGAEYNL 110

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            L   RA +  +++   GVS+++I  IS F   + K         + NRR DI+   
Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKSTGTSEADFAENRRADIVYRR 166


>gi|330893498|gb|EGH26159.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 77

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I G+TD++      + N  LS  RA S    L   GV +  +  + G    +   ++   
Sbjct: 1   IVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPDQPIASNADV 56

Query: 327 -MNSANRRIDILVEDRQG 343
              + NRR+++ ++   G
Sbjct: 57  NGRAQNRRVEVNLKPIPG 74


>gi|209808859|ref|YP_002264397.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
 gi|208010421|emb|CAQ80772.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
          Length = 201

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 8/138 (5%)

Query: 210 NIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
              +G   +       +   D+++   +F  +SS   P     ++ + E LA   E  I 
Sbjct: 54  GTPRGAQIDNDGCAEYVEQSDKKDLKILFANNSSEISPIFKSEIRTMAEFLAEYPETSIQ 113

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           ++G          A  N RLS  RA +    L+  GV+ D+I  I GF    L    D  
Sbjct: 114 LQGFASQQ---GNAEYNIRLSELRASAVRVALINYGVNPDKIETI-GFGDTLLTAKGDSA 169

Query: 328 --NSANRRIDILVEDRQG 343
             ++ NRR+   V   +G
Sbjct: 170 VSHALNRRVVATVVGFKG 187


>gi|167624709|ref|YP_001675003.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167354731|gb|ABZ77344.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 321

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD S  +       VL+ +   +A     I I  +TD+         N  LS  RA +  
Sbjct: 224 FDSSKLVATEALAEVLKNV---IASKDTEICITAYTDSL---GAKEYNLTLSKQRAEATR 277

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              + +GV   RI  +           +        NRR+ I +
Sbjct: 278 SYFISNGVEPSRIH-VDWKGEASPVATNRTAEGRALNRRVKIEL 320


>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
          Length = 348

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++           F    +   P    VL  I   +A      
Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGRGEANPVTGNK 320

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348


>gi|254450200|ref|ZP_05063637.1| OmpA domain protein [Octadecabacter antarcticus 238]
 gi|198264606|gb|EDY88876.1| OmpA domain protein [Octadecabacter antarcticus 238]
          Length = 656

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           + GHTD+         N  LS DRA +    L+  GV E+ ++   GF   +    +   
Sbjct: 579 VGGHTDS---SGDELTNNALSQDRANAVRAALIVRGVPENAMTAF-GFGPTQPITDNATP 634

Query: 327 -MNSANRRIDIL 337
              +ANRR DI 
Sbjct: 635 EGRAANRRTDIT 646


>gi|37498966|gb|AAQ86765.2| hemagglutinin antigen [Avibacterium paragallinarum]
 gi|48249488|gb|AAT40990.1| hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 345

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 327 LIACLADDRRVEISVKGNE 345


>gi|110833620|ref|YP_692479.1| peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
 gi|110646731|emb|CAL16207.1| Peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
          Length = 189

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F   S+         L+     L ++    I + GH D          N  LS 
Sbjct: 78  DSRVIYFAFDSNTIPAAAFETLRAHATYLKNNANAKIRLEGHADER---GTREYNVALSE 134

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            R+ +  + L   GV+  ++  +S +   +           + NRR++I
Sbjct: 135 RRSKAVEKFLRVQGVASSQLEIVS-YGEEKPAAFGHSEMDWAKNRRVEI 182


>gi|104780417|ref|YP_606915.1| OmpA/MotB family outer membrane protein [Pseudomonas entomophila
           L48]
 gi|95109404|emb|CAK14104.1| putative outer membrane protein, OmpA/MotB family [Pseudomonas
           entomophila L48]
          Length = 325

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F  +           L  + + L     V  I   GH+D          N   S  RA +
Sbjct: 179 FPGAGIELDAAGRARLDVVLDYLKADPSVNHIELDGHSDN---SGNRLTNRDTSRRRALA 235

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L   GV ED+I  +           ++     + NRR++I ++ 
Sbjct: 236 VAEYLKAHGVPEDQI-TVRFHGERYPLAKNNSAANRARNRRVNIQLDR 282


>gi|315637993|ref|ZP_07893178.1| chemotaxis protein MotB [Campylobacter upsaliensis JV21]
 gi|315481841|gb|EFU72460.1| chemotaxis protein MotB [Campylobacter upsaliensis JV21]
          Length = 314

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 106/326 (32%), Gaps = 47/326 (14%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
            +       W I YAD M  L+  F+ + +I A         +       +NL T    +
Sbjct: 3   KNNKEEGNFW-IAYADLMAGLL--FIFILLIGAI-VVKYVLTQSDLKIIKENLNTQEANL 58

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
              +   +        LS + + T N+++L                         Q    
Sbjct: 59  ELSKQALKDKESIVFQLSKELNATANTLNLI----------------------HTQKTEL 96

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           +N+++  S+  K+     D +  I   +        K      K  K   +    I   L
Sbjct: 97  ENNISTLSKDLKNNIDEKDRQILILLNQIELKENELKAIQQDFKEAKERVENLSLIRENL 156

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK--------- 254
           S  +   + + +  +     I +         +FDK S I   E  + L+K         
Sbjct: 157 SKALQKKLDENISIDQKTGAISL-----PAEVLFDKDSFILKDEAKISLKKILSGYLTGI 211

Query: 255 -IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISK 311
              E ++ + E I I GHTD+         N  LS  RAY     +      E   ++  
Sbjct: 212 LDDENISKNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMSFIYSFYKDERLQKLLM 268

Query: 312 ISGFAHHRLKIASDPMN-SANRRIDI 336
            SG +     + +   +   +RRI+I
Sbjct: 269 ASGRSFSVPILKNGVEDKDLSRRIEI 294


>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
 gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
           [Dickeya zeae Ech1591]
          Length = 355

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L+        + + G TD        + N  LS
Sbjct: 227 KSDVLFNFNKATLKPEGQRSLDQLYSQLSSLDPKDGSVVVLGFTDRL---GSDQYNQTLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337
             RA +    L+  G+  ++IS   G            A+    +A       +RR++I 
Sbjct: 284 TKRAQTVVDYLVHKGIPSNKISA-RGMGKANPVSGSTCANVKARAALIDCLAPDRRVEIE 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|37704606|gb|AAR01575.1| OprF [Pseudomonas sp. MFY33]
          Length = 316

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+    +   ++ + + +        ++ GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESTRVQSV-GYGESRPVA 316


>gi|332707360|ref|ZP_08427410.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
 gi|332353851|gb|EGJ33341.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
          Length = 287

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 10/211 (4%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
                +   +       +   +  +L K               L      + L  + +  
Sbjct: 84  EPTEANPLKQLTPVQRVQLKAQLSELDKRMKRLSEDVTMLETQLGTSGGNESLERRIQAI 143

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
              L +  + + +  +  N     L       + +++       +F++S S   PE  ++
Sbjct: 144 TLLLKEPSTPSSNAPLVGNSNGNRLAALAADKLKVTLPSD---ILFEESKSTLRPEAGLI 200

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L KI   L       I I  HTD       A++N  LS +RA +  Q L  + + +    
Sbjct: 201 LDKIVTDLQAYPSSTIRIAIHTDNPR---EAKENRNLSFERAKAVQQYLSSA-LDDSYRW 256

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVE 339
            I G+   R  +A+D       NRR++I V+
Sbjct: 257 LIIGYGETRPLVANDTEVNQQRNRRVEIAVD 287


>gi|292491797|ref|YP_003527236.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
 gi|291580392|gb|ADE14849.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
          Length = 202

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S   L ET   L ++G +L       E I I GHTDA         N  LS +RA 
Sbjct: 95  FALNSFEILDETRPYLDEVGRLLNMEQFKEERIIIEGHTDAQ---GSENYNNWLSQERAK 151

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           S    L+ S  V  +R+  + G          +P N  NRR+++
Sbjct: 152 SVKNYLVSSFRVDPERLM-VVGRGEREPLPDLNPNNGLNRRVEL 194


>gi|261855180|ref|YP_003262463.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
           c2]
 gi|261835649|gb|ACX95416.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
           c2]
          Length = 127

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
              T  F        P    +LQ+    L  +T+  + + G+TD          N  L  
Sbjct: 19  DAATVYFGFDKYNVDPSYRPMLQQNAAFLKENTQRHVLVEGNTDNR---GSREYNIALGE 75

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            RA +    L+  GV+  ++  +S +   R  +   ++   + NRR D+
Sbjct: 76  KRAVAVRDTLLADGVAPSQVDVVS-YGEERPAVEGNNEAAWAKNRRADL 123


>gi|48249486|gb|AAT40989.1| hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 345

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 327 LIACLADDRRVEISVKGNE 345


>gi|71279065|ref|YP_267707.1| ompA family protein [Colwellia psychrerythraea 34H]
 gi|71144805|gb|AAZ25278.1| ompA family protein [Colwellia psychrerythraea 34H]
          Length = 352

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288
           D      F+ +SS    ET+  +Q++ + +        +  GH+ A      A+ N  LS
Sbjct: 233 DVDLNVAFENNSSQIKAETMNDIQRLADFMKEYKNTSVVIEGHSSA---AGSAKYNLALS 289

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
             RA +   +L+    + E R+S   GF   +L    +       NRR+
Sbjct: 290 QKRADAVKSLLINKFDIEESRLSA-KGFGETQLISKGNTAADHELNRRV 337


>gi|327404493|ref|YP_004345331.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320001|gb|AEA44493.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 279

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S   PE    L +I  V+   T+  + + G+TDA       + N  LS 
Sbjct: 172 DFKPIYFDYDKSDIRPEFESFLNRIVYVINSHTDLRVKVTGNTDAD---GSDQYNDGLSE 228

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            RA +     +K+G+  DRI  I           ++       NRR+D 
Sbjct: 229 RRAEAIIAFFVKAGLKRDRIV-IDFKGEKNPVSDNNSDEGKQLNRRVDF 276


>gi|262068311|ref|ZP_06027923.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
 gi|291377972|gb|EFE85490.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
          Length = 122

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           K +          ++I+       FD   S+  P+   +L  + + +  +   +++ GHT
Sbjct: 14  KNIDITNMEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYEVTLEGHT 73

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           D+       + N  LS  RA +    L++ G++E+RI  I           +
Sbjct: 74  DSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATN 122


>gi|206580983|ref|YP_002237058.1| OmpA family protein [Klebsiella pneumoniae 342]
 gi|288934021|ref|YP_003438080.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
 gi|290510919|ref|ZP_06550288.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
 gi|206570041|gb|ACI11817.1| OmpA family protein [Klebsiella pneumoniae 342]
 gi|288888750|gb|ADC57068.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
 gi|289775912|gb|EFD83911.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
          Length = 160

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           ++ +FDK+     P++   +  +   LA +      + GHTD          N  LSL R
Sbjct: 52  DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A S      +   V    +    G        ++D     + NRR+ +++
Sbjct: 109 ANSVADAWAEGAHVPRSHLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 157


>gi|167918843|ref|ZP_02505934.1| ompA family protein [Burkholderia pseudomallei BCC215]
          Length = 290

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 231

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAAEPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290


>gi|260060612|ref|YP_003193692.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88784742|gb|EAR15911.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 623

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 4/105 (3%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             +     +      +     F + SS    E    LQ+  + L       I I  HTD+
Sbjct: 490 SVDEVVRSVRERQELKAEKFYFGRGSSRLTDEIRTALQEPLQALRDFPGLHIRIEAHTDS 549

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                  + N  LS  RA +    L+++G+  +RI  I GF   +
Sbjct: 550 R---GSEQANLSLSRQRAEAIRDYLVENGIDAERIEGIEGFGESQ 591


>gi|330447358|ref|ZP_08311007.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491549|dbj|GAA05504.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 200

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 17/147 (11%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           ++   +   S +   V +N          R  + I+         F   S++  P+    
Sbjct: 46  IEAREQCAKSAVGAEVDNNGCSSQSEYIVRRDLHIN---------FANDSAVVEPQYQGQ 96

Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
           + K+ + +       ++I GHT           N  LS  RA +    L    G+S +RI
Sbjct: 97  IAKLADFMKQYPASKVTIEGHTSKV---GRYDYNMVLSQRRAENVATDLEHQFGISANRI 153

Query: 310 SKISGFAHHRLKIASDPMNS--ANRRI 334
             I G+ +  L        +   NRRI
Sbjct: 154 KAI-GYGYTHLLDTGMTEEANQKNRRI 179


>gi|289676756|ref|ZP_06497646.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
 gi|330898576|gb|EGH29995.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330981564|gb|EGH79667.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 300

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +             ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281


>gi|254418180|ref|ZP_05031904.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
           BAL3]
 gi|196184357|gb|EDX79333.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
           BAL3]
          Length = 184

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S     E +  L    + L    +  + I G+ D          N  L   R
Sbjct: 74  DRIYFDLDSYDVRSEAMPRLDAQAQWLQRYPQVTVRIEGNADER---GTREYNLALGARR 130

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           A +    L+  GV   RI  IS +   R           + NR
Sbjct: 131 AEAVRTYLINRGVPAGRIDTIS-YGKERPIAEGSSEDSWARNR 172


>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
 gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
          Length = 364

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       I + G+TD          N  LS 
Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA S    ++  GV+ + I+ + G+        +               + +RR+++ V
Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGSK 360


>gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi]
          Length = 364

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       I + G+TD          N  LS 
Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA S    ++  GV+ + I+ + G+        +               + +RR+++ V
Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGSK 360


>gi|56697940|ref|YP_168311.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
 gi|56679677|gb|AAV96343.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
          Length = 181

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE    L    + L  +T+   +I GH D          N  L   R
Sbjct: 71  DRVLFAVDQSTLGPEAQATLGAQAQWLLTNTDYTATIEGHADEQ---GTREYNLALGARR 127

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
           A +A + L+  GV+  R+  +S +   R     + +   S NRR   ++   
Sbjct: 128 ANAAREFLISRGVAGSRLKTVS-YGKERPIEICSDEACYSKNRRAVTVLTTD 178


>gi|332877757|ref|ZP_08445498.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684337|gb|EGJ57193.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 660

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD + +    +    L KI +V+     +   +R HTD+       + N  LS 
Sbjct: 546 NIENIYFDYNKANIRKDAAEQLAKIVKVMQEHPTMTVDVRLHTDSR---GSDKYNLALSQ 602

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S  + +   G+ ++RI    G+   +L          ++  + ANRR + ++
Sbjct: 603 RRAKSTIKWITSHGIKKNRI-TGKGYGETQLVNECSNGVPCTEEQHQANRRSEFII 657


>gi|327399143|ref|YP_004340012.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
 gi|327181772|gb|AEA33953.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
          Length = 172

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +          VL  I + +       I I G+ D          N  L   RA +A + 
Sbjct: 72  NKWGIKQNVPAVLDGIAQYMVKHPNVRIRIEGNCDER---GTVEYNLALGQKRALAAKKY 128

Query: 299 LMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           L+  GV+ DRI  IS +   R      ++   + NRR   ++  +
Sbjct: 129 LVAKGVNPDRIDIIS-YGESRPLDPAHNEYAWAKNRRDHFVILSK 172


>gi|260574615|ref|ZP_05842618.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259023032|gb|EEW26325.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 213

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S++        L +    +    E    + GH D          N  L L RA + 
Sbjct: 69  FEFNSAVLDGAAQAALDQQANWIRQFPEVRFRVYGHADRVGSNG---YNHALGLKRARAV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L   G+S  R+  +  +   R  + +      NRR
Sbjct: 126 VSYLNSRGISRSRLEAMVSYGETRPVVDTLGPEVRNRR 163


>gi|298488736|ref|ZP_07006765.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156809|gb|EFH97900.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 301

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +         +   ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLVPNTNEANRARNRRVNVHLER 281


>gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 647

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S    +  ++++K+   L       I I  HTDA         N RLS 
Sbjct: 534 NLEKIYFDFDQSYIRKDAQIIMEKVIAYLNQYPNTKIRIGSHTDAI---ANDAYNSRLSE 590

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------KIASDPMNSANRRIDILV 338
            RA + Y+ L+K G++  R+    GF   +L          S   +  NRR + +V
Sbjct: 591 RRAKATYEYLVKKGIAASRL-TFKGFGETQLNNECKNTVNCSAEKHQLNRRSEFIV 645


>gi|260576643|ref|ZP_05844630.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
 gi|259021128|gb|EEW24437.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
          Length = 177

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F    S    +    L    + L  + +  I I GH D          N  L   R
Sbjct: 67  DRVFFAVDQSNLSDQARATLAGQAQWLNTNRDYAIIIEGHADEQ---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +    L+  GV+  R+  +S +   R        +  S NRR
Sbjct: 124 ASAVQNYLISQGVTASRMRTVS-YGKERPIEVCSTEDCYSRNRR 166


>gi|188577427|ref|YP_001914356.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521879|gb|ACD59824.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 148

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 39  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 95

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            R  +    L  +G S  ++  +  +   R     +++   S NRR++I+
Sbjct: 96  RRGNAVSSSLQAAGGSASQL-TVVSYGEERPVCTESNESCWSQNRRVEIV 144


>gi|167563638|ref|ZP_02356554.1| ompA family protein [Burkholderia oklahomensis EO147]
          Length = 209

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L ++   +      + +  G+TD        + N RLSL RA +
Sbjct: 86  LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342
               L+  GV  +++    G         +      N           RR+++ V   Q
Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199


>gi|257125161|ref|YP_003163275.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257049100|gb|ACV38284.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 366

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F     IP       L+ I  V+    +  SI   GHTD++        N +LS+ RA +
Sbjct: 250 FKVDGRIPNEREAGDLRAIAGVINQFADGGSIDFVGHTDST---GSDAYNQKLSVARAQN 306

Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             ++L + G+        I+G         +D  +    NRR+++  ++
Sbjct: 307 VARLLREYGLKNTISYGTITGQGESNPADTNDTTDGRYNNRRVELFFQN 355


>gi|171912007|ref|ZP_02927477.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 1122

 Score = 79.2 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 16/161 (9%)

Query: 189  KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP---------MFDK 239
            ++  +D+   I        + +           T + +                   F  
Sbjct: 963  QRIAEDVGFFIQPERQVPQSPDPDDTGKRNEQSTWLTLRFDSNDGNLNAPSVQQLNRFFI 1022

Query: 240  SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             +     E   + +K    L        + GH D+         N RLS  RA +    +
Sbjct: 1023 GAPTLDDEEKRIDRKRRSDLL-IQYRFVLEGHADSI---GTEASNMRLSERRARTVATFI 1078

Query: 300  MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               GV   ++  I  F        +        NRR++I +
Sbjct: 1079 ESMGVDRSKL-SIKWFGESLPVDDNSVEAGRYKNRRVEIRL 1118


>gi|323963914|gb|EGB59407.1| OmpA family protein [Escherichia coli M863]
          Length = 160

 Score = 78.9 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G    R     G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|37704660|gb|AAR01602.1| OprF [Pseudomonas sp. MFY160]
          Length = 316

 Score = 78.9 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+    +   ++ + + +       + + GHT
Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGHT 269

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS  RA +  QVL    GV   R+  + G+   R   
Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316


>gi|163733522|ref|ZP_02140965.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
           litoralis Och 149]
 gi|161393310|gb|EDQ17636.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
           litoralis Och 149]
          Length = 173

 Score = 78.9 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S         ++   + L A++     I GH D          N  L   R
Sbjct: 63  DRVLFSVDESAINAVGQTTVEGQAQWLLANTDYTAVIEGHADEQ---GTREYNVALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +  + L+  GV+ +R+  +S +   R           + NRR
Sbjct: 120 ANAVREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRR 162


>gi|325923404|ref|ZP_08185069.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
           19865]
 gi|325546119|gb|EGD17308.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
           19865]
          Length = 172

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD       PE   ++    + L       I+++G+ D          N  L  
Sbjct: 63  RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            R  +    L  +G S  +++ +S +   R           S NRR++I+
Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTETSESCWSQNRRVEIV 168


>gi|183220368|ref|YP_001838364.1| hypothetical protein LEPBI_I0964 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910483|ref|YP_001962038.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167775159|gb|ABZ93460.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167778790|gb|ABZ97088.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 229

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             E     +   +I       F    S   P+   ++ K+G+ +    E    I GHTD+
Sbjct: 101 RIEDDEKRLRELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDS 160

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
                    N +LS +R+ S  + L +   ++E+R  ++ G+A  +  + +      NRR
Sbjct: 161 V---GAFSMNLKLSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRR 217

Query: 334 IDILV 338
            +I V
Sbjct: 218 TEIYV 222


>gi|256828444|ref|YP_003157172.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256577620|gb|ACU88756.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 198

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    E+  V   I E +   ++  + I GH+D         DN RLSL+RA  A
Sbjct: 97  FEFGRSELTAESKPVPPMIIEAITRRNSRDVRINGHSDTI---GQREDNARLSLERAEGA 153

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             +L+K G+    I ++       L I +  D     NRR+++LV 
Sbjct: 154 RDILIKEGIDPS-IMQVFSHGEGNLLIPTADDTPEPRNRRVEVLVR 198


>gi|221068061|ref|ZP_03544166.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
 gi|220713084|gb|EED68452.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
          Length = 175

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD  S     +    ++   + +  +    + + GHTD          N  L   R
Sbjct: 70  RIVYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDER---GGREYNLALGQKR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           A +  + L   GV++ ++  +S +   +        +  + NRR++I
Sbjct: 127 AEAVRRSLGLLGVNDAQVEAVS-YGKEKPAAEGHGEDAYAQNRRVEI 172


>gi|121594094|ref|YP_985990.1| TonB box domain-containing protein [Acidovorax sp. JS42]
 gi|222111172|ref|YP_002553436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
 gi|120606174|gb|ABM41914.1| TonB box domain protein [Acidovorax sp. JS42]
 gi|221730616|gb|ACM33436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
          Length = 180

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S I  PE   VL+     +  S+    +  GHTD          N  L   RA + 
Sbjct: 79  FDFDSFIVKPEFQSVLEAHARFMKASSARKVVLEGHTDER---GGREYNLALGQKRAEAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
            + L   GV + ++  +S F   +  +     ++   NRR+++
Sbjct: 136 RRSLGLLGVQDAQVEAVS-FGKEKPAVQGHTEDAHSQNRRVEL 177


>gi|90578134|ref|ZP_01233945.1| putative outer membrane protein [Vibrio angustum S14]
 gi|90441220|gb|EAS66400.1| putative outer membrane protein [Vibrio angustum S14]
          Length = 196

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 60/171 (35%), Gaps = 9/171 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS  +    K+ K L D             AD  +  V+        + +  +     +
Sbjct: 17  SLSVPQPPIAKQTKDLFDADSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS      +  +  + E LA      I ++G+         A  N  LS  RA + 
Sbjct: 77  FANDSSEIPESYMENISNMSEFLAKYPKTHIELKGYASPV---GNAAYNVGLSKRRAAAI 133

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343
            Q L+  GV+  RI  I GF       ASD   S N   RR+   V   QG
Sbjct: 134 QQALITEGVAPSRIKTI-GFGDSDPVKASDAEES-NTLSRRVVAQVVGSQG 182


>gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter
           actinomycetemcomitans]
          Length = 346

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 16/131 (12%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++       +   F    +   P+    L  I   +A      + + G+TD         
Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------N 331
            N +LS  RA +    L+  GVS+  IS  +G         +  D +            +
Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGNKCDVVKGRKALIACLADD 335

Query: 332 RRIDILVEDRQ 342
           RR++I V   +
Sbjct: 336 RRVEIAVNGTK 346


>gi|319954323|ref|YP_004165590.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319422983|gb|ADV50092.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 639

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F+ +SS         L K+   +       + +  H+D+       R N  LS 
Sbjct: 525 KLKTIFFNTNSSYLNANAYPELDKVVAYMKEFPNARVEVGSHSDSRD---SDRYNLWLSD 581

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA S    ++  G+SEDRI+  +G+    L          S+  ++ NRR + +V
Sbjct: 582 RRAKSTVSYIVSMGISEDRITA-TGYGETLLVNKCINDAPCSEAEHALNRRSEFIV 636


>gi|284038460|ref|YP_003388390.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283817753|gb|ADB39591.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 798

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D + +   P+  V L K+ E+L     +   +R HTD+      A  N  LS +R
Sbjct: 685 DNIYYDLNKATIRPDAAVELDKVVELLTKYPAMTIEMRSHTDSR---ATAVYNKTLSGNR 741

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A S    L   G++ +R+    G+   +L          S+  +  NRR +I +  
Sbjct: 742 AKSVVAYLKSKGIAMERMIA-KGYGESQLLNKCKDGVECSEEDHQKNRRTEIKILK 796


>gi|83647008|ref|YP_435443.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83635051|gb|ABC31018.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 493

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 8/149 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D        L     ++ +  V  ++    I  +         FD   ++   E+   L
Sbjct: 345 EDETAVQQIILESEALEDDLITVDVDSLSRDIDETGKALLYGVFFDTDKAVVKDESKPTL 404

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310
           + I  +L    E++  + GHTD +      + N  LS  RA +  + L+K  GV++ R++
Sbjct: 405 EAIAGLLKKRPELLLYVTGHTDDT---GAFQHNIELSSARAKAVVERLIKDYGVAQARLT 461

Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDIL 337
              G      +  +        NRR++++
Sbjct: 462 PY-GVGPVAPEADNLSDAGKKRNRRVELI 489


>gi|325286038|ref|YP_004261828.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324321492|gb|ADY28957.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 305

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 9/125 (7%)

Query: 220 TRTGILISIIDQRNTPMFDKSS--SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
               + + I        F           E    +  I   L      + ++ GHTD + 
Sbjct: 185 QMDALYLKIKSNPLVLHFKTGQAAINLTAEQRQKIADISTYLDKVEGAMCNVVGHTDNT- 243

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
                  N  L L RA  A + L  +G+S  +I+  S          +D     + NRR 
Sbjct: 244 --GDRTTNIGLGLKRAEFAKEYLTNNGISPSKINT-SSKGPDEPIATNDTEEGKAQNRRT 300

Query: 335 DILVE 339
            I ++
Sbjct: 301 VITLK 305


>gi|323698017|ref|ZP_08109929.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
 gi|323457949|gb|EGB13814.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
          Length = 240

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 9/180 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
             + +   +    L PL         R            +    L         +     
Sbjct: 63  SRQSAEKAQAAGALDPLMGLIGQIASRADTGGSRDVVRMAEKEVLYRSRTNGITVVREAP 122

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             + +++   R    FD +S    PE+   L +IG+V+  S  ++ + G  D S      
Sbjct: 123 GRVRVTL---RGDLFFDGNSGRLKPESAAYLDEIGDVVRLSVGLVHVIGFADQSEAEGS- 178

Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             ++ LS +RA S    L+ + G+   R+  I+G   ++ ++      +   NRR++I++
Sbjct: 179 -SSFTLSSERAASVADQLITRLGIEPKRLV-ITGRGAYQPELPDTSAANQTLNRRVEIVI 236



 Score = 39.9 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 52/175 (29%), Gaps = 6/175 (3%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLMTA 79
            D       W + ++D M V+   F+V++I  +T  D K    +   +     G      
Sbjct: 21  PDPNRGANDWAVPWSDLMMVMFVLFVVLFIYTSTKQDVKILFSRQSAEKAQAAGALDPLM 80

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDE--HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                         S++ + ++  E  + ++ +    +     + +     +  F  ++ 
Sbjct: 81  GLIGQIASRADTGGSRDVVRMAEKEVLYRSRTNGITVVREAPGRVRVTLRGDLFFDGNSG 140

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
           +        L    +  +       +    ++ E       +     A     +L
Sbjct: 141 RLKPESAAYLDEIGDVVRLSVGLVHVIGFADQSEAEGSSSFTLSSERAASVADQL 195


>gi|253990221|ref|YP_003041577.1| outer membrane protein A [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781671|emb|CAQ84834.1| outer membrane protein a (outer membrane protein ii*) [Photorhabdus
           asymbiotica]
          Length = 366

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F  +SS    E    L ++   LAH       + + G+TD          N +LS
Sbjct: 237 RSDVLFAFASSELKAEGKHTLDQLYTELAHIDPTQGKVLVLGYTDRI---GKDVYNQKLS 293

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337
             RA S    L+  G+    IS   G             +           + +RR++I 
Sbjct: 294 QKRAQSVVDYLVTKGIPAGSISA-EGHGKANPV-TGSTCDKVLKPNLISCLAPDRRVEIE 351

Query: 338 VEDRQ 342
           ++  +
Sbjct: 352 IQGTK 356


>gi|292490342|ref|YP_003525781.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
 gi|291578937|gb|ADE13394.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
          Length = 191

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  SS    +   +++  G+ LA   +V  ++ GHTD          N  L   RA + 
Sbjct: 88  FEFDSSEIQEDDRPIVEAHGDYLAKHPDVSLTLEGHTDER---GSREYNLALGERRANAV 144

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            ++++  G SED++ ++  +   R  +    +     NRR++IL
Sbjct: 145 RRLVLLMGASEDQV-QVVSYGEERPAVDGHDEGAWQLNRRVEIL 187


>gi|288959770|ref|YP_003450110.1| outer membrane protein [Azospirillum sp. B510]
 gi|288912078|dbj|BAI73566.1| outer membrane protein [Azospirillum sp. B510]
          Length = 203

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S   P    V+   +  +L +    I + GHTD          N +LS+
Sbjct: 89  SEYLVFFDWDKSTITPAADRVIGDAVSAILKNGGAKIQVVGHTDT---SGSPAYNQKLSV 145

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            RA +  + L+  G+    I+   G    +L + + P     +NRR  IL
Sbjct: 146 RRADAVKKALVAKGIQAANITT-EGKGESQLLVQTGPNVREPSNRRAQIL 194


>gi|257453916|ref|ZP_05619193.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
 gi|257448688|gb|EEV23654.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
          Length = 216

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 23/153 (15%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L A+    GV          I++        F    S  LP     L K+  
Sbjct: 76  YMQQQEAKLRAETAGSGVTVTRDPVTNNINLS-IPEAITFRVGDSTILPNFYNTLDKVAT 134

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            L    +  I + G+         A  N  LS  RA +    L+  G+S +RIS I G  
Sbjct: 135 TLRDYNQTNIQVNGYAS---VEGDANRNQALSQRRASAVANYLVNRGISGNRISAI-GRG 190

Query: 317 -------HHRLKIASDPMNSANRRIDILVEDRQ 342
                   +            NRR+++++   Q
Sbjct: 191 ATTQFGSSYEP----------NRRVEMIILAPQ 213


>gi|288940691|ref|YP_003442931.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
           180]
 gi|288896063|gb|ADC61899.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
           180]
          Length = 177

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           + T  FD  ++   P+ + V++     L        ++ GHTD          N  LS  
Sbjct: 72  QRTIYFDYDTAEIKPQYLDVIRTHARYLGSQPGTRVTLEGHTDER---GTREYNLALSDQ 128

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
           RA S  + ++  GV  +++  I  +   R             NRR+ I
Sbjct: 129 RADSVRRFMLAEGVPANQM-TILSYGEERPADPGHSEQSWRLNRRVII 175


>gi|254487597|ref|ZP_05100802.1| OmpA family domain protein [Roseobacter sp. GAI101]
 gi|214044466|gb|EEB85104.1| OmpA family domain protein [Roseobacter sp. GAI101]
          Length = 312

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 12/169 (7%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FD 238
                    +Q +  +  S  +          V        +  ++++     +    F+
Sbjct: 147 ASTAATSAYVQIIQARSLSDTAAEPTGAADTQVAEIRQPDALAATLVNTGRVVLSSLEFE 206

Query: 239 KSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             +S   P  +  L  +   LA      +++ GHTD         DN  LS  RA S  Q
Sbjct: 207 TGTSGLGPAKVAALDSLAAFLAGDPALRVALVGHTDTV---GGLEDNVALSRSRAASVRQ 263

Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
            L+   GVS D++    G  +     ++        NRR++ ++    G
Sbjct: 264 RLIDAYGVSPDQLEA-QGMGYLAPIASNLTAQGREANRRVEAVLLPEPG 311


>gi|49182348|gb|AAT57676.1| OmpA [Pasteurella multocida]
          Length = 349

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P    VL  I   +A      +++ G+TD          N +LS  RA + 
Sbjct: 236 FGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRL---GSDAYNLKLSQRRADTV 292

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342
              L+  GV+++ IS  +G         +  D +            +RR++I V+  +
Sbjct: 293 ANYLVAKGVAQNAISA-TGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGNK 349


>gi|294670501|ref|ZP_06735381.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307780|gb|EFE49023.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 271

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F+       P+ I  L  +   L+  + + + + GHTD   F    + N  LS  RA +
Sbjct: 90  LFNFDKDNLRPQAIETLNSLAARLSDANVQAVRVEGHTD---FMGSEQYNQALSERRANA 146

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+  GV   +IS + G    +
Sbjct: 147 VANYLVNQGVPAGKISAV-GLGESQ 170


>gi|302387785|ref|YP_003823607.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
 gi|302198413|gb|ADL05984.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
          Length = 262

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 16  IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75
           +IKK    ++    LGSW   Y D +T+L+ FF++++ +++ D    K + Q FNP    
Sbjct: 1   MIKKDKKPEE----LGSWMDTYGDMVTLLLCFFVLLYSMSSVDQSKWKLLVQSFNP--SA 54

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           L  + + + D +                   T
Sbjct: 55  LEESDQVVLDAKVTEGEGKLTGGIPDDGGGAT 86



 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 17/198 (8%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           +           +  ++ +       L+              +L   +   +      N+
Sbjct: 48  QSFNPSALEESDQVVLDAKVTEGEGKLTGGIPDDGGGATDFDELYLVLKQIVED---RNM 104

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISI 268
              V          IS  D+     FD  SS+   E   VL +    +     S + + +
Sbjct: 105 QDSVEITRGDGFTFISFRDK---VFFDGDSSVLRQEGKDVLTQFAAAMSQANKSIKEVQV 161

Query: 269 RGHT---DASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI-- 322
            GHT   D     NI  D   LS  R+      L     VS +++  +S F   R     
Sbjct: 162 LGHTSQGDPQRPNNIRNDRM-LSAQRSAEVIIYLQSQNAVSPEKLVGMS-FGQFRPIAQF 219

Query: 323 ASDPMNSANRRIDILVED 340
            ++   + NRR++IL+  
Sbjct: 220 DTEEGRAQNRRVEILITK 237


>gi|114765730|ref|ZP_01444828.1| peptidoglycan-associated lipoprotein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541947|gb|EAU44982.1| peptidoglycan-associated lipoprotein [Roseovarius sp. HTCC2601]
          Length = 174

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE    L      L  +++ +++  GH D          N  L   R
Sbjct: 64  DRVLFLVDQSSLTPEAQATLDAQAGWLMTNSDYLAVIEGHADEQ---GTREYNIALGARR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +  + L+  GV+ +R+  IS +   R     + +   + NRR
Sbjct: 121 ANATMEYLISKGVAPNRLKIIS-YGKERPVEICSEESCYAKNRR 163


>gi|66047120|ref|YP_236961.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63257827|gb|AAY38923.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 300

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   GV E +I  +             ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281


>gi|237746664|ref|ZP_04577144.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
           HOxBLS]
 gi|229378015|gb|EEO28106.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
           HOxBLS]
          Length = 167

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S +   E   V+      L        + +G+TD       +  N  L   
Sbjct: 61  QKSVYFDFDSYVVKGEYQPVVDAHARYLNGHRNRTVVIQGNTDER---GGSEYNLALGQK 117

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + +   GV + ++  +S F   + +    ++   + NRR DI+
Sbjct: 118 RAEAVRKAMALMGVPDSQMEAVS-FGKEKPRATGNNEAAWAENRRADIV 165


>gi|254228271|ref|ZP_04921700.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262394176|ref|YP_003286030.1| outer membrane protein [Vibrio sp. Ex25]
 gi|151939344|gb|EDN58173.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262337770|gb|ACY51565.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 204

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283
           + S  + +   +F   S +  P     ++++ + L       I I+G+   +     A  
Sbjct: 72  VDSSQEMQIRVLFANDSDVINPIFTEQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 128

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340
           N  LS  RA +  + LM +G+S DR+  I G+               ++ NRR+   V  
Sbjct: 129 NLDLSKRRAENVRKELMMNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 186

Query: 341 RQG 343
            +G
Sbjct: 187 HKG 189


>gi|76812099|ref|YP_333598.1| ompA family protein [Burkholderia pseudomallei 1710b]
 gi|76581552|gb|ABA51027.1| ompA family protein [Burkholderia pseudomallei 1710b]
          Length = 290

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 231

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290


>gi|89075158|ref|ZP_01161594.1| putative outer membrane protein [Photobacterium sp. SKA34]
 gi|89049112|gb|EAR54678.1| putative outer membrane protein [Photobacterium sp. SKA34]
          Length = 196

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 7/170 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS  +    K+ K L D             AD  +  V+        + +  +     +
Sbjct: 17  SLSVPQPPITKQTKDLYDADSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS      +  +  + E L       I ++G+            N  LS  RA   
Sbjct: 77  FANDSSEIPESYMENISNMSEFLTKYPKTHIELKGYASPV---GNTAYNVELSKRRAAVI 133

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
            Q L+  G+   RI  I GF       ASD     + +RR+   V   QG
Sbjct: 134 RQALITEGIVPSRIKTI-GFGDSDPVKASDVEESNALSRRVVAQVVGSQG 182


>gi|237750612|ref|ZP_04581092.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
           43879]
 gi|229373702|gb|EEO24093.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
           43879]
          Length = 255

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLS 288
            +  +F+  ++     +    L  +   +A       I+IRG+TD S      R+N+ L+
Sbjct: 127 PSDILFEPGTAELVNQDRKTELDLLATAIAKMPPEVTINIRGYTDNSSPAG-YRNNYELA 185

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             RA +  + LM  GV   R+   + +  +   + +       AN R+++ 
Sbjct: 186 AARASNVMEYLMSRGVDPARL-SFTSYGQYNPIVPNTSEVNRRANNRVEVF 235



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 3/157 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK   ++ P     W + YADF+++L+A F+ ++ I+A +    KA+ + F         
Sbjct: 3   KKCKCEECPAG-EKWAVPYADFLSLLLALFIALYAISAANTSRVKAVTEAFITIFDATPM 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
             + +     PP+  +  +      ++ + N        T  +     L  +   L   +
Sbjct: 62  PERTMPVMIIPPDPGTVRQETKDTLKNTSTNLNAPTTVVTITQ--LSNLIQDGGLLEQIE 119

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           Q    +       E G     + D +  ++       
Sbjct: 120 QGTTLRLPSDILFEPGTAELVNQDRKTELDLLATAIA 156


>gi|228472824|ref|ZP_04057582.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228275875|gb|EEK14641.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 393

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 11/225 (4%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK- 180
                  ++ F   N   +   + +L R         +  +LE+ +   E+      S  
Sbjct: 173 DGLSNTTHDGFKGLNFTGTIGLQVALGRHMIHADWYSEGKELERKLQAAEDRIAKAESDV 232

Query: 181 ---EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPM 236
               K L  K  + +     +I   L   + +        +         +I++      
Sbjct: 233 ANLAKKLDEKEDRMVDTNGNRIPDELENYLNEKYGSNAQNKYATGDAARELIEKGYINVY 292

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +SS P   ++  +  +   L  ++   ++  G+ D    +     N +LS  RA   
Sbjct: 293 FDFNSSKPQKSSLWAVDFVANYLKQNSGASVNAVGYADE---KGSENYNQKLSAKRAEVI 349

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSANRRIDILVE 339
            Q+L+  G++  ++    G    +   A+        RR+   ++
Sbjct: 350 KQLLVDRGINASQL-SFEGKGEDKTVNANSSNARQLARRVTFELK 393


>gi|167824061|ref|ZP_02455532.1| hypothetical protein Bpseu9_10300 [Burkholderia pseudomallei 9]
          Length = 290

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 231

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290


>gi|319954672|ref|YP_004165939.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319423332|gb|ADV50441.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 638

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     FD           + L+K+  VL     +   I  HTDA         N +LS 
Sbjct: 523 KVEPIYFDYDKYDITVRAEIELEKVLFVLREFPAIKIKIESHTDAR---GKDAYNLKLSD 579

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVEDR 341
           +RA +    L+  G+  +RI   +G+  ++LK   ++     +  +  NRR D ++  +
Sbjct: 580 NRAKATRDYLILKGIVANRIESANGYGEYQLKNECSNGVSCSEQKHLINRRSDFIIISK 638


>gi|330973095|gb|EGH73161.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 300

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARARARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   GV E +I  +             ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281


>gi|326336146|ref|ZP_08202318.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691655|gb|EGD33622.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 394

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 12/182 (6%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR-- 221
           + +  +         S  K L  K  + +     +I   +   + +        +     
Sbjct: 219 QAAEERIAKAESDVASLAKKLDEKEDRMIDTNGNRIPDEIENYLNEKYGNSANAQNYATG 278

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
                 I        FD +SS P   ++     +   L  ++    +I G+ D       
Sbjct: 279 DTARDLIEKGYINVYFDFNSSKPQKSSLWAADFVANYLKQNSGSSVNIVGYADEI---GG 335

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDIL 337
              N +LS  RA +  Q+L+  G+   R+    G    +       +       RR+   
Sbjct: 336 ENYNQKLSNKRAEAIKQLLVDRGIDASRL-SFEGKGEDKTVNVKAPN--ARQLARRVTFE 392

Query: 338 VE 339
           ++
Sbjct: 393 LK 394


>gi|153002489|ref|YP_001368170.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|217975056|ref|YP_002359807.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|151367107|gb|ABS10107.1| OmpA/MotB domain protein [Shewanella baltica OS185]
 gi|217500191|gb|ACK48384.1| OmpA/MotB domain protein [Shewanella baltica OS223]
          Length = 202

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+   PE    ++++   L        +I GHT  +        N  LS +RA +
Sbjct: 79  LFPNDSAYIAPEYYPQIEEVAVFLQQYPTTKVTIEGHTSRT---GTDERNLVLSQERADA 135

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
              VL +  G+  +R++   G+      +      +   NRR+
Sbjct: 136 VTAVLAERFGIDRNRLTA-KGYGSSNPVVLERTPEAEIRNRRV 177


>gi|301062462|ref|ZP_07203113.1| putative peptidoglycan-associated lipoprotein [delta
           proteobacterium NaphS2]
 gi|300443436|gb|EFK07550.1| putative peptidoglycan-associated lipoprotein [delta
           proteobacterium NaphS2]
          Length = 103

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   PE   +L+   + L  +      I G+ D          N  L   RA SA
Sbjct: 1   FDFDRSNLKPEAQEILRDKADFLRANRSYSVLIAGNCDDR---GTEEYNLALGERRAMSA 57

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDP-MNSANRR 333
            + L+  G+S DRI  IS +   R     ++P   + NRR
Sbjct: 58  KKFLVALGISPDRIKTIS-YGELRPADPANNPVAWALNRR 96


>gi|119775227|ref|YP_927967.1| OmpA/MotB [Shewanella amazonensis SB2B]
 gi|119767727|gb|ABM00298.1| OmpA/MotB [Shewanella amazonensis SB2B]
          Length = 289

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   +     +   L ++ E L+   +V  I I  +TD+         N ++S  RA S
Sbjct: 184 YESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDS---HGGRNLNQKVSDKRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
                +  G+  DRI    G    R   ++        NRR+ I +  
Sbjct: 241 VKDFFVSKGIPADRIQT-EGHGETRHVASNQGADERQRNRRVVIQITK 287


>gi|110086793|gb|ABG49460.1| hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 345

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 327 LIACLADDRRVEISVKGNE 345


>gi|117919656|ref|YP_868848.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117611988|gb|ABK47442.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 191

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L A++   +++ GHTD          N++LSL RA 
Sbjct: 85  VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  ++L++  G + +R   + G         +        NRR+  +V +
Sbjct: 142 NVKRILVEDYGFNPNRF-TVVGKGISEPVADNHSSEGRRLNRRVQFIVNN 190


>gi|212634650|ref|YP_002311175.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212556134|gb|ACJ28588.1| OmpA [Shewanella piezotolerans WP3]
          Length = 325

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   +         + K+ E LA   + +++ I  +TD+         N R+S+ RA S
Sbjct: 220 YESGGTELTRYAKAQINKVQEYLAYDQNVDLVLIDAYTDSY---GGRSANERVSVQRADS 276

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             ++ + SG+ + RI  + G    R   ++      + NRR+ I +   
Sbjct: 277 VKELFVASGIPQSRIHTM-GHGERRHVASNKTIDERARNRRVVIRISKP 324


>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
 gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
          Length = 367

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRI---GKEASNLKLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
          Length = 367

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRI---GKEASNLKLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|71733309|ref|YP_276024.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486625|ref|ZP_05640666.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624957|ref|ZP_06457911.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650466|ref|ZP_06481809.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|71553862|gb|AAZ33073.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320325629|gb|EFW81691.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327087|gb|EFW83101.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867247|gb|EGH01956.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330879063|gb|EGH13212.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889567|gb|EGH22228.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330989530|gb|EGH87633.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010107|gb|EGH90163.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 301

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +         +   ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLVPNTNEANRARNRRVNVHLER 281


>gi|85715944|ref|ZP_01046921.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
 gi|85697142|gb|EAQ35023.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
          Length = 314

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++  PE+   L +I ++L+        I GHTD+         N  LS  RA + 
Sbjct: 212 FDTDKAVIKPESRPTLDQIAKLLSGQPGFNVYIVGHTDSQ---GTPAHNLELSRRRAEAV 268

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            + L++   +++ R++   G        ++  D   + NRR++++
Sbjct: 269 AEDLVRTYKIAKARLNTA-GVGFLAPVGSNGTDAGRALNRRVELV 312


>gi|256823064|ref|YP_003147027.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
           16069]
 gi|256796603|gb|ACV27259.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
           16069]
          Length = 172

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 6/150 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K   + +        +       +             I+ +   N   FD        E 
Sbjct: 24  KPEEEQVDTTAQEDAAAQAEAEALARQRAAEEAERQRIAALLDNNVIYFDFDDDSIRSEY 83

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           + VL+     +  S + + + GH D          N  L   RA S  Q++   GVS+  
Sbjct: 84  VEVLEAHAMYIQSSGKSVVLEGHADER---GTPEYNLALGERRAKSVAQLMRTYGVSDSN 140

Query: 309 ISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           I ++  F          ++     NRR++I
Sbjct: 141 I-EVISFGEESPANPAHNESAWQENRRVEI 169


>gi|15604604|ref|NP_221122.1| peptidoglycan-associated lipoprotein precursor (pal) [Rickettsia
           prowazekii str. Madrid E]
 gi|3861299|emb|CAA15198.1| PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR (pal) [Rickettsia
           prowazekii]
 gi|292572420|gb|ADE30335.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
           prowazekii Rp22]
          Length = 155

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSSLSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTREYNLALGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
            Q L   G++ +R++ IS +   +  +  +   +   NRR
Sbjct: 110 KQFLANKGIAHNRLNTIS-YGKDKPAMIGNTEEAFSYNRR 148


>gi|107024169|ref|YP_622496.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116688504|ref|YP_834127.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|105894358|gb|ABF77523.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116646593|gb|ABK07234.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 85

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 + I GHTD          N  LS  RA +    L+   +   +++  +G    +
Sbjct: 7   KMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQ 62

Query: 320 LKIASDPM--NSANRRIDILV 338
               +D     + NRRI+  V
Sbjct: 63  PIAPNDTADGRARNRRIEFRV 83


>gi|110637015|ref|YP_677222.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
 gi|110279696|gb|ABG57882.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
          Length = 734

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           ++       + +  I + +   +D + +    +    L ++  +L  +  +   +  HTD
Sbjct: 605 IVDTLYMKKLEVGEIYKIDDIYYDYNKATIRQDAKPALDQLMNLLTENPTMKIQLNSHTD 664

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSA 330
                     N +LS +RA +    L++ G+S DR+    G+           ++     
Sbjct: 665 CR---GSDVYNMKLSQNRARAVVTYLVERGISADRLK-FKGYGETLPVTNCACTECTEQQ 720

Query: 331 ---NRRIDILV 338
              NRR +  +
Sbjct: 721 YQDNRRTEFQI 731


>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
          Length = 353

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V   +
Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVXGNK 353


>gi|332667957|ref|YP_004450745.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336771|gb|AEE53872.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 279

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSI--PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  +S+     P+    L+K+ + +A + E + + GHTD       A  N +L   RA  
Sbjct: 175 FPVNSTEKDYDPKVDAYLEKLAKRVAKTEERVELTGHTDND---GEADYNLKLGASRARQ 231

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              +L+K GV  D IS  S          +    +   NRR+++ +  +
Sbjct: 232 IRDLLVKLGVKADLISTAS-KGETLPVAPNTTDENRHNNRRVEVRLIKK 279


>gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 352

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 18/125 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    +   PE +  L  + + +           + G+TD         +N  LS 
Sbjct: 221 SDVLFAFGKAELKPEGMQALDALYQQIVDVQPKDGSALVMGYTDRI---GSDINNLALSE 277

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    L+  G+  D++  I G         S  D + +          +RR+++ V
Sbjct: 278 ARASTVANFLIGKGLPADKV-SIQGNGESNPVTGSQCDAIKAKAALIDCLGPDRRVEVRV 336

Query: 339 EDRQG 343
              QG
Sbjct: 337 TGVQG 341


>gi|33594231|ref|NP_881875.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
           Tohama I]
 gi|33598303|ref|NP_885946.1| putative peptidoglycan-associated lipoprotein [Bordetella
           parapertussis 12822]
 gi|33603213|ref|NP_890773.1| putative peptidoglycan-associated lipoprotein [Bordetella
           bronchiseptica RB50]
 gi|33564306|emb|CAE43607.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
           Tohama I]
 gi|33566861|emb|CAE39076.1| putative peptidoglycan-associated lipoprotein [Bordetella
           parapertussis]
 gi|33568844|emb|CAE34602.1| putative peptidoglycan-associated lipoprotein [Bordetella
           bronchiseptica RB50]
 gi|332383645|gb|AEE68492.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
           CS]
          Length = 165

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           SI+ Q+ +  FD  S     +   +++     LA + +    I G+TD       A  N 
Sbjct: 53  SILAQQRSVYFDFDSYTVSEQYRGLVETHARYLASNNQQRIKIEGNTDER---GGAEYNL 109

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            L   RA +  +++   GVS+++I  IS F   + K         + NRR DI+
Sbjct: 110 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKATGSSEADFAENRRADIV 162


>gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510]
 gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510]
          Length = 347

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
                 FD   S   P +  ++    E    +  V I + GHTD          N +LSL
Sbjct: 238 SEYQVFFDWDKSAITPNSDKIIADAAEAAGRARAVRIQVIGHTDT---SGSPSYNQKLSL 294

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            RA +  + L+  G   + I  I G   ++L + + P     +NRR  I+++
Sbjct: 295 RRAEAVRKALVGHGTPAN-IISIEGVGENQLMVPTGPNVREPSNRRAQIMIK 345


>gi|325269973|ref|ZP_08136582.1| OmpA family protein [Prevotella multiformis DSM 16608]
 gi|324987696|gb|EGC19670.1| OmpA family protein [Prevotella multiformis DSM 16608]
          Length = 697

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 34/138 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D   +   PE+   L ++ ++L  +    I +  HTD   +   A  N RLS  R
Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLDENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325
           A +    L   G++ DR++ + G+   R                 +D             
Sbjct: 586 ADAVVAYLTAHGIARDRLTPV-GYGKERPKKIRKKLTEKYPWLKENDVLTEDFIRKLDKE 644

Query: 326 ---PMNSANRRIDILVED 340
                N  NRR +  V  
Sbjct: 645 KQETANQLNRRTEFTVLR 662


>gi|294673972|ref|YP_003574588.1| OmpA family protein [Prevotella ruminicola 23]
 gi|294472547|gb|ADE81936.1| OmpA family protein [Prevotella ruminicola 23]
          Length = 679

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS         +D + +   PE+   L ++  +L  +    I +  HTD          N
Sbjct: 515 ISAPVLIENIFYDFNKATLRPESKTALDQLVVLLNQNPNVTIELSAHTDCR---GSEAYN 571

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RLS  RA S    L+  G++ DR++   G+     K
Sbjct: 572 QRLSQQRAESVVAYLIAHGIAADRLTP-KGYGESMPK 607


>gi|157374990|ref|YP_001473590.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157317364|gb|ABV36462.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 297

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   +         + KI E LA+  EV  + I  +TD+         N ++S +RA S
Sbjct: 192 YEFGGAELTRYAKAQIAKIQEYLAYDPEVELVLIDAYTDSY---GGRSINQKVSEERADS 248

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
                + +G++++RI  + G        ++D     S NRR+ I +   
Sbjct: 249 VKNFFLSAGITQERIHTV-GHGERHHVASNDTIDERSRNRRVVIRISKP 296


>gi|332529393|ref|ZP_08405354.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
           19624]
 gi|332041191|gb|EGI77556.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
           19624]
          Length = 203

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S   PE I  L  +       T E   + GHTD+         N +LS+ RA 
Sbjct: 97  VFFDFDKSELKPEAIASLDTLAAKAKGRTVEATIVVGHTDSI---GTPEYNLKLSVRRAE 153

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR--IDILVED 340
           +    L   G++   +    G         +D       NRR  I++++  
Sbjct: 154 AVKAHLTAQGINSASVFT-EGKGLTAPARPNDTAEGRAVNRRADIELVIVR 203


>gi|289549271|ref|YP_003474259.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
 gi|289182888|gb|ADC90132.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
          Length = 335

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 76/251 (30%), Gaps = 11/251 (4%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
            R+ + + +L   E I    +   I   + +     L             +    S    
Sbjct: 86  SRAKEGQYNLDTLEPIRPKDLPPYIRVGDLEDITSALFTIRANKGIQCTPKELAYSEAYY 145

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                 L           +     +  L++ K      K+   +        +       
Sbjct: 146 EALSYQLKGEVSQPAITMRVYQNLVSYLTEAKRKLEVAKREGLECYVGKREVVKEEEPQE 205

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269
                   T    +    +       F+ +S     E I +L ++  +L  + ++   I 
Sbjct: 206 SP----ISTGEKTVEREYLMVPARVHFEFNSYTIKKEYIPLLLEVARILKENPQIRVRIE 261

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+TD          N +L+  RA +    L K GV +D+I +I+GF        +     
Sbjct: 262 GYTDNI---GSKEYNEKLAFKRAKAVADFLKKQGVPQDKI-EIAGFGKEGYIAPNTTPIG 317

Query: 330 A--NRRIDILV 338
              NRR D +V
Sbjct: 318 RFTNRRADFIV 328


>gi|184216035|gb|ACC77464.1| outer membrane protein [Lawsonia intracellularis]
          Length = 340

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S         + ++   ++  + +    + G TD++        N RLS +RA + 
Sbjct: 239 FAFDSFALDDTAKAISEETVRLIRANPDFNVRLLGWTDST---GPDAYNLRLSQERADAV 295

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              L+K G+  +R+    G      +  +        NRR +++
Sbjct: 296 KNFLVKMGIPSNRLFA-KGMGKSY-QYNNATKEGRYMNRRTELV 337


>gi|256830358|ref|YP_003159086.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579534|gb|ACU90670.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 176

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F    S    ++  VL +  E+L       + I GH D          N  L   R
Sbjct: 69  DRIYFAFDRSELSDQSRQVLAEKAELLKTHAALSLLIEGHCDER---GTNEYNMALGERR 125

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           A +AY+ L+  G++ DRI+ IS +      +   ++   + NRR + 
Sbjct: 126 ARAAYEYLVLMGIASDRITIIS-YGEEYPAVPGSNEEAWAKNRRDEF 171


>gi|115375610|ref|ZP_01462867.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367386|gb|EAU66364.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 206

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   + +        L+ +   L                  + GHTD+      
Sbjct: 88  RKNQCSFKTGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDS---SGD 144

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A  N  LS  RA    + L+  G+    I  + G    +  +   D     + NRR +I 
Sbjct: 145 AAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRYEIQ 203

Query: 338 VE 339
           V 
Sbjct: 204 VR 205


>gi|323492706|ref|ZP_08097850.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
 gi|323313081|gb|EGA66201.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
          Length = 279

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 13/198 (6%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           +G   C    + +++ K+            + A       +    ++   L   V     
Sbjct: 72  EGARWCFPAAVVQALEKQNRIARELEGGLMLDAANDIVIQRKRLNELELQL-DYVTSQAK 130

Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                +       ++IID+  + +     F  +S+   P+ +  L +   +L   +   +
Sbjct: 131 CVPPMDENAFQQRLAIIDKLYSLLNVDNQFAFNSTEVNPKYMGHLARAANLLEQHSSLSL 190

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           ++ GH D+         N +L++ RA    + L+  G+S +RI   S           + 
Sbjct: 191 AVTGHADSV---GDLAYNQKLAMGRAQQVKRYLIIFGLSPERIKTHS-VGDTLPLYEGES 246

Query: 327 MNSA--NRRIDILVEDRQ 342
                 NRR+ I V D Q
Sbjct: 247 EGVRLTNRRVSIEVIDNQ 264


>gi|307719340|ref|YP_003874872.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
 gi|306533065|gb|ADN02599.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
          Length = 826

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 79/255 (30%), Gaps = 23/255 (9%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                 V +              +  + ++   +     ++     + K +    S   E
Sbjct: 578 DTVPPEVSVSAEPVPFSPDGDGRDEVVAFIPEVRDEAGIESWELMITNKDRRQTFSGGGE 637

Query: 165 KSINKEENYFLPPLS-KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
                  + F       E+         + DL   ++   + +V D     V       G
Sbjct: 638 PPAQIVWDGFFESGDLAEQAHEYPVVFTVTDLGGNVAKASALVVTD-----VYVVIKDGG 692

Query: 224 ILISIIDQRNTPMFDKSS-----SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             IS+ D    P F              E +  L ++  +L    +    + GH  +  +
Sbjct: 693 AYISVPDIHFAP-FTADYTDKVPPEIREENLRTLDEVAAMLKKFPQYTVQLEGHAVSLLW 751

Query: 278 RNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
            +  R           LS  RA +  + L+  GV   R+  I G+   R  +    +   
Sbjct: 752 FDPERAKIEHQEVLIPLSRARAEAVRKALISRGVDPSRL-SIVGYGGSRPIVPFSDLKKR 810

Query: 331 --NRRIDILVEDRQG 343
             NRR++ L++++ G
Sbjct: 811 WVNRRVEFLLKEKSG 825


>gi|303237216|ref|ZP_07323786.1| OmpA family protein [Prevotella disiens FB035-09AN]
 gi|302482603|gb|EFL45628.1| OmpA family protein [Prevotella disiens FB035-09AN]
          Length = 704

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 34/167 (20%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L  + + +   +        I +    +   +D   +   PE+   L  + ++L  + 
Sbjct: 507 EELKVEPVKETKEYTLQFPLASIRVPVMIDNIFYDFDKATLRPESEAALDNLVKLLNENP 566

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR--- 319
              I +  HTD   +   A  N  L+  RA +    L+K GVS DR+S + G+   +   
Sbjct: 567 NVTIELSAHTD---YLGRAEYNKNLAQRRADAVVAYLIKKGVSADRLSPV-GYGEGKPKT 622

Query: 320 --------------------------LKIASDPMNSANRRIDILVED 340
                                      K   +  N  NRR + +V  
Sbjct: 623 IRKKVAEKYPWLKEGQVLTEEFIKSLPKDKQEIANQMNRRTEFVVLR 669


>gi|238896049|ref|YP_002920785.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262043847|ref|ZP_06016937.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|238548367|dbj|BAH64718.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259038817|gb|EEW39998.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 160

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           ++ +FDK+     P++   +  +   LA +      + GHTD          N  LSL R
Sbjct: 52  DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A S      +   V    +    G        ++D     + NRR+ +++
Sbjct: 109 ANSVADAWAEGAHVPRSNLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 157


>gi|296445979|ref|ZP_06887929.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
           OB3b]
 gi|296256497|gb|EFH03574.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
           OB3b]
          Length = 167

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  SS         L K  + L        ++ GH D          N+ L   R
Sbjct: 58  DRIYFETDSSELTSTAQTTLDKQVDWLQRYGRYSFTVEGHADER---GTREYNFALGARR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A  A   L+  G+S  RI  IS +   R           S NRR
Sbjct: 115 AEVAKNYLVSRGLSAARIRTIS-YGKERPVAVCDDISCWSQNRR 157


>gi|53719284|ref|YP_108270.1| hypothetical protein BPSL1659 [Burkholderia pseudomallei K96243]
 gi|52209698|emb|CAH35657.1| putative exported protein [Burkholderia pseudomallei K96243]
          Length = 299

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 184 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 240

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 241 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 299


>gi|330949998|gb|EGH50258.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 300

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +             ++   + NRR+++ +E 
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281


>gi|260891273|ref|ZP_05902536.1| OmpA family protein [Leptotrichia hofstadii F0254]
 gi|260858949|gb|EEX73449.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 367

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F     +P       L+ I  V+    +  SI   GHTD++     A  N +LS+ RA +
Sbjct: 251 FKVDGRVPNEGEAADLRTIAGVINQFADGGSIDFVGHTDST---GSAAYNQKLSVARAQN 307

Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             ++L + G+        I+G         +D +     NRR+++  ++
Sbjct: 308 VAKLLREYGLKNTISYGTITGQGESNPADTNDTVEGRYNNRRVELFFQN 356


>gi|225011410|ref|ZP_03701848.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
 gi|225003913|gb|EEG41885.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
          Length = 370

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 16/216 (7%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            I  L+ ++++   +          +         + +   ++  L           K  
Sbjct: 163 PIQKLAANEKTTAEEIKGKYRLITRQVEVSPAQTRQEVIPSKSQTLERQILVTDETTKEI 222

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
               +  + I   L         + V       G L+ I     +      S+  + E I
Sbjct: 223 TVPAESTEIIKKILVKKGGTTAWREVPCTIPERGELLPIHYALGSAALTSKSTKIIDEYI 282

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +   K  + +     ++ I  HTD+         N  LS  RA S  + L+  G+++ R+
Sbjct: 283 LARMKADKNI-----LVEIGSHTDSR---GTDSLNMSLSERRAKSVVEYLISKGINKQRL 334

Query: 310 SKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
               G+   +L          S+ +++ NRR +  V
Sbjct: 335 IA-EGYGEDKLLNDCENGVDCSESLHANNRRTEFKV 369


>gi|86748022|ref|YP_484518.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86571050|gb|ABD05607.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 212

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 18/207 (8%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                 S         D      + +++  ++                 ++ +  L  + 
Sbjct: 15  GVGTALSFGAGMAFAADDATEDQILRALAPKKPLTRSLSPSRPAAEPAERQFVDTLRNRP 74

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           + +LS    + I      +     + I+         F+ +S+    +    ++ +G+ L
Sbjct: 75  TRSLSSSEREQIAAMAK-DKPNIDLEIT---------FEYNSANISRKAEPAVEALGKAL 124

Query: 260 AH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           A+         + GHTD+         N  LS  RA +  +VL++  G++   +  + G+
Sbjct: 125 ANPDLRGSTFVVAGHTDSI---GSDNYNQDLSERRADTIKRVLVEKYGIAGADLVTV-GY 180

Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342
              + K A +P +++NRR+ ++    Q
Sbjct: 181 GESKPKNADNPTDASNRRVQVVNMTSQ 207


>gi|297538334|ref|YP_003674103.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297257681|gb|ADI29526.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 377

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F    S        +L  +   L   +E     + G+TD          N +LS  RA 
Sbjct: 256 LFGFDKSKLQDGAKPILDGVVAKLKEHSEFKLVMVTGYTDRI---GSEAYNQKLSEHRAN 312

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILVEDRQ 342
                ++  G+   R+  + G       +    +           NRR+ +++++ Q
Sbjct: 313 EVKDYIVSQGIDAGRLQAV-GKGESEAVVDCKGIKGKKLISCLAPNRRV-VILDEEQ 367


>gi|291326447|ref|ZP_06124556.2| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
           1131]
 gi|291314244|gb|EFE54697.1| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
           1131]
          Length = 180

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q NT  F        PE   +L      L  +    + + GH D          N  L  
Sbjct: 74  QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +    L   GVS D++S +S +   +  +        + NRR  I
Sbjct: 131 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 178


>gi|110636551|ref|YP_676758.1| outer membrane peptidoglycan-associated lipoprotein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279232|gb|ABG57418.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 656

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              ++D       P+  V L  +  ++  + E  I +  HTD       A  N  L+  R
Sbjct: 537 RNILYDYDKWDIRPDAAVELDTMVMLMNANPEIQIELGSHTDER---GSAEYNRVLAQKR 593

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRIDILVED 340
           A +A   ++  G+S+DRI    G+      I +    +    NRR    V +
Sbjct: 594 AQAAVDYIIAHGISKDRIIA-KGYGEDEPAIRNAKTEADHQTNRRTTFKVLN 644


>gi|170725642|ref|YP_001759668.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810989|gb|ACA85573.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 367

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
              +  F  +SS+   E+   ++K+   +       + I GH         A  N  LS 
Sbjct: 250 DVGSIQFANNSSVVKNESYQQIEKLANYMNQHPKSTVLISGHASDV---GKAEYNMMLSD 306

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
            RA +  ++L++  G+++DR+    GF   +  I      +  ANRRI+
Sbjct: 307 KRANAVAKILVEKYGIAQDRVEA-KGFGITQPIIEGSSPAANKANRRIE 354


>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
          Length = 373

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 250 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 306

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 307 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 365

Query: 339 EDRQ 342
           +  +
Sbjct: 366 QGSK 369


>gi|75676006|ref|YP_318427.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74420876|gb|ABA05075.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 321

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 8/150 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L+D A  +         +  +  V     +  I        +  +FD        ++   
Sbjct: 172 LKDRALALLEITEAKPMEERMVVVESSAMQRDIASQGRVAIHGILFDFDKDTMRSDSKPQ 231

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRI 309
           L +I ++L    E  + I GHTD+   +     N  LS  RA S  + L  + GV+  R+
Sbjct: 232 LDEIAKLLKAQPELKVLIVGHTDS---KGALDYNRDLSYRRARSIVESLSREHGVAAARL 288

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           + + G         +        NRR++++
Sbjct: 289 TPL-GVGMAAPMATNRTEEGRALNRRVELV 317


>gi|187927866|ref|YP_001898353.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
 gi|241662454|ref|YP_002980814.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
 gi|187724756|gb|ACD25921.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
 gi|240864481|gb|ACS62142.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
          Length = 218

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L      + I  GHTD+       + N RLS+ RA +
Sbjct: 102 LFDFDKAVLKPEGKAKLDDLVSKLNGINLEVVIAVGHTDSF---GSDKYNDRLSVRRAEA 158

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342
               L+  G+  +R+    G    +LK+       +          NRR+D+ V   +
Sbjct: 159 VKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGTR 215


>gi|157960193|ref|YP_001500227.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845193|gb|ABV85692.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 201

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           Q    +F   S    P+    ++ I   +       ++  GH   +      + N  LS 
Sbjct: 73  QELKILFANDSYYIDPQYYPQVEVIASFMQKFPNTQAVIEGHCSKT---GSHQHNQVLSQ 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   +L +  G+   R+S + G++  R    +   ++   NRR+
Sbjct: 130 NRANAVSSLLAERFGIDSGRLSAV-GYSFDRPIDPTHTASAHKINRRV 176


>gi|315654589|ref|ZP_07907495.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
 gi|315491053|gb|EFU80672.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
          Length = 308

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 7/201 (3%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
              N L  +   G     ++ ++           P    E+I AM+    L  + K++  
Sbjct: 62  QIANPLQTNGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEE 121

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L     +     +    T  G+++ ++       F    +   P    VL+ I   L  
Sbjct: 122 QLKDAGKEG---SLAMRITDKGLVLGMVANDTY--FKTGDATIQPTAREVLKAISPTLMS 176

Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             E I+I G+ D  P  +     N+ L+  RA      L   GV   ++  IS  A H+ 
Sbjct: 177 IEEGIAIEGYADPQPIASAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQT 236

Query: 321 KI-ASDPMNSANRRIDILVED 340
           +        + NRR+DI++  
Sbjct: 237 EATPGQDAWAFNRRVDIVIMS 257



 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+      P+N   W + Y D +TV+M  FLV++ I+  D      +         + + 
Sbjct: 3   KRKHECPEPDNTERWAVSYLDMITVMMCLFLVLYAISQVDQGKLSKLRTSLAAGFNSTIQ 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +  +         +               N          Q  +     N+I      Q
Sbjct: 63  IANPLQTNGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQ 122

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             +  K          K L        +  K  +  + P ++E + A
Sbjct: 123 LKDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKA 169


>gi|162451691|ref|YP_001614058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161162273|emb|CAN93578.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 632

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 20/120 (16%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F     I L ++   L+ + +VL  + ++  +   GHTD    R     N  LS  R  S
Sbjct: 399 FATDKDIILEDSNSTLEAVAQVLIDNPDIREVRIEGHTD---VRATDLYNMALSQRRVAS 455

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNS----------ANRRIDILVED 340
               L+  GV   R+  + G+ H +          P +            NRR+   +  
Sbjct: 456 VMAYLIAKGVESSRLQAV-GYGHTQPIYDDTGCQGPDDQLSPDCQFMTSKNRRVVFRILR 514


>gi|150026440|ref|YP_001297266.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772981|emb|CAL44465.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 624

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S    E    L K+  V+    E++     HTD+       + N  LS  RA S 
Sbjct: 519 FDFNKSNITQEGAAELDKLVAVMTKYPEMVIFAKSHTDSR---GDDKYNMLLSDRRAKST 575

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341
            Q ++  G++ +RI    GF     K+     ++  +  NRR + ++  +
Sbjct: 576 VQYIISKGIAVNRI-TGEGFGKSEPKVQCDKCTEAEHQKNRRSEFMIVKK 624


>gi|145219968|ref|YP_001130677.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
           DSM 265]
 gi|145206132|gb|ABP37175.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
          Length = 152

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               +D   +    +    L K    +   +    +  GH D       +  N  L   R
Sbjct: 47  GDVFYDFDQASIRMDAAEQLSKNAAWMQEKSSKRVVIEGHCDER---GTSEYNMALGERR 103

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A  A + ++  GV  +R++ +S +   R     +++   + NRR
Sbjct: 104 ASMAKEYMVNLGVQPERMTTVS-YGEERPFAAGSNEEAWALNRR 146


>gi|309781036|ref|ZP_07675774.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
 gi|308920102|gb|EFP65761.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
          Length = 218

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L      + I  GHTD+       + N RLS+ RA +
Sbjct: 102 LFDFDKAVLKPEGKAKLDDLISKLNGINLEVVIAVGHTDSF---GSDKYNDRLSVRRAEA 158

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342
               L+  G+  +R+    G    +LK+       +          NRR+D+ V   +
Sbjct: 159 VKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGTR 215


>gi|94987133|ref|YP_595066.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
 gi|94731382|emb|CAJ54745.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
          Length = 162

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                FD       PE   +LQK  E+L     +   I G+ DA         N  L   
Sbjct: 54  DGIIYFDFDKYDIKPEYRDMLQKKAELLKEYPCIRVRIEGNCDAR---GTQEYNLALGER 110

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           RA +AY+ L+  GV+  ++  IS F   R  +        + NRR D  +  +
Sbjct: 111 RARAAYEYLVMLGVNPSQLEIIS-FGKERPAVEGTGPAVWAKNRRDDFRIIAK 162


>gi|258545746|ref|ZP_05705980.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
           15826]
 gi|258518991|gb|EEV87850.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
           15826]
          Length = 189

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288
           D+     F   SS     +  V+++  + L    +   +  GHTD          N  L 
Sbjct: 82  DKDRIIYFSYDSSAIDSRSEAVIREHAKYLRAHPQTRVVLEGHTDER---GTREYNIGLG 138

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             RAYS  +  + +G+S  ++ ++  +   R           + NRR  I+
Sbjct: 139 ERRAYSVKERFVAAGISPQQM-RVLSYGEERPAAFGSSEEDYAKNRRAVIV 188


>gi|288225943|gb|ADC44456.1| OmpA [Enterobacter sp. i1]
          Length = 111

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +   PE    L ++   L++       + + G+TD          N  LS
Sbjct: 23  KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 79

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
             RA S    L+  G+  D+IS   G       
Sbjct: 80  ERRAQSVVDYLISKGIPADKISA-RGMGESNPV 111


>gi|37704656|gb|AAR01600.1| OprF [Pseudomonas sp. MFY146]
          Length = 297

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++   + +  ++ + + +        ++ G+TD+         N +LS  RA S 
Sbjct: 215 FDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSV---GTDAYNLKLSQRRADSV 271

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322
            Q L++ GVS  R+  + G        
Sbjct: 272 RQALVQQGVSPSRVDAV-GHGKSDPVA 297


>gi|313892856|ref|ZP_07826435.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442610|gb|EFR61023.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 341

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   +    L            + + + G+ D        + N  LS  R    
Sbjct: 239 FDSDQDVARADQYPNLTAAVNAAHQYSQDQVKLLGNADTD---ANPQYNIGLSERRVQYV 295

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+ +GVS DR   I+     +    +      + NRR+D+ +  
Sbjct: 296 AQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYIHR 341


>gi|295110189|emb|CBL24142.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Ruminococcus obeum A2-162]
          Length = 331

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 98/337 (29%), Gaps = 65/337 (19%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +       N    W+  Y+D M  ++  F+++  +                         
Sbjct: 2   RKKKKSEGNGFNVWR-SYSDMMAGVLLLFVLIMCVTLFQAQK------------------ 42

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              + S+ E   K ++  +       KQ    E +    +  +Q
Sbjct: 43  -----------------SYNESLQERDEKIAIQEQYTQELLDKQNAIDEKDETLQNQDEQ 85

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +     L    ++ + L      ++S    +      L ++      ++ ++  +    
Sbjct: 86  LKTQDEKLAEQQKQLEALAAKLKEQESTLNAQQTA---LDEKTAQLKDQQVQIDQIIGVK 142

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---- 255
           +  +  L  +     +  +       +++     + MFD   +         L++I    
Sbjct: 143 ADVIEALKNEFSKNNINVDIDAQTGALTL---EASVMFDYDQAELTDSGKQALEQILPIY 199

Query: 256 -----GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---------K 301
                 +        I I G+TD          N +LS  R+ +  Q L+         +
Sbjct: 200 CKVLLQDDYKDYLAEIIIDGYTDTD---GDYSYNLQLSQQRSLAVAQYLIDIQGNFLNDE 256

Query: 302 SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
                ++   ++G +          +    A+RR+++
Sbjct: 257 QSQELEKYLTVNGHSMANPVLDADGNVDKDASRRVEV 293


>gi|218676336|ref|YP_002395155.1| putative protein F-related protein [Vibrio splendidus LGP32]
 gi|218324604|emb|CAV26143.1| putative protein F-related protein [Vibrio splendidus LGP32]
          Length = 203

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+ P P     L  +G  L+   ++  +  GHTD +      R N  LS  RA   
Sbjct: 99  FKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNT---GSDRVNDPLSEQRAKEV 155

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              L  + VS  R     GF  +     +      + NRR+++++
Sbjct: 156 KARLESNYVS-SRAIYTRGFGEYVPACNNASVQGKACNRRVELML 199


>gi|300112859|ref|YP_003759434.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
 gi|299538796|gb|ADJ27113.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
          Length = 187

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F+  SS    +   +++  G  LA   ++  I  GHTD          N  L   RA 
Sbjct: 82  VYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKIILEGHTDER---GSREYNLALGERRAN 138

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           +   +++  G SE+++ ++  +   R  +    +     NRR++IL
Sbjct: 139 AVRSLILLMGASEEQV-EVVSYGEERPAVDGQDEGAWQLNRRVEIL 183


>gi|207728190|ref|YP_002256584.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum MolK2]
 gi|206591435|emb|CAQ57047.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum MolK2]
          Length = 172

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     E   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 67  KRSVYFDFDSYTVKSEYQGLLGQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171


>gi|193212308|ref|YP_001998261.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
           8327]
 gi|193085785|gb|ACF11061.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
           8327]
          Length = 108

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD   SI  PE+   L+   E +A +     +  GH D       A  N  L   R
Sbjct: 3   GDIFFDFDRSIITPESQAQLRDNAEWMAQNKSKSLVCEGHCDER---GTAEYNMALGERR 59

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           A SA + LM  GVS DR+S IS +   +       +   S NRR+  +
Sbjct: 60  AESAKESLMSLGVSGDRLSTIS-YGEEKPFAIGHDEAAWSQNRRVHFV 106


>gi|167719458|ref|ZP_02402694.1| ompA family protein [Burkholderia pseudomallei DM98]
          Length = 277

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 218

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277


>gi|167738461|ref|ZP_02411235.1| hypothetical protein Bpse14_10350 [Burkholderia pseudomallei 14]
 gi|167815654|ref|ZP_02447334.1| hypothetical protein Bpse9_10954 [Burkholderia pseudomallei 91]
 gi|254188891|ref|ZP_04895402.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|157936570|gb|EDO92240.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 277

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 218

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277


>gi|27382457|ref|NP_773986.1| hypothetical protein blr7346 [Bradyrhizobium japonicum USDA 110]
 gi|27355628|dbj|BAC52611.1| blr7346 [Bradyrhizobium japonicum USDA 110]
          Length = 316

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 8/149 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q+     +      +     K V       G+  +         FD   ++  PE+   L
Sbjct: 170 QNNQDIYAQVTVAELGAIANKMVDAAAMAKGLGETGHIALYGIYFDTDKAVLKPESRPTL 229

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           ++I ++L    +  + I GHTD+         N  LS  RA +    L KS  +++ R+ 
Sbjct: 230 EQIAKLLTSQPQLNVFIVGHTDSQ---GAYEYNLDLSKRRAEAVAAELAKSFRIAQARL- 285

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDIL 337
           + +G        ++      + NRR++++
Sbjct: 286 RTAGVGLLAPVGSNATDAGRALNRRVELV 314


>gi|313203560|ref|YP_004042217.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312442876|gb|ADQ79232.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 778

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           ++ +     P+    L  +  +L      I +  +TD+      ++ N  LS  RA S  
Sbjct: 631 YNFNKWDIRPDATPTLDSLITLLKIYPIKIELGSYTDSR---GTSQYNDTLSQKRAESVV 687

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
             L+K G+  +R+  + G     +          S+  +  NRR ++ V
Sbjct: 688 AYLVKHGIDRNRLIAV-GHGERNILNRCIDGVSCSENEHQVNRRTEVKV 735


>gi|332704092|ref|ZP_08424180.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332554241|gb|EGJ51285.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 253

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 90/252 (35%), Gaps = 11/252 (4%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
            ++D +      +   +                 ++               + +  +   
Sbjct: 3   KQLDETPPVPPRRTQEEAPEEGAPGWMTTFADMMSLLLCFFILLLSFSSMDVAKYEKVLG 62

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKG 214
            L  +  ++++ +  E    P +S+E    +   +K +  L   +   +   V    +  
Sbjct: 63  SLKYAFGVQRTPSDSEFASPPGVSQELSENLSADQKDILGLVLVLRKLVHQDVDVKDLAV 122

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           V  +     + +         MFD  S+   PE + ++ K   +L      + IRGHTD+
Sbjct: 123 VSSDRNGALLRVQ-----AGAMFDPGSAALKPEAVKIIDKAVTILKERNFSVVIRGHTDS 177

Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA-- 330
               +     NW LS  RA ++ +++++ G +  +RI  I G+A  R  + +    +   
Sbjct: 178 HIVHSAQFPSNWELSAARAAASARLVIERGAIDTNRIKAI-GYADSRPLVPNSTEENRAF 236

Query: 331 NRRIDILVEDRQ 342
           NRR++       
Sbjct: 237 NRRVEFYFHKPN 248



 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           ++   +        W   +AD M++L+ FF+++   ++ D    + +            T
Sbjct: 14  RRTQEEAPEEGAPGWMTTFADMMSLLLCFFILLLSFSSMDVAKYEKVLGSLKYAFGVQRT 73

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDE 104
            S   F   +PP  S +   +LS D+
Sbjct: 74  PSDSEFA--SPPGVSQELSENLSADQ 97


>gi|302062033|ref|ZP_07253574.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
          Length = 380

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      SS    D          +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K          K    +   +   + +  +      ++         
Sbjct: 80  WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 283


>gi|296108643|ref|YP_003620344.1| hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
           Alcoy]
 gi|295650545|gb|ADG26392.1| Hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 294

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +        L++I + +      +VI + GH D S  +     N  +S  RA S
Sbjct: 190 FGVDSKLLSDADKAQLRRIAQYVDADVQIDVIKVIGHADDSGRKG---YNNAISQYRAES 246

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294


>gi|254428548|ref|ZP_05042255.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
           DG881]
 gi|196194717|gb|EDX89676.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
           DG881]
          Length = 190

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F   S+         L+     L ++    I + GH D          N  LS 
Sbjct: 79  DSRVIYFAFDSNTVPAAAFETLRAHATYLKNNANAKIRLEGHADER---GTREYNVALSE 135

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            R+ +  + L   GV+  ++  +S +   +       +   + NRR++I
Sbjct: 136 RRSKAVEKFLRVQGVASSQLEIVS-YGEEKPAAFGHGEMDWAKNRRVEI 183


>gi|28871259|ref|NP_793878.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28854509|gb|AAO57573.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 381

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      SS    D          +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K          K    +   +   + +  +      ++         
Sbjct: 80  WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 283


>gi|300704849|ref|YP_003746452.1| peptidoglycaN-associated lipoprotein, protein pal, component of
           tol-pal system [Ralstonia solanacearum CFBP2957]
 gi|299072513|emb|CBJ43863.1| Peptidoglycan-associated lipoprotein, protein pal, component of
           tol-pal system [Ralstonia solanacearum CFBP2957]
          Length = 172

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     E   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 67  KRSVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171


>gi|167894145|ref|ZP_02481547.1| ompA family protein [Burkholderia pseudomallei 7894]
          Length = 277

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 218

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277


>gi|153830883|ref|ZP_01983550.1| putative outer membrane protein [Vibrio cholerae 623-39]
 gi|148873634|gb|EDL71769.1| putative outer membrane protein [Vibrio cholerae 623-39]
          Length = 212

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   LQD  +        L  D      +        + S   Q+   +F   SS   
Sbjct: 42  ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P  +  ++++ E L       I ++G+         A  N  LS  R+ +    L++ GV
Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +R++ I G+    L++    D  ++ NRR+   V   +G
Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198


>gi|146279022|ref|YP_001169181.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557263|gb|ABP71876.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 316

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+     T   L ++ E L        +  GHTDA         N  LS  RA S 
Sbjct: 212 FASGSADLEDRTYPALAELAEWLKQDPARQVVIVGHTDA---SGGLEGNVSLSRARAASV 268

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
            Q L+ + GV + ++S   G  +   + ++        NRR+++++  
Sbjct: 269 RQRLVSRHGVPDAQVSA-EGVGYLAPRASNRTEEGRSRNRRVEVMLLA 315


>gi|83746170|ref|ZP_00943224.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
 gi|207744075|ref|YP_002260467.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum IPO1609]
 gi|83727136|gb|EAP74260.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
 gi|206595479|emb|CAQ62406.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
           solanacearum IPO1609]
          Length = 172

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     E   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 67  KRSVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171


>gi|160897524|ref|YP_001563106.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363108|gb|ABX34721.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 174

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  +         +++   + L  +      +RGHTD          N  L   R
Sbjct: 69  HIVYFDFDAYTIRNSDRAIVESHAQWLRSNPGRSVMLRGHTDRR---GGIEYNLALGQKR 125

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           A +    L   GV+  R+  +S +   RL        +   NRR++ 
Sbjct: 126 ADAVRNSLQLLGVNPARVESVS-YGKERLADEGTSEEAHQRNRRVEF 171


>gi|940548|emb|CAA81039.1| Outer membrane or porin protein [Leptothrix discophora]
          Length = 84

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            GHTD+         N +LS+ RA +  + L+  G+ ++R+         +    +    
Sbjct: 9   VGHTDSD---GSDALNDKLSVSRAEAVKKYLVSKGIEQNRVYT-EAKGEKQPVADNSTKE 64

Query: 329 S--ANRRIDI 336
               NRR++I
Sbjct: 65  GKQKNRRVEI 74


>gi|148261844|ref|YP_001235971.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146403525|gb|ABQ32052.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
          Length = 203

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+   P+ +  L ++G  L   T       + GHTD +     A  N  LS  RA 
Sbjct: 97  FATGSAKLTPQAVTELDRLGRALTDKTLAAYHFRVVGHTDTT---GAASTNLALSQARAA 153

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +    LM    +   R+   +G     L + + P   N ANRR+ I+
Sbjct: 154 AVKTYLMSKFDIPATRLQA-TGVGEADLLVPTGPNVANRANRRVQII 199


>gi|54298967|ref|YP_125336.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
 gi|53752752|emb|CAH14187.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
          Length = 294

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +        LQ+I + +      +VI I GH D S  +     N  +S  RA S
Sbjct: 190 FGVDSKLLSDADKAQLQRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294


>gi|266621919|ref|ZP_06114854.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
           13479]
 gi|288866392|gb|EFC98690.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
           13479]
          Length = 283

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 14/217 (6%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           NI  L     +   +  +   ++             S                     R 
Sbjct: 38  NISKLEEIAAAMQRQLGIESTNDLEDVPQDLKYPSISEGAGAPEGEGSQFNTGTGGGARS 97

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                +A       S    +N+   V        I       +N  +F   S++    + 
Sbjct: 98  ASSLAMADMAKDIQSYFQMENLDAVVSDSENAVYIRF-----KNDLLFAPDSAVLQENSK 152

Query: 250 VVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
            +L  +G +L    + I    I GHT  +   N   ++  LS +RA +    L    G+ 
Sbjct: 153 SMLDALGIMLKDRQDEIMAIYINGHT--AQAANSLINDRLLSSERADNVAIYLEDHVGLE 210

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             ++    G+  +     +        NRR+D+++  
Sbjct: 211 PKKLI-CRGYGKYYPIADNSTKEGRELNRRVDMIILG 246



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 9/217 (4%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +KK+            W   YAD +T+++ FF++++ I+  +    + I           
Sbjct: 1   MKKRR----EEGGGQEWLNTYADMITLVLTFFVLLYSISNVNISKLEEIAAAMQ-----R 51

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
               +   D ++ P+      I         + S          +        ++     
Sbjct: 52  QLGIESTNDLEDVPQDLKYPSISEGAGAPEGEGSQFNTGTGGGARSASSLAMADMAKDIQ 111

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S       +++  DSE    +    DL  + +            + +  M + ++ + +A
Sbjct: 112 SYFQMENLDAVVSDSENAVYIRFKNDLLFAPDSAVLQENSKSMLDALGIMLKDRQDEIMA 171

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             I+   +      I   +L       + I + D   
Sbjct: 172 IYINGHTAQAANSLINDRLLSSERADNVAIYLEDHVG 208


>gi|188997203|ref|YP_001931454.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932270|gb|ACD66900.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 260

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 16/161 (9%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            KI     K ++    K     +     ++       +     + +          F  +
Sbjct: 108 PKIPDAIEKAKIAQNKKPEKLDIGAKEKESPKTYKSTDAITQPVRVH---------FYLN 158

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           SS    E +  L  + + L    +  + I+G+TD        + N +L+L RA +  Q L
Sbjct: 159 SSKIKKEYLPYLNIVAKYLKTHPDVKVKIKGYTDNI---GSKKYNDKLALKRAKTVKQYL 215

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +K GVS +RI  I G       ++++       NRR +  +
Sbjct: 216 VKLGVSPNRIM-IDGVGKSEYIVSNNNELDRFTNRRAEFYI 255


>gi|114046783|ref|YP_737333.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113888225|gb|ABI42276.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 191

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L A++   +++ GHTD          N++LSL RA 
Sbjct: 85  VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  ++L++  G + +R   + G         +        NRR+  +V +
Sbjct: 142 NVKRILVEDYGFNPNRF-TVIGKGISEPVADNHSSEGRRLNRRVQFIVNN 190


>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 372

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLSIQVNGYTDRI---GKEASNLKLSQ 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364

Query: 339 EDRQ 342
           +  +
Sbjct: 365 QGSK 368


>gi|113969550|ref|YP_733343.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113884234|gb|ABI38286.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 191

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L A++   +++ GHTD          N++LSL RA 
Sbjct: 85  VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  ++L++  G + +R   + G         +        NRR+  +V +
Sbjct: 142 NVKRILVEDYGFNPNRF-TVIGKGISEPVADNHSSEGRRLNRRVQFIVNN 190


>gi|114332455|ref|YP_748677.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
 gi|114309469|gb|ABI60712.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
          Length = 231

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++  P  +  L      L      + I  G+TD          N +LS+ RA
Sbjct: 111 DALFDFDKAVLKPAGMQALDDFSRNLEGVNYDLIIAVGYTDRI---GSEAYNKKLSVRRA 167

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD---PMNSA---N-----RRIDILVEDR 341
            +    L+  G+  DRI    G                 +    N     RR++I V   
Sbjct: 168 EAVKNYLVSKGIGADRIFT-DGKGKANPVTGDSCQGTKATRTLINCLAPDRRVEIEVAGT 226

Query: 342 Q 342
           +
Sbjct: 227 R 227


>gi|297538999|ref|YP_003674768.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
 gi|297258346|gb|ADI30191.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
          Length = 180

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 13/158 (8%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSS 242
           K+   ++AK   ++      ++    V        I ++ +   N  +      FD    
Sbjct: 23  KEAPSNVAKMPVASPKQAEPESPPPAVTSSAPENKIEVNPLTDPNNILSKRSVYFDFDKY 82

Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  PE   +L+   + L    E  I I G+ D          N  L   RA +   +   
Sbjct: 83  VVKPEYRTLLEAHAKYLLSHPEKSIRIEGNADDR---GSREYNLALGQKRAVAVKSLANL 139

Query: 302 SGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            GV + +I  IS +   + K     +   + NRR DI+
Sbjct: 140 LGVPDKQIETIS-YGEEKPKATGEDETSWAENRRADIV 176


>gi|167586522|ref|ZP_02378910.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
          Length = 223

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKATLKPLGKQKLDDLAGKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  G+  ++I    G             N  N           RR+++ V 
Sbjct: 154 RAQAVKSYLVSKGIPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 210

Query: 340 DRQ 342
             Q
Sbjct: 211 GTQ 213


>gi|73539729|ref|YP_294249.1| OmpA [Ralstonia eutropha JMP134]
 gi|72117142|gb|AAZ59405.1| OmpA [Ralstonia eutropha JMP134]
          Length = 591

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            ++  +      +   S    P++    ++  E L      I + GHTD +     +R N
Sbjct: 181 RVAFTEIAQQYAYPVQSRQLGPQSTPQDRQAVEGLKSRR--ILLIGHTDDT---GSSRLN 235

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
             LS  RA +   +   +GV+E ++    G         +  +   + NRR++I+
Sbjct: 236 ADLSEQRARAVAALFRDAGVAESQLY-YQGAGETMPLADNRDEAGRAKNRRVEIV 289


>gi|34556944|ref|NP_906759.1| lipoprotein precursor [Wolinella succinogenes DSM 1740]
 gi|34482659|emb|CAE09659.1| LIPOPROTEIN PRECURSOR [Wolinella succinogenes]
          Length = 170

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 9/121 (7%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNI 280
           ++  +  Q  +  FD        +   V+    +VL         + I G+TD       
Sbjct: 53  LIRELESQLKSVYFDFDKFNIRADMQPVVDGDAKVLTSAKAKGLTVKIEGNTDEW---GT 109

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
              N+ L L RA +    L+  GV + +   IS +   +           + NRR+D  +
Sbjct: 110 DEYNYALGLKRAVAVRDALVAKGVDQSKTMLIS-YGESKPVCQEKSKECWAKNRRVDFKL 168

Query: 339 E 339
            
Sbjct: 169 L 169


>gi|313203569|ref|YP_004042226.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312442885|gb|ADQ79241.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 231

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  + S     +   L K  ++L  +  +  +I GHTD          N +LS +
Sbjct: 110 DSGILFQTNKSALNTASKDALTKFAKILVANPTMDITIMGHTDNQ---GSLDVNQKLSQE 166

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           RA S    L    V+  +  +I G         +      +ANRR+++ +   +
Sbjct: 167 RAQSVANFLQTQSVTATQFKEIIGKNFAEPVADNKTAAGRAANRRVEVYMYASE 220


>gi|188025753|ref|ZP_02959682.2| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
 gi|188020355|gb|EDU58395.1| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
          Length = 175

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             N   F        PE   +L      L ++    + + GH D          N  L  
Sbjct: 69  NNNIVYFGFDKYNVSPEYADMLDAHAAFLRNNPSVKVVVEGHADER---GTPEYNIALGE 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +    L   GV+ D++S +S +   +  +        + NRR  I
Sbjct: 126 RRANAVKMYLQSKGVAGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 173


>gi|161525435|ref|YP_001580447.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|171316170|ref|ZP_02905394.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|189349827|ref|YP_001945455.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
 gi|221201252|ref|ZP_03574292.1| OmpA family protein [Burkholderia multivorans CGD2M]
 gi|221206294|ref|ZP_03579307.1| OmpA family protein [Burkholderia multivorans CGD2]
 gi|221213575|ref|ZP_03586549.1| OmpA family protein [Burkholderia multivorans CGD1]
 gi|254252935|ref|ZP_04946253.1| OmpA/MotB [Burkholderia dolosa AUO158]
 gi|124895544|gb|EAY69424.1| OmpA/MotB [Burkholderia dolosa AUO158]
 gi|160342864|gb|ABX15950.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
 gi|171098679|gb|EDT43474.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|189333849|dbj|BAG42919.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
 gi|221166364|gb|EED98836.1| OmpA family protein [Burkholderia multivorans CGD1]
 gi|221173603|gb|EEE06037.1| OmpA family protein [Burkholderia multivorans CGD2]
 gi|221179102|gb|EEE11509.1| OmpA family protein [Burkholderia multivorans CGD2M]
          Length = 222

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 96  QADALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV  ++I    G             N  N           RR+++ V 
Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209

Query: 340 DRQ 342
             Q
Sbjct: 210 GTQ 212


>gi|127512450|ref|YP_001093647.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126637745|gb|ABO23388.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 286

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 14/235 (5%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           ++   K +    +   ++   + +     S+      G      TDL             
Sbjct: 54  TSRAGKDHDLNFSLDMWVKPDEVTSAKLMSMAPAWRPGVVSRPITDLTYQKYFSGEVPKK 113

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTRTGILISIIDQRNTP 235
                     +  +     A   + +    V  +       +   ++ +   +    +  
Sbjct: 114 AAWSMLNELERGMQPTFYYADWYNRSSKVAVGLSAANFGRRYAEFKSCLANLLPYSFDDI 173

Query: 236 MF-----DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288
            F     +   S     +   + K+ E L++  EV  + I  +TD+         N ++S
Sbjct: 174 AFTVLTYEFGGSELTRYSKAQIAKVQEYLSYDPEVELVLIDAYTDSF---GGRSVNKKVS 230

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             RA S  Q+ + +G+  +RI    G    R   ++D     + NRR+ I +   
Sbjct: 231 EKRANSVKQLFLSAGIPNERIHTY-GHGERRHVASNDTIDERARNRRVVIRLSKP 284


>gi|115350969|ref|YP_772808.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|170698423|ref|ZP_02889496.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|172059974|ref|YP_001807626.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|115280957|gb|ABI86474.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
 gi|170136676|gb|EDT04931.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|171992491|gb|ACB63410.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 222

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 96  QADALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV  ++I    G             N  N           RR+++ V 
Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209

Query: 340 DRQ 342
             Q
Sbjct: 210 GTQ 212


>gi|220935396|ref|YP_002514295.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996706|gb|ACL73308.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 181

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S   PE   V+   G  LA +  +     GHTD          N  L   RA + 
Sbjct: 76  FEFDRSDIKPEFEEVIIAHGRFLAQNPNMQVRAEGHTDER---GTREYNLGLGERRAQAV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            ++LM  G   D+I ++  +           +   + NRR++++
Sbjct: 133 QRMLMLQGARADQI-QVVSYGEEMPVAFGRDEESWAQNRRVELV 175


>gi|172063966|ref|YP_001811617.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171996483|gb|ACB67401.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
          Length = 170

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
                +FD       P+   ++++IG  L  +    + + G++D          +  LS 
Sbjct: 61  SSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTVAYDRELSR 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
            RA      L+  G+   R+  + G         +      + NRR  I+V  R
Sbjct: 118 RRAEVVAIELVDVGLDGKRV-AVIGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170


>gi|163738350|ref|ZP_02145765.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|161388271|gb|EDQ12625.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 169

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   P    VLQ     L  + + + +I GH D          N  L   R
Sbjct: 59  DRVLFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQ---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A + L+  GV+ +R+ ++  F   R     +++   + NRR
Sbjct: 116 ANAAREYLLSQGVAGNRL-QVVSFGKERPLEICSNEACYTKNRR 158


>gi|163742233|ref|ZP_02149621.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
           2.10]
 gi|161384563|gb|EDQ08944.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
           2.10]
          Length = 169

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   P    VLQ     L  + + + +I GH D          N  L   R
Sbjct: 59  DRVLFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQ---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A +A + L+  GV+ +R+ ++  F   R     +++   + NRR
Sbjct: 116 ANAAREYLLSQGVAGNRL-QVVSFGKERPLEICSNEACYTKNRR 158


>gi|134095585|ref|YP_001100660.1| putative peptidoglycan-associated lipoprotein (pal) [Herminiimonas
           arsenicoxydans]
 gi|133739488|emb|CAL62539.1| putative peptidoglycan-associated lipoprotein precursor pal-like
           [Herminiimonas arsenicoxydans]
          Length = 167

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S +  PE   V+    + L  +     I +G+TD       A  N  L   
Sbjct: 62  KRSVYFDYDSYVVKPEYQQVVANHAKYLQSNRTRKIIIQGNTDER---GGAEYNLALGQK 118

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV E ++  +S     + K   + +   + NRR DI+
Sbjct: 119 RAEAVRKSLSLLGVPESQMEAVS-LGKEKPKALGSDEAAWAENRRADIV 166


>gi|85860625|ref|YP_462827.1| outer membrane protein [Syntrophus aciditrophicus SB]
 gi|85723716|gb|ABC78659.1| outer membrane protein [Syntrophus aciditrophicus SB]
          Length = 204

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 9/176 (5%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
            + +  +  ++ +     +   +   +A+      + +   +++           +L ++
Sbjct: 33  PDPDGKVGEITVQNKGGAQIMTQAGQMAEVHDEATAPVSPASVMDDKEIHRIFGDVLAAL 92

Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285
            ++       F  +S      ++ VL    E ++    E IS+ GHTD          N+
Sbjct: 93  PEKPLTFILYFKTNSFELNIPSLKVLNSAHEAISSRQSEDISVIGHTDRV---GTDEKNY 149

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
            LS  RA S  + L+  GV  D I ++         + +        NRR++++V 
Sbjct: 150 ILSRKRALSVKKYLVVKGVHPDAI-ELDYHGEANPLVKTAEGVAEPRNRRVEVIVR 204


>gi|254455867|ref|ZP_05069296.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082869|gb|EDZ60295.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 165

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
            +   F  + SI    +   L+     L  ++ +  +  GH D          N  L   
Sbjct: 58  PDRVFFATNESILTTASRETLRAQAAWLRKNSSINIVLEGHADER---GTREYNLALGER 114

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
           RA SA   LM  G+S DRI  +  +   R           S NRR
Sbjct: 115 RANSAKDYLMTYGISSDRI-SVLSYGKERPVDGGSSPLAWSKNRR 158


>gi|197337668|ref|YP_002157566.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
 gi|197314920|gb|ACH64369.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
          Length = 341

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 8/117 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283
           +I+  ++     F  +SS     ++  LQK+  +L    +   I  G+TD+         
Sbjct: 219 IITTNEESYVTYFSFASSKVNTGSLE-LQKVLHILKKYPQSNLILTGNTDSI---GSYAS 274

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N RLS  RA S  +     G+S  RI  +          ++        N R+D+ +
Sbjct: 275 NQRLSQKRANSVARFFTDRGISISRI-TVRADGETNPVASNITAEGRSQNLRVDMNI 330


>gi|126733987|ref|ZP_01749734.1| OmpA family domain protein [Roseobacter sp. CCS2]
 gi|126716853|gb|EBA13717.1| OmpA family domain protein [Roseobacter sp. CCS2]
          Length = 312

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 8/124 (6%)

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
            + +      +   F+  S+         LQ + + LA + +  +++ GHTD+       
Sbjct: 192 QLEVVGRSVLSDLSFETGSAQLAAGNYASLQALADYLAGAPQLRVALVGHTDS---SGSL 248

Query: 282 RDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             N  LS  RA S  + L+   G S  +I    G  +      +        NRR++++V
Sbjct: 249 EANIALSKRRAASVLERLVSAYGTSRGQIEA-EGMGYLAPIAPNLTEEGREANRRVEVIV 307

Query: 339 EDRQ 342
              Q
Sbjct: 308 TSTQ 311


>gi|307611849|emb|CBX01563.1| hypothetical protein LPW_32501 [Legionella pneumophila 130b]
          Length = 294

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +      V L++I + +      +VI I GH D S  +     N  +S  RA S
Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294


>gi|260890421|ref|ZP_05901684.1| OmpA family protein [Leptotrichia hofstadii F0254]
 gi|260860041|gb|EEX74541.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 180

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L+ I  +L        + I GHTD++      + N +LSL+RA +
Sbjct: 64  FKVDGEKMNESESYDLKYIANMLNTHIEKGSLEIIGHTDST---GSKKHNLKLSLERAIN 120

Query: 295 AYQVLMKSGVSEDRISKIS--GFAHHRLKIASDPMNSA--NRRIDILVED 340
           A ++L + G+   R S +   G         ++ +     NRRI+I++ D
Sbjct: 121 AAKLLREYGLD-KRFSVVKIIGKGGEEPMDTNETVEGRYNNRRIEIILND 169


>gi|54295802|ref|YP_128217.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
 gi|53755634|emb|CAH17136.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
          Length = 294

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +      V L++I + +      +VI I GH D S  +     N  +S  RA S
Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294


>gi|114562640|ref|YP_750153.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114333933|gb|ABI71315.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           ++N   FD   S    E   ++Q  G  L     V   I GH D          N  L  
Sbjct: 72  RQNIIYFDFDRSEVQSENAEIIQAHGNYLVEHPNVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
            RA +  + L   GV   ++S +S +   +      +D   + NRR
Sbjct: 129 RRAKAIAKYLQGMGVQPSQMSIVS-YGEEKPLDYSRNDTGFAKNRR 173


>gi|303249271|ref|ZP_07335504.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489310|gb|EFL49266.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
          Length = 264

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           ++   N+ MF   S+   P    VL  + ++L      +++RG  D           W L
Sbjct: 137 MMQVNNSVMFRPGSAELTPTAQKVLDGVAKILRDFKINLTVRGFADDDEKGGPYPSKWEL 196

Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           S  RA +A + L + +G+S  R+  + G A  +  +        + NRRI+  
Sbjct: 197 SAARAAAATRYLAETTGISTTRLRAV-GLADSQPLVPPTSPANKARNRRIEFF 248



 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%)

Query: 7  KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66
          KN +  + +II ++       ++ GSWK+ YADF+T LMAFFL++W++ +    TK+ + 
Sbjct: 3  KNSDKGKTVIIYRESEGGHGGHHGGSWKVAYADFVTALMAFFLLLWLVVSLKPKTKQELS 62

Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
            F           + +          +  
Sbjct: 63 LVFQDKNVPSKEKVQNLEKVPTFISPDAIK 92


>gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida]
 gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida]
          Length = 358

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRRVEIPVKGNK 358


>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
           serotype A2 str. OVINE]
          Length = 372

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364

Query: 339 EDRQ 342
           +  +
Sbjct: 365 QGSK 368


>gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
 gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
          Length = 230

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 107 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 163

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 164 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 222

Query: 339 EDRQ 342
           +  +
Sbjct: 223 QGSK 226


>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 372

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364

Query: 339 EDRQ 342
           +  +
Sbjct: 365 QGSK 368


>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 372

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364

Query: 339 EDRQ 342
           +  +
Sbjct: 365 QGSK 368


>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 367

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
 gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 374

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 251 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 307

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 308 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 366

Query: 339 EDRQ 342
           +  +
Sbjct: 367 QGSK 370


>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 367

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359

Query: 339 EDRQ 342
           +  +
Sbjct: 360 QGSK 363


>gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 373

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 250 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 306

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 307 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 365

Query: 339 EDRQ 342
           +  +
Sbjct: 366 QGSK 369


>gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 378

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 312 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370

Query: 339 EDRQ 342
           +  +
Sbjct: 371 QGSK 374


>gi|30314422|gb|AAP15420.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
 gi|30314432|gb|AAP15425.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
          Length = 149

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     +       +   + NRR D++
Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 146


>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
 gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
 gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
          Length = 378

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +++       I + G+TD          N +LS 
Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338
            RA +    ++  G +   ++ + G+           D +            +RR++I V
Sbjct: 312 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370

Query: 339 EDRQ 342
           +  +
Sbjct: 371 QGSK 374


>gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 364

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L  +   + +   S   I + G+TD          N +LS 
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    ++  G     ++ + G+           D +            +RR+++ V
Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGTK 360


>gi|218515615|ref|ZP_03512455.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
          Length = 246

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+   +LQK+  V+       I I GHTDA      AR N  LS+ RA   
Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +   +   +  +R+  + G           P    NRR++ 
Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242


>gi|167845593|ref|ZP_02471101.1| ompA family protein [Burkholderia pseudomallei B7210]
          Length = 277

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 218

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277


>gi|332291918|ref|YP_004430527.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170004|gb|AEE19259.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 306

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 73/274 (26%), Gaps = 12/274 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
           P       A+   F+ + P  + +    D       + + +    G         +    
Sbjct: 38  PAVATPEVATSMAFNLKGPDGKFAFTSNDNFNFNTSSFSILPPISGEVTDGVNQFKTYFE 97

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
                +              +                N   +  +P  S       + + 
Sbjct: 98  TAGNEDKMIDITGYYDSGEKNTSAFADLGLARSNSVKNYFVDQGIP--SSRINTYGELRA 155

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTR-TGILISIIDQRNTPMFDKS--SSIPLPE 247
            +          +   + +     +    T    I  S+        F+    S     +
Sbjct: 156 SIVSDGNVYKGPIEYRIFNQANGDLDATNTALQDIENSLRADPLVLYFNYGEASVTLSEK 215

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             + +  I   L       I++ GHTD+         N RL L+RA  A   L  +G+ E
Sbjct: 216 KRLQIGDISCYLDKKEGATITVEGHTDSQ---GSLTTNDRLGLERAEFAKAYLANNGIPE 272

Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
            +I  +S          +D       NRR  I +
Sbjct: 273 SKIKTVS-KGERSPIETNDTEEGHNKNRRAVITL 305


>gi|315122875|ref|YP_004063364.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496277|gb|ADR52876.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 152

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   FD +S    PE I VL  +G  L  +     I GHTD          +  L L RA
Sbjct: 42  DRIFFDINSYSIRPEDIQVLSSLGSWLEKNGCDFIIEGHTDEQ---GTRNSSLVLGLRRA 98

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           ++ +   +  G++  R+  I+ +      +    +   S NRR  I+++ 
Sbjct: 99  HTVFDYFLARGINSSRMK-ITSYGKEIPAVLGYDESAYSKNRRTVIVLQK 147


>gi|254786950|ref|YP_003074379.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
 gi|237683752|gb|ACR11016.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
          Length = 311

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 6/79 (7%)

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I  H  A        DN  LS  RA      L+  G+ E ++  +          +
Sbjct: 215 NQFIIDAHASAE---GTRIDNLELSKTRADLVRDYLVGHGIPESQLV-VRWHGERYPVAS 270

Query: 324 SD--PMNSANRRIDILVED 340
           +D     + NRR+ + +E 
Sbjct: 271 NDSSSGRAKNRRVTVRMEK 289


>gi|163800953|ref|ZP_02194853.1| hypothetical protein 1103602000593_AND4_01783 [Vibrio sp. AND4]
 gi|159175302|gb|EDP60099.1| hypothetical protein AND4_01783 [Vibrio sp. AND4]
          Length = 252

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 8/224 (3%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             + L        + Q ++   ++L ++  +           +  N+        L  + 
Sbjct: 20  PDEPLGPEHGLRFDWQLTKLHLDALIQEGARWCFPAAVVQALQKQNRIARELEGGLMLDA 79

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSS 241
              +  ++R  +L ++    +         + +        I+ +I D  N    F   S
Sbjct: 80  ANDIVIQRRRLNLLEQQLDYVLSQTTCKPPQDIEAFRNDLSIVANIYDLLNVDNQFAIDS 139

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P+ +  L +   +L       + + GH DA+        N +L+ +RA    + L 
Sbjct: 140 AEINPKYMGHLAEAAYILRDHPYLSLVVTGHADAT---GTPEYNSQLAQNRAEQVKRYLT 196

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             G++ DR+                       NRR+ I V   Q
Sbjct: 197 VFGITSDRVQT-KSVGESLPLYEGQTPGVRLTNRRVSIEVLSGQ 239


>gi|85375617|ref|YP_459679.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
 gi|84788700|gb|ABC64882.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
          Length = 367

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   PE   +L       A+     + + GH D          N  LS  
Sbjct: 256 PYIVFFNWDESNITPEAATILNNAVTAYANCGTASVMLAGHADR---SGPQTYNVGLSQR 312

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S  + L   G+ + RIS    F   + ++ +        NRR++I 
Sbjct: 313 RNASVREYLNGRGIPDARISS-EAFGESQPRVPTADGVRELQNRRVEIT 360


>gi|198282220|ref|YP_002218541.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218667535|ref|YP_002424585.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246741|gb|ACH82334.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218519748|gb|ACK80334.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 192

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     +   +  +  + +       + + G+TD          N  L   RA + 
Sbjct: 86  FAFNSGAMDAQAQQIAAQNAQFMVAHPHVQVRLEGNTDDR---GTQEYNLALGEQRAETV 142

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDIL 337
            Q L   GVS  RIS +S F         +D    + NRR+D +
Sbjct: 143 KQFLQSQGVSAARISTVS-FGKDNPLCTTNDSACWARNRRVDFV 185


>gi|89890263|ref|ZP_01201773.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
 gi|89517178|gb|EAS19835.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
          Length = 571

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              ++D        +    L ++ + +  +    I I  HTD+         N  LS +R
Sbjct: 458 KNILYDLDKYYIRADAEPELNRLVQFMKDNPGVRIEISSHTDSR---GSNAYNKTLSQNR 514

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           A +A   +   G+  +R+  I G+   RL          S   +  NRR ++ V
Sbjct: 515 ASAARDYIASQGIDANRVVGI-GYGETRLLNRCADGIECSAAEHQINRRTEMKV 567


>gi|283850887|ref|ZP_06368173.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
 gi|283573810|gb|EFC21784.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
          Length = 171

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   PE   +L +  +++    ++   + G+ D       A  N  L   RA +A
Sbjct: 69  FAFDSSNLTPEARQILTRKADIMKQYPQIKVIVEGNCDQR---GTAEYNLALGERRAQAA 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            Q L   G+  DR+S +S +   R           + NRR + 
Sbjct: 126 AQYLSNLGIPADRLSTVS-YGKERPLDPGTGEAAYAKNRRDEF 167


>gi|56475929|ref|YP_157518.1| outer membrane protein [Aromatoleum aromaticum EbN1]
 gi|56311972|emb|CAI06617.1| Bacterial outer membrane protein [Aromatoleum aromaticum EbN1]
          Length = 238

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 16/119 (13%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L ++ E        + +  GHTD          N +LS  RA +
Sbjct: 124 LFDFDKAVLKPEGRSKLDQLAEQAKSVKLEVILAVGHTDRL---GSDVYNQKLSERRANA 180

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342
               L+  GV  +RI    G    +    +                 +RR+++ V   +
Sbjct: 181 VKTYLVGKGVEANRIYT-EGKGERQPVTGTTCSDKLGRKALIECLQPDRRVEVEVIGTK 238


>gi|86134634|ref|ZP_01053216.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85821497|gb|EAQ42644.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 527

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              K+      K+++S+    +  ++    +       +   ++       FD + +   
Sbjct: 363 EVSKENFHQAFKEVASSKENFIEVDLELEPIENNHFITVRDQVMLNIPPIYFDLAKATIK 422

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +   LQ + +++    ++I  IR H+D+         N RLS  RA +    ++  G+
Sbjct: 423 KTSEQELQMVVDLMNRYPKIIVQIRAHSDSR---GNDSYNLRLSDRRAKATVNWILDKGI 479

Query: 305 SEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVEDR 341
           +++RI  I GF    L    ++     +  +  NRR + ++ + 
Sbjct: 480 AKNRIFGI-GFGEEDLVNECSNGVQCSEEKHLENRRTEFVILNP 522


>gi|330937557|gb|EGH41498.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 221

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 99  FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 155

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                   G+ E +I  +             ++   + NRR+++ +E 
Sbjct: 156 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 202


>gi|224458593|gb|ACN43175.1| major outer membrane protein OmpAI [Aeromonas veronii]
          Length = 327

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 26/126 (20%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE +  L  + + +           + G+TD          N +LS 
Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQVVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 265

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334
            RA +    L+  G+   ++  I G                N               RR+
Sbjct: 266 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 320

Query: 335 DILVED 340
           ++ V  
Sbjct: 321 EVRVTG 326


>gi|148361303|ref|YP_001252510.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
 gi|148283076|gb|ABQ57164.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
          Length = 294

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +      V L++I + +      + I I GH D S  +     N  +S  RA S
Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKG---YNNAISQYRAES 246

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294


>gi|148979688|ref|ZP_01815660.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
 gi|145961665|gb|EDK26963.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
          Length = 202

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 10/165 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISIIDQRN 233
               +E+ +     +++ DL       +              L +    G +I   + R 
Sbjct: 19  SSQQEEEYIETPEAEQISDLQDDDKDGVVNARDTCPATPPASLVDNEGCGEIIRAEEVRQ 78

Query: 234 -TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F   S    P     +  + E L       I I+G+         +  N  LS  R
Sbjct: 79  LNILFANDSYEVNPIFSDQITTMAEFLETYQSASIEIQGYASKV---GSSEYNLELSKKR 135

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334
           A++    L+ +G+   R+ ++ G+   RL+   D    ++ NRR+
Sbjct: 136 AHNVEDELLYNGIDSSRV-RVVGYGEDRLESDGDDATSHALNRRV 179


>gi|77920564|ref|YP_358379.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
           2380]
 gi|77546647|gb|ABA90209.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
           2380]
          Length = 190

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 7/141 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    +G                +  +   +       F+       PE   +L    E 
Sbjct: 50  VEEMGAGETGIGESMIGEESMDDSMSMPQTVASLERIYFNFDRYDLSPEAQAILINNAEY 109

Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L  + +    I G+ D          N  L   RA +A + L   GV+ DR+  +  +  
Sbjct: 110 LKANPDQKVRIEGYCDER---GSDEYNLALGERRALAAQKYLESLGVAGDRL-SVISYGE 165

Query: 318 HRLKIA--SDPMNSANRRIDI 336
                   ++   + NRR + 
Sbjct: 166 EMPLDPAQNEDAYAMNRRAEF 186


>gi|52843156|ref|YP_096955.1| hypothetical protein lpg2962 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52630267|gb|AAU29008.1| sodium-type flagellar protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 299

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S +      V L++I + +      + I I GH D S  +     N  +S  RA S
Sbjct: 195 FGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKG---YNNAISQYRAES 251

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               L++ GV + ++  I+     +    +D     +ANRR+ + +  +
Sbjct: 252 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 299


>gi|120598160|ref|YP_962734.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|120558253|gb|ABM24180.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
          Length = 196

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L  + +V  +  GHTD          N++LSL RA 
Sbjct: 90  VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALLLVGHTD---IVGTPEFNYQLSLQRAE 146

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  ++L++  G + +R   I G         +        NRR+  +V ++
Sbjct: 147 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196


>gi|15641629|ref|NP_231261.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121591817|ref|ZP_01679004.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
 gi|121730010|ref|ZP_01682424.1| outer membrane protein, putative [Vibrio cholerae V52]
 gi|147673877|ref|YP_001217173.1| putative outer membrane protein [Vibrio cholerae O395]
 gi|153214683|ref|ZP_01949543.1| outer membrane protein, putative [Vibrio cholerae 1587]
 gi|153802238|ref|ZP_01956824.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
 gi|153819367|ref|ZP_01972034.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
 gi|153822202|ref|ZP_01974869.1| outer membrane protein, putative [Vibrio cholerae B33]
 gi|227081775|ref|YP_002810326.1| putative outer membrane protein [Vibrio cholerae M66-2]
 gi|229508265|ref|ZP_04397770.1| outer membrane protein [Vibrio cholerae BX 330286]
 gi|229511496|ref|ZP_04400975.1| outer membrane protein [Vibrio cholerae B33]
 gi|229518635|ref|ZP_04408078.1| outer membrane protein [Vibrio cholerae RC9]
 gi|229520779|ref|ZP_04410202.1| outer membrane protein [Vibrio cholerae TM 11079-80]
 gi|229523717|ref|ZP_04413122.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
 gi|229529345|ref|ZP_04418735.1| outer membrane protein [Vibrio cholerae 12129(1)]
 gi|229607839|ref|YP_002878487.1| outer membrane protein [Vibrio cholerae MJ-1236]
 gi|254226120|ref|ZP_04919717.1| outer membrane protein, putative [Vibrio cholerae V51]
 gi|254285433|ref|ZP_04960398.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
 gi|254848742|ref|ZP_05238092.1| outer membrane protein [Vibrio cholerae MO10]
 gi|255744948|ref|ZP_05418898.1| outer membrane protein [Vibrio cholera CIRS 101]
 gi|262161767|ref|ZP_06030785.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
 gi|262169640|ref|ZP_06037331.1| outer membrane protein [Vibrio cholerae RC27]
 gi|262189703|ref|ZP_06048070.1| outer membrane protein [Vibrio cholerae CT 5369-93]
 gi|298498295|ref|ZP_07008102.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656135|gb|AAF94775.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546319|gb|EAX56596.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
 gi|121628244|gb|EAX60761.1| outer membrane protein, putative [Vibrio cholerae V52]
 gi|124115205|gb|EAY34025.1| outer membrane protein, putative [Vibrio cholerae 1587]
 gi|124122220|gb|EAY40963.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
 gi|125621355|gb|EAZ49692.1| outer membrane protein, putative [Vibrio cholerae V51]
 gi|126510081|gb|EAZ72675.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
 gi|126520270|gb|EAZ77493.1| outer membrane protein, putative [Vibrio cholerae B33]
 gi|146315760|gb|ABQ20299.1| putative outer membrane protein [Vibrio cholerae O395]
 gi|150424705|gb|EDN16641.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
 gi|227009663|gb|ACP05875.1| putative outer membrane protein [Vibrio cholerae M66-2]
 gi|227013531|gb|ACP09741.1| putative outer membrane protein [Vibrio cholerae O395]
 gi|229333119|gb|EEN98605.1| outer membrane protein [Vibrio cholerae 12129(1)]
 gi|229337298|gb|EEO02315.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
 gi|229342334|gb|EEO07329.1| outer membrane protein [Vibrio cholerae TM 11079-80]
 gi|229343324|gb|EEO08299.1| outer membrane protein [Vibrio cholerae RC9]
 gi|229351461|gb|EEO16402.1| outer membrane protein [Vibrio cholerae B33]
 gi|229355770|gb|EEO20691.1| outer membrane protein [Vibrio cholerae BX 330286]
 gi|229370494|gb|ACQ60917.1| outer membrane protein [Vibrio cholerae MJ-1236]
 gi|254844447|gb|EET22861.1| outer membrane protein [Vibrio cholerae MO10]
 gi|255737419|gb|EET92814.1| outer membrane protein [Vibrio cholera CIRS 101]
 gi|262021874|gb|EEY40584.1| outer membrane protein [Vibrio cholerae RC27]
 gi|262028499|gb|EEY47154.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
 gi|262034416|gb|EEY52789.1| outer membrane protein [Vibrio cholerae CT 5369-93]
 gi|297542628|gb|EFH78678.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327484234|gb|AEA78641.1| outer membrane protein, putative [Vibrio cholerae LMA3894-4]
          Length = 212

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   LQD  +        L  D      +        + S   Q+   +F   SS   
Sbjct: 42  ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P  +  ++++ E L       I ++G+         A  N  LS  R+ +    L++ GV
Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +R++ I G+    L++    D  ++ NRR+   V   +G
Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198


>gi|145588969|ref|YP_001155566.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047375|gb|ABP34002.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 163

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 9/106 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+  S    P+   ++      L           I+G+TD       A  N  L   R+ 
Sbjct: 60  FEFDSYSIDPKYASIISAHASYLKSFERQKASIIIQGNTDDR---GTAEYNLALGQRRSE 116

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           +  + L+  GVSE ++  +S F   + +  +    +   NRR DI+
Sbjct: 117 AVKKALLALGVSESQVEAVS-FGKEKPENPAQTEAAFKENRRADIV 161


>gi|83312092|ref|YP_422356.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82946933|dbj|BAE51797.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 167

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +    +F         +   +L  +  +L   ++  + I GH D +        N  +  
Sbjct: 57  REMEILFAAGRLDLDAKARQILDDVAGILAREASIPVIIEGHADDT---GTREYNLAIGE 113

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            RA +  Q L+  GV  +RI  IS F   R +       +   NRR+ + +E
Sbjct: 114 RRAETVRQYLIGRGVDGERIRAIS-FGKERPRAPGRTKAARAANRRVVVRLE 164


>gi|261211744|ref|ZP_05926031.1| outer membrane protein [Vibrio sp. RC341]
 gi|260839094|gb|EEX65726.1| outer membrane protein [Vibrio sp. RC341]
          Length = 212

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 7/168 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
                    +   L+D           L  D      +        + +   Q+   +F 
Sbjct: 35  DYRATPLADQIADLKDDDNDGVINARDLCPDTPRGSEIDNDGCGTFIKASQMQQLHILFA 94

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS   P  +  ++++ E L       I ++G+         A  N  LS  R+ +   
Sbjct: 95  NDSSAIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV---GRADYNLALSKQRSEAVRD 151

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            L++ G+   R++ I G+    L+     D  ++ NRR+   V   +G
Sbjct: 152 QLIRDGIDPSRVN-IVGYGDSVLEAEGEDDISHARNRRVTATVVGYKG 198


>gi|134295071|ref|YP_001118806.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134138228|gb|ABO53971.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 223

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  G+  ++I    G             N  N           RR+++ V 
Sbjct: 154 RAQAVKSYLVSKGIPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 210

Query: 340 DRQ 342
             Q
Sbjct: 211 GTQ 213


>gi|317151983|ref|YP_004120031.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942234|gb|ADU61285.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 241

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 10/169 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L ++    + +K+RL+DL          L    + K +       G+ +   D+    +
Sbjct: 74  ELMEKPWEVLDKKQRLKDLLFPDDVLPDDLSKAELDKNLEILAKPDGVALVFTDKL---L 130

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  +S        +L+ +  VL  +   +++ GHTDAS           LS DRA +  
Sbjct: 131 FEPGASRLSLRGEQLLEALTPVLLFTAAPVNVAGHTDASDTGADPY---ALSGDRALAVL 187

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDILVEDRQ 342
             L+ +GV  DR   +S +      +        +S NRR++IL++  +
Sbjct: 188 SFLVDAGV-PDRRFSLSAYGSDVPALDERDRPVASSMNRRVEILLKTAR 235


>gi|254000099|ref|YP_003052162.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
 gi|313202058|ref|YP_004040716.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
 gi|253986778|gb|ACT51635.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
 gi|312441374|gb|ADQ85480.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            + +  FD       PE   ++    + L    +   I +G+TD          N  L  
Sbjct: 69  SKRSVYFDFDKDEVKPEYRDLVNAHAKYLVEHPDAKVILQGNTDER---GTREYNLALGQ 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA +  QVL   GVS+ +I  IS +   + + A     +   NRR DI+
Sbjct: 126 RRAVAVKQVLNLQGVSDKQIETIS-YGEEKPQAAGSDEAAYSKNRRADIV 174


>gi|221369488|ref|YP_002520584.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
 gi|221162540|gb|ACM03511.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 453

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 13/234 (5%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + + +  +++      +   + +  +        + S + + L     L   + +   + 
Sbjct: 225 VAAPDAPRRFAMPAWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPVERAALFR 284

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P  +      ++ +  + +L     +      A  +            + I  +   + 
Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289
            +F  + +   P+   ++  +  VLA +      + + GHTD  P    N    N  LS 
Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RA +   +L++ GV    I    G A       +      + NRR++I +E R
Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452


>gi|152971453|ref|YP_001336562.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956302|gb|ABR78332.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 127

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           ++ +FDK+     P++   +  +   LA +      + GHTD          N  LSL R
Sbjct: 19  DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 75

Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A S      +   V    +    G        ++D     + NRR+ +++
Sbjct: 76  ANSVADAWAEGAHVPRSNLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 124


>gi|308184601|ref|YP_003928734.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
 gi|308060521|gb|ADO02417.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
          Length = 257

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|294140562|ref|YP_003556540.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
 gi|293327031|dbj|BAJ01762.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           S  ++G V    V  +L    +  +    + + +   FD   S        +L+  G  L
Sbjct: 41  SELVTGGVETGAVTPILTPEEQQRLKYQELRKEHIIYFDFDRSSVSAHFAEILRAHGHYL 100

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                V   I GH D          N  L   RA +  + L   GV   ++S +S +   
Sbjct: 101 VEHPNVRLMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMGVLPSQMSIVS-YGEE 156

Query: 319 RLKI--ASDPMNSANRRIDIL 337
           +      +D   + NRR  ++
Sbjct: 157 KPLDFSRTDDGFAINRRAVLV 177


>gi|237748798|ref|ZP_04579278.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
           OXCC13]
 gi|229380160|gb|EEO30251.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
           OXCC13]
          Length = 169

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S +   +   V+Q   + L    +   + +G+TD          N  L   
Sbjct: 63  QRSVYFDFDSFVVSSQYEPVVQAHAKYLNSHKDRKVVIQGNTDDR---GGREYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + +   GVS+ +I  +S F   + K    ++   + NRR DI+
Sbjct: 120 RAEAVRKSMNLMGVSDSQIEAVS-FGKEKPKATGNNEAAWAENRRADIV 167


>gi|284036230|ref|YP_003386160.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283815523|gb|ADB37361.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 757

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 12/120 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           Q     +D +      +    L  + E+L    ++   +R HTD+         N RLS 
Sbjct: 642 QLKNIYYDLNKFFIRADAAQELDHVLEILKEYPQMQIELRSHTDSR---ATDTYNIRLSE 698

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
            RA +A   L+  G+S  R+    G+    +          ++  +  NRR +  +   Q
Sbjct: 699 SRARAAMDYLVARGISASRLIA-RGYGESEIINGCIDGVNCTEGEHQQNRRTEFKIVAVQ 757


>gi|254496226|ref|ZP_05109120.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella drancourtii LLAP12]
 gi|254354531|gb|EET13172.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella drancourtii LLAP12]
          Length = 175

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F    S   P+ +  +    E L       + + GHTD          N  L   RA +
Sbjct: 70  LFSYDDSNLNPKYLPSVNAQAEYLKSHAGARVLVAGHTDER---GSREYNVALGERRANT 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
              +L  +GVS  +I +I  +   R         S   NRR++   E  +
Sbjct: 127 VADILRMAGVSRQQI-RIVSYGKERPINLGHDEASHLQNRRVEFTYEATR 175


>gi|89092902|ref|ZP_01165854.1| ompA family protein [Oceanospirillum sp. MED92]
 gi|89082927|gb|EAR62147.1| ompA family protein [Oceanospirillum sp. MED92]
          Length = 617

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 18/294 (6%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           ++  NA +    K       P        + G +D           K  + + E+  +  
Sbjct: 323 LFSGNAVN---WKEFGGQDAPVKVFARDTNSGTWDSFKS---MVLKKHGVKLVENAVRIE 376

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
             +++     K         + Y+  S+      +              + D        
Sbjct: 377 SSVELSDQVSKTPGAIGFIGLPYVLRSKALAISDDRNGNPIYPTTFTISTEDYPLVRRLY 436

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISST--LSGLVADNIVKGVLFETTRTGILISI 228
                   +  +          +   + +     +S  +                  I+ 
Sbjct: 437 IYEPSTIDTDSQAHKFITFVLSEAGQQVVKEAGFISQNIYKTKPMMTASLPQNYLAAIAN 496

Query: 229 IDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
            D+ +    F   +     +    LQ++ +    +      + G +D+         N  
Sbjct: 497 ADRLSLNFRFHSGTFQLDNKAERDLQRVVDFFEKNPGQQAMLIGFSDSI---GDPAANAS 553

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           LSL RA +  + L+  G++   I    G        ++        NRR++I V
Sbjct: 554 LSLQRAKAVERALLARGIN---IQTTLGMGEAAPIASNQTRIGRERNRRVEIWV 604


>gi|254297563|ref|ZP_04965016.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|157807731|gb|EDO84901.1| ompA family protein [Burkholderia pseudomallei 406e]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 195

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254


>gi|126452529|ref|YP_001066330.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|134277725|ref|ZP_01764440.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|217421747|ref|ZP_03453251.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|237812370|ref|YP_002896821.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|242318072|ref|ZP_04817088.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254179713|ref|ZP_04886312.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|126226171|gb|ABN89711.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|134251375|gb|EBA51454.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|184210253|gb|EDU07296.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|217395489|gb|EEC35507.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|237502710|gb|ACQ95028.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|242141311|gb|EES27713.1| ompA family protein [Burkholderia pseudomallei 1106b]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 195

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254


>gi|77163684|ref|YP_342209.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|254435498|ref|ZP_05049005.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
           oceani AFC27]
 gi|76881998|gb|ABA56679.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
 gi|207088609|gb|EDZ65881.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
           oceani AFC27]
          Length = 187

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+  SS    +   +++  G  LA   ++  ++ GHTD          N  L   RA 
Sbjct: 82  VYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKVTLEGHTDER---GSREYNLALGERRAN 138

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           +   +++  G SED++ ++  +   R  +    +     NRR++IL
Sbjct: 139 AVRSLILLMGASEDQV-EVVSYGEERPAVDGQDEGAWQLNRRVEIL 183


>gi|89071216|ref|ZP_01158402.1| OmpA family protein [Oceanicola granulosus HTCC2516]
 gi|89043258|gb|EAR49486.1| OmpA family protein [Oceanicola granulosus HTCC2516]
          Length = 107

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           +  + T   +++++       +FD  S+         L  +   L +      ++ GHTD
Sbjct: 1   MRIDNTGDSLVVTLPQD---ILFDTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTD 57

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
            +     A  N  LS  RA +    L+ SGVS  RI+ + G         +   
Sbjct: 58  NT---GEASYNQNLSRRRAQAVTSTLISSGVSAGRINTV-GRGEDAPIATNLTE 107


>gi|294637420|ref|ZP_06715711.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
           23685]
 gi|291089413|gb|EFE21974.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
           23685]
          Length = 170

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F        PE +  L      L ++     ++ GHTD         
Sbjct: 57  LQMQELQKNNIVYFGLDKYDVTPEYMQELDAHAAFLRNNPSYKVTVEGHTDER---GTPE 113

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            N  L   RA +    L   GVS D+I  +S +   +  +        + NRR  ++
Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169


>gi|88857215|ref|ZP_01131858.1| ompA family protein [Pseudoalteromonas tunicata D2]
 gi|88820412|gb|EAR30224.1| ompA family protein [Pseudoalteromonas tunicata D2]
          Length = 580

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/294 (10%), Positives = 85/294 (28%), Gaps = 16/294 (5%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
            +            Q   P     + A        +  +     K DLS+ ++ T+    
Sbjct: 296 ALANVFAGKINNWAQLGGPDLPIKLFARDVKSGTWDTFKNLVLKKFDLSLAQNATRLESS 355

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN---- 168
            ++ +   + +       + Y+  ++     +   T      +    + D   +      
Sbjct: 356 TELSTLVSQDEAAIGFIGLNYIQYNKALAISEGEGTAAIFPTRFTIGTEDYALARRLYLY 415

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
              N         +       + + + +  IS  +       + +          +   +
Sbjct: 416 TPTNASNQVKEFSQFAISSAGQAIVEKSGLISQNIKVESVYPMAEAPEIYNKYADLGKRL 475

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
                   F+        +    L ++ E +  +     +  G++D+         N +L
Sbjct: 476 SLNFR---FNYGDQDLDNKGKRDLDRLIEFMEENPGRRLVLMGYSDSI---GAKLKNTQL 529

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
           SL+RA +  + L   G+    +  + G           ++     NRR+++ + 
Sbjct: 530 SLNRAKAVEKELQARGIG---VMAVEGLGEALPVANNDNESGRERNRRVEVWLL 580


>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
          Length = 348

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++           F    +   P    VL  I   +A      
Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +RR++I V+  +
Sbjct: 321 CDSVKGRKALIACLADDRRVEIPVKGNK 348


>gi|326405348|ref|YP_004285430.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
 gi|325052210|dbj|BAJ82548.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
          Length = 203

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+   P+ +  L ++G  L   T       + GHTD +     A  N  LS  RA 
Sbjct: 97  FATGSAKLTPQAVTELDRLGRALTDKTLAAYHFRVVGHTDTT---GAASTNLALSQARAA 153

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +    LM    +   R+   +G     L + + P   N ANRR+ I+
Sbjct: 154 AVKTYLMSKFDIPATRLQA-TGVGEADLLVPTGPNVANRANRRVQII 199


>gi|226197157|ref|ZP_03792734.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|225930536|gb|EEH26546.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 195

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254


>gi|31747683|gb|AAO38325.1| Lfe140p2 [Leptospirillum ferrooxidans]
          Length = 94

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                 N  LS  RA S  +VL+  G++ +R+ +I G                  NRR++
Sbjct: 22  TGSGEYNDTLSRRRAESVREVLLNDGINPERM-RIRGLGSRYPVATDKTSAGRQANRRVE 80

Query: 336 ILVEDRQG 343
           I+V D+ G
Sbjct: 81  IIVSDKNG 88


>gi|149191257|ref|ZP_01869513.1| outer membrane protein [Vibrio shilonii AK1]
 gi|148834927|gb|EDL51908.1| outer membrane protein [Vibrio shilonii AK1]
          Length = 275

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 78/248 (31%), Gaps = 9/248 (3%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEHCKNSLTRDSEKGKDLC 158
            S  +  T    +   GS                L    + +    +SL  +  +     
Sbjct: 23  TSYPDEGTGGIAENYAGSDFSPVMPDEPLGPEHGLRFDWKLAALHLDSLIEEGAQWCFPA 82

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
                ++  N+        L  +    +  ++K+L DL  ++   L+       +KG  F
Sbjct: 83  AVLQAQEKQNRIARELEGGLWIDAANDIVIQRKKLNDLELRLDYVLNEATCAPPLKGKDF 142

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276
           +     +            F  +S    P+ +  L +   +L     +  S+ GH DA+ 
Sbjct: 143 DDLMQVVKRVYQLLNVDNQFAYNSVEVNPKYMGHLAEAANILKQHPTIRLSVTGHADAT- 201

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                  N +++  RA    + L   G++  RI   S           D       NRR+
Sbjct: 202 --GGTEYNEKIAKGRAQQVKRYLTIFGLAPGRIETHS-LGEELPLYEGDSPGVRLTNRRV 258

Query: 335 DILVEDRQ 342
            I V   +
Sbjct: 259 SIEVIADK 266


>gi|78065624|ref|YP_368393.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77966369|gb|ABB07749.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 222

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 96  QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV  ++I    G             N  N           RR+++ V 
Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209

Query: 340 DRQ 342
             Q
Sbjct: 210 GTQ 212


>gi|107022117|ref|YP_620444.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116689062|ref|YP_834685.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|170732350|ref|YP_001764297.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           MC0-3]
 gi|206561293|ref|YP_002232058.1| putative ompA family protein [Burkholderia cenocepacia J2315]
 gi|254245998|ref|ZP_04939319.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
           PC184]
 gi|105892306|gb|ABF75471.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116647151|gb|ABK07792.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|124870774|gb|EAY62490.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
           PC184]
 gi|169815592|gb|ACA90175.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
 gi|198037335|emb|CAR53262.1| putative ompA family protein [Burkholderia cenocepacia J2315]
          Length = 222

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 96  QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV  ++I    G             N  N           RR+++ V 
Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209

Query: 340 DRQ 342
             Q
Sbjct: 210 GTQ 212


>gi|254488141|ref|ZP_05101346.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
 gi|214045010|gb|EEB85648.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
          Length = 171

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F+ + S   P     L      L  + +    I GH D          N  L   R
Sbjct: 61  DRVLFEVNQSNLTPAGQATLDGQATWLITNIDYQAIIEGHADEQ---GTREYNVALGARR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +A + L+  GV+ +R+ ++  +   R           + NRR
Sbjct: 118 ANAAREYLISRGVAGNRL-RVVSYGKERPIEVCSAEACYAKNRR 160


>gi|315182421|gb|ADT89334.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
          Length = 316

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 10/149 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS---SSIPLPETIVV 251
               I S+    + +N               I          F          L +  V 
Sbjct: 171 AEMVIDSSQVEPMMNNSPIEYHIPKDMCAESIE-NMLSGQYAFHFGFDIHYEALDDVFVY 229

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            + I  +   S   + + GH D        + N+ LSL RA +   +L++ GV  ++I  
Sbjct: 230 SKVIDCISKDSRIKVLLVGHADNQ---GSNQYNYALSLRRAVTISNILVELGVDPEQIV- 285

Query: 312 ISGFAHHRLKIASD--PMNSANRRIDILV 338
           I           +        NRR+++++
Sbjct: 286 IEARGDSEPIANNAILEQRKKNRRVEMIL 314


>gi|254260999|ref|ZP_04952053.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254219688|gb|EET09072.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 195

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254


>gi|212634658|ref|YP_002311183.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212556142|gb|ACJ28596.1| OmpA [Shewanella piezotolerans WP3]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 7/156 (4%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           +              + + +  V    V  VL    +  +    + + +   FD   S  
Sbjct: 26  SESETDATSSTESSTTGSANNGVETGGVAPVLTPAEQQQLKFQELRKEHIIYFDFDRSSV 85

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   VL+  G+ L       + I GH D          N  L   RA +  + L   G
Sbjct: 86  SQQFAEVLEAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 142

Query: 304 VSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
           V   ++  +  +   +      +D   + NRR  ++
Sbjct: 143 VQPSQM-SVVSYGEEKPMDLSRTDDGFAKNRRAVLV 177


>gi|254197945|ref|ZP_04904367.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|169654686|gb|EDS87379.1| ompA family protein [Burkholderia pseudomallei S13]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%)

Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +F            +    L  +   +     S   + + G+TD          N RLS 
Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 195

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
           +RA +    ++  G+   +I+ + G       +  +             NRR++I ++ +
Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254


>gi|301156596|emb|CBW16067.1| outer membrane protein A (3a;II*;G;d) [Haemophilus parainfluenzae
           T3T1]
          Length = 361

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  I   +A      +++ G+TD          N +LS  RA S 
Sbjct: 248 FAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRI---GKDAPNVKLSQRRADSV 304

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342
              L+  GV    IS + G         S               + +RR++I V   +
Sbjct: 305 ANYLVAKGVPAQSISAV-GHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAVNGTK 361


>gi|239906031|ref|YP_002952770.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
           magneticus RS-1]
 gi|239795895|dbj|BAH74884.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
           magneticus RS-1]
          Length = 171

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    E    L +  E+L    ++   + G+ D       A  N  L   RA +A
Sbjct: 69  FALDSSNLSAEARQNLTRKAEILRQYPQIKLIVEGNCDQR---GTAEYNLALGERRAQAA 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            Q L+  G+  DR+S +S +   R           + NRR + 
Sbjct: 126 AQYLVNLGIGADRLSTVS-YGKERPLDPGTSEAAYAKNRRDEF 167


>gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 333

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE +  L  + + +           + G+TD          N +LS 
Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    L+  G+   ++  I G         +  D + +          +RR+++ V
Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRV 325

Query: 339 EDRQ 342
              Q
Sbjct: 326 TGIQ 329


>gi|261365210|ref|ZP_05978093.1| OmpA family protein [Neisseria mucosa ATCC 25996]
 gi|288566472|gb|EFC88032.1| OmpA family protein [Neisseria mucosa ATCC 25996]
          Length = 253

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +   +  +F        PE    L  + + L
Sbjct: 55  DKETQGRVECGDREAVAAVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLDALAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              + + + + GHTD   F      N  LS  RA      L+  GV   ++S + G    
Sbjct: 115 SNENVQTVRVEGHTD---FMGSEEYNQALSERRANVVANYLVGRGVPSSKVSAV-GLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|167946599|ref|ZP_02533673.1| OmpA/MotB domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 126

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           T      +    NW LS  RA S  + L   G+ + R++   GF         D   +  
Sbjct: 9   TGYRSTPSSVPSNWELSSARAVSVVRYLASQGIPQRRLTAA-GFGEFHSIDTGDTPEALS 67

Query: 331 -NRRID 335
            NRRI+
Sbjct: 68  HNRRIE 73


>gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 364

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L  +   + +   S   I + G+TD          N +LS 
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    ++  G     ++ + G+           D +            +RR+++ V
Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGTK 360


>gi|220921338|ref|YP_002496639.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219945944|gb|ACL56336.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 222

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +SS   P+ + V++ +G  LA          I GHTD    +   + N  LS  RA 
Sbjct: 111 FDYNSSKIGPKALPVVKSLGAALARPELKGNTFLIVGHTD---GKGKDQINQTLSERRAE 167

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           +  Q ++++ GV    +  + G+   +LK  ++P+++ NRR+
Sbjct: 168 AVKQYIVQNYGVPASNLVSV-GYGKSQLKDTANPLSAVNRRV 208


>gi|300776234|ref|ZP_07086093.1| outer membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300505367|gb|EFK36506.1| outer membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 136

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           ++    +     FD +S   LP    +L      +  S+   ++ G TD          N
Sbjct: 18  VVETETKLEGIEFDLNSDRILPSNTPILNNAVNYINSSSGSYNVIGATDTR---GTDAYN 74

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334
            +LS  RA +    L+K+GV   ++  I G     LK           +  N ANRR+
Sbjct: 75  QKLSERRANNVKNYLIKNGVQTGKLQAI-GKGEKDLKYPECEPATKCPEWKNRANRRV 131


>gi|117920971|ref|YP_870163.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117613303|gb|ABK48757.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    E   VL+  G  L     V   I GH D          N  L  
Sbjct: 72  KEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +    +      + NRR  ++
Sbjct: 129 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 177


>gi|329948277|ref|ZP_08295121.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328522801|gb|EGF49909.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 490

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           ++  DS               ++++E        K    A+K  K++ + A      ++ 
Sbjct: 99  AVDADSVTVLVPQTGFVTVDVVSRDEASRTGIDLKAMETAVKDDKQVTEQAAASPIEINS 158

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263
              D     +   T    + I +        F   S+         LQ +   ++     
Sbjct: 159 RTVDG---SLGARTGDKDVTIVMASDVT---FASDSADLAAAAEAQLQTVAGQISQYPDG 212

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             ++I GHTD          N  LS  RA +    L +  G+ +     ++G      ++
Sbjct: 213 GTLTIVGHTDDVQ---DDAYNQALSEKRANAVKTRLEQLTGLDKWN-PSVAGKGESEPRV 268

Query: 323 A--SDPMNSANRRIDILVEDRQG 343
           +  +D   +ANRR++I +    G
Sbjct: 269 SGTTDEARAANRRVEITLTPTGG 291


>gi|294142621|ref|YP_003558599.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293329090|dbj|BAJ03821.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 200

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 228 IIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           I D+     +F   S    P     ++ I   +        +I GH   +        N 
Sbjct: 67  IHDRSELKILFPNDSYYIDPMYYDQVEVIAVFMNDFPNTNVTIEGHCSKT---GSYEHNL 123

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
            LS +RA +   +L +   ++ DR++ I G+++ R    SD   +   NRR+
Sbjct: 124 ALSQNRANAVTSLLAEHYSIASDRLTAI-GYSYDRPVDESDTDMAHTRNRRV 174


>gi|262375753|ref|ZP_06068985.1| OmpA/MotB [Acinetobacter lwoffii SH145]
 gi|262309356|gb|EEY90487.1| OmpA/MotB [Acinetobacter lwoffii SH145]
          Length = 215

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 20/176 (11%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID---QRNTPM 236
           ++    ++ K+ L+         +S ++ D +   V        I   I D        +
Sbjct: 32  QKTYAELRHKQELEQGGAAQQKRISEMLTD-LKNSVDETGASNLISFDIADGKITLKENI 90

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNI----------A 281
           F+  S+   P      + + + +      +    + + GHTD S  +             
Sbjct: 91  FNVGSACITPSAAKTFKSLDQRIVSFLKENPKASVFVEGHTDNSIVKQPVLDFKEKCTVY 150

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            DN+ LS  RA  A ++++ S   +E     ++G+   R     DP +  NRR++I
Sbjct: 151 DDNFTLSAARAREARKLIISSLDANEANRVVVAGYGDSRPLNGIDPSDGRNRRVEI 206


>gi|145297815|ref|YP_001140656.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850587|gb|ABO88908.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 174

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + N   F         +   +L      L     V   I GH D          N  L  
Sbjct: 68  RDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER---GTPEYNIALGE 124

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV  +++S +S +   +    S   +  + NRR  ++
Sbjct: 125 RRAKAVAKYLQTLGVQAEQLSIVS-YGEEKPLDLSHTEDAFAKNRRAVLV 173


>gi|113970702|ref|YP_734495.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|114047931|ref|YP_738481.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113885386|gb|ABI39438.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
 gi|113889373|gb|ABI43424.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 178

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    E   VL+  G  L     V   I GH D          N  L  
Sbjct: 72  KEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +    +      + NRR  ++
Sbjct: 129 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 177


>gi|262393713|ref|YP_003285567.1| sodium-type flagellar protein MotY [Vibrio sp. Ex25]
 gi|1550618|dbj|BAA12313.1| component of sodium-driven polar flagellar motor [Vibrio
           alginolyticus]
 gi|262337307|gb|ACY51102.1| sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25]
          Length = 293

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++  N       +     +  S  D   T + +++        +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+ E
Sbjct: 199 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292


>gi|317064019|ref|ZP_07928504.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
 gi|313689695|gb|EFS26530.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
          Length = 805

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F    S    +   V++KI E +       +++I GHTD+         N +LS  RA S
Sbjct: 701 FSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSI---GTTEYNQKLSEKRAES 757

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
             +   ++ +  +   +  G+   R    +      + NRR+DI
Sbjct: 758 VEKEFKEN-LKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVDI 800


>gi|260769571|ref|ZP_05878504.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
 gi|260614909|gb|EEX40095.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
          Length = 316

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 8/153 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + R  ++    S     +    I   +  +     I   +  Q     F         E 
Sbjct: 167 QSRPAEMVIDSSQVEPMMNNSPIEYHIPKDMCAESIENMLSGQYAFH-FGFDIHYEALED 225

Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           + V  K+ + +   S   + + GH D        + N+ LSL RA +   +L++ GV  +
Sbjct: 226 VFVYSKVIDCISKDSRIKVLLVGHADNQ---GSNQYNYALSLRRAVTISNILVELGVDPE 282

Query: 308 RISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           +I  I           +        NRR+++++
Sbjct: 283 QIV-IEARGDSEPIANNAILEQRKKNRRVEMIL 314


>gi|257469789|ref|ZP_05633881.1| putative autotransporter protein [Fusobacterium ulcerans ATCC 49185]
          Length = 1198

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 8/104 (7%)

Query: 237  FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F    S    +   V++KI E +       +++I GHTD+         N +LS  RA S
Sbjct: 1094 FSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSI---GTTEYNQKLSEKRAES 1150

Query: 295  AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
              +   ++ +  +   +  G+   R    +      + NRR+DI
Sbjct: 1151 VEKEFKEN-LKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVDI 1193


>gi|86147194|ref|ZP_01065510.1| outer membrane protein [Vibrio sp. MED222]
 gi|85835078|gb|EAQ53220.1| outer membrane protein [Vibrio sp. MED222]
          Length = 213

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 14/155 (9%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--------TPMFDKSSSI 243
           +Q  A   +  +  L+ D + +          +L                   FD     
Sbjct: 61  MQVNASTANQAIKNLIQDKLTQVSESADCAQYLLSRTKFVEGKLAREVLARVTFDFDDDE 120

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              ++  +L  +   L H T    + G+TD+   +     N  L L R+      L + G
Sbjct: 121 LNQKSRYLLLNLIAKLEHQTPEFIVTGNTDS---KGSDSYNLSLGLQRSNVVVGYLKEQG 177

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           V+ + +  +S         +++  +    NRR+DI
Sbjct: 178 VNIEDL-TVSSQGEANPVQSNETESGRHNNRRVDI 211


>gi|300692236|ref|YP_003753231.1| peptidoglycan-associated lipoprotein, protein pal, component of
           tol-pal system [Ralstonia solanacearum PSI07]
 gi|299079296|emb|CBJ51968.1| Peptidoglycan-associated lipoprotein, protein pal, component of
           tol-pal system [Ralstonia solanacearum PSI07]
          Length = 172

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +L +    L    +    I+G+TD       +  N  L   
Sbjct: 67  KRSVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GV + ++  +S     + +     +   + NRR DI
Sbjct: 124 RAEAVRRALSSLGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDI 170


>gi|194288903|ref|YP_002004810.1| outer membrane protein, ompa domain [Cupriavidus taiwanensis LMG
           19424]
 gi|193222738|emb|CAQ68741.1| putative outer membrane protein, ompA domain [Cupriavidus
           taiwanensis LMG 19424]
          Length = 217

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L   T  + I  GHTD+       + N RLS+ RA S
Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDILVEDRQ 342
               L+  GV  +R+    G    +LK+                  NRR+++ V   +
Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGTR 214


>gi|113866814|ref|YP_725303.1| outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Ralstonia eutropha H16]
 gi|113525590|emb|CAJ91935.1| outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Ralstonia eutropha H16]
          Length = 217

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   ++  PE    L  +   L   T  + I  GHTD+       + N RLS+ RA S
Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDILVEDRQ 342
               L+  GV  +R+    G    +LK+                  NRR+++ V   +
Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGTR 214


>gi|19881379|gb|AAM00932.1|AF491824_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGNE 344


>gi|77457455|ref|YP_346960.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77381458|gb|ABA72971.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 364

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 12/222 (5%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
               +  ++   S  S   K  +  +++      +    E     +  +      ++   
Sbjct: 63  AESSSPWYWPFGSDDSAAAKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDTAK 122

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            +      +     +      L        +  E     ++++         F+      
Sbjct: 123 VVP-MPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVLVVT---APVEGSFNPDRPAM 178

Query: 245 L-PETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           L P T+    ++ ++L A     + + GH+D +     A  N +LS +RA +   +   S
Sbjct: 179 LLPVTLGPFTRVAKILEADPKTAVLVLGHSDTT---GAAPANVKLSQERAQAVAAIFRLS 235

Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           G+  DR+  + G      + A+D     + NRR+++LV  + 
Sbjct: 236 GLQRDRLM-LRGMGSEAPRAANDSVEGRALNRRVELLVTPQN 276


>gi|309244383|gb|ADO52196.1| OprL [Pseudomonas sp. AF23]
 gi|309244387|gb|ADO52198.1| OprL [Pseudomonas sp. AF33]
 gi|309244389|gb|ADO52199.1| OprL [Pseudomonas sp. AF70]
 gi|309244391|gb|ADO52200.1| OprL [Pseudomonas sp. AF76]
 gi|309244393|gb|ADO52201.1| OprL [Pseudomonas sp. BcB122]
 gi|309244395|gb|ADO52202.1| OprL [Pseudomonas sp. BcB153]
          Length = 156

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   +++ G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKANGNRVTLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150


>gi|126666113|ref|ZP_01737093.1| OmpA/MotB [Marinobacter sp. ELB17]
 gi|126629435|gb|EBA00053.1| OmpA/MotB [Marinobacter sp. ELB17]
          Length = 110

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 268 IRGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           I+GH+D+        ++   NW LS  RA SA +VL ++G+   R+  + GFA  R  + 
Sbjct: 16  IQGHSDSRSIAPALQSLYPTNWELSASRAASAVRVLREAGIDPSRMQAV-GFADARPLVK 74

Query: 324 S-DP-MNSANRRIDILVEDRQ 342
             D      NRRI++L+   Q
Sbjct: 75  EIDTVSRRKNRRIEVLLYPSQ 95


>gi|78777594|ref|YP_393909.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
 gi|78498134|gb|ABB44674.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
          Length = 176

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 8/117 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284
            I  +  T  FD        +    L     V   S     +   G+ D          N
Sbjct: 63  RIEKELKTIYFDFDKFNIKADMQANLSTDASVAKSSASKFQLKLEGNCDEW---GSDEYN 119

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
           + L L RA S  + L+  GV  +RIS +S F               + NRR+D  + 
Sbjct: 120 FALGLKRAESVKKALVAEGVDANRISMVS-FGESNPTCTDKTKECWAENRRVDFKLL 175


>gi|288801512|ref|ZP_06406964.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331593|gb|EFC70079.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 674

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D   +   PE+   L ++ ++L  +    I +  HTD   +R     N
Sbjct: 498 ITAPVLIDNIFYDFDKATLRPESTTSLDELVKLLNENPNVTIELSAHTD---YRGSEEYN 554

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFA------------HHRLKIASDPM----- 327
            +LS  RA +    L+  G+S +R++ + G+                  +  D       
Sbjct: 555 KKLSQKRAEAVVNYLIAHGISSERLTPV-GYGKEKPKKIKKKLTEKYPWLKEDSALTESF 613

Query: 328 ------------NSANRRIDILVED 340
                       N  NRR + +V  
Sbjct: 614 IQSLDKEKQEICNQLNRRTEFIVLR 638


>gi|257456150|ref|ZP_05621347.1| OmpA family protein [Treponema vincentii ATCC 35580]
 gi|257446236|gb|EEV21282.1| OmpA family protein [Treponema vincentii ATCC 35580]
          Length = 1355

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 85/294 (28%), Gaps = 14/294 (4%)

Query: 58   DDDTKKAIEQYFNPFGKNLMT----ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
              +    +       GK         +       N  +                   + +
Sbjct: 1061 SSEKGDTLASSIQWDGKADSGRVVSGTFIAELSLNYIKGDELVASTAPFISSTKAPELGV 1120

Query: 114  KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            K+            E+ +F   +++     K       E      K        +K    
Sbjct: 1121 KLSPKYFSPDNDGNEDELFINLSAKSDTQVKQWSFEIREPEDTGNKLFWSTGGKDKITEQ 1180

Query: 174  FLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVLFETTRTGILI---SII 229
             +      K   ++                L+ +V   +   VL       + I   SII
Sbjct: 1181 IIWDGRSLKGETVQSATDYPYTFTVTDEIGLTSVVKGYVPIDVLVIRDGDKLKIAVPSII 1240

Query: 230  DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR--DNWR 286
             ++N   FD      +   I VL +I E+L    E    + GH +           D   
Sbjct: 1241 FRKNAADFDGLEQNVVDRNIKVLTRIAEILNKFPEYKVQVEGHANNVSGTEREEKEDLIP 1300

Query: 287  LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
            LS  RA +  + L++ GVS  R+S + G    +     +       NRR++ ++
Sbjct: 1301 LSAARADAVRRFLIERGVSRSRLSSV-GIGGTKPIASLSDKDNWWKNRRVEFVL 1353


>gi|83312347|ref|YP_422611.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82947188|dbj|BAE52052.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 410

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 86/278 (30%), Gaps = 13/278 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
              G + + A        +  +  +      +     T+         T Q+ Q +    
Sbjct: 6   RWVGLSAVAALAACAMPADVSDVQTILGSKATTGTPFTQALFQEYQAYTKQQVQTEVEWV 65

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +    +          ++  D    + L  +T  E +  +            + +     
Sbjct: 66  DASETARKGLKAGAGEAVLPDELGTRVLPAATVPELTAARARLMGYFQGGATQRVPAAAA 125

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII----DQRNTPM--FDKSSSI 243
           K        +     G  A       L         + +     D R + M  FD  S+ 
Sbjct: 126 KAQVAFDCWLEQAAEGYAASPCKATFLAHEPILKKAVGVTEVAADVRRSFMVNFDLGSAK 185

Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+ +  L++     A      +S+ G+TD       A  N RLS  RA +    L K 
Sbjct: 186 LSPQALQTLKEAAAAQAQMYAPLVSVAGYTDTL---GSADANLRLSRQRADAVTAELTKL 242

Query: 303 GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           GV+   I   +      L +A+  +   + NRR++I +
Sbjct: 243 GVNPA-IIAENALGESSLAVATGDNKAEAKNRRVEITL 279



 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 63/270 (23%), Gaps = 12/270 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                      K             ++ +          +   L+        Q Q    
Sbjct: 148 KATFLAHEPILKKAVGVTEVAADVRRSFMVNFDLGSAKLSPQALQTLKEAAAAQAQMYAP 207

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +     +        +L    ++   +                     S   +     K
Sbjct: 208 LVSVAGYTDTLGSADANLRLSRQRADAVTAELTKLGVNPAIIAENALGESSLAVATGDNK 267

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              ++   +I+                 +                  F   SS      I
Sbjct: 268 AEAKNRRVEITLAGPTWSHGRYGGYAYGDRGHGWGGGYYGHNGFAVFFLPGSSRLGTADI 327

Query: 250 VVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L+ +     +   + +++ G TD +     A  N RLS +RA +    + K G S   
Sbjct: 328 ERLKMVVAAQKNMKPKTVTVVGFTDQT---GSAATNARLSRERAQAVAAEIAKLGGST-- 382

Query: 309 ISKISGF-AHHRLKIASDPMNSANRRIDIL 337
            + +                +   RR++IL
Sbjct: 383 -TSVEARPGETW----GSSYDGQARRVEIL 407


>gi|327193535|gb|EGE60427.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 246

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+   +LQK+  V+       I I GHTDA      AR N  LS+ RA   
Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +   +   +  +R+  + G           P    NRR++ 
Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242


>gi|323494548|ref|ZP_08099653.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
 gi|323311275|gb|EGA64434.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
          Length = 204

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           ++   +++   +F   S    P     +Q + E LA      I I+G+            
Sbjct: 73  IVEEEERQLRILFANDSYEINPIFSDQIQTMAEFLARYKSASIQIQGYASKV---GDPDY 129

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334
           N  LS  RA++    L+   V   R+  I G+   RL+     +  ++ NRR+
Sbjct: 130 NLELSKKRAHAVEDELLSFEVDPKRV-TIVGYGETRLEAEGDDETSHALNRRV 181


>gi|190895263|ref|YP_001985556.1| hypothetical protein RHECIAT_PC0000936 [Rhizobium etli CIAT 652]
 gi|190700924|gb|ACE95006.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 246

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+   +LQK+  V+       I I GHTDA      AR N  LS+ RA   
Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +   +   +  +R+  + G           P    NRR++ 
Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242


>gi|332561144|ref|ZP_08415462.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
 gi|332274942|gb|EGJ20258.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
          Length = 453

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 80/234 (34%), Gaps = 13/234 (5%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + + +  +++      +   + +  +        + S + + L     L     +   + 
Sbjct: 225 VAAPDAPRRFAVPVWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPAERAALFR 284

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P  +      ++ +  + +L     +      A  +            + I  +   + 
Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289
            +F  + +   P+   ++  +  VLA +      + + GHTD  P    N    N  LS 
Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RA +   +L++ GV    I    G A       +      + NRR++I +E R
Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452


>gi|332704881|ref|ZP_08424969.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332555030|gb|EGJ52074.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 198

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 10/178 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             K+ +      S      M       D A + ++         +      +T +  +  
Sbjct: 24  AKKQVSSTPDQTSAAAQGEMTDGTPTDDEAARRAAEEEAYRRSELQDDQTGQTEQERLQA 83

Query: 227 SIIDQRNT---PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
               ++N      F   S     +   VLQ+  + L    +   +I+G  D         
Sbjct: 84  EQQAKQNINELVFFAYDSYELDSKAREVLQRKAQALKLMPDTRVTIKGFCDER---GTEE 140

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            N  L   RA +++  L+  GV+ +RI+ +S +        ++     + NRR +  +
Sbjct: 141 YNLALGERRARASFDFLVLMGVNPNRINIVS-YGEDNPLDPANSEAAYAKNRRCEFEI 197


>gi|281423524|ref|ZP_06254437.1| OmpA family protein [Prevotella oris F0302]
 gi|281402344|gb|EFB33175.1| OmpA family protein [Prevotella oris F0302]
          Length = 683

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D + +   PE+   L ++  +L  +    I +  H D   +R  A  N
Sbjct: 511 ITAPVLIDNIFYDFNKATLRPESTAALDELVTLLNENPHVTIELAAHCD---YRGSAEYN 567

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---------------------- 322
            RLS  RA +  + L+  G++ DR++ + G+   R K                       
Sbjct: 568 LRLSQQRAENVVRYLISKGIATDRLTAV-GYGKQRPKTIRKKLTEKYTWLKEGDQLTPAF 626

Query: 323 -------ASDPMNSANRRIDILVED 340
                    +  N  NRR +  V  
Sbjct: 627 IEKLDKEQQETCNQLNRRTEFSVLR 651


>gi|163745826|ref|ZP_02153185.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380571|gb|EDQ04981.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 178

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S         L      L  +++  ++  GH D          N  L   R
Sbjct: 67  DRVLFLVDQSTLTDVGRATLDGQVAWLQTNSDYQAVIEGHADEQ---GTREYNIALGGRR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + ++  G++  R+  IS +   R     + +   + NRR
Sbjct: 124 ANAVREYMISRGIAASRLKTIS-YGKERPIEICSDEACYAKNRR 166


>gi|124004937|ref|ZP_01689780.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
 gi|123989615|gb|EAY29161.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
          Length = 693

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S     E    L+K+   L  + +   +  GH D +        N +LS DRA 
Sbjct: 580 VFFDYKSDNIKKEHEKDLEKLVSYLISNPDANLVLNGHADQT---GTETRNKQLSSDRAR 636

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
              + L+   ++ +R+  +  +   +L     ++   + NRR++  +   +
Sbjct: 637 KVMEYLIGRDINPNRV-TLKAWGEQKLIDKRDNEKGRARNRRVECEIISSE 686


>gi|323344506|ref|ZP_08084731.1| OmpA family protein [Prevotella oralis ATCC 33269]
 gi|323094633|gb|EFZ37209.1| OmpA family protein [Prevotella oralis ATCC 33269]
          Length = 688

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 37/171 (21%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              L     +   + VL     +     +ID      +D   +   PE+   L ++ ++L
Sbjct: 489 KEELRADKTEESKEYVLQFPLASITAPVLIDN---IFYDFDKATLRPESTKALDELVKLL 545

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +    I +  H D   ++     N RLS  RA +    L+  G+++DR++ + G+   
Sbjct: 546 NENPNVTIELSAHCD---YKGSDEYNKRLSQQRANAVVAYLIDKGIAKDRLTPV-GYGKE 601

Query: 319 RLKI---------------ASDPMN--------------SANRRIDILVED 340
           + K                                      NRR + +V  
Sbjct: 602 KPKTIRKKLTEKYDWMKEGDVLTEAYIKKLDDKKQELCNQLNRRTEFIVLR 652


>gi|19881371|gb|AAM00928.1|AF491820_1 hemagglutinin antigen [Avibacterium paragallinarum]
 gi|19881381|gb|AAM00933.1|AF491825_1 hemagglutinin antigen [Avibacterium paragallinarum]
 gi|19881383|gb|AAM00934.1|AF491826_1 hemagglutinin antigen [Avibacterium paragallinarum]
 gi|38385761|gb|AAR19399.1| hemagglutinin antigen [Avibacterium paragallinarum]
 gi|89147814|gb|ABD62756.1| hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 344

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 269

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 325

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 326 LIACLADDRRVEISVKGNE 344


>gi|294670740|ref|ZP_06735604.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307548|gb|EFE48791.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 278

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 23/153 (15%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLPETIVVLQKIG 256
            + +     +     ++ +     I++S        +F            +    L  + 
Sbjct: 126 ENAVCPPAQEQPAPAMMAQPQMQRIVLS-----ADALFAFDKGDLAHMNAQGKAELDDVA 180

Query: 257 EVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             L      + + I GHTD   +      N RLS  RA +    L+  GV  + +    G
Sbjct: 181 AKLGRLERLDQVRIIGHTD---YLGSDSYNMRLSQQRAETVRNYLISRGVPAN-VLYAYG 236

Query: 315 FAHHRLK--IASDPMNSA-------NRRIDILV 338
               +      +    +        NRR+++ V
Sbjct: 237 AGETQPVKQCDNRGNRAELIACLQPNRRVELEV 269


>gi|73667180|ref|YP_303196.1| OmpA/MotB domain-containing protein [Ehrlichia canis str. Jake]
 gi|72394321|gb|AAZ68598.1| OmpA/MotB domain [Ehrlichia canis str. Jake]
          Length = 162

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 12/117 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD   +        +L+K+ +     T    +  GHTD          N  L   R
Sbjct: 42  EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340
           A +    +++   S +    +             +S+P       + NRR+ I + D
Sbjct: 99  ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNRRVVITLTD 155


>gi|86144088|ref|ZP_01062426.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85829548|gb|EAQ48012.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 638

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 91/293 (31%), Gaps = 24/293 (8%)

Query: 68  YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127
           YF+  G+  +        +       +      S  +  T               +    
Sbjct: 349 YFSTDGRAGLGGLDVYVYDFESETLENVGAPVNSTKDDFTFIINSDTGKGFFASNRANDP 408

Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            ++  Y       E        D E  + L  +    ++++ +        + E     +
Sbjct: 409 LDDDIYSFIKAACESTLIVKVVDKETKEPLNGALVGIRNLDNDLIASGSAEAPEATYTFQ 468

Query: 188 RKK-------RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI----SIIDQRNTPM 236
             +       R +         L  + +++    V+ E       I     +    N   
Sbjct: 469 DPECGEEYFARAEMEGYMTDEKLVEIPSESSEVTVILELEPAVTAIPPSFDLGKLINPIY 528

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S   P+  V L KI E+L    E  I +R HTD+         N  LS  R  S 
Sbjct: 529 FDFDKSNIRPDAAVELAKIIEILKEYPELHIDVRSHTDSR---GNDAYNLALSERRNQST 585

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
              ++ + G++ +R+    G+   +L          +   +  NRR + +V+D
Sbjct: 586 IDYIVEEGGIARERL-SGRGYGETQLLNECSNGVDCTKEQHQLNRRSEFIVQD 637


>gi|325267033|ref|ZP_08133703.1| OmpA family protein [Kingella denitrificans ATCC 33394]
 gi|324981533|gb|EGC17175.1| OmpA family protein [Kingella denitrificans ATCC 33394]
          Length = 240

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARD 283
               +   +  +F        PE I  L ++   L   + +   + GHTD   F    + 
Sbjct: 99  RTETVSLNSNFLFGFDKDTLRPEAIETLNQLAARLGDSNVQSARVEGHTD---FMGSEQY 155

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRI 334
           N  LS  RA      L++ GV   +IS   G    + ++ +      N   RR+
Sbjct: 156 NQALSERRATRVANYLVERGVPASKISAA-GLGESQARMTASCQAEVNKLGRRV 208


>gi|24374288|ref|NP_718331.1| peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
 gi|24348826|gb|AAN55775.1|AE015714_2 peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
          Length = 177

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    E   VL+  G  L     V   I GH D          N  L  
Sbjct: 71  KEHIIYFDFDRSEVQTEYAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 127

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +    +      + NRR  ++
Sbjct: 128 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 176


>gi|291567193|dbj|BAI89465.1| OmpA/MotB domain protein [Arthrospira platensis NIES-39]
          Length = 285

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 7/240 (2%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T + + L      +  +YQ              +           +  +   +    +
Sbjct: 50  PNTSSEMPLTEQLLRRSPEYQPSFPASETPLTPTPTPPPTGLTPEVQQTLQPQLQQLQQD 109

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +        L         A   ++RLQ + +++ +  S   A+NI             
Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQL-TAPSSPEAENIPPPTPRTARSRSG 168

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I+   +  +F+  SS   P   V+L  +   L +    V+ + GHTD        + 
Sbjct: 169 NGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SGSRQQ 225

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           N  LS  +A +  Q L  +   +       G+   R  + +  D     NRRI++ +   
Sbjct: 226 NLVLSSAQAEAIVQYLSNAVDDQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITPP 285


>gi|237859129|gb|ACR23740.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
 gi|237859131|gb|ACR23741.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
          Length = 150

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E   +L      L A     + + G+TD          N  
Sbjct: 41  LQQRYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDER---GTPEYNIA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   GV   ++S +S +   +           + NRR
Sbjct: 98  LGQRRADAVANYLSAKGVQATQLSTVS-YGEEKPAELGHTEAAYAKNRR 145


>gi|154174442|ref|YP_001408069.1| putative chemotaxis protein MotB [Campylobacter curvus 525.92]
 gi|112802901|gb|EAU00245.1| putative chemotaxis protein MotB [Campylobacter curvus 525.92]
          Length = 366

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 112/332 (33%), Gaps = 32/332 (9%)

Query: 33  WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
           W + YAD M  L+  F+++       ++++      K+          K+    +  +  
Sbjct: 14  W-VSYADLMAGLLFVFMLLIGAIVVKYVLSQNTLADKEQAIILALANLKDEQGKNFTLDQ 72

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  +       D +++   + +   ++I +  QK +    EN     S +  +    +
Sbjct: 73  LNSALKNELAKISDENLNLKRSNDIFVIQIDALKQKLKQLIEENADANASIADLNASILS 132

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
              +      DL       +  N      L  ++        ++ R  +L + ++ T + 
Sbjct: 133 LNQKMIVLNDDLAARDSALEEANASNEKNLAKIAFLLEQVSAKEARYDELLRDLNVTKNR 192

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSSSIP----------LPE 247
           +     ++  +    +  +  SI    N+         +FDK  +              E
Sbjct: 193 IKNLTGIRVKVISELKDKLGGSIAIDPNSGALKLSSSVLFDKGKAELKEEVKEELKATLE 252

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE- 306
               +      ++ + + I I G TD+         N  LS  RAY+    +        
Sbjct: 253 KYFDVLLNDPQISKNIDQIMIEGFTDSD---GSYLYNLELSQRRAYAVMDFINSYNKDAR 309

Query: 307 -DRISKISGFAHHRLKI-ASDPMNSANRRIDI 336
             ++   SG +++ L +        A+RRI+I
Sbjct: 310 LQKLLVASGRSYNELIMRDGAEDKDASRRIEI 341


>gi|269964049|ref|ZP_06178354.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
 gi|269831190|gb|EEZ85344.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
          Length = 206

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 5/112 (4%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             +F   S    P     ++++ E L       SI  H  AS        N  LS  RA 
Sbjct: 81  RVLFANDSDEINPVFHRQIRQLSEFLNEYPS-TSIELHGYASKVGGST-HNLDLSKRRAN 138

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
           +    L+  G++ +R+ +I G+    L      +  ++ NRR+   V   +G
Sbjct: 139 NVRSALLGYGIAANRV-RIVGYGDTHLAQQGTDEVSHALNRRVTASVVGYKG 189


>gi|187735188|ref|YP_001877300.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187425240|gb|ACD04519.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 439

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 14/114 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F  +       +   LQ + E +   S + + I GHTD        R N  LS  RA +
Sbjct: 329 FFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDV---GSERYNQGLSERRAAA 385

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK------IASDP---MNSANRRIDILVE 339
               L++ GV  +RI    GF   + +         +        NRR ++ ++
Sbjct: 386 VKAQLVQFGVPAERIVT-KGFGKSQPRRTYSPTADEETRDEARKENRRAEMYLD 438


>gi|71733989|ref|YP_273664.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71554542|gb|AAZ33753.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 418

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +    +    V     +      
Sbjct: 51  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 110

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+     K     D    K    +   +   + +  +      K+  
Sbjct: 111 GAENSAPWYWPFGSKDKAQAKPDSVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 170

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 171 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 227

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 228 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 284

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 285 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 321


>gi|269965970|ref|ZP_06180062.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
 gi|269829366|gb|EEZ83608.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
          Length = 293

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++  N       +     +  S  D   T + +++        +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+ E
Sbjct: 199 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292


>gi|221209446|ref|ZP_03582427.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
 gi|221170134|gb|EEE02600.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
          Length = 159

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +  + + + G+TD          +  LS  R
Sbjct: 52  GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GADGYDLELSRRR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G   H     +      + NRR  I+V  R
Sbjct: 109 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 159


>gi|313886427|ref|ZP_07820146.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924108|gb|EFR34898.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
          Length = 647

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 34/139 (24%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           +Q +   +D   +   PE    L  +  +L  + EV   +  +TD    +     N +LS
Sbjct: 511 EQIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPEVRLELSSNTDR---KGSQAYNQKLS 567

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA------------------ 330
             RA S    L+  G++ DR+    G+   R  + +  M +                   
Sbjct: 568 QRRAQSVVDYLIAKGIAADRLEA-RGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTL 626

Query: 331 -----------NRRIDILV 338
                      NRR +  V
Sbjct: 627 TEEQQIVCDQLNRRTEFTV 645


>gi|167623623|ref|YP_001673917.1| peptidoglycan-associated lipoprotein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353645|gb|ABZ76258.1| Peptidoglycan-associated lipoprotein [Shewanella halifaxensis
           HAW-EB4]
          Length = 179

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 7/156 (4%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             +        +   S   +  V    V  VL    +  +    + + +   FD   S  
Sbjct: 27  ESETDATSSTESSSSSEYANNGVETGGVAPVLTPEEQQRLKYQELRKEHIIYFDFDRSSV 86

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   VL   G+ L       + I GH D          N  L   RA +  + L   G
Sbjct: 87  SQQFAEVLSAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 143

Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           V   ++  +  +   +    +      + NRR  ++
Sbjct: 144 VQPSQM-SVVSYGEEKPMDFTRSDEGFAKNRRAVLV 178


>gi|19881367|gb|AAM00926.1|AF491818_1 hemagglutinin antigen [Avibacterium paragallinarum]
 gi|19881373|gb|AAM00929.1|AF491821_1 hemagglutinin antigen [Avibacterium paragallinarum]
 gi|19881385|gb|AAM00935.1|AF491827_1 hemagglutinin antigen [Avibacterium paragallinarum]
          Length = 341

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
                   ++       +   F    +   PE   VL  I   +A      + + G+TD 
Sbjct: 207 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 266

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330
                    N +LS  RA +    L+  GV+++ IS  +G+           D +     
Sbjct: 267 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 322

Query: 331 -------NRRIDILVEDRQ 342
                  +RR++I V+  +
Sbjct: 323 LIACLADDRRVEISVKGNE 341


>gi|532658|gb|AAA99311.1| antigen [Treponema pallidum]
          Length = 416

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L   + D  +       T  G+ ISI        FD  S+   P     L+KI E+L  
Sbjct: 281 ELQETLKDLHMPDAKVRETEEGVTISI----ENVQFDADSASLAPSEYEKLRKIAELLRA 336

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  + + GH +        +D  R+S +RA    + L + GV +       G    + 
Sbjct: 337 FPDRELLVSGHAERR---GSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQS 393

Query: 321 KIASDPMNSA--NRRIDILVEDR 341
              +D  +    NRR++I +  +
Sbjct: 394 IAPNDSEDGRRKNRRVEITIISK 416


>gi|126463889|ref|YP_001045002.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105700|gb|ABN78230.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 453

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 80/234 (34%), Gaps = 13/234 (5%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + + +  +++      +   + +  +        + S + + L     L     +   + 
Sbjct: 225 VAAPDAPRRFAVPVWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPAERAALFR 284

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
            P  +      ++ +  + +L     +      A  +            + I  +   + 
Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289
            +F  + +   P+   ++  +  VLA +      + + GHTD  P    N    N  LS 
Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            RA +   +L++ GV    I    G A       +      + NRR++I +E R
Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452


>gi|291617209|ref|YP_003519951.1| YiaD [Pantoea ananatis LMG 20103]
 gi|291152239|gb|ADD76823.1| YiaD [Pantoea ananatis LMG 20103]
          Length = 405

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + L DL ++++  ++    +     V      + ++I         +F +  ++  P   
Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L ++   +      I +   TD  P        ++  S  RA S  Q+L    +++  
Sbjct: 301 AILARVSSAMKDVKGTILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQ-LADTH 359

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + +  G       + +D     + NRR++I +
Sbjct: 360 VIRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391


>gi|268679844|ref|YP_003304275.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617875|gb|ACZ12240.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 385

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 101/356 (28%), Gaps = 57/356 (16%)

Query: 33  WKIVYADFMTVLMAFFLVM---------WIINAT-------DDDTKKAIEQYFNPFGKNL 76
           W + YAD M  L+  F+++         +  +         D   K  +        K  
Sbjct: 14  W-VSYADLMAGLLFVFILLIGAIIIKYVYAQSDLSAIKTDLDAQKKALVMSEEELAQKKR 72

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
             A        +  +      +   + E ++K   D+ +   +       L      L  
Sbjct: 73  DVARISDKLIASEQKTLELTTLQARLQEELSKLKSDVILSEESLLAARALLAEKGKALEE 132

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +              ++     ++   E              +   +   + +  L    
Sbjct: 133 NDAKLELSAKEIESLKRLLLEVENERDESKGALMVTQNELSNTSNTLKLKQGELALLSQK 192

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------------------RNTPM 236
              +ST    + +++    +     TGI I ++ +                     +  +
Sbjct: 193 LLDTSTAHQRLVEDLNITKVRIKNLTGIRIKVVQELKSKLGQKINIDPNSGAIRLPSGIL 252

Query: 237 FDKSSSIPLPETIVVLQKIGEV----------LAHSTEVISIRGHTDASPFRNIARDNWR 286
           FD  S    PE    L++  +           +  + + I I GHTD+        +N  
Sbjct: 253 FDVGSYELKPEAKKQLKETLQPYLEVLLNDADIRDNIDHIMIEGHTDSD---GSYMNNLD 309

Query: 287 LSLDRAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDI 336
           LS  RAY+    +            R     G ++      +  +   N  RRI+I
Sbjct: 310 LSQKRAYAVMAFIYSWDESKNALLQRYISAIGRSYSDRIFKNG-LEDKNASRRIEI 364


>gi|163751264|ref|ZP_02158492.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
 gi|161328978|gb|EDQ00052.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
          Length = 277

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   S     +   + K+ E LA     E++ I  +TD+         N R+S  RA S
Sbjct: 172 YESGGSELTRFSKSQIAKVQEYLAYDSEIELVLIDAYTDSY---GGRSINQRVSEQRADS 228

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
                + +G+++DRI  + G    R   ++        NRR+ I +   
Sbjct: 229 VKNFFLSAGINQDRIHTV-GHGERRHVASNASIDERGRNRRVVIRISKP 276


>gi|284048599|ref|YP_003398938.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952820|gb|ADB47623.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 235

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 29/162 (17%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L  +  D   +G+         ++ I +     +F+   +    +    + K+ + L
Sbjct: 58  NQLLKDVGKDLQAQGLQVRIDTKQGVLRIPES---VLFESGEANIKEQGQAAVGKLSQSL 114

Query: 260 ---------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE--- 306
                      + E + I GHTD  P  N     NW LS  RA + +  LM++ V E   
Sbjct: 115 LKTMTRPEYREALETVFIEGHTDNVPIHNEFFQSNWELSTQRAINTWN-LMRNDVPEFNW 173

Query: 307 ------DRISKISGFAHHRLKIAS------DPMNSANRRIDI 336
                 + I   SG+A  R    +      +   +ANRRIDI
Sbjct: 174 LVNPRGEPIFSCSGYAETRPVRENGLDPNSEEGRAANRRIDI 215


>gi|332524606|ref|ZP_08400809.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
 gi|332107918|gb|EGJ09142.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
          Length = 240

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+      I  L  +   L  +      + GHTD          N  LS +RA + 
Sbjct: 138 FEPGSARLTDAGIERLDGLLAALNRAPARRFEVVGHTDD---AGPRDLNLALSRERAEAV 194

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              L+  GV+  RI ++ G         +      + NRRI++
Sbjct: 195 RAHLVARGVAAARI-EVRGAGPDEPAADNGTAAGRARNRRIEL 236


>gi|16127459|ref|NP_422023.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|221236272|ref|YP_002518709.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
           NA1000]
 gi|13424913|gb|AAK25191.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|220965445|gb|ACL96801.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
           NA1000]
          Length = 188

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 7/112 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +   +++  +   FD    +   +   VL    + L   +   I I G+ D         
Sbjct: 70  VQDFVVNIGDRVYFDTDEYVIRADAQPVLAGQAQWLNRYSSVRIRIEGNADER---GTRE 126

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
            N  L   RA +    L+  GVS  RI  IS F   R           + NR
Sbjct: 127 YNLALGARRANAVRDFLIAQGVSSARIETIS-FGKERPIDPGSSEEAWAKNR 177


>gi|115359182|ref|YP_776320.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115284470|gb|ABI89986.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 170

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289
                +FD       P+   ++++IG  L  +    + + G++D          +  LS 
Sbjct: 61  SSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTVAYDRELSR 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
            RA      L+  G+   R+  + G         +      + NRR  I+V  R
Sbjct: 118 RRAEVVAIELVDVGLDGKRV-AVIGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170


>gi|317402072|gb|EFV82666.1| hypothetical protein HMPREF0005_00359 [Achromobacter xylosoxidans
           C54]
          Length = 495

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 26/134 (19%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH------------------STEV 265
           + +SIID+     F   S+I  P+    +  + +                      +   
Sbjct: 96  LSVSIIDKGEQ--FAPGSAILTPQAAKAMADLADTYRDVAAASASAKDRDAVNARNNAMR 153

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           I + GHTD +     ++ N  LS  RA +  ++ +  G   D+I    G         + 
Sbjct: 154 ILLVGHTDDT---GSSQLNADLSEARARAVAKIFVSRGFRADQIF-YQGAGETLPIADNH 209

Query: 326 PM--NSANRRIDIL 337
                + NRR++++
Sbjct: 210 SAAGRARNRRVEVV 223


>gi|260767963|ref|ZP_05876897.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           furnissii CIP 102972]
 gi|260615993|gb|EEX41178.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           furnissii CIP 102972]
          Length = 227

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 9/121 (7%)

Query: 226 ISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIAR 282
           I+  + R+T + F              L+ +   +A       + I GHTD         
Sbjct: 93  ITFTEARDTSLYFASGQQSLSAAQQRTLRDLISYVARDKRVTHLLIDGHTDNV---GSRL 149

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            N  +S  RA     VL   GV+ D+I +I          ++      + NRR+ I +  
Sbjct: 150 ANLSVSRSRAEQVAAVLETLGVAADKI-QIRAHGSRYPVASNATESGRAQNRRVVIRLVR 208

Query: 341 R 341
            
Sbjct: 209 D 209


>gi|84501388|ref|ZP_00999593.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
 gi|84390679|gb|EAQ03167.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
          Length = 192

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 14/171 (8%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKK-------ISSTLSGLVADNIVKGVLFETTRTGILISI 228
           P  ++    +    + L+ L +K       ++ T     A N           T +  + 
Sbjct: 22  PVAAQSNDASEMSAEELETLFQKQKTRGLVLAPTNQEDAAANTADTAPEAQDSTYVEFAP 81

Query: 229 IDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
            DQ N    FD  S+    +    L  + +V+  +      I GHTDA      A  N R
Sbjct: 82  EDQVNIQISFDFDSAALRDDQKPKLATLCQVMKSADIGTFRIIGHTDA---SGSASYNER 138

Query: 287 LSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           LSL RA    + L    G+ E R+  + G         +DP   ANRR++ 
Sbjct: 139 LSLLRAEEVKRYLSGDCGIEEQRLEAV-GVGEQFPLDKADPRGDANRRVEF 188


>gi|332993882|gb|AEF03937.1| peptidoglycan-associated lipoprotein [Alteromonas sp. SN2]
          Length = 188

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 7/161 (4%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
           P   +      +  +      +      +  V     + +          +  +    T 
Sbjct: 26  PSEEELAAERNRLAQEQAQAEQDARQAEAQRVEAEAAQRMKRSEEMVQQEMEALKNEQTV 85

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   +   PE   +L K    L  + +  ++I GHTD+         N  L   RA S
Sbjct: 86  YFDFDRASIKPEFQRLLDKHAAFLVKNPSTKVTIEGHTDSR---GTPEYNIALGERRAQS 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
               LM +GVS  +I+ +S +   +  +        + NRR
Sbjct: 143 VETYLMNAGVSSSQITVVS-YGEEKSAVMGSTEYAFAQNRR 182


>gi|326798576|ref|YP_004316395.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326549340|gb|ADZ77725.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 462

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS+    +   L ++   L  S   +++ G+            N++L LDRA S  
Sbjct: 363 FEFDSSVLKTSSYPTLDQVSSDLRASGATLTLEGNASEE---GTTEYNYQLGLDRANSVK 419

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             L+ SGV+  +I+ +S     +   ++        NR +  
Sbjct: 420 NYLVNSGVAASQINVVS-NGETKPVASNATEEGRQLNRNVQF 460


>gi|218462138|ref|ZP_03502229.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
          Length = 386

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASP--FRNIAR 282
           ++      +F  +          ++  I  VL  +      I+I GHTD  P    N   
Sbjct: 229 LLQSSTPELFQSARPELTKSFEPLVASIAAVLKQNAELIGGITITGHTDNVPLQASNPLS 288

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
           +N RLS  RA +   +L  SGV   ++    G A  +    +D     +ANRRI+
Sbjct: 289 NNQRLSEARAATIASLLAASGVPTGQLKS-QGRAATQPLAGNDSREGRAANRRIE 342


>gi|59711533|ref|YP_204309.1| flagellar motor protein MotY [Vibrio fischeri ES114]
 gi|59479634|gb|AAW85421.1| flagellar motor protein MotY [Vibrio fischeri ES114]
          Length = 292

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
              Q   + I   LS ++       V        +  S  D   T + FDK+S      +
Sbjct: 139 ADWQSPKQMIEVALSPVLFQE-QYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKAS 197

Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + +      +++ +  +TD+         N ++S  RA          G+  
Sbjct: 198 KKRLSQIADFIKYTKDVDLVLVATYTDS---SGGKNVNQQVSERRALKLQNYFESIGLPA 254

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           DRI ++  +   R    +      + NRR+ I +
Sbjct: 255 DRI-RVHSYGERRPIADNATPIGKNKNRRVVISL 287


>gi|260773224|ref|ZP_05882140.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
           CIP 69.14]
 gi|260612363|gb|EEX37566.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
           CIP 69.14]
          Length = 325

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 7/159 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +SS L     +     V      +   I+            +S    
Sbjct: 171 QDWQSRDQRIEVMLSSVLFQPQYNVFSDCVANLLPYSFEDIAFTILHYD---RGNSVELN 227

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I + + ++ ++  +   T              LS  RA S  +     G+ 
Sbjct: 228 KASQKRLAQIADYIRYNQDIDLVLVATYTDTSEGRNES-QSLSERRAESLQRYFRTLGLP 286

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 287 EDRI-QVQGYGQRRPIADNASPIGRDKNRRVVISLGRTQ 324


>gi|186477671|ref|YP_001859141.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184194130|gb|ACC72095.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 590

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 62/226 (27%), Gaps = 23/226 (10%)

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
           ++ +       ++  L     +   +  +     +                +  +  P  
Sbjct: 376 DESRNAADWLPHLDALMPLLATPGAEMKIDGTRVELSGAAADAKAGWLDRLQSLFGAPYQ 435

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +    A       Q       S L+   +      +                     F 
Sbjct: 436 VRVFDPAQAVADAAQSFRNAARSLLAPGASCATTDLLKTL------------NLQVVNFA 483

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDRAY 293
            S +         L +  ++L    +        + G++D          N  LS +RA 
Sbjct: 484 SSDAHVPQSAFDDLGQSAKLLQACAKSGHALKLEVAGYSDNV---GSESANRELSKERAD 540

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           +    L+K+GV  D +    G+ + R   ++   +    NRRI+  
Sbjct: 541 AVRAFLVKAGVPADALIA-RGYGNVRAVASNATESGRFANRRIEFT 585


>gi|194290406|ref|YP_002006313.1| colicin transport component, peptidoglycan-associated outer
           membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
 gi|193224241|emb|CAQ70250.1| colicin transport component, peptidoglycan-associated outer
           membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
          Length = 169

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    P+   +L    + L  +      I+G+TD       +  N  L   
Sbjct: 64  KRSVYFDFDSYTVKPDYQGMLGAHAKYLGTNQGRKILIQGNTDER---GTSEYNLALGQK 120

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GV + ++  +S     + K     +   + NRR DI
Sbjct: 121 RAEAVRRSLASMGVPDSQMEAVS-LGKEKPKATGHDEASWAENRRADI 167


>gi|327393665|dbj|BAK11087.1| flagellar motor protein YiaD [Pantoea ananatis AJ13355]
          Length = 405

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + L DL ++++  ++    +     V      + ++I         +F +  ++  P   
Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L ++   +      I +   TD  P        ++  S  RA S  Q+L    +++  
Sbjct: 301 AILARVSSAMKDVKGTILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQ-LADTH 359

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           + +  G       + +D     + NRR++I +
Sbjct: 360 VIRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391


>gi|257091687|ref|YP_003165328.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044211|gb|ACV33399.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 202

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P +   L +I ++L+ + +  I + GHTDA      A  N  LS DRA S 
Sbjct: 100 FRPGSANITPASGNTLIEIAKILSLTPDRCIIVEGHTDAE---GNADRNMALSRDRANSV 156

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            + +   G  E R     G          DP +S NRR+   V
Sbjct: 157 VKFISDKGAVERRRLVPVGKGSTDPLKDLDPRDSRNRRVVFKV 199


>gi|146281586|ref|YP_001171739.1| outer membrane protein [Pseudomonas stutzeri A1501]
 gi|145569791|gb|ABP78897.1| probable outer membrane protein [Pseudomonas stutzeri A1501]
          Length = 343

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  S           L  I + L        I + GH+D          N  LS  RA +
Sbjct: 224 FPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDN---SGNRLVNRDLSRRRALA 280

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
             + L+ +GV E +I  +         +A+      + NRR+
Sbjct: 281 VQEYLIANGVPEQQI-TVRFHGERYPLVANSSEANRAKNRRV 321


>gi|157964921|ref|YP_001499745.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
           massiliae MTU5]
 gi|157844697|gb|ABV85198.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
           massiliae MTU5]
          Length = 164

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA + 
Sbjct: 62  FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GAKEYNIGLGERRAAAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 119 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 162


>gi|149911636|ref|ZP_01900247.1| OmpA family protein [Moritella sp. PE36]
 gi|149805306|gb|EDM65320.1| OmpA family protein [Moritella sp. PE36]
          Length = 211

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 9/184 (4%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            E              +       +      D A  + +     +   +   V       
Sbjct: 20  AEIQAKAAAPSTPTETTVMPKQMAQENDLSDDDADGVIAYREQCLNSVLGSQVNNSGCGG 79

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
             +  +  Q     F  +S++  P     ++ +   + H  +  + I GH+        A
Sbjct: 80  DTVNKVR-QELKVNFSNNSAVISPRYFADIKALSNFMQHYPDLDVVIEGHSSRQ---GSA 135

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
             N  LS  RA +   +L+   G+S  R+S I G+   RL     +   +  NRRI   +
Sbjct: 136 ALNMDLSQRRAQAVMDLLINKFGISTSRVSAI-GYGFERLLDEGNNSYAHQRNRRIVAEL 194

Query: 339 EDRQ 342
               
Sbjct: 195 SGDN 198


>gi|157377275|ref|YP_001475875.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157319649|gb|ABV38747.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 201

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S    P+    ++ I   +      + +I GH   +        N  LS +RA +
Sbjct: 78  LFANDSYYIDPQYYDQIEVIATFMTDYPNTVVTIEGHCSKT---GSYDHNLTLSQNRANA 134

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
               L +  G++ DR++ I G++  R    S+   +   NRR+
Sbjct: 135 VTTTLTEQFGINPDRLTAI-GYSFDRPVDMSETSIAHTRNRRV 176


>gi|325277836|ref|ZP_08143389.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324097047|gb|EGB95340.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 830

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 18/293 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              ++Q       + +T +  +       +R+++    +S  + +   ++     + +  
Sbjct: 540 FTTLQQVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGVDSVEAEALPHDNRAQSIA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL--- 178
              +   +    LS +Q+ +     L            +     S+++            
Sbjct: 600 DFGKATLDTYVMLSPAQREKADPAFLKAHLPDYWYPAIARHTGHSLSEANQGKGDQDYLY 659

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +  +I     + R  D+ + + +      + N +  +  ++ R    I++          
Sbjct: 660 ASRQITFYADQIRETDVPRILDNAFLISSSRNYIDSLRAQSLRAIETITLESDTLFAFGR 719

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
                   E    L  I   L ++  +  I I GH D       ++ N ++S  RA +  
Sbjct: 720 ADFQSLKSEGQNQLSAIASKLLNTPNIGKIVISGHADQL---GDSQSNLQVSKQRAQTIR 776

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
             L+  GV  + +    G    +  +  D   +          NRR++I V  
Sbjct: 777 TYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQARAQLIKCLEPNRRVEIEVRG 828


>gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 369

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 303 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 361

Query: 339 EDRQ 342
           +  +
Sbjct: 362 QGAK 365


>gi|74318223|ref|YP_315963.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057718|gb|AAZ98158.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
           denitrificans ATCC 25259]
          Length = 188

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
            + +  FD  S +   E   VL+     LA      I+++G+ D          N  L  
Sbjct: 79  SKRSVFFDFDSFVVKDEYRPVLEAHAGYLASKRDARITLQGNADER---GSREYNLALGQ 135

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GVS+ ++  IS F   + +  +D     + NRR DI+
Sbjct: 136 KRAEAVRKALAVLGVSDAQMEAIS-FGEEKPRNEADTEEAYAENRRTDIV 184


>gi|124266540|ref|YP_001020544.1| putative peptidoglycan-associated lipoprotein [Methylibium
           petroleiphilum PM1]
 gi|124259315|gb|ABM94309.1| putative peptidoglycan-associated lipoprotein precursor
           [Methylibium petroleiphilum PM1]
          Length = 179

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +   E   ++    +VL     + + I GHTD          N  L   RA 
Sbjct: 76  VYFDFDSFLVKDEYRPIVDNYSKVLNSDRKKRVVIEGHTDER---GGREYNLALGQKRAE 132

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           +  + L   GV + +I  +S +   R  +  + +   + NRR ++
Sbjct: 133 AVAKSLTLLGVQDGQIESVS-YGKERPAVTGSDEAAWAKNRRAEL 176


>gi|310819072|ref|YP_003951430.1| outer membrane domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392144|gb|ADO69603.1| Outer membrane domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 480

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 13/213 (6%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
               +          +   S + +   K + +++  + E    L         A      
Sbjct: 262 GPGLSGAPGAPRFRIVAGVSFRSEPPPKLSFMDEHADNELQLTLAQAKPSSEEARVLPVS 321

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             +         +G   D   + +          + +    +   F + SS   P  + +
Sbjct: 322 TWEFNALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIH---FVRGSSEL-PGVVPL 377

Query: 252 LQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L ++   L+  +    I I GH D          +  +SL RA +  + L+  GV   ++
Sbjct: 378 LDQVILQLSGFSAGGTIVIEGHADTE---GTDTSDMFMSLRRAQAVRRYLIDQGVPGTKV 434

Query: 310 SKISGFAHHRLKIA---SDPMNSANRRIDILVE 339
            +I G   H    +   ++  +  NRR ++LV 
Sbjct: 435 -RIRGLGSHWPVSSKPATEQEHQLNRRAEVLVL 466


>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 371

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 248 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 304

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 305 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 363

Query: 339 EDRQ 342
           +  +
Sbjct: 364 QGAK 367


>gi|301166059|emb|CBW25633.1| peptidoglycan-associated lipoprotein precursor [Bacteriovorax
           marinus SJ]
          Length = 169

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F  +SS+        L    E L  +    I + GH D        + N  L   R
Sbjct: 62  KTVFFGFNSSVLSTSARETLNANAEFLKANPSVEIQVEGHCDER---GGVQYNLALGERR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
           A +    L+  GV+  RIS IS F   R       +   ++NRR + ++  +
Sbjct: 119 AVAVKDHLVAMGVNSSRISTIS-FGKERPVAFGHDESAWASNRRGNFIITAK 169


>gi|212634139|ref|YP_002310664.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212555623|gb|ACJ28077.1| OmpA [Shewanella piezotolerans WP3]
          Length = 187

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ + S  L     VL++I   L      + + G+TD+         N RLSL RA S  
Sbjct: 85  FEFAKSEILSSQRAVLERISAWLTQVPARLLLVGYTDSI---GGEAFNHRLSLLRAKSVK 141

Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           Q L+ +     +R   I G         +      + NRR++  V
Sbjct: 142 QALITEFNFEPERFD-IKGVGSQAPIANNRTGSGRALNRRVEFYV 185


>gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 368

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360

Query: 339 EDRQ 342
           +  +
Sbjct: 361 QGAK 364


>gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 368

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360

Query: 339 EDRQ 342
           +  +
Sbjct: 361 QGAK 364


>gi|269976278|ref|ZP_06183274.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
 gi|269935607|gb|EEZ92145.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
          Length = 325

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 7/187 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              ++ +        +        E+I AM     L  + +++   L+          + 
Sbjct: 77  SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              T  G+++ ++       F    +   P    VL  +  VLA + E ++I G+ D +P
Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLAGTPEDVAIEGYADPNP 191

Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334
            +      N+ L+  RA      L   GV   ++  IS  A H+    A     S NRR+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251

Query: 335 DILVEDR 341
           DI++  R
Sbjct: 252 DIVIMSR 258



 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 56/205 (27%), Gaps = 6/205 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK      P N   W + Y D +TV+M  FLV++ I+  D      + +         + 
Sbjct: 3   KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +         S               + +     +   + +  +      +L+  +
Sbjct: 63  VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q      +    +   +       L   +   + YF P  ++ +  A      L  +   
Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAG 176

Query: 199 ISSTLSGLVADNIVKGVLFETTRTG 223
               ++     +       +     
Sbjct: 177 TPEDVAIEGYADPNPQYSAKYPSNY 201


>gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus
           pleuropneumoniae L20]
 gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 368

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360

Query: 339 EDRQ 342
           +  +
Sbjct: 361 QGAK 364


>gi|330719944|gb|EGG98406.1| General secretion pathway protein A [gamma proteobacterium
           IMCC2047]
          Length = 141

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
           +R+T  +    +   PE +  L  I   +      + + + GHTD+         N R+S
Sbjct: 31  ERSTIFYASGRTKLAPEVLEQLDLIIRYVKADKRIKRVVVDGHTDS---AGDKESNIRVS 87

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             RA        K+G+S  RI  +          A+D     + NRR+ I ++ 
Sbjct: 88  KQRANLVVAYFKKAGISSKRIV-MRWHGDRYPTAANDTDEGQARNRRVTIRLDR 140


>gi|330807890|ref|YP_004352352.1| hypothetical protein PSEBR_a1170 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375998|gb|AEA67348.1| Conserved hypothetical protein; putative outer membrane protein,
           putative OmpA family [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 370

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 12/262 (4%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           D +      S    D  + +     +         Q K          + S+       K
Sbjct: 25  DAEGGSSWWSFGSSDKVVAKDTAPAAPLKPAAVAPQAKAESATHWWWPFSSDDAADVAKK 84

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
           + +    +           E   N +  +      +E   A+      +     +     
Sbjct: 85  DDVKPQDKPEAKAPAVAKAEAESNGKWWWPFGGKDQETAKAVP-MPDPKVTQAWLDDYEP 143

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVL-AHS 262
            L        +  E     ++++         F+      L P T+    ++ ++L A  
Sbjct: 144 KLRTAIQDSKLQLERRDNVLVVT---APVDGSFNPDRPAMLLPVTLGPFTRVAKILEADP 200

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              + I GH D       A  N +LS +RA S   +   SG+  DR+  + G      + 
Sbjct: 201 KTAVLILGHADT---SGAAPANLKLSQERAQSVAAIFRLSGLQRDRLM-LRGMGAVAPRA 256

Query: 323 ASDP--MNSANRRIDILVEDRQ 342
           A+D     + NRR+++LV    
Sbjct: 257 ANDSVEGRALNRRVELLVTPAN 278


>gi|78186499|ref|YP_374542.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
 gi|78166401|gb|ABB23499.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
          Length = 171

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               ++  SS    +    LQ+    +  +      I GH D       +  N  L   R
Sbjct: 66  GDVFYEFDSSELAADAQTQLQQNASWMNSNAAASTMIEGHCDER---GTSEYNIALGERR 122

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
           A +A + +++ GV   RI  +S +   +   A     +   NRR   +++
Sbjct: 123 ASTAKEYIVRLGVPSSRIETVS-YGEEKPFAAGHDEAAWSKNRRAHFILK 171


>gi|325105157|ref|YP_004274811.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324974005|gb|ADY52989.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 587

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 89/286 (31%), Gaps = 22/286 (7%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           G ++   S+                I  +       +     +G+T      +  + +  
Sbjct: 303 GVSVFIKSETGTWNFLTDVNGEIPIIKNAKRAIYFMSGSKNSVGTTTASIAEKDFDEDSE 362

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            +         + +L  ++   KD  K  ++  ++    N        +       +   
Sbjct: 363 LIYRELLHNDPRFTLVGETVSQKDDSKLPNINTALTNLTNSTTRSQISDTEAKFAYQLAP 422

Query: 193 QDLAKKISSTL---SGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-------DKSSS 242
           +     ++      S     +       ET    + + + D      F       D   S
Sbjct: 423 ESDYSVVAHQFGKFSQTEKVSTKGLDRSETFYVKLKLPVGDIETGKTFVLKDIHYDFDKS 482

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              P+  ++L  +  ++  +    I +  HTD          N  LS  RA SA   +++
Sbjct: 483 NIRPDAALILDNVVSIMKQNPSLKIELSSHTDCR---GNNAYNLILSDARARSAVAYIVR 539

Query: 302 SGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           +G+ ++R+    G+   +L          S+  +  NRR ++ V  
Sbjct: 540 NGIEKNRLVA-KGYGETKLLNNCYDGVRCSEVEHQRNRRTELRVLK 584


>gi|257460460|ref|ZP_05625561.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268]
 gi|257441791|gb|EEV16933.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268]
          Length = 340

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 114/325 (35%), Gaps = 42/325 (12%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++             I +YF          S+      +   +
Sbjct: 12  W-IAYADLMAGLLFVFVLLVG---------GIIVKYFLTQSNLQEKESQISSALASLQSQ 61

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
             ++    ++++  +     L I +T+ +KQ       I  L+     +  K +L  +S 
Sbjct: 62  EKKSAELEALNKIFSDQLEKLNIENTDLRKQNSIYFIQIEDLTE-MAEKLKKENLDINSL 120

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST------LSGL 206
             K    +         +  + L  L+K++    K  + L     +I +       +   
Sbjct: 121 LQKAREDANATISQNELKIAFLLDQLTKKESDFNKILQDLNVTKNRIRNLTGMKVKIIAD 180

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IG 256
           + + +   +  +     + +S     ++ +FDK SS         L+             
Sbjct: 181 LKEKLGGKIRIDNESGAMTLS-----SSILFDKGSSELKEGAKETLRSTLQSYFAALLNN 235

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKISG 314
           + +  + + I I GHTD+         N  LS +RA++    +      E   +    SG
Sbjct: 236 DEIRENLDQIIIEGHTDSD---GGYLYNLELSQNRAFAVMDFINSWNKDERLQKYLIASG 292

Query: 315 FAHHRLKIA---SDPMNSANRRIDI 336
            ++ +  +     D   S  RRI+I
Sbjct: 293 RSYTQPVMRRGVEDKDAS--RRIEI 315


>gi|261868491|ref|YP_003256413.1| peptidoglycan-associated lipoprotein [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293390507|ref|ZP_06634841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|62548396|gb|AAX86841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
           actinomycetemcomitans]
 gi|261413823|gb|ACX83194.1| peptidoglycan-associated lipoprotein [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951041|gb|EFE01160.1| peptidoglycan-associated lipoprotein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 155

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E   +L      L  +    + + G+TD          N  
Sbjct: 46  LQQRYNTVYFGFDKYDIEGEYTQILDAHAAYLNATPATSVRVEGNTDER---GTPEYNMA 102

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           L   RA +    L   GV   +IS +S +   +  +    +   + NRR
Sbjct: 103 LGERRARAVQNFLTAKGVKAGQISTVS-YGEEKPAVLGHDESAYAKNRR 150


>gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
 gi|60681448|ref|YP_211592.1| OmpA family membrane protein [Bacteroides fragilis NCTC 9343]
 gi|253566855|ref|ZP_04844307.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
 gi|265763283|ref|ZP_06091851.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
 gi|52216052|dbj|BAD48645.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
 gi|60492882|emb|CAH07657.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
           NCTC 9343]
 gi|251944418|gb|EES84907.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
 gi|263255891|gb|EEZ27237.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
 gi|301162908|emb|CBW22455.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
           638R]
          Length = 224

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  +SS     +   L +   +L       ++I GHTD          N ++S +
Sbjct: 108 PSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV---GSYEANQKVSAN 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RAY+    L   GV   +  K+ G  + +    S+     NRR++I +   +
Sbjct: 165 RAYAVENYLQACGVKPYQFKKVEGVGYSQ-YNESETPE-QNRRVEIFMYASE 214


>gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866]
          Length = 358

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGEANPV 326

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358


>gi|229844879|ref|ZP_04465017.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
 gi|229812260|gb|EEP47951.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
          Length = 355

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 17/166 (10%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +   +D    I S  +G+                 +  +     +   F    +   P+ 
Sbjct: 195 QNSTRDYNPWIGSINAGISYRFGQGEAPVVAAPEMVSKTFSLNSD-VTFAFGKANLKPQA 253

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
              L  +   ++      +++ G+TD          N +LS +RA S     +  GV+ D
Sbjct: 254 QATLNSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAAD 310

Query: 308 RISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
            IS  +G+           D +            +RR++I V   +
Sbjct: 311 AISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 355


>gi|170739237|ref|YP_001767892.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168193511|gb|ACA15458.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 227

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 13/221 (5%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           T     + R  +    L+          +L + +    D+ K+     +           
Sbjct: 2   TGSANTFSRRLSRAALLAGLLTLGSAAGALAQKAPSEADIAKALIGAPAEAPVATGPTRS 61

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           LS            L +    + S  +        +  L   +     I +        F
Sbjct: 62  LSTSVRGEAASAGALGEDRSFLDSLRNRASLTPSERSKLAAVSADKPSIDLEIP-----F 116

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           D +S+   P+ + +++ +G  LA          I GHTD    +   + N  LS  RA +
Sbjct: 117 DYNSAKIGPKALPMVKSLGAALARQELKGNTFLIVGHTD---GKGKDQANQALSERRAQA 173

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
               ++++ GV    +  + G+   +LK A++P    NRR+
Sbjct: 174 VKDYIVQNYGVPATNLVSV-GYGKTQLKDAANPNAPVNRRV 213


>gi|108760432|ref|YP_632749.1| peptidoglycan-associated lipoprotein (Pal) family protein
           [Myxococcus xanthus DK 1622]
 gi|108464312|gb|ABF89497.1| peptidoglycan-associated lipoprotein (Pal) family protein
           [Myxococcus xanthus DK 1622]
          Length = 171

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
             +   F+  S+   PE+  +L ++   L       +++ GHT           N  L  
Sbjct: 63  SADPVYFELDSATLRPESRDMLAQLATGLRERPLTRVTVSGHTCEL---GTTEYNIALGH 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA      L   GV   ++S +S F   R    +   ++   NRR +  
Sbjct: 120 RRAAVVRDYLRNLGVESSQLSIVS-FGEERPLSDAHTEDALRRNRRAEFT 168


>gi|115372572|ref|ZP_01459880.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370534|gb|EAU69461.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 490

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 13/213 (6%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
               +          +   S + +   K + +++  + E    L         A      
Sbjct: 272 GPGLSGAPGAPRFRIVAGVSFRSEPPPKLSFMDEHADNELQLTLAQAKPSSEEARVLPVS 331

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             +         +G   D   + +          + +    +   F + SS   P  + +
Sbjct: 332 TWEFNALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIH---FVRGSSEL-PGVVPL 387

Query: 252 LQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L ++   L+  +    I I GH D          +  +SL RA +  + L+  GV   ++
Sbjct: 388 LDQVILQLSGFSAGGTIVIEGHADTE---GTDTSDMFMSLRRAQAVRRYLIDQGVPGTKV 444

Query: 310 SKISGFAHHRLKIA---SDPMNSANRRIDILVE 339
            +I G   H    +   ++  +  NRR ++LV 
Sbjct: 445 -RIRGLGSHWPVSSKPATEQEHQLNRRAEVLVL 476


>gi|85716801|ref|ZP_01047768.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85696408|gb|EAQ34299.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 214

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD  S+   P T   L  +G+ L        VI + GHTD    +     N  LS  RA 
Sbjct: 103 FDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTD---GKGSDAYNHNLSERRAE 159

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + LM+   +    +  + G+     K ++DP    NRR++++
Sbjct: 160 AVKRFLMERYKIPAANLVAV-GYGKEGYKNSADPFAPENRRVEVV 203


>gi|103488202|ref|YP_617763.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98978279|gb|ABF54430.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 294

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++   +    L             +  + G+TD++        N  LS  RA + 
Sbjct: 183 FDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDST---GSQEFNQMLSEKRAGAV 239

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
              L ++ G    R+   +G A       ++     + NRR+ + V   +G
Sbjct: 240 VNHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKG 290


>gi|227876751|ref|ZP_03994860.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
 gi|306817698|ref|ZP_07451440.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
 gi|227842648|gb|EEJ52848.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
 gi|304649512|gb|EFM46795.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
          Length = 325

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 7/187 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              ++ +        +        E+I AM     L  + +++   L+          + 
Sbjct: 77  SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              T  G+++ ++       F    +   P    VL  +  VLA + E ++I G+ D +P
Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLAGTPEDVAIEGYADPNP 191

Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334
            +      N+ L+  RA      L   GV   ++  IS  A H+    A     S NRR+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251

Query: 335 DILVEDR 341
           DI++  R
Sbjct: 252 DIVIMSR 258



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 56/205 (27%), Gaps = 6/205 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK      P N   W + Y D +TV+M  FLV++ I+  D      + +         + 
Sbjct: 3   KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +         S               + +     +   + +  +      +L+  +
Sbjct: 63  VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           Q      +    +   +       L   +   + YF P  ++ +  A      L  +   
Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAG 176

Query: 199 ISSTLSGLVADNIVKGVLFETTRTG 223
               ++     +       +     
Sbjct: 177 TPEDVAIEGYADPNPQYSAKYPSNY 201


>gi|257092704|ref|YP_003166345.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045228|gb|ACV34416.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 221

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A K     +     +   +   +              +G  I++       +FD + 
Sbjct: 56  PAAAAKDPAGCKCDKDLLPKEVCEPMVAKAAPAAAPAAKPSGDKITVAAD---ALFDFNK 112

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   PE    L ++          + I  GHTD          N +LS  RA +  Q L+
Sbjct: 113 ATLRPEGKAKLDEVVAKAGAIKLEVIIAVGHTDRI---GSDAYNQKLSERRAAAVKQYLV 169

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDRQ 342
             G+  +R+    G          D                +RR+DI +   +
Sbjct: 170 SKGIDANRVYT-EGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIGTK 221


>gi|254507025|ref|ZP_05119163.1| outer membrane protein [Vibrio parahaemolyticus 16]
 gi|219550020|gb|EED27007.1| outer membrane protein [Vibrio parahaemolyticus 16]
          Length = 204

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 15/170 (8%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                ++   L D  K        L  +     ++        L +  +++   +F   S
Sbjct: 30  AAPVAEQIADLTDDDKDGVVNARDLCPNTPEGALVDNDGCGESLKNEEERQLRILFANDS 89

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
               P     ++ + E L       I I+G             N  LS  RA++    L+
Sbjct: 90  YEINPIFSDQIKTMAEFLQKYQSASIQIQGFASKV---GSPEYNLALSRKRAHAVQDELI 146

Query: 301 KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI--------DILVED 340
              V   R+  I G+   RL+     +  ++ NR++        +++VE+
Sbjct: 147 SFDVDPSRV-SIVGYGETRLEAEGDDETSHALNRKVTATVVGLSEVVVEE 195


>gi|304320241|ref|YP_003853884.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
 gi|303299143|gb|ADM08742.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
          Length = 175

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F+ +      E+I  L++    +    E  I + GH D          N  L   R
Sbjct: 65  NRVFFEYNEYALGQESIATLRRQAAWMKEYPEARIRLEGHADER---GTREYNLALGARR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332
           A +A   L+  G+   RI+ +S +   R           + NR
Sbjct: 122 ASAAKSYLVDLGIDPSRITTVS-YGKERPIDPRSTPEAWARNR 163


>gi|99082204|ref|YP_614358.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99038484|gb|ABF65096.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 167

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE  V+L      L  +   V++I GH D          N  L   R
Sbjct: 57  DRVLFLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADER---GTREYNLALGASR 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA   L+  GV+  RI  +S F   R     +       NRR
Sbjct: 114 ANSARDYLISKGVAASRIQTVS-FGKERPIEICSEQSCYEKNRR 156


>gi|34558375|ref|NP_908190.1| putative flagellar motor protein [Wolinella succinogenes DSM 1740]
 gi|34484094|emb|CAE11090.1| HYPOTHETICAL PROTEIN-PUTATIVE FLAGELLAR MOTOR PROTEIN [Wolinella
           succinogenes]
          Length = 261

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIAR-D 283
           I+      +F +           +  K    + +       + +RGHTD  P    A  D
Sbjct: 124 IVRLPAALLFKEGGIEVENSDGFLFVKRMAEIVNRLPKDVHVEVRGHTDTLPLPAQAPQD 183

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
              L+  RA S  ++L+K G+   RI+ + G         +    +   NRR+DI +  +
Sbjct: 184 KLELTAKRALSVSKLLVKEGIDPKRITTV-GRGDQDPLTHARTPEAQESNRRVDIYLYPK 242

Query: 342 Q 342
           +
Sbjct: 243 E 243


>gi|282848786|ref|ZP_06258180.1| OmpA family protein [Veillonella parvula ATCC 17745]
 gi|294795118|ref|ZP_06760253.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
 gi|282581500|gb|EFB86889.1| OmpA family protein [Veillonella parvula ATCC 17745]
 gi|294454480|gb|EFG22854.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
          Length = 345

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   +    L            + + + G+ D        + N  LS  R    
Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+  GVS DR+  I+     +    +      + NRR+D+ +  
Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345


>gi|269797531|ref|YP_003311431.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
 gi|269094160|gb|ACZ24151.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
          Length = 345

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   +    L            + + + G+ D        + N  LS  R    
Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+  GVS DR+  I+     +    +      + NRR+D+ +  
Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345


>gi|330998926|ref|ZP_08322653.1| putative outer membrane protein A [Parasutterella excrementihominis
           YIT 11859]
 gi|329576140|gb|EGG57659.1| putative outer membrane protein A [Parasutterella excrementihominis
           YIT 11859]
          Length = 212

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 23/160 (14%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++     L  +      + +       +++       +F  + ++  PE I  L K+   
Sbjct: 58  LAEAQGALGQNCQCDTDIIKCEAGAERVTLSADT---LFAFNKAVLKPEGIAKLTKLTSR 114

Query: 259 LAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           ++  + +V+ I G+ D       A  N +LS  RA +    L + GV   RI    G   
Sbjct: 115 MSGLTLDVVMINGYADRI---GGAAYNQKLSQRRADAVKTFLAEHGVPAARIHA-EGKGQ 170

Query: 318 HRLKI--ASDPMNSA-------------NRRIDILVEDRQ 342
               +   +                   NRR  I V+  +
Sbjct: 171 ADPVVNCPNPSAKGEIKTFKQLIECLQPNRRAVIEVKGTR 210


>gi|212712432|ref|ZP_03320560.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
           30120]
 gi|212684889|gb|EEB44417.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
           30120]
          Length = 165

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q NT  F        PE   +L      L  +    + + GH D          N  L  
Sbjct: 59  QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 115

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +    L   GVS D++S +S +   +  +        + NRR  I
Sbjct: 116 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 163


>gi|154174275|ref|YP_001408803.1| Omp18 [Campylobacter curvus 525.92]
 gi|112803716|gb|EAU01060.1| Omp18 [Campylobacter curvus 525.92]
          Length = 168

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNI 280
           ++ +I  Q     FD        +    +     +   +      I + G+ D       
Sbjct: 51  LIANIESQVKNVYFDFDKFNIKADQQGTVSANAAIFNQADAQALSIKVEGNCDEW---GT 107

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
              N+ L L RA S    L+++GVS DRI  +  F               + NRR +  V
Sbjct: 108 DEYNYALGLKRAKSTKDALVRNGVSADRI-AVVSFGESNPVCTDKTKACDAQNRRAEFKV 166

Query: 339 E 339
            
Sbjct: 167 L 167


>gi|86360406|ref|YP_472294.1| hypothetical protein RHE_PE00129 [Rhizobium etli CFN 42]
 gi|86284508|gb|ABC93567.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 653

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 68/257 (26%), Gaps = 14/257 (5%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
              + ++Q ++         +     K  +  +          + + +++   E   ++ 
Sbjct: 398 GQFQVNAQRRVAALRLAAAQEMMAANKPVTEYEPLLVAADSPQVLWQASATLGEIYFSAR 457

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                          ++      +      +S     A + +    +             
Sbjct: 458 RFADAAADYQQAIEIIKNETRTPKAPPAETISDLIQRAAQARILAANPTSDNPQGSFVPA 517

Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265
             +   GVL       +  I  +       FD   S          +++ E L       
Sbjct: 518 EKDHRSGVLGGIYSENVRGIVPVSIPVPITFDFDKSTFTSIGTEAAEELLEALKEQKPGR 577

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + + GHTD    +     N +LS  RA +    L   G+         G         + 
Sbjct: 578 VILIGHTDR---KGGDDYNQKLSERRAQAVADFLKNHGIDAT--IDAEGRGASEPVDVTA 632

Query: 326 PM-------NSANRRID 335
                    ++ NRR++
Sbjct: 633 TANLTEDDIDALNRRVE 649


>gi|327405082|ref|YP_004345920.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320590|gb|AEA45082.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 694

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D +S    P +  VL K+ E L  +  ++  I  HTDA         N  LS  RA S 
Sbjct: 562 YDFNSDKLRPASEAVLDKLLEFLELNNNIVVEINSHTDAR---GKDIYNLDLSQRRAKSC 618

Query: 296 YQVLMKSGVSEDRISKISGFAHHRL 320
              L+  G++ +R+    G+   + 
Sbjct: 619 VDYLVSKGITPERLIA-KGYGETQP 642


>gi|298565977|dbj|BAJ09608.1| hypothetical protein [Pasteurella pneumotropica]
          Length = 289

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 17/130 (13%)

Query: 224 ILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI 280
           + +  +D      F     +  LP     +++  + +     +    + GHTD       
Sbjct: 165 LAVESLDASALFGFNKSGYNDILPNGKEKIREFADKVKEMPSISKILVSGHTDPI---GS 221

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DP-MNSA-------N 331
              N  LS  RA +    L K+GVS     +  G+      + + D   ++        N
Sbjct: 222 TAYNQTLSQKRANTVKLALQKAGVSTP--IEAVGYGKAEPVVTTCDTYKDAQRNQCNQPN 279

Query: 332 RRIDILVEDR 341
           RR++I V  +
Sbjct: 280 RRVEIAVYGK 289


>gi|297380015|gb|ADI34902.1| flagellar motor protein MotB [Helicobacter pylori v225d]
          Length = 255

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K +          W + YADF+++L+A F+ ++ I+A +    +A++  F          
Sbjct: 3   KKSKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKP 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                    PP+   + +   S        + + K 
Sbjct: 63  EAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|261343491|ref|ZP_05971136.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
           4541]
 gi|282568637|gb|EFB74172.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
           4541]
          Length = 165

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q NT  F        PE   +L      L  +    + + GH D          N  L  
Sbjct: 59  QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 115

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +    L   GVS D++S +S +   +  +        + NRR  I
Sbjct: 116 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 163


>gi|209168782|gb|ACI42382.1| major outer membrane protein [Aeromonas hydrophila]
          Length = 344

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F        PE +  L  + + +           + G+TD          N +LS
Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337
             RA +    L+  G++  ++  + G         +               + +RR+++ 
Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKTQLISCLAPDRRVEVR 335

Query: 338 VEDRQ 342
           V   Q
Sbjct: 336 VSGVQ 340


>gi|288959276|ref|YP_003449617.1| outer membrane protein [Azospirillum sp. B510]
 gi|288911584|dbj|BAI73073.1| outer membrane protein [Azospirillum sp. B510]
          Length = 146

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S++  PE+  VL K+  V+  + T    I GHTDA         N  LS  RA + 
Sbjct: 44  FDFNSAVIKPESRAVLDKVAAVMTTAGTTRFRIVGHTDAV---GGDAANLALSKRRAAAV 100

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            + L  +  +  DR+ ++SG     L +   P  +ANRR++I+
Sbjct: 101 VEYLASRHRIQRDRL-EVSGMGARELLLPDQPTAAANRRVEII 142


>gi|295395643|ref|ZP_06805835.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971459|gb|EFG47342.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 563

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 20/287 (6%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           + +  +  P     M +              +    D   +E I+   + L   S   K 
Sbjct: 101 RMVAAWLEPESGPFMGSRALASGMDALNYSPTTKLWDPQTNEIISP--LQLNDESNRDKC 158

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
               + +    +  +++               +     ++    I++             
Sbjct: 159 HCSGIHSRSSDVPTTKERVELFWVDFPAPANKEVRVIPSEWSGPIDQPVTITDNQPFNNP 218

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN---TPMFDK 239
              +      +D A +  S  +    D +          +          N     +FD 
Sbjct: 219 APDIATFADNEDPADEYGSPEAKRYIDKLQDKTESLLGSSTTTADATTALNITADVLFDF 278

Query: 240 SSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S    +   VL  + + L      + + + GHTDA   +     N +LS DRA +  +
Sbjct: 279 DKSEINDKGHKVLGNVAKTLNQQAAGQTVKVVGHTDA---KGDENYNKKLSEDRAKAVQK 335

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRIDI 336
            L    ++  ++    G    +    +        +   + NRR+  
Sbjct: 336 ELQPQ-LNNVKLET-EGRGETQPIAKNFDDKGNDLEANQAKNRRVSF 380


>gi|261380050|ref|ZP_05984623.1| OmpA family protein [Neisseria subflava NJ9703]
 gi|284797260|gb|EFC52607.1| OmpA family protein [Neisseria subflava NJ9703]
          Length = 253

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +   +  +F        PE    L  + + L
Sbjct: 55  DKATEGRVECGDREAVAPVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLNALAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              S + + + GHTD   F    + N  LS  RA      L+  GV+  +IS + G    
Sbjct: 115 SNESVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGRGVASSKISAV-GLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|28900810|ref|NP_800465.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28809256|dbj|BAC62298.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 215

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S++        + ++   L       I I+G+         A  N  LS  RA +
Sbjct: 93  LFDNDSALINQMFKNKIDELAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 149

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343
              +L++ G+  DR+  I  F   +L         ++ NRR+   V  +QG
Sbjct: 150 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 199


>gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda]
          Length = 351

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA +    L+  G+  D+I    G             +    +A  N     RR+ I 
Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda]
          Length = 351

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA +    L+  G+  D+I    G             +    +A  N     RR+ I 
Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|207092500|ref|ZP_03240287.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_AG0C1]
          Length = 260

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   ++ +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSSLLFENATSDAINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda]
          Length = 351

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA +    L+  G+  D+I    G             +    +A  N     RR+ I 
Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|192360106|ref|YP_001981638.1| OmpA family protein [Cellvibrio japonicus Ueda107]
 gi|190686271|gb|ACE83949.1| OmpA family protein [Cellvibrio japonicus Ueda107]
          Length = 576

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 9/249 (3%)

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
              +  LS      ++S  L       +     +       +        + S       
Sbjct: 334 DPAQASLSPTAQRFESSTQLSDSVAKDEGGIGFIGLPYVRRAKLLSISSAEGSTAIMPTH 393

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                +   L + +             E+       +R Q + + I      + A     
Sbjct: 394 FTISTEDYPLARRLYFYLPQHNLHAEAEEFAKFSNSERGQGIVEDIGFISQNIKAGQPFA 453

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHT 272
              +      + +          F   S     +++  L+++ + +  ++ + + + G +
Sbjct: 454 NNFYPPEMRDLTLRSQRLSINFRFKDGSDQLDSKSLSDLERLVKYVEVNAPKRLQLFGFS 513

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330
           D+        +N  LSL RA      L+K G+         G        +SD       
Sbjct: 514 DSE---GDKHENLALSLRRAKVVEDHLIKRGIYP---LVAKGMGDEAPLASSDTEAGRHI 567

Query: 331 NRRIDILVE 339
           NRR+++ + 
Sbjct: 568 NRRVEVWIL 576


>gi|33152784|ref|NP_874137.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Haemophilus ducreyi 35000HP]
 gi|1150840|gb|AAC44382.1| 18 kDa outer membrane protein [Haemophilus ducreyi]
 gi|33149008|gb|AAP96526.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Haemophilus ducreyi 35000HP]
          Length = 157

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 8/131 (6%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
              A+     +            +  + NT  F+  S     E   +L      L  S  
Sbjct: 28  DANANMNGDAMAVNQFGGMTTEDLQTRYNTVYFNFDSYAVEGEYRQLLDAHAAYLTSSNS 87

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            +++ GH D          N  L   RA +    L   GV   ++S +S +   +  +  
Sbjct: 88  KVTVTGHADER---GTPEYNIALGQRRADAVKNYLATKGV--SQVSTVS-YGEEKPSVLG 141

Query: 325 DPMN--SANRR 333
                 + NRR
Sbjct: 142 HTEADYAKNRR 152


>gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida]
 gi|1588799|prf||2209353B major outer membrane protein OmpAII
          Length = 330

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   PE    +  L      +        + G+TD          N +LS 
Sbjct: 207 SDVLFAFGKSTLKPEGVAALNTLYHQNVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 263

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338
            RA +    L+  G+   ++  I G         +  D + +          +RR+++ V
Sbjct: 264 ARARTVADFLVGKGLPAGKV-AIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRV 322

Query: 339 EDRQ 342
              Q
Sbjct: 323 TGIQ 326


>gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202]
 gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202]
 gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60]
          Length = 351

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA +    L+  G+  D+I    G             +    +A  N     RR+ I 
Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338

Query: 338 VED 340
           V+ 
Sbjct: 339 VKG 341


>gi|218708117|ref|YP_002415738.1| putative outer membrane protein [Vibrio splendidus LGP32]
 gi|218321136|emb|CAV17086.1| putative outer membrane protein, ompA/motB [Vibrio splendidus
           LGP32]
          Length = 213

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 14/154 (9%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--------TPMFDKSSSI 243
           +Q  A   +  +  L+ D + +          +L                   FD     
Sbjct: 61  MQVNASTANQAIKNLIQDKLTQVSESADCAQYLLSRTKFVEGKLAREVLARVTFDFDDDE 120

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              ++  +L K+   L H T    + G+TD+   +     N  L L R+ +    L + G
Sbjct: 121 LNQKSRYLLLKLIAKLEHQTPEFIVTGNTDS---KGSDSYNLSLGLQRSNAVVGYLKEQG 177

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
           V+ + +  +S         +++  +    NRR+D
Sbjct: 178 VNIEDL-TVSSQGEANPVQSNETESGRHNNRRVD 210


>gi|70732179|ref|YP_261935.1| OmpA family outer membrane protein [Pseudomonas fluorescens Pf-5]
 gi|68346478|gb|AAY94084.1| outer membrane protein, OmpA family [Pseudomonas fluorescens Pf-5]
          Length = 304

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              LQ + + +     V  +   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIDLDARAKAKLQVMVDFIKADPTVNHVELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
             +    +G++E++I  +             +    + NRR+++ +E 
Sbjct: 235 VMEFFKANGLAENQIV-VRFHGERYPLAPNTNAANRAKNRRVNVHLER 281


>gi|15639284|ref|NP_218733.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025526|ref|YP_001933298.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
           SS14]
 gi|586110|sp|P38369|TPN50_TREPA RecName: Full=Outer membrane protein tpn50; AltName: Full=Antigen
           tpp57; Flags: Precursor
 gi|3322558|gb|AAC65272.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|7144504|gb|AAA20517.2| TpN50 precursor [Treponema pallidum]
 gi|189018101|gb|ACD70719.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059692|gb|ADD72427.1| outer membrane protein Tpn50 (Antigen tpp57) [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 417

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L   + D  +       T  G+ ISI        FD  S+   P     L+KI E+L  
Sbjct: 282 ELQETLKDLHMPDAKVRETEEGVTISI----ENVQFDADSASLAPSEYEKLRKIAELLRA 337

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  + + GH          +D  R+S +RA    + L + GV +       G    + 
Sbjct: 338 FPDRELLVSGHAARR---GSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQS 394

Query: 321 KIASDPMNSA--NRRIDILVEDR 341
              +D  +    NRR++I +  +
Sbjct: 395 IAPNDSEDGRRKNRRVEITIISK 417


>gi|330889603|gb|EGH22264.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 381

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +         V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+ +   K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
 gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L  +   + ++      I + G+TD          N +LS 
Sbjct: 237 SDVLFAFGKSNLKPAAAQALDAMQAEINNAGLANAAIQVNGYTDRI---GKEASNLKLSQ 293

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    ++  G S   ++ + G+           D +            +RR+++ V
Sbjct: 294 RRAETVANYIVSKGASAANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 352

Query: 339 EDRQ 342
           +  +
Sbjct: 353 QGSK 356


>gi|294624487|ref|ZP_06703170.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601217|gb|EFF45271.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 400

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 20/278 (7%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
            K   + +                 I+ + D       +D++            L +   
Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINATGDGGSGGAFIDVQSDGGGTYNGPAGLISLDG 190

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189
             + +  SE       R    G        +  + +    +  P    +           
Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTLGT 250

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              +     +           + K V   T    + I++ D+    +FD   S    +  
Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFVPPGTPCGYL-ITLNDR---ILFDFDKSDIRADAA 306

Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            VL  +G  L   T + + +RGHTDA   +     N  LS  RA +             +
Sbjct: 307 RVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361

Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339
            +   G    +    +      +P     NRR++I + 
Sbjct: 362 SANAKGDGESQPVAPNTVNRQDNPGGRQLNRRVEIFLR 399


>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
 gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
          Length = 356

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 228 KSDVLFNFNKYTLKAEGRQALDQLYTQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA +    L+  G+  D+I+   G             +    +A  N     RR+ I 
Sbjct: 285 KQRAQTVVDYLVSKGIPADKITA-RGMGKADPVTGATCDNVKPRAALINCLAPDRRVVIE 343

Query: 338 VED 340
           V+ 
Sbjct: 344 VKG 346


>gi|148979316|ref|ZP_01815448.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
 gi|145961856|gb|EDK27148.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
          Length = 322

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F            + L    E +      I+I GHTD   ++     N RLS  RA S  
Sbjct: 62  FAFDKYKLRDLDKINLDTFVEEIRGLKGRITIVGHTD---YKGSLEYNQRLSQRRAKSVA 118

Query: 297 QVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQ 342
             L       +   ++      +      +D   + NRR  I+ E+ Q
Sbjct: 119 DYLKAYLDPTNYDWEVKHLGETQPLLLGKTDKDRAENRRAFIVFEEAQ 166



 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N +        ++  +L    K R ++    I    +    +           +  + 
Sbjct: 127 PTNYDWEVKHLGETQPLLLGKTDKDRAENRRAFIVFEEAQKYEEMPFCEPPKPERKVYMA 186

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I+         FD   S+  PE +  L      L+     I + GHTD          N 
Sbjct: 187 ITPH-------FDFDKSVLKPEDLTQLDDFASQLSGLQGNIMVAGHTDQ---AGSVSYNE 236

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           +L+  RA +  + L      +  I ++  F   +  I   S+  ++ NRR  I+ ++ 
Sbjct: 237 KLAERRAETVVKYLKTKLNPKQFIWEVKSFGKLQPAINERSEKADALNRRAFIVFKES 294


>gi|329964410|ref|ZP_08301491.1| OmpA family protein [Bacteroides fluxus YIT 12057]
 gi|328525459|gb|EGF52507.1| OmpA family protein [Bacteroides fluxus YIT 12057]
          Length = 252

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ V        + +S        +F  +SS    E    L+++
Sbjct: 103 KMDKKAAEAAKIEGAQVEQVTDNNGLPAVKVSF---AAGILFAFNSSALSNEAKSSLREL 159

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L         I GHTD          N ++S +RAYS    L   GVS  +  K+ G
Sbjct: 160 AQILKEDPTTDIAIIGHTDKV---GTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEG 216

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             +       +     NRR++I +   +
Sbjct: 217 VGYTE--YDDNLSADQNRRVEIYMYASE 242


>gi|284007877|emb|CBA73797.1| peptidoglycan-associated lipoprotein [Arsenophonus nasoniae]
          Length = 180

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             N   F        PE   +L +    L  +    I++ GH D    +     N  L  
Sbjct: 74  SNNIVYFGFDKYDVTPEYAQLLDQHATFLRGNPSVKITVEGHADE---KGTPEYNIALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
            RA +    L   GV+ ++I  I  +   +  +    +   + NRR
Sbjct: 131 RRANAVKMYLQSKGVNGEQI-AIVSYGKEKPAVLGHDESAYAKNRR 175


>gi|154493612|ref|ZP_02032932.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
           43184]
 gi|154086822|gb|EDN85867.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
           43184]
          Length = 662

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS         +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 516 ISKPVVIENIFYDFDKATLRPESKKALDEMIKILNDNPNVTIELGAHTDR---KGSEQYN 572

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------------- 325
            RL+  RA S    L+  G+++DR+    G+     K  +                    
Sbjct: 573 ERLAQRRAQSVVDYLIAGGIAQDRLEA-KGYGESVPKAINKRMAKNYDFLNEGDVLTEEF 631

Query: 326 ----PMNSA------NRRIDILVEDRQ 342
                          NRR +  V    
Sbjct: 632 IERMTPEQQEIADQINRRTEFKVLRTN 658


>gi|229515018|ref|ZP_04404478.1| outer membrane protein [Vibrio cholerae TMA 21]
 gi|229347723|gb|EEO12682.1| outer membrane protein [Vibrio cholerae TMA 21]
          Length = 212

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   LQD  +        L  D      +        + S   Q+   +F   SS   
Sbjct: 42  ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P  +  ++++ E L       I ++G+         A  N  LS  R+ +    L++ GV
Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLVLSKQRSEAVRDQLLRYGV 158

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +R++ I G+    L++    D  ++ NRR+   V   +G
Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198


>gi|212704937|ref|ZP_03313065.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
 gi|212671601|gb|EEB32084.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
          Length = 155

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
                +    V   +      I  I      +F        P+   +L    E++     
Sbjct: 21  AKKTQDATGDVDDMSPEMRAAIQQITD-GRVLFAFDKFDIQPQYKDMLTAKAELMKKYPS 79

Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322
           +   I G+ D          N  L   RA +AY  +++ GV+  ++  IS +   +  + 
Sbjct: 80  IRVRIEGNCDER---GTQEYNLALGERRARAAYDYMVRLGVNPGQLEMIS-YGKEKPVVQ 135

Query: 323 -ASDPMNSANRR 333
            + + + + NRR
Sbjct: 136 GSGESVWAQNRR 147


>gi|229587133|ref|YP_002845634.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
           ESF-5]
 gi|228022183|gb|ACP53891.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
           ESF-5]
          Length = 155

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L+  G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 QKFLVHKGIDHNRLNTIS-YGKERPAMMGNTEEAFAYNRRAVTVV 153


>gi|153836901|ref|ZP_01989568.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|260362576|ref|ZP_05775496.1| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|260878366|ref|ZP_05890721.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|260896123|ref|ZP_05904619.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|260901510|ref|ZP_05909905.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|149749859|gb|EDM60604.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|308088130|gb|EFO37825.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308090275|gb|EFO39970.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308107674|gb|EFO45214.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308115286|gb|EFO52826.1| outer membrane protein [Vibrio parahaemolyticus K5030]
          Length = 205

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S++        + ++   L       I I+G+         A  N  LS  RA +
Sbjct: 83  LFDNDSALINQMFKNKIDELAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 139

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343
              +L++ G+  DR+  I  F   +L         ++ NRR+   V  +QG
Sbjct: 140 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 189


>gi|8928233|sp|Q9S3P9|MOTY_VIBAN RecName: Full=Sodium-type flagellar protein motY; AltName:
           Full=Polar flagellum motor protein; Flags: Precursor
 gi|5802659|gb|AAD51752.1|AF176946_1 polar flagellum motor protein [Listonella anguillarum]
          Length = 293

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++       V  +     +  S  D   T + +D+ +      +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQE-KYNVFSDCVSNLLTYSFEDISFTILHYDRDNVQLNKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + ++ ++  +    +TD+   R ++     LS  RA          G+ E
Sbjct: 199 QKRLAQIADYIRYNQDIDLVLVSTYTDSVDSRGVS---QDLSERRAEVLRDYFKSLGLPE 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           DRI ++ G+   R    +        NRR+ I +
Sbjct: 256 DRI-QVQGYGKRRPIADNASPIGKDKNRRVVISL 288


>gi|117617688|ref|YP_858093.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|330828308|ref|YP_004391260.1| peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
 gi|117559095|gb|ABK36043.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|328803444|gb|AEB48643.1| Peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
          Length = 174

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + N   F         +   +L      L     V   I GH D          N  L  
Sbjct: 68  RDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER---GTPEYNIALGE 124

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV  +++S +S +   +    S   +  + NRR  ++
Sbjct: 125 RRAKAVAKYLQTLGVQAEQLSIVS-YGEEKPLDMSHTEDAFAKNRRAVLV 173


>gi|294792911|ref|ZP_06758057.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
 gi|294455856|gb|EFG24220.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
          Length = 345

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +   +    L            + + + G+ D        + N  LS  R    
Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+  GVS DR+  I+     +    +      + NRR+D+ +  
Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345


>gi|189353654|ref|YP_001949281.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
 gi|189337676|dbj|BAG46745.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
          Length = 171

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +  + + + G+TD          +  LS  R
Sbjct: 64  GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDGYDLELSRRR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G   H     +      + NRR  I+V  R
Sbjct: 121 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 171


>gi|88658586|ref|YP_507279.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
 gi|88600043|gb|ABD45512.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
          Length = 175

 Score = 77.3 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +        +L+K+ +      +  I I GHTD          N  L   R
Sbjct: 42  EKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTR---GTDEYNLELGKQR 98

Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRL---KIASDPMNS-----ANRRIDILVED 340
           A +     L ++   EDRI  I             +++P  +      NRR+ I + D
Sbjct: 99  ANAVKDFILERNKSLEDRII-IESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLTD 155


>gi|68171722|ref|ZP_00545076.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998855|gb|EAM85553.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
          Length = 175

 Score = 77.3 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F    +        +L+K+ +      +  I I GHTD          N  L   R
Sbjct: 42  EKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTR---GTDEYNLELGKQR 98

Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRL---KIASDPMNS-----ANRRIDILVED 340
           A +     L ++   EDRI  I             +++P  +      NRR+ I + D
Sbjct: 99  ANAVKDFILERNKSLEDRII-IESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLTD 155


>gi|269962895|ref|ZP_06177235.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832449|gb|EEZ86568.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 301

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 79/292 (27%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               +      I +   P  +  +  ++    +++    +    +D  I +    +    
Sbjct: 34  FADVNVSKF-LISECLAPQREIHIAVAEHFDFDKSIIREADAVSLDAFIRDIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K              + + +E          E         +      K    
Sbjct: 93  IVGHTDFKG-------------SDEYNEKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGE 139

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P    +   A    +R   + ++          +            T           
Sbjct: 140 SQPLALGKSDQARAENRRAYVMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD   S   PE +  L      L      I + GHTD          N  L+  RA 
Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEELAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +    L K+ +   +   ++  F   +  I  +     + NRR  I+ ++ +
Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295


>gi|260575964|ref|ZP_05843959.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259021890|gb|EEW25191.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 650

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 7/115 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+         F   S+         L  + EVL    +  + I GHTDA         N
Sbjct: 492 INTALAVQKITFAPGSAEIAASAGKTLDALAEVLIKCPDLRLEIGGHTDAQ---GSTEGN 548

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             LS  RA +    L         ++ + G+   +    +        NRRI+  
Sbjct: 549 RALSQARAEAVLLGLQGRRAPVAGLTAV-GYGEDKPLADNGTDEGREANRRIEFT 602


>gi|225620337|ref|YP_002721594.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
 gi|225215156|gb|ACN83890.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
          Length = 266

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 18/156 (11%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP--LPETIVVLQKIG 256
           I    S L ++   + V  E    G +IS+   +    F+ +S+        +    K+ 
Sbjct: 106 IDKATSVLESEIKSRKVRIEEDERGFIISLGADQY---FESASTNLVDNQNNVETFIKLA 162

Query: 257 EVLAHSTEVISIRGHTDASPF------RNIARDNWRLSLDRAYSAYQVL----MKSGVSE 306
            VL+     + I GHTD+              +NW LS  RA    + +        +  
Sbjct: 163 SVLSGLPNDVRIEGHTDSGSIIPGSITEQKFGNNWGLSSARAMVILEKIFENDQAGKLDR 222

Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340
           ++   I+G+A  R   ++D     + NRR+DI+V  
Sbjct: 223 NK-YSIAGYADTRPVASNDLPDGRALNRRVDIVVVR 257


>gi|117617594|ref|YP_855822.1| major outer membrane protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559001|gb|ABK35949.1| major outer membrane protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 344

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F        PE +  L  + + +           + G+TD          N +LS
Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337
             RA +    L+  G++  ++  + G         +               + +RR+++ 
Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRVEVR 335

Query: 338 VEDRQ 342
           V   Q
Sbjct: 336 VSGVQ 340


>gi|58422903|gb|AAW73251.1| OmpA [Serratia sp. MF 416]
          Length = 225

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F  + +   PE    L ++   L+        + + G TDA      A  N RLS 
Sbjct: 116 SDVLFAFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAV---GSAEYNLRLSE 172

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RA S    L+  G+  D+IS   G       
Sbjct: 173 QRAQSVVDYLISKGIPSDKISA-RGMGKANPI 203


>gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 346

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++       +   F    +   P+    L  I   +A      + + G+TD         
Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331
            N +LS  RA +    L+  GVS+  IS  +G         S               + +
Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGSKCDAVKGRKALIACLADD 335

Query: 332 RRIDILVEDRQ 342
           RR++I V   +
Sbjct: 336 RRVEIAVNGTK 346


>gi|114561619|ref|YP_749132.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114332912|gb|ABI70294.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 200

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 61/180 (33%), Gaps = 17/180 (9%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S+N              +    R   +    +  S+ +   V +     +     R  + 
Sbjct: 16  SVNDIVESNASTQQNFDLADSDRDGVIMARERCASTLIGAAVDNYGCGSIKDINERQDLK 75

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           I         +F  +S +  P+    ++++  V+        +I GHT           N
Sbjct: 76  I---------LFSNNSVVIEPQYYNQIERVANVMTTYPTTKVTIEGHTSKR---GSYELN 123

Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
             LS  RA +  +VL  + G+   R++  +G++  R    S    +   NRR+   V   
Sbjct: 124 LALSQKRAKAVIEVLENTFGIDPSRLNA-TGYSFDRPIDNSGTPEAEERNRRVVAEVTAD 182


>gi|332665208|ref|YP_004447996.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334022|gb|AEE51123.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 291

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 10/201 (4%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            +     D  + + L K + L  ++  + +  L   ++   +    K+ L+ L + I+  
Sbjct: 78  DELEEELDKAQNQALTKQSSLGDALKAKNDQILSLENQIAAIRGALKQELETLQQ-IAKE 136

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAH 261
               +A   V     E     I++++ +     +F    S+   P     L+ IG +L  
Sbjct: 137 FQDSLAKFPVAQYSVEVRNGKIVLALTESL---LFKSGVSNRIEPNGQAALKAIGTLLNA 193

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
           +  + I + GHTD         D+W  +  RA +  + L+    +  +R+    G     
Sbjct: 194 NPVLLIQVLGHTDNQAASRKNLDSWDFTSLRAATVVRSLIDTHDLGANRVISG-GRGEFD 252

Query: 320 LKIASDPMNS--ANRRIDILV 338
              +++       NRR+++ +
Sbjct: 253 PITSNETSEGQSRNRRVELSL 273


>gi|161520167|ref|YP_001583594.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|160344217|gb|ABX17302.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
          Length = 185

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P+   ++++IG  L  +  + + + G+TD          +  LS  R
Sbjct: 78  GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDGYDLELSRRR 134

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A      L+  G+   RI  I G   H     +      + NRR  I+V  R
Sbjct: 135 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 185


>gi|187927781|ref|YP_001898268.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
 gi|187724671|gb|ACD25836.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
          Length = 173

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +L +    L    +    I+G+TD       +  N  L   RA + 
Sbjct: 73  FDFDSYSVKSEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 130 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 172


>gi|217032506|ref|ZP_03437997.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
 gi|216945784|gb|EEC24407.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
          Length = 247

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 85/211 (40%), Gaps = 19/211 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           S +        +D       N R++I   +R
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIFFSNR 235



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|237859127|gb|ACR23739.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
          Length = 150

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E   +L      L A     + + G+TD          N  
Sbjct: 41  LQQRYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDER---GTPEYNIA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   GV   ++S +S +   +           + NRR
Sbjct: 98  LGQRRADAVANYLSAKGVQATQLSTVS-YGEEKPTELGHTEAAYAKNRR 145


>gi|94676590|ref|YP_588572.1| peptidoglycan-associated lipoprotein precursor [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219740|gb|ABF13899.1| peptidoglycan-associated lipoprotein precursor [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 211

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +I  +N   F           I +L +  + L  +    + I GH D          N  
Sbjct: 102 MISDQNVIYFTLDKYKIKSCFIPMLDEHAQFLRSNPSAQVIIEGHADER---GTPEYNIA 158

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           L   RA +  + L   GV  ++I  IS +   +  +   +    + NRR  ++
Sbjct: 159 LGERRANAVKRYLQSQGVCSEQIKIIS-YGKEKPAVFGHNKAAYAKNRRTVLV 210


>gi|296136887|ref|YP_003644129.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
 gi|295797009|gb|ADG31799.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
          Length = 180

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
             +  F  +S     +   VL      L    +  + ++G+TDA         N  L   
Sbjct: 73  PKSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDAR---GSREYNLALGQK 129

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +  + +   GV   ++  IS +   + K   +     + NRR+DI+
Sbjct: 130 RADAVMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 177


>gi|254253147|ref|ZP_04946465.1| Outer membrane protein [Burkholderia dolosa AUO158]
 gi|124895756|gb|EAY69636.1| Outer membrane protein [Burkholderia dolosa AUO158]
          Length = 182

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 80  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     +       +   + NRR D++
Sbjct: 137 RRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 179


>gi|165975761|ref|YP_001651354.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149578|ref|YP_001968103.1| outer membrane protein precursor PalA [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249536|ref|ZP_07335743.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252546|ref|ZP_07338709.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245117|ref|ZP_07527210.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247296|ref|ZP_07529344.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251837|ref|ZP_07533738.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254073|ref|ZP_07535920.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307256332|ref|ZP_07538115.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307258528|ref|ZP_07540265.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260771|ref|ZP_07542458.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262897|ref|ZP_07544521.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|322514835|ref|ZP_08067854.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
           25976]
 gi|1405436|emb|CAA61413.1| PALA outer membrane protein precursor [Actinobacillus
           pleuropneumoniae]
 gi|165875862|gb|ABY68910.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914709|gb|ACE60961.1| outer membrane protein precursor PalA [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648514|gb|EFL78707.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651610|gb|EFL81759.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306854006|gb|EFM86218.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306856140|gb|EFM88295.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860529|gb|EFM92541.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862998|gb|EFM94945.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865158|gb|EFM97058.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306867432|gb|EFM99283.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869497|gb|EFN01287.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871802|gb|EFN03522.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|322119217|gb|EFX91358.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
           25976]
          Length = 152

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  F   S     E   +L      L  +   +++ GH D          N  L
Sbjct: 46  LQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANGKVTVAGHADER---GTPEYNIAL 102

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L   G   +++S +S +   +  +        + NRR
Sbjct: 103 GQRRADAVKNYLATKG--ANQVSTVS-YGEEKPAVLGHTEADYAKNRR 147


>gi|32033646|ref|ZP_00133957.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207788|ref|YP_001053013.1| outer membrane protein precursor PalA [Actinobacillus
           pleuropneumoniae L20]
 gi|307249520|ref|ZP_07531507.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|126096580|gb|ABN73408.1| outer membrane protein precursor PalA [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306858375|gb|EFM90444.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 156

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  F   S     E   +L      L  +   +++ GH D          N  L
Sbjct: 50  LQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANGKVTVAGHADER---GTPEYNIAL 106

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L   G   +++S +S +   +  +        + NRR
Sbjct: 107 GQRRADAVKNYLATKG--ANQVSTVS-YGEEKPAVLGHTEADYAKNRR 151


>gi|284039792|ref|YP_003389722.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283819085|gb|ADB40923.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 813

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 19/296 (6%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +++  +   +  +E   +   +                  +      L I   I     +
Sbjct: 527 LMSDANGFLRICLEASNSFTFQASRDGYINSMVGFTTRSLTDDQPSQLEIGL-IKPTVAE 585

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
             I  +N              +         +  +   + + ++ C  T  E     +  
Sbjct: 586 DTIAVSNNNLLLTATPLTHSRVQGVIMGARDRKPIEGVTVRIRNECDRTQREYVTGPDGR 645

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
           Y            +  K        +I           +   +   +    + I      
Sbjct: 646 YMFDVNEGCDYTLVASKPAFGTNRNRIRRLPKKTKPKAVSADLRMLSVGDVVTI------ 699

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D   S    +    L K+   +      +I IR HTD+      A  N  LSL R
Sbjct: 700 DNIYYDLDHSSLREDAARELDKVVATMRKYPSLIIEIRSHTDSR---GDAERNKALSLQR 756

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A +    L   G+S  R+    G    +L          ++  +  NRR +  V +
Sbjct: 757 AKAVAAYLASKGISRKRM-ATLGMGESQLVNNCTDGVICTEAEHQRNRRTEFRVVE 811


>gi|268679162|ref|YP_003303593.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617193|gb|ACZ11558.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 166

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFR 278
             ++ S+     T  FD        +    +     +          I + G+ D     
Sbjct: 47  QKLIASLEANSKTIYFDFDKYNVRKDQQTNIDANAALFNSAEAKNFSIKVEGNCDEF--- 103

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
                N+ L L RA S    L+  G++ DR++ +S +      +   +    + NRR + 
Sbjct: 104 GTDEYNYALGLKRAKSVKDGLVAKGMNADRLTVVS-YGESNPAVNEHNKDAWAKNRRAEF 162

Query: 337 LVE 339
            V 
Sbjct: 163 KVL 165


>gi|254453865|ref|ZP_05067302.1| OmpA domain protein [Octadecabacter antarcticus 238]
 gi|198268271|gb|EDY92541.1| OmpA domain protein [Octadecabacter antarcticus 238]
          Length = 311

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 12/135 (8%)

Query: 216 LFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRG 270
              T    +  S+ DQ    +    F+  S+         LQ + + L  + +    + G
Sbjct: 181 EVATITGDLAQSLEDQGRFILSGLVFETGSAQLGDAIFGSLQYLADYLIANPDRTVALVG 240

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS 329
           HTD   F      N  LS  RA S  + L+    +   ++    G  +     ++     
Sbjct: 241 HTD---FFGSLDGNIALSKRRAGSVLERLVTTYDIPRHQLDA-QGMGYLSPVASNLTEEG 296

Query: 330 A--NRRIDILVEDRQ 342
              NRR+++++   Q
Sbjct: 297 REANRRVEVIITSTQ 311


>gi|303256827|ref|ZP_07342841.1| outer membrane protein A (Outer membrane protein II)
           [Burkholderiales bacterium 1_1_47]
 gi|302860318|gb|EFL83395.1| outer membrane protein A (Outer membrane protein II)
           [Burkholderiales bacterium 1_1_47]
          Length = 221

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           ++     L  +      + +       +++       +F  + ++  PE I  L ++   
Sbjct: 67  LAEAQGALGQNCQCDTDIIKCEAGAERVTLSADT---LFAFNKAVLKPEGIAKLTELTSR 123

Query: 259 LAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           ++  + +V+ I G+ D       A  N +LS  RA +    L + GV   RI    G   
Sbjct: 124 MSGLTLDVVMINGYADRI---GGAAYNQKLSQRRADAVKTFLAEHGVPAARIHA-EGKGQ 179

Query: 318 HRLKI--ASDPMNSA-------------NRRIDILVEDRQ 342
               +   +                   NRR  I V+  +
Sbjct: 180 ADPVVNCPNPSAKGEIKTFKQLIECLQPNRRAVIEVKGTR 219


>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
 gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
          Length = 326

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 212 VKGVLFETTRTGILISIIDQRNTP-----MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
              +     +  ++  I  Q   P      FD  SS  LP    +L +I + LA   ++ 
Sbjct: 194 KDIIPITQPKETVVSEIKKQPKLPKNIILFFDFDSSEILP--TPLLHQITDQLAKFPKIN 251

Query: 267 S-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
             I  HTD+         N +L+  RA    +  +   ++++RI+ +           ++
Sbjct: 252 ISIIAHTDSE---GSDLYNDKLAAKRALEVSKYFLHKNINKNRIN-VLSHGERLPTHDNE 307

Query: 326 P--MNSANRRIDIL 337
                + NRR++I 
Sbjct: 308 TKKGRAKNRRVEIT 321


>gi|71282605|ref|YP_268470.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
           34H]
 gi|71148345|gb|AAZ28818.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
           34H]
          Length = 184

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 8/162 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
             ++   +    ++   A+        +      +    E  +   L  +    +   FD
Sbjct: 27  DTDEQSQVDTNAQITKNAEDAQKAQEAVQVTAAKRAAEIEEQKRQELAQLR-SEHIIYFD 85

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              S    +   +L    + L  +++V   I GH D          N  L   RA S   
Sbjct: 86  FDVSNVNDQFSAILDAHAKFLNANSDVKVLIEGHADER---GTPEYNIALGERRAKSVVT 142

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            L   GV+  +++ +S +   +  +     N+   NRR  ++
Sbjct: 143 YLENMGVAAGQLTVVS-YGEEKPMVKDRSENAFSKNRRAVLV 183


>gi|297538146|ref|YP_003673915.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297257493|gb|ADI29338.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 378

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 14/112 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F    +        +L      +  + E   + + GHTD          N +LS  RA 
Sbjct: 261 LFGFDKAKLQDGAKPILDDTVAKIKANPELKTVIVTGHTDRI---GSTAYNQKLSEKRAS 317

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMN------SANRRIDIL 337
              + L+  GV    I+ + G        A             + NRR+ I 
Sbjct: 318 IVKEYLVSQGVDAGIITSV-GKGESEPVEACKGVTGKKLISCLAPNRRVVIT 368


>gi|283782254|ref|YP_003373009.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283440707|gb|ADB19149.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
          Length = 282

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 102/283 (36%), Gaps = 10/283 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           + +  +F      L  AS   F      + + Q     +      + S  L     +  +
Sbjct: 2   RRLLDHFRSTRNLLAAASLVCFLACGCKQGAFQPPAGTAQSNVFQQQSTALNSQVQDLTR 61

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +  +L+ N   L   +Q         + +++   L K      S  KE       + K+ 
Sbjct: 62  RVGQLDLNNADLH--RQLAQADQLKQQYADQVSLLQKQLGDMASRLKETQTAKAEIDKQV 119

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                  +     + + +S+ +  ++   + G+      + I I +   +   +F   S 
Sbjct: 120 QTLQASTRFRGGASIQANSSATNSLSTVQIPGIDVRQDGSVIRIELPADK---LFVTGSL 176

Query: 243 IPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            P  E   ++ ++   +  S   + I I GHTD +   N A  +  L+ +++ + +Q L+
Sbjct: 177 QPTLEAQRIIDEVATAIIRSYPRQRIVIEGHTDNAQAGNPAGAHL-LAYNQSQAVFQQLV 235

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           +      R   I+    +    ++      + NRRI+I+V   
Sbjct: 236 QRNSIPVRQLAIAAMGENHPLASNGTEQGRAKNRRIEIVVYPD 278


>gi|46202758|ref|ZP_00052660.2| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 382

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S+   P+ +  L++     A      +S+ G+TD       A  N RLS  RA + 
Sbjct: 152 FDLGSAKLSPQALQTLKEAAAAQAQMHAPLVSVAGYTDTL---GAADANLRLSRQRADAV 208

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
              L+K GV+   I   +     +L +A+  +   + NRR++I +
Sbjct: 209 TAELVKLGVNPA-IISENALGETKLAVATGDNKAEAKNRRVEITL 252



 Score = 43.0 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 18/274 (6%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +P     +T    +       E ++  +   +I+  +    +  +   T ++    + + 
Sbjct: 118 SPCRTTFLTHEPILKKAVGTTEVAADTRRSFTINFDLGSAKLSPQALQTLKEAAAAQAQM 177

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +   +S +  ++    +        +     T     +             E  LA+   
Sbjct: 178 HAPLVSVAGYTDTLGAADANLRLSRQRADAVTAELVKLGVNPAIISENALGETKLAVATG 237

Query: 190 K-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT-PMFDKSSSIPLPE 247
             + +   +++  TL+G    +   G                       F   SS     
Sbjct: 238 DNKAEAKNRRVEITLAGPTWAHGRYGGYAYGDHGHGWGGYYGHNGFAVFFLPGSSRLGSA 297

Query: 248 TIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            I  L+++         + +++ G TD +     A  N RLS +RA +    + K G S 
Sbjct: 298 DIARLKQVVAAQKTLKPKTVTVVGFTDQT---GSAATNARLSNERAQAVAAEIAKLGGST 354

Query: 307 DRISKISGF---AHHRLKIASDPMNSANRRIDIL 337
             +    G      +         +   RR++IL
Sbjct: 355 TSVEARPGEVWGGAY---------DGRARRVEIL 379


>gi|330502362|ref|YP_004379231.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328916648|gb|AEB57479.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 313

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F        P     L  I + +    +     I GH D          N  LS  RA +
Sbjct: 183 FPGGGIDLDPMAKAKLDIILDFVKADPTINSFQIDGHADN---SGNRLTNRDLSRRRALA 239

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             + L+  G+  ++I  +         + ++     + NRR  + ++ 
Sbjct: 240 VQEYLVAGGIPVEQI-TMRFHGERYPLVPNNNEANRAKNRRATLRLDR 286


>gi|310823157|ref|YP_003955515.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396229|gb|ADO73688.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 171

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   + +        L+ +   L                  + GHTD+      
Sbjct: 53  RKNQCSFKTGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDS---SGD 109

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A  N  LS  RA    + L+  G+    I  + G    +  +   D     + NRR +I 
Sbjct: 110 AAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRYEIQ 168

Query: 338 VE 339
           V 
Sbjct: 169 VR 170


>gi|193885262|pdb|2ZF8|A Chain A, Crystal Structure Of Moty
          Length = 278

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++  N       +     +  S  D   T + +++        +
Sbjct: 119 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 177

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+ E
Sbjct: 178 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 234

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 235 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 271


>gi|153826170|ref|ZP_01978837.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
 gi|149740111|gb|EDM54276.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
          Length = 212

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   LQD  +        L  D      +        + +   Q+   +F   SS   
Sbjct: 42  ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKASQMQQLHILFANDSSSIE 101

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P  +  ++++ E L       I ++G+         A  N  LS  R+ +    L++ GV
Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           + +R++ I G+    L++    D  ++ NRR+   V   +G
Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198


>gi|145640334|ref|ZP_01795918.1| scaffold protein [Haemophilus influenzae R3021]
 gi|145274920|gb|EDK14782.1| scaffold protein [Haemophilus influenzae 22.4-21]
          Length = 153

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 18  AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 78  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLTGKGVDAGKLGTVS-YGEEKP 133

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 134 AVLGHDEAAYSKNRR 148


>gi|328675505|gb|AEB28180.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
           novicida 3523]
          Length = 417

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNAQAKEVLDKLFAYLKLTDTTRFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I +E R
Sbjct: 127 LSKNRASSVEEYLVNKGLDSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLESR 183


>gi|307699909|ref|ZP_07636960.1| OmpA family protein [Mobiluncus mulieris FB024-16]
 gi|307614947|gb|EFN94165.1| OmpA family protein [Mobiluncus mulieris FB024-16]
          Length = 325

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 7/187 (3%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              ++ +        +        E+I AM     L  + +++   L+          + 
Sbjct: 77  SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
              T  G+++ ++       F    +   P    VL  +  VL  + E ++I G+ D +P
Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLTGTPEDVAIEGYADPNP 191

Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334
            +      N+ L+  RA      L   GV   ++  IS  A H+    A     S NRR+
Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251

Query: 335 DILVEDR 341
           DI++  R
Sbjct: 252 DIVIMSR 258



 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 6/175 (3%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK      P N   W + Y D +TV+M  FLV++ I+  D      + +         + 
Sbjct: 3   KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +         S               + +     +   + +  +      +L+  +
Sbjct: 63  VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           Q      +    +   +       L   +   + YF P  ++ +  A      L 
Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALA 171


>gi|110638196|ref|YP_678405.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
 gi|110280877|gb|ABG59063.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
          Length = 903

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD + S   PE    L ++      + +  I +  +TD          N  LS  R
Sbjct: 560 ENIYFDFNQSDLRPEAKKTLDELAAYSNKNPQIQIELNANTDGL---GTDTYNRALSEKR 616

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             +A   L+  GV   RI  ++     R   ++D       NRR++  +  
Sbjct: 617 GQAAIDYLIGKGVDHSRIV-MNPLGKERPLTSNDNEVGRQLNRRVEFYILG 666


>gi|21114987|gb|AAM42970.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
          Length = 89

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 267 SIRGHTDASPF---RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            I G TD  P         DNW LS  RA +  + L+  GV    +   + F   +   +
Sbjct: 1   MISGFTDDRPVLDSNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAA-FGSQQPVDS 59

Query: 324 S--DPMNSANRRIDI 336
           +  +   + NRR++I
Sbjct: 60  NADETRRAKNRRVEI 74


>gi|56551062|ref|YP_161901.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761362|ref|ZP_04759450.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753277|ref|YP_003226170.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56542636|gb|AAV88790.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374269|gb|EER63766.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552640|gb|ACV75586.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 176

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     E   +L +  +          +I GH D          N  L   RA + 
Sbjct: 75  FALNSHDLDSEAKAILDREIQWFKKYPSTRVTIEGHCDER---GTREYNIALGEKRADAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
              L K+GV+      +  +   R     + +   + NRR
Sbjct: 132 RDYLAKAGVANS--INVISYGKERPLAMGSDEESWAQNRR 169


>gi|319639245|ref|ZP_07993996.1| outer membrane protein class 4 [Neisseria mucosa C102]
 gi|317399429|gb|EFV80099.1| outer membrane protein class 4 [Neisseria mucosa C102]
          Length = 253

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +      +F        PE    L  + + L
Sbjct: 55  DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              S + + + GHTD   F    + N  LS  RA      L+  GV+  +IS + G    
Sbjct: 115 SNESVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGHGVASSKISAV-GLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|15893123|ref|NP_360837.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
           str. Malish 7]
 gi|15620330|gb|AAL03738.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
           str. Malish 7]
          Length = 155

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153


>gi|241759220|ref|ZP_04757326.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
 gi|241320356|gb|EER56653.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
          Length = 253

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +      +F        PE    L  + + L
Sbjct: 55  DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              + E + + GHTD   F    + N  LS  RA      L+  GV+  +IS + G    
Sbjct: 115 SNKNVETVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGRGVASSKISAV-GLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|83592206|ref|YP_425958.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83575120|gb|ABC21671.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 220

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F+ +S+  L +++  L +IG +L   +  ++ I GHTDA      +  N  LS  RA
Sbjct: 116 PILFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDA---NGPSDYNLALSRKRA 172

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            +    L+    +   R+ +  G     L   S P +  NRR+   
Sbjct: 173 EAVADYLIGSFAIPPARL-RTEGKGESALLRPSSPTHPDNRRVQFY 217


>gi|85709639|ref|ZP_01040704.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
 gi|85688349|gb|EAQ28353.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
          Length = 370

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S+   +   +L       A+     + + GHTD          N  L+  
Sbjct: 259 PYIVFFDFDESVITADAATILDNAVTAYANCGTAAVMLAGHTDR---SGSVTYNMGLAER 315

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S    L   G+ + RIS    F   + ++ +        NRR+++ 
Sbjct: 316 RNASVRAYLTGRGIPDGRISS-EAFGESQPRVPTADGVRELQNRRVEVT 363


>gi|315586519|gb|ADU40900.1| flagellar motor protein MotB [Helicobacter pylori 35A]
          Length = 255

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|255037333|ref|YP_003087954.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950089|gb|ACT94789.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 366

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 47/158 (29%), Gaps = 7/158 (4%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                + R   +   +  T++                 +  L  I     T  F +S   
Sbjct: 205 DKTDEEPRTYIIKLSLQRTINIKGRPIARPVAAVANVESPALKGISASDKTLYFPRSDYK 264

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              ++   L  +   +  +      I GHTD          N  LS  R     + L+  
Sbjct: 265 LPMQSRTYLDSVAMYILENKNKGLRITGHTDNV---GNPSLNLTLSEYRVRVISRYLIGK 321

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           GV E  +    G         +D   +   NRR+++ +
Sbjct: 322 GVPEG-VIAAVGVGSRFPVRPNDSEENRRMNRRVEVQI 358


>gi|197335579|ref|YP_002155689.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
 gi|197317069|gb|ACH66516.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
          Length = 292

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
              Q   + I   LS ++       V        +  S  D   T + FDK+S      +
Sbjct: 139 ADWQSPKQIIEVALSPVLFQE-QYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKAS 197

Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + +      +++ +  +TD+         N ++S  RA          G+  
Sbjct: 198 KKRLSQIADFIKYTKDVDLVLVATYTDS---SGGKNVNQQVSERRALKLQNYFESIGLPA 254

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           DRI ++  +   R    +      + NRR+ I +
Sbjct: 255 DRI-RVHSYGERRPIADNATPIGKNKNRRVVISL 287


>gi|284036645|ref|YP_003386575.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283815938|gb|ADB37776.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 322

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 245 LPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             ET     +    L+   +   +  GHTD+         N +LS DRA      L K+G
Sbjct: 229 TDETKKFFAEAVAYLSSHKDKKLVLTGHTDS---SGPDAVNMQLSRDRANDVKNKLRKTG 285

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +   +I ++        K  +       ANRR+ ++VE
Sbjct: 286 IEASQI-EVRAKGETEPKADNSTISGRKANRRVSVVVE 322



 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 230 DQRNTPMFD-KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
           D      F    ++  +      L  +   L  +      I G+  ++        N  L
Sbjct: 67  DLPGNFSFAKSGANANMNTLGGSLGTMIAYLKANPGRSLEIVGYYSSAEANTTPFPN--L 124

Query: 288 SLDRAYSAYQVLMKSGVSEDRISK 311
            L RA    Q L++ G+    ++ 
Sbjct: 125 GLARAEGIRQYLVQQGIPAASLTT 148


>gi|119356691|ref|YP_911335.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354040|gb|ABL64911.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 152

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
               +D   S    + +  L+     +  +    + I GH D          N  L   R
Sbjct: 47  GDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASSVVIEGHCDER---GTNEYNLALGERR 103

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA   ++  GV   R+  +S +   R       +   + NRR
Sbjct: 104 ANSAKDYIVNLGVDGARMKTVS-YGEERPFALGHDEASWAQNRR 146


>gi|323492355|ref|ZP_08097508.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
           LMG 20546]
 gi|323313402|gb|EGA66513.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
           LMG 20546]
          Length = 293

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 18/303 (5%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L A  LV+  + A         +QY     ++          E             +   
Sbjct: 4   LFATSLVL-SLTAFSAQAYALDKQYVAKPQQSTWQMVANTPLECRLVHPIPNYGDAVFSS 62

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
               K ++D ++       Q + +       +        + +  R  ++          
Sbjct: 63  HASKKINLDFELKMKRPMGQTRDVSLVSMPPAWRPGEGADRITNIRFFQQFDGYVGGQTA 122

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
              + + E    P  S ++  +   +  +      +SS L     +     +      + 
Sbjct: 123 WNILGELEKGRYPTFSYQEWRSRDERIEVA-----LSSVLFQRSYNVFSDCIANLLPYSF 177

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIA 281
             I+         +D++S     ++   L +I E + H+ ++  +    +TDA   ++ +
Sbjct: 178 EDIAFTILH----YDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSAS 233

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +    LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I + 
Sbjct: 234 QS---LSERRAEVLQEYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLG 289

Query: 340 DRQ 342
             Q
Sbjct: 290 RTQ 292


>gi|26987864|ref|NP_743289.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24982567|gb|AAN66753.1|AE016303_8 OmpA family protein [Pseudomonas putida KT2440]
          Length = 344

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +  K+             ++Q    K+++T +  K     +S+         ++    
Sbjct: 42  SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 99

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                KI     +  L +   K+   +     +   +  +   T         D+ N  +
Sbjct: 100 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 159

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    P ++  + ++ + +       + + GH D+      A  N +LSL+RA S 
Sbjct: 160 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 207

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +   SG+  DR+  + G      + A+D       NRR+++L+  + 
Sbjct: 208 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 255


>gi|260779320|ref|ZP_05888212.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605484|gb|EEX31779.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 303

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
            FD        +    L  +   L     +  +   G+TD          N  +S  RA 
Sbjct: 180 SFDLGQRHLTVQQTNTLGALYTYLRADKNISKVLIDGYTDNV---GSNVANLTISKQRAD 236

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
              + L KSGV   RI ++          ++      + NRR+ + +  
Sbjct: 237 LVAKALKKSGVEAARI-EVRSHGSRYPIASNSTPEGQAKNRRVTLRLVR 284


>gi|37704652|gb|AAR01598.1| OprF [Pseudomonas sp. MFY140]
          Length = 320

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +       + + GHT
Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 273

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
           D+         N +LS   A +  QVL    GV   R+  + G+   R   
Sbjct: 274 DSV---GPDAYNQKLSERLANAVKQVLTNQYGVEASRVQSV-GYGESRPVA 320


>gi|145589655|ref|YP_001156252.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048061|gb|ABP34688.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 163

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 9/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRL 287
            + +  FD  S    P+    +      L         I I+G+TD       A  N  L
Sbjct: 54  NKRSIYFDFDSYTIDPKYASTVSAHASYLKSFQKQKASIIIQGNTDDR---GTAEYNLAL 110

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              R+ +  + L+  GVSE ++  +S F   +    +    +   NRR D +
Sbjct: 111 GQKRSEAVKKALLVQGVSESQLESVS-FGKEKPANPAQTDAAFQENRRADFV 161


>gi|305665970|ref|YP_003862257.1| OmpA domain-containing protein [Maribacter sp. HTCC2170]
 gi|88710745|gb|EAR02977.1| OmpA domain protein [Maribacter sp. HTCC2170]
          Length = 301

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 83/280 (29%), Gaps = 14/280 (5%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
            ++    P  + + +                            + +S  L   S   +  
Sbjct: 30  GMQSKEEPEKEVITSIEPKATSFPFSFSDGDFTYSANDNFNFNSSSSAILTPVSQGVEDG 89

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            + L++ +   S    + +   +   +++               N   +  +P      +
Sbjct: 90  IESLKSFLDENSEKVFNINGYYTSDEENDSAFPNLGLARANAVKNYFVSKGIPSKLMNTL 149

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS--S 241
             +K      +L   ++     L      +    +     I   I     +  F+ +  S
Sbjct: 150 GQLK-----NELVPNVNLFSGPLGYSIANRAEDADEQLADIYQRIKGNPISLEFNTAEAS 204

Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                E       I   L      V +I GHTD +        N +L  +RA  A   LM
Sbjct: 205 INLRAEQRQKFANISRYLDKEDDAVANIVGHTDNT---GQRDANIKLGQERADFAKSYLM 261

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           ++G+ E RI+  S         ++D     + NRR  I +
Sbjct: 262 RNGIPESRINATS-KGPDEPIASNDTEEGRAKNRRTVITL 300


>gi|329954289|ref|ZP_08295383.1| OmpA family protein [Bacteroides clarus YIT 12056]
 gi|328527995|gb|EGF54981.1| OmpA family protein [Bacteroides clarus YIT 12056]
          Length = 224

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K           +     V+ +      +    D  +  +F  +SS    +    L+ + 
Sbjct: 75  KMDKKAAEAAKIEGAQVEVVKDANNLDAVKVTFD--SGILFAFNSSTLSNDAKASLRDLA 132

Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L   +T  I+I GHTD          N ++S +RAY+    L   GVS  +  ++ G 
Sbjct: 133 KILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGV 189

Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++          + NRR+ I +   +
Sbjct: 190 GYNE--YDESLSAAQNRRVVIFMYASE 214


>gi|117619075|ref|YP_857151.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560482|gb|ABK37430.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 287

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +DK+S      +   L  IGE +    S +V+ I  ++D+         N +LS  RA +
Sbjct: 180 YDKNSDELSLASKRRLAMIGEYVKVDKSIDVVVIDAYSDSY---GGRWPNQKLSEKRADA 236

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
             +V M  G+   +I  + G    +   +++     + NRR+ I    R G
Sbjct: 237 IKKVFMDLGIEPGKI-SVEGHGEKQHIASNETEDGRAKNRRVVIN-MGRNG 285


>gi|238650590|ref|YP_002916442.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
           peacockii str. Rustic]
 gi|238624688|gb|ACR47394.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
           peacockii str. Rustic]
          Length = 155

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKNYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153


>gi|126737228|ref|ZP_01752963.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
 gi|126721813|gb|EBA18516.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
          Length = 172

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    E   +LQ     L  + + + +I+GH D          N  L   R
Sbjct: 62  DRVLFPVDQSTLSAEATTILQGQARWLTANPDYVVTIQGHADEQ---GTREYNLALGARR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333
           A  A   L+  G++  RI ++  F   R     +++   + NRR
Sbjct: 119 ANEARDFLIGQGIAGTRI-QVVSFGKERPLEICSAESCYAKNRR 161


>gi|116255792|ref|YP_771625.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260440|emb|CAK03544.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 649

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 63/239 (26%), Gaps = 14/239 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
             +     +  +  +          + + +++   E   ++                ++ 
Sbjct: 412 AQEMMAANQPVADYEPLLVAADSPQVLWQASATLGEIYFSARRFADAAADYQQAIEIIKN 471

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +      +S     A + +    +               +   GVL       + 
Sbjct: 472 ETRTPKAPPAETISDLIQRAAQARILAANPTSDNPEGSFVPAEKDHRSGVLGGIYSENVR 531

Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283
            I  +       FD + S          Q++ E L       I + GHTD          
Sbjct: 532 GIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRIILVGHTDRR---GGDDY 588

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRID 335
           N +LS  RA +    L  +G+         G         +          ++ NRR++
Sbjct: 589 NQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 645


>gi|146302267|ref|YP_001196858.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146156685|gb|ABQ07539.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 643

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S    E  + L+KI +VL  +  +   IR HTD+       + N  LS  R
Sbjct: 531 KMIYFDLDKSNIRTEAALDLEKILDVLNQNPTMKLDIRSHTDSR---ASHQYNEALSDRR 587

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
           A S    L+++GV+++R+    G+   +L          ++  +  NRR + ++  
Sbjct: 588 AKSTISWLIQNGVAKNRL-TGKGYGETQLVNQCSDGVNCTEEEHQMNRRSEFIITA 642


>gi|58422899|gb|AAW73249.1| OmpA [Serratia sp. MF 426]
          Length = 228

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F+ + +   PE    L ++   L+        + + G TDA      A+ N RLS 
Sbjct: 119 SDVLFNFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAV---GSAQYNQRLSE 175

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RA S    L+  G+  D+IS   G       
Sbjct: 176 QRAQSVVDYLVSKGIPSDKISA-RGMGKSNPV 206


>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
 gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
           [Actinobacillus succinogenes 130Z]
          Length = 356

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282
           ++       +   F  + S   PE    L  I   +A  +   +++ G+ D         
Sbjct: 226 VVNKTFTLNSDVTFGFNKSTLKPEAASTLDGIYSEIAQVSSPAVAVNGYADRI---GKDA 282

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331
            N +LS  RA +    L+  GV  + I+  +G+        +               + +
Sbjct: 283 ANLKLSQRRAETVANYLVSKGVDSNAITA-TGYGSANPVTGNTCDAVKGRKALIACLAPD 341

Query: 332 RRIDILVEDRQ 342
           RR+++ V+  +
Sbjct: 342 RRVEVQVQGNK 352


>gi|296536906|ref|ZP_06898945.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
           49957]
 gi|296262766|gb|EFH09352.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
           49957]
          Length = 130

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L++    LA   +  + + GH D          N  L   R
Sbjct: 25  DRVFFDTDSSSVRGDQRATLERQAAWLAQYPQVQVLMEGHADER---GTREYNLALGQRR 81

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           A SA  VL+  GV+  RIS IS +   R           + NRR   +V 
Sbjct: 82  ANSARDVLVAQGVAPARISTIS-YGKDRPAALGSTPDAWAQNRRAVTVVR 130


>gi|120600520|ref|YP_965094.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
 gi|146294678|ref|YP_001185102.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120560613|gb|ABM26540.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
 gi|145566368|gb|ABP77303.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
          Length = 202

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    ++ I   L        +I GHT  +        N  LS 
Sbjct: 74  KEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +    L     +   R++ I G+   R  +      +   NRR+
Sbjct: 131 ERADAVTAALADRFNIDRSRLTAI-GYGSSRPIVLEQTPEAEMRNRRV 177


>gi|225075466|ref|ZP_03718665.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
           NRL30031/H210]
 gi|224953284|gb|EEG34493.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
           NRL30031/H210]
          Length = 253

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +      +F        PE    L  + + L
Sbjct: 55  DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                + + + GHTD   F    + N  LS  RA      L+  GV+  +IS + G    
Sbjct: 115 SNKDVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGHGVASSKISAV-GLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|157164388|ref|YP_001467102.1| putative chemotaxis protein MotB [Campylobacter concisus 13826]
 gi|112801393|gb|EAT98737.1| putative chemotaxis protein MotB [Campylobacter concisus 13826]
          Length = 363

 Score = 76.9 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 51/332 (15%), Positives = 115/332 (34%), Gaps = 32/332 (9%)

Query: 33  WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
           W + YAD M  L+  F+++       +++     + K+          K+    +  + +
Sbjct: 14  W-VSYADLMAGLLFVFMLLIGAVVVKYVLTQNTLENKEQAIIAALANLKDAQGKNFTLEE 72

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +  +       D +I+   +     ++I +  +K      EN     S  + +    +
Sbjct: 73  LNDALKSELSKISDENINLKKSNEIFIIQIDALKEKLAQLINENKDANASIKELNASIFD 132

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
              +      ++          N      L  ++       K++ R  +L + ++ T   
Sbjct: 133 LNQKMIVLNDEISSKDRALSDANASGEKNLAKIAFLLEQVSKKEARYDELLRDLNVTRDR 192

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSSSIPLPETIVVLQK--- 254
           +     ++  +    +  +  SI    N+         +FDK S++   E    L+    
Sbjct: 193 VKNLTGIRVKVISALKDRLGNSIEIDPNSGALKLSSSVLFDKGSAVLKEEVKEELKATLS 252

Query: 255 -------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE- 306
                    + +A + + I I G TD+         N  LS  RAY+  + +        
Sbjct: 253 KYFDVLLNDKEIASNIDQIVIEGFTDSD---GSYIYNLELSQKRAYAVMEFINSFSDDAR 309

Query: 307 -DRISKISGFAHHRLKIASDPMN-SANRRIDI 336
             ++   SG +++ L       +  A+RRI+I
Sbjct: 310 LRKLLVASGRSYNELVFKDGAEDKDASRRIEI 341


>gi|254229410|ref|ZP_04922826.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262396871|ref|YP_003288724.1| outer membrane protein [Vibrio sp. Ex25]
 gi|151938101|gb|EDN56943.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262340465|gb|ACY54259.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 205

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD  S++        +  +   L       I I+G+         A  N  LS  RA +
Sbjct: 83  LFDNDSALINQIFKNKIDGLAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 139

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343
              +L++ G+  DR+  I  F   +L         ++ NRR+   V  +QG
Sbjct: 140 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 189


>gi|170720335|ref|YP_001748023.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169758338|gb|ACA71654.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 327

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 16/215 (7%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
             + S+    +  K ++T    K     +S          ++         KI     + 
Sbjct: 35  WPFGSDEVAEQEVKQAVTEKVAKADAKSESASRWWWPFGGDDKQAKGPVVPKIDEKATQA 94

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L     K+   +           +  E     ++++I    +        ++ LP ++ 
Sbjct: 95  WLDQYEPKLREAIKDSK-------LELERRENVLVVTIPADSSYN--PDRPNMLLPMSLG 145

Query: 251 VLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            + ++ + +       + + GH D       A  N +LSL+RA S   +   SG+  DR+
Sbjct: 146 PITRVAKAVEGDPKTAVLVLGHADT---SGAAATNQKLSLERAASVSAIFRLSGLKRDRL 202

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             + G      + A+D     + NRR+++L+  + 
Sbjct: 203 -SLKGMGSEMPRAANDSVEGRALNRRVEMLLTPQN 236


>gi|327252310|gb|EGE63982.1| ompA family protein [Escherichia coli STEC_7v]
          Length = 127

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G    R     G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|254780547|ref|YP_003064960.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040224|gb|ACT57020.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
          Length = 160

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           ++  FD SS    P  I VL  +G  L        I GH D          +  L L RA
Sbjct: 50  DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRA 106

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           Y+ +   +  G+S  R+  ++ +      +    +   + NRR  + ++ 
Sbjct: 107 YAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155


>gi|24374850|ref|NP_718893.1| OmpA family protein [Shewanella oneidensis MR-1]
 gi|24349542|gb|AAN56337.1|AE015771_7 OmpA family protein [Shewanella oneidensis MR-1]
          Length = 196

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+ + +         L  +   L  +TE   ++ GHTD          N++LSL RA 
Sbjct: 90  VYFEFAIAEVDLSQWKALALVKSFLEANTETKLTLVGHTD---IVGTPEFNYQLSLQRAQ 146

Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  ++L++  G + +R   + G         +        NRR+  +V +
Sbjct: 147 NVKRILVEDYGFNPNRF-TVVGKGISEPVADNRSSEGRGLNRRVQFIVNN 195


>gi|332665133|ref|YP_004447921.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333947|gb|AEE51048.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 143

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     E I  L K  + +         I GHTD       A  N  LS  R+ + 
Sbjct: 38  FGGGSHYIDQEQIDALYKWLDGIPEVDSHDISIHGHTDNI---GGAEYNQWLSQMRSDNT 94

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            Q L+  G+  + +  I  F        +        NRR+DI+V
Sbjct: 95  LQKLVDKGLRTE-MISIRDFGQFNPLFDNSTWEGRRKNRRVDIIV 138


>gi|294341056|emb|CAZ89451.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Thiomonas sp. 3As]
          Length = 182

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
             +  F  +S     +   VL      L    +  + ++G+TDA         N  L   
Sbjct: 75  PKSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDAR---GSREYNLALGQK 131

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +  + +   GV   ++  IS +   + K   +     + NRR+DI+
Sbjct: 132 RADAVMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 179


>gi|168703394|ref|ZP_02735671.1| OmpA/MotB domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 183

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 10/187 (5%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88
             GSWK+ YADF+T +MAFFLVMW I A D   ++++  YF                 + 
Sbjct: 4   GGGSWKVAYADFVTAMMAFFLVMW-IGAQDVKVRQSVANYFIDPAGVSKKPVSDGAVLET 62

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P       ++ ++        S  +   ST            + +++             
Sbjct: 63  PSSGPVAGQLQVAGGRGTRVPSGGVPSPSTAA---------ILNWINADAARSRHWKGEA 113

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
           +   +     K+ +  ++  + E   L  L    +     K   +     + S    +  
Sbjct: 114 QRVREAAAAQKAVNESRTPEEVEIAQLSQLLASDLAGTVPKDMPEVYKDLLFSAFKEVNW 173

Query: 209 DNIVKGV 215
           + +   +
Sbjct: 174 EQVAGTL 180


>gi|293603403|ref|ZP_06685830.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
           43553]
 gi|292818176|gb|EFF77230.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
           43553]
          Length = 166

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           SI+ Q+ +  FD  S     +   +++     LA   +    I G+TD       A  N 
Sbjct: 54  SILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKVKIEGNTDER---GGAEYNL 110

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            L   RA +  +++   GVS+++I  IS F   + K         + NRR DI
Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKSTGTSEADFAENRRADI 162


>gi|260778741|ref|ZP_05887633.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604905|gb|EEX31200.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 279

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 8/224 (3%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             + L        + Q ++   ++L R+  +           +  N+        L  + 
Sbjct: 45  PDEPLGPEHGLRFDWQLAKLHLDALIREGARWCFPAAVVQALEKQNRIARELEGGLLLDA 104

Query: 183 ILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              +  ++KRL +L +++    S            F+     I            F  +S
Sbjct: 105 ANDIVIQRKRLDELERQLDYVTSQAKCVPPHDEFSFQQQLAIIDKLYNLLNVDNQFAFNS 164

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P+ +  L +   +L       +++ GH D+         N +L++ RA    + L 
Sbjct: 165 TEVNPKYMGHLAQAANILREHKSLNLTVTGHADSV---GDELQNQQLAMGRAKQVKRYLT 221

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             G+   RI               +       NRR+ I V +  
Sbjct: 222 IFGLEPKRIEA-KSLGESLPLFEGESDGVRLTNRRVSIEVVETN 264


>gi|153831615|ref|ZP_01984282.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148872125|gb|EDL70942.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 301

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               +      I +   P  +  +  ++    +++    +    +D  I +    +    
Sbjct: 34  FADVNVSKF-LISECLAPQREIHIAVAQHFDFDKSIIREADAASLDAFIRDIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K              + + +E          E       + +      K    
Sbjct: 93  IVGHTDFKG-------------SDEYNEKLSMRRAESVEAYLQQQLNPEQYDWEVKHFGE 139

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P    +   A    +R   + ++          +            T           
Sbjct: 140 SQPLALGKSDQARAENRRAYVMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD   S   PE +  L      L      I + GHTD          N +L+  RA 
Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEQLAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +    L K+ +   +   ++  F   +  I  +     + NRR  I+ ++ +
Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295


>gi|37679728|ref|NP_934337.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|37198473|dbj|BAC94308.1| outer membrane protein [Vibrio vulnificus YJ016]
          Length = 226

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 7/181 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +     +               +   LQD  +        L  D      +        +
Sbjct: 33  ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 92

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
            +    +   +F   S    P     ++++ E L       I ++G+   +     A  N
Sbjct: 93  KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 149

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
             LS  RA +  ++L+  G+++ R+ +I GF    L      +  ++ NRR+   V   +
Sbjct: 150 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSALANEGTDEVSHALNRRVVASVVGYK 208

Query: 343 G 343
           G
Sbjct: 209 G 209


>gi|212633286|ref|YP_002309811.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212554770|gb|ACJ27224.1| OmpA [Shewanella piezotolerans WP3]
          Length = 201

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           Q    +F   S    P     ++ I   +       ++  GH   +        N  LS 
Sbjct: 73  QELKILFANDSYYIDPVYYTQVEIIATFMQKFPNTQAVIEGHCSKT---GTHEHNQELSQ 129

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   +L +   +   R+S + G++  R    +    +   NRR+
Sbjct: 130 NRANAVSALLSERFDIESSRLSAV-GYSFDRPIDPTHTAAAHKVNRRV 176


>gi|120436709|ref|YP_862395.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578859|emb|CAL67328.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 536

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
             +  +FD   +    +    L  I   +    E+ I IR HTD+       + N +LS 
Sbjct: 412 DLDPILFDLDKAEIESKAARQLDHIAAYMQEYPELLIDIRSHTDSR---ADDKYNIKLSQ 468

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILV 338
           +R     Q L+  GV  +RI    G+    L           +  ++ NRR + ++
Sbjct: 469 NRVAVTRQYLVNMGVDGNRI-SGRGYGETELVNNCRNKIPCPEDAHAINRRSEFIL 523


>gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
 gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
          Length = 353

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ +      E    L ++   L+        + + G+TD        + N +LS
Sbjct: 225 KSDVLFNFNKFTLKAEGRQALDQLYSQLSSMDPKEGSVVVLGYTDRI---GSDQYNLKLS 281

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS--AN-----RRIDIL 337
             RA +    L+  G+  ++I    G             +    +   N     RR+ I 
Sbjct: 282 KQRAQTVVDYLVSKGIPANKI-AARGMGKADPVTGSTCDNVKPRASLINCLAPDRRVVIE 340

Query: 338 VEDRQ 342
           V+  +
Sbjct: 341 VKGTK 345


>gi|224824631|ref|ZP_03697738.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
 gi|224603124|gb|EEG09300.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
          Length = 218

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            K  + L +      +      + +            +++  +    +FD + +    + 
Sbjct: 51  DKATEGLVECGDKEAAKPAPTPVAEAPKPAMVAVKEKVTLSAK---VLFDFNKTNLRADA 107

Query: 249 IVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L  +   L     + S+   GHTD   +    + N  LS  RA +     + +GV  
Sbjct: 108 KNELDPLVSRLKGDANLKSVEVDGHTD---YLGSEKYNQALSQKRADAVKNYFVAAGVPA 164

Query: 307 DRISKISGFAHHRLKIASDPMNSA-------------NRRIDILVE 339
           ++++ + G      K+  +                  +RR+++ ++
Sbjct: 165 EKVTAV-GKGESEAKLTDECKAKKFKKKAALQACLEGDRRVELTID 209


>gi|217034137|ref|ZP_03439557.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
 gi|216943421|gb|EEC22877.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
          Length = 255

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|110806727|ref|YP_690247.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
 gi|110616275|gb|ABF04942.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
          Length = 160

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A       +  G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWVIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|59711570|ref|YP_204346.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           fischeri ES114]
 gi|197335447|ref|YP_002155724.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
 gi|59479671|gb|AAW85458.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           fischeri ES114]
 gi|197316937|gb|ACH66384.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
          Length = 188

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   +S    E   +L      L A  +  +++ GH D          N  L  
Sbjct: 82  KVQTVYFAFDNSTISSEYEDMLAAHAAFLSADPSIKVTVEGHADER---GTPEYNIALGE 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 139 RRAKAVSKYLQALGVSADQISIVS-YGEEKPLVLGQTAEDYAKNRRAVLV 187


>gi|297579202|ref|ZP_06941130.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536796|gb|EFH75629.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 212

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 7/152 (4%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +   LQD  +        L  D      +        + S   Q+   +F   SS   
Sbjct: 42  ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P  +  ++++ E L       I ++G+         A  N  LS  R+ +    L++ GV
Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158

Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRI 334
           + +R++ I G+    L+     D  ++ NRR+
Sbjct: 159 APERVN-IVGYGDSVLEAEGTDDVSHARNRRV 189


>gi|37679367|ref|NP_933976.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
           YJ016]
 gi|37198110|dbj|BAC93947.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
           YJ016]
          Length = 295

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 8/159 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     V      +   IS         ++++     
Sbjct: 142 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 197

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I E + +++++  +   T        +     LS  RA S        G+ 
Sbjct: 198 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLP 256

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           EDRI ++ G+   R    +        NRR+ I +   +
Sbjct: 257 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 294


>gi|152978942|ref|YP_001344571.1| SmpA/OmlA domain-containing protein [Actinobacillus succinogenes
           130Z]
 gi|150840665|gb|ABR74636.1| SmpA/OmlA domain protein [Actinobacillus succinogenes 130Z]
          Length = 282

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        E   V+  +   L  S  + +S+ G+TD          N  LS  R
Sbjct: 147 GDFLFDFDKDTLTTEGKKVVDNVASQLKSSEAKEVSVAGYTDRL---GSDAYNLDLSQRR 203

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336
           A      L++ GVS       +G+       A +             NRR++I
Sbjct: 204 ADRVKNRLIEQGVSAQ--ITATGYGKANQVKACEGERGQALINCLHPNRRVEI 254


>gi|157829031|ref|YP_001495273.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933755|ref|YP_001650544.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
           Iowa]
 gi|157801512|gb|ABV76765.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908842|gb|ABY73138.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
           Iowa]
          Length = 155

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSSDLSPKAKEALERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            + L   G+  +R++ IS +   R  +  +     + NRR
Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRR 148


>gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius]
          Length = 290

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 182 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 238

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            +RA S    L+  G+  D+IS   G         +
Sbjct: 239 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGN 273


>gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 369

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 302

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 303 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 361

Query: 339 EDRQ 342
           +  +
Sbjct: 362 QGAK 365


>gi|145628739|ref|ZP_01784539.1| scaffold protein [Haemophilus influenzae 22.1-21]
 gi|144979209|gb|EDJ88895.1| scaffold protein [Haemophilus influenzae 22.1-21]
          Length = 153

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 18  AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77

Query: 262 ST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 78  TPATKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 134 AVLGHDEAAYSKNRR 148


>gi|239817427|ref|YP_002946337.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
 gi|239804004|gb|ACS21071.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
          Length = 168

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD       P+   V++     L +     + I GHTD    R     N  L   RA 
Sbjct: 65  VYFDFDKYDVKPQYRNVVEAHASYLRNRPASKVVIEGHTD---LRGGREYNLALGQRRAE 121

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336
           S  + L + GV  +RI  +S +   +      ++  +  NRR + 
Sbjct: 122 SVQRALTQLGVPGERIEAVS-WGIEKPASLETTEEGHQLNRRAEF 165


>gi|91787861|ref|YP_548813.1| OmpA/MotB [Polaromonas sp. JS666]
 gi|91697086|gb|ABE43915.1| OmpA/MotB [Polaromonas sp. JS666]
          Length = 180

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S +  PE   +++     L A+    ++I GHTD          N  L   R+ + 
Sbjct: 79  FDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDER---GGREYNLALGQRRSEAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            + L   GV++ ++  +S F   +        +  + NRR +I
Sbjct: 136 RRALGLLGVADAQVEAVS-FGKEKPAATGSDEDSMAKNRRAEI 177


>gi|238920737|ref|YP_002934252.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
           ictaluri 93-146]
 gi|238870306|gb|ACR70017.1| peptidoglycan-associated lipoprotein, putative [Edwardsiella
           ictaluri 93-146]
          Length = 170

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F        P+ +  L      L  +     ++ GHTD         
Sbjct: 57  LQMQELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER---GTPE 113

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            N  L   RA +    L   GVS D+I  +S +   +  +        + NRR  ++
Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169


>gi|238022763|ref|ZP_04603189.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
 gi|237865966|gb|EEP67102.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
          Length = 230

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290
           ++  +F        PE I  L  +   L+  + + + + G+TD   F    + N  LS  
Sbjct: 85  QSEFLFGFDKYNLRPEAITTLNDLSAKLSQSNVQSVRVEGNTD---FMGSDKYNQALSER 141

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           RA +    L++ GV  DRIS + G    +
Sbjct: 142 RANTVANYLVQQGVPADRISAV-GLGETQ 169


>gi|328469233|gb|EGF40179.1| hypothetical protein VP10329_10131 [Vibrio parahaemolyticus 10329]
          Length = 301

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
            +  +      I +   P  +  +  ++    ++     +    +D  I +    +    
Sbjct: 34  FSDVNVSKF-LISECLAPQREIHIAVAEHFDFDKFKIREADATSLDAFIRDIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K   +    N        QS         D        K     + +  + + 
Sbjct: 93  IVGHTDYKGSNE---YNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLTLDTSD 149

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                ++   +  +  ++  ++           V   +                      
Sbjct: 150 QARAENRRAYVMFEEAQKYDEMPFCEPPKPERKVYMTMTPH------------------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD   S    E +  L    E L      I + GHTD          N +L+  RA 
Sbjct: 191 ---FDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQV---GSLSYNEKLAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           +  + L K+ +   R+  ++  F   +  I   +   N+ NRR  I+ ++ +
Sbjct: 245 TVAEYL-KTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFKESE 295


>gi|157164304|ref|YP_001466351.1| Omp18 [Campylobacter concisus 13826]
 gi|112800114|gb|EAT97458.1| Omp18 [Campylobacter concisus 13826]
          Length = 168

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 9/146 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    +   + +    +        ++ +I  Q  +  FD        +   V+     V
Sbjct: 26  VDMNANSNQSADNSGSMSDADRLAALIANIESQVKSVYFDFDKFNIKADQQGVVSSNASV 85

Query: 259 LAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
              +      I + G+ D          N+ L L RA SA   L+++GVS DRI  +  F
Sbjct: 86  FNQADAQALSIKVEGNCDEW---GTDEYNYALGLKRAKSAKDALVRNGVSADRI-AVVSF 141

Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339
                          + NRR D  V 
Sbjct: 142 GESNPVCTDKTKACDAQNRRADFKVL 167


>gi|51473939|ref|YP_067696.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
           str. Wilmington]
 gi|51460251|gb|AAU04214.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
           str. Wilmington]
          Length = 155

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P+    L++    L+   E  +++ GH D          N  L   RA +A
Sbjct: 53  FAFDSASLSPKAKEDLERQACWLSKHPEVKVTVEGHCDER---GTRDYNIALGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR-IDIL 337
            Q L   G++ +R++ IS +   +  +  +   +   NRR + ++
Sbjct: 110 KQFLANKGIAHNRLNTIS-YGKDKPAMMGNTEEAFSYNRRAVTVV 153


>gi|42527497|ref|NP_972595.1| OmpA family protein [Treponema denticola ATCC 35405]
 gi|41818082|gb|AAS12506.1| OmpA family protein [Treponema denticola ATCC 35405]
          Length = 452

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   ++ L      L +I ++L  S  E   + GHT          +   LS +RA + 
Sbjct: 350 FEPDRAVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADV---GKPEEEKILSQERAKTV 406

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L+K G+  ++     G    +    +        NRR++I +
Sbjct: 407 IEKLVKRGIPAEKFI-YQGAGGTKPISPNGTEEGRSQNRRVEITI 450


>gi|134288289|ref|YP_001110452.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134132939|gb|ABO59649.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
          Length = 202

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           P +   L  I          I + GH D          N RLS+ RA +    L+  GV+
Sbjct: 110 PTSWAPLSSIVTRARGDDSPIKVVGHADEV---GGDDYNQRLSVRRATAVSNYLVAKGVA 166

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +RI    G              + NRR+ I
Sbjct: 167 RNRIES-EGHGKREPVSPG--AGAQNRRVVI 194


>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
 gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
          Length = 383

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 260 SDVLFDFGKSSLNPAAATALDAANTEIANLGLATLAIQVNGYTDRI---GKEASNLKLSQ 316

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    L+  G +   ++ + G+           D +            +RR+++ V
Sbjct: 317 RRAETVANYLVSKGQNAANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 375

Query: 339 EDRQ 342
           +  +
Sbjct: 376 QGSK 379


>gi|50235077|gb|AAT70741.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 76/268 (28%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++ +++          F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSELMLKATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|7327635|gb|AAF45029.2|AF146597_1 putative outer membrane protein [Aeromonas hydrophila]
          Length = 344

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F        PE +  L  + + +           + G+TD          N +LS
Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNALYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337
             RA +    L+  G++  ++  I G         +  D + +          +RR+++ 
Sbjct: 277 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCDGVKAKAQLISCLAPDRRVEVR 335

Query: 338 VEDRQ 342
           V   Q
Sbjct: 336 VSGVQ 340


>gi|189219864|ref|YP_001940505.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
 gi|189186722|gb|ACD83907.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
          Length = 311

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 15/229 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           ++  R+      L   +  +         +E  +        E+ + K         SK+
Sbjct: 53  EKTVRVLKEEDELLKQENQKQRAVVDQLQAELAQTGSLLKSQEELLEKTTQSLKAVESKK 112

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKS 240
           +            L  +++  L+ L A+ I             I+I       + +F   
Sbjct: 113 RQEEAVSTHENFTLIHEMAQKLNALFAEEIQKGESWVIQNPQNIVIRF---SKSALFSYG 169

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFR----NIARDNWRLSLDR 291
                     +L+K+   L    +      I +  +TD  P      N+   NW +S  R
Sbjct: 170 GIKISNSGKALLEKLITALKPYLDNSKEAKIEVCAYTDNDPPALEVQNVYPTNWEISAMR 229

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           + +  + L++     + I  ++     +    +        NRR++I +
Sbjct: 230 SAAVIRTLIQLSQLPEDIFSLAAGGATKPIADNSFQEGKEKNRRVEITL 278


>gi|119477236|ref|ZP_01617472.1| peptidoglycan-associated lipoprotein OprL [marine gamma
           proteobacterium HTCC2143]
 gi|119449599|gb|EAW30837.1| peptidoglycan-associated lipoprotein OprL [marine gamma
           proteobacterium HTCC2143]
          Length = 175

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   +    +T   L     VL  ++  + + GH D          N  L+  RA +  
Sbjct: 77  FDFDQATLSADTREALDSQIAVLNENSNKVRLEGHADER---GTREYNMALAERRANAIA 133

Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
             ++ +GV+  R+  +S +   R     +S+   S NRR+++
Sbjct: 134 NYMIINGVARYRVETVS-YGEERPVSAGSSESSYSENRRVEL 174


>gi|325285003|ref|YP_004260793.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324320457|gb|ADY27922.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 647

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    +  + +Q++   L    EV I +R HTDA         N  LS 
Sbjct: 533 KLDPIYFDLDKSFIRIDGQITMQQVFAYLKEYPEVVIEVRSHTDARATN---EYNLALSN 589

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILV 338
            RA    + L+ +G++ +R+    GF    L    D         +  NRR + +V
Sbjct: 590 RRAKETVKYLLDNGIAPERV-SGKGFGESELTNNCDSNSKCSEEEHQKNRRSEFIV 644


>gi|145299432|ref|YP_001142273.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142852204|gb|ABO90525.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 291

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +DK+S      +   L  IGE +    S +V+ I  ++D+         N +LS  RA 
Sbjct: 183 SYDKNSDQLSLASRRRLAMIGEYVKVDKSIDVVVINAYSDSY---GGRWPNQKLSEKRAD 239

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
           +  +V +  G+   +I  + G    R   +++     + NRR+ I    R G
Sbjct: 240 AIKKVFVDLGIDPGKI-SVEGHGEKRHATSNETEDGRAKNRRVVIN-MGRNG 289


>gi|144897998|emb|CAM74862.1| conserved hypothetical protein, secreted [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 198

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   PE+  +L  + + +        SI GHTD       A+ N+ L L RA   
Sbjct: 97  FQFQSTDLTPESKALLPSVLDEVKARPAPDLSIIGHTDGM---GDAKYNYELGLRRAKEV 153

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
             ++   G+   R+ +++        +        + NRR+++ V 
Sbjct: 154 QSMVTALGIEP-RMIEVTSHGQSNPLVPEAKGKGEAKNRRVEVTVR 198


>gi|116329778|ref|YP_799497.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332660|ref|YP_802377.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116122671|gb|ABJ80564.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116127527|gb|ABJ77619.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 363

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               ++L+ +   I+              +        I   +I       F+K+S    
Sbjct: 216 EPNSEKLETVKGTIAKAEPKFSWFEKKHELSSNPKFREIESKVIH------FEKNSIQIR 269

Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            E    L ++   +   + +   I GHT           N R+SL RA +    L  +G+
Sbjct: 270 KEAKPGLNRLSRWMKEDSSIRVKIFGHTS---LEGTEAANQRVSLLRAETVRDYLAGNGI 326

Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           S+DR  ++           +        NRR+++ + +
Sbjct: 327 SKDRF-EVIPKGASVPIGDNSKEEGKEMNRRVELRIRN 363


>gi|298374715|ref|ZP_06984673.1| OmpA family protein [Bacteroides sp. 3_1_19]
 gi|298269083|gb|EFI10738.1| OmpA family protein [Bacteroides sp. 3_1_19]
          Length = 658

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS     +   +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324
            RL+  RA S    L+  G+   R+    G+     K  +                    
Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627

Query: 325 ---------DPMNSANRRIDILVEDRQ 342
                    +  +  NRR +  V    
Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654


>gi|296447839|ref|ZP_06889751.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
 gi|296254639|gb|EFH01754.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
          Length = 202

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F ++S+    + + V +++G+ L           I GHTDA         N  LS  RA 
Sbjct: 94  FARNSATLRGKDLEVARQLGKALGDEKLAGGKFLIMGHTDAR---GSDEANQALSERRAE 150

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +   +L  + GV+ DR+  + G+    L+    P  + NRR+ ++
Sbjct: 151 AVKHLLTTEFGVAPDRLITV-GYGETHLENPKRPFAAENRRVQVV 194


>gi|269139917|ref|YP_003296618.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
           tarda EIB202]
 gi|267985578|gb|ACY85407.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
           tarda EIB202]
 gi|304559752|gb|ADM42416.1| Peptidoglycan-associated lipoprotein precursor; Outer membrane
           protein P6; OmpA/MotB precursor [Edwardsiella tarda
           FL6-60]
          Length = 170

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F        P+ +  L      L  +     ++ GHTD         
Sbjct: 57  LQMQELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER---GTPE 113

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            N  L   RA +    L   GVS D+I  +S +   +  +        + NRR  ++
Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169


>gi|86132811|ref|ZP_01051403.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85816765|gb|EAQ37951.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 368

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 13/109 (11%)

Query: 239 KSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            +S+   P    ++      L   +    + I  HTD+      A  N  LS  RA S  
Sbjct: 261 TNSATLTPAAKNIIDTRLMPLLAENPGVKLEIASHTDSR---GAASSNQDLSERRAQSVA 317

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
             L+  GV+   +   +GF   +LK         ++  ++ANRR +  +
Sbjct: 318 NYLISKGVNNSLLVA-NGFGERKLKNRCADGVSCTERQHAANRRTEFRL 365


>gi|259417580|ref|ZP_05741499.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346486|gb|EEW58300.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 166

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S   PE   +L      L A+   V++I GH D          N  L   R
Sbjct: 56  DRVLFLVDQSSISPEAQGILDGQARWLTANPAYVVTIEGHADER---GTREYNLALGARR 112

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A SA + L+  GV+  RI  +S +   R     +     + NRR
Sbjct: 113 ANSAREYLISQGVAASRIQTVS-YGKERPIEICSEQSCYNKNRR 155


>gi|254452426|ref|ZP_05065863.1| OmpA domain protein [Octadecabacter antarcticus 238]
 gi|198266832|gb|EDY91102.1| OmpA domain protein [Octadecabacter antarcticus 238]
          Length = 612

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 8/151 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250
           ++ L +     +S    + +       TT   +  I  + +     F+ SS+        
Sbjct: 424 IEKLGEAEEFEVSVTYVEALDPIAALPTTEECLDQIMNVTESRKITFEPSSARIAGAGAA 483

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L  I E+L    +  I I G+TD+         N RLS  RA +    L    V     
Sbjct: 484 ILDDITEILQRCADLRIEIAGYTDSQ---GSEDGNQRLSQQRADAVLDGLRVRRVPVASF 540

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             + G+        ++  +    NRRI+  +
Sbjct: 541 RSV-GYGEADPIADNETADGREANRRIEFSL 570


>gi|148827586|ref|YP_001292339.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
 gi|148718828|gb|ABQ99955.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
          Length = 153

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++     + +T     +  +  + NT  F         E + +L      L  
Sbjct: 18  AACSSSNNDAAGNGVAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 78  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 134 AVLGHDEAAYSKNRR 148


>gi|347157|gb|AAC36901.1| protein F [Pseudomonas fluorescens]
          Length = 296

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 7/257 (2%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           K IE  FNP  +     +  +    +  + +     D + ++ I  ++  L       + 
Sbjct: 42  KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 101

Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
                R      +   S+ +        RD      +        + N      +     
Sbjct: 102 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 161

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      +        +  +   A                +  ++       FD  
Sbjct: 162 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            ++  P +   ++ + + +A      + + GHTD+         N +LS  RA +  QVL
Sbjct: 222 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 278

Query: 300 MKSGVSEDRISKISGFA 316
           +K GV+  R++ + G+ 
Sbjct: 279 VKDGVAPSRVTAV-GYG 294


>gi|317012627|gb|ADU83235.1| flagellar motor protein MotB [Helicobacter pylori Lithuania75]
          Length = 257

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|260768865|ref|ZP_05877799.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           furnissii CIP 102972]
 gi|260616895|gb|EEX42080.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           furnissii CIP 102972]
 gi|315180558|gb|ADT87472.1| Peptidoglycan-associated lipoprotein [Vibrio furnissii NCTC 11218]
          Length = 179

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++    +   +L      L  +    ++I GH D          N  L   RA + 
Sbjct: 79  FAFDNATIASDYEEMLAAHAVYLTKNPSLKVTIEGHADER---GTPEYNIALGERRAQAV 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+I  I  +   +  +        + NRR  ++
Sbjct: 136 AKYLEALGVQADQI-AIVSYGEEKPLLLGQTEEVYAKNRRAVLV 178


>gi|254522358|ref|ZP_05134413.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
 gi|219719949|gb|EED38474.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
          Length = 432

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 13/228 (5%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G+   +   +R+ + +  +   Q  +       R            DL +          
Sbjct: 203 GNLPTEGDRRRIWSALLAVHGRQNVQGGITLDPRARAPRWLDRLIADLPQLQGDGLRLEF 262

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----- 230
                    +     +   ++ ++      L    +    L    +              
Sbjct: 263 AGSQLRIDTSQMEDAQRLAISHRLRQDFPALDMTGLWGPGLAALAQLPAQADATQRIEAL 322

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLS 288
            R T  F   ++    ++   +  +   L        +    HTD+      A  N +LS
Sbjct: 323 NRTTLKFHAGTATLTGDSRQTIGAVASALRAVPAGARVEVAAHTDS---AGSATTNQQLS 379

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRI 334
             RA +  Q L + GV    +   +G+   +    +  D   + NRRI
Sbjct: 380 QLRAEAVAQALQEQGVGSAALVP-TGYGQEQPIADNRSDHGRALNRRI 426


>gi|254439344|ref|ZP_05052838.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198254790|gb|EDY79104.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 637

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 8/151 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250
           ++ L +     +S    + +       TT   +  I  + +     F+ SS+        
Sbjct: 454 IEKLGEAEEFEVSVTYVEELDPIAALPTTEECLGQIMNVTESRKIRFEPSSATIAGAGAA 513

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L  I E+L    +  I I G+TD+         N RLS  RA +  + L    V     
Sbjct: 514 ILDDIKEILQRCADLRIEIAGYTDSQ---GSEDGNQRLSQQRADAVLEGLRVRRVPVASF 570

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             + G+        ++  +    NRRI+  +
Sbjct: 571 RSV-GYGEADPIADNETADGREANRRIEFSL 600


>gi|197106554|ref|YP_002131931.1| OmpA family protein [Phenylobacterium zucineum HLK1]
 gi|196479974|gb|ACG79502.1| OmpA family protein [Phenylobacterium zucineum HLK1]
          Length = 186

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 9/110 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD        +   +L    E L    +  + I G+ D          N  L   R
Sbjct: 76  DRVYFDLDQHDVRTDARPLLDAQAEWLRRYPQVRVRIEGNADER---GTREYNLALGARR 132

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR--RIDIL 337
           A S    L+  GV+ DRIS IS F   +         +   NR  R  I+
Sbjct: 133 ANSVRDYLVNRGVTSDRISTIS-FGKEQPLDPGTTEEAYQKNRNARTAIV 181


>gi|332307349|ref|YP_004435200.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174678|gb|AEE23932.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 287

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 12/150 (8%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +   +A  ++++   +  +N  + V      +   I+         + K+S+     +  
Sbjct: 141 QSDRIAVGLNASNFAVPYENFAQCVSNLLPYSFDDIAYT----ILAYQKNSTDLTKYSQR 196

Query: 251 VLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            L  IG+ L   +++  +   G++D+         N  LS+ RA        + GV+  R
Sbjct: 197 RLNMIGQYLKEDSDMELVLLDGYSDSY---GGRDMNKTLSVSRAVEIKNYFSEMGVAPQR 253

Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDI 336
           I +++G    R    +      + NRR+ I
Sbjct: 254 I-EVTGHGERRHIAPNSNEMSRAKNRRVVI 282


>gi|332188277|ref|ZP_08390004.1| ompA family protein [Sphingomonas sp. S17]
 gi|332011673|gb|EGI53751.1| ompA family protein [Sphingomonas sp. S17]
          Length = 175

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F +  +    E    L ++    A     + +RGH+D+         N R+S  RA +A 
Sbjct: 66  FPEGGAELDREAKAALDRLAADPAVRQGHLILRGHSDSD---GDDAGNRRMSRQRAEAAR 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRIDILVEDRQ 342
             L   G++  R+  +      R    +            + NRR++I ++   
Sbjct: 123 DYLAGKGIASARMK-VIALGETRPIAPNAKPDGTDDSAGRARNRRVEIELDRAN 175


>gi|89094844|ref|ZP_01167777.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
           MED92]
 gi|89080899|gb|EAR60138.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
           MED92]
          Length = 171

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+        L+K    L+ +     +  GH D          N  L   RA + 
Sbjct: 68  FDFDKSVVKAAGFADLEKHAAYLSANPSAQVVLEGHADER---GTREYNIALGERRAKAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            + L  +G S  +I  +S F   +  +        S NRR+++
Sbjct: 125 ARFLQVNGASGSQIETVS-FGEEKPAVLGHSEASWSQNRRVEL 166


>gi|84385524|ref|ZP_00988555.1| Outer membrane protein [Vibrio splendidus 12B01]
 gi|84379504|gb|EAP96356.1| Outer membrane protein [Vibrio splendidus 12B01]
          Length = 278

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 11/207 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198
            K  L    ++G   C    + ++I K+            + A      ++KRL +L  +
Sbjct: 67  AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQ 126

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    S    +       F    + I            F ++S+   P+ +  L +   +
Sbjct: 127 LDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTL 186

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       + + GH DA+        N  L+L RA    + L   G+   RI  +S    
Sbjct: 187 LKEHKSLDLVVTGHADAT---GTEEYNDDLALGRAKQVERYLTIFGLGAQRIKAVS-VGE 242

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +   NRR+ I +   +
Sbjct: 243 TVPLFEGESDGTRLTNRRVSIEIISPK 269


>gi|148546407|ref|YP_001266509.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148510465|gb|ABQ77325.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 325

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +  K+             ++Q    K+++T +  K     +S+         ++    
Sbjct: 23  SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 80

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                KI     +  L +   K+   +     +   +  +   T         D+ N  +
Sbjct: 81  GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    P ++  + ++ + +       + + GH D+      A  N +LSL+RA S 
Sbjct: 141 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 188

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +   SG+  DR+  + G      + A+D       NRR+++L+  + 
Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 236


>gi|307637506|gb|ADN79956.1| Flagellar motor rotation protein [Helicobacter pylori 908]
 gi|325996095|gb|ADZ51500.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
 gi|325997691|gb|ADZ49899.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
          Length = 257

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|254491000|ref|ZP_05104181.1| OmpA family protein [Methylophaga thiooxidans DMS010]
 gi|224463513|gb|EEF79781.1| OmpA family protein [Methylophaga thiooxydans DMS010]
          Length = 171

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F    +    E+ V  Q    ++L  S   + I GHTD       +  N  LSL RA  
Sbjct: 69  FFLLDKTEFTAESRVESQEIYQKILDRSFGEVVITGHTDT---SASSAYNEALSLRRAQK 125

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             Q L+  GV  D + +IS    +RL +    D +   NRR++I
Sbjct: 126 VRQQLIDFGVPADSV-RISAEGEYRLLVSTPDDTVEVRNRRVEI 168


>gi|218262635|ref|ZP_03477017.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223264|gb|EEC95914.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
           DSM 18315]
          Length = 663

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS         +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 517 ISKPVVIENIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGSEQYN 573

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------------- 325
            RL+  RA S    L+  G+++DR+    G+     K  +                    
Sbjct: 574 ERLAQRRAQSVVDYLIAGGIAQDRLEA-KGYGESVPKTINKKMAKNYDFLNEGDVLTEEF 632

Query: 326 ----PMNSA------NRRIDILVEDRQ 342
                          NRR +  V    
Sbjct: 633 IDKLTPEQQEIADQINRRTEFKVLRTN 659


>gi|255036435|ref|YP_003087056.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254949191|gb|ACT93891.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 464

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + + +     +  L  I        ++  + +GHTD +        N  LS  R  + 
Sbjct: 359 FSQGTEVLEDSALSDLDSIVSYFQKRQDLRLVLKGHTDNT---GSFEKNLELSNKRVETV 415

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              L+  G+  +RI + SG+   + +  +    +   NRR+++
Sbjct: 416 KAYLIGKGIIAERI-EGSGYGSAQPRQMNQTEATKKSNRRVEV 457


>gi|298372620|ref|ZP_06982610.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275524|gb|EFI17075.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 681

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +     ++        E+   L  + ++L  +  +   +  HTD+         N  LS 
Sbjct: 540 KMENIFYEFGKWNITKESEAELNNLVKLLEDNPNITIELSAHTDSV---GTDASNIELSQ 596

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            RA SA + L+ +G+++DR++   G+  ++  I
Sbjct: 597 KRANSAVEYLIGAGIAKDRLTA-KGYGENKPVI 628


>gi|315180802|gb|ADT87716.1| sodium-type flagellar protein MotY [Vibrio furnissii NCTC 11218]
          Length = 294

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 83/297 (27%), Gaps = 14/297 (4%)

Query: 48  FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           F+ +   +       +   +Y     ++    +     E             +       
Sbjct: 9   FVALSACSTFAASALEK--RYVATPQQSSWQMATNTPLECRLVHPIPNYGEAVFTSHASK 66

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
           K ++D ++       + + +                + +  +  ++             +
Sbjct: 67  KINLDFELKMRRPMGETRNVSLVSMPPVWRPGESADRITNIQFFKQFDGYVGGQTAWALL 126

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           ++ E    P  S +   +  ++  +      +S+ L     +     V      +   IS
Sbjct: 127 SELEQGRYPTFSYQDWQSRDQRIEVA-----LSAVLFQPQYNAFSDCVASLLPYSFEDIS 181

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
                        S      +   L +I E + ++ ++  +   T              L
Sbjct: 182 FTILHYD---RGDSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNES-QSL 237

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           S  RA S  +     G+  DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 238 SDKRAESLQKYFESLGLPSDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|254492390|ref|ZP_05105562.1| OmpA family protein [Methylophaga thiooxidans DMS010]
 gi|224462282|gb|EEF78559.1| OmpA family protein [Methylophaga thiooxydans DMS010]
          Length = 281

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 89/298 (29%), Gaps = 26/298 (8%)

Query: 47  FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106
           FF +++ +     +  +A      P         +   +           +         
Sbjct: 6   FFALLFAL-PVSAEQFQA------PVTDTQWQVIESPLECSLMQSIPGFGEAGFYRRNGG 58

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
             +     I  ++  KQ   L         +++      S   +  + +        +++
Sbjct: 59  ALSL--SFISQSHAAKQNNVLFQIAEAPWQNKEQRQTLTSQPTELGQTRFSLNGVLAQQA 116

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           +++ +    P +               ++   +S+        +  + +      T   +
Sbjct: 117 LSQMQEGRFPVIEYPSQSYS------DNVTVMLSTVKFNDSFASFQQCLSHLHPDTFGEV 170

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDN 284
                + T  F+   +   P     L ++ E +    S   I I  HTD        R N
Sbjct: 171 ----NKLTVYFEIEQATLTPVAKKALTRLAEYVKVDDSINQIKIASHTDN---HGRRRLN 223

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             LS  RA S  + L+      +++  I+ +   +   ++      + NRR +I +  
Sbjct: 224 EPLSDARALSIKRFLITEFEIPEQLISINSYVEAKPTASNKTPLGRAKNRRAEITLVR 281


>gi|126176195|ref|YP_001052344.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|160877206|ref|YP_001556522.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|304412239|ref|ZP_07393848.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307306983|ref|ZP_07586723.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|125999400|gb|ABN63475.1| OmpA/MotB domain protein [Shewanella baltica OS155]
 gi|160862728|gb|ABX51262.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|304349505|gb|EFM13914.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306910561|gb|EFN40991.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|315269410|gb|ADT96263.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 202

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    ++++   L        +I GHT  +        N  LS 
Sbjct: 74  KEINILFPNDSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           DRA +   VL +   +   R++ I G+   R  +     ++   NRR+
Sbjct: 131 DRANAVTAVLAERFSIDRSRLTAI-GYGSSRPVVLEQTPDAEIRNRRV 177


>gi|255261508|ref|ZP_05340850.1| OmpA family domain protein [Thalassiobium sp. R2A62]
 gi|255103843|gb|EET46517.1| OmpA family domain protein [Thalassiobium sp. R2A62]
          Length = 308

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS         L  + E L+ +      + GHTD+         N  LS  RA S 
Sbjct: 203 FQVGSSNLGDAAFASLDLLAEYLSANPNKTIALVGHTDS---SGPLNGNIALSKRRASSV 259

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L +  G+   ++    G  +      +        NRR++++V   +
Sbjct: 260 LDRLTRDYGIPRRQMEA-EGMGYLSPLSTNLTQEGRDLNRRVEVIVTSTE 308


>gi|127512457|ref|YP_001093654.1| OmpA domain-containing protein [Shewanella loihica PV-4]
 gi|126637752|gb|ABO23395.1| OmpA domain protein [Shewanella loihica PV-4]
          Length = 180

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    +   VL   GE L       + I GH D          N  L  
Sbjct: 74  KEHIIYFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEGHADER---GTPEYNIALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +  + L   GV   ++S +S +   + +    +D   + NRR  ++
Sbjct: 131 RRAKAVAKYLQSMGVLPSQMSIVS-YGEEKPQDFSRTDDGFAKNRRAVLV 179


>gi|110678461|ref|YP_681468.1| OmpA family domain-containing protein [Roseobacter denitrificans
           OCh 114]
 gi|109454577|gb|ABG30782.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
          Length = 221

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288
              T  FD  S+    E    + +I E L  +       + G TDA         N +L 
Sbjct: 21  DIGTINFDFDSAELDAEAQAKIVEIAEQLKENPSYKPTVLIGFTDAVGGVG---YNDQLG 77

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L RA +    L++ GVS DRI  +S      L ++       NRR+ + +
Sbjct: 78  LRRANAVSAALLEQGVSVDRIGTVSSRGERELLVSVAGPERLNRRVTVTL 127


>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 335

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 14/119 (11%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286
           I    N   FD  S +  P    +L ++   L        + +G+TDA         N +
Sbjct: 214 IPAMTNAVHFDFDSEV--PLQTHILVEVARHLNQYPSASVVLQGYTDAVGPSG---YNLK 268

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI-----DILV 338
           LS  RA S    L K  VS+ +I  I        ++ +      + NRR+     +I V
Sbjct: 269 LSKRRAVSVAAYLKKLEVSDAQI-SIEALGETHPELDNITEEHRANNRRVYISIPEITV 326


>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
 gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
          Length = 358

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 230 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|62999040|gb|AAY25026.1| major outer membrane protein [Aeromonas hydrophila]
          Length = 344

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F        PE +  L  + + +           + G+TD          N +LS
Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337
             RA +    L+  G++  ++  + G         +               + +RRI++ 
Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRIEVR 335

Query: 338 VEDRQ 342
           V   Q
Sbjct: 336 VSGVQ 340


>gi|304395220|ref|ZP_07377104.1| OmpA/MotB domain protein [Pantoea sp. aB]
 gi|304357473|gb|EFM21836.1| OmpA/MotB domain protein [Pantoea sp. aB]
          Length = 157

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + S   P +   +Q + + LA +  E + I GHTD          N +LSL R
Sbjct: 49  DKILFGVNESELTPSSKSNIQGMAKNLASTGIEHVRIDGHTDNY---GKPDYNQQLSLKR 105

Query: 292 AYSA-YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +   Q    + +    I    G        +++     + NRR+ I++   
Sbjct: 106 ANAVAAQWAEGASIPRGNIVT-RGLGMSAPVTSNNSAQGRAQNRRVAIVITAP 157


>gi|86145932|ref|ZP_01064260.1| putative outer membrane protein [Vibrio sp. MED222]
 gi|85836387|gb|EAQ54517.1| putative outer membrane protein [Vibrio sp. MED222]
          Length = 204

 Score = 76.5 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
           S  ++    +F   S+   P  +  ++++   L       I ++G+         A  N 
Sbjct: 76  SSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKV---GNAEHNL 132

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAH--HRLKIASDPMNSANRRIDILVEDRQG 343
           +LS  RA +  + L+ +G+   R   + G+     R    ++  ++ NR++   V   +G
Sbjct: 133 KLSEKRADNVRRALISNGIPPSRAYTV-GYGDVGFR-DNDTETNHALNRKVVASVVGFKG 190


>gi|259417800|ref|ZP_05741719.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346706|gb|EEW58520.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 345

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S+         L+++ E L  +    I + GHTD          N  LS  RA S 
Sbjct: 241 FDTASTQMGEGPFDSLRQLAEFLDQNKSATILLVGHTDTV---GGLEGNIALSRRRAISV 297

Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L  + G+   RI +++G  +      +        NRR++ ++
Sbjct: 298 RERLTTRYGIDGGRI-QVAGAGYMAPLAPNTTETGRETNRRVEAVL 342


>gi|149927733|ref|ZP_01915985.1| outer membrane protein [Limnobacter sp. MED105]
 gi|149823559|gb|EDM82789.1| outer membrane protein [Limnobacter sp. MED105]
          Length = 174

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     E   ++Q   + L  +     + +G+TD       A  N  L   
Sbjct: 68  KRSVYFDYDSYTVKSEYRELVQNHAKYLVANPNRKVVVQGNTDER---GGAEYNLALGQR 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +   +++  GV E +I  +S F   + K   +++   + NRR DI+
Sbjct: 125 RADAVKTLMLALGVKEGQIETVS-FGKEKPKATGSNEAAYAENRRSDIV 172


>gi|332673379|gb|AEE70196.1| flagellar motor protein MotB [Helicobacter pylori 83]
          Length = 255

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|325518447|gb|EGC98149.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
          Length = 207

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 81  QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 137

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV  ++I    G             N  N           RR+++ V 
Sbjct: 138 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 194

Query: 340 DRQ 342
             Q
Sbjct: 195 GTQ 197


>gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 368

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRI---D 335
            RA +    ++  GV+   ++ + G+        +               + +RR+   +
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVNASE 357

Query: 336 ILVEDRQ 342
           I V+  +
Sbjct: 358 IQVQGSK 364


>gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 370

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRI---D 335
            RA +    ++  GV+   ++ + G+        +               + +RR+   +
Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVIHPE 359

Query: 336 ILVEDRQ 342
           I V+  +
Sbjct: 360 IQVQGSK 366


>gi|332663673|ref|YP_004446461.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332487|gb|AEE49588.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 846

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 35/155 (22%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTD 273
           V  E     I        +  ++  +     PE+   L  + +++    E+ I +  HTD
Sbjct: 527 VKEEPEYDTITTEQPILLDNIVYGYNDDKITPESEPDLNLVLDLMKKYPEMVIELSSHTD 586

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK------------ 321
              +R     N  LS  RA SA + L++ G++  RI    G+   + K            
Sbjct: 587 ---YRGRDEYNQDLSQRRAESARKWLLQKGIASSRIQA-KGYGEAQPKPVNEKMASEFLF 642

Query: 322 -----------IAS-------DPMNSANRRIDILV 338
                      I +       +  +  NRR +  +
Sbjct: 643 MTPKDTLTQDFIDNLATKEEQEAAHQLNRRTEFKI 677


>gi|301308400|ref|ZP_07214354.1| OmpA family protein [Bacteroides sp. 20_3]
 gi|300833870|gb|EFK64486.1| OmpA family protein [Bacteroides sp. 20_3]
          Length = 658

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS     +   +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324
            RL+  RA S    L+  G+   R+    G+     K  +                    
Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627

Query: 325 ---------DPMNSANRRIDILVEDRQ 342
                    +  +  NRR +  V    
Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654


>gi|256824209|ref|YP_003148169.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Kytococcus sedentarius DSM 20547]
 gi|256687602|gb|ACV05404.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Kytococcus sedentarius DSM 20547]
          Length = 437

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  SS     E+ V   +IGE LA     + + GHTD+         N RLS  RA    
Sbjct: 338 FPSSSDALYGESAVNAARIGEKLAGCDFDVVVVGHTDSV----GGEVNERLSAFRAEKIA 393

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           Q L+ +GV  DRI + +  +  +   +++     + NRR++ILV+
Sbjct: 394 QALVVAGVDFDRIQQSNA-SASQPIASNETEDGRAKNRRVEILVK 437


>gi|208434727|ref|YP_002266393.1| flagellar motor rotation protein [Helicobacter pylori G27]
 gi|208432656|gb|ACI27527.1| flagellar motor rotation protein [Helicobacter pylori G27]
          Length = 257

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|150010324|ref|YP_001305067.1| outer membrane protein OmpA family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255012413|ref|ZP_05284539.1| outer membrane protein OmpA family protein [Bacteroides sp. 2_1_7]
 gi|262382396|ref|ZP_06075533.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
 gi|149938748|gb|ABR45445.1| outer membrane protein OmpA family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|262295274|gb|EEY83205.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
          Length = 658

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS     +   +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324
            RL+  RA S    L+  G+   R+    G+     K  +                    
Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627

Query: 325 ---------DPMNSANRRIDILVEDRQ 342
                    +  +  NRR +  V    
Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654


>gi|308062136|gb|ADO04024.1| flagellar motor protein MotB [Helicobacter pylori Cuz20]
 gi|308063396|gb|ADO05283.1| flagellar motor protein MotB [Helicobacter pylori Sat464]
          Length = 255

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|260582095|ref|ZP_05849889.1| outer membrane protein P5 [Haemophilus influenzae NT127]
 gi|260094727|gb|EEW78621.1| outer membrane protein P5 [Haemophilus influenzae NT127]
          Length = 350

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  +   ++      +++ G+TD          N +LS +RA S 
Sbjct: 237 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 293

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
               +  GV+ D IS  +G+           D +            +RR++I V   +
Sbjct: 294 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 350


>gi|145636351|ref|ZP_01792020.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
 gi|145270516|gb|EDK10450.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
          Length = 153

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 18  AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 78  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 134 AVLGHDEAAYSKNRR 148


>gi|320325666|gb|EFW81728.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 381

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +    +    V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+     K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDKAQAKPDAVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|255008683|ref|ZP_05280809.1| OmpA family membrane protein [Bacteroides fragilis 3_1_12]
 gi|313146419|ref|ZP_07808612.1| outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313135186|gb|EFR52546.1| outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 224

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F  +SS     +   L +   +L       ++I GHTD          N ++S +
Sbjct: 108 PSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV---GTYEANQKVSSN 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RAY+    L   GV   +  K+ G  + +    ++     NRR++I +   +
Sbjct: 165 RAYAVENYLQSCGVKPYQFKKVEGVGYSQ-YNEAETPE-QNRRVEIFMYASE 214


>gi|171061026|ref|YP_001793375.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170778471|gb|ACB36610.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 558

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 12/164 (7%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSS 242
            A    +R+ D    I               V         L     + +  + F   + 
Sbjct: 381 AASDEAQRIADAQGFIGQLPDASEPGAAAVAVADLPPAYRALTDGGRRLSVNLRFVAGAE 440

Query: 243 IPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
               +    + +I  +L       E + + G +DA         N RLS  RA +    L
Sbjct: 441 GLDNKARRDMGRIVRLLERRLKQDERVMLLGFSDAL---GGDCANQRLSQQRATAVATEL 497

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
              GV       + GF       +++       NRR+++ +  +
Sbjct: 498 ATYGVRPA---VVHGFGSAAPIASNETGAGRERNRRVEVWLTSK 538


>gi|149371350|ref|ZP_01890836.1| OmpA/MotB [unidentified eubacterium SCB49]
 gi|149355488|gb|EDM44047.1| OmpA/MotB [unidentified eubacterium SCB49]
          Length = 247

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           I  + +T  F  ++     + +   L KI   L +  ++   I GHTD+         N 
Sbjct: 136 IHIKNHTIEFKYNAPQITDDHSFKQLDKIVSYLKNDPQITVKITGHTDSI---GSDNFNK 192

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LSL RA +  +  +   +   RI  I+G      K     + S NRR++I +
Sbjct: 193 SLSLKRANAVKRYFLSKKIDTRRII-INGMGEKSPKSK---LASQNRRVEIEL 241


>gi|149193985|ref|ZP_01871083.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
 gi|149135938|gb|EDM24416.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
          Length = 196

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 61/176 (34%), Gaps = 15/176 (8%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGI 224
                EN  +   +      M  ++++    + +++  + +  +N+    V     +   
Sbjct: 21  KQPNLENAQMQENNATVQEQMTNQQQVVTQPETVNTENANVQEENLTATTVTVSKMQNNQ 80

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIAR 282
             +         FD       P+    ++K+ +++  +    ++   G+ D         
Sbjct: 81  EFAKKLASIVVYFDFDKYNIRPDQWPKVEKLAKLIKKNPSNYTVRIEGNCDEW---GTEE 137

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----NRR 333
            N+ L L RA S    L+K GV   +++ IS +            ++      NRR
Sbjct: 138 YNYALGLKRANSVKNALIKLGVDPKKLTIIS-YGELNPVC---TAHAKWCWRLNRR 189


>gi|186475502|ref|YP_001856972.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184191961|gb|ACC69926.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 215

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 18/115 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD   +I  P     L  +   +      + +  G+TD        + N RLSL RA +
Sbjct: 101 LFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
               L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 158 VKAYLVSKGIEANRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|108563226|ref|YP_627542.1| flagellar motor protein MotB [Helicobacter pylori HPAG1]
 gi|107836999|gb|ABF84868.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
          Length = 257

 Score = 76.2 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  AIIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|217976969|ref|YP_002361116.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
 gi|217502345|gb|ACK49754.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
          Length = 169

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 10/163 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +     +   AK  +   + L +     G     +     +++ D+     F+  SS
Sbjct: 13  AAVLGAALAISACAKNPAEDPNALASSAGRGGPAIPGSPQDFAVNVGDR---VFFESDSS 69

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                    L K    L    +   ++ GH D          N+ L   RA +A   L+ 
Sbjct: 70  ELSSTAQATLDKQARWLRQYAKANFTVEGHADER---GTREYNFALGARRAEAAKAYLVA 126

Query: 302 SGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQ 342
            G+    I  IS +   R     +D    S NRR   ++   Q
Sbjct: 127 RGIPAAGIHTIS-YGKERPVAVCNDISCWSQNRRAVTVLAGSQ 168


>gi|256839169|ref|ZP_05544679.1| outer membrane protein OmpA family protein [Parabacteroides sp.
           D13]
 gi|256740088|gb|EEU53412.1| outer membrane protein OmpA family protein [Parabacteroides sp.
           D13]
          Length = 658

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 34/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           IS     +   +D   +   PE+   L ++ ++L  +    I +  HTD    +   + N
Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324
            RL+  RA S    L+  G+   R+    G+     K+ +                    
Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKMINKKMAKQFDFLKEGDVLTEEF 627

Query: 325 ---------DPMNSANRRIDILVEDRQ 342
                    +  +  NRR +  V    
Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654


>gi|160898836|ref|YP_001564418.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
 gi|160364420|gb|ABX36033.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
          Length = 180

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +   +    ++     L  S+     I GHTD          N  L   RA 
Sbjct: 77  VYFDFDSYVVKADAQPQIEAHARFLKASSARKVQIEGHTDER---GGREYNLALGQKRAE 133

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           +  + L   GVS+ ++  +S +   +        +  + NRR ++
Sbjct: 134 AVRRSLGLLGVSDAQMEAVS-YGKEKPAAEGHSEDAYAQNRRAEL 177


>gi|114799403|ref|YP_759662.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114739577|gb|ABI77702.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 282

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  +     F   ++   P ++ ++  +G + A      I I  HTD          N R
Sbjct: 170 VTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTR---GADDYNQR 226

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           +S +RA +    L+   ++E+ ++ + G+   +           + NRR    V+ R
Sbjct: 227 VSQERADAIRAYLLGKELAEETLTAV-GYGETQPIDTGSTAEAHARNRRTVFTVKQR 282


>gi|30314412|gb|AAP15415.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
          Length = 150

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMETVS-LGKEKPQATGHDETSWAQNRRADLV 147


>gi|313497490|gb|ADR58856.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 325

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +  K+             ++Q    K+++T +  K     +S+         ++    
Sbjct: 23  SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 80

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                KI     +  L +   K+   +     +   +  +   T         D+ N  +
Sbjct: 81  GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    P ++  + ++ + +       + + GH D+      A  N +LSL+RA S 
Sbjct: 141 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 188

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +   SG+  DR+  + G      + A+D       NRR+++L+  + 
Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 236


>gi|260431085|ref|ZP_05785056.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414913|gb|EEX08172.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 209

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+        +L +    +    E    + GHTDA         N+ L L RA + 
Sbjct: 65  FAFDSAQLDASAQRILLQQANWIKQFPEARFRVYGHTDAV---GSQSYNYNLGLRRANAV 121

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA 323
              L++ G+S  R+  +  F   R  +A
Sbjct: 122 VNFLVQQGISRSRLEALVSFGKTRPLVA 149


>gi|237807905|ref|YP_002892345.1| OmpA domain-containing protein transmembrane region-containing
           protein [Tolumonas auensis DSM 9187]
 gi|237500166|gb|ACQ92759.1| OmpA domain protein transmembrane region-containing protein
           [Tolumonas auensis DSM 9187]
          Length = 341

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD + S   P     +  L    + L    + I + G+TD          N +LS 
Sbjct: 217 SDVLFDFNKSTLKPAGVTALSQLYNQIQTLEMDDKNIVVYGYTDRI---GSDGYNLKLSQ 273

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
           DRA +    L   G+S  RI+ + G         +               + +RR++I V
Sbjct: 274 DRAKTVSDFLTTKGLSATRITAV-GRGEADPVSPASCNAIKAKKDLIVCLAPDRRVNIEV 332

Query: 339 EDRQ 342
           +  +
Sbjct: 333 KGTK 336


>gi|325279496|ref|YP_004252038.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324311305|gb|ADY31858.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 782

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 34/136 (25%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +     PE    L+++  +L  +  +   +  HTD          N  LS  RA + 
Sbjct: 544 FDVAKWELRPEARQNLEELLTILEDNPNITIELSAHTD---MVGNDEANRILSEHRARAV 600

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS-----------------------------DP 326
              L+  GV  DR+    G+   + +  +                             + 
Sbjct: 601 VDYLIGKGVYWDRLEA-KGYGETQPRQINEKDAREYPFFKVGEVLNERFFGRLRGEQRET 659

Query: 327 MNSANRRIDILVEDRQ 342
               NRRI+  V    
Sbjct: 660 ALQLNRRIEFKVLRTN 675


>gi|221196399|ref|ZP_03569446.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD2M]
 gi|221203071|ref|ZP_03576090.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD2]
 gi|221177005|gb|EEE09433.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD2]
 gi|221182953|gb|EEE15353.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD2M]
          Length = 163

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +LQ     L       + I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GV   ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161


>gi|330984878|gb|EGH82981.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 381

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +         V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+ +   K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSTPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|312129228|ref|YP_003996568.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311905774|gb|ADQ16215.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 705

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD+S +    E+ V L +I +++    +++ +  GHTD       A  N++L+  R
Sbjct: 597 REVYFDQSKAELRQESFVELDRIKKIMMEHPDMVILLEGHTDNQ---GDANLNFKLAEQR 653

Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             +    L++ G + E+RI ++  +  +R  + +        NRR++  +  
Sbjct: 654 ILNVKNYLIEDGQIKEERI-QLKSWGQYRPLVKNTTEEERRKNRRVEFTILK 704


>gi|309244385|gb|ADO52197.1| OprL [Pseudomonas sp. AF32]
          Length = 156

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150


>gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
 gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
          Length = 357

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++I+   G         +      P  +       +RR++I 
Sbjct: 286 QRRADSVRDYLVSKGIPAEKITA-RGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIE 344

Query: 338 VED 340
           V+ 
Sbjct: 345 VKG 347


>gi|115522932|ref|YP_779843.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516879|gb|ABJ04863.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 219

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+    + +  +  +G+ L++         + GHTDA         N  LS  RA 
Sbjct: 110 FDYNSANISAKALKAVDALGKALSNPDLKGSTFVVAGHTDAV---GSEPYNQDLSERRAD 166

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L+   G++   +  + G+   +LK AS P    NRR+ ++
Sbjct: 167 AIKRYLVDKFGIAGTDLVTV-GYGESKLKDASAPTAGVNRRVQVV 210


>gi|298717317|ref|YP_003729959.1| OmpA-family outer membrane protein YfiB [Pantoea vagans C9-1]
 gi|298361506|gb|ADI78287.1| Putative OmpA-family outer membrane protein precursor yfiB [Pantoea
           vagans C9-1]
          Length = 157

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + S   P + + +Q + + LA +  + + I GHTD          N +LSL R
Sbjct: 49  DKILFGVNESELTPSSKLTIQGMAKNLASTGIKHVRIDGHTDNY---GKPDYNQQLSLKR 105

Query: 292 AYSA-YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +   Q    + +  + I    G        +++     + NRR+ I++   
Sbjct: 106 ANAVAAQWAEGAAIPRENIVT-RGLGMSSPVASNNSAQGRAQNRRVAIVITAP 157


>gi|120599218|ref|YP_963792.1| OmpA domain-containing protein [Shewanella sp. W3-18-1]
 gi|146292708|ref|YP_001183132.1| OmpA domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120559311|gb|ABM25238.1| OmpA domain protein [Shewanella sp. W3-18-1]
 gi|145564398|gb|ABP75333.1| OmpA domain protein [Shewanella putrefaciens CN-32]
 gi|319426012|gb|ADV54086.1| peptidoglycan-associated lipoprotein [Shewanella putrefaciens 200]
          Length = 178

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   S    E   +L+  G  L     V   I GH D          N  L   R
Sbjct: 74  HIIYFDFDRSEVQTEFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGERR 130

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           A +  + L   GV   ++  +  +   +    S        NRR  ++
Sbjct: 131 AKAVAKYLQGMGVQPSQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177


>gi|315223632|ref|ZP_07865486.1| outer membrane protein A [Capnocytophaga ochracea F0287]
 gi|314946413|gb|EFS98408.1| outer membrane protein A [Capnocytophaga ochracea F0287]
          Length = 340

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +    +  V L KI   L  +    I+I+ HTD+         N  L+  +A S 
Sbjct: 232 FNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSR---GEDGYNMNLTETQAQSI 288

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
           YQ L+  G+S +R++   G+   +L          S+  + AN+R++ ++ ++
Sbjct: 289 YQWLVSKGISPNRLTA-KGYGETQLVNGCENGVPCSEEEHQANKRVEFIIIEK 340


>gi|256820532|ref|YP_003141811.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582115|gb|ACU93250.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 340

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +    +  V L KI   L  +    I+I+ HTD+         N  L+  +A S 
Sbjct: 232 FNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSR---GEDGYNMNLTETQAQSI 288

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
           YQ L+  G+S +R++   G+   +L          S+  + AN+R++ ++ ++
Sbjct: 289 YQWLVSKGISPNRLTA-KGYGETQLVNGCENGVPCSEEEHQANKRVEFIIIEK 340


>gi|254780953|ref|YP_003065366.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040630|gb|ACT57426.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
          Length = 190

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 10/146 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +              G++       I   I        F         + + +LQ I  +
Sbjct: 47  LDKAEDEFQMQLQDTGIVVSRIGDMITCYI---PVHVSFVS-EVFLEKKFLPMLQLIATI 102

Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L      +  I+ HTD+       ++N  +S +RA      L++ GVS +R   + GFA+
Sbjct: 103 LNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159

Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341
                 +D       N+RI+I +  R
Sbjct: 160 KYPIDTNDTKVGRQNNQRIEIQIFPR 185


>gi|145579534|pdb|2HQS|H Chain H, Crystal Structure Of TolbPAL COMPLEX
 gi|145579536|pdb|2HQS|C Chain C, Crystal Structure Of TolbPAL COMPLEX
 gi|145579538|pdb|2HQS|E Chain E, Crystal Structure Of TolbPAL COMPLEX
 gi|145579540|pdb|2HQS|G Chain G, Crystal Structure Of TolbPAL COMPLEX
 gi|223673846|pdb|2W8B|C Chain C, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673847|pdb|2W8B|E Chain E, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673848|pdb|2W8B|G Chain G, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673849|pdb|2W8B|H Chain H, Crystal Structure Of Processed Tolb In Complex With  Pal
          Length = 118

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           ++ Q N   FD        +   +L      L  +     ++ GH D          N  
Sbjct: 1   MLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIS 57

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           L   RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 58  LGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 109


>gi|104780481|ref|YP_606979.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
 gi|95109468|emb|CAK14169.1| putative outer membrane protein, OmpA family [Pseudomonas
           entomophila L48]
          Length = 322

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 18/229 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +  K+             ++Q    K ++T +  K     +S+         E     
Sbjct: 22  SQDASKEGGLSWWPFGSDKVAEQE--VKAAVTENVAKADAKSESSSRWWWPFGSEEKKPA 79

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             +  KI     +  L     K+   + G   +   +  +   T         D+ N  +
Sbjct: 80  AAAVPKIDQKATQAWLDQYEPKVREAIKGSKLELERREDVLAVTIPVDSSYNPDRPNMLL 139

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    P T+  + ++ +V+   +   + I GH D+         N +LSL+RA S 
Sbjct: 140 ---------PITLGPITQVAKVIETDTKTAVLILGHADS---SGATAANQKLSLERAASV 187

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +   SG+  DR+  + G      + A+D       NRR+++L+  + 
Sbjct: 188 SAIFRLSGLQRDRLM-LKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 235


>gi|163751256|ref|ZP_02158484.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
 gi|161328970|gb|EDQ00044.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
          Length = 178

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 7/164 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            LS     +          +   S   +G V    V  +L    +  +    + + +   
Sbjct: 18  ALSACSSTSESETDATSSTSGSGSELATGGVETGGVAPILTPEEQQRLKYQELRKEHIIY 77

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S+   +   VLQ  G  L     V   I GH D          N  L   RA + 
Sbjct: 78  FDFDRSLVSAQFAEVLQAHGNYLVEHPNVRLMIEGHADER---GTPEYNIALGERRAKAV 134

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV   ++S +S +   +    S   +  + NRR  ++
Sbjct: 135 AKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDSFAINRRAVLV 177


>gi|308182972|ref|YP_003927099.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
 gi|308065157|gb|ADO07049.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
          Length = 255

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|103487471|ref|YP_617032.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98977548|gb|ABF53699.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 373

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289
                FD   S   PE    L           +   I + GH D       AR N  LS 
Sbjct: 261 PYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADR---SGSARYNVGLSE 317

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            R  +    L   G+S+  IS    F   R  +A+     N  NRR++I 
Sbjct: 318 RRNDAVRSYLTARGISDGSISA-QAFGETRPAVATADGVRNDQNRRVEIT 366


>gi|327479764|gb|AEA83074.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
          Length = 297

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F  S           L  I + L        I + GH+D          N  LS  RA +
Sbjct: 178 FPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDN---SGNRLVNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
             + L+ +GV E +I  +         +A+      + NRR+
Sbjct: 235 VQEYLIANGVPEQQI-TVRFHGERYPLVANSSEANRAKNRRV 275


>gi|261253096|ref|ZP_05945669.1| outer membrane protein [Vibrio orientalis CIP 102891]
 gi|260936487|gb|EEX92476.1| outer membrane protein [Vibrio orientalis CIP 102891]
          Length = 204

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 16/135 (11%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   V ++     + E  +  + I         +F   S    P     +Q + + L   
Sbjct: 60  IGAQVDNDGCGAAIVEEEQRQLRI---------LFANDSYEINPIFSDQIQTMAQFLEKY 110

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I I+G+            N  LS  RA++    L+   V   R+  I G+   RL+
Sbjct: 111 QSASIQIQGYASKV---GDPEYNLELSKKRAHAVEDELLYFEVDPKRV-TIVGYGESRLE 166

Query: 322 I--ASDPMNSANRRI 334
                +  ++ NRR+
Sbjct: 167 AEGDDETSHALNRRV 181


>gi|242279927|ref|YP_002992056.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242122821|gb|ACS80517.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 240

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             ++  +    V  +     + I +   R    F    +I   +T   L ++ EVL  S 
Sbjct: 98  EDVLYRSDDGAVSMKEEDGELKIVM---RGNAFFAPGQNIFEDKTRQYLAEVAEVLKTSK 154

Query: 264 EVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321
             I I GHTDAS    +   N + LS  RA    + L+    +   RI  +SG      +
Sbjct: 155 HAIHIIGHTDASDAAKVGAQNSFELSARRAAKVAEFLINTKSIDPVRII-VSGRGGVAPE 213

Query: 322 IASDPM--NSANRRIDILV 338
           +  D       NRR++I+V
Sbjct: 214 LPDDMGKVEGNNRRVEIVV 232



 Score = 39.9 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 54/176 (30%), Gaps = 2/176 (1%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
            + D   + +  W + ++D M V+   F+V++I +    +  K I +        +  A 
Sbjct: 16  KSGDADTSGMNGWAVPWSDLMMVMFVLFVVLFIYSQ-SKENIKVIFEGNAQSEVAMNPAD 74

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
             I       +  S +   +   E +   S D  +    +  + + +     + +  Q  
Sbjct: 75  GLIEMISFHRDAMSSSARVIMTPEDVLYRSDDGAVSMKEEDGELKIVMRGNAFFAPGQNI 134

Query: 141 -EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            E        +  +     K            +           L+ +R  ++ + 
Sbjct: 135 FEDKTRQYLAEVAEVLKTSKHAIHIIGHTDASDAAKVGAQNSFELSARRAAKVAEF 190


>gi|170693710|ref|ZP_02884868.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170141492|gb|EDT09662.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 215

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   ++  P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKAVLKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|258624664|ref|ZP_05719599.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
 gi|258583056|gb|EEW07870.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
          Length = 366

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268
               V  E       +   D+     F         E  + L+ +   +        + +
Sbjct: 215 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNTVLV 274

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G+TD       +  N  +S  RA    + L + G++E+++ ++          ++D   
Sbjct: 275 DGYTDNV---GPSVANLTISRQRAELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAA 330

Query: 329 --SANRRIDILVEDRQ 342
             + NRR+ + +    
Sbjct: 331 GQAKNRRVTLRLVRDN 346


>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 376

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 18/119 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F   S+         L +I   L        + I G+TD       ++ N +LS  RA 
Sbjct: 261 LFAFDSTGLRMP-QPRLDEIAAALGSHGEVNEVVITGYTDRI---GSSQYNQKLSERRAL 316

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRID---ILVEDR 341
           +    L   G+  +R+    G       +A +D    A       NRR++   I +E R
Sbjct: 317 AVKTYLTGKGIDANRLKA-QGKGEADPVVACTDKKLPALIKCLEPNRRVEVENITIERR 374


>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 357

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344

Query: 338 VED 340
           V+ 
Sbjct: 345 VKG 347


>gi|312882598|ref|ZP_07742338.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369758|gb|EFP97270.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 176

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    E   VL      L+ +    +++ GH D          N  L   RA + 
Sbjct: 76  FAFDNSTIASEYEKVLAAHAAYLSQNPSVKVTVEGHADER---GTPEYNIALGERRAKAV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +        + NRR  ++
Sbjct: 133 AKYLQALGVQADQISIVS-YGEEKPLLLGQTAEAYAKNRRAVLV 175


>gi|225848487|ref|YP_002728650.1| OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643425|gb|ACN98475.1| putative OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 281

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     E +  L  +   L    +  + I G+TD          N +L+L RA + 
Sbjct: 176 FYLNSVSIKKEYLPYLNVVARYLKTHPDVKVKIVGYTDNI---GSKAYNDKLALKRAETV 232

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L+K G+  +RI  I G    +  +++        NRR +  V
Sbjct: 233 KKYLVKMGIDPNRIL-IEGVGKDKYIVSNKNEIDRFTNRRAEFYV 276


>gi|46015011|pdb|1OAP|A Chain A, Mad Structure Of The Periplasmique Domain Of The
           Escherichia Coli Pal Protein
          Length = 109

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           Q N   FD        +   +L      L  +     ++ GH D          N  L  
Sbjct: 3   QNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGE 59

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 60  RRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 108


>gi|209519335|ref|ZP_03268134.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209500219|gb|EEA00276.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 215

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L ++   +      + +  GHTD          N RLSL 
Sbjct: 97  QADALFDFDKAILKPAGKDRLSELASKIQGINLEVVVATGHTDRI---GSDAYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  GV  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAFLVSKGVEANRIYT-EGKGRRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|162146629|ref|YP_001601088.1| outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209543379|ref|YP_002275608.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161785204|emb|CAP54750.1| Outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531056|gb|ACI50993.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 158

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+ + +    +    L +    LA   +  I + G+ D          N  L   R
Sbjct: 53  DRVFFELNKNNLSSDAQATLDRQAAWLAKYPQVTIQVAGNCDDR---GTEEYNIALGERR 109

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           A +A   L+  GV+  RI+ IS +   R     D     + NR
Sbjct: 110 ANAARDYLVAKGVAASRITTIS-YGKDRPTATGDDEQSWAQNR 151


>gi|157962391|ref|YP_001502425.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157847391|gb|ABV87890.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 289

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   +         + ++ E LA   + +++ I  +TD+         N ++S  RA S
Sbjct: 184 YESGGTELTRYAKSQIARVQEYLAYDQNVDLVLIDAYTDSY---GGRSINQKVSEQRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
                + SG+ ++RI  + G    R   ++      S NRR+ I +   
Sbjct: 241 VKDFFVASGIGQNRIHTM-GHGEKRHVASNQTIDERSRNRRVVIRISKP 288


>gi|309973370|gb|ADO96571.1| Outer membrane protein P5 [Haemophilus influenzae R2846]
          Length = 359

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  +   ++      +++ G+TD          N +LS +RA S 
Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
               +  GV+ D IS  +G+           D +            +RR++I V   +
Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359


>gi|259090535|gb|ACV91890.1| OprL [Pseudomonas fluorescens]
 gi|259090539|gb|ACV91892.1| OprL [Pseudomonas fluorescens]
 gi|259090545|gb|ACV91895.1| OprL [Pseudomonas fluorescens]
 gi|259090553|gb|ACV91899.1| OprL [Pseudomonas fluorescens]
 gi|259090561|gb|ACV91903.1| OprL [Pseudomonas fluorescens]
 gi|259090573|gb|ACV91909.1| OprL [Pseudomonas fluorescens]
 gi|259090575|gb|ACV91910.1| OprL [Pseudomonas fluorescens]
 gi|259090581|gb|ACV91913.1| OprL [Pseudomonas fluorescens]
          Length = 157

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKGNGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGN 151


>gi|323436025|ref|ZP_01049805.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
 gi|321496340|gb|EAQ39777.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
          Length = 306

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 30/280 (10%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            +  +  F     +    +   F    P      N I         + + +  +  T   
Sbjct: 53  LRGTDGNFAFTSNDNFNFNSSDFAIITPVAGDVNNGIAKLKGYFDAEGNDNKMVNITGYY 112

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    L  ++ +      + +     +        E+ +   + Y  P     
Sbjct: 113 DSDEVNNSAYANLGLARATAVKNYFVDQGISSSRINTYGELREELVPDGDIYRGPVSYNL 172

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A + + + Q+    ++  +                    ++I              S
Sbjct: 173 YAQAAEDEAKAQEDLANMAEAIKADP----------------LVIYFDYSEA-------S 209

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                +    L  I   L       I++ GHTD+         N RL L+RA    Q L 
Sbjct: 210 VNLNAQQRKKLGNITRYLDKVEGSSITVEGHTDSQ---GSMATNDRLGLERAEFGKQYLQ 266

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            +G++  +I  ++          +D       NRR  I +
Sbjct: 267 NNGIAGAKIKTVT-KGERNPIATNDTEEGRTQNRRAVITI 305


>gi|239994128|ref|ZP_04714652.1| OmpA/MotB [Alteromonas macleodii ATCC 27126]
          Length = 398

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD  S++        + +  E +       ++  GHT A         N  LS  RA
Sbjct: 284 RVLFDNESAVVKMPKDPEISEFAEFMKQYPSTTAVIEGHTSA---PGSEAYNMDLSKRRA 340

Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
            +  +V++   G+   R+  I G+   +L     +   +  NRRI + V+D
Sbjct: 341 ANFKEVMVDMYGIEGSRLETI-GYGETQLLDNGKNAEAHRVNRRISVTVKD 390


>gi|149191044|ref|ZP_01869304.1| putative outer membrane protein [Vibrio shilonii AK1]
 gi|148835072|gb|EDL52049.1| putative outer membrane protein [Vibrio shilonii AK1]
          Length = 207

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKR--LQDLAKKISSTLSGLVADNIVKGVLFE 218
                  N + +Y   PL+ +K   +       +      I++     + ++  +  +  
Sbjct: 19  ASATTPENDKYDYIATPLADQKADLIDDDGDGVINARDLCIATPEGAALDNDGCEQYVDV 78

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
           +    + I         +FD +S+   P     + ++ + L    +    I+G+      
Sbjct: 79  SNTMALRI---------LFDNASTYIKPVFQTQISQMADFLKEYPDTTIEIQGYAS---V 126

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRID 335
                 N  LS +RA    + ++ +G++ +R+  I G+   +      ++  ++ NR++ 
Sbjct: 127 VGNPEKNLVLSKNRAEVVREAIINNGIAPERL-TIVGYGDTQPEELGDTEFAHAMNRKVV 185

Query: 336 ILVEDRQG 343
             V   +G
Sbjct: 186 ASVVGYKG 193


>gi|15645435|ref|NP_207609.1| flagellar motor protein MotB [Helicobacter pylori 26695]
 gi|3024164|sp|P56427|MOTB_HELPY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|2313948|gb|AAD07865.1| flagellar motor rotation protein (motB) [Helicobacter pylori 26695]
          Length = 257

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|34581206|ref|ZP_00142686.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
           246]
 gi|28262591|gb|EAA26095.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
           246]
          Length = 155

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E  ++I GH D          N  L   RA +A
Sbjct: 53  FAFDSSALSPKAKEELERQACWLSKHPEVKVTIEGHCDER---GTKEYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153


>gi|260596996|ref|YP_003209567.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
 gi|260216173|emb|CBA29013.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
          Length = 465

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269
           + +       R   +     +    +F   S+   P +   LQ +  ++         I 
Sbjct: 324 LQQEAQATIDRYRNVPFFSSKAPVSLFSSGSARLRPHSPTALQPLLMLVNQHPGRRFLII 383

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GH+D +        N +LS+ RA +  + L+K+        ++ G        ++D    
Sbjct: 384 GHSDNT---GSPEVNRQLSVSRAIAVREWLVKTTRRSATQFEVYGSGASDPVASNDSEMG 440

Query: 330 A--NRRID 335
              NRR++
Sbjct: 441 RELNRRVE 448


>gi|198282622|ref|YP_002218943.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667641|ref|YP_002424813.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247143|gb|ACH82736.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519854|gb|ACK80440.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 217

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S   L   I VL ++        E V+ + G+            N +LS  RA S 
Sbjct: 108 FKFDSYKLLDHDIRVLDEVASFAKKHPEAVLDVNGYCSKV---GTYAYNLKLSKLRAQSV 164

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            Q L   GV+ DR+  + G ++      +        N+R++I
Sbjct: 165 AQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206


>gi|150024426|ref|YP_001295252.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|150025241|ref|YP_001296067.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149770967|emb|CAL42434.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771782|emb|CAL43256.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 644

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD + S+   +  V L KI  VL  +  +   IR HTD+      A  N  LS 
Sbjct: 530 SIKMIYFDLNKSVIRKDASVELAKILTVLNLNPTIKIDIRSHTDSRQ---TAAYNMSLSD 586

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMN--SANRRIDILV 338
            RA S  + L++ G+S DR+    G+   +L        +        NRR + ++
Sbjct: 587 RRAKSTIEWLVQKGISPDRL-TGRGYGESQLVNECSDGVNCTGEQHQLNRRSEFII 641


>gi|295677286|ref|YP_003605810.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295437129|gb|ADG16299.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 215

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L ++   +      + +  GHTD          N RLSL 
Sbjct: 97  QADALFDFDKAILKPAGKERLSELASKIQGINLEVVVATGHTDRI---GSDAYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  GV  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAFLVSKGVEANRIYT-EGKGRRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|242310593|ref|ZP_04809748.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
 gi|239522991|gb|EEQ62857.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
          Length = 251

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 8/163 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           ++   +       +  KKI S +     +  V          G    I+      +FDK+
Sbjct: 51  QQQADITTDPETTNEVKKIESEIMDFKENTRVSLGPSTIIDEGSRGFILRFNGKLLFDKN 110

Query: 241 SSIPL-PETIVVLQKIGEVLAHST--EVISIRGHTDASPF--RNIARDNWRLSLDRAYSA 295
            +     E  + L+++  +L        + + G+TD S        +DN  LS  RA   
Sbjct: 111 ETTLKNAEEKLFLKRMALILQKMPANMHLDVIGYTDDSQIIPTQKYQDNLGLSAMRALGV 170

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            +VL+++GV+  +I+ + G       + +      + NRR++ 
Sbjct: 171 ARVLIENGVNPQKITSL-GNGATNFVLPNTTEENKAQNRRVEF 212


>gi|220923055|ref|YP_002498357.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219947662|gb|ACL58054.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 192

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +SS      +  +  +G  LA        I I GHTD    +   R N RLS  RA 
Sbjct: 81  FDFNSSRIGDAALPQVSTLGSSLARPELRDSTILIVGHTD---GKGSDRVNQRLSERRAE 137

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           +  Q ++++  V    +  + G+   RLK++++P  +ANRR+
Sbjct: 138 AVKQYIVRNYDVPGANLISV-GYGKSRLKVSNNPYAAANRRV 178


>gi|83949565|ref|ZP_00958298.1| OmpA domain protein [Roseovarius nubinhibens ISM]
 gi|83837464|gb|EAP76760.1| OmpA domain protein [Roseovarius nubinhibens ISM]
          Length = 333

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P     L  +   L       I++ GHTDA+        N  +S  RA + 
Sbjct: 228 FATGSATLGPGPFASLTALAAYLKGDGARRIALVGHTDAT---GGRDINISISRQRARAV 284

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L++  GV   ++    G  +     ++        NRR++ ++   Q
Sbjct: 285 LDRLVEGHGVPRAQLEA-DGVGYLAPIASNLTEAGRQANRRVEAVLLTTQ 333


>gi|298370128|ref|ZP_06981444.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281588|gb|EFI23077.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 298

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 22/164 (13%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF---DKSSSIPLPETIVVLQ 253
           ++  + + G+   N     +    +   ++   + + + +F          L +    + 
Sbjct: 139 EQAEAEMKGVKRQNHTLSRVVSKDKCAQVLKKYNLQASALFKFDRSGYQDMLEQGKREVS 198

Query: 254 KIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            I + +  +      +++ GHTD          N  LS+ RA +  Q L  SG+  + I 
Sbjct: 199 TISQDIKQNPAAVTSVNVVGHTDPE---GKPEYNDALSVKRAQTVKQALSSSGLDGN-II 254

Query: 311 KISGFAHHRLKIASD----PMNSA--------NRRIDILVEDRQ 342
              G     L + +     P N+         NRR++I++   +
Sbjct: 255 STQGKGERELVVTNCRKRFPKNAKAREKCDQPNRRVEIILHGEK 298


>gi|218675305|ref|ZP_03524974.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
          Length = 206

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 11/190 (5%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E       + +   +          P +       +  +      +  ++T     A
Sbjct: 22  PAPEATPVPIATPETTPAKIGSTQASSNPDASANPAKEETVEASPTSGQGPAATSPTTAA 81

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
             I     +        ++   Q     F   SS   PE   +LQK+  V+       I 
Sbjct: 82  ATITTPQTYWKLPDDDQVNYRVQ-----FAFDSSAIAPEQKPMLQKLCSVVKEMDIKLIR 136

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326
           I GHTDA      AR N  LS  RA    +   +   +  +R+  + G           P
Sbjct: 137 IVGHTDA---SGGARYNQNLSTLRAREVARFFTEDCHIPRERLEAV-GVGEQFPLDPQTP 192

Query: 327 MNSANRRIDI 336
               NRR++ 
Sbjct: 193 KADENRRVEF 202


>gi|86137994|ref|ZP_01056570.1| OmpA family protein [Roseobacter sp. MED193]
 gi|85825586|gb|EAQ45785.1| OmpA family protein [Roseobacter sp. MED193]
          Length = 213

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + +    E   VL +    +    E    + GHTDA         N +L L RA SA
Sbjct: 70  FAFNDARLDGEARAVLDRQAAWIKQFPEVRFRVYGHTDAV---GGNSYNKQLGLRRARSA 126

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  G+   R+  +      +  I +      NRR
Sbjct: 127 VNHLVSRGIDRRRLEAMVSKGESQPLILTQEPERRNRR 164


>gi|113968724|ref|YP_732517.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113883408|gb|ABI37460.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 202

 Score = 76.2 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    +++I   L        +I GHT  +        N  LS 
Sbjct: 74  KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   VL     +   R++ I G+   R  +     ++   NRR+
Sbjct: 131 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 177


>gi|301026373|ref|ZP_07189819.1| OmpA family protein [Escherichia coli MS 69-1]
 gi|300395559|gb|EFJ79097.1| OmpA family protein [Escherichia coli MS 69-1]
          Length = 160

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|213961779|ref|ZP_03390045.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
 gi|213955568|gb|EEB66884.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
          Length = 330

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 14/155 (9%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + +++ IS T +     ++   V        +        +   FD   +    +  V L
Sbjct: 182 ELMSQPISLTTAQQKIYSLFPNVFEVNKGDNLANIF--NIDNIYFDFGHTNIRKDASVQL 239

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            KI   L  +    I ++ HTD+       + N  L+  +A S  Q L+K G++  RI  
Sbjct: 240 AKIVAFLEDNPTLKIIVKVHTDSR---GNDKYNRELTETQAKSIEQWLIKRGIASHRIIA 296

Query: 312 ISGFAHHRLKIA-------SDPMNSANRRIDILVE 339
             G+   +L          ++  + AN+R++ +V+
Sbjct: 297 -KGYGATQLVNGCEKGVPCTEEEHQANKRVEFIVD 330


>gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
 gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
          Length = 359

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  +   ++      +++ G+TD          N +LS +RA S 
Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
               +  GV+ D IS  +G+           D +            +RR++I V   +
Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359


>gi|167623616|ref|YP_001673910.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353638|gb|ABZ76251.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 289

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           ++   +         + K+ E LA   + +++ I  +TD+         N R+S  RA S
Sbjct: 184 YESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSY---GGRSANQRVSEQRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             ++ + SG+ ++RI  + G    R   ++      S NRR+ I +   
Sbjct: 241 VKELFVASGIGQNRIHTL-GHGERRHVASNQTIDERSRNRRVVIRISKP 288


>gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
 gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
          Length = 642

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 FD   S    +    +  +  V+  + ++   I+ HTD+   ++    N  LS 
Sbjct: 528 SIQNIYFDLDKSEINDKAEKQIAILLYVMQKNPDIKLEIKSHTDSRASKS---YNLELSN 584

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            RA      L+K+G+   RIS   G+   RL          S+  +  NRR + +V
Sbjct: 585 KRALETSNWLVKNGIDSSRISS-KGYGESRLVNHCSDGVKCSEEEHQMNRRSEFIV 639


>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 357

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344

Query: 338 VED 340
           V+ 
Sbjct: 345 VKG 347


>gi|16272329|ref|NP_438542.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae Rd KW20]
 gi|68248984|ref|YP_248096.1| outer membrane protein P6 [Haemophilus influenzae 86-028NP]
 gi|145630448|ref|ZP_01786229.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
 gi|145632628|ref|ZP_01788362.1| scaffold protein [Haemophilus influenzae 3655]
 gi|145634623|ref|ZP_01790332.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
 gi|145638710|ref|ZP_01794319.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
 gi|148825337|ref|YP_001290090.1| outer membrane protein P6 [Haemophilus influenzae PittEE]
 gi|229844456|ref|ZP_04464596.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
 gi|229846468|ref|ZP_04466576.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
 gi|260580556|ref|ZP_05848384.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
 gi|260582355|ref|ZP_05850148.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
 gi|319775690|ref|YP_004138178.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae F3047]
 gi|319898097|ref|YP_004136294.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae F3031]
 gi|329122256|ref|ZP_08250844.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
           11116]
 gi|129596|sp|P10324|PAL_HAEIN RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
           Full=15 kDa peptidoglycan-associated lipoprotein;
           Short=PC protein; Flags: Precursor
 gi|148860|gb|AAA24940.1| PC protein precursor [Haemophilus influenzae]
 gi|148961|gb|AAA24994.1| outer membrane protein P6 precursor [Haemophilus influenzae]
 gi|1573351|gb|AAC22039.1| peptidoglycan-associated outer membrane lipoprotein (pal)
           [Haemophilus influenzae Rd KW20]
 gi|68057183|gb|AAX87436.1| outer membrane protein P6 precursor [Haemophilus influenzae
           86-028NP]
 gi|144984183|gb|EDJ91620.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
 gi|144986823|gb|EDJ93375.1| scaffold protein [Haemophilus influenzae 3655]
 gi|145268168|gb|EDK08163.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
 gi|145272305|gb|EDK12213.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
 gi|148715497|gb|ABQ97707.1| outer membrane protein P6 precursor [Haemophilus influenzae PittEE]
 gi|229810561|gb|EEP46279.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
 gi|229812705|gb|EEP48394.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
 gi|260092898|gb|EEW76833.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
 gi|260094723|gb|EEW78618.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
 gi|301169083|emb|CBW28680.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae 10810]
 gi|309750200|gb|ADO80184.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae R2866]
 gi|309972460|gb|ADO95661.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae R2846]
 gi|317433603|emb|CBY81987.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae F3031]
 gi|317450281|emb|CBY86497.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           influenzae F3047]
 gi|327473817|gb|EGF19234.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
           11116]
          Length = 153

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 18  AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 78  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 134 AVLGHDEAAYSKNRR 148


>gi|170727075|ref|YP_001761101.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
 gi|169812422|gb|ACA87006.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
          Length = 178

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 7/127 (5%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272
            VL    +  +    + + +   FD   S    +   VLQ  GE L       + I GH 
Sbjct: 55  PVLTPQEQQRLKYQELRKEHIIYFDFDRSSVSAQFAEVLQAHGEYLIEHPNVRVMIEGHA 114

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA 330
           D          N  L   RA +  + L   GV   ++S +S +   +      +D   + 
Sbjct: 115 DER---GTPEYNIALGERRAKAVAKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDGFAV 170

Query: 331 NRRIDIL 337
           NRR  ++
Sbjct: 171 NRRAVLV 177


>gi|218709831|ref|YP_002417452.1| putative outer membrane protein [Vibrio splendidus LGP32]
 gi|218322850|emb|CAV19027.1| putative outer membrane protein [Vibrio splendidus LGP32]
          Length = 211

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 10/163 (6%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRN-T 234
             +E  +     +++ DL       +           +    +    G  I   + R   
Sbjct: 30  QQREAYIETPEAEQIADLQDDDKDGVVNARDTCPGTPETSQVDNDGCGETIRAEEVRQLK 89

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   S    P     +  + E L +     I I+G+            N  LS  RA 
Sbjct: 90  ILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYASKV---GSNEYNLDLSKKRAN 146

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334
           +    L+ +G+  +R+ +I G+   RL+   D    ++ NR++
Sbjct: 147 NVQDELLSNGIEPERV-RIVGYGEERLENDGDDPTSHALNRKV 188


>gi|218887447|ref|YP_002436768.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758401|gb|ACL09300.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 170

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
                FD        E+  VL++  +VL     +   + GH D          N  L   
Sbjct: 63  DAKVYFDFDKFDLKAESKEVLKQKADVLKKFPSIRVLVEGHCDER---GTQEYNLALGER 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
           RA +AY+ L+ SGV+  ++  IS +   R  +   ++   S NRR +  +
Sbjct: 120 RARAAYEYLVMSGVNAGQLEMIS-YGEERPAVEGHNEAAWSKNRRGEFKI 168


>gi|149191161|ref|ZP_01869419.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
 gi|148834999|gb|EDL51978.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
          Length = 305

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F   +          +  I  ++    +++ I   G+TD       +  N ++S  R   
Sbjct: 201 FQSGAVALTELQKRTIGDISSLVKRDPKIVKILIDGYTDN---SGDSVANLQISKQRGSD 257

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             Q  +++GVS  ++ +I G      K  +        NRR++I +  +
Sbjct: 258 VAQWFVENGVS-KKMIEIRGHGDRYPKYDNTTEEGRDKNRRVEIRLVRK 305


>gi|114797840|ref|YP_758889.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114738014|gb|ABI76139.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 180

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               FD        +   +L++    L     V   + G+ D          N  L   R
Sbjct: 70  ERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADER---GTREYNLALGERR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
           A +A   L+  GVS  R+  +S +   R     ++D   + NR
Sbjct: 127 ASAAKDYLVSLGVSASRVDTVS-YGKERPVAGGSNDESWAMNR 168


>gi|87198413|ref|YP_495670.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
 gi|87134094|gb|ABD24836.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
          Length = 174

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S          L +    LA      ++I GH D          N  L   R
Sbjct: 68  DRVFFDFDSYGLDDTDRATLTRQASWLAQYPNVNVTIEGHADER---GTRDYNLALGERR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR-IDILVE 339
           A +A   L   GV+  R+  +  +   R     + +   + NRR + +++ 
Sbjct: 125 ANAAKNFLASLGVATTRM-SVVSYGKERPEALGSDEQSWAQNRRAVTMVIR 174


>gi|86146494|ref|ZP_01064817.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
 gi|218709111|ref|YP_002416732.1| peptidoglycan-associated lipoprotein [Vibrio splendidus LGP32]
 gi|85835757|gb|EAQ53892.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
 gi|218322130|emb|CAV18244.1| Peptidoglycan-associated lipoprotein precursor [Vibrio splendidus
           LGP32]
          Length = 180

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L  +    +++ GH D          N  L   RA + 
Sbjct: 80  FAFDNSTIAGDYEEMLAAHAAYLVKNVDMNVTVEGHADER---GTPEYNIALGERRAQAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179


>gi|320327051|gb|EFW83065.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330876989|gb|EGH11138.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 381

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +    +    V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+     K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDKAQAKPDAVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYDPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|213864488|ref|ZP_03386743.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 102

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           GHTD  P+ N      NW LS DRA ++ + L+  G+   ++ ++ G A         P 
Sbjct: 1   GHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPD 60

Query: 328 NSANRRIDILVEDRQ 342
           ++ NRRI +LV ++Q
Sbjct: 61  DAINRRISLLVLNKQ 75


>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 352

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 21/208 (10%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           D++ G     +   E + N++    L       +      K   +L   + +        
Sbjct: 143 DNDNGAAFVGALGAEYAFNRDWAARLEYQYTTPLGDKALDKTGAELDNGLLAVGVVYRFG 202

Query: 210 NIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLAH---S 262
            +   V            ++D++    +  +FD + +   P     L  +   +      
Sbjct: 203 QVAPVVAAPVPAPAPEPVVVDKQFTLSSDVLFDFNKATLKPAAGQALDNLYSQIEQARPK 262

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             V ++ G+TD          N +LS  RA +    L+  G+   +++ + G        
Sbjct: 263 DGVATVIGYTDRI---GSDAYNQKLSEQRARTVADYLVGKGLPAGKVN-VEGRGKGNPVT 318

Query: 323 ASD-PMNSA---------NRRIDILVED 340
                  S          +RR+++ VE 
Sbjct: 319 GDSCTSKSKKELIVCLAPDRRVEVKVEG 346


>gi|257091690|ref|YP_003165331.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044214|gb|ACV33402.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 198

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + S      +   L  I   +        +  GHTD      +  DN RL+L RA S 
Sbjct: 97  FLEGSDELTAASKTELVAILAEIKARPVPDIVIVGHTDRV---GMVADNDRLALRRADSF 153

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
            + L++ G++++ I    G       +    +     NRR++ILV 
Sbjct: 154 RKKLLQQGIADEAIQTA-GRGEREPLVNTPDETPEPRNRRVEILVR 198


>gi|94311606|ref|YP_584816.1| OmpA/MotB [Cupriavidus metallidurans CH34]
 gi|93355458|gb|ABF09547.1| peptidoglycan-associated outer membrane lipoprotein [Cupriavidus
           metallidurans CH34]
          Length = 169

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ   + L  +      I+G+TD       +  N  L   
Sbjct: 64  KRSVYFDFDSYSVKQDYQGMLQAHSQYLGSNKSRKILIQGNTDER---GTSEYNLALGQK 120

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + K     D   + NRR DI+
Sbjct: 121 RAEAVRRSLAAMGVPDSQMEAVS-LGKEKPKATGHDDASWAENRRADIV 168


>gi|331010144|gb|EGH90200.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 381

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +         V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+ +   K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|259090543|gb|ACV91894.1| OprL [Pseudomonas fluorescens]
 gi|259090577|gb|ACV91911.1| OprL [Pseudomonas fluorescens]
 gi|259090579|gb|ACV91912.1| OprL [Pseudomonas fluorescens]
          Length = 156

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150


>gi|284051859|ref|ZP_06382069.1| OmpA/MotB [Arthrospira platensis str. Paraca]
          Length = 285

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 78/241 (32%), Gaps = 9/241 (3%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T + + L      +  +YQ              +           +  +   +    +
Sbjct: 50  PNTSSEMPLTEQLLRRSPEYQPSFPPPETPLTPTPTPPPTGLTPEVQQTLQPQLQQLQQD 109

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +        L         A   ++RLQ + +++ +  S   A+NI             
Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQL-TAPSSPEAENIPPPTPRTARSRSG 168

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I+   +  +F+  SS   P   V+L  +   L +    V+ + GHTD        + 
Sbjct: 169 NGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SGSRQQ 225

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKIS-GFAHHRLKIASDP--MNSANRRIDILVED 340
           N  LS  +A +  Q L  + V       ++ G+   R  + +        NRRI++ +  
Sbjct: 226 NLVLSSAQAEAIVQYL-SNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284

Query: 341 R 341
            
Sbjct: 285 P 285


>gi|260869286|ref|YP_003235688.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
           11128]
 gi|257765642|dbj|BAI37137.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
           11128]
          Length = 160

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|163786724|ref|ZP_02181172.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
           ALC-1]
 gi|159878584|gb|EDP72640.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
           ALC-1]
          Length = 308

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+   +      E    +  I   +      + + GHTD +     A  N  L  DRA  
Sbjct: 206 FNTGQAQINLTAEQRQKIADISRCVDKLGVKVQVVGHTDNT---GDADTNMTLGQDRADF 262

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           A   L+++G+  D +   S          +      + NRR  I +
Sbjct: 263 AKGYLVRNGILSDNVEATS-KGQTEPIADNATDEGKAKNRRTVITI 307



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 30/91 (32%), Gaps = 10/91 (10%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNI 280
           I I D  N   F  S+   L      +      L         + I I G+  +    N 
Sbjct: 69  IKINDNFN---FKTSNFSILEPISTGVTSEVAKLKDYLLANPLKDIDITGYYRSDETNNS 125

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           A  N  L L RA +    L+  GV   +I  
Sbjct: 126 AYPN--LGLARANAVKNYLISQGVPSRQIDT 154


>gi|86131343|ref|ZP_01049941.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85817788|gb|EAQ38956.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 653

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 19/135 (14%)

Query: 222 TGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             + I + D     +      FD       P+  + L+K+  V+       I +R HTD+
Sbjct: 523 PPLKIELGDDLAKTLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDS 582

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDP 326
                    N  LS  R  S  + ++   G+S  R+    G+   +L  A       ++ 
Sbjct: 583 R---APDAYNMSLSQRRNVSTIRYIVDQGGISMSRL-TGRGYGETQLTNACGNGIECTEE 638

Query: 327 MNSANRRIDILVEDR 341
            +  NRR + ++  +
Sbjct: 639 EHQLNRRSEFIIVAK 653


>gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
 gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
          Length = 350

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 222 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 279 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|330465991|ref|YP_004403734.1| OmpA/MotB domain-containing protein [Verrucosispora maris
           AB-18-032]
 gi|328808962|gb|AEB43134.1| OmpA/MotB domain protein [Verrucosispora maris AB-18-032]
          Length = 407

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 16/122 (13%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +F   S    P     L +I E         + + GHTD+      A  N  LS  
Sbjct: 292 PSAALFATDSDEIGPAGRNRLAEIAEENKLPKATHLEVVGHTDSRD---DADYNQDLSER 348

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---------SDPMNSANRRIDILVEDR 341
           RA +  ++L + GV    +SK  G                   D     NRR++I++  +
Sbjct: 349 RAAAVGRILRELGVP---VSKTRGRGEEVRLCLAERLPGGGWDDACLQRNRRVEIVISKQ 405

Query: 342 QG 343
            G
Sbjct: 406 SG 407


>gi|224826141|ref|ZP_03699244.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
 gi|224601778|gb|EEG07958.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
          Length = 178

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            + +  FD  SS         +    E L        + +G+TDA         N  L  
Sbjct: 69  SKRSVYFDFDSSAVKQSEQQTVANHAEYLKSHPTRKVVIQGNTDAR---GSREYNLGLGQ 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA S    +   GV E+++  +S F   + K   +     + NRR DI
Sbjct: 126 RRAESVKNAMQVIGVKENQLEAVS-FGKEKPKATGNTEADYAQNRRADI 173


>gi|149185390|ref|ZP_01863706.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
 gi|148830610|gb|EDL49045.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
          Length = 359

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   PE   +L       A+     + + GHTD       A+ N  L+  
Sbjct: 248 PYIVFFNWDESEITPEAATILDNAVSAYANCGMASVMLAGHTDT---SGSAQYNMGLAER 304

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S    L   G+ + RIS    F  ++L++ +        NRR+++ 
Sbjct: 305 RNSSVRDYLSARGIPDGRISS-EAFGENQLRVPTADGVRELQNRRVEVT 352


>gi|161520749|ref|YP_001584176.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|189353068|ref|YP_001948695.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|160344799|gb|ABX17884.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|189337090|dbj|BAG46159.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
          Length = 163

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +LQ     L       + I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GV   ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161


>gi|294011226|ref|YP_003544686.1| OOP-family protein [Sphingobium japonicum UT26S]
 gi|292674556|dbj|BAI96074.1| OOP-family protein [Sphingobium japonicum UT26S]
          Length = 360

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   P+   +L       ++     + + G+ D       A  N  LS  
Sbjct: 249 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADR---SGSASYNVGLSQR 305

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS----ANRRIDIL 337
           RA +    +   G+ +  +     F     ++  +  +      NRR++I 
Sbjct: 306 RADAVKAYISSKGIPDG-VITTQAFGESNPRV--ETADGVRELQNRRVEIT 353


>gi|254477082|ref|ZP_05090468.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214031325|gb|EEB72160.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 331

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  +     +    L  +   L  +TE   +  GHTD          N  +S  RA + 
Sbjct: 227 FETGAVELGAKPYDSLVALSSFLQDNTEFDILLVGHTDTV---GSLDQNIAISERRADAV 283

Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++L  S V   RI  ++G  +     ++        NRR+++++  R
Sbjct: 284 RRRLLEDSTVDRARI-AVAGAGYMAPLTSNQTPAGREANRRVEVVLIPR 331


>gi|163750646|ref|ZP_02157883.1| OmpA family protein [Shewanella benthica KT99]
 gi|161329641|gb|EDQ00632.1| OmpA family protein [Shewanella benthica KT99]
          Length = 388

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  +           V  +        +      +  F  +SS+   E+   +
Sbjct: 233 DSDNDGVTDDMDQCPDTAANHKVDAKGCTIYTETTEQRDLGSIQFANNSSVVKTESFAHI 292

Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           +K+   +    E    I GH         A  N  LS  RA +  ++L++  G+S+DR+ 
Sbjct: 293 EKLATYMNKKPESTVLISGHASDV---GKADYNMALSDKRAKAVAKILVEKYGISQDRVE 349

Query: 311 KISGFAHHRLKIASDPMNS--ANRRID 335
              GF   +  I  +   +  ANRRI+
Sbjct: 350 A-KGFGITQAVIQGNSAEANKANRRIE 375


>gi|109947291|ref|YP_664519.1| flagellar motor protein MotB [Helicobacter acinonychis str. Sheeba]
 gi|109714512|emb|CAJ99520.1| flagellar motor rotation protein MotB [Helicobacter acinonychis
           str. Sheeba]
          Length = 253

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGQEEEQTASESSKPASQNTESK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ITITRKGEGSVLEQIDQG------------SILKLPSNLLFENAVSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV  D++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLMQYGVDPDQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
                     PP+   + +   S        + + KI  T + +  
Sbjct: 62  PEAMQPVVVIPPDSGQEEEQTASESSKPASQNTESKITITRKGEGS 107


>gi|117918835|ref|YP_868027.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117611167|gb|ABK46621.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 202

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    +++I   L        +I GHT  +        N  LS 
Sbjct: 74  KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   VL     +   R++ I G+   R  +     ++   NRR+
Sbjct: 131 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 177


>gi|325287615|ref|YP_004263405.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324323069|gb|ADY30534.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 366

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 13/109 (11%)

Query: 239 KSSSIPLPETIVVLQKI-GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             SS    E   ++      VL  +  V   I  HTD+      +  N  LS  RA S  
Sbjct: 259 TGSSTLTAEAKRIIDSRLMPVLNQNPGVKLEIASHTDSR---GNSVSNQSLSERRAKSVA 315

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
             L+  GV+   +   +G+  ++LK         ++  ++ANRR +  +
Sbjct: 316 DYLISKGVNSSLLVA-NGYGENKLKNRCKDGVSCTEREHAANRRTEFRL 363


>gi|309244379|gb|ADO52194.1| OprL [Pseudomonas cichorii]
 gi|309244381|gb|ADO52195.1| OprL [Pseudomonas cichorii]
          Length = 156

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEALRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150


>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
          Length = 363

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 235 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 291

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 292 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 350

Query: 338 VED 340
           V+ 
Sbjct: 351 VKG 353


>gi|298488773|ref|ZP_07006801.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156691|gb|EFH97783.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 376

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +         V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+ +   K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|242238603|ref|YP_002986784.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
           dadantii Ech703]
 gi|242130660|gb|ACS84962.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech703]
          Length = 168

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   FD       P+   +L      L  +     ++ GH D         
Sbjct: 55  LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            N  L   RA +    L   GVS D+I  +  +   +  +    +   S NRR  ++
Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167


>gi|153812960|ref|ZP_01965628.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
 gi|149830907|gb|EDM85997.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/337 (10%), Positives = 96/337 (28%), Gaps = 65/337 (19%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           +       N    W+  Y+D M  ++  F+++  +                         
Sbjct: 2   RRKKKSENNGFNVWR-SYSDMMAGVLLLFVLIMCVTLFQAQK------------------ 42

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                              + S+ E   K ++  +       KQ    + +    +   Q
Sbjct: 43  -----------------SYNESLQERDEKIALQEEYTQELLDKQNALDKKDETLQNQDAQ 85

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +     L    ++   L      ++S    +      L ++      ++ ++  +    
Sbjct: 86  LKTQDEKLAEQEQQLAALAAKLKEQESTLNAQQSA---LDEKTAQLKDQQAQIDQIIGVK 142

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---- 255
           +  +  L  +     +  +       +++     + MFD   +         L++I    
Sbjct: 143 ADVIEALKNEFSKNNINVDIDAQTGALTL---EASVMFDYDQAELTDAGKQALEQILPIY 199

Query: 256 -----GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK--------- 301
                 +        I I G+TD          N +LS  R+ +  Q L+          
Sbjct: 200 CKVLLQDDYMKYLAEIIIDGYTDTD---GDYSYNLQLSQQRSLAVAQYLLDIQGNFLDTT 256

Query: 302 SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
              + ++   ++G +          +    A+RR+++
Sbjct: 257 QSQNLEKYLTVNGHSMANPVLDANGNVDKDASRRVEV 293


>gi|124005217|ref|ZP_01690059.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123989469|gb|EAY29030.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 687

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + N   F + S+  LPE+   L ++ + +  +  +   + GHT+        +    LS 
Sbjct: 578 RLNNIFFSRGSARLLPESYPELNRLAKAMKENPTMRIRLEGHTE---IFGNKKFLMNLSK 634

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
            R  S  + L + G+++ R+  + GF + R       +   + NRR+++ +  +
Sbjct: 635 QRVKSVQKYLSEKGINDRRVK-LKGFGYKRPLSRKKDEKSRALNRRVEVRILSK 687


>gi|157804141|ref|YP_001492690.1| guanylate kinase [Rickettsia canadensis str. McKiel]
 gi|157785404|gb|ABV73905.1| guanylate kinase [Rickettsia canadensis str. McKiel]
          Length = 155

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS   P+    L++    L    E   ++ GH D          N  L   RA +A
Sbjct: 53  FDFDSSDLSPKAKEELERQACWLLKHPEVKATVEGHCDER---GTREYNLGLGERRAAAA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            + L   G+  +R++ IS +   R  +  +     + NRR
Sbjct: 110 KKFLAHKGIDNNRLNIIS-YGKDRPAMMGNTEEAFAYNRR 148


>gi|53725459|ref|YP_102587.1| ompA family protein [Burkholderia mallei ATCC 23344]
 gi|52428882|gb|AAU49475.1| ompA family protein [Burkholderia mallei ATCC 23344]
          Length = 223

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 16/116 (13%)

Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
             MF    +       +    L ++ + L     + +SI G+TD          N +LS 
Sbjct: 105 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 161

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA-------NRRIDIL 337
            RA +    L+ +GV  D +    G       +  D    +A       NRR++++
Sbjct: 162 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLSPNRRVEVV 216


>gi|30248243|ref|NP_840313.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
 gi|30180128|emb|CAD84130.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 171

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            R +  FD  S     E   ++      L  +T   + ++G+TD          N  L  
Sbjct: 61  SRRSVYFDFDSYTVKSEYRDLVLAHAAYLRDNTNAQVLLQGNTDER---GSREYNLALGQ 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA S   +L+ SG  + ++  +S     + +   + +   + NRR DIL
Sbjct: 118 RRANSVKDILLLSGARDQQVEAVS-LGEEKPRALGSDESSWAENRRTDIL 166


>gi|307730629|ref|YP_003907853.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|323526963|ref|YP_004229116.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|307585164|gb|ADN58562.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
 gi|323383965|gb|ADX56056.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 215

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|257465020|ref|ZP_05629391.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
 gi|257450680|gb|EEV24723.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
          Length = 160

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  F   S     E   +L    ++L  +   +++ GH D          N  L
Sbjct: 54  LQTRYNTVYFAFDSYAVEGEYRQLLDAHAQLLNATKANVTVAGHADER---GTPEYNIAL 110

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L + G     +S +S +   +  +        + NRR
Sbjct: 111 GQRRANAVQNYLAQQG--ATNVSTVS-YGEEKPAVLGHTEADYAKNRR 155


>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
 gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
          Length = 364

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 19/122 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F+ + +   P     L  +   +        V ++ G+TD          N  LS 
Sbjct: 242 SDVLFEFNKATLKPAANQALDALFSQIVAANPKDGVATVIGYTDRI---GSDNYNLALSE 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILV 338
            RA S    L+  G+  D++ ++ G              S            +RR++I +
Sbjct: 299 KRAQSVASYLVSKGLYADKV-RVEGRGKANPV-TGSSCASRSKQELIACLAPDRRVEIHL 356

Query: 339 ED 340
           E 
Sbjct: 357 EG 358


>gi|257126466|ref|YP_003164580.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
 gi|257050405|gb|ACV39589.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
          Length = 149

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F  +  I     I  L++I  +L    E  ++   G+TD++      + N +LSL RA +
Sbjct: 37  FKVNGRIITEYQIFDLKEIVNILNKFGESGTVDFVGYTDST---GTKKYNQKLSLIRARN 93

Query: 295 AYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             ++  + G+     I KISG         +D       NRR++IL
Sbjct: 94  VARLFREFGLKDAISIGKISGKGEEDPVDLNDTDQGKYSNRRVEIL 139


>gi|288802401|ref|ZP_06407840.1| OmpA family protein [Prevotella melaninogenica D18]
 gi|288334929|gb|EFC73365.1| OmpA family protein [Prevotella melaninogenica D18]
          Length = 672

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I++    +   +D   +   PE+   L  +  +L  +    I +  HTD   +   A  N
Sbjct: 497 INVPILIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTD---YLGSADYN 553

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASDP----- 326
            RLS  RA +    L   G+  DR++ + G+   R                 +D      
Sbjct: 554 KRLSQRRADAVVAYLTAHGIVRDRLTPV-GYGKERPKKIRKKVTEKYPWLKENDVLTEDF 612

Query: 327 -----------MNSANRRIDILVED 340
                       N  NRR +  V  
Sbjct: 613 IKKLDKEKQEIANQLNRRTEFTVLR 637


>gi|224371628|ref|YP_002605792.1| putative outer membrane protein [Desulfobacterium autotrophicum
           HRM2]
 gi|223694345|gb|ACN17628.1| putative outer membrane protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 350

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 5/140 (3%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +    L+   +           G+++         +FD             L ++   L
Sbjct: 210 KALEESLIQAGLENHFEVAVEGPGLVLE---SVFPILFDPCKFALTDAHKRFLGRLAGFL 266

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              + ++ + G TD    R     N  LS  RA +  + L + G+    + KI+G   ++
Sbjct: 267 KPYSVLVEVTGFTDYRKIRGTKMTNIELSAKRAGAVVRELRERGMKSS-VFKITGMGEYK 325

Query: 320 L-KIASDPMNSANRRIDILV 338
                S+     +RR DI +
Sbjct: 326 KCLEKSERCRVLSRRADITI 345


>gi|94970145|ref|YP_592193.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552195|gb|ABF42119.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 242

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 8/210 (3%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
              ++ +        K  +L   T       K+ +        +         +    A 
Sbjct: 22  ATKKYTREQAAPIINKTNELDDLTAKNSRDIKDTDRRAQSGIADAQAKATTADQHAVQAG 81

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           + +   +        +      T   +        ++  F    +    +    L ++G 
Sbjct: 82  QQADAANKNATQVNGQVASLAGTVENLDNYKPVAESSVHFGFDKADLTKKAKDALDQLGG 141

Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315
             + +   I  + G TD++     A  N++LS  RA +  Q L  K  +   +I  I G 
Sbjct: 142 QFSSTKHFIIEVEGSTDST---GDADYNYQLSKRRADAVIQYLADKYQIPAHKIYLI-GL 197

Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343
              +    +      + NRR+D+ +    G
Sbjct: 198 GKDKPVEKNATSEGRAKNRRVDVRLMTNTG 227


>gi|240948556|ref|ZP_04752929.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
 gi|240297064|gb|EER47635.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
          Length = 156

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  F   S     E   +L    ++L  +   +++ GH D          N  L
Sbjct: 50  LQTRYNTVYFAFDSYAIEGEYRQLLDAHAQLLNATKANVTVAGHADER---GTPEYNIAL 106

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L + G     +S +S +   +  +        + NRR
Sbjct: 107 GQRRANAVQNYLAQQG--ATNVSTVS-YGEEKPAVLGHTEADYAKNRR 151


>gi|15602831|ref|NP_245903.1| hypothetical protein PM0966 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18202558|sp|Q51886|PAL_PASMU RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
           Full=P6-like; AltName: Full=Peptidoglycan-associated
           lipoprotein; Flags: Precursor
 gi|841126|gb|AAA79373.1| outer membrane protein, similar to Haemophilus influenzae outer
           membrane protein P6, Swiss-Prot Accession Number P10324
           [Pasteurella multocida]
 gi|12721291|gb|AAK03050.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 150

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 41  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDER---GTPEYNIA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 98  LGQRRADAVKHYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 145


>gi|320326605|gb|EFW82655.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331074|gb|EFW87046.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 830

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEV--ISIRGHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I I GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|254706491|ref|ZP_05168319.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
          Length = 47

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 7  KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLV 50
          + +   + II+++    D   ++ G WKI YADFMT +MAFFLV
Sbjct: 4  EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLV 47


>gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
 gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
          Length = 350

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 222 KSDVLFAFNKSNLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 279 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|51246716|ref|YP_066600.1| peptidoglycan-associated lipoprotein [precursor] [Desulfotalea
           psychrophila LSv54]
 gi|50877753|emb|CAG37593.1| related to peptidoglycan-associated lipoprotein [Precursor]
           [Desulfotalea psychrophila LSv54]
          Length = 177

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 7/108 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+  SS    +    +Q   + + A+   ++ I G+TD+         N  L   RA
Sbjct: 72  PVYFNFDSSAVGEDQKPRVQVNADFMDANVDYMVRIEGNTDSR---GTDEYNMALGERRA 128

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
            SA Q LM  GV E R++ +S +   RL +     ++   NRR D +V
Sbjct: 129 LSAQQYLMDLGVEEARLTTVS-YGKERLLLNGQSEDAWSQNRRCDFVV 175


>gi|315608144|ref|ZP_07883136.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
 gi|315250113|gb|EFU30110.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
          Length = 238

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 8/148 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K+   +   V++  V+ V        + ++     +  +F  + S     +   L K 
Sbjct: 86  MDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTF---DSGLLFPLNKSTLSASSKTELAKF 142

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL +  +  + I+G+TD +      + N  LS  RA S    L K GV       ++G
Sbjct: 143 ATVLKNDPQLAVDIQGYTDRT---GGDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTG 199

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
           F        +  ++  NRR+++ +   Q
Sbjct: 200 FGSANEI-ENAAVSQVNRRVEVYLYASQ 226


>gi|255067169|ref|ZP_05319024.1| OmpA family protein [Neisseria sicca ATCC 29256]
 gi|255048537|gb|EET44001.1| OmpA family protein [Neisseria sicca ATCC 29256]
          Length = 253

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                G V     + V         +   +      +F     I  PE    L  + + L
Sbjct: 55  DKETQGRVECGDREAVAAVQQAPEYVDETVSLSAKTLFGFDKDILRPEAQENLNSLAQRL 114

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              + + + I GHTD   F      N  LS  RA      L+  GV   ++S  +G    
Sbjct: 115 SNENVQTVRIEGHTD---FMGSEEYNQNLSERRANVVANYLVGRGVPSSKVSA-TGLGES 170

Query: 319 R 319
           +
Sbjct: 171 Q 171


>gi|325275254|ref|ZP_08141211.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324099595|gb|EGB97484.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 323

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 16/215 (7%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
             + S+    +  K ++T +  K     +ST         ++         KI     + 
Sbjct: 35  WPFGSDKVAEQEVKAAVTDNVAKADAKSESTSRWWWPFGGDDQQAKGPVVPKIDQQATQA 94

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L +   K+   +     +   +  +   T         D+ N  +         P ++ 
Sbjct: 95  WLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL---------PMSLG 145

Query: 251 VLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            + ++ + +       + + GH D       A  N +LSL+RA S   +   SG+  DR+
Sbjct: 146 PITRVAKTVEGDPKTAVLVLGHADT---SGAAAANQKLSLERAASVSAIFRLSGLQRDRL 202

Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             + G      + A+D     + NRR+++L+  + 
Sbjct: 203 -TLKGMGSVMPRAANDSPEGRALNRRVEMLLTPQN 236


>gi|319795926|ref|YP_004157566.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315598389|gb|ADU39455.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 207

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 7/176 (3%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           + + +      + + K       K  Q     + ++ + +V       V  E      + 
Sbjct: 36  LPQADGKPSAVVVRAKDGEEVLSKPYQRATAAVGASGAPVVDQADAAKVQAENKPLFDMR 95

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285
               QR T  F+   +   P +  ++ +     LA S   I + GHTD    +     N 
Sbjct: 96  PPPPQRYTVFFEVGGTTLTPASQQIMTEALAAALARSGGDIVVTGHTDT---KGNGESND 152

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           +LS  RA    Q+ ++     +R+  + G     L + +        NRR+ I V 
Sbjct: 153 QLSRRRAQEVVQLFVEQRFPANRVEAV-GRGERDLAVPTADEVDEPRNRRVTIEVR 207


>gi|289627038|ref|ZP_06459992.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647994|ref|ZP_06479337.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867282|gb|EGH01991.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 381

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+         +        +   +  E +       +         V     +      
Sbjct: 14  AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSTAPAPVAKAAAAPAAPAA 73

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                   ++   S+ +   K     D    K    +   +   + +  +      K+  
Sbjct: 74  GAENSAPWYWPFGSKDNAQVKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                    +     +      L A         E     + I+         F+     
Sbjct: 134 PKALPMPDPKVTQAWLDGYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190

Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
            L P T+  + ++ +V+       + I GH D          N ++S +RA S   +   
Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           SG+  +R+S+  G      + A+D     + NRR++IL
Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|259415649|ref|ZP_05739570.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259348879|gb|EEW60641.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 136

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F    S         LQ+        T    + GHTD+         N  LS  RA + 
Sbjct: 35  FFATDGSTVNAAGRKRLQEWFRNAMPGTRSFVVAGHTDSR---ASDEYNMALSQRRADAV 91

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
            Q+    G    RI  +  +     ++ +      + NRR++I    R
Sbjct: 92  AQIGRSVG---ARIKDVRAYGERSPRVPNRGAANLAQNRRVEIYCIRR 136


>gi|67459626|ref|YP_247250.1| peptidoglycan-associated lipoprotein precursor [Rickettsia felis
           URRWXCal2]
 gi|67005159|gb|AAY62085.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia felis
           URRWXCal2]
          Length = 156

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E   ++ GH D          N  L   RA +A
Sbjct: 54  FAFDSSALSPKAKEELERQACWLSKHPEVKATVEGHCDER---GTREYNLGLGERRAAAA 110

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+   R++ IS +   R  +  +     + NRR + ++
Sbjct: 111 KKFLAHKGIDHSRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 154


>gi|183221257|ref|YP_001839253.1| OmpA domain-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911348|ref|YP_001962903.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167776024|gb|ABZ94325.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779679|gb|ABZ97977.1| Putative outer membrane protein, OmpA domain; putative membrane
           protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Paris)']
          Length = 271

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   +    +    + K+ E LA   E  I+I GH + +        N RLS D
Sbjct: 163 DGGIAFEDGKADLKGKGKENVDKLAEALAAYPETKINITGHANRT---GAEDLNLRLSQD 219

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RA +A   ++++GV   RI  + G          DP + +NRR+++ +
Sbjct: 220 RAVTAKDAIIENGVEGKRIGTVQGLGSSTPMKNVDPKDGSNRRVEVEI 267


>gi|94968752|ref|YP_590800.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550802|gb|ABF40726.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 286

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 22/261 (8%)

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
            +     + +          TK      +G   Q+  +  L   +            K  
Sbjct: 38  SDVLSLKTADGNQDVTLTDSTKVQSPKGLGLRKQQMSWASLIPGLKVSVKGALDAGGKFI 97

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
               +    DL  ++ ++  +   E      +   K    + K+ +    ++I       
Sbjct: 98  AEEITFSKDDLQTASMIQAGLTPTEQ----KVDANKQSIGENKENIDTNKQQIDENQQA- 152

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
                            +    + +     F    S         L  +       T  I
Sbjct: 153 ----------VNKRFDDLTDFDVKKEAVVYFVSGKSSLAAADKKALTDLAAEATKLTGYI 202

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             ++G  D++     A  N  LS DRA++    LM+   V    I             ++
Sbjct: 203 IEVKGFADST---GNAAMNQTLSKDRAFAVVNFLMQDCSVPPRHIVSPGAMGISNPVASN 259

Query: 325 DPMNSA--NRRIDILVEDRQG 343
           +       NRR+++ V   +G
Sbjct: 260 ETATGRKENRRVEVKVMVNKG 280


>gi|29467513|dbj|BAC66780.1| OmpA-like outer membrane protein [Acidithiobacillus ferrooxidans]
          Length = 217

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S   L   I VL ++     +  E V+ + G+            N +LS  RA S 
Sbjct: 108 FKFDSYKLLDHDIRVLDEVASFAKNHPEAVLDVNGYCSKV---GTYAYNLKLSKLRAQSV 164

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            Q L   GV+ DR+  + G ++      +        N+R++I
Sbjct: 165 AQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206


>gi|332999380|gb|EGK18965.1| ompA family protein [Shigella flexneri VA-6]
          Length = 160

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   LQ +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQLQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|331674046|ref|ZP_08374808.1| YfiB [Escherichia coli TA280]
 gi|331068785|gb|EGI40178.1| YfiB [Escherichia coli TA280]
          Length = 160

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|284922551|emb|CBG35638.1| outer membrane lipoprotein [Escherichia coli 042]
          Length = 160

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
 gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
          Length = 355

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D       A  N +LS
Sbjct: 227 KSDVLFAFNKATLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQAAPNLKLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
            +RA S  + L+  G+  D+IS   G         +      P  +       +RR++I 
Sbjct: 284 ENRARSVVEYLVAKGIPADKISA-RGMGQADPVTGNTCDNVKPRAALIECLAPDRRVEIE 342

Query: 338 VED 340
           V+ 
Sbjct: 343 VKG 345


>gi|317178824|dbj|BAJ56612.1| flagellar motor protein MotB [Helicobacter pylori F30]
          Length = 255

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD  P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDMPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|148977417|ref|ZP_01814017.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
 gi|145963369|gb|EDK28634.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
          Length = 180

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L  +    ++I GH D          N  L   RA + 
Sbjct: 80  FAFDNSTIAGDYEEMLAAHAAYLVKNVDMKVTIEGHADER---GTPEYNIALGERRAQAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179


>gi|83648072|ref|YP_436507.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
           [Hahella chejuensis KCTC 2396]
 gi|83636115|gb|ABC32082.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic components [Hahella chejuensis KCTC 2396]
          Length = 513

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   +S    E    +  + E L H       IRGHT     R  A  N +LSL
Sbjct: 398 KVRPIIFASGTSELTLEGKREVDLLMENLQHYPNFRVEIRGHT---GVRGDAEANKQLSL 454

Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK--IASDPMNSAN-R--RIDILVEDRQ 342
           DRA + Y+ + +   V  +R  +  GF   +    + ++ + + N R  R++I++   +
Sbjct: 455 DRAEAVYRYIEVTYEVDPNRF-RFVGFGGEKPLPQLPNESLRAYNYRLPRVEIVLVSGE 512


>gi|71906104|ref|YP_283691.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71845725|gb|AAZ45221.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 217

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD + ++  P     L ++          + +  GHTD          N +LS  RA
Sbjct: 101 DALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRI---GSDSYNQKLSEKRA 157

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA----------NRRIDILVEDR 341
            +  + L+  G+  +R+    G    +         N+           +RR+DI V   
Sbjct: 158 AAVKEYLVAKGIEANRVYT-EGKGEKQPVTGDKCKGNAKTKALIDCLQPDRRVDIEVIGT 216

Query: 342 Q 342
           +
Sbjct: 217 K 217


>gi|71906867|ref|YP_284454.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71846488|gb|AAZ45984.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 219

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD + ++  P     L ++          + +  GHTD          N +LS  RA
Sbjct: 103 DALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRI---GSDSYNQKLSEKRA 159

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA----------NRRIDILVEDR 341
            +  + L+  G+  +R+    G    +         N+           +RR+DI V   
Sbjct: 160 AAVKEYLVAKGIEANRVYT-EGKGEKQPVTGDKCKGNAKTKALIDCLQPDRRVDIEVIGT 218

Query: 342 Q 342
           +
Sbjct: 219 K 219


>gi|298208185|ref|YP_003716364.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
           HTCC2559]
 gi|83848106|gb|EAP85976.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
           HTCC2559]
          Length = 366

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 74/290 (25%), Gaps = 15/290 (5%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              + I   +       +          NP    +  +       +      D+      
Sbjct: 78  KKLRIIPTVYGTETVTYVKKQSSSVLSINPATFGNSAETIEIKPAYAQWEMSDVPPAECQ 137

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                              Q+   +      S     + +           E   +    
Sbjct: 138 SNNPEDCRYWCYKGYPAEYQTVAVRTLANDASTSSSPVAEQAGSYTKRVVTEPARVVEEE 197

Query: 180 KEKILAMKRK----KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                A   K    K      + +++    +  + + +     T        +       
Sbjct: 198 VPAEYATITKTVLVKDAGTTEETVAAKYKTVTKEVLKQKGGLTTWAEVDCKLLEYTDLNI 257

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +++  S+         +      +      + I  HTD+      A  N  LS  RA + 
Sbjct: 258 VWNLGSASLTNAAKAEIDAKLLPVMQQGVSVEIASHTDSR---GTASSNQALSERRAQAV 314

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
              L+  G++  +I+  +G+   +L+         ++  ++ NRR    V
Sbjct: 315 TNYLISKGINSSKITS-NGYGESKLRNRCADGVSCTEREHTLNRRTQFRV 363


>gi|312796781|ref|YP_004029703.1| peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
           454]
 gi|312168556|emb|CBW75559.1| Peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
           454]
          Length = 169

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ   + L    +  + I+G+TD       +  N  L   RA S 
Sbjct: 68  FDFDSYTVSNEYQPLLQAHAQYLKGHPQRHVLIQGNTDER---GTSEYNLALGQKRAESV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     +       +   + NRR D++
Sbjct: 125 RRTLALLGVNDSQMEAVS-LGKEKPAATGHDEASWAQNRRADLV 167


>gi|296410004|gb|ADH15778.1| OmpP6 [Haemophilus influenzae]
          Length = 141

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 37  LQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 93

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++  +S +   +  +      +   NRR
Sbjct: 94  LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 141


>gi|290474098|ref|YP_003466974.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004]
 gi|289173407|emb|CBJ80184.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus bovienii
           SS-2004]
          Length = 167

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
             N   F         +   +L      L  +  +  +I GH D          N  L  
Sbjct: 61  NNNIVYFGFDKYDINSDFAQMLDAHAVFLRSNPSIKVTIEGHADER---GTPEYNIALGE 117

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA +    L   GVS D++  I  +   +  +      +   NRR  I+
Sbjct: 118 RRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYSKNRRAVIV 166


>gi|30250467|ref|NP_842537.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
 gi|30139308|emb|CAD86460.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 231

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD   ++  P     L      L      + I  G+TD          N  LS+ RA
Sbjct: 111 DALFDFDKAVLKPAGKQALDDFAANLEGVNYDLIIAVGYTDRI---GSEAYNKNLSIKRA 167

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD---PMN--------SANRRIDILVEDR 341
            +    L+  G+  DRI    G                         + +RR++I V   
Sbjct: 168 EAVKSYLVSKGIGSDRIFT-DGKGEANPVTGDSCHGTKATRALIDCLAPDRRVEIEVAGT 226

Query: 342 Q 342
           +
Sbjct: 227 R 227


>gi|238026336|ref|YP_002910567.1| OmpA domain-containing protein [Burkholderia glumae BGR1]
 gi|237875530|gb|ACR27863.1| OmpA domain protein [Burkholderia glumae BGR1]
          Length = 170

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ   + L       I I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYSVSDQYQPLLQAHAQYLKSHPARHILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     + +     +   + NRR DI+
Sbjct: 120 RAEAVRRGLSLLGVPDSQMEAVS-LGKEKPQATGHDEAAWAQNRRADIV 167


>gi|329848731|ref|ZP_08263759.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
           C19]
 gi|328843794|gb|EGF93363.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
           C19]
          Length = 177

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 32/103 (31%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   S    +   VL      L       I I G+ D          N+ L   R
Sbjct: 68  DRVYFDTDQSSIRADAQAVLSAQAAWLVRYPAVKIRIEGNADER---GTREYNFALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332
           A +    L   GV   RIS IS +   +       +     NR
Sbjct: 125 AQAVADFLTSKGVVPSRISTIS-YGKEQPIATGADEDAWQQNR 166


>gi|119896920|ref|YP_932133.1| hypothetical protein azo0629 [Azoarcus sp. BH72]
 gi|119669333|emb|CAL93246.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 198

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +++   PE+   L ++   +         I GHTD         DN  L L RA + 
Sbjct: 97  FETAAARLTPESRNQLPRVLAQVRSRPAPDISIIGHTDTV---GSNADNEALGLVRARTV 153

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
            ++L  +GV+  R   ++      L + +  +   + NRR+++ V 
Sbjct: 154 LKLLEAAGVTA-REITVTSHGERNLLVPTADNTDEARNRRVEVTVR 198


>gi|85704497|ref|ZP_01035599.1| OmpA/MotB domain protein [Roseovarius sp. 217]
 gi|85670905|gb|EAQ25764.1| OmpA/MotB domain protein [Roseovarius sp. 217]
          Length = 192

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD  SS    +    L  + +V+         I GHTD+      A  N RLSL RA
Sbjct: 88  QISFDFDSSALRADQKPKLVTLCKVMQTADIGSFRIVGHTDS---SGSASYNERLSLLRA 144

Query: 293 YSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
               + L    G+  +R+  + G     L   +DP + ANRR++ 
Sbjct: 145 QEVKRHLETDCGIEPERLEAV-GVGEAFLLDKADPDSDANRRVEF 188


>gi|209526860|ref|ZP_03275380.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
 gi|209492731|gb|EDZ93066.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
          Length = 285

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 83/241 (34%), Gaps = 9/241 (3%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T + + L      ++  YQ    +      +       +      +  +   +    +
Sbjct: 50  PNTSSEMPLTEQLLRREPAYQPSFPDRETPRLTPPKASPTSLTPEVQQTLQPQLQQLQQD 109

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +        L         A   ++RLQ + +++++  S    +          +R+G 
Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQLTAPSSPEAENIPPPTPRTARSRSGS 169

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            + I+   +  +F+  SS   P   V+L  +   L +    V+ + GHTD        + 
Sbjct: 170 GL-IMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SARRQQ 225

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKIS-GFAHHRLKIASDP--MNSANRRIDILVED 340
           N  LS  +A +  Q L  + V       ++ G+   R  + +        NRRI++ +  
Sbjct: 226 NLVLSSAQAEAVVQYL-SNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284

Query: 341 R 341
            
Sbjct: 285 P 285


>gi|89052772|ref|YP_508223.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88862321|gb|ABD53198.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 315

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 16/313 (5%)

Query: 42  TVLM-AFFLVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNK 97
           T ++ A F+ +     T D T  A  +  +   P G     A+         P + +   
Sbjct: 7   TAMVCAAFICLPSAGQTFDLTFPAAAELVHISDPEGGQHPIATGPWSATSGVPTQIASGD 66

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
           +     +    +     +  T +++   +     F    S                 +  
Sbjct: 67  VQQFTWQVTGVDVTTAGLLMTLREQIEAQGYTVPFTCFASACGGFDFRHALPVGAAPEMH 126

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
               D        E+                   L  +                  GV  
Sbjct: 127 VDLGDFHYLTALSEDGDTRAALMISRGGAIGFVHLALIQPPSDPAPVIQSTRAPEPGVDD 186

Query: 218 ETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272
             + T ++  +    + P+    F+  +S    E    L  +   LA       +  GHT
Sbjct: 187 SPSPTDLIERLRTTGSAPLDDLQFETGASQLSGERYGSLTALAAFLAEDPARSIVLVGHT 246

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           DA         N  LS  RA +  Q L  + GV   ++ +  G      + ++       
Sbjct: 247 DAL---GSLSGNIALSRSRALAVLQFLTGELGVDPAQV-EFQGIGFLSPRASNTTPEGRE 302

Query: 331 -NRRIDILVEDRQ 342
            NRR+++++   +
Sbjct: 303 ANRRVEVVLTTAE 315


>gi|163754882|ref|ZP_02162003.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1]
 gi|161324949|gb|EDP96277.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1]
          Length = 560

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 11/110 (10%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+         +      +  +   + I  HTD+      A  N  LS  RA +    L
Sbjct: 454 GSATLTAAAKREIDTKLLPVLQTGVSVEIASHTDSR---GSAASNEALSQRRAQAVTNYL 510

Query: 300 MKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
           +  G++  +I   +G+   RL          ++  + ANRR    V D++
Sbjct: 511 ISKGINSSKIVS-NGYGERRLLNRCKDGVSCTEREHLANRRTQFRVLDQK 559


>gi|109897724|ref|YP_660979.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109700005|gb|ABG39925.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 287

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           +       F    + +L    D     +  + K+S+     +   L  IG+ L   +++ 
Sbjct: 153 NFAAPYENFAQCVSNLLPYSFDDIAYTILAYQKNSTELTKYSQRRLNMIGQYLKEDSDME 212

Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            +   G++D+         N  LS+ RA          GV+  RI +++G    R    +
Sbjct: 213 LVLLDGYSDSY---GGRDMNKTLSVSRAVEIKNYFSDMGVAPQRI-EVTGHGERRHIAPN 268

Query: 325 DPM--NSANRRIDI 336
                 + NRR+ I
Sbjct: 269 TNEMSRAKNRRVVI 282


>gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae L20]
 gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 364

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L  +   + +   S   I + G+TD          N +LS 
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338
            RA +    ++  G     ++ + G+           D +            +RR+++ V
Sbjct: 298 RRAETVANYIVSKGALAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356

Query: 339 EDRQ 342
           +  +
Sbjct: 357 QGTK 360


>gi|229515215|ref|ZP_04404675.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae TMA 21]
 gi|229347920|gb|EEO12879.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae TMA 21]
          Length = 172

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 66  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171


>gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
 gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
          Length = 350

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S   PE    L ++   L+        + + G  D          N  LS
Sbjct: 222 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  ++I+   G         +      P  +       +RR++I 
Sbjct: 279 QRRADSVRDYLVSKGIPAEKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 337

Query: 338 VED 340
           V+ 
Sbjct: 338 VKG 340


>gi|332520508|ref|ZP_08396970.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332043861|gb|EGI80056.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 743

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           D  S+   P     + +I   +      + I  HTD+         N  LS  RA +   
Sbjct: 636 DLGSATLTPAARAEIDRILLPVLADGVSVEIASHTDSR---GSKASNRSLSERRAQAVTN 692

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
            L+  G++  RI   +GF   RL          ++  +  NRR    V D  
Sbjct: 693 YLISKGINSSRIVS-NGFGESRLLNNCSDGVSCTERDHRINRRTQFRVIDAN 743


>gi|325982085|ref|YP_004294487.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
 gi|325531604|gb|ADZ26325.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
          Length = 225

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD  SS   P  I  L +    +      + I  G+ D          N  LSL RA
Sbjct: 109 DALFDFDSSKLKPNGIQSLNEFVTGIEGVKYDLIIAVGYADRI---GSDEYNKALSLRRA 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDR 341
            S    L+  G+    I  + G         +                 +RR++I V   
Sbjct: 166 ESVKSHLVSRGIDPSLIF-VDGKGEANPVTGNSCAGERKSKALIECLAPDRRVEIEVAGT 224

Query: 342 Q 342
           +
Sbjct: 225 R 225


>gi|85710327|ref|ZP_01041392.1| ompA family protein [Erythrobacter sp. NAP1]
 gi|85689037|gb|EAQ29041.1| ompA family protein [Erythrobacter sp. NAP1]
          Length = 320

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 65/229 (28%), Gaps = 11/229 (4%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           +++ S +       +       +        + +L  D+       K    +       +
Sbjct: 75  VQVTSADGTSTVVTVTEETTIKARGGFLGLGRETLGADALLNGLPVKVATRQWDGGLVAS 134

Query: 173 Y---FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                   L   +++     +R  D    I    +G+  +      L          +I 
Sbjct: 135 DVRFSDGDLETAEMIRSGTNQRFADNEMAIGENTAGIEKNAAATEALRGRFGDIDQYNIK 194

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLS 288
              N   FD        +    L         +   +  + G+TD++        N RLS
Sbjct: 195 STTN-VYFDTGRHNLSQQARAELCNAAAQAEATDNALLLVVGYTDST---GSQEVNQRLS 250

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
             RA S    L +  G    R+   +G A       +      + NRR+
Sbjct: 251 ERRAGSVVNFLQQQCGWKPWRMLSPTGMAEADPAADNTTAYGKAQNRRV 299


>gi|221200311|ref|ZP_03573353.1| OmpA family protein [Burkholderia multivorans CGD2M]
 gi|221205990|ref|ZP_03579004.1| OmpA family protein [Burkholderia multivorans CGD2]
 gi|221174002|gb|EEE06435.1| OmpA family protein [Burkholderia multivorans CGD2]
 gi|221179652|gb|EEE12057.1| OmpA family protein [Burkholderia multivorans CGD2M]
          Length = 277

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 17/119 (14%)

Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287
              +F  + S      P     L      +        I + GHTD        + N  L
Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDQSNRAL 215

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMN-----SANRRIDILV 338
           S  RA +  + L+  G+   RI ++ G    +      + +          +RR+ I V
Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RVEGAGSSQPVSHCPSGETPAVIACLQKDRRVTITV 273


>gi|330980557|gb|EGH78660.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 830

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L ++  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|302346547|ref|YP_003814845.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302150388|gb|ADK96649.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 653

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I++    +   +D   +   PE+   L  +  +L  +    I +  HTD   +   A  N
Sbjct: 478 INVPVLIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTD---YLGSADYN 534

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASDP----- 326
            RLS  RA +    L   G+  DR++ + G+   R                 +D      
Sbjct: 535 KRLSQRRADAVVAYLTAHGIVRDRLTPV-GYGKERPKKIRKKVTEKYPWLKENDVLTEDF 593

Query: 327 -----------MNSANRRIDILVED 340
                       N  NRR +  V  
Sbjct: 594 IKKLDKEKQEIANQLNRRTEFTVLR 618


>gi|119483418|ref|ZP_01618832.1| outer membrane protein F [Lyngbya sp. PCC 8106]
 gi|119458185|gb|EAW39307.1| outer membrane protein F [Lyngbya sp. PCC 8106]
          Length = 296

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 81/250 (32%), Gaps = 10/250 (4%)

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            SS+++  L        +       ST          +           E  +       
Sbjct: 52  PSSRSQAPLVETLLFRTSEPQSSQTSTPALNPTPLSPSPTTPQVQLTSGERQQLQTQLQE 111

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            + +             +          ++++  + R+  L D     ++T +       
Sbjct: 112 LQQQLNTLIGRTAALETQLGISRPSETLEKRLQIVDRQLSLSDQTVPNAATPTPTRTTTS 171

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            +         G+++++       +F  +++   P   V+L  +   L +     + +  
Sbjct: 172 TQAQTRFRASQGLVVTLPSD---VLFATNTNSLRPGASVILDTLIADLENYKGASVRVAA 228

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMN 328
           HTD +     A+DN  LSL +A +    L  +  SE     I G+   +  + +D     
Sbjct: 229 HTDDT---GKAQDNLSLSLQQAEAIVAYLSTAIGSEYHWVAI-GYGEGQPTVENDSTTNK 284

Query: 329 SANRRIDILV 338
             NRRI++ +
Sbjct: 285 QLNRRIEVAI 294


>gi|262195035|ref|YP_003266244.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262078382|gb|ACY14351.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 195

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    +    L +    LA++ +  + + GH D          N  L   RA + 
Sbjct: 69  FPLDSTDLPEDAREALAEAAPKLANNPDVHLYVDGHADQR---GTEEYNVALGERRARAV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
              L + GVS D +  +S F   R      ++   + NRR+D  +  
Sbjct: 126 SDYLTRMGVSADNLHLVS-FGESRPVSEQGTNVAMAKNRRVDFRLMR 171


>gi|34495565|ref|NP_899780.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
           ATCC 12472]
 gi|34101420|gb|AAQ57789.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
           ATCC 12472]
          Length = 172

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           + +  F   SS    E    +    + L    + + I+G+TDA         N  L   R
Sbjct: 65  KRSVYFAFDSSAVDGEGKTTVANHADYLKGHDKKVIIQGNTDAR---GSREYNLALGQRR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           A S    +   GV E ++  +S F   + K         + NRR DI+
Sbjct: 122 AESVKHAMEVLGVKESQLEAVS-FGKEKPKATGHSDADYAENRRADIV 168


>gi|330940416|gb|EGH43516.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 830

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L ++  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|330901436|gb|EGH32855.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 830

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L ++  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|323436227|ref|ZP_01051616.2| OmpA family protein [Dokdonia donghaensis MED134]
 gi|321496542|gb|EAQ37623.2| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 256

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 19/135 (14%)

Query: 222 TGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
             + I + D     +      FD       P+  + L+K+  V+       I +R HTD+
Sbjct: 126 PPLKIELGDDLAKTLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDS 185

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDP 326
                    N  LS  R  S  + ++   G+S  R+    G+   +L  A       ++ 
Sbjct: 186 R---APDAYNMSLSQRRNVSTIRYIVDQGGISMSRL-TGRGYGETQLTNACGNGIECTEE 241

Query: 327 MNSANRRIDILVEDR 341
            +  NRR + ++  +
Sbjct: 242 EHQLNRRSEFIIVAK 256


>gi|320095241|ref|ZP_08026939.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977825|gb|EFW09470.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 174

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S         VL     E        +++ GHTD+         N  LS  RA + 
Sbjct: 73  FEVDSDQLTARAKEVLDSLASEWSKAKPSTVTVTGHTDSV---ADDAHNLDLSKRRAKAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
              L  +G          G         ++     + NRR++I
Sbjct: 130 GDYL--AGKVPGLSLTTDGKGEAEPIGDNETEEGRAQNRRVEI 170


>gi|296130809|ref|YP_003638059.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
 gi|296022624|gb|ADG75860.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
          Length = 198

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 13/112 (11%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F   S+   P     + ++   L      +++ GHTD          N  LS  RA + 
Sbjct: 93  LFAFDSAELAPGAAGKIGELAAALPQ-GAAVAVDGHTDGL---GGDAVNVPLSQARAQAV 148

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILVED 340
              L  +    D +  ++G    +                + NRR+++ V  
Sbjct: 149 ADALTAA--RPDLVLTVTGHGSAQPVAEETTDGLDDPSGRALNRRVEVRVTG 198


>gi|288925106|ref|ZP_06419042.1| lipoprotein PG3 [Prevotella buccae D17]
 gi|288338296|gb|EFC76646.1| lipoprotein PG3 [Prevotella buccae D17]
          Length = 238

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 8/148 (5%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
             K+   +   V++  V+ V        + ++     +  +F  + S     +   L K 
Sbjct: 86  MDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTF---DSGLLFPLNKSTLSASSKTELAKF 142

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             VL +  +  + I+G+TD +      + N  LS  RA S    L K GV       ++G
Sbjct: 143 ATVLKNDPQLAVDIQGYTDRT---GGDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTG 199

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
           F        +  ++  NRR+++ +   Q
Sbjct: 200 FGSANEI-ENAAISQVNRRVEVYLYASQ 226


>gi|317177353|dbj|BAJ55142.1| flagellar motor protein MotB [Helicobacter pylori F16]
          Length = 255

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ +     P   V L K+   L +   +   + + G+TD          N  LS
Sbjct: 227 RSDVLFEFNKHTLKPAGKVELDKLYSELTNLDPTQGRVMVLGYTDRI---GSPSYNKPLS 283

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337
             RA+     L+  G+  + IS   G             +    +A  N     RR++I 
Sbjct: 284 QKRAHEVMSYLISKGIPANAISS-QGRGEENPVTGSTCNNVKPRAALINCLAPDRRVEIE 342

Query: 338 VED 340
           ++ 
Sbjct: 343 IQG 345


>gi|53719675|ref|YP_108661.1| OmpA family protein [Burkholderia pseudomallei K96243]
 gi|76810742|ref|YP_333152.1| OmpA family protein [Burkholderia pseudomallei 1710b]
 gi|126453035|ref|YP_001065862.1| OmpA family outer membrane protein [Burkholderia pseudomallei
           1106a]
 gi|134282791|ref|ZP_01769494.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
 gi|167720016|ref|ZP_02403252.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           DM98]
 gi|167739026|ref|ZP_02411800.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 14]
 gi|167816239|ref|ZP_02447919.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 91]
 gi|167824618|ref|ZP_02456089.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 9]
 gi|167846148|ref|ZP_02471656.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           B7210]
 gi|167894724|ref|ZP_02482126.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           7894]
 gi|167903126|ref|ZP_02490331.1| outer membrane protein, OmpA family [Burkholderia pseudomallei NCTC
           13177]
 gi|167911363|ref|ZP_02498454.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 112]
 gi|167919383|ref|ZP_02506474.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           BCC215]
 gi|217423544|ref|ZP_03455045.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
 gi|226196265|ref|ZP_03791848.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811866|ref|YP_002896317.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           MSHR346]
 gi|242314198|ref|ZP_04813214.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1106b]
 gi|254180141|ref|ZP_04886740.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1655]
 gi|254188449|ref|ZP_04894960.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254198064|ref|ZP_04904486.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
 gi|254259492|ref|ZP_04950546.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1710a]
 gi|254297974|ref|ZP_04965427.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           406e]
 gi|52210089|emb|CAH36063.1| OmpA family protein [Burkholderia pseudomallei K96243]
 gi|76580195|gb|ABA49670.1| OmpA family protein [Burkholderia pseudomallei 1710b]
 gi|126226677|gb|ABN90217.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1106a]
 gi|134245877|gb|EBA45968.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
 gi|157808001|gb|EDO85171.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           406e]
 gi|157936128|gb|EDO91798.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169654805|gb|EDS87498.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
 gi|184210681|gb|EDU07724.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1655]
 gi|217393402|gb|EEC33423.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
 gi|225931663|gb|EEH27667.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506719|gb|ACQ99037.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           MSHR346]
 gi|242137437|gb|EES23839.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1106b]
 gi|254218181|gb|EET07565.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1710a]
          Length = 236

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 16/116 (13%)

Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
             MF    +       +    L ++ + L     + +SI G+TD          N +LS 
Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDIL 337
            RA +    L+ +GV  D +    G       +  D           + NRR++++
Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229


>gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
 gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
          Length = 358

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 9/106 (8%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD   S         L+ +   LA + +   ++ G+TD+         N +L+L RA
Sbjct: 252 FALFDFDKSAVKE--TQALKDLAAHLAANPQAQAAVTGYTDSQ---GSKEYNEKLALRRA 306

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            +  + L  +GV+  ++  +       L  ++  +     NRR+ I
Sbjct: 307 NAIAKYLTANGVNASQL-TVKSVGETDLFASNATIAERLNNRRVTI 351


>gi|188527339|ref|YP_001910026.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
 gi|188143579|gb|ACD47996.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
          Length = 255

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|91784820|ref|YP_560026.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|91688774|gb|ABE31974.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 215

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKAILKPGGKEKLDDLASKIGSLNLEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|300722398|ref|YP_003711684.1| hypothetical protein XNC1_1421 [Xenorhabdus nematophila ATCC 19061]
 gi|297628901|emb|CBJ89484.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus nematophila
           ATCC 19061]
          Length = 176

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 36/110 (32%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             N   F         E   +L K    L  +    ++I GH D          N  L  
Sbjct: 70  NNNIVYFGFDKYDINSEFAQMLDKHAAFLRTNPSVKVTIEGHADER---GTPEYNIALGE 126

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +    L   GVS D++  I  +   +  +        + NRR  I+
Sbjct: 127 RRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYAKNRRAVIV 175


>gi|206563399|ref|YP_002234162.1| putative peptidoglycan-associated lipoprotein [Burkholderia
           cenocepacia J2315]
 gi|198039439|emb|CAR55406.1| putative peptidoglycan-associated lipoprotein [Burkholderia
           cenocepacia J2315]
          Length = 163

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   +LQ   + L       + I+G+TD       +  N  L   R+ + 
Sbjct: 62  FDFDQYSVKPEFQSLLQAHADYLRSHPARHVLIQGNTDER---GTSEYNLALGQRRSQAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
              L   GV   ++  +S     +       +   + NRR D++
Sbjct: 119 ASALQTLGVPATQLEAVS-LGKEKPVALGHDEEAWAQNRRADLV 161


>gi|296410006|gb|ADH15779.1| OmpP6 [Haemophilus influenzae]
          Length = 145

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 13  AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 72

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 73  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 128

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 129 AVLGHDEAAYSKNRR 143


>gi|85705019|ref|ZP_01036119.1| OmpA domain protein [Roseovarius sp. 217]
 gi|85670341|gb|EAQ25202.1| OmpA domain protein [Roseovarius sp. 217]
          Length = 311

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     L+ +   L         + GHTD++        N  LS  RA + 
Sbjct: 204 FGSGDNALGPGPHPSLEALAAYLLTKPNTRVALVGHTDST---GGLEGNIALSRSRAEAV 260

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             VL +  GV   ++    G  +      +   +    NRR++ ++ D
Sbjct: 261 LSVLTEIHGVPATQLEA-HGIGYLAPLAPNTTGDGRESNRRVEAVLLD 307


>gi|296159971|ref|ZP_06842791.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295889717|gb|EFG69515.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 215

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKAILKPGGKEKLDDLASKIGALNLEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|262404181|ref|ZP_06080736.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
           RC586]
 gi|262349213|gb|EEY98351.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
           RC586]
          Length = 172

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 66  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +  + L   GV  D++S +S +   +  +   SD   + NRR  ++
Sbjct: 123 RRAQAVAKYLEALGVQADQVSIVS-YGEEKPLVLGQSDEAYAKNRRAVLV 171


>gi|121600552|ref|YP_992694.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124384797|ref|YP_001026510.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126450730|ref|YP_001080211.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|167002004|ref|ZP_02267794.1| OmpA family protein [Burkholderia mallei PRL-20]
 gi|238562245|ref|ZP_00440713.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|254177630|ref|ZP_04884285.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|254199515|ref|ZP_04905881.1| OmpA family protein [Burkholderia mallei FMH]
 gi|254205830|ref|ZP_04912182.1| OmpA family protein [Burkholderia mallei JHU]
 gi|254358770|ref|ZP_04975043.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|121229362|gb|ABM51880.1| ompA family protein [Burkholderia mallei SAVP1]
 gi|124292817|gb|ABN02086.1| ompA family protein [Burkholderia mallei NCTC 10229]
 gi|126243600|gb|ABO06693.1| ompA family protein [Burkholderia mallei NCTC 10247]
 gi|147749111|gb|EDK56185.1| OmpA family protein [Burkholderia mallei FMH]
 gi|147753273|gb|EDK60338.1| OmpA family protein [Burkholderia mallei JHU]
 gi|148027897|gb|EDK85918.1| OmpA family protein [Burkholderia mallei 2002721280]
 gi|160698669|gb|EDP88639.1| ompA family protein [Burkholderia mallei ATCC 10399]
 gi|238522977|gb|EEP86418.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|243062249|gb|EES44435.1| OmpA family protein [Burkholderia mallei PRL-20]
          Length = 236

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 16/116 (13%)

Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
             MF    +       +    L ++ + L     + +SI G+TD          N +LS 
Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA-------NRRIDIL 337
            RA +    L+ +GV  D +    G       +  D    +A       NRR++++
Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLSPNRRVEVV 229


>gi|82703306|ref|YP_412872.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
 gi|82411371|gb|ABB75480.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 225

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 24/164 (14%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           DL  K    +     +                IS+   +   +FD   +   PE    L 
Sbjct: 67  DLLPKPEKKVEAPAPEPTPAPAPAPVYTEPEKISLSADQ---LFDFDKANLRPEGKQTLD 123

Query: 254 KIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
            +   L        +  G+ D          N +LS+ RA S    L+ + G+  DRI  
Sbjct: 124 DLVAKLGGVKYDTIVAIGYADRL---GSDAYNKKLSMRRAESVKAYLVNEKGIPADRIF- 179

Query: 312 ISGFAHHRLKIASDPMNSAN-------------RRIDILVEDRQ 342
           I G          D     N             RR+++ V   +
Sbjct: 180 IDGKGEANPV-TGDTCKG-NKKTKALIACLQPDRRVEVEVAGTK 221


>gi|28901295|ref|NP_800950.1| hypothetical protein VPA1440 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153835951|ref|ZP_01988618.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
 gi|260362852|ref|ZP_05775721.1| OmpA family protein [Vibrio parahaemolyticus K5030]
 gi|260880140|ref|ZP_05892495.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
 gi|260895257|ref|ZP_05903753.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|260900609|ref|ZP_05909004.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|28809808|dbj|BAC62783.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149750705|gb|EDM61450.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
 gi|308085641|gb|EFO35336.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|308091737|gb|EFO41432.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
 gi|308107011|gb|EFO44551.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|308112285|gb|EFO49825.1| OmpA family protein [Vibrio parahaemolyticus K5030]
          Length = 301

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
            +  +      I +   P  +  +  ++    ++     +    +D  I +    +    
Sbjct: 34  FSDVNVSKF-LISECLAPQREIHIAVAEHFDFDKFNIREADATSLDAFIRDIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K   +    N        QS         D        K     + +  + + 
Sbjct: 93  IVGHTDYKGSNE---YNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLKLDTSD 149

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                ++   +  +  ++  ++           V   +                      
Sbjct: 150 QARAENRRAYVMFEEAQKYDEMPFCEPPKPERKVYMTMTPH------------------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD   S    E +  L    E L      I + GHTD      +   N +L+  RA 
Sbjct: 191 ---FDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQV---GLLSYNEKLAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           +  + L K+ +   R+  ++  F   +  I   +   N+ NRR  I+ ++ +
Sbjct: 245 TVVEYL-KTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFKESE 295


>gi|15641837|ref|NP_231469.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121585809|ref|ZP_01675603.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
 gi|121727622|ref|ZP_01680725.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
 gi|147673661|ref|YP_001217371.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
 gi|153214301|ref|ZP_01949318.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
 gi|153800452|ref|ZP_01955038.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
 gi|153819810|ref|ZP_01972477.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
 gi|153824298|ref|ZP_01976965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
 gi|153826235|ref|ZP_01978902.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
 gi|153828567|ref|ZP_01981234.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
 gi|227081964|ref|YP_002810515.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
 gi|229508068|ref|ZP_04397573.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae BX 330286]
 gi|229511693|ref|ZP_04401172.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae B33]
 gi|229518832|ref|ZP_04408275.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae RC9]
 gi|229520296|ref|ZP_04409722.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae TM 11079-80]
 gi|229529142|ref|ZP_04418532.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae 12129(1)]
 gi|229607629|ref|YP_002878277.1| OmpA precursor [Vibrio cholerae MJ-1236]
 gi|254285225|ref|ZP_04960190.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
 gi|254848921|ref|ZP_05238271.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
 gi|255745403|ref|ZP_05419352.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
           CIRS 101]
 gi|262169824|ref|ZP_06037515.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae RC27]
 gi|297579354|ref|ZP_06941282.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
 gi|298498126|ref|ZP_07007933.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
 gi|9656362|gb|AAF94983.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549947|gb|EAX59965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
 gi|121630009|gb|EAX62416.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
 gi|124115449|gb|EAY34269.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
 gi|124124078|gb|EAY42821.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
 gi|126509649|gb|EAZ72243.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
 gi|126518179|gb|EAZ75404.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
 gi|146315544|gb|ABQ20083.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
 gi|148875962|gb|EDL74097.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
 gi|149740000|gb|EDM54175.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
 gi|150424497|gb|EDN16433.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
 gi|227009852|gb|ACP06064.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
 gi|227013734|gb|ACP09944.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
 gi|229332916|gb|EEN98402.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae 12129(1)]
 gi|229342662|gb|EEO07654.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae TM 11079-80]
 gi|229343521|gb|EEO08496.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae RC9]
 gi|229351658|gb|EEO16599.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae B33]
 gi|229355573|gb|EEO20494.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae BX 330286]
 gi|229370284|gb|ACQ60707.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae MJ-1236]
 gi|254844626|gb|EET23040.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
 gi|255737233|gb|EET92629.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
           CIRS 101]
 gi|262022058|gb|EEY40768.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae RC27]
 gi|297536948|gb|EFH75781.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
 gi|297542459|gb|EFH78509.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
 gi|327484390|gb|AEA78797.1| 18K peptidoglycan-associated outer membrane lipoprotein;
           Peptidoglycan-associated lipoprotein precursor; Outer
           membrane protein P6; OmpA/MotB precursor [Vibrio
           cholerae LMA3894-4]
          Length = 172

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 66  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171


>gi|207108745|ref|ZP_03242907.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1]
          Length = 150

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASP-FRNIAR 282
           SI+   ++ +F+ + S     + ++ L++I +++    +   I++RG TD +P  +   +
Sbjct: 6   SILKLPSSLLFENATSDAINQDMMLYLERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFK 65

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            ++ L+ +RAY   +VL++ GV  +++   S +        +D       N R++I 
Sbjct: 66  SHYELAANRAYRVMKVLIQYGVDPNQL-SFSSYGSTNPIAPNDSLENRMKNNRVEIF 121


>gi|167623057|ref|YP_001673351.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353079|gb|ABZ75692.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 365

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 9/152 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  L           V        + +          F  +S+     +   +
Sbjct: 211 DSDNDGVTDDLDQCPNTPTTYKVDAYGCPIFLEVESQLDIEAK-FANNSAEVEKSSYGAI 269

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           +++   +       ++I G    +     A  N  LS  RA S  ++L+ +  ++  R+S
Sbjct: 270 RELATYMKQHPNAEVTISGFASNT---GKADYNMDLSERRAASVAEILINEYDIAPGRVS 326

Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVED 340
              G+   R  +        + NRRI+  V D
Sbjct: 327 S-KGYGITRPLMEGSSAEANAVNRRIEAHVTD 357


>gi|16265946|gb|AAL16679.1|AF358690_1 flagellar motor rotation protein [Helicobacter hepaticus]
          Length = 98

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 238 DKSSSIPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTDA--SPFRNIARDNWRLSLDRA 292
           D  S+     +  + LQ++  ++    +   I +RG+TD    P  +  +DN+ LS  R+
Sbjct: 1   DSGSAEINNSDVFLYLQRMSAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARS 60

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
            S  + L+K+G+S +RI   SG+  H+    +D   + NR
Sbjct: 61  LSVMKNLIKNGISPERI-SFSGYGEHQAVAPNDS--ALNR 97


>gi|317014225|gb|ADU81661.1| flagellar motor protein MotB [Helicobacter pylori Gambia94/24]
          Length = 257

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  TTIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKT 98


>gi|307130110|ref|YP_003882126.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
           dadantii 3937]
 gi|16116638|emb|CAC82710.1| peptidoglycan-associated lipoprotein [Erwinia chrysanthemi]
 gi|306527639|gb|ADM97569.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
           dadantii 3937]
          Length = 168

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   FD       P+   +L      L  +     ++ GH D         
Sbjct: 55  LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            N  L   RA +    L   GVS D+I  +  +   +  +    +   S NRR  ++
Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167


>gi|15611819|ref|NP_223470.1| flagellar motor protein MotB [Helicobacter pylori J99]
 gi|298736519|ref|YP_003729045.1| chemotaxis protein MotB [Helicobacter pylori B8]
 gi|12229872|sp|Q9ZL29|MOTB_HELPJ RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
           MotB
 gi|4155316|gb|AAD06331.1| FLAGELLAR MOTOR PROTEIN [Helicobacter pylori J99]
 gi|298355709|emb|CBI66581.1| chemotaxis protein MotB [Helicobacter pylori B8]
          Length = 257

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|295691255|ref|YP_003594948.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295433158|gb|ADG12330.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 406

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 74/279 (26%), Gaps = 11/279 (3%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI-DEHITKNSVDLKIGSTNQKKQYQ 125
             +      +   + G +           N++D+    +     ++          +   
Sbjct: 130 DSWTLMANVIYDFAPGAWFNPFLGAGVGINRLDVKTLGQFSNVPALSDPTIPNPAIQNLT 189

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE---ENYFLPPLSKEK 182
             ++++     +      K +   + +        ++           +        K++
Sbjct: 190 VDDDDLAVAWQAIAGASIKATDKLNIDITYRYITGSEHAWQSQGSSALQPGAFAGQYKDQ 249

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L +  +                                     +   +     F    S
Sbjct: 250 SLTVGLRYSFASPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAFEAREFIVYFPFDQS 309

Query: 243 IPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           +  PE   V+ +  +         I + GHTD        + N +LS  RA +    L+ 
Sbjct: 310 VLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDT---SGSPKYNVKLSERRAKAVADALVS 366

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            GVS+D +  +         +A+        NRR  I +
Sbjct: 367 QGVSKD-VLGVDWKGESAPAVATGDGVKEPLNRRSTISI 404


>gi|255019464|ref|ZP_05291566.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
 gi|254971096|gb|EET28556.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
          Length = 93

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + G+            N +LS  RA S  Q L + GV  DR+  + G +++    ++   
Sbjct: 15  VNGYCSKV---GTYAYNLKLSKLRAESVAQYLERHGVPRDRMV-LKGHSYNDPVASNATP 70

Query: 328 NSA--NRRIDI 336
                N+R++I
Sbjct: 71  EGRFLNQRVEI 81


>gi|251790481|ref|YP_003005202.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya zeae
           Ech1591]
 gi|247539102|gb|ACT07723.1| peptidoglycan-associated lipoprotein [Dickeya zeae Ech1591]
          Length = 168

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   FD       P+   +L      L  +     ++ GH D         
Sbjct: 55  LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            N  L   RA +    L   GVS D+I  +  +   +  +    +   S NRR  ++
Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167


>gi|121998997|ref|YP_001003784.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
 gi|121590402|gb|ABM62982.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
          Length = 208

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E+    P  + +   ++ +      A+ +                        +  +++D
Sbjct: 34  EDPDAVPGEEAEDAEIETEDFDPTEAEALEDPDDAEEERLERARAEGLDPDDPLDAAVLD 93

Query: 231 QRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           +  +P+      F   SS    + I VL+   E L    +  ++I GHTD          
Sbjct: 94  EPESPLATRRVHFAFDSSNIRDDDIPVLEAHAEFLREHPDERMTIEGHTDER---GSREY 150

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           N  L   RA +  ++L  +G   D++ ++  +      +  +++   + NRR ++L
Sbjct: 151 NLALGERRAEAVERLLRANGARSDQL-EVVSYGEEDPLVDESNEDAWAENRRAELL 205


>gi|107027335|ref|YP_624846.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|105896709|gb|ABF79873.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
          Length = 119

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 6/109 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAY 293
           +        P    ++  IG  +A S     + + G+TD  P       +N  LS  RA 
Sbjct: 12  YASGDVTVEPWWASMMATIGRTIAASVPGAYVQVVGYTDNVPAGAISRGNNQALSEARAR 71

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
              ++   +GV    IS  +G         +      S NRR+++ V +
Sbjct: 72  EVARIFAAAGVPMQNISA-TGQGDADPLADNGTAPGRSRNRRVEVTVSN 119


>gi|157374997|ref|YP_001473597.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157317371|gb|ABV36469.1| OmpA domain protein [Shewanella sediminis HAW-EB3]
          Length = 179

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + +   FD   S    +   VLQ  G  L     V   I GH D          N  L  
Sbjct: 73  KEHVIYFDFDRSSVSMQFAEVLQAHGNYLVEHPNVRLMIEGHADER---GTPEYNIALGE 129

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +  + L   GV   ++S +S +   +      +D   + NRR  ++
Sbjct: 130 RRAKAVAKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDGFAINRRAVLV 178


>gi|302339083|ref|YP_003804289.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301636268|gb|ADK81695.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 384

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L +    +    S     +    +L E    G+++++ +      F    +  LP+ +
Sbjct: 239 ADLSEGNTAVHEAGSDGSDRDDDTSILVEERSEGVVLTLPNIH----FKPDEAEILPQEV 294

Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L ++  VL+   +    + GHT              LS+DRA      L + G+ E R
Sbjct: 295 SRLDELARVLSQIRDTSFLVVGHTADV---GTKESQKELSVDRARRIISELSQRGLDESR 351

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
                G    +   ++D       NRR++I + +
Sbjct: 352 FL-YDGVGGTQPVASNDNEEGRKKNRRVEIFLLE 384


>gi|329850857|ref|ZP_08265702.1| ompA family protein [Asticcacaulis biprosthecum C19]
 gi|328841172|gb|EGF90743.1| ompA family protein [Asticcacaulis biprosthecum C19]
          Length = 263

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 12/246 (4%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
            L   E   + SV   +           +      LS      +  + L +       L 
Sbjct: 17  TLPGVESDVRASVVKALADNGFSDVRAEVSGQTVTLSVGDTVANPVSHLEQAKAVVTKLD 76

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI----SSTLSGLVADNIVKG 214
                   ++  E   +   +          + ++          +S L  +  DN    
Sbjct: 77  GKVSEVHFLSMTEATPVQVAAANPSALKLPTEVIKGEKATTIVATNSNLPAVAGDNARDA 136

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHT 272
            +         IS    +    +   +   + ++  +L ++ +V+A     +   I G+T
Sbjct: 137 AIEVARSCDDRISAAMGKRRLEYRFGTYELIGDSEPLLDELSKVVADCPADVKLIIAGYT 196

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330
           DA+     A+ N  +SL RA +A   L+K GV   RI ++ G         +      +A
Sbjct: 197 DAT---GDAKANQLISLARAQTAADGLVKRGVDAGRI-QVQGMGGAAPVADNATPEGRAA 252

Query: 331 NRRIDI 336
           NRRI I
Sbjct: 253 NRRIVI 258


>gi|312881847|ref|ZP_07741618.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309370493|gb|EFP97974.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 293

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 24/297 (8%)

Query: 46  AFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
            FF   + +++   +       Y     ++          E             +     
Sbjct: 12  CFF--FFSLSSWGLEK-----HYVAKPMQSQWQMIANTPLECRMVHPIPNYGDAVFSSYA 64

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
             K ++D ++       Q + +       S        K +  R  ++            
Sbjct: 65  SKKINLDFELKMKRPMGQTRDVSLVSMPPSWRPGDRADKLTTLRFFQQFDGYVGGQTAWN 124

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            + + E    P  S ++  +   +  +      +SS L     +     +    + +   
Sbjct: 125 ILGELEKGRYPTFSYQEWRSRNERIEVA-----LSSVLFQQSYNVFSDCIANLLSYSFED 179

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD 283
           I+         +D+SS     ++   L KI E +  + ++  +    +TD    ++ +  
Sbjct: 180 IAFTILH----YDRSSVELNKQSQKRLAKIAEYIKQTKDIDLVLVSTYTDNEDSKSAS-- 233

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              LS  RA +  +     G+ EDRI ++ G+   R    +        NRR+ I +
Sbjct: 234 -QGLSEQRAKALQRYFKSLGLPEDRI-QVQGYGKRRPIDDNASPIGKDRNRRVVISL 288


>gi|260432166|ref|ZP_05786137.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415994|gb|EEX09253.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 299

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  +          L  +   L+ +  V  ++ GHTD +      + N  +S  R
Sbjct: 191 DDLSFESGAVALGEGPFASLALLAGYLSDNPGVRLALVGHTDDT---GDLQANINVSTRR 247

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A +    L++  GV  +R+    G  +     ++        NRR++ ++ 
Sbjct: 248 AQAVRARLIEAHGVDPERVEA-QGVGYLSPLTSNATPEGRELNRRVEAVLL 297


>gi|260581134|ref|ZP_05848955.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
 gi|260092263|gb|EEW76205.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 322 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 353


>gi|229846196|ref|ZP_04466308.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
 gi|229811200|gb|EEP46917.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
          Length = 359

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 212 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 271

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 272 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 327

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 328 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359


>gi|187251682|ref|YP_001876164.1| outer membrane protein [Elusimicrobium minutum Pei191]
 gi|186971842|gb|ACC98827.1| Outer membrane protein [Elusimicrobium minutum Pei191]
          Length = 172

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 39/136 (28%), Gaps = 13/136 (9%)

Query: 215 VLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAHST----EVIS 267
           V      T ++I + +         F             VL     ++   T      I 
Sbjct: 41  VDVVVEETPVIIDVQNTEIALRQVNFALDKYNLSDAAKKVLADNAALIKTKTANAAFNIV 100

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + GH D          N  L   RA        + GV    I  +S +   +        
Sbjct: 101 VEGHCDER---GTISYNIALGEKRANEVKNYYTRLGVPAKNIVTVS-YGEEKPLCYDATE 156

Query: 328 N--SANRRIDILVEDR 341
           N  + NRR + ++  +
Sbjct: 157 NCYAKNRRAETVLTVK 172


>gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
 gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21]
          Length = 358

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358


>gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
 gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
          Length = 361

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 214 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 273

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 274 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 329

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 330 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 361


>gi|145631210|ref|ZP_01786983.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
 gi|144983137|gb|EDJ90632.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
          Length = 314

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 167 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 226

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 227 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 282

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 283 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 314


>gi|145627861|ref|ZP_01783662.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
 gi|144979636|gb|EDJ89295.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
          Length = 358

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358


>gi|16273088|ref|NP_439322.1| outer membrane protein P5 [Haemophilus influenzae Rd KW20]
 gi|1171899|sp|P43840|OMP51_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
           Precursor
 gi|1574091|gb|AAC22819.1| outer membrane protein P5 (ompA) [Haemophilus influenzae Rd KW20]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 322 TGATCDQVKGRKALIACFAPDRRVEIAVNGTK 353


>gi|319954930|ref|YP_004166197.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319423590|gb|ADV50699.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 366

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAY 296
             S+    E   ++      +      + +    HTD+      +  N  LS  RA +  
Sbjct: 259 SGSATLTSEAKSIIDNRLMPVLAQNPGVKVELASHTDSQ---GASSSNQDLSERRAKAVA 315

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
             L+  GV+   +   +G+   +L          +   ++ANRR    +
Sbjct: 316 DYLISKGVNSSLLVA-NGYGETKLLNRCKDGVSCTAREHAANRRTQFRL 363


>gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953]
 gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua]
 gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516]
 gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F]
 gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
 gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola]
 gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII]
 gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+]
 gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92]
 gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
 gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27]
 gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
 gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor
 gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer
           membrane protein II; Flags: Precursor
 gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516]
 gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua]
 gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92]
 gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F]
 gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
 gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola]
 gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein
           [Yersinia pseudotuberculosis YPIII]
 gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein
           [Yersinia pseudotuberculosis PB1/+]
 gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
 gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004]
 gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038]
 gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27]
 gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
 gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D          N  LS
Sbjct: 225 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 281

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 282 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 340

Query: 338 VED 340
           V+ 
Sbjct: 341 VKG 343


>gi|159163741|pdb|2AIZ|P Chain P, Solution Structure Of Peptidoglycan Associated Lipoprotein
           From Haemophilus Influenza Bound To
           Udp-N-Acetylmuramoyl-L-
           Alanyl-D-Glutamyl-Meso-2,6-Diaminopimeloyl-D-Alanyl-D-
           Alanine
          Length = 134

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 7/129 (5%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
            ++       +T     +  +  + NT  F         E + +L      L  +    +
Sbjct: 5   NNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKV 64

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + G+TD          N  L   RA +    L   GV   ++  +S +   +  +    
Sbjct: 65  LVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHD 120

Query: 327 MNS--ANRR 333
             +   NRR
Sbjct: 121 EAAYSKNRR 129


>gi|56698574|ref|YP_168951.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680311|gb|AAV96977.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
          Length = 304

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S          L ++ ++L+ + E+  +  GHTD          N  LS  RA + 
Sbjct: 200 FATGSDALGEGPFDTLAELAQLLSANAELRLVLVGHTDTV---GGLEPNIELSRKRAGAV 256

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L+ + G+  D+IS   G  +     ++        NRR++ ++  
Sbjct: 257 RARLVEEYGIPADQISA-DGVGYLAPIASNLTPEGREANRRVEAVMLS 303


>gi|257483657|ref|ZP_05637698.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331012188|gb|EGH92244.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 830

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|32035883|ref|ZP_00135676.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 137

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 18/126 (14%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRL 287
             +  +FD   S   P     L      +A+    T  I + G+TD          N +L
Sbjct: 12  SSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKL 68

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDI 336
           S  RA +    L+  G +   ++ + G+           D +            +RR+++
Sbjct: 69  SQRRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEV 127

Query: 337 LVEDRQ 342
            V+  +
Sbjct: 128 QVQGAK 133


>gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
 gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
          Length = 348

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               + + G+TD          N +LS  RA S     +  GV+ D IS  +G+      
Sbjct: 261 KSAKVVVAGYTDRI---GSDAFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348


>gi|237809441|ref|YP_002893881.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
 gi|237501702|gb|ACQ94295.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
          Length = 171

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q N   F+  S     +   +LQ   + L     V   I GHTD          N  L  
Sbjct: 65  QDNVIYFNYDSDAIEGQYAQLLQTHADFLRGHNSVKVLIEGHTDER---GTPEYNIALGE 121

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA +  + +   GV   ++  +  +   +        ++   NRR  ++
Sbjct: 122 RRAKAVAKYMQNLGVDVSQL-SVVSYGEEKPADPGHAEDAFGHNRRAVLV 170


>gi|218507201|ref|ZP_03505079.1| putative outer membrane protein, OmpA family [Rhizobium etli Brasil
           5]
          Length = 208

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 13/185 (7%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D ++   ++    LPP+     L+        D  +     LS    + + +    +  
Sbjct: 14  EDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLSEPPVEPVERVYSLDEV 73

Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHT 272
           +    I         +T  F   S+         L+K+ + +        +E   I GHT
Sbjct: 74  KYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHT 133

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           DA       + N  LS  RA S   VL    G+  + +    G+    LK+ +      N
Sbjct: 134 DAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGYGERYLKVNTAGPEQEN 189

Query: 332 RRIDI 336
           RR+ I
Sbjct: 190 RRVTI 194


>gi|27366007|ref|NP_761535.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
 gi|27362207|gb|AAO11062.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
          Length = 208

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 7/181 (3%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +     +               +   LQD  +        L  D      +        +
Sbjct: 15  ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 74

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
            +    +   +F   S    P     ++++ E L       I ++G+   +     A  N
Sbjct: 75  KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 131

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
             LS  RA +  ++L+  G+++ R+ +I GF    L      +  ++ NRR+   V   +
Sbjct: 132 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSALANEGTDEVSHALNRRVVASVVGYK 190

Query: 343 G 343
           G
Sbjct: 191 G 191


>gi|317011033|gb|ADU84780.1| flagellar motor protein MotB [Helicobacter pylori SouthAfrica7]
          Length = 257

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSSLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|209695330|ref|YP_002263259.1| sodium-type flagellar protein MotY precursor [Aliivibrio
           salmonicida LFI1238]
 gi|208009282|emb|CAQ79548.1| sodium-type flagellar protein MotY precursor [Aliivibrio
           salmonicida LFI1238]
          Length = 292

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 9/150 (6%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVL 252
              K+I       V       V        +  S  D   T + FDK+S      +   L
Sbjct: 142 QSPKQIVEVGLSPVLFQEQYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKASKKRL 201

Query: 253 QKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            +I + +      +++ +  +TD+         N ++S  RA          G+  DRI 
Sbjct: 202 AQIADFIKYTKDIDLVLVATYTDS---SGAKNVNQQVSERRAVKLQNYFESIGLPADRI- 257

Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILV 338
           ++  +   R    +      + NRR+ I +
Sbjct: 258 RVHSYGERRPIADNSTPIGKNKNRRVVISL 287


>gi|163786268|ref|ZP_02180716.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
 gi|159878128|gb|EDP72184.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
          Length = 684

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 10/118 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  +     FD        ++  +L ++ + +    +  + I  HTD+       R N  
Sbjct: 567 LFFELEPIYFDFEMWDIREDSKKILDQLVKKMERYPDIHLKISSHTDSR---GTVRYNQI 623

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILV 338
           LS  RA S    +   G    R  +  GF      +       +D  +  NRR +  +
Sbjct: 624 LSEKRAESTRNYIALIGYINARRLQFKGFGELSPIVECPMLNCTDEEHQLNRRSEFEI 681


>gi|126441843|ref|YP_001058607.1| OmpA family outer membrane protein [Burkholderia pseudomallei 668]
 gi|126221336|gb|ABN84842.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 668]
          Length = 236

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 16/116 (13%)

Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
             MF    +       +    L ++ + L     + +SI G+TD          N +LS 
Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDIL 337
            RA +    L+ +GV  D +    G       +  D           + NRR++++
Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229


>gi|224539344|ref|ZP_03679883.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519039|gb|EEF88144.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 224

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ V        + ++     +  +F  +SS     +   L+++
Sbjct: 75  KMDKKAAEAAKIEGAQVEKVTDTNGLAAVKVTF---ESGILFGFNSSTLSNTSKSSLREL 131

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L         I GHTD          N ++S DRAY+    L   GVS  +  K+ G
Sbjct: 132 AQILKEDPTTDIAIVGHTDKV---GTYEANMKVSKDRAYTVENYLQDCGVSPSQFKKVEG 188

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             +++         S NRR+DI +   +
Sbjct: 189 VGYNQ--YDDSMSASQNRRVDIYMYASE 214


>gi|189184227|ref|YP_001938012.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180998|dbj|BAG40778.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
           Ikeda]
          Length = 204

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 14/145 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               S        + V  +  +    I     ++   F         E+  VL+     L
Sbjct: 62  DQVTSNNANAQQEEYVDVKHEQFLQAIH---GKHKVYFATEKFDLSEESKRVLRAQSAWL 118

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            ++ +  I I GH D          N  L   RA +  Q L+  GVS D+I   S +   
Sbjct: 119 KNNPDVKIIIEGHCDER---GTREYNLALGKKRADAVKQFLVTLGVSRDKIETTS-YGKD 174

Query: 319 RL---KIASDPMNS--ANRR-IDIL 337
           +        +   +   NRR + I+
Sbjct: 175 KPEVEVTKDNKEEAYRLNRRSVTII 199


>gi|86148066|ref|ZP_01066367.1| putative outer membrane protein [Vibrio sp. MED222]
 gi|85834126|gb|EAQ52283.1| putative outer membrane protein [Vibrio sp. MED222]
          Length = 203

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 10/163 (6%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISIIDQRN-T 234
             +E  +     +++ DL       +           +    +    G  I   + R   
Sbjct: 22  QQREAYIETPEAEQIADLQDDDKDGVVNARDTCPSTPETSQVDNDGCGETIRAEEVRQLK 81

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   S    P     +  + E L +     I I+G+            N  LS  RA 
Sbjct: 82  ILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYASKV---GSNEYNLDLSKKRAN 138

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334
           +    L+ +G+  +R+ +I G+   RL+   D    ++ NR++
Sbjct: 139 NVQDELLSNGIEPERV-RIVGYGEERLENDGDDPTSHALNRKV 180


>gi|320156521|ref|YP_004188900.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
           [Vibrio vulnificus MO6-24/O]
 gi|319931833|gb|ADV86697.1| outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Vibrio vulnificus MO6-24/O]
          Length = 208

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 9/182 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +     +               +   LQD  +        L  D      +        +
Sbjct: 15  ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 74

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284
            +    +   +F   S    P     ++++ E L       I ++G+   +     A  N
Sbjct: 75  KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 131

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDR 341
             LS  RA +  ++L+  G+++ R+ +I GF       +        + NRR+   V   
Sbjct: 132 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSA-LASEGTDEVSHALNRRVVASVVGY 189

Query: 342 QG 343
           +G
Sbjct: 190 KG 191


>gi|254458914|ref|ZP_05072337.1| OmpA/MotB [Campylobacterales bacterium GD 1]
 gi|207084185|gb|EDZ61474.1| OmpA/MotB [Campylobacterales bacterium GD 1]
          Length = 184

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P   EK+      + ++ +  +  S     V ++ ++       +     ++  + 
Sbjct: 20  ADKKPAVDEKVKEEVVAQEVEAVKTETVSAEDATVGESSMEKSDSNEMKMA---NLEKEL 76

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290
           +T  FD    +   +    +     V  ++ +  ++   G+ D          N+ L L 
Sbjct: 77  STVYFDFDKFVIRSDMESKVTNSATVANNTAKAFTVKLEGNCDEW---GSDEYNFALGLK 133

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           RA +  + LM  GV+E RI+ +S +               S NRR+D  + 
Sbjct: 134 RASTVKKALMAEGVNETRITMVS-YGESNPVCNDKTQDCWSKNRRVDFKLL 183


>gi|154508361|ref|ZP_02044003.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797995|gb|EDN80415.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
           17982]
          Length = 177

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S         VL     E        +S+ GHTD+         N  LS  RA + 
Sbjct: 76  FEVDSDQLTARAKEVLDSLASEWTKAKPSTVSVMGHTDSV---ADDAHNLDLSKRRAKAV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L   G          G         ++     + NRR++I
Sbjct: 133 GDYL--KGKVPGLSITTDGKGEAEPIGDNETDEGRAQNRRVEI 173


>gi|167035280|ref|YP_001670511.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166861768|gb|ABZ00176.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 325

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 18/229 (7%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           S +  K+             ++Q    K ++T +  K     +S          ++    
Sbjct: 23  SPDGSKEGGSNWWPFGSDKVAEQE--VKAAVTENVAKADAKSESASRWWWPFGGDDKQAK 80

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                KI     +  L +   K+   +     +   +  +   T         D+ N  +
Sbjct: 81  GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    P T+  + ++ + +       + + GH D+      A  N +LSL+RA S 
Sbjct: 141 ---------PMTLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAAANQKLSLERAASV 188

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
             +   SG+  DR+  + G      + A+D       NRR+++L+  + 
Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRSLNRRVEMLLTPQN 236


>gi|320352308|ref|YP_004193647.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320120810|gb|ADW16356.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 189

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+ P P     L         +    + + GHT +         N RLS  RA  
Sbjct: 75  LFPLGSTEPEPGQTDQLISGLRHCQVNPITPLVVTGHTCSL---GTEATNLRLSRLRAEQ 131

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
              +L   G +   ++ +SG         +      NRR+ ++
Sbjct: 132 VATLLRDRGYT---VATVSGKGATDPVSTNPTKRHLNRRVTLV 171


>gi|213620924|ref|ZP_03373707.1| hypothetical protein SentesTyp_26862 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 67

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
                 N  LS  RA     +L   GV   R+  I G         +      + NRR++
Sbjct: 4   SAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVE 62

Query: 336 ILVED 340
           ILV +
Sbjct: 63  ILVVE 67


>gi|187924986|ref|YP_001896628.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187716180|gb|ACD17404.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 215

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +I  P     L  +   +      + +  G+TD        + N RLSL 
Sbjct: 97  QADALFDFDKAILKPAGKEKLDDLASKIGALNLEVVVATGYTDRI---GSDKYNDRLSLR 153

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338
           RA +    L+  G+  +RI    G             N  N           RR+++ V
Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209


>gi|269102192|ref|ZP_06154889.1| sodium-type flagellar protein MotY precursor [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162090|gb|EEZ40586.1| sodium-type flagellar protein MotY precursor [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 297

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLA--HSTEVIS 267
                F      +L    D  +  +  +D  S      +   L +I + +      +++ 
Sbjct: 165 KPYQEFNQCLNQLLPYSFDDISFTILHYDNDSEELNELSRKRLMQIADFVRAAKDVDLVL 224

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           +  +TD+        +N  LS  RA   ++  +  G+  DRI  +  F   R    ++  
Sbjct: 225 VATYTDSF---GTKNENQDLSERRANKLHEYFISLGLPPDRIK-VQAFGERREIADNNTP 280

Query: 327 -MNSANRRIDILV 338
              + NRR+ I +
Sbjct: 281 IGRNLNRRVVISL 293


>gi|260769061|ref|ZP_05877995.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
           102972]
 gi|260617091|gb|EEX42276.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
           102972]
          Length = 294

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 85/297 (28%), Gaps = 14/297 (4%)

Query: 48  FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           F+V+   ++      +   +Y     ++    +     E             +       
Sbjct: 9   FVVLSACSSFAASALEK--RYVATPQQSSWQMATNTPLECRLVHPIPNYGEAVFTSHASK 66

Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167
           K ++D ++       + + +                + +  +  ++             +
Sbjct: 67  KINLDFELKMRRPMGETRNVSLVSMPPVWRPGESADRITNIQFFKQFDGYVGGQTAWALL 126

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           ++ E    P  S +   +  ++  +      +S+ L     +     V      +   IS
Sbjct: 127 SELEQGRYPTFSYQDWQSRDQRIEVA-----LSAVLFQPQYNAFSDCVASLLPYSFEDIS 181

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
                        S      +   L +I E + ++ ++  +   T              L
Sbjct: 182 FTILHYD---RGDSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNES-QSL 237

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           S  RA S  +     G+  DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 238 SDKRAESLQKYFESLGLPSDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|94499552|ref|ZP_01306089.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
 gi|94428306|gb|EAT13279.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
          Length = 1644

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 9/148 (6%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF---DKSSSIPLPET 248
            + +   + + +S        + ++    +   +    D     +F       S   P+ 
Sbjct: 562 AKQVQMVVRTEVSDSEKQKAKEKIIEFKNQHVYVEKKPDGDVYNLFVTFAFDRSQFKPDN 621

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
                K       S+  +++ GHT +      A  N  LSL RA S  + L  S    +R
Sbjct: 622 SFEDFKELFNSLPSSTKLTLIGHTCSI---GTAEYNLGLSLRRAESVRKALGFSDKDSER 678

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRI 334
           +  + G         +        NRR+
Sbjct: 679 VF-VEGRGMTDPAYDNSTEAGRQKNRRV 705


>gi|52842260|ref|YP_096059.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294942|ref|YP_127357.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila str. Lens]
 gi|54297971|ref|YP_124340.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila str. Paris]
 gi|148359617|ref|YP_001250824.1| peptidoglycan-associated lipoprotein [Legionella pneumophila str.
           Corby]
 gi|296107659|ref|YP_003619360.1| Peptidoglycan-associated lipoprotein precursor [Legionella
           pneumophila 2300/99 Alcoy]
 gi|129597|sp|P26493|PAL_LEGPN RecName: Full=Peptidoglycan-associated lipoprotein; AltName:
           Full=19 kDa surface antigen; AltName: Full=PPL; Flags:
           Precursor
 gi|44129|emb|CAA43033.1| lipoprotein antigen [Legionella pneumophila]
 gi|52629371|gb|AAU28112.1| peptidoglycan associated lipoprotein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53751756|emb|CAH13178.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila str. Paris]
 gi|53754774|emb|CAH16261.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila str. Lens]
 gi|148281390|gb|ABQ55478.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
           antigen) (PPL) [Legionella pneumophila str. Corby]
 gi|295649561|gb|ADG25408.1| Peptidoglycan-associated lipoprotein precursor [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610774|emb|CBX00386.1| peptidoglycan-associated lipoprotein precursor [Legionella
           pneumophila 130b]
          Length = 176

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F    S    + +  +    E L       + I GHTD          N  L   RA +
Sbjct: 71  LFAYDDSTLASKYLPSVNAQAEYLKTHPGARVMIAGHTDER---GSREYNVALGERRADT 127

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
             ++L  +GVS  +I ++  +   R       +  ++ NRR++ + E  +
Sbjct: 128 VAEILRMAGVSRQQI-RVVSYGKERPANYGHDEASHAQNRRVEFIYEATR 176


>gi|218690723|ref|YP_002398935.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
 gi|218428287|emb|CAR09211.2| putative outer membrane lipoprotein [Escherichia coli ED1a]
 gi|315298676|gb|EFU57930.1| OmpA family protein [Escherichia coli MS 16-3]
          Length = 160

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITAP 160


>gi|167563920|ref|ZP_02356836.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
           EO147]
 gi|167571055|ref|ZP_02363929.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
           C6786]
          Length = 170

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYSVQDQYQALLQQHAQYLKGHPQRHILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV++ ++  +S     +       +   + NRR D++
Sbjct: 120 RAEAVRRALSLLGVTDSQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167


>gi|317182128|dbj|BAJ59912.1| flagellar motor protein MotB [Helicobacter pylori F57]
          Length = 255

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|30314420|gb|AAP15419.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
          Length = 149

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146


>gi|83858639|ref|ZP_00952161.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853462|gb|EAP91314.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
          Length = 355

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 7/113 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288
           D      F    S    +   V+ +      +     +SI GH D       A  N  LS
Sbjct: 245 DAGFVVYFAWDRSEISSQAAAVINQAVSQARNCGVASVSIDGHADR---SGAASYNVGLS 301

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
             RA +    +++ GV    I  +  F   R  +          NRR +++++
Sbjct: 302 ERRARAVRDEMVRLGVPASAI-SLEAFGESRPAVETPDGVREPLNRRAEVMID 353


>gi|295395658|ref|ZP_06805850.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971474|gb|EFG47357.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 607

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 33/251 (13%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           +     T   +  +   N         +    +   +           S+D       + 
Sbjct: 159 EPNPQPTGPDEFQRAYSNCTCSNIPKTEEYQGEKPESVPLFYADFPAPSSDSVGIAFGDN 218

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN----IVKGVLFETTRTGILIS 227
                 +   +    +  K  +   +                   +  +   T + +  S
Sbjct: 219 AAVFTDVKLSENQRYEAPKLTEIDYRWAHQEDLSNPYGGGAIYERRYPMSLVTESVMDTS 278

Query: 228 IIDQRN--------TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPF 277
           + D+ +          +FD  S         ++  I   L  S   + ++I GHTD    
Sbjct: 279 VSDRGDSSALNVSADVLFDFDSDKVKDSDSKLIDGIANELKKSAAGQKVTIEGHTDDE-- 336

Query: 278 RNIARDNWRLSLDRAYSAYQVLM----KSGVSEDRISKISGFAHHRLKIASDPMN----- 328
               + N  LS  RA S  +VL      SG+S     +  GF   +  + +         
Sbjct: 337 -GDEKYNVDLSNRRAESVKKVLEPKVKGSGIS----FETKGFGESQPILPNRTAGGDAIK 391

Query: 329 ---SANRRIDI 336
              + NRR+  
Sbjct: 392 KNQAKNRRVSF 402


>gi|271499765|ref|YP_003332790.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
 gi|270343320|gb|ACZ76085.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
          Length = 168

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   FD       P+   +L      L  +     +I GH D         
Sbjct: 55  LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 111

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            N  L   RA +    L   GVS D+I  +  +   +  +    +   S NRR  ++
Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167


>gi|218887301|ref|YP_002436622.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758255|gb|ACL09154.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 311

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 43/235 (18%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           + +L+R      +  +          E    L PL          ++ +++L    +   
Sbjct: 73  RVTLSRIGSHFGEAGEQALGVTGSVPERIRLLEPLLARPAQVFAHQREIKELLFPGAELP 132

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
            G+    + K +       G+++++ D     +F          +  +L  + EVL + T
Sbjct: 133 PGIDRSTLDKNLRILEHPEGVVLALTDDL---LFAPGQWQLREASRPLLGMLAEVLEYVT 189

Query: 264 EVISIRGHTDAS-----------------PFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             ++I GH+D                            + L+  RA +  +  ++  +  
Sbjct: 190 ADVAIAGHSDPRTEGVSALEQAAGAGGGAGVVTGDAIGYELAGRRALTVLEYFVQRKLDP 249

Query: 307 DRISKISGFAHHRLK---------------IASDPMNS-------ANRRIDILVE 339
            R   ++G+   R                  + +P  +        NRR++ILV+
Sbjct: 250 ARF-SVAGYGPDRPSLAGQPPSPGAPGVPEASGEPDAAAGSSDPDRNRRVEILVK 303


>gi|319427914|gb|ADV55988.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
          Length = 202

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    ++ I   L        +I GHT  +        N  LS 
Sbjct: 74  KEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +    L     +   R++ I G+   R  +      +   NRR+
Sbjct: 131 ERADAVTAALADRFNIERSRLTAI-GYGSSRPIVLEQTPEAEMRNRRV 177


>gi|218130801|ref|ZP_03459605.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
 gi|317474322|ref|ZP_07933598.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|217987145|gb|EEC53476.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
 gi|316909632|gb|EFV31310.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 225

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K           +     V+ +      +    D  +  +F  +SS    +    L+ + 
Sbjct: 75  KMDKKAAEAAKIEGAQVEVVKDANNLDAVKVTFD--SGILFAFNSSTLSNDAKASLRDLA 132

Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L   +T  I+I GHTD          N ++S +RAY+    L   GVS  +  ++ G 
Sbjct: 133 KILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGV 189

Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342
            ++          S NRR+ I +   +
Sbjct: 190 GYNE--YDESLSASQNRRVVIFMYASE 214


>gi|83719210|ref|YP_441918.1| OmpA family outer membrane protein [Burkholderia thailandensis
           E264]
 gi|167580762|ref|ZP_02373636.1| outer membrane protein, OmpA family [Burkholderia thailandensis
           TXDOH]
 gi|167618865|ref|ZP_02387496.1| outer membrane protein, OmpA family [Burkholderia thailandensis
           Bt4]
 gi|257138089|ref|ZP_05586351.1| OmpA family outer membrane protein [Burkholderia thailandensis
           E264]
 gi|83653035|gb|ABC37098.1| outer membrane protein, OmpA family [Burkholderia thailandensis
           E264]
          Length = 170

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYSVQDQYQPLLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     +       +   + NRR D++
Sbjct: 120 RAEAVRRALSLLGVGDSQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167


>gi|323137848|ref|ZP_08072923.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
 gi|322396851|gb|EFX99377.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
          Length = 477

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           R   +F+   S++      +V      VL      I +  HTD      I   N   +  
Sbjct: 371 RTPIIFETDDSAVAADSAPLVDALTATVLRCRAATIEVAAHTDNF---GIEEINRSRTKR 427

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           RA      L+K+G    R+S   G+   R    +D     + NRR++ +V 
Sbjct: 428 RAQVLVDRLIKAGADPSRVSAA-GYGSERPVAPNDSDENRARNRRVEFVVR 477


>gi|254510741|ref|ZP_05122808.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221534452|gb|EEE37440.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 300

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F              L  + + LA +     ++ GHTD +      + N  +S  RA + 
Sbjct: 196 FRTGEVALGEGPFASLTLLADYLADNPGTRLALVGHTDDT---GDLQANIAVSTKRAEAV 252

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L++  GV+ DRI    G  +     ++        NRR++ ++ 
Sbjct: 253 RARLIETYGVAADRIEA-QGVGYLAPITSNATPAGRDINRRVEAVLL 298


>gi|332525605|ref|ZP_08401760.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
           JA2]
 gi|332109170|gb|EGJ10093.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
           JA2]
          Length = 180

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +   E   V+    + L    T  ++  GHTD          N  L   RA 
Sbjct: 77  VYFDFDSYVVKDEYKPVIDANAKFLTLDKTVRLTAEGHTDER---GGREYNLALGQKRAE 133

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           +  + L   G +  ++  +S F   R         +   NRR+++
Sbjct: 134 AVVKALQVMGAAAGQVEPVS-FGKERPADPGHDEAAWSKNRRVEL 177


>gi|325520557|gb|EGC99637.1| OmpA/MotB family outer membrane protein [Burkholderia sp. TJI49]
          Length = 163

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    P+   +LQ   + L       + I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDSYSVKPDYQSLLQAHADYLRSHPARHVLIQGNTDER---GTSEYNLALGER 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GV   ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161


>gi|30314414|gb|AAP15416.1| outer membrane lipoprotein precursor [Burkholderia multivorans ATCC
           BAA-247]
          Length = 149

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146


>gi|261880624|ref|ZP_06007051.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
 gi|270332665|gb|EFA43451.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
          Length = 222

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 5/147 (3%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           K +    +   A      V   T   G+    +   +  +FD + +     +   L K  
Sbjct: 68  KHMDKVAAETAAQVKNAKVEEVTDANGLKAVKVTFDSGILFDLNQATLNSSSKKELAKFS 127

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            VL  ++   + I G+TD          N  LS  RA S    L   GVS  ++  + G 
Sbjct: 128 NVLKENSSCHVDIYGYTDR---SGNDAINVPLSQKRAQSVANYLSSCGVSNTQMQNVVGK 184

Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342
                   +  ++  NRR+++ +   Q
Sbjct: 185 GSQDEI-ENKRVSKVNRRVEVYLYASQ 210


>gi|84687276|ref|ZP_01015156.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664709|gb|EAQ11193.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
          Length = 222

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +T  F+ +S++   +   +L +    +    E    + GHTD          N +L L 
Sbjct: 71  PDTVNFEFNSAVLDGQARQILARQASFIRQFPEVHFRVYGHTDKV---GSNAYNRQLGLR 127

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           RA +        G+S  R+  +  +   +  +A
Sbjct: 128 RAQAVVNYFASQGISRSRVEAVVTYGETQPLVA 160


>gi|262396480|ref|YP_003288333.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
           Ex25]
 gi|262340074|gb|ACY53868.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
           Ex25]
          Length = 339

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            FD    +   +    L  +   ++       I I GHTD       +  N  +S  RA 
Sbjct: 210 SFDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNV---GSSLANLSVSRTRAE 266

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              + L++ G+ +  + +           +++     + NRR+ + +    
Sbjct: 267 QVAEALVELGIDKS-MIETRAHGSRYPIASNNSTKGQAKNRRVTLRLVRDN 316


>gi|213422612|ref|ZP_03355677.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 90

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 15/84 (17%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-- 325
           + G TD          N  LS  RA S    L+  G+  D+IS   G         +   
Sbjct: 1   VLGFTDRI---GSDAYNQGLSEKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCD 56

Query: 326 ---PMNSA------NRRIDILVED 340
              P  +       +RR++I V+ 
Sbjct: 57  NVKPRAALIDCLAPDRRVEIEVKG 80


>gi|83859799|ref|ZP_00953319.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852158|gb|EAP90012.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 170

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F         E    L++    L+      I I G+ D          N  L   R
Sbjct: 60  DRVFFALDQHTLSNEARATLRRQAAWLSSYPGARILIAGNCDER---GTREYNLALGARR 116

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           A +A   L+  GV   RIS +S +   R           + NR
Sbjct: 117 ANAARDFLVSQGVDPSRISTVS-YGKERPVCNQSTEQCWATNR 158


>gi|254779211|ref|YP_003057316.1| flagellar motor protein MotB [Helicobacter pylori B38]
 gi|254001122|emb|CAX29077.1| Chemotaxis protein MotB (Motility protein B) [Helicobacter pylori
           B38]
          Length = 257

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   +  +F+ + S     + ++ L++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSNLLFENATSDAINQDMMLYLERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV  +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLMQYGVDPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|163854962|ref|YP_001629260.1| peptidoglycan-associated lipoprotein [Bordetella petrii DSM 12804]
 gi|163258690|emb|CAP40989.1| peptidoglycan-associated lipoprotein [Bordetella petrii]
          Length = 167

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           S++ Q+ +  FD  S     +   +++     LA   +    I+G+TD       A  N 
Sbjct: 55  SVLAQQRSVYFDFDSYTVPDQYRGLVETHARYLASHQQQRVQIQGNTDER---GGAEYNL 111

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            L   RA +  +++   GVS+ +I  IS F   + +         + NRR DI
Sbjct: 112 ALGQRRADAVRRMMTLLGVSDAQIETIS-FGKEKPRATGTTEADFAENRRADI 163


>gi|269963500|ref|ZP_06177826.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831797|gb|EEZ85930.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 91

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + I G++D +        N +L+  RA +        G++ DR+  + G        ++
Sbjct: 8   QVEINGYSDTT---GSEAYNQQLTEKRAQAVADHFQAEGIAADRM-TVKGMGEANPVASN 63

Query: 325 DPMNSA--NRRIDILV 338
           +       NRR++++V
Sbjct: 64  ETREGREENRRVEVVV 79


>gi|237802142|ref|ZP_04590603.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024999|gb|EGI05055.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 830

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+IN           +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTINTNAEPGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|254466910|ref|ZP_05080321.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206687818|gb|EDZ48300.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 192

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 10/140 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +   V  +        SI     +   F  +           L +  +   
Sbjct: 56  VMDDGAEGFMTPHVTPDGKPVCRRGSICGVMPSDQFFATNKHQINAAGRKRLTEFFQKAQ 115

Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +     +  GHTD+         N  LS  RA +  QV   +G     ++ I  +    
Sbjct: 116 SNGARSFVIAGHTDSR---ASDEYNIGLSQRRANAVAQVARSAG---AHVNDIRAYGERE 169

Query: 320 LKIASDPMN--SANRRIDIL 337
            ++ +      + NRR++I 
Sbjct: 170 PQVPNTSAANMAKNRRVEIY 189


>gi|205355449|ref|ZP_03222220.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346683|gb|EDZ33315.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 317

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKTSLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|145637084|ref|ZP_01792747.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
 gi|145269738|gb|EDK09678.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
          Length = 358

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358


>gi|312114121|ref|YP_004011717.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219250|gb|ADP70618.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 509

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F ++S++   + +  + ++   L        +   G TD +        N  LSL+RA S
Sbjct: 406 FHRNSAVLDDKAMQDVPRLARFLKSDANGKDLLLLGFTDGT---GAFETNKALSLNRATS 462

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               L+  GV  ++I  + G+        +        NRR+++ ++D
Sbjct: 463 FKNALVAEGVPANKI-TVKGYGSLLPVGCNTSDAGQSANRRVEVWMKD 509


>gi|209517619|ref|ZP_03266457.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
 gi|209501915|gb|EEA01933.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
          Length = 168

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 66  FDFDSYSVKDDYQTLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     +       +   + NRR D++
Sbjct: 123 RRSLALMGVTDSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 165


>gi|71738017|ref|YP_272433.1| OmpA domain-containing protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558570|gb|AAZ37781.1| OmpA domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 830

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVNCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|91227603|ref|ZP_01261907.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
 gi|262394683|ref|YP_003286537.1| OmpA [Vibrio sp. Ex25]
 gi|269967693|ref|ZP_06181743.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
 gi|91188496|gb|EAS74789.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
 gi|262338277|gb|ACY52072.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
           Ex25]
 gi|269827780|gb|EEZ82064.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
          Length = 174

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 74  FAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER---GTPEYNIALGERRAQAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D+IS +S +   +  +        + NRR  ++
Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173


>gi|332286925|ref|YP_004418836.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
 gi|330430878|gb|AEC22212.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
          Length = 165

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           S + Q+ +  FD  S     +   +++     LA   +    I G+ DA      +  N 
Sbjct: 53  SPLAQQRSVYFDFDSYTVPDQYRSLVEMHASYLASHAQQNILIEGNADAR---GGSEYNL 109

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            L   R+ +  +++   GV+  +I  IS F   R K   +     + NRR DI+
Sbjct: 110 ALGQRRSEAVARMMTLLGVNAGQIEAIS-FGKERPKATGNTEADYAENRRADIV 162


>gi|119472858|ref|ZP_01614765.1| putative Component of sodium-driven polar flagellar motor
           [Alteromonadales bacterium TW-7]
 gi|119444690|gb|EAW25997.1| putative Component of sodium-driven polar flagellar motor
           [Alteromonadales bacterium TW-7]
          Length = 292

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q+ A KI+  +S +           +     +  S  D   T M +  +SS     +
Sbjct: 141 QDWQNSADKIAVGISSVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199

Query: 249 IVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L KI E L +  + E ISI  +TD+        +N  LS  RA +    ++  GV E
Sbjct: 200 QQRLDKIAEYLKNDSTIESISIDSYTDSY---GGRWNNLDLSRKRAKAIKDYMVSLGVDE 256

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +++   +GF   R    +D       NRR+ I +
Sbjct: 257 NKVKT-TGFGEKRFVDTNDNILGRDKNRRLVIQI 289


>gi|26248968|ref|NP_755008.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
 gi|91211939|ref|YP_541925.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
 gi|110642766|ref|YP_670496.1| putative outer membrane lipoprotein [Escherichia coli 536]
 gi|117624826|ref|YP_853739.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
 gi|191174577|ref|ZP_03036072.1| OmpA family protein [Escherichia coli F11]
 gi|218559525|ref|YP_002392438.1| outer membrane lipoprotein [Escherichia coli S88]
 gi|227888171|ref|ZP_04005976.1| OmpA family protein [Escherichia coli 83972]
 gi|237706807|ref|ZP_04537288.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300986825|ref|ZP_07177814.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|300990725|ref|ZP_07179310.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|301050475|ref|ZP_07197354.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|306812477|ref|ZP_07446675.1| putative outer membrane lipoprotein [Escherichia coli NC101]
 gi|331658753|ref|ZP_08359695.1| YfiB [Escherichia coli TA206]
 gi|26109374|gb|AAN81576.1|AE016764_258 Putative lipoprotein yfiB precursor [Escherichia coli CFT073]
 gi|91073513|gb|ABE08394.1| putative lipoprotein YfiB precursor [Escherichia coli UTI89]
 gi|110344358|gb|ABG70595.1| putative lipoprotein YfiB precursor [Escherichia coli 536]
 gi|115513950|gb|ABJ02025.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
 gi|190905150|gb|EDV64794.1| OmpA family protein [Escherichia coli F11]
 gi|218366294|emb|CAR04045.2| putative outer membrane lipoprotein [Escherichia coli S88]
 gi|222034307|emb|CAP77048.1| lipoprotein yfiB [Escherichia coli LF82]
 gi|226899847|gb|EEH86106.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227834811|gb|EEJ45277.1| OmpA family protein [Escherichia coli 83972]
 gi|281179651|dbj|BAI55981.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294492477|gb|ADE91233.1| lipoprotein, OmpA family [Escherichia coli IHE3034]
 gi|300297822|gb|EFJ54207.1| OmpA family protein [Escherichia coli MS 185-1]
 gi|300305693|gb|EFJ60213.1| OmpA family protein [Escherichia coli MS 200-1]
 gi|300407877|gb|EFJ91415.1| OmpA family protein [Escherichia coli MS 45-1]
 gi|305854515|gb|EFM54953.1| putative outer membrane lipoprotein [Escherichia coli NC101]
 gi|307554618|gb|ADN47393.1| putative lipoprotein YfiB precursor [Escherichia coli ABU 83972]
 gi|307625845|gb|ADN70149.1| putative outer membrane lipoprotein [Escherichia coli UM146]
 gi|312947177|gb|ADR28004.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315284819|gb|EFU44264.1| OmpA family protein [Escherichia coli MS 110-3]
 gi|315290954|gb|EFU50319.1| OmpA family protein [Escherichia coli MS 153-1]
 gi|323951196|gb|EGB47072.1| OmpA family protein [Escherichia coli H252]
 gi|323957028|gb|EGB52754.1| OmpA family protein [Escherichia coli H263]
 gi|324005821|gb|EGB75040.1| OmpA family protein [Escherichia coli MS 57-2]
 gi|324012443|gb|EGB81662.1| OmpA family protein [Escherichia coli MS 60-1]
 gi|331053335|gb|EGI25364.1| YfiB [Escherichia coli TA206]
          Length = 160

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|87201146|ref|YP_498403.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
 gi|87136827|gb|ABD27569.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
          Length = 357

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S   PE   +L        +     I + G+ D        + N  LS  
Sbjct: 246 PYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADR---SGTVKYNQGLSER 302

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S    L   GV +  I+    F     ++ +        NRR++I 
Sbjct: 303 RNASVRSYLTTHGVPDGSITS-QAFGESNPRVPTADGVRELQNRRVEIT 350


>gi|84393843|ref|ZP_00992588.1| putative outer membrane protein [Vibrio splendidus 12B01]
 gi|84375538|gb|EAP92440.1| putative outer membrane protein [Vibrio splendidus 12B01]
          Length = 203

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 10/165 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRN 233
               +E  +     +++ DL    +  +           +    +    G  I   + R 
Sbjct: 20  SSQQEEAYIETPEAEQIADLQDDDNDGVVNARDTCPGTPEASQVDNDGCGETIRAEEVRQ 79

Query: 234 -TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F   S    P     +  + E L       I I+G+            N  LS  R
Sbjct: 80  LKILFAHDSFEVNPIFSDQISTMAEFLETYKSASIEIQGYASKV---GSNEYNLDLSKRR 136

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334
           A +    L+ +G+  +R+ +I G+   RL+   D    ++ NR++
Sbjct: 137 ANNVQDELLSNGIEPERV-RIVGYGEERLENEGDDATSHALNRKV 180


>gi|332967831|gb|EGK06930.1| OmpA family protein [Kingella kingae ATCC 23330]
          Length = 227

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F        PE +  L ++   +   + + + + GHTD   F    + N  LS  R
Sbjct: 90  SNFLFGFDKDKLRPEAVETLNQLVARVNGTNVQAVRVEGHTD---FMGAEQYNQALSERR 146

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319
           A +    L+  GV  +R+S + G    +
Sbjct: 147 ATAVANYLVSQGVPAERVSAV-GLGESQ 173


>gi|328473741|gb|EGF44576.1| hypothetical protein VP10329_13800 [Vibrio parahaemolyticus 10329]
          Length = 300

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   L+                   +            F   S+   P+
Sbjct: 118 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 177

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH D          N +L+ +RA    + L   GV+ 
Sbjct: 178 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVAS 234

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           DR+                       NRR+ I V    
Sbjct: 235 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 271


>gi|254506184|ref|ZP_05118328.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
 gi|219551002|gb|EED27983.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
          Length = 175

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++    +   +L      L+ +    +++ GH D          N  L   RA + 
Sbjct: 75  FAFDNATIAGDYEEMLAAHAAYLSKNPALKVTVEGHADER---GTPEYNIALGERRATAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174


>gi|221210024|ref|ZP_03583005.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD1]
 gi|221170712|gb|EEE03178.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
           CGD1]
          Length = 163

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +LQ     L       + I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GVS  ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVSASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161


>gi|149185364|ref|ZP_01863681.1| outer membrane protein [Erythrobacter sp. SD-21]
 gi|148831475|gb|EDL49909.1| outer membrane protein [Erythrobacter sp. SD-21]
          Length = 218

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 13/116 (11%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            F              L  I +          + RGH+D+        DN   S +RA +
Sbjct: 70  SFADGMPELTEAVRAELATIVDSPQMEAGGAIVLRGHSDSD---GSDEDNLEASRERAEA 126

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRIDILVEDRQ 342
                +++G+ E RI  +  F                ++   + NRR+++ +E  +
Sbjct: 127 VRDFFVENGIDEARI-TVIAFGEQNPLAPNALPDGSPNEEGRATNRRVEVTIETGR 181


>gi|585614|sp|P38368|OMP52_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
           Precursor
 gi|388301|gb|AAA03346.1| outer membrane protein P5 [Haemophilus influenzae]
 gi|301169904|emb|CBW29508.1| outer membrane protein A (3a;II*;G;d) [Haemophilus influenzae
           10810]
          Length = 353

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 322 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 353


>gi|330892287|gb|EGH24948.1| OmpA domain-containing protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 830

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|73853300|ref|YP_308796.1| OmpA-family lipoprotein [Escherichia coli]
 gi|73476884|gb|AAZ76499.1| OmpA-family lipoprotein [Escherichia coli]
          Length = 267

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              +F+  S     +    L++I    +   + + I G TD          N  LS  RA
Sbjct: 155 GDVLFNFDSWRLTDKANDELERIATKFSQVDD-VRIEGFTDPL---GSKEYNRILSEKRA 210

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA------NRRIDIL 337
            S  +  +  G   +RI   +G               +        NRR++I 
Sbjct: 211 ESVKEWFISRGFKAERIQA-TGRGADAPVALCPGMVGDGLKECLRPNRRVEIT 262


>gi|330874387|gb|EGH08536.1| OmpA domain-containing protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 830

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPSELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|261342034|ref|ZP_05969892.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315690|gb|EFC54628.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 161

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FDK+ +   PE+   ++ +   LA +      + GHTD          N  LSL R
Sbjct: 53  DKILFDKNDARLRPESETQIRTMASRLAATGLNHARMDGHTDNY---GEESYNEALSLKR 109

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A +      K            G        ++      + NRR+ +++
Sbjct: 110 ANAVADAWAKGANIPRGNLTTQGLGKKYPVASNSTPQGRAENRRVAVVI 158


>gi|254507991|ref|ZP_05120119.1| outer membrane protein [Vibrio parahaemolyticus 16]
 gi|219549099|gb|EED26096.1| outer membrane protein [Vibrio parahaemolyticus 16]
          Length = 278

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 13/198 (6%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           +G   C    + ++I K+            + A       +    ++   L   V     
Sbjct: 72  EGARWCFPAAVVQAIEKQNRIARELEGGLLLDAANDIVIQRKRLNELELQL-DYVTSQTK 130

Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                +       +++ID+    +     F  +SS   P+ +  L K   +LA      +
Sbjct: 131 CVPPMDEGAFHQRLAVIDELFNLLNVDNQFAFNSSEVNPKYMGHLAKAANMLAEHPSLNL 190

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + GH D+         N +L+L+RA    + L   G++  RI               + 
Sbjct: 191 KVTGHADSV---GDVAYNEKLALERAQQVKRYLSIFGLAPTRI-ATHSVGDTLPLHEGNS 246

Query: 327 MNSA--NRRIDILVEDRQ 342
                 NRR+ I V D Q
Sbjct: 247 EGVKLTNRRVSIEVIDTQ 264


>gi|15803127|ref|NP_289158.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
           EDL933]
 gi|15832722|ref|NP_311495.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
 gi|168752055|ref|ZP_02777077.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|168762397|ref|ZP_02787404.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|168773468|ref|ZP_02798475.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|168778583|ref|ZP_02803590.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|195940199|ref|ZP_03085581.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807469|ref|ZP_03249806.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208813697|ref|ZP_03255026.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208820246|ref|ZP_03260566.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209399323|ref|YP_002272076.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|217327416|ref|ZP_03443499.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254794551|ref|YP_003079388.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           TW14359]
 gi|12517027|gb|AAG57716.1|AE005490_11 putative outer membrane protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|13362939|dbj|BAB36891.1| putative outer membrane protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|187770670|gb|EDU34514.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|188014012|gb|EDU52134.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|189003592|gb|EDU72578.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|189367264|gb|EDU85680.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|208727270|gb|EDZ76871.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734974|gb|EDZ83661.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208740369|gb|EDZ88051.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209160723|gb|ACI38156.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|209762580|gb|ACI79602.1| putative outer membrane protein [Escherichia coli]
 gi|209762582|gb|ACI79603.1| putative outer membrane protein [Escherichia coli]
 gi|209762586|gb|ACI79605.1| putative outer membrane protein [Escherichia coli]
 gi|217319783|gb|EEC28208.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254593951|gb|ACT73312.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
           TW14359]
 gi|320188940|gb|EFW63599.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str.
           EC1212]
 gi|326344357|gb|EGD68115.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1125]
 gi|326347726|gb|EGD71443.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1044]
          Length = 160

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITPP 160


>gi|309244377|gb|ADO52193.1| OprL [Pseudomonas cichorii]
          Length = 156

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEALRSLDVHAKDLKANGARVVLEGNTDER---GTREYNIALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GVS  ++  +S +   R     +
Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150


>gi|301155739|emb|CBW15207.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
           parainfluenzae T3T1]
          Length = 156

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 47  LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 103

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 104 LGQRRADAVKGFLAGKGVDAGKVSTVS-YGEEKPAVLGHDEAAYSKNRR 151


>gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
 gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
          Length = 357

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D          N  LS
Sbjct: 229 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344

Query: 338 VED 340
           V+ 
Sbjct: 345 VKG 347


>gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
           influenzae F3047]
 gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
           influenzae F3047]
          Length = 348

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS  RA S     +  GV+ D IS  +G+      
Sbjct: 261 KSAKVAVAGYTDRI---GSDEFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348


>gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
           influenzae F3031]
 gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
           influenzae F3031]
          Length = 348

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS  RA S     +  GV+ D IS  +G+      
Sbjct: 261 KSAKVAVAGYTDRI---GSDEFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348


>gi|215487943|ref|YP_002330374.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266015|emb|CAS10427.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 160

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA        + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|16130526|ref|NP_417096.1| probable positive effector of YfiN activity, OM lipoprotein
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89109406|ref|AP_003186.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
           substr. W3110]
 gi|170082209|ref|YP_001731529.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238901765|ref|YP_002927561.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
 gi|254037681|ref|ZP_04871739.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
 gi|256024868|ref|ZP_05438733.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
 gi|300949000|ref|ZP_07163053.1| OmpA family protein [Escherichia coli MS 116-1]
 gi|300957389|ref|ZP_07169603.1| OmpA family protein [Escherichia coli MS 175-1]
 gi|301644047|ref|ZP_07244063.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|307139326|ref|ZP_07498682.1| putative outer membrane lipoprotein [Escherichia coli H736]
 gi|331643321|ref|ZP_08344452.1| YfiB [Escherichia coli H736]
 gi|140651|sp|P07021|YFIB_ECOLI RecName: Full=Putative lipoprotein yfiB; Flags: Precursor
 gi|1788957|gb|AAC75654.1| probable positive effector of YfiN activity, OM lipoprotein
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1800010|dbj|BAA16490.1| predicted outer membrane lipoprotein [Escherichia coli str. K12
           substr. W3110]
 gi|169890044|gb|ACB03751.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
           substr. DH10B]
 gi|226839305|gb|EEH71326.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
 gi|238862713|gb|ACR64711.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
 gi|260448321|gb|ACX38743.1| OmpA/MotB domain protein [Escherichia coli DH1]
 gi|300315824|gb|EFJ65608.1| OmpA family protein [Escherichia coli MS 175-1]
 gi|300451527|gb|EFK15147.1| OmpA family protein [Escherichia coli MS 116-1]
 gi|301077592|gb|EFK92398.1| OmpA family protein [Escherichia coli MS 146-1]
 gi|309702985|emb|CBJ02316.1| outer membrane lipoprotein [Escherichia coli ETEC H10407]
 gi|315137223|dbj|BAJ44382.1| putative outer membrane lipoprotein [Escherichia coli DH1]
 gi|331036792|gb|EGI09016.1| YfiB [Escherichia coli H736]
          Length = 160

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|298484732|ref|ZP_07002834.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298160765|gb|EFI01784.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 830

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|24113943|ref|NP_708453.1| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
 gi|30064004|ref|NP_838175.1| putative outer membrane lipoprotein [Shigella flexneri 2a str.
           2457T]
 gi|74313195|ref|YP_311614.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
 gi|82545149|ref|YP_409096.1| outer membrane lipoprotein [Shigella boydii Sb227]
 gi|218706106|ref|YP_002413625.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
 gi|293406112|ref|ZP_06650038.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
 gi|293411994|ref|ZP_06654717.1| outer membrane lipoprotein [Escherichia coli B354]
 gi|298381845|ref|ZP_06991442.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
 gi|300900209|ref|ZP_07118397.1| OmpA family protein [Escherichia coli MS 198-1]
 gi|331684261|ref|ZP_08384853.1| YfiB [Escherichia coli H299]
 gi|24053050|gb|AAN44160.1| putative outer membrane protein [Shigella flexneri 2a str. 301]
 gi|30042260|gb|AAP17985.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
 gi|73856672|gb|AAZ89379.1| putative outer membrane protein [Shigella sonnei Ss046]
 gi|81246560|gb|ABB67268.1| putative outer membrane protein [Shigella boydii Sb227]
 gi|218433203|emb|CAR14101.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
 gi|291426118|gb|EFE99150.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
 gi|291468765|gb|EFF11256.1| outer membrane lipoprotein [Escherichia coli B354]
 gi|298276985|gb|EFI18501.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
 gi|300356266|gb|EFJ72136.1| OmpA family protein [Escherichia coli MS 198-1]
 gi|313648283|gb|EFS12727.1| ompA family protein [Shigella flexneri 2a str. 2457T]
 gi|331077876|gb|EGI49082.1| YfiB [Escherichia coli H299]
 gi|333000977|gb|EGK20547.1| ompA family protein [Shigella flexneri K-272]
          Length = 160

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|296410010|gb|ADH15781.1| OmpP6 [Haemophilus haemolyticus]
          Length = 149

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 41  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++  +S +   +  +      +   NRR
Sbjct: 98  LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 145


>gi|197106106|ref|YP_002131483.1| OmpA family protein [Phenylobacterium zucineum HLK1]
 gi|196479526|gb|ACG79054.1| OmpA family protein [Phenylobacterium zucineum HLK1]
          Length = 178

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S +   E   VLQ     L  +      I G+ D          N  L   R
Sbjct: 68  ERVYFALDSDLLDAEARSVLQLQAAWLQRNPTVRARIEGNADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
           A +A Q L++SGV   R+  IS +   R           + NR
Sbjct: 125 AQAARQFLIRSGVDSTRLETIS-YGKERPIDPGSTEEAWARNR 166


>gi|323495160|ref|ZP_08100245.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
           20546]
 gi|323310600|gb|EGA63779.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
           20546]
          Length = 175

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 75  FAFDNSTIAGDYEEMLAAHAAYLSKNPALNVTIEGHADER---GTPEYNIALGERRATAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174


>gi|305431690|ref|ZP_07400859.1| chemotaxis protein MotB [Campylobacter coli JV20]
 gi|304445285|gb|EFM37929.1| chemotaxis protein MotB [Campylobacter coli JV20]
          Length = 316

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 98/330 (29%), Gaps = 52/330 (15%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
            +       W I YAD M  L+  F+++                            +  +
Sbjct: 2   KNEQEEGNFW-IAYADLMAGLLFVFILLI--------------------------GAIVV 34

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEH 142
                  +           +  + ++  +L+       K    L N    L+    Q   
Sbjct: 35  KYVLTQSDLREIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKAE 94

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---I 199
            + ++T   +  K+L  S D +          L    +E     +   + ++  +    I
Sbjct: 95  LEANITNYEQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLI 154

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ------ 253
              LS  +   +   +  +     I +      +  +FDK S     E    L+      
Sbjct: 155 RENLSKELQAKLDSNITIDQKTGSISL-----PSEVLFDKDSYTLKNEAKASLRKILSEY 209

Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK--SGVSED 307
                    +  + E I I GHTD+         N  LS  RAY     +      +   
Sbjct: 210 FNAIINDPKILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKDIRLQ 266

Query: 308 RISKISGFAHHRLKIASDPMN-SANRRIDI 336
           ++   SG +     + +   +   +RRI+I
Sbjct: 267 KLLMASGRSFSDPVLVNGVEDKDKSRRIEI 296


>gi|157158147|ref|YP_001463924.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
 gi|157162081|ref|YP_001459399.1| putative outer membrane lipoprotein [Escherichia coli HS]
 gi|170019118|ref|YP_001724072.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
 gi|188495277|ref|ZP_03002547.1| OmpA family protein [Escherichia coli 53638]
 gi|194430167|ref|ZP_03062668.1| OmpA family protein [Escherichia coli B171]
 gi|209920080|ref|YP_002294164.1| putative outer membrane lipoprotein [Escherichia coli SE11]
 gi|218555184|ref|YP_002388097.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
 gi|218696229|ref|YP_002403896.1| putative outer membrane lipoprotein [Escherichia coli 55989]
 gi|253772501|ref|YP_003035332.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162575|ref|YP_003045683.1| putative outer membrane lipoprotein [Escherichia coli B str.
           REL606]
 gi|260845286|ref|YP_003223064.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
 gi|260856694|ref|YP_003230585.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
           11368]
 gi|261227488|ref|ZP_05941769.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255682|ref|ZP_05948215.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283877|ref|YP_003500695.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|293415876|ref|ZP_06658516.1| lipoprotein yfiB [Escherichia coli B185]
 gi|293448955|ref|ZP_06663376.1| lipoprotein yfiB [Escherichia coli B088]
 gi|297517107|ref|ZP_06935493.1| putative outer membrane lipoprotein [Escherichia coli OP50]
 gi|300819922|ref|ZP_07100105.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|300825119|ref|ZP_07105212.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|300905075|ref|ZP_07122884.1| OmpA family protein [Escherichia coli MS 84-1]
 gi|300921149|ref|ZP_07137528.1| OmpA family protein [Escherichia coli MS 115-1]
 gi|300925597|ref|ZP_07141467.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|300930670|ref|ZP_07146056.1| OmpA family protein [Escherichia coli MS 187-1]
 gi|301305750|ref|ZP_07211837.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|301326724|ref|ZP_07220038.1| OmpA family protein [Escherichia coli MS 78-1]
 gi|307315083|ref|ZP_07594667.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|309794116|ref|ZP_07688540.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|331654062|ref|ZP_08355062.1| YfiB [Escherichia coli M718]
 gi|331669355|ref|ZP_08370201.1| YfiB [Escherichia coli TA271]
 gi|331678596|ref|ZP_08379270.1| YfiB [Escherichia coli H591]
 gi|157067761|gb|ABV07016.1| OmpA family protein [Escherichia coli HS]
 gi|157080177|gb|ABV19885.1| OmpA family protein [Escherichia coli E24377A]
 gi|169754046|gb|ACA76745.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
 gi|188490476|gb|EDU65579.1| OmpA family protein [Escherichia coli 53638]
 gi|194411792|gb|EDX28113.1| OmpA family protein [Escherichia coli B171]
 gi|209762578|gb|ACI79601.1| putative outer membrane protein [Escherichia coli]
 gi|209762584|gb|ACI79604.1| putative outer membrane protein [Escherichia coli]
 gi|209913339|dbj|BAG78413.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218352961|emb|CAU98761.1| putative outer membrane lipoprotein [Escherichia coli 55989]
 gi|218361952|emb|CAQ99553.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
 gi|242378200|emb|CAQ32975.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
 gi|253323545|gb|ACT28147.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974476|gb|ACT40147.1| predicted outer membrane lipoprotein [Escherichia coli B str.
           REL606]
 gi|253978643|gb|ACT44313.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
 gi|257755343|dbj|BAI26845.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
           11368]
 gi|257760433|dbj|BAI31930.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
           12009]
 gi|290763750|gb|ADD57711.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|291322045|gb|EFE61474.1| lipoprotein yfiB [Escherichia coli B088]
 gi|291432065|gb|EFF05047.1| lipoprotein yfiB [Escherichia coli B185]
 gi|300403026|gb|EFJ86564.1| OmpA family protein [Escherichia coli MS 84-1]
 gi|300411899|gb|EFJ95209.1| OmpA family protein [Escherichia coli MS 115-1]
 gi|300418292|gb|EFK01603.1| OmpA family protein [Escherichia coli MS 182-1]
 gi|300461467|gb|EFK24960.1| OmpA family protein [Escherichia coli MS 187-1]
 gi|300522391|gb|EFK43460.1| OmpA family protein [Escherichia coli MS 119-7]
 gi|300527510|gb|EFK48572.1| OmpA family protein [Escherichia coli MS 107-1]
 gi|300839004|gb|EFK66764.1| OmpA family protein [Escherichia coli MS 124-1]
 gi|300846584|gb|EFK74344.1| OmpA family protein [Escherichia coli MS 78-1]
 gi|306905512|gb|EFN36046.1| OmpA/MotB domain protein [Escherichia coli W]
 gi|308122021|gb|EFO59283.1| OmpA family protein [Escherichia coli MS 145-7]
 gi|315061919|gb|ADT76246.1| predicted outer membrane lipoprotein [Escherichia coli W]
 gi|320198378|gb|EFW72980.1| Integral membrane protein YfiB [Escherichia coli EC4100B]
 gi|320640787|gb|EFX10285.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           G5101]
 gi|320646132|gb|EFX15077.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
           493-89]
 gi|320651429|gb|EFX19830.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
           H 2687]
 gi|320657034|gb|EFX24857.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662698|gb|EFX30042.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667515|gb|EFX34439.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323156259|gb|EFZ42418.1| ompA family protein [Escherichia coli EPECa14]
 gi|323173078|gb|EFZ58709.1| ompA family protein [Escherichia coli LT-68]
 gi|323377501|gb|ADX49769.1| OmpA/MotB domain protein [Escherichia coli KO11]
 gi|323960537|gb|EGB56166.1| OmpA family protein [Escherichia coli H489]
 gi|323971452|gb|EGB66688.1| OmpA family protein [Escherichia coli TA007]
 gi|324016591|gb|EGB85810.1| OmpA family protein [Escherichia coli MS 117-3]
 gi|324120062|gb|EGC13938.1| OmpA family protein [Escherichia coli E1167]
 gi|331047444|gb|EGI19521.1| YfiB [Escherichia coli M718]
 gi|331063023|gb|EGI34936.1| YfiB [Escherichia coli TA271]
 gi|331073426|gb|EGI44747.1| YfiB [Escherichia coli H591]
          Length = 160

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10]
 gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str.
           91001]
 gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10]
 gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar
           Microtus str. 91001]
          Length = 363

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D          N  LS
Sbjct: 235 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 291

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 292 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 350

Query: 338 VED 340
           V+ 
Sbjct: 351 VKG 353


>gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 661

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 34/138 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +D   +   PE+   L  + ++L  +    I +  HTD    +     N RLS  R
Sbjct: 522 ENIFYDFDKATLRPESKEELDGLIDLLNLNPNVTIELSAHTDR---KGSDEYNNRLSQRR 578

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------------------------- 324
           A S    L+  G+++DR++ + G    + K  +                           
Sbjct: 579 AESVVNYLITHGIAKDRLTAV-GKGKAQPKNVTKAVVKKYDFLKEGEVLTEQFIQELPPE 637

Query: 325 --DPMNSANRRIDILVED 340
             D  +  NRR +  V  
Sbjct: 638 QQDMADQVNRRTEFRVLS 655


>gi|255034413|ref|YP_003085034.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254947169|gb|ACT91869.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 248

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 71/232 (30%), Gaps = 7/232 (3%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           S  ++  S       QR   +I  L            +   +  G+ +    +      +
Sbjct: 19  SQPVQANSKAAGSLRQRSRVSIRVLDKFSLRPVRATIMLVGNHPGRQVAPRFENGIYQFR 78

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                   +S          + +       +        +N  +          I +   
Sbjct: 79  MSAGDTSVISIHASGYEMLSEAVAGRDLHATKIFYLTPIENSTERAREPVIEQNIPVLED 138

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D R T  F +S S  LPE+   L+ +   L  +    I + GHTD          N  LS
Sbjct: 139 DIRATLHFPQSESDILPESGYELEILAGYLVRNAGSRIELMGHTDDV---GDPFKNLLLS 195

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
            DR     + L+   +   RI +  GF        +D       NRR++I +
Sbjct: 196 FDRVDEVRKYLVSKHIETTRI-RGKGFGSDLPVAPNDCEANRRLNRRVEIRI 246


>gi|331664170|ref|ZP_08365079.1| YfiB [Escherichia coli TA143]
 gi|331058627|gb|EGI30605.1| YfiB [Escherichia coli TA143]
          Length = 160

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAVKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGKIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|300940943|ref|ZP_07155467.1| OmpA family protein [Escherichia coli MS 21-1]
 gi|300454267|gb|EFK17760.1| OmpA family protein [Escherichia coli MS 21-1]
          Length = 160

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|194333586|ref|YP_002015446.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311404|gb|ACF45799.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
           DSM 271]
          Length = 169

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 7/119 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           +            F   S+         L++  E +     V   I GH D         
Sbjct: 55  LRDEARLALKDVFFSFESADLDILATTQLKRNAEWMIAHPSVSVIIEGHCDER---GTGE 111

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
            N  L   RA  +   L+K+GV+  RI  +S +   R   A   D   + NRR   +VE
Sbjct: 112 FNMALGERRADISKSFLVKAGVASSRIQTVS-YGEERPFEAGHDDSAWAKNRRAHFVVE 169


>gi|160872189|ref|ZP_02062321.1| OmpA/MotB domain protein [Rickettsiella grylli]
 gi|159120988|gb|EDP46326.1| OmpA/MotB domain protein [Rickettsiella grylli]
          Length = 175

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S    E    LQ     L    +    I G+TD          N  L   RA S 
Sbjct: 66  FDFNQSFVREEDKPSLQIQAHYLISHPQTKILIVGNTDER---GSREYNIGLGQRRALSV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            + L+ +GVS+ +I  +S +   +           + NRR D+
Sbjct: 123 ERFLIANGVSKKQILTVS-YGAEKPVAFGHSEADYAKNRRADL 164


>gi|119502996|ref|ZP_01625081.1| conserved hypothetical OmpA family protein [marine gamma
           proteobacterium HTCC2080]
 gi|119461342|gb|EAW42432.1| conserved hypothetical OmpA family protein [marine gamma
           proteobacterium HTCC2080]
          Length = 297

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 9/167 (5%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                    ++ L +    ++   + L   N    ++ E  +    +++   +   +F  
Sbjct: 123 AAADELQVTEQALLNTQADLALAYTELDKVNADLEIVQEEQQRFAKLALEQLQLEMLFKT 182

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           + S         L  +   L  +    + I G+ D       +  N  LSL RA    Q 
Sbjct: 183 NDSRLTAGGEDRLSLLASFLTRNENLSVRIEGYADPR---GDSASNMALSLARAERVAQQ 239

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQG 343
           L+ SGV+ +R+  +S     +           + +RR+ I +   QG
Sbjct: 240 LIDSGVAANRM-TVSAHGESQALAGDGDIDAYALDRRVHIAL--DQG 283


>gi|77460739|ref|YP_350246.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77384742|gb|ABA76255.1| putative exported flagellar protein [Pseudomonas fluorescens Pf0-1]
          Length = 302

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              LQ + E +     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGEGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDN---SGNRLTNRELSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
                  +G+ E +I  +         +   +    + NRR+++ +  
Sbjct: 235 VVDFFKANGIQESQI-TVRFHGERYPLVPNTNAANRAKNRRVNVHLAR 281


>gi|83954367|ref|ZP_00963087.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841404|gb|EAP80574.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 665

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 15/274 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
                  G  +++ S      ++P       K D ++                + +    
Sbjct: 389 VGSILNNGSKVVSNSGDRLVVEDPNGDLRVLKDDDALVRQAGDEVRRETFNDGSSRTTVI 448

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           +   +       +     +            L   T +E+ I   E   + P +      
Sbjct: 449 KPNGSKIVTILGRDGTVLRRINVDPQGNEYVLFDDTQVEERIVVNELPQVRPQANTLASQ 508

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +     L  ++    +   +   V+ V         +     + +   F   S+   
Sbjct: 509 QNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAPEI-----ELDAVRFATGSAAIQ 563

Query: 246 PETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           PE    L KIG  ++         VI + GHTDA         N  LS  RA +    L 
Sbjct: 564 PEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAG---YNLALSDRRAETVALALT 620

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           +   V    +    G+    LK+ ++    ANRR
Sbjct: 621 EYFDVPPANLIT-QGYGESALKVPTETAEPANRR 653


>gi|332291441|ref|YP_004430050.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169527|gb|AEE18782.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 649

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 13/118 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD   S   P+  + L+K+  V+       I +R HTD+         N +LS  R
Sbjct: 536 NPIYFDFDKSNIRPDASLELEKVIAVMQQYPALKIDVRSHTDSR---APDAYNMKLSQRR 592

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341
             S  + +++  G+   R+    G+   +L  A       ++  +  NRR + ++  +
Sbjct: 593 NVSTIRYIVQQGGIEAYRL-TGRGYGETQLTNACANGIECTEEEHQLNRRSEFIIMAK 649


>gi|218549686|ref|YP_002383477.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           fergusonii ATCC 35469]
 gi|218357227|emb|CAQ89862.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           fergusonii ATCC 35469]
 gi|324114316|gb|EGC08285.1| peptidoglycan lipoprotein [Escherichia fergusonii B253]
 gi|325498076|gb|EGC95935.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           fergusonii ECD227]
          Length = 173

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|302187242|ref|ZP_07263915.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 386

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      S+               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSDSADAGTAAKAPAPSPAPAPVAKAAATPAPAAGAENSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  S   K     D    K    +   +   + +  +     S +         
Sbjct: 80  WYWPFGSSDSAQAKPDAVADKPAAKPAAPAMVAKSETDSKWWWPFGNDSAKDEPKALPMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283


>gi|320533459|ref|ZP_08034136.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134317|gb|EFW26588.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 490

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKI 322
             ++I GHTD          N  LS  RA +    L   +G+ +     ++G      ++
Sbjct: 213 GTLTIVGHTDDVQ---DDAYNQALSEKRANTVKTRLGQLTGLDKWN-PSVAGKGESEPRV 268

Query: 323 A--SDPMNSANRRIDILVEDRQG 343
           +  +D   +ANRR++I +    G
Sbjct: 269 SGTTDEARAANRRVEITLTPTGG 291


>gi|261252511|ref|ZP_05945084.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           orientalis CIP 102891]
 gi|260935902|gb|EEX91891.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           orientalis CIP 102891]
          Length = 176

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 76  FAFDNSTIAGDYEEMLAAHAAYLSKNPALEVTIEGHADER---GTPEYNIALGERRANAV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 133 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 175


>gi|84388530|ref|ZP_00991077.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
 gi|84377079|gb|EAP93950.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
          Length = 180

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+++ ++  +I GH D          N  L   RA + 
Sbjct: 80  FAFDNSTIAGDYEEILAAHAAYLSNNVDMNVTIEGHADER---GTPEYNIALGERRAQAV 136

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179


>gi|296280733|gb|ADH04664.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       +R     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDLCPDTPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|269965412|ref|ZP_06179532.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269830058|gb|EEZ84287.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 339

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 8/116 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
           +     F+             L+ +   ++       I I GHTD       +  N  +S
Sbjct: 205 RDMALSFEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNV---GSSLTNLSVS 261

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             RA      L++ GV E  + +           +++     + NRR+ + +    
Sbjct: 262 RTRAEQVTNALIELGVDES-MIETRAHGSRYPIASNNSVNGQAKNRRVTLRLVRDN 316


>gi|167855024|ref|ZP_02477798.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
 gi|167853872|gb|EDS25112.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
          Length = 153

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  FD  S     E   +L    + L  S   +++ GH D          N  L
Sbjct: 47  LQTRYNTVYFDFDSYTVKAEDQQLLDAHAQYLVASKGKVTVAGHADER---GTPEYNIAL 103

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L   G     ++ +S +   +  +        S NRR
Sbjct: 104 GQRRADAVKDFLATKG--ASNVATVS-YGEEKPAVLGHSEADYSKNRR 148


>gi|187736002|ref|YP_001878114.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187426054|gb|ACD05333.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 478

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 27/302 (8%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID---LSIDEHITKNSVDLKIGSTNQK 121
           I   +   G ++  A     D +  PE+      D     + E + K  ++       + 
Sbjct: 60  IVLSWFDLGIHVHKAPTVQEDRKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPEL 119

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              + +      ++  + S           E         D+            P + K 
Sbjct: 120 PDLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVDMNAVAKGLPEPSPPEMLKS 179

Query: 182 KILA---MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--- 235
                     +  + +  +  ++ L G    +         + + ++      +++    
Sbjct: 180 SASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSR 239

Query: 236 -----MFDKSSSIPLPETI-VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                +F+ + ++        +LQ  G ++ +   +  + GHTD+         N  LSL
Sbjct: 240 LGADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSF---GSEEYNAVLSL 296

Query: 290 DRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKIA---SDPMNSANRRIDILVEDR 341
            RA +  Q L  +G++  R        I      R  ++        +ANRR++I    +
Sbjct: 297 MRANAVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEIH-MRK 355

Query: 342 QG 343
            G
Sbjct: 356 PG 357


>gi|91223208|ref|ZP_01258474.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           alginolyticus 12G01]
 gi|91192021|gb|EAS78284.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           alginolyticus 12G01]
          Length = 313

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 8/116 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
           +     F+             L+ +   ++       I I GHTD       +  N  +S
Sbjct: 179 RDMALSFEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNV---GSSLTNLSVS 235

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             RA      L++ GV E  + +           +++     + NRR+ + +    
Sbjct: 236 RTRAEQVTNALIELGVDES-MIETRAHGSRYPIASNNSVNGQAKNRRVTLRLVRDN 290


>gi|296410008|gb|ADH15780.1| OmpP6 [Haemophilus influenzae]
          Length = 136

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                  ++       +T     +  +  + NT  F         E + +L      L  
Sbjct: 4   AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 63

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +    + + G+TD          N  L   RA +    L   GV   ++  +S +   + 
Sbjct: 64  TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 119

Query: 321 KIASDPMNS--ANRR 333
            +      +   NRR
Sbjct: 120 AVLGHDEAAYSKNRR 134


>gi|219870352|ref|YP_002474727.1| 18K peptidoglycan-associated outer membrane lipoprotein PalA
           [Haemophilus parasuis SH0165]
 gi|219690556|gb|ACL31779.1| 18K peptidoglycan-associated outer membrane lipoprotein, precursor
           PalA [Haemophilus parasuis SH0165]
          Length = 153

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +  + NT  FD  S     E   +L    + L  S   +++ GH D          N  L
Sbjct: 47  LQTRYNTVYFDFDSYTLKAEDQQLLDAHAQYLVASKGKVTVAGHADER---GTPEYNIAL 103

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              RA +    L   G     ++ +S +   +  +        S NRR
Sbjct: 104 GQRRADAVKDFLATKG--ASNVATVS-YGEEKPAVLGHSEADYSKNRR 148


>gi|187233929|gb|ACD01211.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus]
          Length = 174

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 74  FAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER---GTPEYNIALGERRAQAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D+IS +S +   +  +        + NRR  ++
Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173


>gi|330871941|gb|EGH06090.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 666

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 415 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 474

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 475 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 534

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEV--ISIRGHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I I GH D  
Sbjct: 535 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQL 594

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 595 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 650

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 651 CLEPNRRVEIEVRA 664


>gi|241764618|ref|ZP_04762633.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
 gi|241365939|gb|EER60569.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
          Length = 178

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             FD  S +  PE   +++     +  S+    +  GHTD          N  L   RA 
Sbjct: 75  VYFDYDSYVIKPEFQSLIEAHARFIKSSSNRKVVVEGHTDER---GGREYNLALGQKRAE 131

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           +  + L   GV + ++  +S F   +L +    + +++ NRR ++
Sbjct: 132 AVRRSLGLLGVPDSQVEAVS-FGKEKLAVQGTGEDVHAQNRRAEL 175


>gi|42768700|gb|AAS45565.1| putative outer membrane protein [Aeromonas hydrophila]
          Length = 344

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +F         E +  L  + + +           + G+TD          N +LS
Sbjct: 220 NSDVLFAFGKDSLKSEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDDYNQKLS 276

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337
             RA +    L+  G++  ++  + G         +               + +RR+++ 
Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRVEVR 335

Query: 338 VEDRQ 342
           V   Q
Sbjct: 336 VSGVQ 340


>gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum]
          Length = 367

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + +    E    L ++   L+        + + G +D        + N  LS
Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFSDRL---GSEQYNQALS 289

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----AS-------DPMN------SAN 331
             RA S    L+  G+  +++S   G    +        +                 + +
Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVYKQGRAATKAQLIDCLAPD 348

Query: 332 RRIDILVED 340
           RR++I V+ 
Sbjct: 349 RRVEIEVKG 357


>gi|78485244|ref|YP_391169.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78363530|gb|ABB41495.1| Tol system Pal protein [Thiomicrospira crunogena XCL-2]
          Length = 205

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    I    ++  ++    +L  +  E I + GHTD          N  L   RA + 
Sbjct: 104 FDYDQYIVDDTSLETVKHYATILIDNPSEKIQLVGHTDER---GTPEYNLALGEKRAKAV 160

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            +  M  GV +DRI ++         +   ++   + NRR++I
Sbjct: 161 AEAFMLYGVHKDRI-EVISLGEELPVMEGHNEEAWAKNRRVEI 202


>gi|317049504|ref|YP_004117152.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
 gi|316951121|gb|ADU70596.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
          Length = 157

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + S   PE+   + ++   LA +  E + I GHTD          N +LSL R
Sbjct: 49  DKILFGINESELTPESKTTINRMATNLAATGIEHLRIDGHTDNY---GTDSYNEQLSLKR 105

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A +      +         +  G        +++     + NRR+ +++   
Sbjct: 106 ANAVAAQWAEGASLPRSNIETRGLGKKYPVTSNNSAQGRAQNRRVAVVITAP 157


>gi|86151560|ref|ZP_01069774.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|121613602|ref|YP_001000300.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005251|ref|ZP_02271009.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315124117|ref|YP_004066121.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841189|gb|EAQ58437.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|87250368|gb|EAQ73326.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315017839|gb|ADT65932.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 317

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK---KISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGFIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|332293580|ref|YP_004432189.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171666|gb|AEE20921.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 368

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 87/293 (29%), Gaps = 20/293 (6%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              + I   +       + ++ G      P   S+  +       +             +
Sbjct: 79  KRLRVIPATYKTETVTYVKSTSGSSLRIVPASFSNDTETIEVKSAYAQWELGAPAPDCAS 138

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
                 R     +    ++ +   K +L  D+        S +   ++   +        
Sbjct: 139 SNPDDCRYW--CYKGYPAEYTTVSKRTLASDATVQSTPGGSANGTYTVRVIDQPASVVEE 196

Query: 180 KEKILAMK-----RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           +              K      + +++T   +  + + +     T R      +  Q   
Sbjct: 197 EIPAEFATITKTVMVKDATTTEEVVAATFDTVSKEVLKQKGGLTTWREVECALVEYQALP 256

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
             ++ +S+   P    ++      L   +    + I  HTD+      +  N  LS  RA
Sbjct: 257 INWNTNSATLTPAAKSIIDTRLMPLLAQNPGVKLEIASHTDSR---GASSSNQDLSERRA 313

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            S    L+  GV+   +   +GF   +LK         ++  ++ NRR +  +
Sbjct: 314 QSVANYLISKGVNNSLLVA-NGFGERKLKNRCADGVSCTERQHADNRRTEFRL 365


>gi|330815667|ref|YP_004359372.1| OmpA domain protein [Burkholderia gladioli BSR3]
 gi|327368060|gb|AEA59416.1| OmpA domain protein [Burkholderia gladioli BSR3]
          Length = 171

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236
               LA+     L      +          N ++     T    + +  ++  N+P+   
Sbjct: 6   ARLALAVMMISALAACKSGVKLDDKANQQGNALQTQPNPTDVAQVNVDPLNDPNSPLAKR 65

Query: 237 ---FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD  S     +   +L +  + L       I I+G+TD       +  N  L   RA
Sbjct: 66  SIYFDFDSYSVSDQYQSLLAQHAQYLKSHPARHILIQGNTDER---GTSEYNLALGQKRA 122

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
            +  + L   GV + ++  +S     +       +   + NRR DI+
Sbjct: 123 EAVRRGLSLLGVPDSQMESVS-LGKEKPQALGHDEASWAQNRRADIV 168


>gi|296273863|ref|YP_003656494.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296098037|gb|ADG93987.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 180

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
            +  F         +   V       L   +  + I G+ D          N+ L L RA
Sbjct: 75  ESIYFGFDKFKLTEDQRKVASDNASKLKGLSGSVKIEGNCDEW---GTDEYNYALGLKRA 131

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 L+  G++ + IS +S F       +       + NRR +
Sbjct: 132 KVVKDALVSDGIASNSISIVS-FGESNPVCSEKTKECWAKNRRAE 175


>gi|77465487|ref|YP_354990.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389905|gb|ABA81089.1| Possible outer membrane protein, OmpA family [Rhodobacter
           sphaeroides 2.4.1]
          Length = 453

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 8/130 (6%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDAS 275
                + I  +   +  +F  + +    +   ++  +  VLA +      + + GHTD  
Sbjct: 324 REDAQLTILTLQGTDPELFRSARAEVNADYAPLVASVAAVLAENRELVGAVRVIGHTDNV 383

Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331
           P    N    N  LS  RA +   +L++ GV    I    G A       +      + N
Sbjct: 384 PVQRSNPFASNQGLSEARAATLAALLVEGGVPAG-IVTAEGHADSEPVADNATRAGRAQN 442

Query: 332 RRIDILVEDR 341
           RR++I +E R
Sbjct: 443 RRVEIRIEKR 452


>gi|66048188|ref|YP_238029.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63258895|gb|AAY39991.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 830

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  I G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAI-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|261211899|ref|ZP_05926186.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
           RC341]
 gi|260839249|gb|EEX65881.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
           RC341]
          Length = 172

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    +++ GH D          N  L  
Sbjct: 66  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTVEGHADER---GTPEYNIALGE 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   +IS +S +   +  +        + NRR  ++
Sbjct: 123 RRAQAVSKYLEALGVQAGQISIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171


>gi|327313465|ref|YP_004328902.1| OmpA family protein [Prevotella denticola F0289]
 gi|326946064|gb|AEA21949.1| OmpA family protein [Prevotella denticola F0289]
          Length = 697

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 34/138 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D   +   PE+   L ++ ++L  +    I +  HTD   +   A  N RLS  R
Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325
           A +    L   G+  DR++ + G+   R                 +D             
Sbjct: 586 ADAVVAYLTSHGIVRDRLTPV-GYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKE 644

Query: 326 ---PMNSANRRIDILVED 340
                N  NRR +  V  
Sbjct: 645 KQEIANQLNRRTEFTVLR 662


>gi|71906334|ref|YP_283921.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71845955|gb|AAZ45451.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 165

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  +     E   +LQ+  E+L    +  +S+ G+TD       +  N  L   RA + 
Sbjct: 62  FDYDNFTIKTEYNALLQQQAELLKRYPKLGVSLEGNTDER---GSSEYNLSLGQKRAEAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
            + L   GV E ++  +S F   + K     +   S NRR+D 
Sbjct: 119 RKALTILGVPEAKVEAVS-FGKEKPKADCPEEKCWSQNRRVDF 160


>gi|88597019|ref|ZP_01100255.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562250|ref|YP_002344029.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|88190708|gb|EAQ94681.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359956|emb|CAL34745.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925860|gb|ADC28212.1| putative OmpA family membrane protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315928819|gb|EFV08086.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305]
          Length = 317

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +       I  I      +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDE-----KIGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|156976391|ref|YP_001447297.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
 gi|156527985|gb|ABU73070.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
          Length = 301

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 85/292 (29%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               +      I +   P  +     ++    +++    +    +D+ I      +    
Sbjct: 34  FADVNVSKF-LISECLAPQREIHFAVAEHFDFDKSFIREADAVSLDVFIRNIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K   +    N        +S         D E+     K     + +   ++ 
Sbjct: 93  IVGHTDFKGSDE---YNDKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGESQPLALGKSD 149

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                ++   +  +  ++ +++           +   +                      
Sbjct: 150 QDRAENRRAYVMFEEAQKYEEMPFCEPPKPERKIYMAMTPH------------------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD   S   PE +  L      L      I + GHTD          N +L+  RA 
Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEQLAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
           +    L K+ +   +   ++  F   +  I  +     + NRR  I+ ++ +
Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295


>gi|86153447|ref|ZP_01071651.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843173|gb|EAQ60384.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 317

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 100/323 (30%), Gaps = 56/323 (17%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK---KISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGFIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL----MKSGVSEDRISKISG 314
           +  + E I I GHTD+         N  LS  RAY     +      + +   ++   SG
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSNKL--QKLLMASG 274

Query: 315 FAHHRLKIASDPMN-SANRRIDI 336
            +       +   +   +RRI+I
Sbjct: 275 RSFSDPVFVNGVEDKDKSRRIEI 297


>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
 gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
          Length = 358

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D          N  LS
Sbjct: 230 KSDVLFAFNKATLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASDPMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G                P  +       +RR++I 
Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGSTCATVKPRAALIECLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|209520168|ref|ZP_03268940.1| OmpA/MotB domain protein [Burkholderia sp. H160]
 gi|209499375|gb|EDZ99458.1| OmpA/MotB domain protein [Burkholderia sp. H160]
          Length = 116

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+I        L +   V         +I G+TD++        N +LS  RA S 
Sbjct: 9   FATDSAILSSAAKASLDQFLRVNEGINFRRVTIIGYTDST---GSRGHNQKLSEARAQSV 65

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
            + L   G+         G A      ++        NRR+++ V   
Sbjct: 66  LRYLRDHGLIAQSFVA-EGAAADDPVASNATAEGRALNRRVEVRVVAS 112


>gi|328468979|gb|EGF39939.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
          Length = 206

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           ++               ++   LQD           L         +        + +  
Sbjct: 17  QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288
             +   +F   S    P     ++++ E L       I ++G+   +     ++ N  LS
Sbjct: 77  KMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYASKT---GDSKHNQDLS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             RA +    L+  G+  +R+ +I GF    L         ++ NRR+   V   +G
Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189


>gi|317009174|gb|ADU79754.1| flagellar motor protein MotB [Helicobacter pylori India7]
          Length = 257

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|58617307|ref|YP_196506.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
           ruminantium str. Gardel]
 gi|58416919|emb|CAI28032.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
           ruminantium str. Gardel]
          Length = 216

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   ++      V+L+K+ +      T  I I GHTD          N  L   R
Sbjct: 43  DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTR---GTDEYNLALGEQR 99

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340
           A +    ++    S ++   +             +++P       + NRR+ I + +
Sbjct: 100 ANAVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVN 156


>gi|57239289|ref|YP_180425.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58579253|ref|YP_197465.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
           ruminantium str. Welgevonden]
 gi|57161368|emb|CAH58291.1| hypothetical protein Erum5620 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417879|emb|CAI27083.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 217

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD   ++      V+L+K+ +      T  I I GHTD          N  L   R
Sbjct: 43  DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTR---GTDEYNLALGEQR 99

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340
           A +    ++    S ++   +             +++P       + NRR+ I + +
Sbjct: 100 ANAVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVN 156


>gi|57238205|ref|YP_178714.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
 gi|86149924|ref|ZP_01068153.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|148925958|ref|ZP_01809645.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|283956011|ref|ZP_06373500.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|57167009|gb|AAW35788.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
 gi|85839742|gb|EAQ57002.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|145844944|gb|EDK22048.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|283792487|gb|EFC31267.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|315927335|gb|EFV06679.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 317

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|329849879|ref|ZP_08264725.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
 gi|328841790|gb|EGF91360.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
          Length = 268

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 8/248 (3%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
               +  E   K+    K+                  L+          +  +       
Sbjct: 23  STTKTETETRLKSEAAAKLTQAGVTGVTVTASGQDLVLNGKPDKIAAAQAALKPDGFWTG 82

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
              +  +  +                             A   SS  + +      K + 
Sbjct: 83  PVVAVRVMTATTVATASPAVASESVSATQSVSSSSASTSAAATSSAAATVAEPAPAKPLN 142

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDA 274
               R    I+         +  ++    P+    ++++  VL      +   I G+TD 
Sbjct: 143 RAGQRCQDRINSAVAGGGIGYRFNAYELTPQGERTMREVHRVLKRCPAEVKLTITGYTDN 202

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  LS  RA  A   L  +G  +D+++ + G        ++        NR
Sbjct: 203 V---GADEVNKSLSAGRAVDAMNALTAAGWPDDKVTAV-GAGSADPVASNATAAGRKKNR 258

Query: 333 RIDILVED 340
           R+   +  
Sbjct: 259 RVVFTLSS 266


>gi|239946700|ref|ZP_04698453.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239920976|gb|EER21000.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 155

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+    L++    L+   E   +I GH D          N  L   RA  A
Sbjct: 53  FAFDSSALSPKAKEELERQACWLSKHPEVKATIEGHCDER---GTREYNLGLGERRAAVA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+  +R++ IS +   R  +  +     + NRR + ++
Sbjct: 110 KKFLANKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153


>gi|84515731|ref|ZP_01003092.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
 gi|84510173|gb|EAQ06629.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
          Length = 307

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 217 FETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271
                  +   + D  +  +    F   S+         L ++   LA   +    + GH
Sbjct: 178 VGQANGSLAQQLDDLGHAILRDLDFTIGSAQLSEAAFASLAELAAYLAAYPDRSVALVGH 237

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMN 328
           TD+         N  LS  RA +    L+ + GV+  ++    G  +     ++  +   
Sbjct: 238 TDS---AGALDINIALSQRRARAVLDRLVTRHGVNRRQL-AAEGMGYLAPIASNQTETGR 293

Query: 329 SANRRIDILVED 340
            ANRR++++V  
Sbjct: 294 DANRRVEVIVTS 305


>gi|330815889|ref|YP_004359594.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
 gi|327368282|gb|AEA59638.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
          Length = 218

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 98  QADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLR 154

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV   ++    G             N  N           RR+++ V 
Sbjct: 155 RAQAVKSYLVSKGVESSKVYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 211

Query: 340 DRQ 342
             Q
Sbjct: 212 GTQ 214


>gi|238026527|ref|YP_002910758.1| OmpA/MotB domain-containing protein [Burkholderia glumae BGR1]
 gi|237875721|gb|ACR28054.1| OmpA/MotB domain protein [Burkholderia glumae BGR1]
          Length = 218

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           +   +FD   +   P     L ++   +      + +  G+TD        + N RLSL 
Sbjct: 98  QADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLR 154

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339
           RA +    L+  GV   ++    G             N  N           RR+++ V 
Sbjct: 155 RAQAVKSYLVSKGVESSKVYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 211

Query: 340 DRQ 342
             Q
Sbjct: 212 GTQ 214


>gi|317180579|dbj|BAJ58365.1| flagellar motor protein MotB [Helicobacter pylori F32]
          Length = 257

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 84/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|312142545|ref|YP_003993991.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311903196|gb|ADQ13637.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 352

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           V  E     +  +         F+  SS  L ++  VL +I ++L  + E  + + GHTD
Sbjct: 226 VSVENMEDDLSRTGKAAIYGINFEFDSSQILADSHDVLAEIAKLLLENPELRLYVVGHTD 285

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSA 330
                   + N  LS  RA S    L+    ++ DR+    G      +  +      + 
Sbjct: 286 DL---GSLQYNRNLSERRAESVVDFLIDNHDIASDRLISA-GVGPLAPESTNKTESGRAL 341

Query: 331 NRRIDIL 337
           NRR+ ++
Sbjct: 342 NRRVVLV 348


>gi|330954871|gb|EGH55131.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 831

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 19/299 (6%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
                   +E        + +T S  +       +R++     ++  + +   ++ +   
Sbjct: 535 VRQGYFARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNR 594

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           + +     +   +    LS +Q+ +     L               +++  N        
Sbjct: 595 AQSVATFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGE 654

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTP 235
               +           Q     +   L+   +  +    +    +++   I  I   +  
Sbjct: 655 VDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDT 714

Query: 236 MFDKSSSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLD 290
           +F    +            L  I   L ++     I I GH D       A+ N ++S  
Sbjct: 715 LFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQ 771

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
           RA +    L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 772 RAQTIKTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829


>gi|315634712|ref|ZP_07889996.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
           33393]
 gi|315476660|gb|EFU67408.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
           33393]
          Length = 150

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E   +L      L  +    + I G+TD          N  
Sbjct: 41  LQQRYNTVYFGFDKYNVEGEYAQILDAHAAYLNATPATNVRIEGNTDER---GTPEYNMA 97

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA++    L   GV   +IS +S +   +  +        + NRR
Sbjct: 98  LGERRAHAVQSFLTAKGVQAGQISTVS-YGEEKPAVLGHDEAAYAKNRR 145


>gi|114049133|ref|YP_739683.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113890575|gb|ABI44626.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 185

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           +    +F   S+   PE    +++I   L        +I GHT  +        N  LS 
Sbjct: 57  KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 113

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
           +RA +   VL     +   R++ I G+   R  +     ++   NRR+
Sbjct: 114 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 160


>gi|295675611|ref|YP_003604135.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
 gi|295435454|gb|ADG14624.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
          Length = 168

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 66  FDFDSYSVKDDYQPLLQQHAQYLKGHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            + L   GVS+ ++  +S     +       +   + NRR D+
Sbjct: 123 RRSLSLMGVSDSQMEAVS-LGKEKPLATGHDEASWAQNRRADL 164


>gi|209964212|ref|YP_002297127.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
 gi|7025367|gb|AAF35853.1|AF220007_1 polar flagellar motor protein MopB [Rhodospirillum centenum]
 gi|209957678|gb|ACI98314.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
          Length = 239

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            VL       +++++       +F    +   P  +  L  +G V  +    + + GHTD
Sbjct: 108 QVLITRRDGRLVLALPADL---LFAPGDAALSPAGLRALFVLGGVAGNIGNALEVVGHTD 164

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR-----LKIASDPMN 328
             P  +    NW LSL RA +    L  +G    R   + G A  +       +      
Sbjct: 165 PRPAGSRWPSNWELSLARAQAVADALHGAGYL--RAITVRGQADAQFPETAPFLPVAERM 222

Query: 329 SANRRIDILVEDRQG 343
              RR+D++V +  G
Sbjct: 223 RLARRVDVIVAEHGG 237



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/167 (10%), Positives = 51/167 (30%), Gaps = 7/167 (4%)

Query: 30  LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89
             +W + + D + +++ FF++++ ++   D   +A+    +                 N 
Sbjct: 19  GRAWLVSFTDLVCLMLTFFVMLYAMSDPADPRYRALAGGLHGDLAVRAEGEAAPEAAFNV 78

Query: 90  PERSSQNKID-------LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
              + +  ID                    + I   + +       + +F   ++  S  
Sbjct: 79  DRLNREQAIDLGYLGRVFETQMAGHPELAQVLITRRDGRLVLALPADLLFAPGDAALSPA 138

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
              +L        ++  + ++    +        P + E  LA  + 
Sbjct: 139 GLRALFVLGGVAGNIGNALEVVGHTDPRPAGSRWPSNWELSLARAQA 185


>gi|28898409|ref|NP_798014.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260895070|ref|ZP_05903566.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|260900920|ref|ZP_05909315.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308094379|ref|ZP_05888926.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|28806626|dbj|BAC59898.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086027|gb|EFO35722.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308093578|gb|EFO43273.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308110719|gb|EFO48259.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
          Length = 206

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           ++               ++   LQD           L         +        + +  
Sbjct: 17  QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288
             +   +F   S    P     ++++ + L       I ++G+   +     ++ N  LS
Sbjct: 77  KMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             RA +    L+  G+  +R+ +I GF    L         ++ NRR+   V   +G
Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189


>gi|304395720|ref|ZP_07377603.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
 gi|308186084|ref|YP_003930215.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
           C9-1]
 gi|304357014|gb|EFM21378.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
 gi|308056594|gb|ADO08766.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
           C9-1]
          Length = 175

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   F         +   +L +    L  +     +I GH D          N  L   
Sbjct: 70  NNIVYFGLDKYDVQSDYAQMLDQHATFLRSNPSYKVTIEGHADER---GTPEYNIALGER 126

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D++S +S +   +  +      +   NRR  ++
Sbjct: 127 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 174


>gi|254381948|ref|ZP_04997311.1| secreted protein [Streptomyces sp. Mg1]
 gi|194340856|gb|EDX21822.1| secreted protein [Streptomyces sp. Mg1]
          Length = 262

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 67/236 (28%), Gaps = 21/236 (8%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            +T+            + +       +  +          ++   D +            
Sbjct: 38  PLTRPHSRSPGDPMTTRHRTSAATAVVGLVIAGAHFMGAASAHADDVKPSTPPGTEASAS 97

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
             +  + +     L +  +LA  +   + ++ + +         +  V   L        
Sbjct: 98  PPVAVKPDSPRLKLPQGGVLAAPKVLDMVEVVEDLGGEQRRQETNQTVMMAL-------- 149

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283
                  ++  +F + SS+   +    +Q I   +       + + G TD          
Sbjct: 150 -------QSEVLFPEDSSVFNAQAAARIQAIANEINQQKATRVRVFGFTDDQ---GSYEH 199

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              LS  RA +    L K+  +   I  + G++       +        NRR++I 
Sbjct: 200 GKELSKKRADAVQVELAKTVTNPSVIFDVRGYSEDYPIADNGTEEGRKKNRRVEIT 255


>gi|189349521|ref|YP_001945149.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|221201005|ref|ZP_03574045.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD2M]
 gi|221206543|ref|ZP_03579556.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD2]
 gi|221214397|ref|ZP_03587368.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD1]
 gi|189333543|dbj|BAG42613.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|221165654|gb|EED98129.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD1]
 gi|221173852|gb|EEE06286.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD2]
 gi|221178855|gb|EEE11262.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           multivorans CGD2M]
          Length = 169

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 124 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 166


>gi|331648347|ref|ZP_08349435.1| YfiB [Escherichia coli M605]
 gi|330912368|gb|EGH40878.1| integral membrane protein YfiB [Escherichia coli AA86]
 gi|331042094|gb|EGI14236.1| YfiB [Escherichia coli M605]
          Length = 160

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G +    +    G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLIT-QGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|238757961|ref|ZP_04619142.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
 gi|238703715|gb|EEP96251.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
          Length = 168

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHSAFLRSNPSYKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|325860329|ref|ZP_08173451.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|325482208|gb|EGC85219.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
          Length = 697

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 34/138 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D   +   PE+   L ++ ++L  +    I +  HTD   +   A  N RLS  R
Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325
           A +    L   G+  DR++ + G+   R                 +D             
Sbjct: 586 ADAVVAYLTSHGIVRDRLTPV-GYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKE 644

Query: 326 ---PMNSANRRIDILVED 340
                N  NRR +  V  
Sbjct: 645 KQEIANQLNRRTEFTVLR 662


>gi|323978486|gb|EGB73569.1| OmpA family protein [Escherichia coli TW10509]
          Length = 160

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTRARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160


>gi|261251019|ref|ZP_05943593.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
 gi|260937892|gb|EEX93880.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
          Length = 305

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   S    +    + ++   +      I+I GHTD   ++     N +LSL RA +  
Sbjct: 62  FDFDKSELKEQDKQSIDRLISSIRKLHGQIAIVGHTD---YQGSDDYNVKLSLRRAEAVK 118

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
             +    +   R   ++  +   +  +       N+ NRR  ++ E  Q
Sbjct: 119 AYMQTQ-LDASRYDWEVKYYGESKPLVEGQSKQANAENRRAYVVFEQTQ 166



 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 12/165 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            + K L   + K+     ++              +       +  + +++        F 
Sbjct: 138 GESKPLVEGQSKQANAENRRAYVVFEQTQTQQENEFCAPPEPQRKVFVAMTSH-----FG 192

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
              +   P     L +    L      + I GHTD   ++     N RL+  RA S  Q 
Sbjct: 193 FDEAKLKPIDKTSLDEFANQLNGLNGRVLIAGHTD---YQGSISYNERLAEQRAESVLQY 249

Query: 299 LMKSGVSEDRIS-KISGFAHHRLKIASD--PMNSANRRIDILVED 340
           L    +  ++   ++  F              N+ NRR  I+ ++
Sbjct: 250 LQTK-LDPNQFVWEVKSFGELNPVTQEQDLDANALNRRAFIVFKE 293


>gi|219684554|ref|ZP_03539497.1| outer membrane protein [Borrelia garinii PBr]
 gi|219671916|gb|EED28970.1| outer membrane protein [Borrelia garinii PBr]
          Length = 389

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K ++ E    GI +S+  +     F   S   L +    L  I
Sbjct: 250 DNFIETEVENYIQEKKIKDIVVEKNNKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L       I I GHT+      +  + + LS  RA +    L+K  V         G
Sbjct: 305 AKLLEKFEKNNILIEGHTEQF---GLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKG 361

Query: 315 FAHHRLKIAS-DPMNSANRRIDILVED 340
           +   + K  +  P+ + NRR++I + +
Sbjct: 362 WGSKKPKYPNSSPLKAKNRRVEITILN 388


>gi|330894565|gb|EGH27226.1| OmpA/MotB [Pseudomonas syringae pv. mori str. 301020]
          Length = 73

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           A  N  LS  RA S    L++ GV   R+  + G+        +  +   + NRR+++ +
Sbjct: 1   ASYNQSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTI 59

Query: 339 EDRQ 342
            +  
Sbjct: 60  SNDN 63


>gi|329118055|ref|ZP_08246768.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465943|gb|EGF12215.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 248

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F        P+ I  L  +   L   + + + + GHTD   F    + N  LS  RA  
Sbjct: 90  LFGFDKDNLRPQAIDTLNDLAGRLSNENVQAVRVEGHTD---FMGSEQYNQALSERRANV 146

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+  GV   +IS + G    +
Sbjct: 147 VANYLVNQGVPAGKISAV-GLGESQ 170


>gi|294139759|ref|YP_003555737.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293326228|dbj|BAJ00959.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 361

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 ++  +      +    V           +      +  F  +SS    E+   +
Sbjct: 206 DSDNDGVADDMDQCADTSANHQVDANGCTVYTETTEQRDVGSIQFANNSSAVKTESFERI 265

Query: 253 QKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
           +K+   +  +    + I GH         A  N  LS  RA +  ++L++  G+S+DR+ 
Sbjct: 266 EKLATYMNTNPKSTVLISGHASNV---GKADYNMILSDKRAKAVAKILVEKFGISQDRVE 322

Query: 311 KISGFAHHRLKIASDPMNS--ANRRID 335
              GF   +  I    + +  ANRRI+
Sbjct: 323 A-KGFGVTQPIIQGRSVEANKANRRIE 348


>gi|113868784|ref|YP_727273.1| outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Ralstonia eutropha H16]
 gi|113527560|emb|CAJ93905.1| outer membrane protein or related peptidoglycan-associated
           (lipo)protein [Ralstonia eutropha H16]
          Length = 168

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +L +  + L  +      I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYTVKSDYQGMLGEHAKYLGSNKGRKILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GV + ++  +S     + K     +   + NRR DI
Sbjct: 120 RAEAVRRSLASMGVPDGQMEAVS-LGKEKPKATGHDEASWAENRRADI 166


>gi|260779147|ref|ZP_05888039.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605311|gb|EEX31606.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 179

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L+ +    ++I GH D          N  L  
Sbjct: 73  ESQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER---GTPEYNIALGE 129

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 130 RRATAVAKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 178


>gi|210135015|ref|YP_002301454.1| flagellar motor protein MotB [Helicobacter pylori P12]
 gi|210132983|gb|ACJ07974.1| flagellar motor rotation protein MotB [Helicobacter pylori P12]
          Length = 257

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 84/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            S++   ++ +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|163793574|ref|ZP_02187549.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159181376|gb|EDP65891.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 293

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   ++  PE+   L  + E++       + I GHTD       +  N  L+L RA   
Sbjct: 192 FEVGGNVLTPESQASLPTLLEIIRQRVLPGVEIAGHTDRV---GASSVNDALALRRAELV 248

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            Q+++  G+S  R+ ++  F      + +        NRR++I V 
Sbjct: 249 QQMMLDLGISR-RLIRVDSFGERDPVVPTADGVDEPRNRRVEITVR 293


>gi|225350130|gb|ACN87975.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 70/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N  LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLELSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 343

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 17/121 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD + +   PE    L  +   +     +  V ++ G+TD          N RLS 
Sbjct: 221 SDVLFDFNKATLKPEGGQALDTLYGEIEAARPTDGVATVIGYTDRI---GSDAYNQRLSE 277

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA---------NRRIDILVE 339
            RA +    L+  G+   +++ + G               S          +RR+++ VE
Sbjct: 278 QRAQTVADYLVGKGLPAGKVN-VEGRGKGSPVTGDSCTSKSKHELIVCLAPDRRVEVKVE 336

Query: 340 D 340
            
Sbjct: 337 G 337


>gi|66047081|ref|YP_236922.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63257788|gb|AAY38884.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 386

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      S+               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPPPATGAENSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  S   K     D    K    S   +   + +  +     S +         
Sbjct: 80  WYWPFGSSDSAQAKPDAVADKPAAKPAAPSMVAKSETDTKWWWPFGNDSAKDEPKALPMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTDANQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283


>gi|73540500|ref|YP_295020.1| OmpA/MotB [Ralstonia eutropha JMP134]
 gi|72117913|gb|AAZ60176.1| OmpA/MotB [Ralstonia eutropha JMP134]
          Length = 170

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S    PE   +L +  + L  +      I+G+TD       +  N  L   
Sbjct: 65  KRSVYFDFDSYSVKPEYQSMLGEHAKYLGSNKGRKILIQGNTDER---GTSEYNLALGQK 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           RA +  + L   GVS+ ++  +S     + K     +   + NRR DI
Sbjct: 122 RAEAVRRSLATMGVSDSQMEAVS-LGKEKPKSTGHDEAAWAENRRADI 168


>gi|189353747|ref|YP_001949374.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
 gi|189337769|dbj|BAG46838.1| putative OmpA family transmembrane protein [Burkholderia
           multivorans ATCC 17616]
          Length = 266

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287
              +F  + S      P     L      +        I + GHTD          N  L
Sbjct: 148 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDESNRAL 204

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
           S  RA +  + L+  G+   RI +  G    +      P            +RR+ I V
Sbjct: 205 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 262


>gi|330977950|gb|EGH77853.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 378

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      S+               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPAPAAGAENSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K     D    K    +   +   + +  +     S +         
Sbjct: 80  WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDTKWWWPFGNDSSKDEPKALAMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283


>gi|320538522|ref|ZP_08038383.1| OmpA family protein [Treponema phagedenis F0421]
 gi|320144629|gb|EFW36384.1| OmpA family protein [Treponema phagedenis F0421]
          Length = 1347

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 215  VLFETTRTGILI---SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270
            VL       + I   SII ++N P F       + + + VL++I ++L    +    + G
Sbjct: 1215 VLIIRDGNRLKIAVPSIIFRKNEPDFQDLPQATVNKNLQVLKRIAQILNKFPDYKIRVEG 1274

Query: 271  H--TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDP 326
            H  T     R        LS  RA +  Q L+++GV   R++   G              
Sbjct: 1275 HANTTTGTLREEREYLLPLSEKRAEAIRQYLIENGVRASRLTA-EGKGGTEPVADFTDRN 1333

Query: 327  MNSANRRIDILV 338
                NRR++ ++
Sbjct: 1334 NWWKNRRVEFIL 1345


>gi|161525757|ref|YP_001580769.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
 gi|160343186|gb|ABX16272.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
           17616]
          Length = 176

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 74  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 131 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 173


>gi|183219622|ref|YP_001837618.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909761|ref|YP_001961316.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774437|gb|ABZ92738.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778044|gb|ABZ96342.1| Chemotaxis MotB protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 277

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 18/212 (8%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            +  ++ +      KST    +  +  +         +I ++  +   ++L+K       
Sbjct: 41  KTDAKEMQIILSAFKSTTGFFTGGQTLSKGSLEEMGMQIESLPSQVVGRNLSKSKKDAQE 100

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
               +     V       G++IS+        F   S+I  P     L+K   ++     
Sbjct: 101 VFKPEVEAGKVRISENERGLVISL---VGADYFYPGSAILTPAIRETLRKAAGLIKGLER 157

Query: 265 VISIRGHTD-------ASPFRNIARD--NWRLSLDRA-YSAYQVLMKSGVSEDRISKISG 314
            + + GH+D       + P R       NW L+  RA  +   ++    +       +S 
Sbjct: 158 FVRVEGHSDDDAVNPVSRPGREEREYINNWDLAGARAVNATVFMINAEEIEPSWFQAVS- 216

Query: 315 FAHHRLKI-ASD-PMNSA--NRRIDILVEDRQ 342
           F  +R  +  ++    +   NRR+DI++   +
Sbjct: 217 FGSYRPLVLENEGTPEAKAFNRRVDIIILTEK 248



 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    +    +  +   Y D +T+L+ FF++++    TD    + I   F         
Sbjct: 4   KKEKCPECIQKVPEFMATYGDMVTLLLCFFILLYTTGKTDAKEMQIILSAFKSTTGFFTG 63

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                           ++     +  +++K+  D +
Sbjct: 64  GQTLSKGSLEEMGMQIESLPSQVVGRNLSKSKKDAQ 99


>gi|28898885|ref|NP_798490.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
           2210633]
 gi|1170999|sp|P46233|MOTY_VIBPA RecName: Full=Sodium-type flagellar protein motY; Flags: Precursor
 gi|497129|gb|AAA21574.1| MotY [Vibrio parahaemolyticus]
 gi|28807104|dbj|BAC60374.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
           2210633]
 gi|328474556|gb|EGF45361.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus 10329]
          Length = 293

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++          +     +  S  D   T + +++        +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQ-SKYNAFSDCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+ E
Sbjct: 199 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQS---LSERRAESLRTYFESLGLPE 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 256 DRI-QVQGYGKRRPIADNGTPIGKDKNRRVVISLGRTQ 292


>gi|114330317|ref|YP_746539.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
 gi|114307331|gb|ABI58574.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
          Length = 173

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            R +  FD  S     E   ++      L  +    + ++G+TD          N  L  
Sbjct: 63  SRRSVYFDFDSYTVKGEYRDLVLAHAAYLRDNLNAQVLLQGNTDER---GSREYNLALGQ 119

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA S   +L+ SG  + ++  +S     + +   + +   + NRR DIL
Sbjct: 120 RRANSVKDILLLSGARDQQVEAVS-LGEEKPRALGSDESSWAENRRTDIL 168


>gi|261493427|ref|ZP_05989952.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310921|gb|EEY12099.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 153

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            +  Q NT  F   S     E   +L    ++LA +   ++I GH D          N  
Sbjct: 46  QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 102

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   G +    +    +   +  +        + NRR
Sbjct: 103 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 148


>gi|261496884|ref|ZP_05993252.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261307408|gb|EEY08743.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 157

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            +  Q NT  F   S     E   +L    ++LA +   ++I GH D          N  
Sbjct: 50  QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 106

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   G +    +    +   +  +        + NRR
Sbjct: 107 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 152


>gi|269123033|ref|YP_003305610.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
           DSM 12112]
 gi|268314359|gb|ACZ00733.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 367

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 10/139 (7%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +  L     +  +L           I +      FD        E   ++  +   L   
Sbjct: 237 IRELENKIEMLTMLINNMDKNRDKEIKEIYFISGFDSGKFTLKQEHKNIIDSLISGLKDK 296

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I + G+TD        + N  L L+RA S    L   GV   ++ +      + L  
Sbjct: 297 E--IIVVGYTDTD---GTDKYNLNLGLNRAKSVKIYLENKGV---KVKETRSAGFNELIR 348

Query: 323 ASDPMN--SANRRIDILVE 339
            +      + NRR++I+V+
Sbjct: 349 DNKTSENKALNRRVEIMVK 367


>gi|167950585|ref|ZP_02537659.1| OmpA/MotB [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 83

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
            R  A  N  LS  RA +    L   GV   RI ++ G      + + +       NRR+
Sbjct: 4   IRGTAEYNQHLSERRAENVAYFLEDQGVPAARI-RVEGRGRSEPRASHETEGDRQLNRRV 62

Query: 335 DILVE 339
           +I V 
Sbjct: 63  EIYVR 67


>gi|254360704|ref|ZP_04976852.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica PHL213]
 gi|153091274|gb|EDN73248.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
           haemolytica PHL213]
          Length = 161

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            +  Q NT  F   S     E   +L    ++LA +   ++I GH D          N  
Sbjct: 54  QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 110

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   G +    +    +   +  +        + NRR
Sbjct: 111 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 156


>gi|330989073|gb|EGH87176.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 831

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 84/294 (28%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +E        + +T S  +       +R++     ++  + +   ++ +   + +  
Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L                                 +
Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQAPHDTGMSAQAAGEVDDYQ 659

Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      Q     +   L+   +  +    +    +++   I  I   +  +F   
Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719

Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            +            L  I   L ++     I I GH D       A+ N ++S  RA + 
Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829


>gi|126173976|ref|YP_001050125.1| OmpA domain-containing protein [Shewanella baltica OS155]
 gi|153000268|ref|YP_001365949.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
 gi|160874901|ref|YP_001554217.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
 gi|304409845|ref|ZP_07391465.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
 gi|307304201|ref|ZP_07583954.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
 gi|125997181|gb|ABN61256.1| OmpA domain protein [Shewanella baltica OS155]
 gi|151364886|gb|ABS07886.1| Peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
 gi|160860423|gb|ABX48957.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
 gi|304352363|gb|EFM16761.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
 gi|306913099|gb|EFN43522.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
 gi|315267138|gb|ADT93991.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS678]
          Length = 178

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           +++   FD   S    +   +L+  G  L     V   I GH D          N  L  
Sbjct: 72  KQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++  +  +   +    S        NRR  ++
Sbjct: 129 RRAKAVAKYLQGMGVQPSQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177


>gi|50235065|gb|AAT70735.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       +R     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|288927607|ref|ZP_06421454.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330441|gb|EFC69025.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 676

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D       PE+   L ++ ++L  +    I +  H D   +R     N
Sbjct: 502 ITAPVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCD---YRGTPEYN 558

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMN-------------- 328
             LS  RA +  Q L+ +G++  R++ + G+   +                         
Sbjct: 559 KVLSQHRANAVVQYLIDAGIAPQRLTPV-GYGKEKPKTIRKKLTERYKWLKEGDVLTEDF 617

Query: 329 -------------SANRRIDILVED 340
                          NRR + +V+ 
Sbjct: 618 ITKLDKDKQEICNQLNRRTEFVVQR 642


>gi|169839536|ref|ZP_02872724.1| OmpA/MotB domain protein [candidate division TM7 single-cell
           isolate TM7a]
          Length = 172

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F     I     I  L++I  +L    E  ++   GHTD++      + N +LSL RA +
Sbjct: 60  FKVDGKIINENEISELKEIVSILNEFGESGTVDFIGHTDST---GTKKYNQKLSLTRARN 116

Query: 295 AYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A ++  + G+     I +ISG         ++       NRR++IL
Sbjct: 117 AARLFREFGLKDAISIGEISGKGEEDPVDLNETDQGKYINRRVEIL 162


>gi|332520207|ref|ZP_08396671.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332044766|gb|EGI80960.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 648

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD        +  V L+KI + +   + +   +R HTD+    N +  N  LS  R
Sbjct: 536 NIIYFDLDKHYIRQDAEVELRKIIDFMNVYSNIKIDVRSHTDSR---NTSEYNLDLSNRR 592

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           A +    L+   G++  R+    G+   +L+         S+  +  NRR + ++
Sbjct: 593 AQATIDYLVNVGGINRARL-TGKGYGELQLRNRCGDGVPCSESEHQLNRRSEFII 646


>gi|39937736|ref|NP_950012.1| outer membrane protein OprF [Rhodopseudomonas palustris CGA009]
 gi|39651596|emb|CAE30118.1| possible outer membrane protein OprF (AF117972) [Rhodopseudomonas
           palustris CGA009]
          Length = 216

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +             S  + +++   +       + +   A     + + +    +     
Sbjct: 22  AAFPLGVASAGEVTSDQIVRALTPNKPLTRSLSAAQPAAATVDPTQAKFVDSLRNRPTRS 81

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263
           L +    +       +  I + I        F+ +S+    +    ++ +G+ L+     
Sbjct: 82  LSSGERTQIAEITKDKPNIDLEIT-------FEYNSANISRQAAPAVEALGKALSSPDLK 134

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
                + GHTD+         N  LS  RA +  +VL++  G++   +  + G+   RLK
Sbjct: 135 GGTFVVAGHTDSV---GSDSFNQDLSERRADTIKRVLVEKYGIAGADLVTV-GYGESRLK 190

Query: 322 IASDPMNSANRRIDILVEDRQ 342
             + P +  NRR+ ++    Q
Sbjct: 191 DPAHPDSGINRRVQVVNMSDQ 211


>gi|89069954|ref|ZP_01157287.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
 gi|89044508|gb|EAR50636.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
          Length = 298

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+   P +   L  +   LA +     +  GHTD+         N  LS  RA   
Sbjct: 193 FETGSARLGPGSFASLDALARYLAAAPARRVVLVGHTDSQ---GSLAGNISLSRRRADQV 249

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L+ + G    +++   G  +     ++        NRR++ ++   +
Sbjct: 250 RTRLIAEHGTDPAQLTA-DGVGYLAPVASNLTPEGREANRRVEAVLVSTE 298


>gi|50235075|gb|AAT70740.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +    + +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGSPWPDS--------------- 215

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 216 -DNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|27366370|ref|NP_761898.1| sodium-type flagellar protein motY [Vibrio vulnificus CMCP6]
 gi|27362571|gb|AAO11425.1| Sodium-type flagellar protein motY precursor [Vibrio vulnificus
           CMCP6]
          Length = 293

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     V      +   IS         ++++     
Sbjct: 140 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 195

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I E + +++++  +   T        +     LS  RA S        G++
Sbjct: 196 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLT 254

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           EDRI ++ G+   R    +        NRR+ I +   +
Sbjct: 255 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 292


>gi|238785870|ref|ZP_04629838.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
           43970]
 gi|238713240|gb|EEQ05284.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
           43970]
          Length = 168

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|296410002|gb|ADH15777.1| OmpP6 [Haemophilus haemolyticus]
          Length = 144

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 39  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 95

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++  +S +   +  +      +   NRR
Sbjct: 96  LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 143


>gi|259090547|gb|ACV91896.1| OprL [Pseudomonas fluorescens]
 gi|259090549|gb|ACV91897.1| OprL [Pseudomonas fluorescens]
 gi|259090551|gb|ACV91898.1| OprL [Pseudomonas fluorescens]
 gi|259090557|gb|ACV91901.1| OprL [Pseudomonas fluorescens]
 gi|259090559|gb|ACV91902.1| OprL [Pseudomonas fluorescens]
 gi|259090563|gb|ACV91904.1| OprL [Pseudomonas fluorescens]
 gi|259090565|gb|ACV91905.1| OprL [Pseudomonas fluorescens]
 gi|259090567|gb|ACV91906.1| OprL [Pseudomonas fluorescens]
 gi|259090569|gb|ACV91907.1| OprL [Pseudomonas fluorescens]
 gi|259090571|gb|ACV91908.1| OprL [Pseudomonas fluorescens]
 gi|259090585|gb|ACV91915.1| OprL [Pseudomonas fluorescens]
 gi|259090587|gb|ACV91916.1| OprL [Pseudomonas fluorescens]
          Length = 157

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TDA         N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDAR---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + L+  GV+  ++  +S +   R     +
Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGN 151


>gi|163748690|ref|ZP_02155943.1| OmpA family protein [Shewanella benthica KT99]
 gi|161331800|gb|EDQ02604.1| OmpA family protein [Shewanella benthica KT99]
          Length = 199

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S    P     ++ I   +        +I GH   +      + N  LS +RA +
Sbjct: 76  LFANDSYYIAPLHYDQVEVIASFMNEFKNTKVTIEGHCSKT---GSYQHNLSLSQNRADA 132

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
              +L +   ++ DR+  I G+++ R    S    +   NRR+
Sbjct: 133 VTSLLTERFSIAPDRLIAI-GYSYDRPVDESGTHRAQTRNRRV 174


>gi|82776019|ref|YP_402366.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           dysenteriae Sd197]
 gi|309786420|ref|ZP_07681046.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
 gi|81240167|gb|ABB60877.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae Sd197]
 gi|308925814|gb|EFP71295.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
          Length = 173

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|15800457|ref|NP_286469.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 EDL933]
 gi|15830030|ref|NP_308803.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. Sakai]
 gi|16128716|ref|NP_415269.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K-12 substr. MG1655]
 gi|30062096|ref|NP_836267.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           flexneri 2a str. 2457T]
 gi|56479690|ref|NP_706493.2| peptidoglycan-associated outer membrane lipoprotein [Shigella
           flexneri 2a str. 301]
 gi|74311265|ref|YP_309684.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           sonnei Ss046]
 gi|82543168|ref|YP_407115.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           boydii Sb227]
 gi|89107599|ref|AP_001379.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K-12 substr. W3110]
 gi|110804633|ref|YP_688153.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           flexneri 5 str. 8401]
 gi|157157682|ref|YP_001461902.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli E24377A]
 gi|157160223|ref|YP_001457541.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli HS]
 gi|170020914|ref|YP_001725868.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli ATCC 8739]
 gi|170080408|ref|YP_001729728.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170683065|ref|YP_001742852.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli SMS-3-5]
 gi|187731438|ref|YP_001879398.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
           boydii CDC 3083-94]
 gi|188492398|ref|ZP_02999668.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
 gi|189010018|ref|ZP_02804243.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189402679|ref|ZP_02784049.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189402925|ref|ZP_03006899.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404924|ref|ZP_02811914.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC869]
 gi|194430753|ref|ZP_03063168.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
 gi|194440229|ref|ZP_03072261.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
 gi|195936736|ref|ZP_03082118.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. EC4024]
 gi|208815415|ref|ZP_03256594.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822195|ref|ZP_03262514.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396423|ref|YP_002269375.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917992|ref|YP_002292076.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli SE11]
 gi|217326423|ref|ZP_03442507.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218553268|ref|YP_002386181.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli IAI1]
 gi|218694165|ref|YP_002401832.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 55989]
 gi|218699113|ref|YP_002406742.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli IAI39]
 gi|218704068|ref|YP_002411587.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli UMN026]
 gi|238900006|ref|YP_002925802.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli BW2952]
 gi|253774288|ref|YP_003037119.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160811|ref|YP_003043919.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B str. REL606]
 gi|254791898|ref|YP_003076735.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. TW14359]
 gi|256021183|ref|ZP_05435048.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
           D9]
 gi|256023656|ref|ZP_05437521.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           sp. 4_1_40B]
 gi|260842947|ref|YP_003220725.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O103:H2 str. 12009]
 gi|260853976|ref|YP_003227867.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O26:H11 str. 11368]
 gi|260866872|ref|YP_003233274.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O111:H- str. 11128]
 gi|261224452|ref|ZP_05938733.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261254556|ref|ZP_05947089.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291281684|ref|YP_003498502.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
           O55:H7 str. CB9615]
 gi|293403996|ref|ZP_06647990.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli FVEC1412]
 gi|293409125|ref|ZP_06652701.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293414026|ref|ZP_06656675.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B185]
 gi|293433009|ref|ZP_06661437.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B088]
 gi|297520454|ref|ZP_06938840.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli OP50]
 gi|298379776|ref|ZP_06989381.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli FVEC1302]
 gi|300816391|ref|ZP_07096613.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
 gi|300822970|ref|ZP_07103105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
 gi|300900748|ref|ZP_07118897.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
 gi|300907000|ref|ZP_07124669.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
 gi|300918402|ref|ZP_07135002.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
 gi|300926145|ref|ZP_07141958.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
 gi|300929453|ref|ZP_07144921.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
 gi|300937786|ref|ZP_07152583.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
 gi|300947178|ref|ZP_07161388.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
 gi|300957690|ref|ZP_07169879.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
 gi|301020787|ref|ZP_07184851.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
 gi|301027077|ref|ZP_07190449.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
 gi|301305229|ref|ZP_07211327.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
 gi|301327934|ref|ZP_07221105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
 gi|301648046|ref|ZP_07247813.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
 gi|307137354|ref|ZP_07496710.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli H736]
 gi|307314794|ref|ZP_07594388.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
 gi|309797456|ref|ZP_07691848.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
 gi|312970820|ref|ZP_07784999.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
 gi|331662101|ref|ZP_08363024.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
 gi|331667108|ref|ZP_08367973.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
 gi|71159616|sp|P0A913|PAL_ECO57 RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|71159617|sp|P0A912|PAL_ECOLI RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|71159618|sp|P0A914|PAL_SHIFL RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
           Precursor
 gi|12513674|gb|AAG55077.1|AE005252_13 peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EDL933]
 gi|41360|emb|CAA46673.1| peptidoglycan-associated lipoprotein [Escherichia coli K-12]
 gi|42257|emb|CAA28771.1| unnamed protein product [Escherichia coli K-12]
 gi|1651333|dbj|BAA35407.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K12 substr. W3110]
 gi|1786962|gb|AAC73835.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K-12 substr. MG1655]
 gi|13360235|dbj|BAB34199.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           Sakai]
 gi|30040340|gb|AAP16073.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
           2457T]
 gi|56383241|gb|AAN42200.2| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
           301]
 gi|73854742|gb|AAZ87449.1| peptidoglycan-associated lipoprotein [Shigella sonnei Ss046]
 gi|81244579|gb|ABB65287.1| peptidoglycan-associated lipoprotein [Shigella boydii Sb227]
 gi|110614181|gb|ABF02848.1| peptidoglycan-associated lipoprotein [Shigella flexneri 5 str.
           8401]
 gi|157065903|gb|ABV05158.1| peptidoglycan-associated lipoprotein [Escherichia coli HS]
 gi|157079712|gb|ABV19420.1| peptidoglycan-associated lipoprotein [Escherichia coli E24377A]
 gi|169755842|gb|ACA78541.1| peptidoglycan-associated lipoprotein [Escherichia coli ATCC 8739]
 gi|169888243|gb|ACB01950.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170520783|gb|ACB18961.1| peptidoglycan-associated lipoprotein [Escherichia coli SMS-3-5]
 gi|187428430|gb|ACD07704.1| peptidoglycan-associated lipoprotein [Shigella boydii CDC 3083-94]
 gi|188487597|gb|EDU62700.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
 gi|189002834|gb|EDU71820.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354292|gb|EDU72711.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363387|gb|EDU81806.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189373170|gb|EDU91586.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC869]
 gi|194411203|gb|EDX27610.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
 gi|194420838|gb|EDX36893.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
 gi|208732063|gb|EDZ80751.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737680|gb|EDZ85363.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157823|gb|ACI35256.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209776378|gb|ACI86501.1| peptidoglycan-associated lipoprotein [Escherichia coli]
 gi|209776380|gb|ACI86502.1| peptidoglycan-associated lipoprotein [Escherichia coli]
 gi|209776382|gb|ACI86503.1| peptidoglycan-associated lipoprotein [Escherichia coli]
 gi|209776384|gb|ACI86504.1| peptidoglycan-associated lipoprotein [Escherichia coli]
 gi|209776386|gb|ACI86505.1| peptidoglycan-associated lipoprotein [Escherichia coli]
 gi|209911251|dbj|BAG76325.1| peptidoglycan-associated lipoprotein [Escherichia coli SE11]
 gi|217322644|gb|EEC31068.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350897|emb|CAU96595.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 55989]
 gi|218360036|emb|CAQ97583.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli IAI1]
 gi|218369099|emb|CAR16853.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli IAI39]
 gi|218431165|emb|CAR12041.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli UMN026]
 gi|238861988|gb|ACR63986.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli BW2952]
 gi|242376503|emb|CAQ31207.1| pal, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
           Transport System and The Colicin A Import System
           [Escherichia coli BL21(DE3)]
 gi|253325332|gb|ACT29934.1| peptidoglycan-associated lipoprotein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972712|gb|ACT38383.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B str. REL606]
 gi|253976906|gb|ACT42576.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli BL21(DE3)]
 gi|254591298|gb|ACT70659.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. TW14359]
 gi|257752625|dbj|BAI24127.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O26:H11 str. 11368]
 gi|257758094|dbj|BAI29591.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O103:H2 str. 12009]
 gi|257763228|dbj|BAI34723.1| peptidoglycan-associated outer membrane lipoprotein Pal
           [Escherichia coli O111:H- str. 11128]
 gi|260450105|gb|ACX40527.1| peptidoglycan-associated lipoprotein [Escherichia coli DH1]
 gi|281599943|gb|ADA72927.1| Peptidoglycan-associated lipoprotein precursor [Shigella flexneri
           2002017]
 gi|284920528|emb|CBG33590.1| peptidoglycan-associated lipoprotein [Escherichia coli 042]
 gi|290761557|gb|ADD55518.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323828|gb|EFE63250.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B088]
 gi|291428582|gb|EFF01607.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli FVEC1412]
 gi|291434084|gb|EFF07057.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli B185]
 gi|291469593|gb|EFF12077.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298279474|gb|EFI20982.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli FVEC1302]
 gi|299879411|gb|EFI87622.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
 gi|300315608|gb|EFJ65392.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
 gi|300355807|gb|EFJ71677.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
 gi|300398433|gb|EFJ81971.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
 gi|300401221|gb|EFJ84759.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
 gi|300414465|gb|EFJ97775.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
 gi|300417844|gb|EFK01155.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
 gi|300453164|gb|EFK16784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
 gi|300457197|gb|EFK20690.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
 gi|300462562|gb|EFK26055.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
 gi|300524511|gb|EFK45580.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
 gi|300531081|gb|EFK52143.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
 gi|300839541|gb|EFK67301.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
 gi|300845577|gb|EFK73337.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
 gi|301073872|gb|EFK88678.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
 gi|306905692|gb|EFN36220.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
 gi|308118980|gb|EFO56242.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
 gi|309700963|emb|CBJ00260.1| peptidoglycan-associated lipoprotein [Escherichia coli ETEC H10407]
 gi|310336581|gb|EFQ01748.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
 gi|313649616|gb|EFS14040.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
           2457T]
 gi|315059984|gb|ADT74311.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli W]
 gi|315135398|dbj|BAJ42557.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
           DH1]
 gi|315257660|gb|EFU37628.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 85-1]
 gi|315614617|gb|EFU95259.1| peptidoglycan-associated lipoprotein [Escherichia coli 3431]
 gi|320172956|gb|EFW48184.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
           dysenteriae CDC 74-1112]
 gi|320179418|gb|EFW54375.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
           boydii ATCC 9905]
 gi|320183982|gb|EFW58806.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
           flexneri CDC 796-83]
 gi|320193146|gb|EFW67786.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Escherichia coli O157:H7 str. EC1212]
 gi|320198139|gb|EFW72743.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Escherichia coli EC4100B]
 gi|320637999|gb|EFX07768.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. G5101]
 gi|320643395|gb|EFX12575.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H- str. 493-89]
 gi|320648689|gb|EFX17325.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H- str. H 2687]
 gi|320654327|gb|EFX22380.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320659959|gb|EFX27501.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664785|gb|EFX31923.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323153743|gb|EFZ39990.1| peptidoglycan-associated lipoprotein [Escherichia coli EPECa14]
 gi|323158793|gb|EFZ44806.1| peptidoglycan-associated lipoprotein [Escherichia coli E128010]
 gi|323163900|gb|EFZ49710.1| peptidoglycan-associated lipoprotein [Shigella sonnei 53G]
 gi|323170862|gb|EFZ56512.1| peptidoglycan-associated lipoprotein [Escherichia coli LT-68]
 gi|323180019|gb|EFZ65575.1| peptidoglycan-associated lipoprotein [Escherichia coli 1180]
 gi|323185098|gb|EFZ70464.1| peptidoglycan-associated lipoprotein [Escherichia coli 1357]
 gi|323379456|gb|ADX51724.1| peptidoglycan-associated lipoprotein [Escherichia coli KO11]
 gi|323938280|gb|EGB34538.1| peptidoglycan-associated lipoprotein [Escherichia coli E1520]
 gi|323942964|gb|EGB39128.1| peptidoglycan lipoprotein [Escherichia coli E482]
 gi|323946993|gb|EGB43007.1| peptidoglycan-associated lipoprotein [Escherichia coli H120]
 gi|323963122|gb|EGB58692.1| peptidoglycan lipoprotein [Escherichia coli H489]
 gi|323967344|gb|EGB62765.1| peptidoglycan lipoprotein [Escherichia coli M863]
 gi|323972028|gb|EGB67248.1| peptidoglycan lipoprotein [Escherichia coli TA007]
 gi|323976278|gb|EGB71368.1| peptidoglycan lipoprotein [Escherichia coli TW10509]
 gi|324020351|gb|EGB89570.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 117-3]
 gi|324116283|gb|EGC10204.1| peptidoglycan lipoprotein [Escherichia coli E1167]
 gi|326341510|gb|EGD65300.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Escherichia coli O157:H7 str. 1044]
 gi|326345729|gb|EGD69468.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Escherichia coli O157:H7 str. 1125]
 gi|327254430|gb|EGE66052.1| peptidoglycan-associated lipoprotein [Escherichia coli STEC_7v]
 gi|331060523|gb|EGI32487.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
 gi|331065464|gb|EGI37357.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
 gi|332093802|gb|EGI98856.1| peptidoglycan-associated lipoprotein [Shigella boydii 5216-82]
 gi|332096454|gb|EGJ01450.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 155-74]
 gi|332097640|gb|EGJ02615.1| peptidoglycan-associated lipoprotein [Shigella boydii 3594-74]
 gi|332342078|gb|AEE55412.1| peptidoglycan-associated lipoprotein [Escherichia coli UMNK88]
 gi|332760890|gb|EGJ91178.1| peptidoglycan-associated lipoprotein [Shigella flexneri 4343-70]
 gi|332761270|gb|EGJ91556.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2747-71]
 gi|332763939|gb|EGJ94177.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-671]
 gi|332768160|gb|EGJ98345.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2930-71]
 gi|333007348|gb|EGK26828.1| peptidoglycan-associated lipoprotein [Shigella flexneri VA-6]
 gi|333007878|gb|EGK27354.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-218]
 gi|333010140|gb|EGK29575.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-272]
 gi|333021092|gb|EGK40349.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-227]
 gi|333021585|gb|EGK40835.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-304]
          Length = 173

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|330818872|ref|YP_004351089.1| Outer membrane protein [Burkholderia gladioli BSR3]
 gi|327374414|gb|AEA65766.1| Outer membrane protein [Burkholderia gladioli BSR3]
          Length = 231

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           NT  F   SS    +    L    +VL      + I G+TD +     +R N RLS  RA
Sbjct: 129 NTVYFYVDSSQLDAKARAGL----DVLPIEASHVQIDGYTDNT---GTSRYNRRLSERRA 181

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            +  + LM  GV   +I+  +         ++      + NRR D++
Sbjct: 182 LAVKRYLMVRGVDAAKITT-TAHGESGAVASNHTAHGRALNRRADVM 227


>gi|296284930|ref|ZP_06862928.1| peptidoglycan-associated protein [Citromicrobium bathyomarinum
           JL354]
          Length = 371

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   PE   VL        +     + + G+TD        + N  L+  
Sbjct: 260 PYIVFFNWDRSDITPEAASVLNNAISAYQNCGNASVMLAGYTDR---SGTVQYNLGLAAR 316

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S  Q +   G+ + RIS    F     ++ +        NRR++I 
Sbjct: 317 RNASVRQYMTGRGIPDARISS-EAFGEANPRVPTADGVRELQNRRVEIT 364


>gi|284097464|ref|ZP_06385561.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283831026|gb|EFC35039.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 148

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290
           +   F         + + VL++  E+L  + +  ++   GH D          N  L   
Sbjct: 42  SDVFFGYDQYAIRSDAVPVLEEDAELLKSTYKDSAVLIEGHCDER---GTVEYNLELGKR 98

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
           RA +    L+  G+ E RI +I  +   R             NRR
Sbjct: 99  RAQAVKDYLVDLGIEESRI-RIVSYGKERPFCTESEPSCWRQNRR 142


>gi|260912914|ref|ZP_05919399.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
           43325]
 gi|260632904|gb|EEX51070.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
           43325]
          Length = 151

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L+ +    + + G+TD          N  
Sbjct: 42  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLSATPATKVVVEGNTDER---GTPEYNIA 98

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 99  LGQRRADAVQNYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 146


>gi|90406796|ref|ZP_01214988.1| flagellar motor protein [Psychromonas sp. CNPT3]
 gi|90312033|gb|EAS40126.1| flagellar motor protein [Psychromonas sp. CNPT3]
          Length = 307

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 10/181 (5%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D   +I  E            +  +K    L+ L  ++   LS  + +   + +  +  
Sbjct: 85  EDSGPAIRSEGMINQANDELSDVDTLKAGWELKQLKTELEVLLSSEIDE---EVLKLDLD 141

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              + I +       +F   S   L      L KI E L     ++ IRG+TD +   + 
Sbjct: 142 GDWLTIEMG---GDLLFAGGSHTLLIAAKKRLNKISEALKPINNLLRIRGYTDNNLIADE 198

Query: 281 -ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             + NW LS  RA+S    L   G+   R+  +  +  + L   +        +RR+ I 
Sbjct: 199 IYQSNWELSGARAFSVLHALNSHGIDGRRMV-VEAYGRYTLAKDAQGKIDKLGSRRVVIA 257

Query: 338 V 338
           +
Sbjct: 258 I 258



 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +      + N+L  W + +ADFMT++ A F++++ ++   ++  K +        K L  
Sbjct: 6   RTRLKMHSGNDLHRWTVSFADFMTLMFAVFVLLYAVSINQEEQYKEVIVKIQKASKLLNQ 65

Query: 79  ASKGIFDEQNPPERSSQNKIDLSID 103
           +      E    E S+    D    
Sbjct: 66  SVFSSEREGILTENSNSIIEDSGPA 90


>gi|330970538|gb|EGH70604.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 830

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  I G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAI-GEGSEKPLVKCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|323493119|ref|ZP_08098250.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           brasiliensis LMG 20546]
 gi|323312590|gb|EGA65723.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           brasiliensis LMG 20546]
          Length = 304

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+        E +  L  +   L     V    + GHTD+         N  LS  RA  
Sbjct: 180 FNIGQKSLSSEQLTTLAALNSYLQADPSVSKILVDGHTDS---SGARASNLALSRVRAEL 236

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
             + L   GVS+  + ++           +      + NRR+ + +    
Sbjct: 237 VSKQLHHLGVSQS-MIEVRAHGSRYPIATNTTTAGKAKNRRVTLRLVRSN 285


>gi|312897410|ref|ZP_07756834.1| OmpA family protein [Megasphaera micronuciformis F0359]
 gi|310621471|gb|EFQ05007.1| OmpA family protein [Megasphaera micronuciformis F0359]
          Length = 397

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 9/140 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                  V     +  + +     +      +     FD  + I   +    L     V 
Sbjct: 260 KKAAPAPVVAEQPRRQVVQEQPGHVYNDYYLESVHFAFDVDTPIAYDQGK--LDHFVAVA 317

Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                ++  + G+TDA         N  LS  R  +  +  +  GV+ +++ ++S    +
Sbjct: 318 KEYPHDMFKLVGNTDAR---GTDAYNDDLSKRRVVNVARYAVDHGVNPEQL-ELSYEGKN 373

Query: 319 RLKIASDP--MNSANRRIDI 336
                +      + NRR+DI
Sbjct: 374 DPVATNATDQGRADNRRVDI 393


>gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 282

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 184 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 240

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            RA +    ++  GV+   ++ + G+        +
Sbjct: 241 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGN 274


>gi|192293517|ref|YP_001994122.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192287266|gb|ACF03647.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 216

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +     +       S  + +++   +       + +   A     + + +    +     
Sbjct: 22  AAFPLGDASAGEVTSDQIVRALTPNKPLTRSLSAAQPAAATGDPTQAKFVDSLRNRPTRS 81

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263
           L +    +       +  I + I        F+ +S+    +    ++ +G+ L+     
Sbjct: 82  LSSGERTQIAEITKDKPNIDLEIT-------FEYNSANISRQAAAAVEALGKALSSPDLK 134

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
                + GHTD+         N  LS  RA +  +VL++  G++   +  + G+   RLK
Sbjct: 135 GGTFVVAGHTDSV---GSDSFNQDLSERRADTIKRVLVEKYGIAGADLVTV-GYGESRLK 190

Query: 322 IASDPMNSANRRIDILVEDRQ 342
             + P +  NRR+ ++    Q
Sbjct: 191 DPAHPDSGINRRVQVVNMSDQ 211


>gi|116329294|ref|YP_799014.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330099|ref|YP_799817.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116122038|gb|ABJ80081.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123788|gb|ABJ75059.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 275

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 18/164 (10%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L+K           +     V       G++IS++       F+  S+I      + L
Sbjct: 87  KALSKSKKLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKITL 143

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302
           +K   ++      + + GH DA+                +NW L+  RA +A   ++   
Sbjct: 144 RKASSLIKELDRFVRVEGHCDANALNPGVAPGKEERAYINNWDLAGARAINATDYIINVE 203

Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342
            +       +S F   R        +    + NRRIDI+V   +
Sbjct: 204 KLDPSWFQAVS-FGAFRPLVIEYAGTPEAKAYNRRIDIVVMTEK 246



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +   N+  + + Y D +T+L+ FF++++    T+    + I   F          
Sbjct: 3   KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
                        + ++    +  + ++K+
Sbjct: 63  QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92


>gi|28897835|ref|NP_797440.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838023|ref|ZP_01990690.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AQ3810]
 gi|260361766|ref|ZP_05774791.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           K5030]
 gi|260876995|ref|ZP_05889350.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AN-5034]
 gi|260899066|ref|ZP_05907507.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           Peru-466]
 gi|260900753|ref|ZP_05909148.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AQ4037]
 gi|28806048|dbj|BAC59324.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748557|gb|EDM59416.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AQ3810]
 gi|308089146|gb|EFO38841.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           Peru-466]
 gi|308093872|gb|EFO43567.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AN-5034]
 gi|308110189|gb|EFO47729.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           AQ4037]
 gi|308113254|gb|EFO50794.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           K5030]
 gi|328473192|gb|EGF44040.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
           10329]
          Length = 174

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 74  FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAQAV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D+IS +S +   +  +        + NRR  ++
Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173


>gi|258621333|ref|ZP_05716367.1| Outer membrane protein [Vibrio mimicus VM573]
 gi|258586721|gb|EEW11436.1| Outer membrane protein [Vibrio mimicus VM573]
          Length = 278

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G     + PE+      +  ++        D  +G  +             +  +    E
Sbjct: 15  GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +       +       +   + +   L   + + ++  KR  +L+     ++S
Sbjct: 67  SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +   N    V   +    +   +        F  +S+   P+ +  L    + L  
Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  +S+ GH D+      A  N +L++ RA    + L   G++ +RI+  S       
Sbjct: 184 RQDLTLSVTGHADS---SGNAEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239

Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343
               +       NRR+ I +         +QG
Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271


>gi|170698906|ref|ZP_02889966.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170136159|gb|EDT04427.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 85

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I GHTD          +  LS  RA +    L+   +   +++  +G    +    +D  
Sbjct: 15  IIGHTDN---SGNRTSHIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTA 70

Query: 328 --NSANRRIDILV 338
              + NRRID  V
Sbjct: 71  DGRARNRRIDFRV 83


>gi|123443145|ref|YP_001007119.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|238752128|ref|ZP_04613611.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
 gi|238765244|ref|ZP_04626173.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
           33638]
 gi|332160930|ref|YP_004297507.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122090106|emb|CAL12969.1| peptidoglycan-associated lipoprotein Pal [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|238696516|gb|EEP89304.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
           33638]
 gi|238709705|gb|EEQ01940.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
 gi|318604837|emb|CBY26335.1| 18k peptidoglycan-associated outer membrane lipoprotein;
           Peptidoglycan-associated lipoprotein precursor; Outer
           membrane protein P6; OmpA/MotB precursor [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665160|gb|ADZ41804.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864066|emb|CBX74143.1| peptidoglycan-associated lipoprotein [Yersinia enterocolitica
           W22703]
          Length = 168

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|118591643|ref|ZP_01549039.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
 gi|118435636|gb|EAV42281.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
          Length = 316

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 59/203 (29%), Gaps = 21/203 (10%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            E  +   ++    ++  +               A     RL+D   +++  ++ +  + 
Sbjct: 117 GEILRRQQQTLPAFRAYQEALGLVDDTELTPAEPAHAMIARLRDRLDELAVVVAQISEEP 176

Query: 211 IVKGVLFETTRTGILISIIDQRNT--------PMFDKSSSIPLPETIVVLQKIGEVL-AH 261
               +    +   I       R            F     +         + + E L   
Sbjct: 177 QDIKIPVTRSGQSISQYSFSTRGYKRKKTLVPIQFVYDQDVMTKAGKTSFEDVQEALEKQ 236

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I + GHTD          N +LSL RA +    L+ +G S     ++ G    +  
Sbjct: 237 GAPDIQVIGHTDPV---GSDAYNLQLSLKRAEAVRSALLAAGYSGS--IEVLGMGESQPF 291

Query: 322 IASD----PMNSAN---RRIDIL 337
              D         N   RR++ +
Sbjct: 292 QFDDPSLYTEEVRNQAHRRVEFV 314


>gi|116621983|ref|YP_824139.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225145|gb|ABJ83854.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 199

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 11/120 (9%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRN 279
           +  ++ +     FD   +   P+ +  L      L           + I GH D      
Sbjct: 78  IDQLLAKIEDAYFDYDKASLRPDAMKALNADSTELRDILKDYPDYKLRIEGHADER---G 134

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
            A  N  L   RA +A + L++ G+   ++  ++ F   R      ++     NRRI I+
Sbjct: 135 SAEYNVALGDRRAATAKEYLVQVGIPSTQLD-VTSFGKERPVCQDHNENCWQKNRRIHIV 193


>gi|296284884|ref|ZP_06862882.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
          Length = 210

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +      +  L  + +       E + +RGH+DA       R N R+S +RA + 
Sbjct: 63  FGAGGTELDETAMAELNGLLDTDQWKQVERVILRGHSDA---GGPDRVNMRVSEERAQAV 119

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILVEDRQG 343
              LM+ G++ED+I +I  F                ++   +ANRR++I +   +G
Sbjct: 120 ADWLMEQGLTEDQI-RIIAFGAQNPVQPNLLPNGEPNERGRAANRRVEITILVPKG 174


>gi|197284482|ref|YP_002150354.1| peptidoglycan-associated outer membrane lipoprotein [Proteus
           mirabilis HI4320]
 gi|194681969|emb|CAR41402.1| peptidoglycan-associated lipoprotein [Proteus mirabilis HI4320]
          Length = 165

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 7/116 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +  + Q N   F         E   +L      L  +    I+I GH D          
Sbjct: 53  QLEQLKQTNIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER---GTPEY 109

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           N  L   RA +    L   GVS D++  I  +   +  +        + NRR  ++
Sbjct: 110 NIALGERRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYAKNRRAVLV 164


>gi|257092706|ref|YP_003166347.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045230|gb|ACV34418.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 225

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +FD + +   P     L ++          + I  GHTD          N +LS  RA
Sbjct: 109 DALFDFNKATLRPAGKAKLDEVVAKAGAIKLEVIIAVGHTDRI---GSDAYNQKLSERRA 165

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDR 341
            +  Q L+  G+  +R+    G          D                +RR+DI +   
Sbjct: 166 AAVKQYLVSKGIDANRVYT-EGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIGT 224

Query: 342 Q 342
           +
Sbjct: 225 K 225


>gi|254228801|ref|ZP_04922224.1| OmpA family protein [Vibrio sp. Ex25]
 gi|151938748|gb|EDN57583.1| OmpA family protein [Vibrio sp. Ex25]
          Length = 281

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            FD    +   +    L  +   ++       I I GHTD       +  N  +S  RA 
Sbjct: 152 SFDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNV---GSSLANLSVSRTRAE 208

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
              + L++ G+ +  + +           +++     + NRR+ + +    
Sbjct: 209 QVAEALVELGIDKS-MIETRAHGSRYPIASNNSTKGQAKNRRVTLRLVRDN 258


>gi|304312902|ref|YP_003812500.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
 gi|301798635|emb|CBL46867.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
          Length = 169

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            +    FD   S    +   +LQ   + L+      I I GH D          N  L  
Sbjct: 58  SQRVVYFDFDKSAVRADAYEILQAHAQYLSSHAGARIRIEGHADER---GTREYNMALGE 114

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA +    L  +G    ++ ++  +           +   + NRR +++
Sbjct: 115 RRAKAVQSFLNANGAGAGQL-EVVSYGEENPIALGHDEASWAQNRRSELV 163


>gi|261211953|ref|ZP_05926239.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
 gi|260838561|gb|EEX65212.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
          Length = 294

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     +      +   IS             S    
Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196

Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   L +I E + +++++  +    +TD++   N +     LS  RA    +     G
Sbjct: 197 KASQKRLAQIAEYIRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           + EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|156934764|ref|YP_001438680.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
           sakazakii ATCC BAA-894]
 gi|260597140|ref|YP_003209711.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
           turicensis z3032]
 gi|156533018|gb|ABU77844.1| hypothetical protein ESA_02604 [Cronobacter sakazakii ATCC BAA-894]
 gi|260216317|emb|CBA29304.1| Peptidoglycan-associated lipoprotein [Cronobacter turicensis z3032]
          Length = 172

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 67  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171


>gi|303231313|ref|ZP_07318049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514043|gb|EFL56049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 339

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD    +P  +    LQ               + G+ D        + N  LS  R    
Sbjct: 237 FDSDQDVPRADQGANLQAALNAANQYKNDQVKLLGNADTD---ANPQYNIGLSERRVQDV 293

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            Q L+ +GV  +R+  I+     +    +   N  + NRR+D+ +  
Sbjct: 294 AQYLVNNGVDANRLIGIA-NGDAKPVATNATANGKAENRRVDVFIHR 339


>gi|323494859|ref|ZP_08099951.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
 gi|323310823|gb|EGA63995.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
          Length = 296

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   S    +    + ++   +      ISI GHTD   ++     N +LSL RA +  
Sbjct: 60  FDFDKSELKEQDKQSIDQLMASIGKLHGQISIVGHTD---YQGSDDYNVKLSLRRAEAVK 116

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
             +    +   R   ++  +   +  +   S   N+ NRR  ++ E  Q
Sbjct: 117 AYMQSK-LDASRYDWEVKYYGESKPLVEGVSKQANAENRRAYVIFEQTQ 164



 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 12/167 (7%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            + K L     K+     ++                         + +++        FD
Sbjct: 136 GESKPLVEGVSKQANAENRRAYVIFEQTQTQQENIFCEPPEPERKVYVAMTSH-----FD 190

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
              +   P     L +    L      + I GHTD   ++     N +L+  RA S  Q 
Sbjct: 191 FDKAQLNPADKASLDEFASNLTGLNGRVLIAGHTD---YQGSISYNEKLAQLRAESVMQY 247

Query: 299 LMKSGVSEDRIS-KISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
           L    +   +   ++  F              N+ NRR  ++ ++ +
Sbjct: 248 LQTK-LDPSQFVWEVKSFGELNPVTQEQDLDANALNRRAFVVFKEGE 293


>gi|319760471|ref|YP_004124409.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039185|gb|ADV33735.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 175

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
            +N   F             +L      L  +    I I GHTD          N  L  
Sbjct: 69  SKNIIYFPLDQYNIPSVFFDILDVHAIFLRKNPLHHIIIEGHTDER---GTPEYNIGLGE 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RAYS  + L   GV  ++IS IS +   +           S NRR
Sbjct: 126 RRAYSIKKYLQSKGVLSNQISTIS-YGKEKPVSFGHTEESYSQNRR 170


>gi|312883339|ref|ZP_07743065.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368955|gb|EFP96481.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 206

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+     +   L  +G  LA    +  +  GH+D +        N +LS+ RA   
Sbjct: 101 FHTGSASVSSNSRYWLDIMGSYLATQPGIDIVIDGHSDNT---GAPSFNDKLSIQRASEV 157

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            + L+++ VS   I    G+  +    ++      + NRR+++
Sbjct: 158 KKQLVRNQVSMGSIYT-RGYGEYVPACSNKTSVGKACNRRVEV 199


>gi|281357860|ref|ZP_06244346.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
 gi|281315807|gb|EFA99834.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
          Length = 216

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S + +P     L +I   ++   E  + + GH D          N  L   RA + 
Sbjct: 110 FAYDSDVLVPSETANLDRIAAYMSDKPELGLLVEGHCDQR---GTEEYNRALGERRANAI 166

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
              L   G+++ R+  IS +   +  +   ++     NRR
Sbjct: 167 RAYLAGKGLADTRMKTIS-YGEDKPAVEGNNEEAWRQNRR 205


>gi|163732772|ref|ZP_02140217.1| OmpA family domain protein [Roseobacter litoralis Och 149]
 gi|161394132|gb|EDQ18456.1| OmpA family domain protein [Roseobacter litoralis Och 149]
          Length = 217

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 5/110 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288
              T  F   S+    E    + +I E L  +       + G TDA         N RL 
Sbjct: 17  DIGTINFAFDSAELDAEAQAKIVEIAERLKENPSYKPTVLIGFTDAVGGLG---YNDRLG 73

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L RA +    L++ GVS DRI  +S      L ++       NRR+ + +
Sbjct: 74  LRRANAVSAALLEQGVSVDRIGGVSSRGERELLVSVAGPERQNRRVTVTL 123


>gi|238893777|ref|YP_002918511.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238546093|dbj|BAH62444.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 182

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 77  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 133

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 134 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 181


>gi|227356660|ref|ZP_03841046.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
 gi|227163168|gb|EEI48099.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
          Length = 176

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +  + Q N   F         E   +L      L  +    I+I GH D          
Sbjct: 64  QLEQLKQTNIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER---GTPEY 120

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           N  L   RA +    L   GVS D++S +S +   +  +        + NRR  ++
Sbjct: 121 NIALGERRANAVKMYLQGKGVSADQLSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 175


>gi|320156881|ref|YP_004189260.1| sodium-type flagellar protein motY [Vibrio vulnificus MO6-24/O]
 gi|319932193|gb|ADV87057.1| sodium-type flagellar protein motY precursor [Vibrio vulnificus
           MO6-24/O]
          Length = 254

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     V      +   IS         ++++     
Sbjct: 101 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 156

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I E + +++++  +   T        +     LS  RA S        G++
Sbjct: 157 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLT 215

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           EDRI ++ G+   R    +        NRR+ I +   +
Sbjct: 216 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 253


>gi|262041199|ref|ZP_06014411.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041428|gb|EEW42487.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 174

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|225569968|ref|ZP_03778993.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
           15053]
 gi|225161438|gb|EEG74057.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
           15053]
          Length = 255

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           +K++    +       W   Y D +T+L+ FF++++ I++ D    + + +  NP     
Sbjct: 1   MKRRQKSPEE---GSDWMGTYGDMVTLLLCFFVLLYSISSVDQVKWENLVKSMNP---EA 54

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
              S+ + D        +    + +  +       D  +   +   +   ++
Sbjct: 55  AEPSQIVTDTMEKEGTENVPGANTTEIDQKFDEMYDNLLKMQDASGEVADIQ 106



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 10/185 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
                ++     +     E +      +  Q   +   + L    A   V  +       
Sbjct: 53  EAAEPSQIVTDTMEKEGTENVPGANTTEIDQKFDEMYDNLLKMQDASGEVADIQIAKGDG 112

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDAS--PF 277
              I+  D      FD  S +   E   VL     V+A    + + I + GHT  +    
Sbjct: 113 YQFITFKDN---VFFDGDSYVLRDEGKSVLDTFSSVIAPASDAIKEIQVLGHTSQAEPNI 169

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
            N    +  LS  R+      + +  + E +    +G+   R     D     + NRR++
Sbjct: 170 PNEVMTDRVLSATRSAVVVAYVQQKNIIEAKKLVSAGYGQFRPIDTFDTFEGRARNRRVE 229

Query: 336 ILVED 340
           IL+  
Sbjct: 230 ILITK 234


>gi|1171900|sp|P45996|OMP53_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; AltName:
           Full=Fimbrin; Flags: Precursor
 gi|305373|gb|AAA24959.1| fimbrial protein [Haemophilus influenzae]
          Length = 359

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  +   ++        + G+T+          N +LS +RA S 
Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSRKVAVAGYTNRI---GSDAFNVKLSQERADSV 302

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
               +  GV+ D IS  +G+           D +            +RR++I V   +
Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359


>gi|331641242|ref|ZP_08342377.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
 gi|331651749|ref|ZP_08352768.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
 gi|331672263|ref|ZP_08373054.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
 gi|331676423|ref|ZP_08377120.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
 gi|332282410|ref|ZP_08394823.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
           D9]
 gi|331038040|gb|EGI10260.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
 gi|331050027|gb|EGI22085.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
 gi|331070458|gb|EGI41822.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
 gi|331075916|gb|EGI47213.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
 gi|332104762|gb|EGJ08108.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
           D9]
          Length = 181

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 76  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 132

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 133 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 180


>gi|258593271|emb|CBE69610.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 224

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S    E    L +    L  +    I I GH D          N  L   R
Sbjct: 119 KDIFFDFDRSSIRTEMAKGLAENVRWLKANPTASIIIEGHCDER---GTVEYNQALGQRR 175

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           A S    L+++G+S  ++  +S +   R       +     NRR  ++++
Sbjct: 176 AMSVKSYLVEAGISARKMKVVS-YGKERPFATGHDESAWKWNRRAHLVLQ 224


>gi|281602014|gb|ADA74998.1| putative outer membrane protein [Shigella flexneri 2002017]
          Length = 160

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A          G          G        ++      + NRR+ +++
Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVI 157


>gi|110640949|ref|YP_668677.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 536]
 gi|117622932|ref|YP_851845.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli APEC O1]
 gi|215485763|ref|YP_002328194.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O127:H6 str. E2348/69]
 gi|218557654|ref|YP_002390567.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli S88]
 gi|218688532|ref|YP_002396744.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli ED1a]
 gi|227884292|ref|ZP_04002097.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 83972]
 gi|300992344|ref|ZP_07179867.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
 gi|300993167|ref|ZP_07180250.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
 gi|301051339|ref|ZP_07198162.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
 gi|306812852|ref|ZP_07447045.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli NC101]
 gi|312965177|ref|ZP_07779414.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
 gi|331656760|ref|ZP_08357722.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
 gi|331682171|ref|ZP_08382793.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
 gi|110342541|gb|ABG68778.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
           536]
 gi|115512056|gb|ABJ00131.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
           APEC O1]
 gi|215263835|emb|CAS08173.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O127:H6 str. E2348/69]
 gi|218364423|emb|CAR02103.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli S88]
 gi|218426096|emb|CAR06914.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli ED1a]
 gi|222032477|emb|CAP75216.1| Peptidoglycan-associated lipoprotein [Escherichia coli LF82]
 gi|227839044|gb|EEJ49510.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli 83972]
 gi|281177884|dbj|BAI54214.1| peptidoglycan-associated lipoprotein [Escherichia coli SE15]
 gi|294493682|gb|ADE92438.1| peptidoglycan-associated lipoprotein [Escherichia coli IHE3034]
 gi|300297001|gb|EFJ53386.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
 gi|300305361|gb|EFJ59881.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
 gi|300406697|gb|EFJ90235.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
 gi|305853615|gb|EFM54054.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli NC101]
 gi|307552592|gb|ADN45367.1| peptidoglycan-associated lipoprotein [Escherichia coli ABU 83972]
 gi|307627845|gb|ADN72149.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli UM146]
 gi|312290268|gb|EFR18151.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
 gi|312945265|gb|ADR26092.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|315287144|gb|EFU46556.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 110-3]
 gi|315292655|gb|EFU52007.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 153-1]
 gi|315299256|gb|EFU58508.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 16-3]
 gi|323191086|gb|EFZ76351.1| peptidoglycan-associated lipoprotein [Escherichia coli RN587/1]
 gi|323953133|gb|EGB49000.1| peptidoglycan lipoprotein [Escherichia coli H252]
 gi|323958485|gb|EGB54191.1| peptidoglycan lipoprotein [Escherichia coli H263]
 gi|324009565|gb|EGB78784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 57-2]
 gi|324010464|gb|EGB79683.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 60-1]
 gi|330910492|gb|EGH39002.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli AA86]
 gi|331055008|gb|EGI27017.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
 gi|331080595|gb|EGI51771.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
          Length = 173

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172


>gi|327539245|gb|EGF25868.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47]
          Length = 282

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 14/259 (5%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QNP        +          N +  ++   N++ Q     N       +Q  +  + 
Sbjct: 27  SQNPYLAGGGTSVWQPPPSTTAVNGIQAQVAELNRRVQLLDDNNRQLTTQLAQSEQQSQV 86

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                +   K L  +T   +S               +  A  R          ++     
Sbjct: 87  YRDELNLVRKQLSDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGR 146

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263
           L    +      E     + + +   +   +F + +    P    +L      L      
Sbjct: 147 LNLGGLK----VEQDGEVLRVVLPSDQ---LFAQGTGQLQPSAGAILDPTAAQLRSVFPR 199

Query: 264 EVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
           + I I G+TD +P +   A    +L+  +  +    L +  G+ E ++  ++    +  +
Sbjct: 200 QRIGIEGYTDNAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVA-QGSNNPR 258

Query: 322 IASDP--MNSANRRIDILV 338
             +      +ANRRI++++
Sbjct: 259 QDNTTPAGRAANRRIELVI 277


>gi|258626845|ref|ZP_05721652.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
 gi|262165947|ref|ZP_06033684.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
           VM223]
 gi|262171200|ref|ZP_06038878.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
           MB-451]
 gi|258580892|gb|EEW05834.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
 gi|261892276|gb|EEY38262.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
           MB-451]
 gi|262025663|gb|EEY44331.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
           VM223]
          Length = 173

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 67  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 123

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +     +  + NRR  ++
Sbjct: 124 RRAQAVAKYLEALGVQSGQLSIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 172


>gi|170681549|ref|YP_001744788.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
 gi|218701117|ref|YP_002408746.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
 gi|170519267|gb|ACB17445.1| OmpA family protein [Escherichia coli SMS-3-5]
 gi|218371103|emb|CAR18931.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
          Length = 160

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVISAP 160


>gi|221209346|ref|ZP_03582327.1| OmpA family protein [Burkholderia multivorans CGD1]
 gi|221170034|gb|EEE02500.1| OmpA family protein [Burkholderia multivorans CGD1]
          Length = 277

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 35/119 (29%), Gaps = 17/119 (14%)

Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRL 287
              +F  + S      P     L      +        I   GHTD          N  L
Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIEVVGHTDRI---GSDESNRAL 215

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
           S  RA +  + L+  G+   RI +  G    +      P            +RR+ I V
Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273


>gi|156975261|ref|YP_001446168.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
 gi|156526855|gb|ABU71941.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
          Length = 293

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++  N    V        +  S  D   T + +++        +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNVFSSCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+S 
Sbjct: 199 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSTSQS---LSERRAESLRSYFESLGLSG 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           +RI ++ G+   R    +        NRR+ I +   Q
Sbjct: 256 ERI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292


>gi|308050039|ref|YP_003913605.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307632229|gb|ADN76531.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 296

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 22/205 (10%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
             +       ++             ++  +       L+ L + +   L   ++D     
Sbjct: 85  SQVVAPQWQHRAAAPSAMRLWQWTGRQAAMEGDATPYLEALEQGLGWQLEVQISDESGYR 144

Query: 215 VLFETTRTGILISIIDQRNTPM--------------FDKSSSIPLPETIVVLQKIGEVLA 260
           +  E       ++   Q  T +              +     +P    +  L  I   +A
Sbjct: 145 LNAEPVAVRSALNQFRQCRTALVPQPFSAVRHVTLSYRSGQLLPNTAQLNQLSDIAAYVA 204

Query: 261 H--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                  + + GHTD          N  LS DRA     +L + G+S DRI ++ G    
Sbjct: 205 ADPRITEVLVDGHTDNV---GDHLANLALSRDRADEVGALLHERGISRDRI-QVRGHGER 260

Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341
              ++++       NRR+ I +   
Sbjct: 261 YPLLSNNNAQGRQHNRRVTIRLVRD 285


>gi|261837954|gb|ACX97720.1| flagellar motor rotation protein [Helicobacter pylori 51]
          Length = 255

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VLM+ GV+ +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|167374415|gb|ABZ79137.1| outer membrane protein [Riemerella anatipestifer]
          Length = 338

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 88  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 147

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   +++ C    T +           ++  ++                         
Sbjct: 148 EVAGPVENKGCPRPDTDNDGVLDKDDACPEVAGAVENSGCPCPD---------------- 191

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 192 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 251

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 308

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335


>gi|167837695|ref|ZP_02464578.1| outer membrane protein, OmpA family [Burkholderia thailandensis
           MSMB43]
          Length = 170

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYSVQDQYQSLLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     +       +   + NRR D++
Sbjct: 120 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167


>gi|126664571|ref|ZP_01735555.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
 gi|126630897|gb|EBA01511.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
          Length = 147

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +  +        + +L + G  L  +    + + GH+DA            LS  RA + 
Sbjct: 39  YGYNKHQLSAADMDMLTRHGHYLRRNVHLHVRVHGHSDAF---GTDDYGHFLSRMRASAV 95

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + L++ GV E R+  + G+   R        ++ANRR+++
Sbjct: 96  VRFLIEEGVEEQRLKAV-GWGSDRPLAT-RADHAANRRVEL 134


>gi|323491407|ref|ZP_08096592.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
 gi|323314533|gb|EGA67612.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
          Length = 203

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   SS   P  +  ++++ E L       I +RG+            N  LS  RA
Sbjct: 81  HILFANDSSEIQPAFLAQIREMSEFLEAYPSTSIELRGYASKV---GKPDYNMALSERRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            S    L+ +GV+ DR+ +I GF    L+     +  ++ NR++   V   +G
Sbjct: 138 QSVEDALLDNGVASDRV-RIVGFGDTELEAFGDDEISHAKNRKVVATVVGHKG 189


>gi|317047358|ref|YP_004115006.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
 gi|316948975|gb|ADU68450.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
          Length = 170

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   F         E   +L +    L  +     +I GH D          N  L   
Sbjct: 65  NNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGER 121

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D++S +S +   +  +        + NRR  ++
Sbjct: 122 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169


>gi|269128089|ref|YP_003301459.1| OmpA/MotB domain-containing protein [Thermomonospora curvata DSM
           43183]
 gi|268313047|gb|ACY99421.1| OmpA/MotB domain protein [Thermomonospora curvata DSM 43183]
          Length = 365

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289
           +   +F   S+         L  +   L     T  + + GHTD         DN  LS 
Sbjct: 87  QADVLFKTGSADLSAAAEKYLADVVAKLKEANVTGEVQVVGHTDDV---GEPEDNLALSK 143

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            RA +  Q +     +        G      +           NRR+ IL
Sbjct: 144 RRAEAVVQAMQPQLANTGITLIPEGKGESEPREKGTSPQARQRNRRVSIL 193


>gi|186472558|ref|YP_001859900.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184194890|gb|ACC72854.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 207

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD ++    P++ V +Q++  VLA      +++ GHTD          + RLS+ RA
Sbjct: 104 NFLFDSAT-ELAPQSAVTVQQMKAVLATWPAPHLTVVGHTD---LAGSPEYDDRLSMQRA 159

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            +  + L+K+G+   +I   +        + +     N  NRR+ I ++
Sbjct: 160 QTVAKFLIKAGIPARQIETAA-RGKREPLVHTADGVPNQMNRRVVITIQ 207


>gi|71909209|ref|YP_286796.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71848830|gb|AAZ48326.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 193

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
           ++    F + +S    ++   L  + + +       I + GHTD          N RL+ 
Sbjct: 86  KKFMLYFLEGTSELTADSKKELDGVFDEIKKRKVTDIVVIGHTDTV---GSQESNDRLAE 142

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
            RA +    L   GV    I  +SG       +  A +     NRR++I V 
Sbjct: 143 ARAKAMQAELEHLGVDAGSIK-VSGRGEREPLVKTADEVAEPLNRRVEIQVR 193


>gi|83943232|ref|ZP_00955692.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
           EE-36]
 gi|83846240|gb|EAP84117.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
           EE-36]
          Length = 665

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 79/274 (28%), Gaps = 15/274 (5%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
                  G  +++ S      ++P       K D ++                + +    
Sbjct: 389 VGSILNNGSKVVSNSGDRLVVEDPNGDLRVLKDDDALVRQAGDEVRRETFNDGSSRTTVI 448

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           +   +       +     +            L   T  E+ I   E   + P +      
Sbjct: 449 KPNGSKIVTILGRDGTVLRRINVDPQGNEYVLFDDTQAEERIVVNELPQVRPQANTLASQ 508

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +     L  ++    +   +   V+ V         +     + +   F   S+   
Sbjct: 509 QNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAPEI-----ELDAVRFATGSAAIQ 563

Query: 246 PETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           PE    L KIG  ++         VI + GHTDA         N  LS  RA +    L 
Sbjct: 564 PEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAG---YNLALSDRRAETVALALT 620

Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           +   V    +    G+    LK+ ++    ANRR
Sbjct: 621 EYFDVPPANLIT-QGYGESALKVPTETAEPANRR 653


>gi|316931816|ref|YP_004106798.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315599530|gb|ADU42065.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 334

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             NT  FD  S    P+    LQ I + L         EV  I GHTDA        DN 
Sbjct: 202 DLNTINFDTGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 258

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA SA  +L +  GV  + ++   G+    LK+ +      NRR+ I
Sbjct: 259 SLSDRRAESAAALLTQQFGVPAENLTS-QGYGEQYLKVNTQAAERQNRRVTI 309


>gi|37704654|gb|AAR01599.1| OprF [Pseudomonas sp. MFY143]
          Length = 297

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   ++   + +  ++ + + +        ++ G+TD+         N +LS  RA S 
Sbjct: 215 FDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSV---GTDAYNLKLSQRRADSV 271

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322
            Q L++ GVS  R+  + G        
Sbjct: 272 RQALVQQGVSACRVDAV-GHGKADPVA 297


>gi|157414881|ref|YP_001482137.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385845|gb|ABV52160.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747518|gb|ADN90788.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931798|gb|EFV10753.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327]
          Length = 317

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNLTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|152969309|ref|YP_001334418.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576207|ref|YP_002239637.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
 gi|288936478|ref|YP_003440537.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
 gi|290510465|ref|ZP_06549835.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
 gi|329998743|ref|ZP_08303197.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
 gi|150954158|gb|ABR76188.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206565265|gb|ACI07041.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
 gi|288891187|gb|ADC59505.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
 gi|289777181|gb|EFD85179.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
 gi|328538570|gb|EGF64674.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
          Length = 174

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|68249712|ref|YP_248824.1| outer membrane protein P5 [Haemophilus influenzae 86-028NP]
 gi|68057911|gb|AAX88164.1| Outer membrane protein P5 [Haemophilus influenzae 86-028NP]
          Length = 359

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P+    L  +   ++      +++ G+TD          N +LS +RA S 
Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342
               +  GV+ D IS  +G+           D +            +RR++I V   +
Sbjct: 303 ANYFVAKGVAADAISA-TGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359


>gi|28898249|ref|NP_797854.1| hypothetical protein VP1475 [Vibrio parahaemolyticus RIMD 2210633]
 gi|308125351|ref|ZP_05774746.2| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|28806466|dbj|BAC59738.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308113621|gb|EFO51161.1| outer membrane protein [Vibrio parahaemolyticus K5030]
          Length = 300

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   L+                   +            F   S+   P+
Sbjct: 118 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 177

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH D          N +L+ +RA    + L   GV+ 
Sbjct: 178 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 234

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           DR+                       NRR+ I V    
Sbjct: 235 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 271


>gi|182412224|ref|YP_001817290.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1]
 gi|177839438|gb|ACB73690.1| OmpA/MotB domain protein [Opitutus terrae PB90-1]
          Length = 266

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
                 + G+WK+ YADF+T +MA F+V+W I+A D     A  QYF    +  M A+ 
Sbjct: 3  RKKAAAGHGGAWKVAYADFVTAMMALFMVLW-ISAQDQKILIATSQYFQNPFQAPMLAAS 61

Query: 82 GIFDEQNPPERSSQNK 97
          G+    +   RS    
Sbjct: 62 GVLPSNSQSSRSQGPD 77



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 2/192 (1%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
               +             S +           +           L  +A     TL  L 
Sbjct: 50  QNPFQAPMLAASGVLPSNSQSSRSQGPDKGERQRAKHNQMEMAFLNSVASDFYKTLR-LD 108

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
            D   K +  + T  G+ +++ D+   P+F  +++        V+Q +   +      ++
Sbjct: 109 QDITDKPIEIQVTADGLRLTVFDRARKPVFVGNTAEFTEWGRFVMQNLSWTVDRHKFRVT 168

Query: 268 IRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
           I GHT A           W LS DRA +A + L+   V    I +++G+A  R      P
Sbjct: 169 IDGHTKAQLDLGPGEYTPWELSADRANAARRALVHYAVDPALIDRVTGYADTRPVEGESP 228

Query: 327 MNSANRRIDILV 338
              +N+RI + +
Sbjct: 229 EAESNQRITLSL 240


>gi|145635014|ref|ZP_01790720.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
 gi|145267622|gb|EDK07620.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
          Length = 355

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 208 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 267

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 268 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 323

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 324 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 355


>gi|330896311|gb|EGH28406.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 384

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      S+               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSDSADAGTAAKAPASSPAPAPVAKAAATPAPAAGAENSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K     D    K    +   +   + +  +     S +         
Sbjct: 80  WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDTKWWWPFGNDSSKDEPKALAMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLGEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283


>gi|85058865|ref|YP_454567.1| peptidoglycan-associated outer membrane lipoprotein [Sodalis
           glossinidius str. 'morsitans']
 gi|84779385|dbj|BAE74162.1| peptidoglycan-associated lipoprotein [Sodalis glossinidius str.
           'morsitans']
          Length = 170

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            S +      ++         +  + +  + + N   FD      L E   +L      L
Sbjct: 33  ESAMGAGTGMDMNGNNASSDEQARLQMQELQRNNIVYFDLDKYDILSEFAQMLDAHANFL 92

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +     ++ GH D          N  L   RA +    L   GV  D+I  I  +   
Sbjct: 93  RSNPSYKVTVEGHADER---GTPEYNIALGERRANAVKMYLQGKGVYADQI-AIVSYGKE 148

Query: 319 RLKI--ASDPMNSANRRIDIL 337
           +  +    +   + NRR  ++
Sbjct: 149 KPAVLGHDESAYAKNRRAVLV 169


>gi|303328323|ref|ZP_07358761.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
 gi|302861653|gb|EFL84589.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
          Length = 155

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                F        PE   +L+   E++     +   I G+ D          N  L   
Sbjct: 47  DARVYFAFDKFNIQPEYKDMLKTKAELMKKYPSIRVRIEGNCDDR---GTQEYNLALGER 103

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           RA +AY+ L+  GV+  ++  IS +      +    + + + NRR
Sbjct: 104 RARAAYEYLVTLGVNPSQLEMIS-YGKENPAVQGTGEAVWAKNRR 147


>gi|260062573|ref|YP_003195653.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
 gi|88784140|gb|EAR15310.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
          Length = 375

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 13/186 (6%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            EK+  +EE        ++ I   +       L ++          +   +       + 
Sbjct: 194 AEKAAMREELLAALQRRQDSIRQAEEAAEQARLLQEQEEQRLAAQREEAARKAAEAARKD 253

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
            +   + D      F   SS    E    L+ I   +  + E   SI+ H D+       
Sbjct: 254 ALKREL-DSIGGLRFAFDSSYLDAEAKAKLEAIAAFMKRNPELTFSIQAHADSR---GPE 309

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334
           + N  L+  RA      L   G+  +R+ ++ G    +L          +   ++ NRR 
Sbjct: 310 KYNQWLTERRAQRVADYLTGEGIRMERL-QVEGLGESQLLNHCSDGVRCTAAEHAVNRRG 368

Query: 335 DILVED 340
            + +  
Sbjct: 369 VVYILA 374


>gi|330971005|gb|EGH71071.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 317

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      S+               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPPPATGAENSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  S   K     D    K    S   +   + +  +     S +         
Sbjct: 80  WYWPFGSSDSAQAKPDAVADKPAAKPAAPSMVAKSETDTKWWWPFGNDSAKDEPKALPMP 139

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPIEANQKISQERAQSVAAIFRLSGLERNR 253

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283


>gi|167626141|ref|YP_001676435.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167356163|gb|ABZ78776.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 304

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 85/293 (29%), Gaps = 23/293 (7%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +++I     +    A   Y  PF K     S   F  +      S   + L+       N
Sbjct: 11  LIFICTNVTNSALAAPVNYQTPFEKAHWQFSGDQFGCEITHRVESFGTLSLNAKPGEALN 70

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
                        Q Q L     + + + Q           +            +K+   
Sbjct: 71  FALQADWLNLNNAQSQALVVPASWQAQAHQPIA--------TTSLNWFGSQAISQKNTAA 122

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                    + +  +        Q  +  +S+ L         + +L +       I + 
Sbjct: 123 FLEALEQGYTWQVNIQAADTSGYQISSSPVSTRLVANQFRLCRQQLLPKPFTYLRRIEL- 181

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRL 287
                 +F  SSS+        L  +   L   + ++   + GH DA         N  L
Sbjct: 182 ------LFAPSSSLLNNSHEQDLYAVYRYLQADSSIVEILVDGHADA---SGDHLANLVL 232

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           S +RA      L++ GVS  ++ +           +++       NRR+ + +
Sbjct: 233 SKERADEVVSRLIELGVSA-KMIQTRHHGTRAPVASNNNTEGRELNRRVTLRL 284


>gi|325579032|ref|ZP_08148988.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159267|gb|EGC71401.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 155

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 46  LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 102

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 103 LGQRRADAVKGFLAGKGVDAGKVSTVS-YGEEKPAVLGHDEAAYSKNRR 150


>gi|170769100|ref|ZP_02903553.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
 gi|170122172|gb|EDS91103.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
          Length = 175

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 70  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 126

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 127 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 174


>gi|26246711|ref|NP_752751.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli CFT073]
 gi|91209776|ref|YP_539762.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           coli UTI89]
 gi|237707296|ref|ZP_04537777.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           sp. 3_2_53FAA]
 gi|331645892|ref|ZP_08346995.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
 gi|26107110|gb|AAN79294.1|AE016757_198 Peptidoglycan-associated lipoprotein precursor [Escherichia coli
           CFT073]
 gi|91071350|gb|ABE06231.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
           UTI89]
 gi|226898506|gb|EEH84765.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
           sp. 3_2_53FAA]
 gi|331044644|gb|EGI16771.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
          Length = 181

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 76  NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 132

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 133 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 180


>gi|322421507|ref|YP_004200730.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
 gi|320127894|gb|ADW15454.1| OmpA/MotB domain protein [Geobacter sp. M18]
          Length = 1714

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSLDR 291
           F    +    E + +L+ + E +     V     GH D             DN  LS +R
Sbjct: 114 FRTGDAEITREYLELLRGVLEKMRGRNNVRLHFVGHADTQQLHGPLQEKFGDNTGLSRER 173

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  +   ++ G+  + I    G    +   ++        NRR+++ V
Sbjct: 174 AGTTAEYCQRALGLPPEAI-SYEGMGDGKPVASNSTEEGRALNRRVEVEV 222



 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 67/235 (28%), Gaps = 27/235 (11%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             Q+L   +            + + T      + L    +        +   +   S E+
Sbjct: 151 DTQQLHGPLQEKFGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGMGDGKPVASNSTEE 210

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG------------ILISIID 230
             A+ R+  ++    +I   +         +    +  RT               + + +
Sbjct: 211 GRALNRRVEVEVWYDEIGEKMVEKEVIVPAQVNRVKICRTETVCKMRYKEGLSHRVRVKN 270

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR----DNW 285
                 +D +      E    +++  + L     + +    ++D +P          D  
Sbjct: 271 LIAPLQYDAALLTVPEEFQRQVRQTLDNLKGKQNIAVKFIAYSDTTPLEARDERIYGDQL 330

Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
            LS     R A +    L  S VS     +  G        ++D     + NRR+
Sbjct: 331 GLSKAVARRVALAVQDGLKASDVS----FQSDGLGGGNPVASNDTPQGRALNRRV 381


>gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis]
          Length = 362

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L      + +       + + G+TD          N  LS 
Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            RA +    ++  GV+   ++ + G+        +
Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGN 332


>gi|253578401|ref|ZP_04855673.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850719|gb|EES78677.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 310

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 81/340 (23%)

Query: 17  IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76
           ++K+   ++       W+  Y+D +  ++  F+++  +                      
Sbjct: 1   MRKRKKSEEG--GFNVWR-SYSDMIAGVLLLFILIMCVTLFQAQK--------------- 42

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                                 + SI E   K ++  +  +    +Q +  E N    S 
Sbjct: 43  --------------------SYNESIKERDDKIALQEQYTAEILAQQSELDEKNSKLSSQ 82

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            +Q +  K  L                   +  +       L ++  L   ++K++ ++ 
Sbjct: 83  DEQLDKQKKLLAE-----------------LAAQLKEQQASLDEKTSLLATQQKKIDNII 125

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI- 255
              +  +  L  +     V  +       +++       +FD   S    E    L  I 
Sbjct: 126 GVKADVIEALQKEFSKNNVSVDIDAQTGALTLNAN---VLFDYDKSELTDEGKQELADIL 182

Query: 256 --------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGV 304
                    +        I I G+TD          N  LS  R+ +  Q L    ++ +
Sbjct: 183 PIYCKVLLQKDYKKYLAEIIIDGYTDTD---GDYDYNLELSQKRSLAVAQYLTEIRENFL 239

Query: 305 SEDRIS------KISGFAHHRLKIASDPMNSAN--RRIDI 336
           S D IS       ++G       + SD     +  RR+++
Sbjct: 240 SSDEISELQNYLTVNGHGSANPVLDSDGNVDKDASRRVEV 279


>gi|194469803|ref|ZP_03075787.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197251258|ref|YP_002145710.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|205358387|ref|ZP_02655691.2| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|238911682|ref|ZP_04655519.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194456167|gb|EDX45006.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197214961|gb|ACH52358.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|205334829|gb|EDZ21593.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 174

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|119775220|ref|YP_927960.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
 gi|119767720|gb|ABM00291.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
          Length = 178

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           + N   FD   S   P +  +L   G  L  +  V   I GH+D          N  L  
Sbjct: 72  RENVIYFDFDRSEVSPLSADILLAHGNYLLENPSVRILIEGHSDER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
            RA +  + L   GV   ++S +S +   + +  +        NRR  ++
Sbjct: 129 RRAKAVAKYLQAMGVQPAQMSIVS-YGEEKPQDLTRTDEGFSKNRRAVLV 177


>gi|300715890|ref|YP_003740693.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
           [Erwinia billingiae Eb661]
 gi|299061726|emb|CAX58842.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
           [Erwinia billingiae Eb661]
          Length = 172

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F         E   +L      L  +     ++ GH D         
Sbjct: 59  LQMQELQKNNIVYFGLDKYDIQSEFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPE 115

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            N  L   RA +    L   GVS D+IS +S +   +  +    +   + NRR  ++
Sbjct: 116 YNIALGERRATAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDESAYAKNRRAVLV 171


>gi|283833962|ref|ZP_06353703.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
           29220]
 gi|291070093|gb|EFE08202.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
           29220]
          Length = 172

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 67  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 171


>gi|323177269|gb|EFZ62857.1| ompA family protein [Escherichia coli 1180]
          Length = 127

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|187921498|ref|YP_001890530.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187719936|gb|ACD21159.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 371

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 17/187 (9%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            + ++     E   +    +         KRL D  +K + +++  +          +  
Sbjct: 162 QEAQRLTACSEVELIHAGHEAWTRDFDESKRLVDGVEKGTPSITAALEACTPPPTAAKVE 221

Query: 221 RTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPF 277
                +++        FD+      LP     L ++   L  + +V  I   G+TD    
Sbjct: 222 PLPQKVTLQADATFK-FDRGDLAGMLPAGKAKLDELIRSLKQADDVTGISIDGYTDRL-- 278

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA------ 330
                 N +LS  RA +  + L   GVS   +    G       +  +D   +A      
Sbjct: 279 -GSDSYNRQLSAKRAETVKRYLQSGGVSP--VISTRGHGKEDPVVQCNDHNRAALIACLA 335

Query: 331 -NRRIDI 336
            NRR+++
Sbjct: 336 PNRRVEL 342


>gi|6977946|emb|CAB75338.1| OMP 16 protein [Pasteurella multocida]
          Length = 130

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 21  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDER---GTPEYNIA 77

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 78  LGQRRADAVKHYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 125


>gi|302338591|ref|YP_003803797.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301635776|gb|ADK81203.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 1410

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 215  VLFETTRTGILI---SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270
            VL       + I   SII Q N   F +           VL ++ E+L         + G
Sbjct: 1271 VLVVREGNLLKIKIASIIFQPNKAEFVEDDPEVAERNRYVLDRLAEILQKYRSYQIMVEG 1330

Query: 271  HTDASPFRNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            H     + +  +           LS  RA    + L++ G+  +R+  + G    +  + 
Sbjct: 1331 HAALINWADPVKAEREEQTELMPLSQARAEKVVEALVERGIDRNRLDAV-GVGGTKPLVP 1389

Query: 324  SD--PMNSANRRIDILVEDRQ 342
                     NRR++ ++E ++
Sbjct: 1390 HSDIENRWKNRRVEFILEKKR 1410


>gi|269962899|ref|ZP_06177239.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832453|gb|EEZ86572.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 305

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F              L      +   +  I+I GHTD   ++     N  LSL RA S  
Sbjct: 62  FAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTD---YKGSLEYNEALSLRRAQSVE 118

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
             L +  +  D    ++  F   +      +D   + NRR  ++ E+ Q
Sbjct: 119 SFLKEK-LDPDHYDWEVKYFGETQPLALGKTDEDRAENRRAFVVFEEAQ 166



 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D A+   + +    A    +    E  +    I +    +   FD   S   PE +  L
Sbjct: 150 EDRAENRRAFVVFEEAQKYEEMPFCEPPKPDRKIYMAMTPH---FDFDESELKPEDLAKL 206

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISK 311
               + L      I + GHTD          N +L+  RA    + L K+ +   + + +
Sbjct: 207 DSFTDKLQGLQGSILVAGHTDQI---GSLLYNEKLAQRRASEVVKYL-KTKIDPSQFLWE 262

Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILVED 340
           +  F   +  I        + NRR  I+ ++
Sbjct: 263 VKSFGELQPVINERSKEANALNRRAFIVFKE 293


>gi|289672144|ref|ZP_06493034.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
          Length = 831

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +E        + +T S  +       +R++     ++  + +   ++ +   + +  
Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L               +++  N            +
Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGEVDDYQ 659

Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      Q     +   L+   +  +    +    +++   I  I   +  +F   
Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719

Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            +            L  I   L ++     I I GH D       A+ N ++S  RA + 
Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829


>gi|224582568|ref|YP_002636366.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224467095|gb|ACN44925.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|323129061|gb|ADX16491.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622475|gb|EGE28820.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627054|gb|EGE33397.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 182

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 77  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 133

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 134 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 181


>gi|50235079|gb|AAT70742.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   Q+  C    T             D+          +  P               
Sbjct: 171 EVAGPVQTNGCPWPDTDKDGVLDKDHACVDVAGPAENTGCPWPDP--------------- 215

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 216 -DNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|84684131|ref|ZP_01012033.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667884|gb|EAQ14352.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 315

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  SS     T   L  +   L         + GHTDA         N  +S  RA S 
Sbjct: 210 FETGSSALGDGTYDSLTDLAAYLKSHPTRRVALVGHTDAE---GPLSANIAISKRRATSV 266

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID-ILVEDR 341
            + L+   GV   ++    G  +     ++        NRR++ ILV   
Sbjct: 267 LERLVTAHGVPSSQLEA-EGIGYLSPLASNQSDEGRTFNRRVEAILVTTD 315


>gi|238797729|ref|ZP_04641223.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
           43969]
 gi|238718370|gb|EEQ10192.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
           43969]
          Length = 177

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 59  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 116

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 117 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 174

Query: 336 IL 337
           ++
Sbjct: 175 LV 176


>gi|238756015|ref|ZP_04617339.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
 gi|238705740|gb|EEP98133.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
          Length = 167

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 49  EEQARLQMQELQKNNIVYFGFDKYDIASDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 106

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 107 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 164

Query: 336 IL 337
           ++
Sbjct: 165 LV 166


>gi|86146029|ref|ZP_01064356.1| Outer membrane protein [Vibrio sp. MED222]
 gi|85836234|gb|EAQ54365.1| Outer membrane protein [Vibrio sp. MED222]
          Length = 278

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 11/207 (5%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198
            K  L    ++G   C    + ++I K+            + A      ++KRL +L  +
Sbjct: 67  AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQ 126

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    S    +       F    + I            F ++S+   P+ +  L +   +
Sbjct: 127 LDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTL 186

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L       + + GH DA+      + N  L+L RA    + L   G+   RI  +S    
Sbjct: 187 LNKHKSLDLVVTGHADAT---GTEKFNDDLALGRAKQVERYLTIFGLGAQRIKAVS-VGE 242

Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342
                  +   +   NRR+ I +   +
Sbjct: 243 TVPLFEGESDGTRLTNRRVSIEIISPK 269


>gi|302189602|ref|ZP_07266275.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 831

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +E        + +T S  +       +R++     ++  + +   ++ +   + +  
Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L               +++  N            +
Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGEVDDYQ 659

Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      Q     +   L+   +  +    +    +++   I  I   +  +F   
Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719

Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            +            L  I   L ++     I I GH D       A+ N ++S  RA + 
Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829


>gi|261839369|gb|ACX99134.1| flagellar motor protein MotB [Helicobacter pylori 52]
          Length = 255

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           S  ++    +L  +  K  +     +  + +            +    + K   +  +  
Sbjct: 38  SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255
             I+    G V + I +G            SI+   +  +F+ + S     + ++ +++I
Sbjct: 98  ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145

Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            +++    +   I++RG TD +P  +   + ++ L+ +RAY   +VL++ G + +++   
Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGANPNQL-SF 204

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
           S +        +D       N R++I 
Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|189466239|ref|ZP_03015024.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
           17393]
 gi|189434503|gb|EDV03488.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
           17393]
          Length = 224

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ V        + ++     +  +F  +SS     +   L+++
Sbjct: 75  KMDKKAAEAAKIEGAQVEKVTDTNGLAAVKVTF---ESGILFGFNSSALSNTSKASLREL 131

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L         I GHTD          N ++S DRAY+    L   GVS  +  ++ G
Sbjct: 132 AQILKEDPTTDIAIVGHTDKV---GTYEANMKVSKDRAYTVENYLQDCGVSPAQFKQVEG 188

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             +++         S NRR+DI +   +
Sbjct: 189 VGYNQ--YDDSMTASQNRRVDIYMYASE 214


>gi|238793898|ref|ZP_04637518.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
           29909]
 gi|238726801|gb|EEQ18335.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
           29909]
          Length = 177

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 59  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 116

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 117 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 174

Query: 336 IL 337
           ++
Sbjct: 175 LV 176


>gi|107026300|ref|YP_623811.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116692511|ref|YP_838044.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|170738239|ref|YP_001779499.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
           MC0-3]
 gi|105895674|gb|ABF78838.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116650511|gb|ABK11151.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
 gi|169820427|gb|ACA95009.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
           MC0-3]
          Length = 163

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   +LQ   + L         I+G+TD       +  N  L   R+ + 
Sbjct: 62  FDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDER---GTSEYNLALGQRRSQAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
              L   GV   ++  +S     +       +   + NRR D++
Sbjct: 119 ASALETLGVPATQLEAVS-LGKEKPVALGHDEEAWAQNRRADLV 161


>gi|46201524|ref|ZP_00054848.2| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 114

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD        +   +L  + E L  ++ + +I  GH D          N  L   RA + 
Sbjct: 11  FDSDRLDLNAKAKAILDGVAEELKRNSTLTAILAGHADDR---GSREYNLALGERRAEAV 67

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
              L   G   +R++ IS +   + +  S    +   NRR+ + +E 
Sbjct: 68  KTYLAVHGAPVERMAAIS-YGKEQPRDTSGTKAARAANRRVVVRLEQ 113


>gi|262149046|ref|ZP_06028189.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae INDRE 91/1]
 gi|262031146|gb|EEY49767.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae INDRE 91/1]
          Length = 133

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 27  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 83

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 84  RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 132


>gi|212637766|ref|YP_002314291.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212559250|gb|ACJ31704.1| OmpA [Shewanella piezotolerans WP3]
          Length = 301

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 8/107 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293
           +FD SSS         L  +   +   + +  +   GH DA         N  LS +RA 
Sbjct: 182 LFDTSSSHLNTVHSKDLVAVSRYIEADSTIAEVLIDGHADA---SGNRIANLVLSKERAD 238

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
               +L++ GV   R+ ++          A++       NRR+ I +
Sbjct: 239 EVASMLIELGVPA-RMIQVRHHGTRAPIAANNNQQGRELNRRVSIRL 284


>gi|149371333|ref|ZP_01890819.1| outer membrane protein A [unidentified eubacterium SCB49]
 gi|149355471|gb|EDM44030.1| outer membrane protein A [unidentified eubacterium SCB49]
          Length = 560

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 240 SSSIPLPETIVVLQKI-GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            S+    +   ++      VLA +  V   I  HTD+         N  LS  RA +   
Sbjct: 454 GSATLTAQAKNIIDTRLMPVLAQNPGVKLEIASHTDSR---GGKAANQDLSERRAQAVAV 510

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
            L   G++   +   +GF   RL          ++  ++ANRR +  +
Sbjct: 511 YLQSKGINNSLLVA-NGFGETRLLNRCADGVSCTEKEHAANRRTEFRL 557


>gi|54302262|ref|YP_132255.1| putative outer membrane protein [Photobacterium profundum SS9]
 gi|46915683|emb|CAG22455.1| putative outer membrane protein [Photobacterium profundum SS9]
          Length = 196

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           E+    ++ +  +D             AD     ++        +    +     +F   
Sbjct: 21  EEPPIAEQSQDQRDFDNDGVINARDKCADTPHSAIVDNDGCPIRVNREEENDVRVLFAND 80

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S+      +  +Q++ + L    E  I ++G+         A  N  LS  RA    + L
Sbjct: 81  SAAIPEAFLSEIQRMADFLEIYPETYIELKGYASPV---GNAEYNIGLSKRRATKVREQL 137

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343
           +  GV+  RI  I GF       A +   + N   RR+   V   +G
Sbjct: 138 IAEGVAPQRIKTI-GFGDAEPIAA-ESSEATNTLSRRVVARVIGSKG 182


>gi|148265117|ref|YP_001231823.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146398617|gb|ABQ27250.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
          Length = 1700

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            +   +   +        +           + Q L   +                     
Sbjct: 24  AETAPAETVKTAAGTREAAASGETTETHLPKDQALTPWLLDPSVFAEDQGDRTEKRRVAE 83

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD----AS 275
           +    I + +      F    +    E + +L+ + E +     V     GH D    + 
Sbjct: 84  KEVKTIKLANVVPPIRFRTGEADIPDEYVALLRGVLEKMRGRLNVRLHFVGHADPQSLSD 143

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           P +    DN  LS +RA +  +   ++ G+  + I    G    +    +      + NR
Sbjct: 144 PLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAI-SYEGVGESKPVAGNATEDGRALNR 202

Query: 333 RIDILV 338
           R+++ V
Sbjct: 203 RVEVEV 208



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 27/237 (11%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             Q L + +            + + T      + L    +        E+  +   + E 
Sbjct: 137 DPQSLSDPLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGVGESKPVAGNATED 196

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR------------TGILISIID 230
             A+ R+  ++    +I   +         +    +  R                + + +
Sbjct: 197 GRALNRRVEVEVWYDEIGEKMVEKDVIVSRQVNRVKVCRTETVCKMRYKEGHSHRVRVKN 256

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR----DNW 285
                 +D +      E +  +++    L     ++     ++D +P          D  
Sbjct: 257 LIAPMHYDAAMVTVPEEFLQQIRQALINLRGKENIVVKFIAYSDNAPLEGRDERIYGDQA 316

Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            LS     R A + +  L ++ V+     +  G    +   ++D     + NRR+++
Sbjct: 317 GLSKAVARRVALAVHDGLKEANVA----VESDGKGASQPVASNDTTQGRAMNRRVEV 369


>gi|319902507|ref|YP_004162235.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319417538|gb|ADV44649.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 223

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ +        + +S        +F  +S+    +    L+ +
Sbjct: 74  KMDKKAAEAAKIEGAQVEQITDSNGLPAVKVSF---AAGILFGFNSAALSNDAKASLRDL 130

Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L   ST  I+I GHTD          N ++S +RAYS    L   GVS  +  K+ G
Sbjct: 131 AQILKDDSTTDIAIIGHTDKV---GTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEG 187

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             + +           NRR+++ +   +
Sbjct: 188 VGYAQ--YDESKTADQNRRVEVYMYASE 213


>gi|258622513|ref|ZP_05717535.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
 gi|258585213|gb|EEW09940.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
          Length = 358

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268
               V  E       +   D+     F         E  + L+ +   +        + +
Sbjct: 207 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLV 266

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327
            G+TD       +  N  +S  RA    + L + G++E+++ ++          ++D   
Sbjct: 267 DGYTDNV---GPSVANLTISRQRAELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAT 322

Query: 328 -NSANRRIDILVEDRQ 342
             + NRR+ + +    
Sbjct: 323 GQAKNRRVTLRLVRDN 338


>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
 gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
          Length = 358

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + S    E    L ++   L+        + + G  D          N  LS
Sbjct: 230 KSDVLFAFNKSTLKAEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 345

Query: 338 VED 340
           V+ 
Sbjct: 346 VKG 348


>gi|218666977|ref|YP_002427062.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218519190|gb|ACK79776.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 183

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS  +   I VL       L H T ++ ++G+   +      + N  LS +RA S 
Sbjct: 74  FTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKT---GSYKYNLGLSQERAASV 130

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              LM  GV   RI    G++      ++        N+R+ I
Sbjct: 131 AHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 172


>gi|217973703|ref|YP_002358454.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
 gi|217498838|gb|ACK47031.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
          Length = 178

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           +++   FD   S    +   +L+  G  L     V   I GH D          N  L  
Sbjct: 72  KQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++  +  +   +    S        NRR  ++
Sbjct: 129 RRAKAVAKYLQGMGVQPTQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177


>gi|198284396|ref|YP_002220717.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248917|gb|ACH84510.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 184

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS  +   I VL       L H T ++ ++G+   +      + N  LS +RA S 
Sbjct: 75  FTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKT---GSYKYNLGLSQERAASV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
              LM  GV   RI    G++      ++        N+R+ I
Sbjct: 132 AHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 173


>gi|153832533|ref|ZP_01985200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
 gi|148871328|gb|EDL70200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
          Length = 173

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 73  FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D+IS +S +   +  +        + NRR  ++
Sbjct: 130 SNYLQALGVQADQISIVS-YGEEKPLLLGQSEEVYAKNRRAVLV 172


>gi|222824332|ref|YP_002575906.1| flagellar motor component MotB [Campylobacter lari RM2100]
 gi|222539553|gb|ACM64654.1| flagellar motor component MotB [Campylobacter lari RM2100]
          Length = 244

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 74/189 (39%), Gaps = 26/189 (13%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               L K +++    +   N  +  L K K L++ +++ ++ L   +    + +V +   
Sbjct: 60  ASNPLEKESEVHNKYSAPSNANVEELEKLKKLSITQQENIEKLKAALDQRENNIVLNLPA 119

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--G 270
           +    E  R  + I+  D ++                  L++I EVL    +   I   G
Sbjct: 120 R---VEFARASVEINSADVQD-----------------FLKRISEVLKRMPKQAQIELRG 159

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           +TDAS      + N+ L+  RA      L+  G++  ++  +S F  +    A+      
Sbjct: 160 YTDASDK--DPKRNFDLASKRAQVVADYLIARGINPAQLIVVS-FGENYPLSANKEDE-I 215

Query: 331 NRRIDILVE 339
           N R++  + 
Sbjct: 216 NNRVEFYIR 224



 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 5/185 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY----FNPFGK 74
           KK    + P     W + YADF+++L+A F+ +W I+ ++    +A++      F     
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISESNPAKTEALKTEFVKIFEFTAS 61

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
           N +     + ++ + P  ++  +++      IT+     K+ +   +++   + N    +
Sbjct: 62  NPLEKESEVHNKYSAPSNANVEELEKLKKLSITQQENIEKLKAALDQRENNIVLNLPARV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
             ++ S    ++  +D  K          +++  +   Y        K       KR Q 
Sbjct: 122 EFARASVEINSADVQDFLKRISEVLKRMPKQAQIELRGYTDASDKDPKRNFDLASKRAQV 181

Query: 195 LAKKI 199
           +A  +
Sbjct: 182 VADYL 186


>gi|187922763|ref|YP_001894405.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
           PsJN]
 gi|187713957|gb|ACD15181.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
           PsJN]
          Length = 169

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166


>gi|85708814|ref|ZP_01039880.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
 gi|85690348|gb|EAQ30351.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
          Length = 378

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S    +   +L       A+     + + GHTD          N  L+  
Sbjct: 267 PYIVFFDFDESAITADAATILDNAITAYANCGMARVMLAGHTDR---SGSVSYNMALAER 323

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S  + +   G+   RI     F   + ++ +        NRR+++ 
Sbjct: 324 RNMSVMEYMTGRGIPAARIM-GEAFGESQPRVPTADGVRELQNRRVEVT 371


>gi|254299066|ref|ZP_04966516.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 406e]
 gi|157809033|gb|EDO86203.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 406e]
          Length = 169

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 62  KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 118

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     +       +   + NRR D++
Sbjct: 119 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 166


>gi|148252154|ref|YP_001236739.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1]
 gi|146404327|gb|ABQ32833.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1]
          Length = 212

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+    +++  +Q +G  L           + GHTDA         N  LS  RA 
Sbjct: 102 FDYNSANISQKSLASVQALGRALTSPDLKGSTFVVAGHTDA---AGGDAYNQDLSERRAD 158

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           S  + L++  G++   +  + G+   +LK  S P+   NRR+ ++
Sbjct: 159 SIKRYLVEKFGIAGADLVTV-GYGKSKLKDPSQPLAEVNRRVQVV 202


>gi|322435205|ref|YP_004217417.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321162932|gb|ADW68637.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 281

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
                    FD  S    P+      +    ++      I + G+ D       A  N  
Sbjct: 170 FHAAVQDVFFDYDSIELRPDGQTAAVQAATYMSQHPNLHILVGGYCDER---GSAEYNLA 226

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
           L  +RA +A   L+ +GV+ +RI  IS +   +      ++     NRR    ++ 
Sbjct: 227 LGENRANAAKTALVNAGVAANRIRTIS-YGKEKQFCTEANEACWQQNRRAQFSIDR 281


>gi|153838882|ref|ZP_01991549.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149747673|gb|EDM58587.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 206

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           ++               ++   LQD           L         +        + +  
Sbjct: 17  QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288
             +   +F   S    P     ++++ E L       I ++G+   +     ++ N  LS
Sbjct: 77  KMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             RA +    L+  G+  +R+ +I GF    L         ++ NRR+   V   +G
Sbjct: 134 ERRAKNVRDALLGYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189


>gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE]
 gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE]
          Length = 238

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  ++    +G         ++       +   F    +   P+    L  I   ++  
Sbjct: 91  INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 150

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS +RA S     +  GV+ D IS  +G+      
Sbjct: 151 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 206

Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342
                D +            +RR++I V   +
Sbjct: 207 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 238


>gi|283784494|ref|YP_003364359.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
 gi|282947948|emb|CBG87512.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
          Length = 173

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172


>gi|237729519|ref|ZP_04560000.1| OmpA family protein [Citrobacter sp. 30_2]
 gi|226908125|gb|EEH94043.1| OmpA family protein [Citrobacter sp. 30_2]
          Length = 160

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +T +FDK+     PE+   ++++   LA +      + GHTD          N  LSL R
Sbjct: 52  DTILFDKNDYKLRPESEKQIKEMASKLAATGLNHARLDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A          + +    ++   G        ++      + NRR+ +++   
Sbjct: 109 ANVVADAWAQGANIPRTNLTT-QGLGKKYPIASNQTSKGRAENRRVAVVITTP 160


>gi|53804447|ref|YP_113694.1| OmpA family protein [Methylococcus capsulatus str. Bath]
 gi|53758208|gb|AAU92499.1| OmpA family protein [Methylococcus capsulatus str. Bath]
          Length = 215

 Score = 73.8 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS  LPE + ++      LA      +++ GH D          N  L   RA S 
Sbjct: 112 FGYDSSEVLPEYVPIVNAHAAYLASHPNVTVTLEGHCDER---GSPEYNIALGEQRARSI 168

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
              +   G S+ ++  +S F   +       +   + NRR++I+
Sbjct: 169 ANTMRFQGASDGQMQIVS-FGEEKPADPGSGEAAWAKNRRVEIV 211


>gi|238790499|ref|ZP_04634268.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
           33641]
 gi|238721443|gb|EEQ13114.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
           33641]
          Length = 168

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|308094644|ref|ZP_05890943.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308095659|ref|ZP_05907392.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308126475|ref|ZP_05910381.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308087973|gb|EFO37668.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308091063|gb|EFO40758.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308107721|gb|EFO45261.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
          Length = 284

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   L+                   +            F   S+   P+
Sbjct: 102 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 161

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH D          N +L+ +RA    + L   GV+ 
Sbjct: 162 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 218

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           DR+                       NRR+ I V    
Sbjct: 219 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 255


>gi|170691332|ref|ZP_02882497.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
 gi|170143537|gb|EDT11700.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
          Length = 169

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDDYQSLLQQHSQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166


>gi|161504089|ref|YP_001571201.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160865436|gb|ABX22059.1| hypothetical protein SARI_02187 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 174

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|325286811|ref|YP_004262601.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324322265|gb|ADY29730.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 643

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 18/185 (9%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E       S E  +  + K  +    KK S       A+ +                +++
Sbjct: 457 ELESAEDGSYEIEVPWQEKITIIASKKKYSLFRQFYTAEELKNKKQTPIYLDFADDFVVE 516

Query: 231 QRNTPM-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           +    M       F   SS   P+ I  L K   ++    E    I  HTD+   +  + 
Sbjct: 517 KEGKSMLKLNKFIFKTKSSKLTPDIIKELDKAITIIKKFPEFNLQIESHTDS---KGGSS 573

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRID 335
            N+R+S  RA +  + L+ +G+    I    G+    +           D  ++ NRR +
Sbjct: 574 SNFRISQARADNIKKYLLNNGIPSKNILYTIGYGEDHVLNKCVNGVYCIDYFHAENRRCN 633

Query: 336 ILVED 340
           I+V +
Sbjct: 634 IVVLN 638


>gi|260429336|ref|ZP_05783313.1| OmpA domain protein [Citreicella sp. SE45]
 gi|260419959|gb|EEX13212.1| OmpA domain protein [Citreicella sp. SE45]
          Length = 304

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 7/146 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +           + +        +            F+  S+     T+  L+++   L
Sbjct: 163 ETPSETPAPQQTPEAIPGGEIAARLEREGHVILRDLSFETGSASLGETTVSSLEELAAFL 222

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
            A  +  + + GHTDA         N  LS  RA +A   L   G+   ++    G  + 
Sbjct: 223 TADPSRRVLLVGHTDAV---GSLAANTELSRKRAAAAESYLRARGIPAGQLGA-QGAGYL 278

Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342
               ++        NRRI+ ++   +
Sbjct: 279 SPVASNLTPEGREENRRIEAILLPSE 304


>gi|153831565|ref|ZP_01984232.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148872075|gb|EDL70892.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 297

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +D A+   + +    A    +    E  +    I +    +   FD   S   PE +  L
Sbjct: 150 EDRAENRRAYVVFEEAQKYEEMPFCEPPKPDRKIYMAMTPH---FDFDKSQLKPEDLAKL 206

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISK 311
               + L      I + GHTD          N +L+  RA    + L K+ +   + + +
Sbjct: 207 DSFTDKLQGLQGSILVAGHTDQI---GSLSYNEKLAQRRASEVVKYL-KTKIDPSQFLWE 262

Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILVED 340
           +  F   +  I        + NRR  I+ ++
Sbjct: 263 VKSFGELQPAIDERSKEANALNRRAFIVFKE 293



 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F              L      +   +  I+I GHTD   ++     N  LSL RA S  
Sbjct: 62  FAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTD---YKGSLEYNEALSLRRAQSVE 118

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRR 333
             L +  +  D    ++  F   +      +D   + NRR
Sbjct: 119 SFLKEK-LDPDHYDWEVKYFGETQPLALGKTDEDRAENRR 157


>gi|118475629|ref|YP_892653.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
 gi|118414855|gb|ABK83275.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
          Length = 173

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 9/145 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           ++ +S     +    +        ++  I  Q     FD       P+   V+     + 
Sbjct: 32  ANKMSNNNGMSNTDTMSDAERLNALMNQIQSQVKNVYFDFDKFNIRPDMQGVVGTNASLF 91

Query: 260 AHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
             +      I + G+ D          N+ L + RA +A   L+  GVS DRI +I+   
Sbjct: 92  NQNGADSLRIMVEGNCDEW---GSDEYNYALGVKRAKTAKDALVAQGVSADRI-EITSNG 147

Query: 317 HHRLKIASDPMN--SANRRIDILVE 339
             +           + NRR +  + 
Sbjct: 148 ESKPVCTERTKACDAQNRRDEFKIL 172


>gi|16759688|ref|NP_455305.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16764119|ref|NP_459734.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29142539|ref|NP_805881.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56414134|ref|YP_151209.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|62179323|ref|YP_215740.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615017|ref|YP_001588982.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167554283|ref|ZP_02348024.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167995342|ref|ZP_02576432.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168238899|ref|ZP_02663957.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168240607|ref|ZP_02665539.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264359|ref|ZP_02686332.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467688|ref|ZP_02701525.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820116|ref|ZP_02832116.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194444000|ref|YP_002039990.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450609|ref|YP_002044783.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735900|ref|YP_002113856.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197263376|ref|ZP_03163450.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197363056|ref|YP_002142693.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198245566|ref|YP_002214719.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200390868|ref|ZP_03217479.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204929814|ref|ZP_03220835.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352013|ref|YP_002225814.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856193|ref|YP_002242844.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213027105|ref|ZP_03341552.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|213051768|ref|ZP_03344646.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213423403|ref|ZP_03356390.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213427708|ref|ZP_03360458.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213582020|ref|ZP_03363846.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213609989|ref|ZP_03369815.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
 gi|213649745|ref|ZP_03379798.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|213857528|ref|ZP_03384499.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|289827212|ref|ZP_06545932.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25298548|pir||AI0592 peptidoglycan-associated lipoprotein precursor [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419259|gb|AAL19693.1| tol protein required for outer membrane integrity [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16501981|emb|CAD05211.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29138170|gb|AAO69741.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56128391|gb|AAV77897.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62126956|gb|AAX64659.1| tol protein required for outer membrane integrity, uptake of group
           A colicins, and translocation of phage DNA to cytoplasm
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364381|gb|ABX68149.1| hypothetical protein SPAB_02777 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402663|gb|ACF62885.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408913|gb|ACF69132.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194711402|gb|ACF90623.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195629206|gb|EDX48574.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094533|emb|CAR60053.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197241631|gb|EDY24251.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288314|gb|EDY27695.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940082|gb|ACH77415.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603313|gb|EDZ01859.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320808|gb|EDZ06009.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271794|emb|CAR36628.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205321482|gb|EDZ09321.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205326989|gb|EDZ13753.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205340301|gb|EDZ27065.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343044|gb|EDZ29808.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347158|gb|EDZ33789.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707996|emb|CAR32285.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|261246012|emb|CBG23814.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267992490|gb|ACY87375.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301157340|emb|CBW16829.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312911776|dbj|BAJ35750.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085020|emb|CBY94809.1| Peptidoglycan-associated lipoprotein Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226328|gb|EFX51379.1| 18K peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322615817|gb|EFY12735.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621376|gb|EFY18232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322623633|gb|EFY20471.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322628905|gb|EFY25686.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634885|gb|EFY31615.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322636587|gb|EFY33291.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322647828|gb|EFY44308.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651360|gb|EFY47742.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322652661|gb|EFY49010.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658642|gb|EFY54903.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322664929|gb|EFY61120.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322668402|gb|EFY64558.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322670510|gb|EFY66643.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322675250|gb|EFY71326.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322679676|gb|EFY75717.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684848|gb|EFY80847.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322713794|gb|EFZ05365.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323191723|gb|EFZ76976.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323200617|gb|EFZ85692.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323202288|gb|EFZ87336.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205443|gb|EFZ90409.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212129|gb|EFZ96954.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323216148|gb|EGA00877.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221361|gb|EGA05780.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323226784|gb|EGA10975.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230998|gb|EGA15114.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234169|gb|EGA18258.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238136|gb|EGA22194.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323243571|gb|EGA27589.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323247404|gb|EGA31363.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251393|gb|EGA35265.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323256484|gb|EGA40216.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260623|gb|EGA44232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264694|gb|EGA48196.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270958|gb|EGA54393.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|332987686|gb|AEF06669.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 174

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|293397221|ref|ZP_06641494.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
 gi|291420241|gb|EFE93497.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
          Length = 179

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + N   F         E   +L      L ++     ++ GH D    
Sbjct: 61  EEQARLQMQELQKNNIVYFGLDKYDISSEFAQMLDAHATFLRNNPSYKVTVEGHADER-- 118

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +      +   NRR  
Sbjct: 119 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAV 176

Query: 336 IL 337
           ++
Sbjct: 177 LV 178


>gi|262394173|ref|YP_003286027.1| outer membrane protein [Vibrio sp. Ex25]
 gi|262337767|gb|ACY51562.1| outer membrane protein [Vibrio sp. Ex25]
          Length = 204

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 7/177 (3%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           ++           + + ++   LQD           +      +G   +    G  I   
Sbjct: 17  QQVAAEDEYDYRPVPSAEQIADLQDEDNDGVINARDMCP-GTPEGSEVDNDGCGEYIKAS 75

Query: 230 DQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
           D      +F   S    P     ++++ + L       SI  H  AS        N  LS
Sbjct: 76  DNMQVRILFANDSDEINPVFRRQVRELSDFLKEYP-TTSIELHGYASKVGGSQ-HNQDLS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             RA +  + L+   +   R+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 134 ERRARNVREALLSYNIEPSRV-RIVGFGDTHLAQQGTDEVSHALNRRVTASVVGYKG 189


>gi|315058013|gb|ADT72342.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 317

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   L   + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLIKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|237730722|ref|ZP_04561203.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
           sp. 30_2]
 gi|226906261|gb|EEH92179.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
           sp. 30_2]
          Length = 180

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 75  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 131

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 132 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 179


>gi|322433237|ref|YP_004210458.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321165629|gb|ADW71331.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 438

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
           +   +     +FD  S+   P+  V ++  G+ L    ++   I G+ D       A  N
Sbjct: 325 VIFHENVQDALFDYDSAEIRPDAKVAIEHAGKFLTEHPDIQVLIEGYADDR---GSAEYN 381

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
             L   RA +A   LM+ G+  +R+  IS +                 NRR
Sbjct: 382 LGLGAQRASAARTALMEQGIPPERLKIIS-YGKEAQVCVQQTEQCWQQNRR 431


>gi|218511064|ref|ZP_03508942.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 106

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
              SS   P+   +LQK+  V+       I I GHTDA      AR N  LS+ RA    
Sbjct: 6   AFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREVA 62

Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +   +   +  +R+  + G           P    NRR++ 
Sbjct: 63  RFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 102


>gi|90410854|ref|ZP_01218869.1| Putative sodium-type flagellar protein MotY [Photobacterium
           profundum 3TCK]
 gi|90328485|gb|EAS44783.1| Putative sodium-type flagellar protein MotY [Photobacterium
           profundum 3TCK]
          Length = 296

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +D  S      +   L +I + + +S ++  +   T +         N  LS  RA    
Sbjct: 190 YDMDSDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTKV-NQSLSERRAKKLE 248

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +  M  G+ ++RI ++  +   R    +D     + NRR+ I +
Sbjct: 249 EYFMSLGLPKNRI-QVEAYGKRRPIADNDTPIGRNKNRRVVISL 291


>gi|86747447|ref|YP_483943.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
 gi|86570475|gb|ABD05032.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
          Length = 651

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             NT  F+  S    P+    LQ I + L         EV  I GHTDA        DN 
Sbjct: 519 DLNTITFETGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 575

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA SA  +L +  GV  + ++   G+    LK+ +D     NRR+ +
Sbjct: 576 SLSDRRAESAATLLTQQFGVPAENLTS-QGYGEQYLKVPTDGPERQNRRVTV 626


>gi|91781922|ref|YP_557128.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|296162179|ref|ZP_06844975.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
 gi|91685876|gb|ABE29076.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
 gi|295887565|gb|EFG67387.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
          Length = 169

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166


>gi|225350128|gb|ACN87974.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGVFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|220918574|ref|YP_002493878.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956428|gb|ACL66812.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 242

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S   PE+   LQK+ + L  +      ++G+ D       A+ N  L   RA SA
Sbjct: 141 FAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAESA 197

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            + L   GVS   +  +S +   +   +       S NRR D  +E 
Sbjct: 198 KKYLTDLGVSSS-VDTVS-YGEEKPVCSEATEACWSKNRRDDFQIER 242


>gi|53720375|ref|YP_109361.1| OmpA family lipoprotein [Burkholderia pseudomallei K96243]
 gi|53725632|ref|YP_103661.1| OmpA family outer membrane protein [Burkholderia mallei ATCC 23344]
 gi|67643927|ref|ZP_00442670.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
 gi|76810557|ref|YP_334629.1| OmpA family outer membrane protein [Burkholderia pseudomallei
           1710b]
 gi|121601549|ref|YP_992166.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei SAVP1]
 gi|124383503|ref|YP_001028612.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei NCTC 10229]
 gi|126440722|ref|YP_001060216.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 668]
 gi|126451181|ref|YP_001081487.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei NCTC 10247]
 gi|126454443|ref|YP_001067480.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1106a]
 gi|134280344|ref|ZP_01767055.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 305]
 gi|166998277|ref|ZP_02264137.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei PRL-20]
 gi|167720991|ref|ZP_02404227.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei DM98]
 gi|167739948|ref|ZP_02412722.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 14]
 gi|167817185|ref|ZP_02448865.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 91]
 gi|167825598|ref|ZP_02457069.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 9]
 gi|167847082|ref|ZP_02472590.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei B7210]
 gi|167895666|ref|ZP_02483068.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 7894]
 gi|167904059|ref|ZP_02491264.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912316|ref|ZP_02499407.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 112]
 gi|167920273|ref|ZP_02507364.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei BCC215]
 gi|217420588|ref|ZP_03452093.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 576]
 gi|226194168|ref|ZP_03789767.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813606|ref|YP_002898057.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
 gi|242315175|ref|ZP_04814191.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1106b]
 gi|254175608|ref|ZP_04882268.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei ATCC 10399]
 gi|254180823|ref|ZP_04887421.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1655]
 gi|254191661|ref|ZP_04898164.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254194825|ref|ZP_04901255.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei S13]
 gi|254202358|ref|ZP_04908721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei FMH]
 gi|254207692|ref|ZP_04914042.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei JHU]
 gi|254258391|ref|ZP_04949445.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1710a]
 gi|254356406|ref|ZP_04972682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei 2002721280]
 gi|52210789|emb|CAH36773.1| putative OmpA family lipoprotein [Burkholderia pseudomallei K96243]
 gi|52429055|gb|AAU49648.1| outer membrane protein, OmpA family [Burkholderia mallei ATCC
           23344]
 gi|76580010|gb|ABA49485.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
           1710b]
 gi|121230359|gb|ABM52877.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei SAVP1]
 gi|124291523|gb|ABN00792.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei NCTC 10229]
 gi|126220215|gb|ABN83721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 668]
 gi|126228085|gb|ABN91625.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1106a]
 gi|126244051|gb|ABO07144.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei NCTC 10247]
 gi|134248351|gb|EBA48434.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 305]
 gi|147746605|gb|EDK53682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei FMH]
 gi|147751586|gb|EDK58653.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei JHU]
 gi|148025403|gb|EDK83557.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei 2002721280]
 gi|157939332|gb|EDO95002.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160696652|gb|EDP86622.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei ATCC 10399]
 gi|169651574|gb|EDS84267.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei S13]
 gi|184211362|gb|EDU08405.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1655]
 gi|217396000|gb|EEC36017.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 576]
 gi|225933633|gb|EEH29621.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237502905|gb|ACQ95223.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
 gi|238525396|gb|EEP88824.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
 gi|242138414|gb|EES24816.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1106b]
 gi|243065357|gb|EES47543.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           mallei PRL-20]
 gi|254217080|gb|EET06464.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
           pseudomallei 1710a]
          Length = 170

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 63  KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     +       +   + NRR D++
Sbjct: 120 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167


>gi|296534740|ref|ZP_06897115.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
 gi|296264932|gb|EFH11182.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
          Length = 97

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              T  I + GH D        + N RLS  RA +    L++ GVS   I  +  F   R
Sbjct: 20  RTQTTRIEVAGHADR---SGSPQYNQRLSQRRADAVAAELVRQGVSRSAI-TVQAFGESR 75

Query: 320 LKIASDPM--NSANRRIDILVE 339
             + +        NRR++I++ 
Sbjct: 76  PLVPTADGVREPQNRRVEIVLR 97


>gi|156973901|ref|YP_001444808.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
 gi|156525495|gb|ABU70581.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
          Length = 173

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 73  FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  ++IS +S +   +  +        + NRR  ++
Sbjct: 130 SNYLQALGVQAEQISIVS-YGEEKPLLLGQSEEVYAKNRRAVLV 172


>gi|262171113|ref|ZP_06038791.1| outer membrane protein [Vibrio mimicus MB-451]
 gi|261892189|gb|EEY38175.1| outer membrane protein [Vibrio mimicus MB-451]
          Length = 278

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G     + PE+      +  ++        D  +G  +             +  +    E
Sbjct: 15  GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +       +       +   + +   L   + + ++  KR  +L+     ++S
Sbjct: 67  SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +   N    V   +    +   +        F  +S+   P+ +  L    + L  
Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  +S+ GH D+      +  N +L++ RA    + L   G++ +RI+  S       
Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239

Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343
               +       NRR+ I +         +QG
Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271


>gi|224372379|ref|YP_002606751.1| lipoprotein [Nautilia profundicola AmH]
 gi|223589117|gb|ACM92853.1| lipoprotein [Nautilia profundicola AmH]
          Length = 195

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRA 292
             FD       P+    ++K+ E++ ++    ++   G+ D          N+ L L RA
Sbjct: 90  VYFDFDKYNIRPDQWPKVEKLAELIKNNPANYTVRIEGNCDEW---GTEEYNYALGLKRA 146

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
            S    L+K GV   +++ IS +        +        NRR
Sbjct: 147 NSVKNALIKLGVDPKKLTIIS-YGELNPVCTAHAKWCWRKNRR 188


>gi|91975488|ref|YP_568147.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91681944|gb|ABE38246.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 212

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 74/189 (39%), Gaps = 18/189 (9%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
                + +++  ++       +         ++ +  L  + + +LS    + I   +  
Sbjct: 33  ATEDQILRALAPKKPLTRSLSASRPAADPAERQFVDTLRNRTTRSLSSGEREQIA-TLAK 91

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDA 274
           +     + I+         FD +S+    +    +  +G+ L++         + GHTD+
Sbjct: 92  DKPNIDLEIT---------FDYNSANISRKAEPAVDALGKALSNPDLKGSTFVVAGHTDS 142

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
                    N  LS  RA +  +VL++  G++   +  + G+  ++ K A  P + +NRR
Sbjct: 143 I---GGDAYNQELSERRADTIKRVLVEKYGIAGSDLVTV-GYGENKPKDAVRPADPSNRR 198

Query: 334 IDILVEDRQ 342
           + ++    Q
Sbjct: 199 VQVVNMTSQ 207


>gi|307294285|ref|ZP_07574129.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
 gi|306880436|gb|EFN11653.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
          Length = 358

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S   P+   +L       ++     + + G+ D       A  N  LS  
Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADR---SGSASYNVGLSQR 303

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS----ANRRIDIL 337
           RA +    +   G+ +  +     F     ++  +  +      NRR++I 
Sbjct: 304 RADAVKAYVASKGIPDG-VITTQAFGEANPRV--ETADGVRELQNRRVEIT 351


>gi|229496999|ref|ZP_04390704.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316101|gb|EEN82029.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
           35406]
          Length = 691

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 35/147 (23%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           + +      +   S+  LPE+ V L +I ++L  + EV+  +  H D          N  
Sbjct: 529 VSEVFQDIFYAFDSADLLPESKVALDQIAKILQDNPEVVVELSSHADRV---GSDAYNLG 585

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI------------ASDP-------- 326
           LS  RA +    L   G+  D++ +  G+   R ++                        
Sbjct: 586 LSDRRARAVVDYLKGKGIPADQL-QPKGYGKSRPRVISSALHVLYPQFPEGTILDEAFVT 644

Query: 327 ---------MNSANRRID-ILVEDRQG 343
                     ++ NRR + I+++  +G
Sbjct: 645 ALSEEDKKIADALNRRTEFIVIDRVEG 671


>gi|225872180|ref|YP_002753635.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792320|gb|ACO32410.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
          Length = 245

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
           +         ++  S    P+   ++Q+    L       + I G+ D          N 
Sbjct: 133 TFEANVKPVFYNFDSYSVRPDAQAIIQQDANYLIQHPNLHVVIGGYCDDR---GSVEYNL 189

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
            L  +RA +A Q L+ +GVS DR+  +S +   +      ++    +NRR    ++ 
Sbjct: 190 ALGENRANAAKQALVSAGVSPDRLRTVS-YGKEKQFCTEQNESCWQSNRRAQFTLDQ 245


>gi|157146633|ref|YP_001453952.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
           koseri ATCC BAA-895]
 gi|157083838|gb|ABV13516.1| hypothetical protein CKO_02399 [Citrobacter koseri ATCC BAA-895]
          Length = 172

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 67  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171


>gi|114320611|ref|YP_742294.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227005|gb|ABI56804.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 324

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRA 292
             F    +         L +          +  I   GHTD+      A  N RL   RA
Sbjct: 219 VYFGFDHAGLTRTAKDALARFANQAGDDPHLQVIVAVGHTDS---AGPADYNERLGARRA 275

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            +    LM+ G++++RI ++      +  +A D     +ANRR+++
Sbjct: 276 EAVRAELMRRGIADERI-RLRSLGERQPAMAEDDGYGRAANRRVEV 320


>gi|283835685|ref|ZP_06355426.1| OmpA family protein [Citrobacter youngae ATCC 29220]
 gi|291068900|gb|EFE07009.1| OmpA family protein [Citrobacter youngae ATCC 29220]
          Length = 160

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FDK+     PE+   +Q++   LA +      + GHTD          N  LSL R
Sbjct: 52  DNILFDKNDYKLRPESEKQIQEMASKLAATGLNHARLDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A          + +    ++   G        ++      + NRR+ +++
Sbjct: 109 ANVVADAWAQGANIPRTNLTT-QGLGKKYPIASNQTSKGRAENRRVAVVI 157


>gi|311280379|ref|YP_003942610.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
 gi|308749574|gb|ADO49326.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
          Length = 173

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|289647908|ref|ZP_06479251.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 656

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +E        + +T S  +       +R++     ++  + +   ++ +   + +  
Sbjct: 365 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 424

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L               +                 +
Sbjct: 425 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVPHDTGMSAQAAGEVDDYQ 484

Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      Q     +   L+   +  +    +    +++   I  I   +  +F   
Sbjct: 485 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 544

Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            +            L  I   L ++     I I GH D       A+ N ++S  RA + 
Sbjct: 545 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 601

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 602 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 654


>gi|289803197|ref|ZP_06533826.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 128

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 23  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 79

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 80  RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 127


>gi|328676430|gb|AEB27300.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
           novicida Fx1]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|290954085|ref|ZP_06558706.1| ompA family protein [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312516|ref|ZP_06803280.1| ompA family protein [Francisella tularensis subsp. holarctica
           URFT1]
          Length = 363

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|218709511|ref|YP_002417132.1| outer membrane protein [Vibrio splendidus LGP32]
 gi|218322530|emb|CAV18689.1| Outer membrane protein [Vibrio splendidus LGP32]
          Length = 278

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 83/250 (33%), Gaps = 8/250 (3%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
               +     + +S++ +    +     + L        + Q ++   ++L ++  +   
Sbjct: 24  PEQGTGGLAESYDSINYQNSDFSPVMPDEPLGPEHGLRFDWQLAKLHLDALVQEGARWCF 83

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGV 215
                   +  N+        L  +    +  ++KRL +L  ++    S    +      
Sbjct: 84  PAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQLDYVTSQARCEPPKNEN 143

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274
            F    + I            F ++S+   P+ +  L +   +L  +    + + GH DA
Sbjct: 144 QFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTLLKENKSLDLVVTGHADA 203

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
           +        N  L+L RA    + L   G+   RI  +S           +   +   NR
Sbjct: 204 T---GTEEYNDDLALGRAKQVERYLTIFGLGVQRIKAVS-VGETVPLFEGESDGTRLTNR 259

Query: 333 RIDILVEDRQ 342
           R+ I V   +
Sbjct: 260 RVSIEVISPK 269


>gi|208780408|ref|ZP_03247749.1| OmpA family protein [Francisella novicida FTG]
 gi|208743776|gb|EDZ90079.1| OmpA family protein [Francisella novicida FTG]
          Length = 408

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 61  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 117

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 118 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 174


>gi|254369026|ref|ZP_04985039.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121947|gb|EDO66117.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKKVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|254373800|ref|ZP_04989283.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
 gi|151571521|gb|EDN37175.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|254372326|ref|ZP_04987817.1| OmpA family protein [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570055|gb|EDN35709.1| OmpA family protein [Francisella novicida GA99-3549]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|134302267|ref|YP_001122236.1| ompA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050044|gb|ABO47115.1| ompA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|119382556|gb|ABL73890.1| outer membrane protein A [synthetic construct]
          Length = 388

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+            P    + +         
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAE-NNGCPWPDADNDGV--------- 220

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 +           + +       +    +          F+ + +   PE+   L
Sbjct: 221 ------LDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|161520074|ref|YP_001583501.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|160344124|gb|ABX17209.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
          Length = 277

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287
              +F  + S      P     L      +        I + GHTD          N  L
Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDESNRAL 215

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
           S  RA +  + L+  G+   RI +  G    +      P            +RR+ I V
Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273


>gi|118496956|ref|YP_898006.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
 gi|194324185|ref|ZP_03057959.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
 gi|118422862|gb|ABK89252.1| OmpA family protein [Francisella novicida U112]
 gi|194321632|gb|EDX19116.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|57339664|gb|AAW49819.1| hypothetical protein FTT0831 [synthetic construct]
          Length = 452

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 96  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 152

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 153 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 209


>gi|89255751|ref|YP_513113.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
 gi|115314245|ref|YP_762968.1| OmpA family protein [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167009203|ref|ZP_02274134.1| possible OmpA family protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|169656511|ref|YP_001427779.2| OmpA family protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187931246|ref|YP_001891230.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254367123|ref|ZP_04983156.1| outer membrane protein ompA [Francisella tularensis subsp.
           holarctica 257]
 gi|89143582|emb|CAJ78765.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
 gi|115129144|gb|ABI82331.1| possible OmpA family protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134252946|gb|EBA52040.1| outer membrane protein ompA [Francisella tularensis subsp.
           holarctica 257]
 gi|164551579|gb|ABU60823.2| OmpA family protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187712155|gb|ACD30452.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|56707940|ref|YP_169836.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110670411|ref|YP_666968.1| OmpA family protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457021|ref|ZP_03665494.1| OmpA family protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370429|ref|ZP_04986434.1| OmpA family protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874744|ref|ZP_05247454.1| ompA family protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|54114377|gb|AAV29822.1| NT02FT0718 [synthetic construct]
 gi|56604432|emb|CAG45464.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320744|emb|CAL08847.1| OmpA family protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568672|gb|EDN34326.1| OmpA family protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840743|gb|EET19179.1| ompA family protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159125|gb|ADA78516.1| OmpA family protein [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 417

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286
           FD  S     +   VL K+   L    T   +I+G+         TD          N R
Sbjct: 70  FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           LS +RA S  + L+  G+       I    +      +D     + N+R++I ++ R
Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183


>gi|332519351|ref|ZP_08395818.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045199|gb|EGI81392.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 636

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 23/293 (7%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           +   D    K I+    P     +  +    D        +      S  E    +    
Sbjct: 356 LGGMDVFYTKEIDGKMAPVRNVGIPVNSNGDDFAFHINEETGEGFVSSNREGGKGDDDIY 415

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +I     +     L       + ++      ++   DS+      K+T+ E  +      
Sbjct: 416 QIKK--IQPLCDVLIVATIVDNKTKAPIAGASASLVDSKGNVLSTKTTNAEGKVEYIVEC 473

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 +  +   +  K L      +      L  D I K +  E               
Sbjct: 474 DTDTELQVTMQDYESNK-LAIAGDDVEEVAVELALDPIEKIIEVEEVVL----------R 522

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD   S    +    L  + +V+    ++ I    HTD    R   + N  LS  RA
Sbjct: 523 PIYFDYDKSNITAKAAFELDNLVQVMNKYPDMVIYATSHTD---IRASNKYNDALSDRRA 579

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340
            +  Q ++  G+   RI   +G     L +      ++  +  NRR +  +  
Sbjct: 580 KTTVQYIISKGIDATRI-SGAGKGERELAVDCGTNCTEEQHQLNRRSEFKILS 631


>gi|290957838|ref|YP_003489020.1| hypothetical protein SCAB_33721 [Streptomyces scabiei 87.22]
 gi|260647364|emb|CBG70469.1| putative secreted protein [Streptomyces scabiei 87.22]
          Length = 206

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 19/210 (9%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               +     +     +L   +    D  +      +    E     P  K    A    
Sbjct: 8   PRTTVLAGAVAVLAALTLAAPAHAADDPSEPPGTVTTSPPPEVDANSPALKLAQGATLAP 67

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            ++ D+   +         ++  + V F              +   +F K+S+   P+  
Sbjct: 68  AKVLDIKSVVEDLGGEERREDTNENVTFAL------------QAEVLFPKNSAKLNPQAR 115

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +Q I E +       + + G TD             LS  RA + + +L  + +  + 
Sbjct: 116 SRIQTIAEEIKKQDAVKVRVFGFTDNL---GSYAHGLTLSKKRAEAVHDLL-ATDLDGNV 171

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336
             ++ G++       +        NRR+++
Sbjct: 172 TFEVRGYSEDYPIADNATEEGRKKNRRVEV 201


>gi|158318192|ref|YP_001510700.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
 gi|158113597|gb|ABW15794.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
          Length = 186

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD +S+   PE    L      +      + + G++D          N  LS  RA + 
Sbjct: 89  LFDANSADLRPEAATALAGTVPQIREHDGRVQVVGYSDGL---GTTEHNLDLSRRRAVAV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              L+   +    + ++               +++ RR++I++ 
Sbjct: 146 QAYLVSQDIPAS-LLEVEAKGEQG--ATDGVADASRRRVEIVLR 186


>gi|325274583|ref|ZP_08140640.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
 gi|324100285|gb|EGB98074.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
          Length = 146

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRL 320
           + L+  GVS  ++ ++  +   R 
Sbjct: 124 RYLVLQGVSPAQL-EVVSYGEERP 146


>gi|148980294|ref|ZP_01815981.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
           bacterium SWAT-3]
 gi|145961313|gb|EDK26623.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
           bacterium SWAT-3]
          Length = 299

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F + +          +  I  ++        I I G+TD       +  N +LS  R   
Sbjct: 195 FQQGAVDLTEGQKRTINDISTLVKRDSRIIKILIDGYTDN---SGDSVANLQLSKQRGSD 251

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             Q  M +GVS  ++ +I G      K  +        NRR++I +  +
Sbjct: 252 VAQWFMGNGVS-KQMIEIRGHGDRYPKYDNTTQQGRDKNRRVEIRLVRK 299


>gi|331018731|gb|EGH98787.1| OmpA domain-containing protein [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 830

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNLDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVRCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|259090537|gb|ACV91891.1| OprL [Pseudomonas fluorescens]
 gi|259090541|gb|ACV91893.1| OprL [Pseudomonas fluorescens]
          Length = 156

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 66  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA 323
           + L+  GVS  ++  +S +   R    
Sbjct: 123 RYLVLQGVSPAQLELVS-YGKERPVAT 148


>gi|240948744|ref|ZP_04753116.1| lipoprotein Plp4 [Actinobacillus minor NM305]
 gi|240296960|gb|EER47538.1| lipoprotein Plp4 [Actinobacillus minor NM305]
          Length = 282

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  + + + G+TD          N  LS  R
Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAQQVKVAGYTDRL---GSVNYNLDLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI-----LV 338
           A      L++ GV+  +I  + G+       A D  +          NRR++I     ++
Sbjct: 198 ANMVKARLVQQGVTA-QIEAV-GYGKANQVKACDGESGQALRDCLRPNRRVEISANGGVL 255

Query: 339 EDRQG 343
              +G
Sbjct: 256 TQSEG 260


>gi|170739168|ref|YP_001767823.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168193442|gb|ACA15389.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 213

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI---RGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+   P+ + V++ +G  L+      S+    GHTDA         N  LS  RA 
Sbjct: 102 FAYNSAQIGPKALPVVKVLGATLSRPQMSGSVILIVGHTDA---NGSDHGNQVLSERRAE 158

Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           +  Q ++   GV    +  + G+    LK A+ P    NRR+
Sbjct: 159 AVKQYIVHNYGVPAANLVAV-GYGKRHLKDAARPTAPENRRV 199


>gi|114776804|ref|ZP_01451847.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
 gi|114552890|gb|EAU55321.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
          Length = 219

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 57/203 (28%), Gaps = 16/203 (7%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                            +     P      I   K    L+     +   L     D + 
Sbjct: 14  DANPDGTPLHSSAPQTVQNQQAAPVSHTPSIDDGKTNDELRAQNDAMKQELKAAE-DELA 72

Query: 213 KGVLFETTRTGILISIIDQR-NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IR 269
           +           ++   D+      F    +   P+T  VL  I          +   IR
Sbjct: 73  RLQKISHKALPAMLEPHDRLWARISFKSGQTSVEPKTRKVLTAIAGKFLAHPGKMHLEIR 132

Query: 270 GHTDASPFRN-----IARDN----WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           G++D  P          R N      L+  RA +   V++ +G+ +  +   +G      
Sbjct: 133 GYSDDEPIGGYKHSHKPRHNLKSLQALTQARADAVAAVMIDAGIPQT-LVHATGMGATGF 191

Query: 321 KIASDPMNSA--NRRIDILVEDR 341
              ++       NRR+DI +   
Sbjct: 192 ISDNNTAEGRSKNRRVDIHLVTD 214


>gi|330991879|ref|ZP_08315828.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
 gi|329760900|gb|EGG77395.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
          Length = 156

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S    +    L K    LA   +  + I G+ D          N  L   R
Sbjct: 51  DRVLFALKQSTLSSDAKAELDKQAAWLAKYPQVHVQIAGNCDDR---GTEEYNIALGERR 107

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANR 332
           A +A+  L+  GV   R++ IS +   R       +   + NR
Sbjct: 108 ANAAHDYLVAKGVDASRMTTIS-YGKDRPTAVGDDEASWAQNR 149


>gi|296448590|ref|ZP_06890462.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
 gi|296253908|gb|EFH01063.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
          Length = 454

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 14/123 (11%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             +T  FD  S    P+    L  I   L        +EV  + GHTDA+       DN 
Sbjct: 329 DIDTITFDSGSWTVAPDQAQRLSVIATALNQAIRNNPSEVFLVEGHTDAT---GSDVDNL 385

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL----VED 340
            LS  RA S   +L +   V  + ++   G+     K+     +  NRR+ +     + +
Sbjct: 386 SLSDRRAQSVATLLTRDFDVPAENLTT-QGYGEQYPKVDVQGPSRENRRVTVRRITPLLN 444

Query: 341 RQG 343
            QG
Sbjct: 445 GQG 447


>gi|213970767|ref|ZP_03398891.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
 gi|301383000|ref|ZP_07231418.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059103|ref|ZP_07250644.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302133343|ref|ZP_07259333.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924439|gb|EEB58010.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
          Length = 830

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  + +   ++     + +     +   +    LS +Q+ +     L            +
Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
               K+I            +     +                 +  +  +    +    T
Sbjct: 639 RQTGKTITANAEAGSNLDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
           ++   I  I   +  +F    +       E    L  I   L  +  +  I   GH D  
Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330
                 + N ++S  RA +    L+  GV  + +  + G    +  +  D          
Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVRCDMQQPRAQLIQ 814

Query: 331 ----NRRIDILVED 340
               NRR++I V  
Sbjct: 815 CLEPNRRVEIEVRA 828


>gi|186477205|ref|YP_001858675.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
 gi|184193664|gb|ACC71629.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
          Length = 169

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDDYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV +  +  +S     + +     +   + NRR D++
Sbjct: 124 RRSLSLLGVPDSEMEAVS-LGKEKPQATGHDEASWAQNRRADLV 166


>gi|307728550|ref|YP_003905774.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
 gi|323524837|ref|YP_004226990.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
 gi|307583085|gb|ADN56483.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
 gi|323381839|gb|ADX53930.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
          Length = 169

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + L   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166


>gi|153836574|ref|ZP_01989241.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149750172|gb|EDM60917.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 284

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +++RL  L +++   L+                   +            F   S+   P+
Sbjct: 102 QRRRLNQLEQQLDYVLTQTACTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 161

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            +  L +   +L       + + GH D          N +L+ +RA    + L   GV+ 
Sbjct: 162 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 218

Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           DR+                       NRR+ I V    
Sbjct: 219 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 255


>gi|91792716|ref|YP_562367.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91714718|gb|ABE54644.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 209

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 16/158 (10%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID---------QRNTPMFDKSSSIP 244
           +L+ +    +     D++ +      T+  +L    +               F+ + S  
Sbjct: 53  ELSVQQEPEIEPSDFDSMEQVQTAAITQNCVLDETSEFNLSACDSIDIAPVYFEFAKSQV 112

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSG 303
           L     +L+KI  +   S   I++ GHTD          N  LSL RA +   VL+ + G
Sbjct: 113 LQTQKPLLKKIAMLANQSGAKITLVGHTD---IIGSEAFNQNLSLKRAMNVSAVLVAEYG 169

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +    I    G         +   N    NRR++I + 
Sbjct: 170 LMASDIHYY-GVGSTEPADDNATANGRQANRRVEITIT 206


>gi|323496851|ref|ZP_08101888.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
 gi|323318110|gb|EGA71084.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
          Length = 293

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 91/293 (31%), Gaps = 17/293 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           + +    +     +Y     ++          E             +       K ++D 
Sbjct: 13  LASFASQSFAMDVRYVATPQQSQWQMITNTPLECRMVHPIPNYGDAVFSSHASKKINLDF 72

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           ++       + + +                + +  R  ++             +++ E  
Sbjct: 73  ELKMKRPMGKTRDVSLISMPPVWRPGEGANRITNIRFFQQFDGYVGGQTAWGILSELEKG 132

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P  S ++  +   +  +      +SS L     +     +      +   I+      
Sbjct: 133 RYPTFSYQEWQSRDERVEVA-----LSSVLFQSSYNVFSDCIANLLPYSFEDIAFTILH- 186

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDR 291
              +D++S     ++   L +I E + H+ ++  +    +TDA   ++ +     LS  R
Sbjct: 187 ---YDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDTKSAS---QNLSERR 240

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 241 AEVLQEYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLGRTQ 292


>gi|332520148|ref|ZP_08396612.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332044707|gb|EGI80901.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 636

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 23/293 (7%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           +   D    K I+    P     +  +    D        +      S  E    +    
Sbjct: 356 LGGMDVFYTKEIDGKMAPVRNVGIPVNSNGDDFAFHINEETGEGFVSSNREGGKGDDDIY 415

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +I     +     L       + ++      ++   DS+      K+T+ E  +      
Sbjct: 416 QIKK--IQPLCDVLIVATIVDNKTKAPIAGASASLVDSKGNVLSTKTTNAEGKVEYIVEC 473

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 +  +   +  K L      +      L  D I K +  E               
Sbjct: 474 DTDTELQVTMQDYESNK-LAIAGDDVEEVAVELALDPIEKIIEVEEVVL----------R 522

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD   S    +    L  + +V+    ++ I    HTD    R   + N  LS  RA
Sbjct: 523 PIYFDYDKSNITAKAAFELDNLVQVMNKYPDMVIYATSHTD---IRASNKYNDALSDRRA 579

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340
            +  Q ++  G+   RI   +G     L +      ++  +  NRR +  +  
Sbjct: 580 KTTVQYIISKGIDATRI-SGAGKGERELAVDCGTNCTEEQHQLNRRSEFKILS 631


>gi|301064490|ref|ZP_07204897.1| OmpA family protein [delta proteobacterium NaphS2]
 gi|300441407|gb|EFK05765.1| OmpA family protein [delta proteobacterium NaphS2]
          Length = 275

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +   PE    L +   V   +    + ++G+TD        + N  LSL R
Sbjct: 176 GDVLFDFDKANIKPEFYGQLDEAARVFEMNPGLKVEVQGNTDNV---GTYKYNMGLSLRR 232

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           A +    L+K GV   R+    G A H     +D     
Sbjct: 233 ANAVLNYLVKRGVDRSRL-AARGSATHVP-SHNDTPEGR 269


>gi|216263832|ref|ZP_03435826.1| outer membrane protein [Borrelia afzelii ACA-1]
 gi|215979876|gb|EEC20698.1| outer membrane protein [Borrelia afzelii ACA-1]
          Length = 389

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K +  E    GI +S+  +     F   S   L +    L  I
Sbjct: 250 DNFIETEVENYIQEKKIKAISVEKNTKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L       I I GHT+      +  +   LS  RA +    L+K  +         G
Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKG 361

Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340
           +   + K   S P+ + NRR++I + +
Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388


>gi|111114988|ref|YP_709606.1| outer membrane protein [Borrelia afzelii PKo]
 gi|110890262|gb|ABH01430.1| outer membrane protein [Borrelia afzelii PKo]
          Length = 389

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K +  E    GI +S+  +     F   S   L +    L  I
Sbjct: 250 DNFIETEVENYIQEKKIKAISVEKNTKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L       I I GHT+      +  +   LS  RA +    L+K  +         G
Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKG 361

Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340
           +   + K   S P+ + NRR++I + +
Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388


>gi|258625023|ref|ZP_05719945.1| Outer membrane protein [Vibrio mimicus VM603]
 gi|258582691|gb|EEW07518.1| Outer membrane protein [Vibrio mimicus VM603]
          Length = 278

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G     + PE+      +  ++        D  +G  +             +  +    E
Sbjct: 15  GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +       +       +   + +   L   + + ++  KR  +L+     ++S
Sbjct: 67  SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +   N    V   +    +   +        F  +S+   P+ +  L    + L  
Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  +S+ GH D+      +  N +L++ RA    + L   G++ +RI+  S       
Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239

Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343
               +       NRR+ I +         +QG
Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271


>gi|167648381|ref|YP_001686044.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
 gi|167350811|gb|ABZ73546.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
          Length = 185

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 7/112 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +   +I+      FD        +    L    + L       + I G+ D         
Sbjct: 67  VQDFVINIGERIYFDTDQYDIRSDAQPTLAAQAQWLNRYPAVRVRIEGNADER---GTRE 123

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
            N  L   RA +  + L+  GVS  RI  +S +   +     + +   + NR
Sbjct: 124 YNLALGARRANAVREFLVAQGVSGSRIETLS-YGKEKPIDGGSGEESWAKNR 174


>gi|50235067|gb|AAT70736.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +  P               
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENTGCPWPDP--------------- 215

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F  + +    E+   L
Sbjct: 216 -DNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGALKGIFFTFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|258621416|ref|ZP_05716450.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
 gi|258586804|gb|EEW11519.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
          Length = 173

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 67  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 123

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +     +  + NRR  ++
Sbjct: 124 RRAQAVAKYLEALGVQSGQVSIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 172


>gi|4704601|gb|AAD28174.1|AF104303_1 fibronectin binding protein [Campylobacter jejuni]
          Length = 287

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 206 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 262

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK 321
              L K GV + RI  + G+     +
Sbjct: 263 ANELEKYGVEKSRIKTV-GYGQDNPR 287


>gi|4704599|gb|AAD28173.1|AF104302_1 fibronectin binding protein [Campylobacter jejuni]
          Length = 287

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +   P     +++I +VL  +    +I  GHTD          N +LS  RA S 
Sbjct: 206 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 262

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK 321
              L K GV + RI  + G+     +
Sbjct: 263 ANELEKYGVEKSRIKTV-GYGQDNPR 287


>gi|27375632|ref|NP_767161.1| hypothetical protein blr0521 [Bradyrhizobium japonicum USDA 110]
 gi|27348769|dbj|BAC45786.1| blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 73/232 (31%), Gaps = 11/232 (4%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           D   G T            I  ++   +            E         D +       
Sbjct: 493 DTVGGDTRTVVIRPDGSEIITVVAPDGRLLRRIRRDPGGRELIIIDNSYRDPQSVGGFYV 552

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230
           +   P ++      +   +         +     +   N    +        I + +   
Sbjct: 553 DAPPPVVNIPYDRYIVDAEEASPDVIYQTMEAPPVQRINRRYTLDEIRYSPNIRMQMPSI 612

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-----VISIRGHTDASPFRNIARDNW 285
             NT  F+  S    P+    LQ I + L  + +     V  I GHTDA        DN 
Sbjct: 613 DVNTITFETGSWTIPPDQAAKLQVIADGLNRAIQANPRVVFLIEGHTDAV---GNEVDNL 669

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA SA ++L +  GV  + ++   G+    LK  +   ++ NRR+ +
Sbjct: 670 SLSDRRAQSAAELLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSAINRRVTV 720


>gi|218677868|ref|ZP_03525765.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
           894]
          Length = 145

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +        +E   I GHTDA       + N 
Sbjct: 24  DLDTVTFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAV---GTDQSNL 80

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL    G+  + +    G+    LK+ +      NRR+ I
Sbjct: 81  VLSDQRAESVANVLSDVYGIPPENL-ATQGYGERYLKVNTSGPEQENRRVTI 131


>gi|325102935|ref|YP_004272589.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324971783|gb|ADY50767.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 668

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 12/116 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + N   +D        +    L K+   +       I +R HTD+      A  N  LS 
Sbjct: 539 KLNNIYYDFDKYTIRKDAEPELNKVLAFMKKMPYVNIELRAHTDSR---GKASYNMLLSE 595

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
           +RA SA   L+  G    R+    GF   +L          +   +  NRR +  V
Sbjct: 596 NRANSAKLFLLNGGADGSRLLA-KGFGETQLLNHCKDGVKCTKEEHQLNRRTEFKV 650


>gi|241667092|ref|YP_002985176.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862549|gb|ACS60214.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 652

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 63/239 (26%), Gaps = 14/239 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
             +     +  +  +          + + +++   E   +S                ++ 
Sbjct: 415 AQEMMAANQPVADYEPLLVAADSPQVLWQASATLGEIYFSSRRFADAAADYQQAIEIIKN 474

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
                +      +S     A + +    +               +   GVL       + 
Sbjct: 475 ETRTPKAPPAETISDLIQRAAQARILAANPTSDNPEGSFVPAEKDHRSGVLGGIYSENVR 534

Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283
            I  +       FD + S          +++ E L       I + GHTD          
Sbjct: 535 GIVPVSIPVPITFDFNKSSFTSIGTEAAEELLEALKEQKPGRIILIGHTDRR---GGDDY 591

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRID 335
           N +LS  RA +    L  +G+         G         +          ++ NRR++
Sbjct: 592 NQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 648


>gi|320355393|ref|YP_004196732.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320123895|gb|ADW19441.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 201

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    + I  ++  G  L  ++   + I G+TD          N  L   RA SA
Sbjct: 100 FDYDHSGIRSDQIPSMEHNGGYLKSNSSARVLIEGNTDNR---GTNEYNLALGERRAMSA 156

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
              L++ G+ E RI  +S +   R        +  + NRR D ++E
Sbjct: 157 KTYLIEFGIEESRIRTVS-YGEERPLFNGGSEDDYAHNRRDDFILE 201


>gi|89111206|dbj|BAE80295.1| outer membrane protein OmpA [Acidovorax avenae subsp. avenae]
          Length = 379

 Score = 73.5 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LP++   ++++ ++L   T   +++ G+TD +     A  N  LS  RA + 
Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDTSLKLAVNGYTDNT---GDAAHNKTLSEGRAKAV 333

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              +   G+   R+S   GF        +      + NRR++++
Sbjct: 334 AAAVAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376


>gi|327393167|dbj|BAK10589.1| peptidoglycan-associated lipoprotein precursor Pal [Pantoea
           ananatis AJ13355]
          Length = 174

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   F         +   +L +    L  +     +I GH D          N  L   
Sbjct: 69  NNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER---GTPEYNIALGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D++S +S +   +  +        + NRR  ++
Sbjct: 126 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173


>gi|315223455|ref|ZP_07865312.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
 gi|314946628|gb|EFS98619.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
          Length = 397

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 11/227 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           +K  +     S N ++ +Q     +    N    +H K++    + K  +L +      +
Sbjct: 168 SKQQLTYDTKSANGQQGFQGNHFTLTAGLNIALGKHGKHADWAAASKKDELEEVAQRVAN 227

Query: 167 INKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +          ++  + K+          ++   ++              V  +     +
Sbjct: 228 LENNVADLKSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADL 287

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I        FD +SS P   +   +  + + +  +    I+I G+ D        + 
Sbjct: 288 ---IRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADEL---GGTQY 341

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           N  LS  RA +   +L+K+G+   RI+   G         +    + 
Sbjct: 342 NQTLSQKRADAVKDLLVKAGIDGSRITA-EGKGVDASVDKNSS-RAR 386


>gi|283954121|ref|ZP_06371646.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794400|gb|EFC33144.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 317

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++T   
Sbjct: 45  KEIKDNLNRQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITSYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +         +FDK S +   E    L+K              
Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 ILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFLNGVEDKDKSRRIEI 297


>gi|270263786|ref|ZP_06192055.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
           odorifera 4Rx13]
 gi|270042670|gb|EFA15765.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
           odorifera 4Rx13]
          Length = 180

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + N   F         E   +L      L ++     ++ GH D    
Sbjct: 62  EEQARLQMQELQKNNIVYFGLDKYDVSSEFAEMLDAHSAFLRNNPSYKVTVEGHADER-- 119

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 120 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 177

Query: 336 IL 337
           ++
Sbjct: 178 LV 179


>gi|225350140|gb|ACN87980.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDTDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|224812457|gb|ACN64871.1| OmpA family lipoprotein [Burkholderia pseudomallei]
          Length = 177

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S     +   +LQ+  + L    +  I I+G+TD       +  N  L   
Sbjct: 70  KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 126

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           RA +  + L   GV + ++  +S     +       +   + NRR D++
Sbjct: 127 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 174


>gi|220922989|ref|YP_002498291.1| type IV / VI secretion system protein, DotU family
           [Methylobacterium nodulans ORS 2060]
 gi|219947596|gb|ACL57988.1| type IV / VI secretion system protein, DotU family
           [Methylobacterium nodulans ORS 2060]
          Length = 489

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 8/130 (6%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              V  E T + +++ +       +F    +    E   +LQ++  ++A     I I GH
Sbjct: 361 AGRVTVEETNSQVVVRLA----AALFAPGDAAVTAEFRPLLQRVAGLIAREPGPIRIVGH 416

Query: 272 TDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
           TD++P R      N+ LS+ RA +    +  +    +R+ ++ G         +D     
Sbjct: 417 TDSAPVRNGRFASNFDLSVARAKAVAAAIRAAPEKPERL-EVEGKGPDAPVAPNDTVEGR 475

Query: 329 SANRRIDILV 338
           + NRR++IL+
Sbjct: 476 ARNRRVEILI 485


>gi|30314434|gb|AAP15426.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
          Length = 149

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + +   +   + NRR D++
Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 146


>gi|30314436|gb|AAP15427.1| outer membrane lipoprotein precursor [Burkholderia anthina]
          Length = 150

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|58040120|ref|YP_192084.1| peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
 gi|58002534|gb|AAW61428.1| Peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
          Length = 159

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   ++ + S    E    L K    LA   +V I + G+ D          N  L   R
Sbjct: 54  DRVFYELNQSQLSEEARATLDKQVAWLAKYPQVSIQVAGNCDDR---GTEEYNIALGQRR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           A +A   L+  GVS  RI+ IS +   R     D     + NR
Sbjct: 111 ANAARDYLVAKGVSASRITTIS-YGKDRPTADGDDEQSWAQNR 152


>gi|237737904|ref|ZP_04568385.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
 gi|229419784|gb|EEO34831.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
          Length = 1511

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 209  DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVI 266
            +++    +  +++    I++   R    F+   +     +  V++K  E +        I
Sbjct: 1381 NDLNPMNIVSSSKKDSSITL---RTKSYFEFDKAELNNNSKKVIEKFSEEINRDNLKGKI 1437

Query: 267  SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
             I G+TD       +  N +LSL+RA    + L K   + D   +I G         ++ 
Sbjct: 1438 KIEGYTDNV---GKSSYNEKLSLERATKVAEELKKQVKNSDTEYEILGKGASNPIGNNET 1494

Query: 327  M--NSANRRIDILVEDR 341
                + NRR++I  +++
Sbjct: 1495 EVGRAKNRRVEIEFQEK 1511


>gi|154149070|ref|YP_001406274.1| Omp18 [Campylobacter hominis ATCC BAA-381]
 gi|153805079|gb|ABS52086.1| Omp18 [Campylobacter hominis ATCC BAA-381]
          Length = 154

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 9/120 (7%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNI 280
           +   I  + NT  FD             +     +   +      + I G+ D       
Sbjct: 37  LASKIQSEVNTVYFDFDKFNIKTSEQSKISNNAALFNQAGAESLTVKIEGNCDEW---GT 93

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
              N+ L L RA +A   L+K GV+E+R+  +  +    L          + NRR +  V
Sbjct: 94  DEYNYALGLKRATAAKDALVKQGVAENRL-SVVSYGESNLVCTDKTKACDAQNRRDEFKV 152


>gi|116329456|ref|YP_799176.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329940|ref|YP_799658.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116122200|gb|ABJ80243.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123629|gb|ABJ74900.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 195

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                 +     +  A++ S+  +  V  N  + +              D    P F   
Sbjct: 22  SSAEKKEESAAPEPSAQEQSAAANRSVDVNSPEAIADSLNEKLKDFRYPDGITRPGFSYK 81

Query: 241 SSIPLP-ETIVVLQKIGEVLAHSTEVI------SIRGHTDAS---PFRNIARDNWRLSLD 290
            +   P +     +    V+      +       I GHTDA          + N   S  
Sbjct: 82  KADVNPGDFSGWSKVNVPVIKEGLGKLPDSYALEITGHTDAVGPEQAEGAKKGNIFYSEL 141

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           RA +  Q L+K G+  +RI    G          D  ++ NRR+  
Sbjct: 142 RANAVKQALIKQGIPANRIIA-KGAGSSEPVSGLDAKDAKNRRVTF 186


>gi|50235081|gb|AAT70743.1| OmpA [Riemerella anatipestifer]
 gi|50235097|gb|AAT70751.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPAENNGGPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       R+              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPRSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|33593045|ref|NP_880689.1| putative lipoprotein [Bordetella pertussis Tohama I]
 gi|33563420|emb|CAE42299.1| putative lipoprotein [Bordetella pertussis Tohama I]
 gi|332382458|gb|AEE67305.1| putative lipoprotein [Bordetella pertussis CS]
          Length = 182

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270
            +GV     +  + I+++      +FD   +  L      L+ I E++    T +++I G
Sbjct: 69  HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLRDIAELIKSPATGIVAIEG 125

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           HTD+   +     N  LSL RA +  Q L   GV   ++  + G    R    +
Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPN 175


>gi|51595504|ref|YP_069695.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153948068|ref|YP_001401830.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pseudotuberculosis IP 31758]
 gi|170025177|ref|YP_001721682.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pseudotuberculosis YPIII]
 gi|186894557|ref|YP_001871669.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51588786|emb|CAH20400.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
           [Yersinia pseudotuberculosis IP 32953]
 gi|152959563|gb|ABS47024.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751711|gb|ACA69229.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
           YPIII]
 gi|186697583|gb|ACC88212.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 168

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +     +  GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRASAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|45656521|ref|YP_000607.1| flagellar motor protein MotB [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599756|gb|AAS69244.1| sodium translocating Bacterial Flagellar Motor protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 275

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 18/164 (10%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L+K           +     V       G++IS++       F+  S+I      + L
Sbjct: 87  KALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKIAL 143

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302
           +K   ++      + + GH DA+                +NW L+  RA ++   ++   
Sbjct: 144 RKASSLIKDLNRFVRVEGHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVE 203

Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342
            +       +S F   R        +    + NRRIDI++   +
Sbjct: 204 KLDPSWFQAVS-FGAFRPLVVEYAGTPEAKAYNRRIDIVIMTEK 246



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +   N+  + + Y D +T+L+ FF++++    T+    + I   F          
Sbjct: 3   KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
                        + ++    +  + ++K+
Sbjct: 63  QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92


>gi|296117356|ref|ZP_06835946.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295976122|gb|EFG82910.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 157

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+ + +    +    L +    LA   +  I I G+ D          N  L   R
Sbjct: 52  DRVFFELNQNSLSADAKATLDRQAAWLAKYPQVNIQIAGNCDDR---GTEEYNLALGQRR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
           A +A+  L+  GV+  RI+ IS +   R     D     S NR
Sbjct: 109 ANAAHDYLVAKGVAASRITTIS-YGKDRPTAPGDDEASWSQNR 150


>gi|258593789|emb|CBE70130.1| Outer membrane lipoprotein omp16 precursor
           (peptidoglycan-associated lipoprotein) (modular protein)
           [NC10 bacterium 'Dutch sediment']
          Length = 184

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S    +    L +  + L  +    I I GH D       A  N  L   R
Sbjct: 77  KDIFFDFDKSTIRDDAKSSLNEDLQWLNANPTAQIVIEGHCDER---GTAEYNLGLGERR 133

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341
           A +A   +M +G++  RI  +S F   R       +     NRR   +V++R
Sbjct: 134 AKAAKDYVMAAGINAKRIRTVS-FGKERPFATGHDESAWKWNRRAHFVVDER 184


>gi|329295949|ref|ZP_08253285.1| peptidoglycan-associated outer membrane lipoprotein [Plautia stali
           symbiont]
          Length = 172

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   F         E   +L +    L  +     +I GH D          N  L   
Sbjct: 67  NNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGER 123

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS  ++S +S +   +  +        + NRR  ++
Sbjct: 124 RANAVKMYLQGKGVSAHQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171


>gi|315023542|gb|EFT36546.1| OmpA [Riemerella anatipestifer RA-YM]
          Length = 488

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 212 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 271

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 272 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 315

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 316 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 375

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 376 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 432

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 433 -KGVGSAEATVPASASNEERMKDRKVVV 459


>gi|225350134|gb|ACN87977.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|156106757|gb|ABU49601.1| outer membrane protein [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|126046387|gb|ABN73088.1| OmpA [Riemerella anatipestifer]
 gi|126046398|gb|ABN73090.1| OmpA [Riemerella anatipestifer]
 gi|126046413|gb|ABN73093.1| OmpA [Riemerella anatipestifer]
 gi|225350132|gb|ACN87976.1| OmpA [Riemerella anatipestifer]
 gi|225350136|gb|ACN87978.1| OmpA [Riemerella anatipestifer]
 gi|225350138|gb|ACN87979.1| OmpA [Riemerella anatipestifer]
 gi|225350142|gb|ACN87981.1| OmpA [Riemerella anatipestifer]
 gi|225350144|gb|ACN87982.1| OmpA [Riemerella anatipestifer]
 gi|225350148|gb|ACN87984.1| OmpA [Riemerella anatipestifer]
 gi|225350150|gb|ACN87985.1| OmpA [Riemerella anatipestifer]
 gi|225350152|gb|ACN87986.1| OmpA [Riemerella anatipestifer]
 gi|225350156|gb|ACN87988.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|119382554|gb|ABL73889.1| outer membrane protein A [synthetic construct]
          Length = 395

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|106647238|gb|ABF82272.1| outer membrane protein A precursor [Riemerella anatipestifer]
 gi|318068275|gb|ADV36925.1| outer membrane protein A [Riemerella anatipestifer]
 gi|318068277|gb|ADV36926.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|126046419|gb|ABN73094.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    R  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VRGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|86739073|ref|YP_479473.1| OmpA/MotB [Frankia sp. CcI3]
 gi|86565935|gb|ABD09744.1| OmpA/MotB [Frankia sp. CcI3]
          Length = 187

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD +SS    E +  L +I   +      I++ G++D         DN RLS DRA + 
Sbjct: 90  LFDSNSSELRREAVTALGQILPSIREHPGHIAVIGYSDGL---GRTEDNLRLSQDRAKAV 146

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              L   G+    + ++ G             +++ RR++I++ 
Sbjct: 147 ESWLATQGIPGS-VLEVEGKGEEG--AQDGVADASRRRVEIVLR 187


>gi|15641023|ref|NP_230654.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227081182|ref|YP_002809733.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
 gi|229505393|ref|ZP_04394903.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
           330286]
 gi|229510937|ref|ZP_04400416.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
 gi|229518058|ref|ZP_04407502.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
 gi|229608412|ref|YP_002879060.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
           MJ-1236]
 gi|254848138|ref|ZP_05237488.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
 gi|255744790|ref|ZP_05418741.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
           101]
 gi|298498879|ref|ZP_07008686.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
 gi|9655471|gb|AAF94169.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227009070|gb|ACP05282.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
 gi|229344773|gb|EEO09747.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
 gi|229350902|gb|EEO15843.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
 gi|229357616|gb|EEO22533.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
           330286]
 gi|229371067|gb|ACQ61490.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
           MJ-1236]
 gi|254843843|gb|EET22257.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
 gi|255737821|gb|EET93215.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
           101]
 gi|297543212|gb|EFH79262.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
          Length = 294

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%)

Query: 51  MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++ I+        A+  +Y     ++    +     E                     K 
Sbjct: 9   LFAISTLSASVASALEVRYMATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           ++D ++         + +                + +  +  ++             +++
Sbjct: 69  NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E    P  S +   +  ++  +      +SS L     +     +      +   IS  
Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183

Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286
                  +D+  S      +   L +I E + ++ ++  +    +TD++   N +     
Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|260428791|ref|ZP_05782768.1| OmpA domain protein [Citreicella sp. SE45]
 gi|260419414|gb|EEX12667.1| OmpA domain protein [Citreicella sp. SE45]
          Length = 174

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +   F    S   P+    L    + L  +++ +++  GH D          N  L   R
Sbjct: 64  DRVFFAVDQSTLSPQAQATLDAQAQWLMTNSDYLAVIEGHADEQ---GTREYNIALGARR 120

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           A +  + L+  G++ +R+  IS +   R           S NRR
Sbjct: 121 ANATMEYLVSKGIASNRLRFIS-YGKERPVEVCAEEACYSKNRR 163


>gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
 gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
          Length = 205

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F  + +   PE    L ++   L+        + + G  D          N  LS
Sbjct: 77  KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337
             RA S    L+  G+  D+I+   G         +      P  +       +RR++I 
Sbjct: 134 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 192

Query: 338 VED 340
           V+ 
Sbjct: 193 VKG 195


>gi|162451716|ref|YP_001614084.1| hypothetical protein sce3444 [Sorangium cellulosum 'So ce 56']
 gi|161162298|emb|CAN93603.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 357

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 4/109 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F        P +  +L  + ++L    ++  +     +    N A     L+  RA +  
Sbjct: 135 FVAGKPEFEPASQGLLANVAQILKDHPQIQFVEVAAYSEKVGNDAATV-TLTKKRAEAVV 193

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQG 343
           + L   GV ++R+ + +G+  H      +   +   NRR++I +    G
Sbjct: 194 KALTALGVEKNRV-RAAGYGAHCATDPGETEEAKEKNRRVEIKIMRLDG 241


>gi|153840578|ref|ZP_01993245.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
 gi|149745760|gb|EDM56890.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
          Length = 245

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++          +     +  S  D   T + +++        +
Sbjct: 92  QDWQSRDQRIEVALSSVLFQ-SKYNAFSDCIANLLKYSFEDIAFTILHYERQGDQLTKAS 150

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+ E
Sbjct: 151 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQS---LSERRAESLRTYFESLGLPE 207

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 208 DRI-QVQGYGKRRPIADNGTPIGKDKNRRVVISLGRTQ 244


>gi|27375465|ref|NP_766994.1| hypothetical protein blr0354 [Bradyrhizobium japonicum USDA 110]
 gi|27348602|dbj|BAC45619.1| blr0354 [Bradyrhizobium japonicum USDA 110]
          Length = 250

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 70/253 (27%), Gaps = 20/253 (7%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
              P     + +   + +    +++        +       L                  
Sbjct: 7   PGGPIAGILEPRSSAAQEGLAMRSAAKGLTAILSIMAIGAALSLPASPAFAGDDGNSKNV 66

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +            K           +    P  S+ K++   R +  + L+      ++ 
Sbjct: 67  TEDEIVRALAPPQKKPLTRGLSIAPQADPAPSASETKLIQSVRGRSTRSLSSTEREEIAS 126

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           +  D     +          IS     +        ++  P+                  
Sbjct: 127 VAKDKPNIDLEITFDYNSANISTKSLASVQ--ALGRALTSPDLK-------------GST 171

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             + GHTDA         N  LS  RA +  + L++   +S   +  + G+   +LK  S
Sbjct: 172 FVVAGHTDA---AGGESYNQDLSERRADAIKRYLVEKYSISATDLVTV-GYGKSKLKDPS 227

Query: 325 DPMNSANRRIDIL 337
            PM   NRR+ ++
Sbjct: 228 QPMAEVNRRVQVV 240


>gi|322833830|ref|YP_004213857.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
 gi|321169031|gb|ADW74730.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
          Length = 170

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + N   F         E   +L      L  +     ++ GH D    
Sbjct: 52  EEQARLQMQELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTVEGHADER-- 109

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 110 -GTPEYNIALGERRATAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 167

Query: 336 IL 337
           ++
Sbjct: 168 LV 169


>gi|294012218|ref|YP_003545678.1| OmpA-family protein [Sphingobium japonicum UT26S]
 gi|292675548|dbj|BAI97066.1| OmpA-family protein [Sphingobium japonicum UT26S]
          Length = 236

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD +   PLPE    +  + +  A        + G+TD        R N  LSL RA +
Sbjct: 132 FFDWNMDTPLPEGAGTISTLTQTAAQCGWTRFGVTGYTDT---SGSNRYNDGLSLRRARN 188

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              ++ + GVS D I  ++G    +LKI +        NRR++I 
Sbjct: 189 VASLMSQGGVSADAI-TVTGLGETQLKIETADGVREPMNRRVEIT 232


>gi|291616741|ref|YP_003519483.1| Pal [Pantoea ananatis LMG 20103]
 gi|291151771|gb|ADD76355.1| Pal [Pantoea ananatis LMG 20103]
          Length = 192

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   F         +   +L +    L  +     +I GH D          N  L   
Sbjct: 87  NNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER---GTPEYNIALGER 143

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D++S +S +   +  +        + NRR  ++
Sbjct: 144 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 191


>gi|289625247|ref|ZP_06458201.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330870468|gb|EGH05177.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 647

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              +E        + +T S  +       +R++     ++  + +   ++ +   + +  
Sbjct: 356 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 415

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L               +                 +
Sbjct: 416 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVPHDTGMSAQAAGEVDDYQ 475

Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      Q     +   L+   +  +    +    +++   I  I   +  +F   
Sbjct: 476 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 535

Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            +            L  I   L ++     I I GH D       A+ N ++S  RA + 
Sbjct: 536 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 592

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  G+  + +  + G   ++  +  D              NRR++I V  
Sbjct: 593 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 645


>gi|229523853|ref|ZP_04413258.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae bv. albensis VL426]
 gi|229337434|gb|EEO02451.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
           cholerae bv. albensis VL426]
          Length = 172

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   ++    +   +L      L  +    ++I GH D          N  L  
Sbjct: 66  ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEHNIALGE 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + L   GV   ++S +S +   +  +        + NRR  ++
Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171


>gi|224534380|ref|ZP_03674958.1| outer membrane protein [Borrelia spielmanii A14S]
 gi|224514482|gb|EEF84798.1| outer membrane protein [Borrelia spielmanii A14S]
          Length = 381

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K +  E    GI +S+  +     F  +S   L +    L  I
Sbjct: 242 DNFIETEVENYIQEKKIKAISVEKNNKGINLSLDIE-----FYPNSFQILQKEYKKLDLI 296

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L       I I GHT+      +  + + LS  RA +    L+K  V         G
Sbjct: 297 AKLLEKFKKNNILIEGHTEQF---GLEEEMYELSEKRARAIGNYLIKMKVKNKDQILFKG 353

Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340
           +   + K   S P+ + NRR++I + +
Sbjct: 354 WGSQKPKYPKSSPLKAKNRRVEITILN 380


>gi|298369983|ref|ZP_06981299.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281443|gb|EFI22932.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 227

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F     I  PE    L  + + L   + E + + GHTD   F    + N  LS  RA  
Sbjct: 68  LFGFDKDILRPEAKESLNALAQRLSNSNVESVRVEGHTD---FMGSEQYNQALSERRANV 124

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+  GV+ ++IS + G    +
Sbjct: 125 VANYLVNQGVASNKISAV-GLGESQ 148


>gi|114327771|ref|YP_744928.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315945|gb|ABI62005.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 196

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   +  + S    +    L +    L    +V   + G+ D          N  L   R
Sbjct: 91  DRVFYAFNQSSLSTDAQGTLDRQSAWLQKYPQVSVQVAGNCDDR---GTEEYNLALGQRR 147

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANR 332
           A +A   L+  GV+  RI+ IS +   R       +   + NR
Sbjct: 148 ANAARDFLVAKGVASSRITTIS-YGKDRPTAVGDDEQAWAQNR 189


>gi|323496601|ref|ZP_08101654.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
 gi|323318347|gb|EGA71305.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
          Length = 175

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 75  FAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER---GTPEYNIALGERRATAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            + L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQDEDVYAKNRRAVLV 174


>gi|258622021|ref|ZP_05717050.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
 gi|258627110|ref|ZP_05721906.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
 gi|262165241|ref|ZP_06032978.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
 gi|258580628|gb|EEW05581.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
 gi|258585774|gb|EEW10494.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
 gi|262024957|gb|EEY43625.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
          Length = 294

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     +      +   IS             S    
Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196

Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   L +I E + +++++  +    +TD++   N +     LS  RA    +     G
Sbjct: 197 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           + EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
 gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
          Length = 372

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L      +         I + G+ D          N +LS 
Sbjct: 249 SDVLFAFGKSSLKPAAAQALDAANNEINALGLANPAIQVNGYADRI---GKQAANLKLSQ 305

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    L+  G +   ++ + G+        +               + +RR+++ V
Sbjct: 306 RRAETVANYLVSKGQNAANVTAV-GYGSANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 364

Query: 339 EDRQ 342
           +  +
Sbjct: 365 QGSK 368


>gi|225350154|gb|ACN87987.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+      +   +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENDGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|207725016|ref|YP_002255413.1| chemotaxis (motility protein b) transmembrane (partial sequence)
          [Ralstonia solanacearum MolK2]
 gi|206590245|emb|CAQ37206.1| probable chemotaxis (motility protein b) transmembrane (partial
          sequence) [Ralstonia solanacearum MolK2]
          Length = 81

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 9  QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
          + +    I+ ++       ++ G+WKI YADF+T +MAFFL+MW++++      
Sbjct: 3  KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAEL 56


>gi|163737130|ref|ZP_02144548.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
 gi|161389734|gb|EDQ14085.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
          Length = 326

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  +     +    L  + E L  + +   +  GHTD          N  +S  RA + 
Sbjct: 222 FETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTV---GSLEQNIAISERRADAV 278

Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++L  S V   R+  ++G         +        NRR+++++  R
Sbjct: 279 RRRLLADSAVDRARV-AVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326


>gi|77361038|ref|YP_340613.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76875949|emb|CAI87171.1| putative Component of sodium-driven polar flagellar motor
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 292

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q+ A KI+  +SG+           +     +  S  D   T M +  +SS     +
Sbjct: 141 QDWQNSADKIAVGMSGVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199

Query: 249 IVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L KI E L +    E I+I  +TD+        +N  LS  RA +    ++  GV E
Sbjct: 200 QQRLDKIAEYLKNDPSIESINIASYTDSY---GGRWNNLDLSKTRAKAIKDYMISLGVDE 256

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            ++    G    R    +D     + NRR+ I +
Sbjct: 257 TKVHT-DGLGEKRFVDTNDTILGRNKNRRLVIQI 289


>gi|163794140|ref|ZP_02188113.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
 gi|159180754|gb|EDP65273.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
          Length = 250

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 12/142 (8%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + L  D +++          ++I++       +F+   +         + ++   L    
Sbjct: 108 AKLSGDPVLRTARIVRAGDRLIITLPSDL---LFEAGQARLSTTARSAVAELATALVTLP 164

Query: 264 EVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL- 320
             I + GH D  P         N  LSL RA +    L+ +G+   R+  + G    R  
Sbjct: 165 NRIDVVGHADPRPIPPGAPFGTNRALSLARADAVAVALVDAGL--SRMPTVEGMGDSRFY 222

Query: 321 -KIASDPMN---SANRRIDILV 338
               + PM    +  RR+D+++
Sbjct: 223 TIAPTAPMERRYALARRVDVVL 244



 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 19/50 (38%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
                     SW +   D +++++AFF++ + + + +           +
Sbjct: 19 RRAGRKYGGGPSWLVTLVDLVSLMLAFFVMRFAMTSIESPRFDEAAASIS 68


>gi|50235095|gb|AAT70750.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGAFQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|32472143|ref|NP_865137.1| outer membrane protein A (OmpA) [Rhodopirellula baltica SH 1]
 gi|32397515|emb|CAD72821.1| probable outer membrane protein A (OmpA) [Rhodopirellula baltica SH
           1]
          Length = 259

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 14/259 (5%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            QNP        +          N +  ++   N++ Q     N       +Q  +  + 
Sbjct: 4   SQNPYLAGGGTSVWQPPPSTTAVNGIQAQVAELNRRVQLLDDNNRQLTTQLAQSEQQSQV 63

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                +   K L  +T   +S               +  A  R          ++     
Sbjct: 64  YRDELNLVRKQLSDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGR 123

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263
           L    +      E     + + +   +   +F + +    P    +L      L      
Sbjct: 124 LNLGGLK----VEQDGEVLRVVLPSDQ---LFAQGTGQLQPSAGAILDPTAAQLRSVFPR 176

Query: 264 EVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
           + I I G+TD +P +   A    +L+  +  +    L +  G+ E ++  ++    +  +
Sbjct: 177 QRIGIEGYTDNAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVA-QGSNNPR 235

Query: 322 IASDPMNSA--NRRIDILV 338
             +        NRRI++++
Sbjct: 236 KDNTTPAGRVANRRIELVI 254


>gi|220904130|ref|YP_002479442.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868429|gb|ACL48764.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 155

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                F         +   +L++ G++L     +   I G+ D          N  L   
Sbjct: 47  DGRVYFAFDKFNVENQYKEMLKQKGDLLKQYPAIRVRIEGNCDDR---GTQEYNLALGER 103

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           RA +AY+ L+  GV+ +++  IS +      +   ++   + NRR
Sbjct: 104 RARAAYEYLVMMGVNPNQLEMIS-YGKENPAVQGNNEAAWAKNRR 147


>gi|45656096|ref|YP_000182.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|30984127|dbj|BAC76763.1| OmpA family outer membrane lipoprotein [Leptospira interrogans
           serovar manilae]
 gi|45599329|gb|AAS68819.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 195

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 19/174 (10%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                  +        +++     + +       +AD++ + +              D  
Sbjct: 22  SSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYP--------DGL 73

Query: 233 NTPMFDKSSSIPLP-ETIVVLQKIGEVLAHSTEVI------SIRGHTDA---SPFRNIAR 282
             P F    +   P +     +    V+      +       I GHTDA          +
Sbjct: 74  TRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAIGPEQAEGAKK 133

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            N   S  RA +  Q L+K G+  +RI    G          D  ++ NRR+  
Sbjct: 134 GNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLDAKDAKNRRVTF 186


>gi|85713237|ref|ZP_01044263.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
           OS145]
 gi|85692932|gb|EAQ30904.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
           OS145]
          Length = 303

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            S      +   L++I + L    ++  +    +TDA         N  L+  RA +   
Sbjct: 197 DSDELTAPSQRKLKQISDYLKVDADLKLVLIDSYTDAL---GAREPNQTLTEQRANAIKS 253

Query: 298 VLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRI 334
             ++ G+  DRI  ++     R      ++     NRR+
Sbjct: 254 FFVERGIKADRIQTVA-HGEDRPIDHNDNEIGRQKNRRV 291


>gi|262402652|ref|ZP_06079213.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
 gi|262351434|gb|EEZ00567.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
          Length = 294

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     +      +   IS             S    
Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196

Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   L +I E + +++++  +    +TD++   N +     LS  RA    +     G
Sbjct: 197 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           + EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|167644831|ref|YP_001682494.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167347261|gb|ABZ69996.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 409

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     F     +  PE   V+ +  +     +   I + GHTD        + N +LS 
Sbjct: 301 REFVVYFPFDQYVLTPEAQAVVSQAADYAKGGNATKIVVVGHTDT---SGSPKYNAKLSE 357

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            RA +    L+ +GV+   +  +         +A+        NRR  I +
Sbjct: 358 RRAKAVADGLVGAGVAATTL-AVDWKGESEPAVATGDGVKEPLNRRSTISI 407


>gi|326315314|ref|YP_004232986.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372150|gb|ADX44419.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 379

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +  LP++   ++++ ++L       +++ G+TD +     A  N  LS  RA + 
Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDASLKLAVNGYTDNT---GDAAHNKTLSEGRAKAV 333

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              +   G+   R+S   GF        +      + NRR++++
Sbjct: 334 AAAVAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376


>gi|30314442|gb|AAP15430.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
          Length = 149

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146


>gi|326794029|ref|YP_004311849.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326544793|gb|ADZ90013.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 272

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 88/229 (38%), Gaps = 9/229 (3%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
           + + K         + +  +++ S+  + +  R ++      +     +     +   + 
Sbjct: 24  NPSAKPSDANYPMPLHFTEHARLSDALRIATVRVNQLEHSGGEECMPGRIYRMHKLLEMA 83

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI--LISIIDQRNT 234
               +  L       L+ L ++I +   GLV  +     L E     +  ++ ++++ + 
Sbjct: 84  NGEHQTGLHEDAALNLRALDQQIENAEKGLVFLHARTTCLGEAHDDVLADILPLLERISR 143

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F  +S+        +L ++ + L  +    +++ GHTD+        +N  L+LDRA 
Sbjct: 144 TNFASASAAMPDAMPPLLDELAKWLILNPHYKVTLVGHTDSQ---GSIEENEHLALDRAA 200

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  + L+   V   ++ + +G         +    S   NRR+++ V  
Sbjct: 201 TISRYLIAHNVDAHQL-RCNGEGPWNPISHNASEQSRKYNRRVEVDVSR 248


>gi|318068279|gb|ADV36927.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVSDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAEDNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|153875989|ref|ZP_02003535.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152067548|gb|EDN66466.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 58

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            RA +    L+  G++ +R+    GF   +    +        NRR++I++ +
Sbjct: 2   RRAKTVRNYLINRGINSERLIA-KGFGEKQPIATNATNAGRQQNRRVEIIILN 53


>gi|325915597|ref|ZP_08177905.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538157|gb|EGD09845.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 439

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 13/116 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S   P+ + VL  +   L   T + + +RGHTDA   +     N  LS  
Sbjct: 328 NDRILFDFDKSDIRPDAVRVLDTLAAALGKVTTQQMEVRGHTDA---KGDDAYNQALSER 384

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339
           RA++    L   G ++   +K  G    +    +      +P     NRR++I + 
Sbjct: 385 RAHAVLAALRTRGAAQGAGAKGYG--ESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 438


>gi|167374419|gb|ABZ79139.1| outer membrane protein [Riemerella anatipestifer]
          Length = 338

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 88  LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 147

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 148 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 191

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 192 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 251

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 308

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335


>gi|167374413|gb|ABZ79136.1| outer membrane protein [Riemerella anatipestifer]
          Length = 338

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 88  LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 147

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 148 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 191

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 192 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 251

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 308

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335


>gi|50235099|gb|AAT70752.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|50235107|gb|AAT70756.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|322379220|ref|ZP_08053611.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
 gi|321148360|gb|EFX42869.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
          Length = 181

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            I          F         +   ++ +  + +  S   + + G+TD          N
Sbjct: 67  QIESGTVVGQVYFSFDKYDIRADMESIIDQAAQKIKESQMKVLLEGNTDEF---GSGEYN 123

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340
           + L+  RA S  Q L+  G+++D I ++      +   +  +      NRR+DI V +
Sbjct: 124 FALANKRALSVKQALIIKGIAQDTI-RVVSLGETKPSCQEKNKTCYRKNRRVDIKVVE 180


>gi|311280760|ref|YP_003942991.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
 gi|308749955|gb|ADO49707.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
          Length = 265

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 15/117 (12%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291
            +F   S+         L+++   +       + + I GH D     N  ++N  LSL R
Sbjct: 153 SLFGFGSATLSRTGETELRRMIAQIQEQHIPVKRVLITGHAD--RIGNSEKNN-ALSLAR 209

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNS------ANRRIDILVED 340
           A +   +L+  G+ E  + +  G    +  +    +   +       NRRI I + +
Sbjct: 210 AEAVKTLLVAQGIPEA-LVETRGVGASQPLVVCPGETTPAVVACLEKNRRITINILE 265


>gi|251792474|ref|YP_003007200.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
 gi|247533867|gb|ACS97113.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
          Length = 278

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD        +   V+ K+   L  S  + + + G+TD          N  LS  RA
Sbjct: 142 DFLFDFDKDTLTEKGKEVVDKVAAQLKESKAQEVKVAGYTDRL---GSESYNMDLSQRRA 198

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA------NRRIDI 336
                 L + GV   +IS + G          +++  N        NRR++I
Sbjct: 199 NRVKARLTEQGVDA-QISAV-GHGEAHQVKACSNEKGNKLISCLRPNRRVEI 248


>gi|319776072|ref|YP_004138560.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
 gi|319896881|ref|YP_004135076.1| outer membrane protein, ompa/motb [Haemophilus influenzae F3031]
 gi|329123235|ref|ZP_08251803.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
 gi|317432385|emb|CBY80740.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3031]
 gi|317450663|emb|CBY86883.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
 gi|327471444|gb|EGF16892.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
          Length = 284

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 17/116 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   ++ K+   L  +  + I I G+TD          N  LS  R
Sbjct: 148 GDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRL---GTDSYNLELSQRR 204

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA--------NRRIDIL 337
           A S    L+K GV+  +I+ I G+     +I   +D             NRR++I+
Sbjct: 205 ANSVKNHLVKDGVTA-QITAI-GYGK-NPQIKSCNDVPQGKALKDCLHPNRRVEII 257


>gi|270723293|ref|ZP_06223417.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270315265|gb|EFA27588.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 149

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 17/116 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   ++ K+   L  +  + I I G+TD          N  LS  R
Sbjct: 33  GDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRL---GTDSYNLELSQRR 89

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA--------NRRIDIL 337
           A S    L+K GV+  +I+ I G+     +I   +D             NRR++I+
Sbjct: 90  ANSVKNHLVKDGVTA-QITAI-GYGK-NPQIKSCNDVPQGKALKDCLHPNRRVEII 142


>gi|262171987|ref|ZP_06039665.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
           MB-451]
 gi|261893063|gb|EEY39049.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
           MB-451]
          Length = 286

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R Q +   +S+ L     +     +      +   IS             S    
Sbjct: 132 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 188

Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   L +I E + +++++  +    +TD++   N +     LS  RA    +     G
Sbjct: 189 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 245

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           + EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 246 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 285


>gi|259090555|gb|ACV91900.1| OprL [Pseudomonas fluorescens]
 gi|259090583|gb|ACV91914.1| OprL [Pseudomonas fluorescens]
 gi|309244355|gb|ADO52182.1| OprL [Pseudomonas poae]
 gi|309244357|gb|ADO52183.1| OprL [Pseudomonas poae]
 gi|309244359|gb|ADO52184.1| OprL [Pseudomonas trivialis]
 gi|309244361|gb|ADO52185.1| OprL [Pseudomonas trivialis]
 gi|309244363|gb|ADO52186.1| OprL [Pseudomonas trivialis]
 gi|309244365|gb|ADO52187.1| OprL [Pseudomonas trivialis]
 gi|309244367|gb|ADO52188.1| OprL [Pseudomonas trivialis]
 gi|309244369|gb|ADO52189.1| OprL [Pseudomonas trivialis]
 gi|309244371|gb|ADO52190.1| OprL [Pseudomonas sp. 'ribotype C P501-02']
 gi|309244373|gb|ADO52191.1| OprL [Pseudomonas sp. 'ribotype C P515-18']
 gi|309244375|gb|ADO52192.1| OprL [Pseudomonas sp. 'ribotype C P527-22']
          Length = 157

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 67  FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA 323
           + L+  GV+  ++  +S +   R    
Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVAT 149


>gi|251733503|emb|CAR82501.1| pal [Ensifer adhaerens]
          Length = 87

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      +++ GH D          N  L   RA S   
Sbjct: 1   TDSTSIRADAQQTLDRQAQWLAKYPNYAVTVEGHADER---GTREYNLALGARRAASTKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLISRGVPANRLKTIS-YGKEKPVA 81


>gi|193227219|gb|ACF16394.1| outer membrane protein P6 [Pasteurella pneumotropica]
          Length = 156

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 47  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPASKVIVEGNTDER---GTPEYNIA 103

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333
           L   RA +    L   GV   ++S +S +   +  +      +   NRR
Sbjct: 104 LGQRRADAVKSFLAGKGVEGSKVSTVS-YGEEKPAVLGHDEAAYSKNRR 151


>gi|312885105|ref|ZP_07744791.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367234|gb|EFP94800.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 1569

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 84/297 (28%), Gaps = 25/297 (8%)

Query: 54  INATD-DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           + + D  +    I    N     L     G    Q        +             S+ 
Sbjct: 445 LASIDFIEKANKISNVLNTAESALNRPIFGPVSPQTRALIDLPDIFPNLDTLRFRNTSLR 504

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
             I    +   +   +      +    S+H  +    + +  + L K T    + +    
Sbjct: 505 PFIEKVGKAGGFLLDKPLTAVTAFYTLSQHSGSKANSEKKNNEFLDKITAYSLATS---- 560

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L   S +     K+K   Q +   +   L+ L   + V  V        + +      
Sbjct: 561 -SLQRTSLQAAQDDKKKSEYQAVVTSLREELNKLSYQDGVSIVEGTVGDLKVRL----DA 615

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSL 289
               F+      L E     Q IG  LA        I I GHT           N  LS+
Sbjct: 616 THFAFNSDKIQVLEEKGNPYQTIGANLAKIAHSPFQIVIAGHTCDI---GSEEVNLNLSM 672

Query: 290 DRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLK----IASDPMNSANRRIDIL 337
            RA +    ++ +   E R     +         +        ++   + NRR++IL
Sbjct: 673 KRAIAVKNAILNAISGEGRQAWEGMFVTEAHGFSKPLPGNENRNEHERAKNRRVEIL 729


>gi|194435106|ref|ZP_03067342.1| OmpA family protein [Shigella dysenteriae 1012]
 gi|194416637|gb|EDX32770.1| OmpA family protein [Shigella dysenteriae 1012]
 gi|332089196|gb|EGI94303.1| ompA family protein [Shigella dysenteriae 155-74]
          Length = 127

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTVQGRAENRRVAVVITTP 127


>gi|89076780|ref|ZP_01163047.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
 gi|89047578|gb|EAR53193.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
          Length = 139

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 7/126 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           V          +++     T  +   S     E    LQ + + L         + G+T 
Sbjct: 1   VDTAPPVQAATVTVEPSTVTIAYSVDSKHLTEEDKHRLQPMIQRLTRYPSATAEVTGYTS 60

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
            +        N +LS  RA +  ++L +     ++I+   G         +D     + N
Sbjct: 61  NT---GSEAYNLKLSEKRAKNVAELLSQYVADANQITS-KGIGEANSIATNDTAKGRAEN 116

Query: 332 RRIDIL 337
           RR++I 
Sbjct: 117 RRVEIY 122


>gi|330810626|ref|YP_004355088.1| hypothetical protein PSEBR_a3732 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378734|gb|AEA70084.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 449

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 16/287 (5%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
                + +   G           DEQ+    + +  +     + +   +   +       
Sbjct: 168 FSGEAKTWEAVGGAGGPIHLYARDEQSGTYDTFKELVLSRQGKRLDPTARRFESSEQLSD 227

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD-----LCKSTDLEKSINKEENYFLP 176
              Q  +   F      +       +  DS+           +   L + +         
Sbjct: 228 AVSQDPQGIGFIGLPYVRQAKALAIVDGDSQPMLPLNNLIATEDYPLSRRLFFYLPPQAT 287

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               E ++A  + ++ Q +          + A  +    L       +            
Sbjct: 288 NPWAEALVAFTQSEQGQTIVAANGFIAQTVQAMAVTPNALMPEGYQALSRHAQRLTVNFR 347

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F++ S+    +    L ++ + +    +      + G  DA      A     LS  RA 
Sbjct: 348 FEEGSASLDNKAHQDLGRVFDYIKQHGKTDRSVTLVGFGDAKDDPARADL---LSKLRAM 404

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +  + L+K GV+   + ++ GF       A+  D     NRR+++ V
Sbjct: 405 AVRRELVKYGVA---LREVRGFGALMPVAANSEDAGRVRNRRVEVWV 448


>gi|295096555|emb|CBK85645.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 173

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|149178718|ref|ZP_01857301.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
 gi|148842416|gb|EDL56796.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
          Length = 242

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLD 290
               F + S+   PE    L  I E+L  +   + +RGH    P    +   D+  LS  
Sbjct: 121 GAACFGRFSAELTPEIKQKLDIIAEILLPTPNRLIVRGHASPEPLPKDSKFLDSQELSFY 180

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNS-ANRRIDILV 338
           RA +  + L   G+  +R+  +S       + I  +P     NRR+D+ +
Sbjct: 181 RAKNVAEYLESKGIEPERLI-VSSVGDAEPRTITRNPEEQYLNRRVDVFL 229



 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 2/119 (1%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT--DDDTKKAIEQYFNPFGKNLMTAS 80
            +D P  +  W + Y D M++L+ FF+++  ++    D+ + +A+              +
Sbjct: 5   EEDAPPGVPEWVVTYGDMMSLLLTFFIMLVSMSEIRNDEGSVRAMLDSLRERFGTHQGTA 64

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  +P    S+     S  +  TK   +   G     K  +R+            
Sbjct: 65  AVPGKSLDPTSNQSKPASKGSSSDGGTKTGKEKSSGGGGPNKTVERINTGTEVTLGGAA 123


>gi|71281747|ref|YP_267714.1| ompA family protein [Colwellia psychrerythraea 34H]
 gi|71147487|gb|AAZ27960.1| ompA family protein [Colwellia psychrerythraea 34H]
          Length = 562

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 9/106 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  ++     +    L ++ + +        +  G +D+         N  LS  RA S 
Sbjct: 463 FAYATKELDNKGKRDLLRLVDFMEDHQSSRIVLMGFSDSV---GAQVKNTHLSYQRAKSV 519

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339
              L   G+    +  +           ++  +    NRR+++ + 
Sbjct: 520 ELALTSRGIP---VLAVEAMGEALPIANNNTEDGRKRNRRVEVWLL 562


>gi|329113829|ref|ZP_08242600.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
 gi|326696839|gb|EGE48509.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
          Length = 160

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D + S    +    LQK  + LA   +  + + G+ D          N  L   R
Sbjct: 55  DRVFYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR---GTEEYNIALGQRR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
           A +A   L+  GV+  RIS IS +   R       +   + NR
Sbjct: 112 ANAARDYLVAKGVASSRISTIS-YGKDRPTALGDDEDAWAQNR 153


>gi|256820385|ref|YP_003141664.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581968|gb|ACU93103.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 397

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 11/227 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           +K  +     S N ++ +Q     +    N    +H K++    + K  +L +      +
Sbjct: 168 SKQQLTYDTKSANGQQGFQGNHFTLTAGLNIALGKHGKHADWAAASKKDELEEVAQRVAN 227

Query: 167 INKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +          ++  + K+          ++   ++              V  +     +
Sbjct: 228 LENNVADLKSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADL 287

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I        FD +SS P   +   +  + + +  +    I+I G+ D        + 
Sbjct: 288 ---IRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADEL---GGTQY 341

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           N  LS  RA +   +L+K+G+   RI+   G         +    + 
Sbjct: 342 NQTLSQKRADAVKDLLVKAGIDGSRITA-EGKGVDASVDKNSS-RAR 386


>gi|225350146|gb|ACN87983.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 77/268 (28%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+       EN   P    +    + +  + 
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDARVDV---AGPAENNGCPWPDTDNDGVLDKDDKC 227

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            ++               + +       +    +          F+ + +   PE+   L
Sbjct: 228 SNVP-------------GLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|219681692|ref|YP_002468078.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682247|ref|YP_002468631.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471385|ref|ZP_05635384.1| outer membrane protein A precursor [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219621980|gb|ACL30136.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624535|gb|ACL30690.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086068|gb|ADP66150.1| outer membrane protein A precursor [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086640|gb|ADP66721.1| outer membrane protein A precursor [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087225|gb|ADP67305.1| outer membrane protein A precursor [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087744|gb|ADP67823.1| outer membrane protein A precursor [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 349

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 20/120 (16%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+   P +   L K+ + +           + GH D          N +LS DRAY
Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYNQKLSEDRAY 289

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341
           S    L   G S D+I  + G         +                + +RR++I V   
Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347


>gi|90408384|ref|ZP_01216546.1| OmpA family protein [Psychromonas sp. CNPT3]
 gi|90310477|gb|EAS38600.1| OmpA family protein [Psychromonas sp. CNPT3]
          Length = 201

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S+   +    P   K  +   +    +        S L   + +N          R  ++
Sbjct: 17  SLQAIDMAKEPTEQKFDLSDEEADGVILARDNCPGSVLGADINNNGCGLTTAVKVRAQLM 76

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284
           I+         F+  S +     +  ++ + + +    +   +I GHT        A  N
Sbjct: 77  IN---------FETDSYVVSSNYLPKIEHLSQFMHEYPQTTVTIEGHTSHR---GTASYN 124

Query: 285 WRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI--DI 336
             LS  RA    ++L+ +  V   RI+ I G+   +L +  D    ++ NRRI  +I
Sbjct: 125 KILSQQRADMIKKILIEEYQVEASRITAI-GYGFDQLLLEGDDEYVHARNRRIVAEI 180


>gi|15616938|ref|NP_240151.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11386970|sp|P57414|OMPA_BUCAI RecName: Full=OmpA-like protein; Flags: Precursor
 gi|10039003|dbj|BAB13037.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 349

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 20/120 (16%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+   P +   L K+ + +           + GH D          N +LS DRAY
Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYNQKLSEDRAY 289

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341
           S    L   G S D+I  + G         +                + +RR++I V   
Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347


>gi|325474507|gb|EGC77694.1| OmpA family protein [Treponema denticola F0402]
          Length = 1345

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 91/311 (29%), Gaps = 25/311 (8%)

Query: 52   WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----------QNKIDL 100
            W I  +D ++ K   ++ +     L+          N                 +  I  
Sbjct: 1033 WNIQISDVESGKVFAEWTSKKDGKLLKKLVWDGKSGNSKAPDGRYMATMYIEYKKGDIVT 1092

Query: 101  SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR-DSEKGKDLCK 159
            +  E    ++   KIG + + K +    +              K  +     E  +    
Sbjct: 1093 AFTEDFILSTQAPKIGVSTRPKYFSPDNDGTDDDLYISLKADSKAGIENWKFEITEPEEN 1152

Query: 160  STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
               L      +E      +   + L+ +  +   D     + T    +       +  + 
Sbjct: 1153 GGKLFWKTGGKEKITNELIWDGRSLSGETVQSATDYPFTFTVTDKVGLTSVYRGYIPVDI 1212

Query: 220  TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGH 271
                    +     + +F  +++        ++ K   +L              + + GH
Sbjct: 1213 LVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGH 1272

Query: 272  TDASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PM 327
             + +             LS  RA +  Q L+K GV   R+S I G    +   + +D   
Sbjct: 1273 ANTTTGTEKEETTALLPLSKQRAEAVRQFLIKEGVRSSRLSSI-GMGSSKPVASLNDRDN 1331

Query: 328  NSANRRIDILV 338
               NRR++ ++
Sbjct: 1332 WWKNRRVEFIL 1342


>gi|197123809|ref|YP_002135760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196173658|gb|ACG74631.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 242

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S   PE+   LQK+ + L  +      ++G+ D       A+ N  L   RA SA
Sbjct: 141 FAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAESA 197

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            + L   GVS   +  +S +   +   +       S NRR D  +E 
Sbjct: 198 KKYLTDLGVSTS-VDTVS-YGEEKPVCSEATEACWSKNRRDDFQIER 242


>gi|91224536|ref|ZP_01259798.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
 gi|269968325|ref|ZP_06182346.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
 gi|91190878|gb|EAS77145.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
 gi|269827061|gb|EEZ81374.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
          Length = 204

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 6/131 (4%)

Query: 216 LFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
             +    G  I   D      +F   S    P     ++++ + L       SI  H  A
Sbjct: 62  EVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYP-TTSIELHGYA 120

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANR 332
           S      + N  LS  RA +  + L+   +   R+ +I GF    L      +  ++ NR
Sbjct: 121 SKVGGS-KHNQDLSERRARNVREALLSYDIEPSRV-RIVGFGDTHLAQQGTDEVSHALNR 178

Query: 333 RIDILVEDRQG 343
           R+   V   +G
Sbjct: 179 RVTASVVGYKG 189


>gi|30314426|gb|AAP15422.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
 gi|30314428|gb|AAP15423.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
 gi|30314452|gb|AAP15435.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
          Length = 149

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + +   +   + NRR D++
Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 146


>gi|282879247|ref|ZP_06287997.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281298640|gb|EFA91059.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 703

 Score = 73.1 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I++    +   +D   +   PE+   L ++ ++L  +    I +  H D   ++     N
Sbjct: 527 ITVPVLIDNIFYDFDKATLRPESKQALDELVKLLNENGNVTIELSAHCD---YKGSKEYN 583

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            +L+  RA S  Q L+  G+++DR+S + G+   + K+
Sbjct: 584 KQLAQRRAESVVQYLIAGGIAKDRLSPV-GYGKEKPKV 620


>gi|319942535|ref|ZP_08016845.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
 gi|319803938|gb|EFW00856.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
          Length = 222

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 22/120 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYS 294
           +F+   +    E   VL  +   +A     + +  G+ D          N +LS  RA +
Sbjct: 101 LFNFDKATLKDEGRAVLDDLVSRVAGVDLEVILTTGYADRI---GSDAYNLKLSQRRADA 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------------NRR--IDIL 337
               L++ GV    I    G       +   +                   NRR  ++++
Sbjct: 158 VKAYLVQKGVDAALIKS-EGKGEADPVVNCPNPSKAGQVKTFKELVQCLQPNRRAVVEVV 216


>gi|296274015|ref|YP_003656646.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296098189|gb|ADG94139.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 256

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 14/183 (7%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
             T      ++  N      +     A        ++++        +   +    +   
Sbjct: 60  DQTQDTIKRDESTNTSKDASNDADSNAQDTAAAADEMSQIAQEVNEQVSTQSEQVQITEG 119

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275
                +     D  ++ MF++             + KI  V+    +   I   G+TD S
Sbjct: 120 NNEFTL-----DIPSSIMFNEGEYNLSNKSAKNFISKIARVIRTMPQTFDIEIIGYTDRS 174

Query: 276 PFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            F++    RD W LS  RA S  + L+K+ +   ++  +S ++ +R K  +      NRR
Sbjct: 175 NFKSDTIPRDGWDLSALRAISVVKELIKNRIDPAQLK-VSAYSSYRPKSEN---AVENRR 230

Query: 334 IDI 336
           ++I
Sbjct: 231 VEI 233


>gi|322379707|ref|ZP_08054020.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
           HS5]
 gi|321147856|gb|EFX42443.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
           HS5]
          Length = 181

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            I          F         +   V+ +  + +  S   + + G+TD          N
Sbjct: 67  QIESGTVVGQVYFSFDKYDIRADMESVIDQAAQKIKESQMKVLLEGNTDEF---GSGEYN 123

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340
           + L+  RA S  Q L+  G+++D I ++      +   +  +      NRR+DI V +
Sbjct: 124 FALANKRALSVKQALIIKGIAQDTI-RVVSLGETKPSCQEKNKTCYRKNRRVDIKVVE 180


>gi|238897463|ref|YP_002923140.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|188474314|gb|ACD49741.1| outer membrane protein A [Candidatus Hamiltonella defensa]
 gi|229465218|gb|ACQ66992.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 365

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 17/153 (11%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---A 260
                + + + V              + ++  +F  +      E    L K+   L    
Sbjct: 203 QEKPPEILPEPVTKIDLEPVAQTQHFELKSDVLFGFNQWTLKKEGGEELNKLYSKLANVN 262

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                +++ G +D        + N  LS  RA S    L+  G+S D    I G      
Sbjct: 263 PQEGSVTVLGFSDRI---GGDKYNQLLSQKRAQSVADYLISKGISSDTPFVIKGLGKSNP 319

Query: 321 KIASDPMNSA------N-----RRIDILVEDRQ 342
              S            N     RR+D+ V   +
Sbjct: 320 VTGSKCNEVKKRLELVNCLAPDRRVDVKVTGNK 352


>gi|153951751|ref|YP_001398162.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939197|gb|ABS43938.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 317

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 52/321 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 12  W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151
                     +  + ++  +L+       K    L N    L+  + Q    + ++    
Sbjct: 45  KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANIINYK 104

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208
           +  KDL  + D +          L    +E     +  ++ ++  +    I   LS  + 
Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258
             +   +  +     I +S        +FDK S +        L+K              
Sbjct: 165 SKLDNNITIDEKTGSISLS-----AEVLFDKDSYVLKNGVKASLRKILSEYFDAILEDPK 219

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316
           +  + E I I GHTD+         N  LS  RAY     +     S+   ++   SG +
Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKFQKLLMASGRS 276

Query: 317 HHRLKIASDPMN-SANRRIDI 336
                  +   +   +RRI+I
Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297


>gi|330975634|gb|EGH75700.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 250

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 8/126 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               + L       GV  +     I + +        F   SS         L  +   L
Sbjct: 87  DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143

Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +   I I G+TD++      + N  LS  RA S    L   GV +  +  + G    
Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPD 199

Query: 319 RLKIAS 324
           +   ++
Sbjct: 200 QPIASN 205


>gi|315609087|ref|ZP_07884056.1| OmpA family protein [Prevotella buccae ATCC 33574]
 gi|315249157|gb|EFU29177.1| OmpA family protein [Prevotella buccae ATCC 33574]
          Length = 755

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   ++   +   PE+   L ++ ++L  +    I +  H D   ++     N
Sbjct: 580 ITAPVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCD---YKGSMEYN 636

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RLS  RA +    L+  G++ DR++ + G+   R K
Sbjct: 637 KRLSQRRAEAVVAYLVGHGIARDRLTPV-GYGKERPK 672


>gi|260779363|ref|ZP_05888255.1| sodium-type flagellar protein MotY precursor [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605527|gb|EEX31822.1| sodium-type flagellar protein MotY precursor [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 293

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 8/159 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            + + R Q +   +SS L     +     +      +   I+         +D+SS    
Sbjct: 140 QEWQSRDQRIEVSLSSVLFQHSYNAFSDCIANLLPYSFEDIAFTILH----YDRSSVQLN 195

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I E + H+ ++  +   T  S   + +     LS  RA          G+ 
Sbjct: 196 KASQKRLAQIAEYIRHNQDIDLVLVSTYTSNEESKSAS-QNLSEQRAEVLRDYFKSLGLP 254

Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
           EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 255 EDRI-QVQGYGRRRPVADNASPLGKDKNRRVVISLGRTQ 292


>gi|260778540|ref|ZP_05887432.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604704|gb|EEX30999.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 203

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F+  SS   P  +  ++++ + L       I ++G+            N  LS  RA
Sbjct: 81  HILFENDSSDIQPVFLTQIREMADFLKIYPSTSIELQGYASKVGNHG---HNMALSQRRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
                 L+ +GVS  RI +I GF    L    D    ++ NR++   V   +G
Sbjct: 138 EEVESALINNGVSHTRI-RIVGFGDTNLADTGDDEITHAKNRKVVATVVGHKG 189


>gi|261341331|ref|ZP_05969189.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
           ATCC 35316]
 gi|296103328|ref|YP_003613474.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|288316636|gb|EFC55574.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
           ATCC 35316]
 gi|295057787|gb|ADF62525.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 173

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172


>gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 334

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 7/92 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L  +   + +   S   I + G+TD          N +LS 
Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RA +    ++  G     ++ + G+      
Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPV 328


>gi|320194769|gb|EFW69398.1| Integral membrane protein YfiB [Escherichia coli WV_060327]
          Length = 127

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITAP 127


>gi|312965520|ref|ZP_07779752.1| ompA family protein [Escherichia coli 2362-75]
 gi|312289940|gb|EFR17828.1| ompA family protein [Escherichia coli 2362-75]
          Length = 127

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA        + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDNY---GEDSYNEVLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|167762473|ref|ZP_02434600.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
           43183]
 gi|167699579|gb|EDS16158.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
           43183]
          Length = 224

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ V        + ++     +  +F  +SS    +    L+ +
Sbjct: 75  KMDKKAAEAAKIEGAQVEMVKDANNLDAVKVTF---DSGILFTFNSSTLSNDAKASLRDL 131

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L   +T  I+I GHTD          N ++S +RAY+    L   GVS  +  ++ G
Sbjct: 132 AKILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEG 188

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             ++          S NRR+ I +   +
Sbjct: 189 VGYNE--YDESLSASENRRVVIFMYASE 214


>gi|255602974|ref|XP_002537961.1| Outer membrane protein A precursor, putative [Ricinus communis]
 gi|223514409|gb|EEF24422.1| Outer membrane protein A precursor, putative [Ricinus communis]
          Length = 295

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           +F   S+   P     L  I  VL +++  + + I G+ D        + N +LS  RA 
Sbjct: 213 LFSFDSAKLNPN-QPKLDDIANVLNNNSSIDNVVITGYADRL---GSEKYNQKLSERRAN 268

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK 321
           S  + L+  GVS +R++ + G       
Sbjct: 269 SVKEYLVSKGVSANRLNAV-GKGESNPV 295


>gi|50235103|gb|AAT70754.1| OmpA [Riemerella anatipestifer]
 gi|50235105|gb|AAT70755.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 KVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|71907527|ref|YP_285114.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847148|gb|AAZ46644.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 198

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 8/166 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTP 235
                     +R ++  D+ +                  +  T    + I     Q  T 
Sbjct: 36  QAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVKTADPAYIASTFAEVLAIEPPPPQVFTL 95

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
           MF+  ++     ++  +  I         V   I GHTDA+      + N  LSL+RA  
Sbjct: 96  MFESGTTNLTTASLDQIPNIVAASQKRPAVSVRISGHTDAT---GSDKVNDALSLERAMQ 152

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            + +L + G+   R+  ++        I +        NRR+ ++V
Sbjct: 153 VWNLLQQKGIPA-RLMSVTSHGKGNPAIPTPDGVAEPRNRRVVVIV 197


>gi|320183086|gb|EFW57948.1| Integral membrane protein YfiB [Shigella flexneri CDC 796-83]
 gi|323167728|gb|EFZ53423.1| ompA family protein [Shigella sonnei 53G]
 gi|332092191|gb|EGI97269.1| ompA family protein [Shigella boydii 3594-74]
 gi|332765583|gb|EGJ95796.1| ompA family protein [Shigella flexneri 2930-71]
 gi|333000803|gb|EGK20377.1| ompA family protein [Shigella flexneri K-218]
          Length = 127

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|318068285|gb|ADV36930.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 77/268 (28%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+       EN   P    +    + +  + 
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDV---AGPAENNGCPWPDTDNDGVLDKDDKC 227

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D+               + +       +    +          F+ + +    E+   L
Sbjct: 228 PDVP-------------GLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|259909069|ref|YP_002649425.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
           pyrifoliae Ep1/96]
 gi|292487662|ref|YP_003530535.1| peptidoglycan-associated lipoprotein [Erwinia amylovora CFBP1430]
 gi|292898899|ref|YP_003538268.1| peptidoglycan-associated lipoprotein [Erwinia amylovora ATCC 49946]
 gi|224964691|emb|CAX56208.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
           [Erwinia pyrifoliae Ep1/96]
 gi|283479095|emb|CAY75011.1| Peptidoglycan-associated lipoprotein precursor [Erwinia pyrifoliae
           DSM 12163]
 gi|291198747|emb|CBJ45856.1| peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
           ATCC 49946]
 gi|291553082|emb|CBA20127.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
           CFBP1430]
 gi|310767031|gb|ADP11981.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia sp.
           Ejp617]
 gi|312171770|emb|CBX80028.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
           ATCC BAA-2158]
          Length = 172

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L G     +  G +    +  + +  + + N   F         +   +L      L  +
Sbjct: 38  LDGSANSGMNSGNMSSDEQARLQMQELQKNNIVYFGLDKYDIQSDFAQMLDAHANFLRSN 97

Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                ++ GH D          N  L   RA +    L   GV++D+IS +S +   +  
Sbjct: 98  PSYKVTVEGHADER---GTPEYNIALGERRASAVKMYLQGKGVADDQISIVS-YGKEKPA 153

Query: 322 I--ASDPMNSANRRIDIL 337
           +    +   + NRR  ++
Sbjct: 154 VLGHDESAYAKNRRAVLV 171


>gi|89890715|ref|ZP_01202224.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89516860|gb|EAS19518.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 368

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 11/78 (14%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323
           +  HTD+         N  LS  RA S    L+  G++  RI   +G+  +RLK      
Sbjct: 292 VASHTDSR---GSKTSNQALSERRAQSVANYLISKGINNSRIVA-NGYGENRLKNRCADG 347

Query: 324 ---SDPMNSANRRIDILV 338
              ++  + ANRR    +
Sbjct: 348 VSCTEREHKANRRTTFRL 365


>gi|332668116|ref|YP_004450904.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336930|gb|AEE54031.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 662

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     +D        +    L K+ E L  + +  I +  HTD          N  LS 
Sbjct: 550 RLENIYYDLDKWDIRADAQPTLDKLAETLKLNPKVRIQLSSHTDCR---GTDVYNESLSQ 606

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRR 333
            RA SA   L+  G+   R+    G+     +        S+  +  NRR
Sbjct: 607 KRAQSAVDYLISKGIEAQRLEA-RGYGEGVPEATCACARCSEDEHQLNRR 655


>gi|251733505|emb|CAR82502.1| pal [Ensifer adhaerens]
          Length = 87

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      ++I GH D          N  L   RA S   
Sbjct: 1   TDSTSVRADAQQTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARRAASTKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLISRGVPANRLKTIS-YGKEKPVA 81


>gi|254447506|ref|ZP_05060972.1| OmpA family protein [gamma proteobacterium HTCC5015]
 gi|198262849|gb|EDY87128.1| OmpA family protein [gamma proteobacterium HTCC5015]
          Length = 1980

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI----ARDNWRLSL 289
           P F+  S+    E      +I   +     + I++ GH D  P R        DN  LSL
Sbjct: 472 PRFESFSAELGEEDQQHFDQILSQVDKQRVQRITVIGHADTRPIRARSQSIYADNQALSL 531

Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342
            RA  A +    + G+  D++  + G       +        +ANRR++I++E  Q
Sbjct: 532 ARANVAAEYARQRLGLEADKVD-VLGKGDSFPLLKGRSGEDNAANRRVEIVIESLQ 586


>gi|65321877|ref|ZP_00394836.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012]
          Length = 133

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F        T +K   
Sbjct: 14  HEEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFL 72

Query: 85  DEQNPPERSSQNKIDLSIDE 104
            +Q P +    +   L  ++
Sbjct: 73  SDQKPNDEKELSASSLETEQ 92


>gi|332088113|gb|EGI93238.1| ompA family protein [Shigella boydii 5216-82]
          Length = 127

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAQLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|50235069|gb|AAT70737.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    +L+             +++  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPELQGCPDTDGDGVPDEDDDCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C                  D+          +                  
Sbjct: 171 EVAGPVETNGCPWPDPAKDGVLDKHHACVDVAGPAENTGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|323188374|gb|EFZ73665.1| ompA family protein [Escherichia coli RN587/1]
          Length = 127

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|262166026|ref|ZP_06033763.1| outer membrane protein [Vibrio mimicus VM223]
 gi|262025742|gb|EEY44410.1| outer membrane protein [Vibrio mimicus VM223]
          Length = 278

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G     + PE+      +  ++        D  +G  +             +  +    E
Sbjct: 15  GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +       +       +   + +   L   + + ++  KR  +L+     ++S
Sbjct: 67  SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLLIQRKRLNQLEQQLDYVTS 126

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +   N    V   +    +   +        F  +S+   P+ +  L    + L  
Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKD 183

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  +S+ GH D+      +  N +L++ RA    + L   G++ +RI+  S       
Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239

Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343
               +       NRR+ I +         +QG
Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPTLSKQG 271


>gi|30314450|gb|AAP15434.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
          Length = 150

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|295395656|ref|ZP_06805848.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971472|gb|EFG47355.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 602

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 21/117 (17%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291
             +F+  S     +    +  + E L  S   + + + GHTD          N  LS  R
Sbjct: 293 DVLFEFDSDKLNKDAQKTIDSVAEELKKSAKGQKVVVEGHTDDE---GDEGYNQGLSERR 349

Query: 292 AYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPM--------NSANRRIDI 336
           A S  +     L  +G+      +  GF   +  + +            + NRR+  
Sbjct: 350 AESVKKAVEPKLSGAGIQ----LETKGFGETKPIVPNRDGKGNPIKKNQAKNRRVSF 402


>gi|90421593|ref|YP_529963.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90103607|gb|ABD85644.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 617

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             +T  F+  S    P+    LQ I + L  S      EV  I GHTDA        DN 
Sbjct: 485 DLDTITFELGSWEIPPDQAAKLQAIADGLNKSIARNPREVFLIEGHTDAV---GNDTDNL 541

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA +A Q+L +  GV  + ++   G+    LK+ +      NRR+ +
Sbjct: 542 SLSDRRAEAAAQLLTQQFGVPAENLTS-QGYGEQYLKVPTQAPERQNRRVTV 592


>gi|50235091|gb|AAT70748.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + K       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPKVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|258543662|ref|YP_003189095.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634740|dbj|BAI00716.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637796|dbj|BAI03765.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640850|dbj|BAI06812.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643905|dbj|BAI09860.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646960|dbj|BAI12908.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256650013|dbj|BAI15954.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256653003|dbj|BAI18937.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656057|dbj|BAI21984.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 160

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +D + S    +    LQK  + LA   +  + + G+ D          N  L   R
Sbjct: 55  DRVFYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR---GTEEYNIALGQRR 111

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
           A +A   L+  GV+  RIS IS +   R       +   + NR
Sbjct: 112 ANAARDYLVAKGVASSRISTIS-YGKDRPTALGDDEDAWAQNR 153


>gi|189402632|ref|ZP_02783681.2| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189406165|ref|ZP_02826729.2| OmpA family protein [Escherichia coli O157:H7 str. EC508]
 gi|189354554|gb|EDU72973.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189376183|gb|EDU94599.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
          Length = 127

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITPP 127


>gi|50235071|gb|AAT70738.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENTGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|189405293|ref|ZP_02814514.2| OmpA family protein [Escherichia coli O157:H7 str. EC869]
 gi|191169055|ref|ZP_03030818.1| OmpA family protein [Escherichia coli B7A]
 gi|193064020|ref|ZP_03045105.1| OmpA family protein [Escherichia coli E22]
 gi|194439333|ref|ZP_03071411.1| OmpA family protein [Escherichia coli 101-1]
 gi|256019576|ref|ZP_05433441.1| putative outer membrane lipoprotein [Shigella sp. D9]
 gi|301026824|ref|ZP_07190226.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|332280700|ref|ZP_08393113.1| outer membrane lipoprotein [Shigella sp. D9]
 gi|43146|emb|CAA25961.1| unnamed protein product [Escherichia coli]
 gi|189370879|gb|EDU89295.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
 gi|190900896|gb|EDV60682.1| OmpA family protein [Escherichia coli B7A]
 gi|192929255|gb|EDV82864.1| OmpA family protein [Escherichia coli E22]
 gi|194421695|gb|EDX37704.1| OmpA family protein [Escherichia coli 101-1]
 gi|299879570|gb|EFI87781.1| OmpA family protein [Escherichia coli MS 196-1]
 gi|315615303|gb|EFU95938.1| ompA family protein [Escherichia coli 3431]
 gi|323159124|gb|EFZ45117.1| ompA family protein [Escherichia coli E128010]
 gi|323184520|gb|EFZ69894.1| ompA family protein [Escherichia coli 1357]
 gi|332103052|gb|EGJ06398.1| outer membrane lipoprotein [Shigella sp. D9]
 gi|332344474|gb|AEE57808.1| outer membrane protein OmpA [Escherichia coli UMNK88]
          Length = 127

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|261253570|ref|ZP_05946143.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
           102891]
 gi|260936961|gb|EEX92950.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
           102891]
          Length = 293

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           +D++S     ++   L +I E + H+ ++  +    +TDA   ++ +     LS  RA  
Sbjct: 187 YDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSAS---QNLSERRAEV 243

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 244 LQNYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLGRTQ 292


>gi|90411166|ref|ZP_01219179.1| putative outer membrane protein [Photobacterium profundum 3TCK]
 gi|90328012|gb|EAS44333.1| putative outer membrane protein [Photobacterium profundum 3TCK]
          Length = 196

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           E     ++ +  +D  K          AD     ++        +    +     +F   
Sbjct: 21  EDPPIAEQSQDQRDFDKDGVINARDKCADTPHSAIVDNDGCPTSINREEENDVRVLFAND 80

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S+      +  +Q++ + L    E  I ++G+         +  N  LS  RA    + L
Sbjct: 81  STAIPEAFLSEIQRMADFLDVYPEAYIELKGYASPV---GNSEYNIGLSKRRATKVREQL 137

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343
           +  GV+  RI  I GF       A +   + N   RR+   V   +G
Sbjct: 138 IAEGVAPQRIKTI-GFGDAEPIAA-ESSEATNTLSRRVVARVIGSKG 182


>gi|300775077|ref|ZP_07084940.1| outer membrane protein A [Chryseobacterium gleum ATCC 35910]
 gi|300506892|gb|EFK38027.1| outer membrane protein A [Chryseobacterium gleum ATCC 35910]
          Length = 503

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 75/270 (27%), Gaps = 23/270 (8%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                N   AS  I       +R     +D       T    + +             ++
Sbjct: 210 KSTVANFWQASASILFRFGNRDRDKDGILDKDDLCPDTPGLPEFQGCPDTDGDGVPDKDD 269

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
               ++   ++  C    T D +   D   +        +      P    +        
Sbjct: 270 QCPDVAGPVENNGCPWPDT-DGDGVIDKDDACPTVAGPAENNGCPWPDTDGDG------- 321

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                    +    +      + +       +      +     +  FD + +   PE+ 
Sbjct: 322 --------ILDKDDACPTVPGLPEYNGCPKPKEVTATDVEKNLKSVYFDFNKATIKPESK 373

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
             L    E++        + G TD    +     N +LS +RA S    L   GV  + +
Sbjct: 374 GALDTAAEIIKKDGGRFLLVGETDK---KGSDAYNLKLSKERAASVVAALDARGVDTNVL 430

Query: 310 SKISGFAHHRLKI---ASDPMNSANRRIDI 336
             I G      K+   ASD    ++R++ +
Sbjct: 431 KSI-GIGEQNAKVAESASDAERQSDRKVTV 459


>gi|153877559|ref|ZP_02004282.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
 gi|152065977|gb|EDN65718.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
          Length = 188

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F    S        +L++    L  + E  + + GH D          N  L  
Sbjct: 82  SERIIYFGYDMSNIKSNARTILEQHAAYLTQNPEIYVRLEGHADER---GSREYNLALGE 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
            RA +A   L+  GV E +++ +S +   R      ++     NRR++++
Sbjct: 139 RRAETAKNTLIMLGVFETQVTTLS-YGEERPQTFEHNEQSWQQNRRVELV 187


>gi|56460187|ref|YP_155468.1| peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
 gi|56179197|gb|AAV81919.1| Peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
          Length = 178

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 7/167 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            +  L+                     +     V                  +  + + +
Sbjct: 15  PMATLAACSSNQETDSGMGAGQEINQQAEQDSGVEVGAADRAQRMEEERQQKMEALRKEH 74

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              F    S    E   +L    + L  +  V  +  GHTD          N  L   RA
Sbjct: 75  IVYFAFDKSNVQSEYTDLLSAHADYLVKNPSVKVVIEGHTDER---GTPEYNIALGERRA 131

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            +    L   GV + + S +S +   +  +  +++   + NRR  ++
Sbjct: 132 KAVESYLHNLGVQDSQTSTVS-YGEEKPMVNGSNERAYAKNRRAVLV 177


>gi|320177022|gb|EFW52043.1| Integral membrane protein YfiB [Shigella dysenteriae CDC 74-1112]
          Length = 127

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGITHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|315498692|ref|YP_004087496.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
           48]
 gi|315416704|gb|ADU13345.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
           48]
          Length = 184

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 10/125 (8%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
           +        ++   ++++ D+     F+   S    +   +L K    L       + I 
Sbjct: 56  LSPTGPVPGSQQDFVVNVGDR---VFFELDQSSLREDAKALLDKQAAWLVRYPAVKVRIE 112

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+ D          N+ L   RA S  Q L   GV   RIS IS +             +
Sbjct: 113 GNADER---GTREYNFALGARRAESVSQYLTSKGVVPSRISTIS-YGKENPIATGTDEEA 168

Query: 330 --ANR 332
              NR
Sbjct: 169 WSQNR 173


>gi|149192088|ref|ZP_01870312.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
 gi|148834074|gb|EDL51087.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
          Length = 174

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F   +S    +   +L      L    +  ++I GH D          N  L  
Sbjct: 68  ENQTIYFAFDNSTIAGDYEDMLAAHAAYLSKDPSLKVTIEGHADER---GTPEYNIALGE 124

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            RA +  + +   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 125 RRAQAVAKYIQALGVQADQISIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 173


>gi|89899949|ref|YP_522420.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89344686|gb|ABD68889.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 181

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 224 ILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
           I IS +D  N+P+      F   +       + +++   + LA +    + + G+ D   
Sbjct: 59  IAISPLDDANSPLAKRSVFFGFDNFQIRSSDLPLIEAHAKYLAANKSAKVRLEGNADER- 117

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334
                  N  L   RA +  + L   GV +  +  +S F   +   A  ++   + NRR+
Sbjct: 118 --GGREYNLALGQKRAEAVRRSLRLLGVPDSSLEAVS-FGMEKPVDAGHNEDAWAKNRRV 174

Query: 335 DI 336
           D+
Sbjct: 175 DL 176


>gi|71280451|ref|YP_270642.1| ompA family protein [Colwellia psychrerythraea 34H]
 gi|71146191|gb|AAZ26664.1| ompA family protein [Colwellia psychrerythraea 34H]
          Length = 278

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 8/232 (3%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
           + +T      +++        N                 G  +     +  +     N  
Sbjct: 35  VNATENTLPPEKIHQEATNEENIGFGTGAVIGAIVAGPLGAIVAGIGGVFVAKYINVNDQ 94

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              LS   +   ++++  + +  +  + L  L A    + V  ET +        D    
Sbjct: 95  NDELSTALVNEQRKQRSNEQIQSQYQAKLQRLEASYQQQLVALETQQHDSGQLQADNLLM 154

Query: 235 PM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
            + F   SS   P     +  + ++L  S E+   + G+TD+         N  LS  R 
Sbjct: 155 SLQFSTGSSDIAPHYQEQVAALAQILNSSPEMKIDLSGYTDSI---GEQSLNQTLSQARV 211

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            S   +LM  GV E +I+  + F      +A++    +  +RR+ + +    
Sbjct: 212 ESVRTLLMAQGVEEQQIATFA-FGEESPVVANNESEVSFYDRRVVLKLHTPP 262


>gi|24216275|ref|NP_713756.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24197541|gb|AAN50774.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 275

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L+K           +     V       G++IS++       F+  S+I      + L
Sbjct: 87  KALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKIAL 143

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302
           +K   ++ +    + + GH DA+                +NW L+  RA ++   ++   
Sbjct: 144 RKASSLIKNLNRFVRVEGHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVE 203

Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342
            +       +S F   R        +    + NRRIDI++   +
Sbjct: 204 KLDPSWFQAVS-FGAFRPLVVEYAGTPEAKAYNRRIDIVIMTEK 246



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K    +   N+  + + Y D +T+L+ FF++++    T+    + I   F          
Sbjct: 3   KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
                        + ++    +  + ++K+
Sbjct: 63  QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92


>gi|134294843|ref|YP_001118578.1| OmpA domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134138000|gb|ABO53743.1| OmpA domain protein [Burkholderia vietnamiensis G4]
          Length = 170

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 68  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 167


>gi|83647670|ref|YP_436105.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83635713|gb|ABC31680.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 346

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLS 288
           +R    F    S+   +    L K+   +     V    + GHTD++        N RLS
Sbjct: 218 ERTAVFFKLDESVLTDQDKRELDKVVLYVKADPSVTAIFVDGHTDST---GRRIYNRRLS 274

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            DRA +    LM  GV+ ++I+           + +      + NRR  + +E 
Sbjct: 275 KDRAEAVTAYLMDKGVASEKITT-RYHGERYPVVQNAGPKNLARNRRATVRLER 327


>gi|318068271|gb|ADV36923.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|313206517|ref|YP_004045694.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312445833|gb|ADQ82188.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
 gi|325336035|gb|ADZ12309.1| outer membrane protein A [Riemerella anatipestifer RA-GD]
          Length = 488

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 212 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 271

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 272 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 315

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 316 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 375

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 376 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 432

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 433 -KGVGSAEATVPASASNEERMKDRKVVV 459


>gi|225024677|ref|ZP_03713869.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
           23834]
 gi|224942566|gb|EEG23775.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
           23834]
          Length = 230

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI 280
             +   ++   +  +F        PE    L ++ + L+  + + + + G+TD   F   
Sbjct: 86  PQVREELVSLSSNFLFGFDKFNLRPEARTTLDELAQRLSGSNVQSVRVEGNTD---FMGS 142

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSAN--RRI 334
              N RLS  RA +  + L+  GV  ++IS + G    + K+         N  RR+
Sbjct: 143 DAYNQRLSERRANTVSEYLVGRGVPAEKISAV-GLGESQAKMTEQCQQEVRNLGRRV 198


>gi|167374417|gb|ABZ79138.1| outer membrane protein [Riemerella anatipestifer]
          Length = 338

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 88  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 147

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 148 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 191

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 192 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 251

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 308

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335


>gi|146310897|ref|YP_001175971.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
           sp. 638]
 gi|145317773|gb|ABP59920.1| OmpA domain protein [Enterobacter sp. 638]
          Length = 173

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 68  NNIVYFDLDKFDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
           RA +    L   GVS D+IS +S +   +  +      +   NRR  ++
Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172


>gi|67005885|gb|AAY62590.1| OmpA [Riemerella anatipestifer]
          Length = 390

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|30314444|gb|AAP15431.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
          Length = 149

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 47  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146


>gi|7339731|gb|AAF60955.1|AF104937_1 outer membrane protein A precursor [Riemerella anatipestifer DSM
           15868]
 gi|50235063|gb|AAT70734.1| OmpA [Riemerella anatipestifer]
 gi|50235101|gb|AAT70753.1| OmpA [Riemerella anatipestifer]
 gi|126046403|gb|ABN73091.1| OmpA [Riemerella anatipestifer]
 gi|126046426|gb|ABN73095.1| OmpA [Riemerella anatipestifer]
 gi|225350118|gb|ACN87969.1| OmpA [Riemerella anatipestifer]
 gi|225350120|gb|ACN87970.1| OmpA [Riemerella anatipestifer]
 gi|225350122|gb|ACN87971.1| OmpA [Riemerella anatipestifer]
 gi|225350124|gb|ACN87972.1| OmpA [Riemerella anatipestifer]
 gi|225350126|gb|ACN87973.1| OmpA [Riemerella anatipestifer]
 gi|257359510|gb|ACV53155.1| OmpA [Riemerella anatipestifer]
 gi|296280735|gb|ADH04665.1| OmpA [Riemerella anatipestifer]
 gi|318068273|gb|ADV36924.1| outer membrane protein A [Riemerella anatipestifer]
 gi|318068281|gb|ADV36928.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|22126930|ref|NP_670353.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis KIM 10]
 gi|45440865|ref|NP_992404.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108806600|ref|YP_650516.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Antiqua]
 gi|108813033|ref|YP_648800.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Nepal516]
 gi|145599836|ref|YP_001163912.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Pestoides F]
 gi|149366875|ref|ZP_01888909.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
           CA88-4125]
 gi|162418864|ref|YP_001605923.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Angola]
 gi|165924580|ref|ZP_02220412.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938361|ref|ZP_02226919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011606|ref|ZP_02232504.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211496|ref|ZP_02237531.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400048|ref|ZP_02305566.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419890|ref|ZP_02311643.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424166|ref|ZP_02315919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218928293|ref|YP_002346168.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis CO92]
 gi|229841062|ref|ZP_04461221.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229843166|ref|ZP_04463312.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229894003|ref|ZP_04509189.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Pestoides A]
 gi|229903473|ref|ZP_04518586.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Nepal516]
 gi|270487253|ref|ZP_06204327.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
 gi|294503130|ref|YP_003567192.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
 gi|21959969|gb|AAM86604.1|AE013906_8 peptidoglycan-associated lipoprotein [Yersinia pestis KIM 10]
 gi|45435723|gb|AAS61281.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776681|gb|ABG19200.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Nepal516]
 gi|108778513|gb|ABG12571.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Antiqua]
 gi|115346904|emb|CAL19791.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CO92]
 gi|145211532|gb|ABP40939.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Pestoides
           F]
 gi|149291249|gb|EDM41324.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
           CA88-4125]
 gi|162351679|gb|ABX85627.1| peptidoglycan-associated lipoprotein [Yersinia pestis Angola]
 gi|165913739|gb|EDR32358.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923640|gb|EDR40772.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989554|gb|EDR41855.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207267|gb|EDR51747.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962631|gb|EDR58652.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050756|gb|EDR62164.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057015|gb|EDR66778.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229679243|gb|EEO75346.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Nepal516]
 gi|229689513|gb|EEO81574.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229697428|gb|EEO87475.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229703888|gb|EEO90901.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis Pestoides A]
 gi|262361166|gb|ACY57887.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D106004]
 gi|262365277|gb|ACY61834.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D182038]
 gi|270335757|gb|EFA46534.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
 gi|294353589|gb|ADE63930.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
 gi|320014265|gb|ADV97836.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 168

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF 277
             +  + +  + + N   F         +   +L      L  +  + + + GH D    
Sbjct: 50  EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSDKVVVEGHADER-- 107

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 108 -GTPEYNIALGERRASAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165

Query: 336 IL 337
           ++
Sbjct: 166 LV 167


>gi|311694109|gb|ADP96982.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 305

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
           QR+   F   S+        +L  I   +    + E I + GH+D+        DN  LS
Sbjct: 182 QRSRVPFASGSTQLSDADRQLLDNIVAYVNADSTVERIFVDGHSDSI---GSRIDNRALS 238

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            DRA      L  SG+ E+ +  +          ++ P +  NRR +I ++ 
Sbjct: 239 EDRANVVADYLKASGIDEN-MITVRAHGDQYPV-SNRPAD--NRRTNIRLQR 286


>gi|291276673|ref|YP_003516445.1| peptidoglycan associated lipoprotein [Helicobacter mustelae 12198]
 gi|290963867|emb|CBG39703.1| peptidoglycan associated lipoprotein (omp18) [Helicobacter mustelae
           12198]
          Length = 169

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 22/166 (13%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                    A K ++  + + + ++        D +  G +                 + 
Sbjct: 18  AKKEVAIDEAPKVQQEEEPVQENVAKAPEPKKKDILQDGTVV---------------GSV 62

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            F        P    V+    E +  + ++  +  G+TD          N+ LS  RA +
Sbjct: 63  YFAYDQYNIPPSMSDVIDSSVEKINENPDMNVVVEGNTDEF---GSDEYNFALSNKRAMA 119

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
               L+  G+S+++I  I      +             NRR DI +
Sbjct: 120 VQSALITRGISKNKI-SILSLGKTKPVCTEKREECYQKNRRGDIRL 164


>gi|281421188|ref|ZP_06252187.1| OmpA family protein [Prevotella copri DSM 18205]
 gi|281404723|gb|EFB35403.1| OmpA family protein [Prevotella copri DSM 18205]
          Length = 660

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L  D+  +   +        I+     +   +D   +     +   L ++  +L  + 
Sbjct: 492 EELRVDSAKESKEYVLQFPLASITAPVLIDNIFYDFDKATLTEASTTALDQLVTLLKENP 551

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
              I +  H D   ++  +  N  LS  RA S    L+K G+ ++R++ + G+   + K 
Sbjct: 552 HVTIELSAHCD---YKGNSEYNKHLSQRRAQSVVDYLIKHGIEKERLTPV-GYGKEKPKN 607


>gi|163802824|ref|ZP_02196713.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
 gi|159173364|gb|EDP58187.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
          Length = 293

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +++ +  +TD++  ++ +     LS  RA S        G+SEDRI ++ G+   R
Sbjct: 212 NQDIDLVLVSTYTDSTDGKSTS---QNLSERRAESLRTYFESLGLSEDRI-QVQGYGKRR 267

Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342
               +        NRR+ I +   Q
Sbjct: 268 PIADNGSPIGKDKNRRVVISLGRTQ 292


>gi|30314418|gb|AAP15418.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
 gi|30314424|gb|AAP15421.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
 gi|30314448|gb|AAP15433.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
          Length = 150

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|24212922|ref|NP_710403.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193591|gb|AAN47421.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 195

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 53/174 (30%), Gaps = 19/174 (10%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                  +        +++     + +       +AD++ + +              D  
Sbjct: 22  SSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYP--------DGL 73

Query: 233 NTPMFDKSSSIPLP-ETIVVLQKIGEVLAH------STEVISIRGHTDA---SPFRNIAR 282
             P F    +   P +     +    V+         +  + I GHTDA          +
Sbjct: 74  TRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLRKLPDSYALEITGHTDAIGPEQAEGAKK 133

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            N   S  RA +  Q L+K G+  +RI    G          D  ++ NRR+  
Sbjct: 134 GNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLDAKDAKNRRVTF 186


>gi|114563969|ref|YP_751483.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114335262|gb|ABI72644.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 215

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               FD   S+ L      L ++ + +    +V I + GHTD          N  LSL R
Sbjct: 107 QPVYFDFDKSVVLLTQRPTLVRVQQYIEQHPQVAIRLEGHTDNI---GSDAVNRSLSLKR 163

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A +   +L+ +       I +I G ++      +        NRR++ ++
Sbjct: 164 AATIKDLLVNEYQFQPTSI-EIVGMSNKNPVADNATIEGRQRNRRVEFII 212


>gi|308048254|ref|YP_003911820.1| hypothetical protein Fbal_0532 [Ferrimonas balearica DSM 9799]
 gi|307630444|gb|ADN74746.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
          Length = 3058

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 7/138 (5%)

Query: 204  SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                 D  +   +     T      ++     +F   S+       VVLQ + E LA   
Sbjct: 2914 QDACPDTPMTHAVDGRGCTLWRTEAMELELVLLFANDSATIPATYDVVLQNLSEQLAPLA 2973

Query: 264  EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            +   +  GH  A      +R N  LS  RA +  + L + GV    I+ ++        +
Sbjct: 2974 DYQVVIEGHASA---PASSRYNLSLSERRAQAVGEALNQRGVESANITYVA-RGEEMPAV 3029

Query: 323  ASDPMNS--ANRRIDILV 338
            A +  ++   NRR  ++V
Sbjct: 3030 AGNTEHAYGQNRRAVVMV 3047


>gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
 gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi]
 gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
          Length = 403

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD + +    E   VL      + +    T  I + G+TD          N +LS 
Sbjct: 280 SDVLFDFAKADLKQEAAQVLDATNTEIVNLGLATPAIQVNGYTDRI---GSGDVNLKLSQ 336

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    L+  G +   I+ + G+        +               + +RR+++ +
Sbjct: 337 RRAETVANYLVAKGQNPVSINAV-GYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQI 395

Query: 339 EDRQ 342
           +  +
Sbjct: 396 QGTK 399


>gi|37525408|ref|NP_928752.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784836|emb|CAE13749.1| peptidoglycan-associated lipoprotein precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 166

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
             N   F         +   +L      L  +     +  GH D          N  L  
Sbjct: 60  NNNIVYFGFDKYDINSDFTQLLDAHAAFLRSNPSYKVVVEGHADER---GTPEYNIALGE 116

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RA +    L   GVS ++IS +S +   +  +        + NRR
Sbjct: 117 RRANAVKMYLQGKGVSGEQISIVS-YGKEKPAVLGHDEAAYAKNRR 161


>gi|271963004|ref|YP_003337200.1| OmpA/MotB domain-containing protein [Streptosporangium roseum DSM
           43021]
 gi|270506179|gb|ACZ84457.1| OmpA/MotB domain protein [Streptosporangium roseum DSM 43021]
          Length = 193

 Score = 72.7 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +  +F    ++   +    L+ +   +    +  V+ I GHTD          N RLSL 
Sbjct: 79  SDVLFALDRAVLTAKAAARLRGVAGRVKTESAGGVVKIVGHTDDQ---GTDAYNDRLSLR 135

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILVEDR 341
           RA +  + L      +    + +G    + K+ +       +   + NRR++I+   +
Sbjct: 136 RAQAVQEGLRALLSGQSVTFEATGLGERQPKVPNVVDGRPVEENRARNRRVEIVFTAK 193


>gi|222111846|ref|YP_002554110.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
 gi|221731290|gb|ACM34110.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
          Length = 233

 Score = 72.7 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 59/205 (28%), Gaps = 19/205 (9%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            + SL       +    +   +   +      +P  ++ ++ A      L   A+     
Sbjct: 33  SRQSLAATPTHLQPADAAPLTQLQPHVTHGGLVPRETETRLQAAAGPATLLRAAEVPPQR 92

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L           V  +   T      ID     +FD   +    +    L K  E+L   
Sbjct: 93  LEQT----HALLVELQAQPTPEQAISIDLPADVLFDFDKAELRADAARSLDKAAELLKSY 148

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            +  I + GHTD    +     N  LS  RA +    L        R     G    +  
Sbjct: 149 PQAPIDVVGHTD---GKGGDTYNDALSQRRAAAVAAALQSR---TGRPIATRGMGKRQPV 202

Query: 322 IASDP--------MNSANRRIDILV 338
             +              NRR+ I++
Sbjct: 203 APNTTPDGRDDPDGRQRNRRVQIVI 227


>gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida]
          Length = 351

 Score = 72.7 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 5/119 (4%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 208 VTAGLSYRFGQTVYVPEVVNKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 267

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         +
Sbjct: 268 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGN 322


>gi|82703826|ref|YP_413392.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
 gi|82411891|gb|ABB76000.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 175

 Score = 72.7 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 8/159 (5%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
                      ++D  +   +  +                      SI+ +R+   FD  
Sbjct: 17  ASQTKQPGDADMEDRDRSRDAAAAQREGMQAEDYTSPTLNPLTDPNSILSKRS-IYFDFD 75

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S +   E   ++    + L       + ++G+TD          N  L   RA +    +
Sbjct: 76  SYVVKDEFRSLVAAHAKYLREHPNARVLLQGNTDER---GSREYNLALGQRRADAVKYAM 132

Query: 300 MKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             SG  E +I  +S     +       +   + NRR+DI
Sbjct: 133 TLSGAQEGQIEAVS-LGEEKPHAMGHDEAAWAENRRVDI 170


>gi|296313331|ref|ZP_06863272.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
 gi|296840145|gb|EFH24083.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
          Length = 231

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHT 272
            V         +   +      +F     +   E    L+ + + L   + + + + GHT
Sbjct: 71  PVAVVEQAPQYVDETVSLSAKTLFGFDKDVLRAEAQDNLKVLAQRLGQTNVQSVRVEGHT 130

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           D   F    + N  LS  RA      L+ +GV   + S + G    +
Sbjct: 131 D---FMGSEKYNQTLSERRANVVANYLVSNGVPASKTSAV-GLGESQ 173


>gi|269963139|ref|ZP_06177474.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
 gi|269832103|gb|EEZ86227.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
          Length = 173

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 73  FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D+IS +S +   +  +     +  + NRR  ++
Sbjct: 130 SNYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 172


>gi|213964189|ref|ZP_03392425.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
 gi|213953156|gb|EEB64502.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
          Length = 399

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 74/227 (32%), Gaps = 8/227 (3%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           +K  +     S N +K +Q     +    N    +  K++    ++  +          +
Sbjct: 168 SKQQLTYDTKSANGQKGFQGNHFTLTAGLNIAIGKQGKHADWAGADMREQEEDVAQRIAA 227

Query: 167 INKEENYFLPPLSKEK--ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +          ++ ++  +      +   ++   ++        + +       +     
Sbjct: 228 LESNVADLKGEVANKQNRMNDANGNRIPDEIESYLNDNYQAKAGNAVANDSDVASGDVA- 286

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
              I     +  FD +SS P   +   +  +G+ +  +    I++ G+ D          
Sbjct: 287 ADLIRKGYISAYFDFNSSEPQVSSSWSIDFVGKYMKENPNAHITVNGYADEL---GGTNY 343

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           N  LS  RA +   +L+K+G+  +RI+   G         + P    
Sbjct: 344 NTTLSQKRADAVKNLLVKAGIDANRITA-QGKGVDNSVDKNSPKARQ 389


>gi|330888144|gb|EGH20805.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 71

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           N +LS DRA +   VLM  GV E RI  + G+       A+      + NRR++I+  D 
Sbjct: 5   NLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVEIVFSDE 63

Query: 342 QG 343
           +G
Sbjct: 64  KG 65


>gi|226330927|ref|ZP_03806445.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
 gi|225201722|gb|EEG84076.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
          Length = 175

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 7/112 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
            +  + Q+N   F         +   +L      L  +    I++ GH D          
Sbjct: 63  QLEQLKQQNIVYFGFDKYDISSDYANLLDAHAAFLRANPSVRITVEGHADER---GTPEY 119

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           N  L   RA +    L   GVS +++S +S +   +  +        + NRR
Sbjct: 120 NIALGERRANAVKMYLQGKGVSAEQLSIVS-YGKEKPAVLGHDEAAYAKNRR 170


>gi|254463781|ref|ZP_05077192.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
 gi|206684689|gb|EDZ45171.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
          Length = 310

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271
           + V        + +         +F+  S+         L ++ E LA + E   +  GH
Sbjct: 182 RPVRPVELAKVLDVRGHAVLADLVFESGSTRLREGRYDSLVQLAEYLAANPEYRLLLVGH 241

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330
           TD          N  +S  RA S  + L++  G  E +I  ++G        ++      
Sbjct: 242 TDTV---GSQEQNAGISERRAQSVKERLIEAYGAEESQIG-VAGAGFLAPIASNLTPEGR 297

Query: 331 --NRRIDILVEDR 341
             NRR++ ++   
Sbjct: 298 EANRRVEAVLLAD 310


>gi|187924070|ref|YP_001895712.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187715264|gb|ACD16488.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 204

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD ++    PE+   +QK+  VLA        + GHTD          N RLS+ RA
Sbjct: 101 FFLFDSAT-ELAPESAATVQKLKTVLATWPAPQLVVVGHTD---LAGSQEFNDRLSMQRA 156

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            +    L+K G+   RI   +        + +     +  NRR  I ++
Sbjct: 157 QTVAAFLIKQGIPAQRIETAA-RGKREPLVPTADGVPHRMNRRAVITIQ 204


>gi|254437176|ref|ZP_05050670.1| OmpA family protein [Octadecabacter antarcticus 307]
 gi|198252622|gb|EDY76936.1| OmpA family protein [Octadecabacter antarcticus 307]
          Length = 189

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 32/104 (30%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +F              L    +          I GHTD+         N  LS  RA   
Sbjct: 91  LFANDEDRIANSDKQRLMAFFQ--QADAFGFLIYGHTDS---NASDEYNIDLSNRRASMV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             V   +G    R+  I GF   R    +      + NRR+++ 
Sbjct: 146 AGVAQDAG---TRVVDIRGFGERRPAATNATQDGRAQNRRVEVY 186


>gi|320182481|gb|EFW57375.1| Integral membrane protein YfiB [Shigella boydii ATCC 9905]
          Length = 127

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   L  +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLTSTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           A          G          G        ++      + NRR+ +++   
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127


>gi|296534564|ref|ZP_06896978.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
 gi|296265104|gb|EFH11315.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
          Length = 97

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + GH D        + N RLS  RA +    L++ GV+   I  +  F   R  + +   
Sbjct: 28  VAGHADR---AGSPQYNQRLSQRRADAVAAELVRLGVARSAI-SVQAFGESRPLVPTADG 83

Query: 328 --NSANRRIDILVE 339
                NRR++I++ 
Sbjct: 84  VREPQNRRVEIVLR 97


>gi|296104273|ref|YP_003614419.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058732|gb|ADF63470.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 161

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +T +FDK+ +   PE+   ++ +   LA +  +   + GHTD          N  LSL R
Sbjct: 53  DTILFDKNDARLRPESEAQIRTMASRLAATGLKHARMDGHTDNY---GEESYNEALSLKR 109

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A +   V  K + +    ++   G        ++      + NRR+ +++
Sbjct: 110 ANAVADVWAKGANIPRSNLTT-QGLGKKYPVSSNSTAQGRAENRRVAVVI 158


>gi|261378312|ref|ZP_05982885.1| OmpA family protein [Neisseria cinerea ATCC 14685]
 gi|269145408|gb|EEZ71826.1| OmpA family protein [Neisseria cinerea ATCC 14685]
          Length = 257

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 5/121 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +        D   +           +   +      +F     +   E    L  + + L
Sbjct: 57  AEQGRVECGDAAPQAPTVIEQAPQYVDETVSLSAKTLFGFDKDVLRVEAQENLNVLAQRL 116

Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              + + + + GHTD   F    + N  LS  RA      L+  GV   +IS   G    
Sbjct: 117 GQTNVQAVRVEGHTD---FMGAEKYNQELSERRANVVANYLVGRGVPAAKISAA-GLGES 172

Query: 319 R 319
           +
Sbjct: 173 Q 173


>gi|193885364|pdb|3CYP|B Chain B, The Crystal Structure Of The C-Terminal Domain Of
           Helicobacter Pylori Motb (Residues 125-256).
 gi|193885365|pdb|3CYP|C Chain C, The Crystal Structure Of The C-Terminal Domain Of
           Helicobacter Pylori Motb (Residues 125-256).
 gi|193885366|pdb|3CYP|D Chain D, The Crystal Structure Of The C-Terminal Domain Of
           Helicobacter Pylori Motb (Residues 125-256).
 gi|193885367|pdb|3CYP|E Chain E, The Crystal Structure Of The C-Terminal Domain Of
           Helicobacter Pylori Motb (Residues 125-256).
 gi|193885368|pdb|3CYQ|B Chain B, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885369|pdb|3CYQ|C Chain C, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885370|pdb|3CYQ|D Chain D, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885371|pdb|3CYQ|E Chain E, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885372|pdb|3CYQ|F Chain F, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885373|pdb|3CYQ|G Chain G, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885374|pdb|3CYQ|H Chain H, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885375|pdb|3CYQ|I Chain I, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885376|pdb|3CYQ|A Chain A, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885377|pdb|3CYQ|J Chain J, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885378|pdb|3CYQ|K Chain K, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885379|pdb|3CYQ|L Chain L, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885380|pdb|3CYQ|M Chain M, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885381|pdb|3CYQ|N Chain N, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885382|pdb|3CYQ|O Chain O, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|193885383|pdb|3CYQ|P Chain P, The Crystal Structure Of The Complex Of The C-Terminal
           Domain Of Helicobacter Pylori Motb (Residues 125-256)
           With N-Acetylmuramic Acid
 gi|302148709|pdb|3IMP|B Chain B, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148710|pdb|3IMP|C Chain C, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148711|pdb|3IMP|D Chain D, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148712|pdb|3IMP|E Chain E, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148713|pdb|3IMP|A Chain A, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148714|pdb|3IMP|F Chain F, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148715|pdb|3IMP|G Chain G, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148716|pdb|3IMP|H Chain H, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148717|pdb|3IMP|I Chain I, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148718|pdb|3IMP|J Chain J, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148719|pdb|3IMP|K Chain K, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
 gi|302148720|pdb|3IMP|L Chain L, New Crystal Form Of The C-Terminal Domain Of Helicobacter
           Pylori Motb (Residues 125-256)
          Length = 138

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQ 297
           S     + ++ +++I +++    +   I++RG TD +P  +   + ++ L+ +RAY   +
Sbjct: 12  SDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMK 71

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           VL++ GV+ +++   S +        +D       N R++I 
Sbjct: 72  VLIQYGVNPNQL-SFSSYGSTNPIAPNDSLENRMKNNRVEIF 112


>gi|251733531|emb|CAR82515.1| pal [Ensifer adhaerens]
 gi|251733533|emb|CAR82516.1| pal [Ensifer adhaerens]
 gi|251733535|emb|CAR82517.1| pal [Ensifer adhaerens]
          Length = 87

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I+I GH D          N  L   RA S   
Sbjct: 1   TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLISQGVPANRMKTIS-YGKEKPVA 81


>gi|103485733|ref|YP_615294.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
 gi|98975810|gb|ABF51961.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
          Length = 170

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
               +F  + S    E    ++ I   L         + GHTD++     +  N  LS  
Sbjct: 58  PERLLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDST---GSSAYNLTLSRA 114

Query: 291 RAYSAYQVLMKSGV--SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           RA +    +   G+  + D+I    G         +D       NRR+ ++V 
Sbjct: 115 RAEAVAAPMRAGGMTFTADQIV---GRGETLPLSGNDTAEGRQDNRRVVVIVT 164


>gi|304392317|ref|ZP_07374258.1| OmpA/MotB [Ahrensia sp. R2A130]
 gi|303295421|gb|EFL89780.1| OmpA/MotB [Ahrensia sp. R2A130]
          Length = 567

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
              D     D        +      + F P +S +  +  + +         I +     
Sbjct: 365 PNGDEVVLIDNQDIEAAPQRRVIVLDPFTPQISDDLYVVEQDRADSDAYRTAIEAEPVEE 424

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-- 264
                    + +  R    +  ID  N   F+  S+   P  +  L+++G  L    +  
Sbjct: 425 AERAYSLREVRDNQRLRAKVRRID-LNAINFNTGSASVTPSQVDKLEELGIALERHIKAN 483

Query: 265 ---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320
              V  + GHTDA         N  LS  RA +  ++L+++  V  + I    G+    L
Sbjct: 484 PRAVFLMEGHTDAV---GSDVSNLTLSDRRAETVARILIENFAVPAENIVT-QGYGESDL 539

Query: 321 KIASDPMNSANRRIDI 336
           K+ ++  N+ NRR+ +
Sbjct: 540 KVRTEAANADNRRVTV 555


>gi|171321509|ref|ZP_02910450.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
 gi|171093217|gb|EDT38424.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
          Length = 169

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + +   +   + NRR D++
Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166


>gi|241666858|ref|YP_002984942.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862315|gb|ACS59980.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 189

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224
             +        P     +  ++      DLA  +    +               +  + +
Sbjct: 18  PGHPFAQELSGPQVVRTLDRLQGGAPAIDLALLMEEAAASAGKGLAGLPDWQKLSKLSQL 77

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281
           ++ I        F+  S    P++   +  I + L H         + GHT ++     A
Sbjct: 78  IVEID-------FENDSIAIEPKSYRTVGMIADALHHPNLRRYKFLVVGHTSST---GDA 127

Query: 282 RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           + N  LS  RA +  + L     ++ DR+  I G         S+P  + NRR+ ++
Sbjct: 128 KHNLDLSQKRANAITEALSTTFSIAPDRLFAI-GVGEEWPGDPSNPQAADNRRVQLV 183


>gi|42527533|ref|NP_972631.1| OmpA family protein [Treponema denticola ATCC 35405]
 gi|41818118|gb|AAS12542.1| OmpA family protein [Treponema denticola ATCC 35405]
          Length = 1338

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 91/311 (29%), Gaps = 25/311 (8%)

Query: 52   WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----------QNKIDL 100
            W I  +D ++ K   ++ +     L+          N                 +  I  
Sbjct: 1026 WNIQISDVESGKVFAEWTSKKDGKLLKKLVWDGKSGNSKAPDGRYMATMYIEYKKGDIVT 1085

Query: 101  SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR-DSEKGKDLCK 159
            +  E    ++   KIG + + K +    +              K  +     E  +    
Sbjct: 1086 AFTEDFILSTQAPKIGVSTKPKYFSPDNDGTDDDLYISLKADSKAGIENWKFEITEPEEN 1145

Query: 160  STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
               L      +E      +   + L+ +  +   D     + T    +       +  + 
Sbjct: 1146 GGKLFWKTGGKEKITNELIWDGRSLSGETVQSATDYPFTFTVTDKVGLTSVYRGYIPVDI 1205

Query: 220  TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGH 271
                    +     + +F  +++        ++ K   +L              + + GH
Sbjct: 1206 LVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGH 1265

Query: 272  TDASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PM 327
             + +             LS  RA +  Q L+K G+   R+S I G    +   + +D   
Sbjct: 1266 ANTTTGTEKEETTALLPLSKQRAEAVRQFLIKEGLKSSRLSSI-GMGSSKPVASLNDRDN 1324

Query: 328  NSANRRIDILV 338
               NRR++ ++
Sbjct: 1325 WWKNRRVEFIL 1335


>gi|258646396|ref|ZP_05733865.1| OmpA family protein [Dialister invisus DSM 15470]
 gi|260403798|gb|EEW97345.1| OmpA family protein [Dialister invisus DSM 15470]
          Length = 357

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 36/142 (25%), Gaps = 11/142 (7%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVL 259
           S L           V          +   D     + F   S  P  +    L    +  
Sbjct: 219 SALDNKGNKKEADTVTITPAEEETAVPENDYYFISIHFGNDSDTPRADQTANLDAFVKAA 278

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF--AH 317
             +     + G TD+         N  L++ R        +  GV    +    G     
Sbjct: 279 KETGHTFKLVGRTDS---NGSKEYNDDLAIRRVKKVADYAVAHGVDLSHLV---GMYKGE 332

Query: 318 HRLKIASDPMNSA--NRRIDIL 337
                 +D       NRR+DI 
Sbjct: 333 EAPVDTNDTEAGRANNRRVDIF 354


>gi|153833067|ref|ZP_01985734.1| outer membrane protein [Vibrio harveyi HY01]
 gi|148870635|gb|EDL69542.1| outer membrane protein [Vibrio harveyi HY01]
          Length = 204

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 7/173 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                   +    ++   LQD           L         +        + S      
Sbjct: 21  AEDEYEYTETPKAEQIADLQDDDNDGVINARDLCPGTPATSEIDNDGCGEYIKSSEKMEV 80

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S    P     ++++ E L       I ++G+         +  N  LS  RA
Sbjct: 81  RVLFANDSDEIDPVFRRQIRELSEFLKEYPSTSIELQGYASKV---GGSEHNLDLSKRRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
            +    L+  G+  DR+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 138 NNVRAALLGYGIESDRV-RIVGFGDTHLAEQGTDEVSHALNRRVTASVIGYKG 189


>gi|30314430|gb|AAP15424.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
          Length = 150

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|16127724|ref|NP_422288.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|221236545|ref|YP_002518982.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
 gi|13425220|gb|AAK25456.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|220965718|gb|ACL97074.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
          Length = 449

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWR 286
              +     F    S+  PE   V+ +  +         I + GHTD        + N +
Sbjct: 338 FEAREFIVYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDT---SGSPKYNAK 394

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LS  RA +    L+  GVS++ +  +         +A+        NRR  I +
Sbjct: 395 LSERRARAVADALVSQGVSQN-VLGVDWKGESAPAVATGDGVKEPLNRRSTISI 447


>gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
 gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
          Length = 329

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 16/117 (13%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +F    S    E +  +  + + +           ++G+TD          N  LS  RA
Sbjct: 211 LFPFDGSSLCEEGVKAVNDVVDSVNAKNIQNAAYDVKGYTDRI---GSEAYNQTLSEKRA 267

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------RRIDILVED 340
            +    L  +GV+ +++  ++G                N         RR+++ V  
Sbjct: 268 QAVADQLQAAGVAPEQL-TVTGMGEADPVSTGCEGLRGNKLVDCLAPDRRVELSVTG 323


>gi|163802040|ref|ZP_02195936.1| quinolinate synthetase [Vibrio sp. AND4]
 gi|159174181|gb|EDP58989.1| quinolinate synthetase [Vibrio sp. AND4]
          Length = 175

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S    +   +L      L+ +    ++I GH D          N  L   RA + 
Sbjct: 75  FAFDNSTIAGDYEEMLAAHASYLSKNPGLNVTIEGHADER---GTPEYNIALGERRAEAV 131

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
              L   GV  D++S +S +   +  +     +  + NRR  ++
Sbjct: 132 SNYLQALGVQADQVSIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174


>gi|325287507|ref|YP_004263297.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
 gi|324322961|gb|ADY30426.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
          Length = 393

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 15/211 (7%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +         +    K   +     + I KE+      ++  K    + +   + L K
Sbjct: 189 QHAVGVVYQFKAEKGLSKKGLEKQAQIEEILKEQQRVADSIAAAKKQEEEARLLAERLKK 248

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
           +  +     V                  I+     N   F  +SS     T   L  I E
Sbjct: 249 EQEALRLAEVEKEKAAAEKQRREDLQAKINSFGSIN---FALNSSYLDSRTKKTLNSIAE 305

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L  +    + +  +TD+       + N  LS  R   +   L+  GVS ++++  + F 
Sbjct: 306 LLQENPTVTVKLGAYTDSR---GTDKYNLWLSQRRMQRSLDFLVSKGVSSEKVNA-TAFG 361

Query: 317 HHRLKIA-------SDPMNSANRRIDILVED 340
              L          ++  +  NRRI+I V+ 
Sbjct: 362 EEELLNNCEDGVYCTEQEHKINRRIEITVDK 392


>gi|50235085|gb|AAT70745.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++   
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGGGVPDKDDTCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   Q+  C    T             D+            P  +            L
Sbjct: 171 EVAGPVQNNGCPWPDTDKDGVLDKDHACVDV---------AAPPENTGCPWPDTDNDGVL 221

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
               K             + +       +    +          F+ + +    E+   L
Sbjct: 222 DKDDKC-------PTCPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|50235087|gb|AAT70746.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + K       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|88861313|ref|ZP_01135944.1| outer membrane protein [Pseudoalteromonas tunicata D2]
 gi|88816692|gb|EAR26516.1| outer membrane protein [Pseudoalteromonas tunicata D2]
          Length = 178

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     FD  ++I   +   +LQ     L  +  V   I GH D          N  L  
Sbjct: 72  QEQVIYFDFDTAIVSSQYADLLQAHANFLVVNPSVKVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            R  +    L   GVS  ++  +  +   +  +   ++   + NRR  ++
Sbjct: 129 RRGDAVVTYLQSLGVSASQL-SVVSYGEEKPMVKSRNEEAFAKNRRAVLV 177


>gi|118474222|ref|YP_891707.1| chemotaxis protein MotB, putative [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413448|gb|ABK81868.1| chemotaxis protein MotB, putative [Campylobacter fetus subsp. fetus
           82-40]
          Length = 334

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 102/317 (32%), Gaps = 31/317 (9%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++  I A         +   N    +L    + +    +   +
Sbjct: 14  W-ISYADLMAGLLFVFVLL--IGAI-VVKYVLTQADLNALRIDLNKKVEALAFSSDELNK 69

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
             +   D        K+    +  + ++       +     +     +   +     + E
Sbjct: 70  KEKAIKDFIEKLQNAKD----RNLALSEINALFNEKLAELSIQLGDINSTLRVVNEENKE 125

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               +    +    +           +         K+R++DL       +S L    + 
Sbjct: 126 LSSIINLKDEQISDLKIALTQKESEYNSVLADLNSTKERIKDLGGIKLKVISDLK-QKLG 184

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHST 263
             +  +     + +      ++ +FD +S +        L++           + +  + 
Sbjct: 185 NSIRIDANSGSVSL-----PSSILFDTNSFMLKDSARFDLRRTLKAYFDVLLSDEIRPNI 239

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFAHHRLK 321
           + I I GHTD+         N  LS  RAY   + +     +E+  +    SG +   L 
Sbjct: 240 DRIVIEGHTDSD---GSYLYNLELSQKRAYEVMKFIYSFYKNEELGKYLIASGRSFSDLV 296

Query: 322 IAS--DPMNSANRRIDI 336
             +  +   ++ RRI+I
Sbjct: 297 YKNGVEDKEAS-RRIEI 312


>gi|146343730|ref|YP_001208778.1| hypothetical protein BRADO6977 [Bradyrhizobium sp. ORS278]
 gi|146196536|emb|CAL80563.1| conserved hypothetical protein; putative OmpA-like transmembrane
           domains [Bradyrhizobium sp. ORS278]
          Length = 213

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+    +++  +Q +G  L           + GHTDA         N  LS  RA 
Sbjct: 103 FDYNSANISQKSMASVQALGRALTSPDLKGSTFVLAGHTDA---AGADAYNQDLSERRAD 159

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           S  + L++  G++   +  + G+   +LK  S P+   NRR+ ++
Sbjct: 160 SIKRYLVEKFGIAGSDLVTV-GYGKSKLKDPSQPLAEVNRRVQVV 203


>gi|163800218|ref|ZP_02194119.1| hypothetical protein 1103602000595_AND4_06044 [Vibrio sp. AND4]
 gi|159175661|gb|EDP60455.1| hypothetical protein AND4_06044 [Vibrio sp. AND4]
          Length = 298

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 84/292 (28%), Gaps = 33/292 (11%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
               +      I +   P  +  +  ++    +++    +    +D  I +    +    
Sbjct: 34  FADVNVSKF-LISECLAPQREIHIAVAEHFDFDESVIREADAASLDAFIRDIQGLSGRIT 92

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +G T+ K              + + +E          +   +     D      K    
Sbjct: 93  IVGHTDFKG-------------SDEYNEKLSMRRAESVKAYLEQQLDLDQYDWEVKHFGE 139

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P +  E   A    +R   + ++          +            T           
Sbjct: 140 SQPLVLGESDQARAENRRAYAMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              FD  +S   PE +  L      L      I + GHTD          N +L+  RA 
Sbjct: 191 ---FDFDNSELKPEELSQLDDFIAKLQGLEGSIMVAGHTDQV---GALSYNEQLAERRAQ 244

Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           +    L K+ +   + + ++  F   +  I       N+ NRR  I+ ++ +
Sbjct: 245 NVVAYL-KTKLDPSQFAWEVKAFGELQPVINEVSPQANALNRRAFIVFKESE 295


>gi|311745705|ref|ZP_07719490.1| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
           PR1]
 gi|311302419|gb|EAZ79498.2| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
           PR1]
          Length = 426

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 8/229 (3%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
            G+   +      E +  +   + +    +   ++ +     L  S         ++   
Sbjct: 202 TGTLGLQFYLGSAEEHADWYIAADKYATKEELASQINGIKDMLKDSDGDGVPDYLDKEPN 261

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQR 232
            P  ++                  +     L G  + N             +  +I D  
Sbjct: 262 TPAGARVNSQGTTMDSDGDGTPDHMDECPFLPGPASTNGCPVEEVVEQVDFLQKAINDGY 321

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               +   S  PL  +      +   +  +    + ++G+ D          N +LS  R
Sbjct: 322 INVYYAFDSDKPLGYSTSAANYVANFMKKNPGVNVEVKGYADEL---GPEDYNMKLSERR 378

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVE 339
           A + Y +L+ SGV   R+    G+        +S       RR    V+
Sbjct: 379 AKAVYDLLIASGVDGSRL-SYKGYGEDTSVDKSSADARQMARRASFEVK 426


>gi|294787834|ref|ZP_06753078.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
 gi|294484127|gb|EFG31810.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
          Length = 229

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285
            +I  ++  +F    S    E +  L +    L  +  + + + GHTD   F      N 
Sbjct: 82  EVISFQSNFLFGFDKSTLRSEAVAKLNETAAKLRGTEVQSVRVEGHTD---FMGKDTYNQ 138

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            LS  RA      L   GV   +IS + G+   +
Sbjct: 139 ALSERRANVVANYLANQGVPAGKISAV-GYGESQ 171


>gi|88801593|ref|ZP_01117121.1| OmpA family protein [Polaribacter irgensii 23-P]
 gi|88782251|gb|EAR13428.1| OmpA family protein [Polaribacter irgensii 23-P]
          Length = 651

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARD 283
              +I + NT  FD +      E  + L KI  ++    ++I     HTDA   +     
Sbjct: 508 RNELIIKINTIYFDSNKWNIRSEAAIELDKIVSIMTKYPKIIVASASHTDA---KGNRAY 564

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDP----------MNSA 330
           N  LS  RA SA   ++  G+S +RI    GF    L    + +D            +  
Sbjct: 565 NKILSQRRAKSAVDYIIYKGISPERIY-GKGFGEDELTNKCVDNDAHSNRVKCSKLQHQE 623

Query: 331 NRRIDILVED 340
           NRR   LV +
Sbjct: 624 NRRTSFLVLN 633


>gi|115350730|ref|YP_772569.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115280718|gb|ABI86235.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 169

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + +   +   + NRR D++
Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166


>gi|114570410|ref|YP_757090.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114340872|gb|ABI66152.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 359

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287
            D      F+  SS    +   V+ +            +++ G TD       A  N  L
Sbjct: 248 DDVSFPVYFEWDSSTLTAQARAVIAQASNQRGSCGVTRVTVAGFTDR---SGAASYNVGL 304

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           S  RA    + L++ GV    I  +  F   R  +A+        NRR ++++
Sbjct: 305 SERRARVVREELVRLGVPASTI-SMEAFGETRNAVATADGVREPLNRRTEVVI 356


>gi|254443045|ref|ZP_05056521.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
 gi|198257353|gb|EDY81661.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
          Length = 512

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 11/118 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           +     F   ++   PE +  ++++ ++L +  +    + GHT A      A  N +LS 
Sbjct: 397 KLRPISFQSGTAGLSPEGVSSIEEMVDILQNYPDFRILVAGHTSAR---GDAEANRQLSE 453

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNS-ANR--RIDILVEDR 341
           +RA S  + L+    + EDR+  + G    +    +A +   +  NR  R++      
Sbjct: 454 ERARSVAKYLVDHYAIDEDRVRAV-GVGGEQPLRRLAGESYRAHQNRLSRVEFSFLRD 510


>gi|312149267|gb|ADQ29338.1| outer membrane protein [Borrelia burgdorferi N40]
          Length = 381

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380


>gi|262173379|ref|ZP_06041056.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           mimicus MB-451]
 gi|261890737|gb|EEY36724.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           mimicus MB-451]
          Length = 345

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268
               V  E       +   D+     F         E  + L+ +   +        + +
Sbjct: 194 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLV 253

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G+TD       +  N  +S  R+    + L + G++E+++ ++          ++D   
Sbjct: 254 DGYTDNV---GPSVANLTISRQRSELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAA 309

Query: 329 --SANRRIDILVEDRQ 342
             + NRR+ + +    
Sbjct: 310 GQAKNRRVTLRLVRDN 325


>gi|225549312|ref|ZP_03770285.1| outer membrane protein [Borrelia burgdorferi 94a]
 gi|225370170|gb|EEG99610.1| outer membrane protein [Borrelia burgdorferi 94a]
          Length = 389

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 253 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 307

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 308 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 363

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 364 SQKPKYPKSSPLKAKNRRVEITILN 388


>gi|223889267|ref|ZP_03623855.1| outer membrane protein [Borrelia burgdorferi 64b]
 gi|223885300|gb|EEF56402.1| outer membrane protein [Borrelia burgdorferi 64b]
          Length = 333

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 197 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 251

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 252 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 307

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 308 SQKPKYPKSSPLKAKNRRVEITILN 332


>gi|225552144|ref|ZP_03773084.1| outer membrane protein [Borrelia sp. SV1]
 gi|225371142|gb|EEH00572.1| outer membrane protein [Borrelia sp. SV1]
          Length = 381

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380


>gi|226320927|ref|ZP_03796478.1| outer membrane protein [Borrelia burgdorferi 29805]
 gi|226233699|gb|EEH32429.1| outer membrane protein [Borrelia burgdorferi 29805]
          Length = 381

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380


>gi|218249525|ref|YP_002374694.1| outer membrane protein [Borrelia burgdorferi ZS7]
 gi|221217420|ref|ZP_03588891.1| outer membrane protein [Borrelia burgdorferi 72a]
 gi|224533995|ref|ZP_03674579.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
 gi|225549874|ref|ZP_03770836.1| outer membrane protein [Borrelia burgdorferi 118a]
 gi|226321923|ref|ZP_03797448.1| outer membrane protein [Borrelia burgdorferi Bol26]
 gi|218164713|gb|ACK74774.1| outer membrane protein [Borrelia burgdorferi ZS7]
 gi|221192698|gb|EEE18914.1| outer membrane protein [Borrelia burgdorferi 72a]
 gi|224512831|gb|EEF83198.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
 gi|225369565|gb|EEG99016.1| outer membrane protein [Borrelia burgdorferi 118a]
 gi|226232513|gb|EEH31267.1| outer membrane protein [Borrelia burgdorferi Bol26]
          Length = 381

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380


>gi|15594512|ref|NP_212301.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
 gi|216264209|ref|ZP_03436201.1| outer membrane protein [Borrelia burgdorferi 156a]
 gi|2688065|gb|AAC66563.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
 gi|215980682|gb|EEC21489.1| outer membrane protein [Borrelia burgdorferi 156a]
          Length = 389

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 253 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 307

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 308 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 363

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 364 SQKPKYPKSSPLKAKNRRVEITILN 388


>gi|229525621|ref|ZP_04415026.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
           albensis VL426]
 gi|297578614|ref|ZP_06940542.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
 gi|229339202|gb|EEO04219.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
           albensis VL426]
 gi|297536208|gb|EFH75041.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
          Length = 294

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%)

Query: 51  MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++ I+        A+  +Y     ++    +     E                     K 
Sbjct: 9   LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           ++D ++         + +                + +  +  ++             +++
Sbjct: 69  NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E    P  S +   +  ++  +      +SS L     +     +      +   IS  
Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183

Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286
                  +D+  S      +   L +I E + ++ ++  +    +TD++   N +     
Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|50235089|gb|AAT70747.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 70/266 (26%), Gaps = 24/266 (9%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + K       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPKVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRI 334
             G           AS+     +R++
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKV 356


>gi|50235093|gb|AAT70749.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPETPGLPEFQGCPDTDGDGVPDKDDNCL 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       R+              F  + S   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPRSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GVS  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|260432019|ref|ZP_05785990.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415847|gb|EEX09106.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 518

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +   LA  I+S  S +    + + V      + + +S         F+  SS P  ++  
Sbjct: 372 QGDRLANAITSGGSEVGLQELQRMVETLRPLSRLSLSFR-------FEPGSSRPDAQSRS 424

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL---MKSGVSED 307
            +Q++ + L               S     A  N R++L RA +    +   +++ V + 
Sbjct: 425 NIQQLAQALEAGQYDGRKLVFVGFSDGDGPAESNARIALRRAQTVRNAVLAAVQTSVPDS 484

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
               + GF         D       NRR++I V 
Sbjct: 485 VGISVEGFGEAMPLACDDTDWGRKANRRVEIWVR 518


>gi|30314438|gb|AAP15428.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
 gi|30314440|gb|AAP15429.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
 gi|30314446|gb|AAP15432.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
          Length = 150

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|318068283|gb|ADV36929.1| outer membrane protein A [Riemerella anatipestifer]
          Length = 387

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKVKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  +V+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAADVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|319952777|ref|YP_004164044.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319421437|gb|ADV48546.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 301

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 41/141 (29%), Gaps = 9/141 (6%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS--SIPLPETIVVLQKIGEVLA 260
           L  +      +    E     +   I        F+               +  I + L 
Sbjct: 164 LGPVSYAFSNEHEDLEEEMKALYDKIKADPLVLYFNTGEAAITLTVSERQKIAAISKYLD 223

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                  S+ GHTD+         N  L  +RA  A Q L ++G+   +I   S      
Sbjct: 224 KIEGANCSVVGHTDSQ---GNRITNIGLGQERADFAKQYLSENGILASKIIATS-KGPDT 279

Query: 320 LKIASDPMNSA--NRRIDILV 338
               +D       NRR  I +
Sbjct: 280 PIATNDTDEGRSQNRRTVITL 300


>gi|167623666|ref|YP_001673960.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353688|gb|ABZ76301.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 245

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 20/179 (11%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           + +   L    +E I+  ++ + L +L+ +       L +  + +         G+ +  
Sbjct: 76  QTQQVMLDEKEQELIVLNQQNQSLVELSDQYEQAQQQLTSLKMAQEQKLTELALGLNVQ- 134

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
                   F   SS   P     L  I   ++ S E  + + G+ D          N  L
Sbjct: 135 --------FKTGSSTIEPHFQNQLNDIAYAMSLSPELTLDLTGYADRR---GDGDYNQAL 183

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVEDRQ 342
           S  R       L++ GV+E R+     +      +A       N    RR+ + +++++
Sbjct: 184 SEQRVAEVKNYLIEQGVAEARLHN-QAYGDSSPLMAEQSFE--NDFFDRRVTLKLQNQE 239


>gi|251733529|emb|CAR82514.1| pal [Ensifer adhaerens]
          Length = 87

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I+I GH D          N  L   RA S   
Sbjct: 1   TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLVSQGVPANRMKTIS-YGKEKPVA 81


>gi|251733523|emb|CAR82511.1| pal [Ensifer adhaerens]
 gi|251733525|emb|CAR82512.1| pal [Ensifer adhaerens]
 gi|251733527|emb|CAR82513.1| pal [Ensifer adhaerens]
          Length = 87

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I+I GH D          N  L   RA S   
Sbjct: 1   TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLISQGVPSNRMKTIS-YGKEKPVA 81


>gi|154148493|ref|YP_001406772.1| putative chemotaxis protein MotB [Campylobacter hominis ATCC
           BAA-381]
 gi|153804502|gb|ABS51509.1| putative chemotaxis protein MotB [Campylobacter hominis ATCC
           BAA-381]
          Length = 337

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 114/325 (35%), Gaps = 47/325 (14%)

Query: 33  WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
           W I YAD M  L+  F+++       + +  TD    +     F     +L  + K   +
Sbjct: 12  W-IAYADLMAGLLFVFVLLVGGIIVKYFLTQTDLQKTQQ---NFANVLSSLQDSKKKSAE 67

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
            +   +  +     L+++    +    +        ++  +   +  +  N   +++ + 
Sbjct: 68  LEALNKIFADKLDKLNVENEGLRKQNSIYFIQIEDLEEMAKKLKDENFDLNKTINKNVEI 127

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
               D++    L K T  E   NK  +      ++ + L   + K + D+ +K+ +++  
Sbjct: 128 ISENDTKIAFLLDKLTQKESDFNKILHDLNVTKNRIRNLTGMKVKVITDIREKLGNSVKI 187

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------I 255
                +                     ++ +FDK S     +    L++           
Sbjct: 188 DNNGALT------------------LSSSVLFDKGSWAIKDDIKNELKRSLQGYFNALLN 229

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKIS 313
            + +  + + I I GHTD+         N  LS +RA++    +      +   +    S
Sbjct: 230 NDEIRQNLDQIIIEGHTDSD---GDYIYNLALSQNRAFAVMDFINSWNKDDRLKKYIIAS 286

Query: 314 GFAHHRLKIAS--DPMNSANRRIDI 336
           G +     +    +  +++ RRI+I
Sbjct: 287 GKSFMSPVLRDGVEDKDAS-RRIEI 310


>gi|54309732|ref|YP_130752.1| putative sodium-type flagellar protein MotY [Photobacterium
           profundum SS9]
 gi|46914170|emb|CAG20950.1| Putative sodium-type flagellar protein MotY [Photobacterium
           profundum SS9]
          Length = 296

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +D  +      +   L +I + + +S ++  +   T +         N  LS  RA    
Sbjct: 190 YDMDNDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTNV-NQSLSERRAKKLE 248

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +  M  G+ ++RI ++  +   R    +D     + NRR+ I +
Sbjct: 249 EYFMSLGLPKNRI-QVEAYGKRRPIADNDTPIGRNKNRRVVISL 291


>gi|157148115|ref|YP_001455434.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
           BAA-895]
 gi|157085320|gb|ABV14998.1| hypothetical protein CKO_03925 [Citrobacter koseri ATCC BAA-895]
          Length = 160

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FDK+     PE+   ++++   LA +  +   + GHTD          N  LSL R
Sbjct: 52  DNILFDKNDYKLRPESQQQIREMASRLAATGLKHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A        + + +    ++   G        ++      + NRR+ +++
Sbjct: 109 ANVVADAWAEGANIPRSNLTT-QGLGKKHPVASNQSAKGRAENRRVAVVI 157


>gi|153003801|ref|YP_001378126.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027374|gb|ABS25142.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 171

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   +    P     ++++   L                  + GHTD+      
Sbjct: 53  RKNQCSFKTDTDELEPGCDAKMKRLANALVDAKKQLNGAGVQNFKFVVSGHTDS---SGS 109

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A+ N  LS  RA    + L+ +G+ +D I  + G    R  +   D     + NRR ++ 
Sbjct: 110 AKHNDALSAKRAAVVERELVANGIPKDEIQSV-GMGSKRPLVKPDDTPAKKAKNRRYELQ 168

Query: 338 VE 339
           V+
Sbjct: 169 VK 170


>gi|195941898|ref|ZP_03087280.1| outer membrane protein (tpn50) [Borrelia burgdorferi 80a]
          Length = 380

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 244 IETEVENYIREKKIKAIKVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 298

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 299 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 354

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 355 SQKPKYPKSSPLKAKNRRVEITILN 379


>gi|148547176|ref|YP_001267278.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148511234|gb|ABQ78094.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 435

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 69/224 (30%), Gaps = 14/224 (6%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
              R       L+    ++    +         +  +    +  +++   ++LP   K +
Sbjct: 217 GTDRQAIGFSSLAAVHGAKVLAVAEGDAPAMLPERARVASEDYPLSRRLYFYLPANPKPQ 276

Query: 183 ILAMKRKKRLQDLAKKISST---LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             A+    +       I+        + A ++            + +          F +
Sbjct: 277 AKALADFAQSPAGQAIIAQQGFVSQQIKALSVAPQSDMPPRYRILALQAQRLSVNFRFQE 336

Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            S+    + +  +Q++ E L           + G  D       A     LS  RA +  
Sbjct: 337 GSARLDNKALRDVQRVAEYLRQAGKLQGKAVLVGFGDPKETPGRAAL---LSRLRAQAVR 393

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           + L + GV    + +++G         ++       NRR+++ V
Sbjct: 394 RELARGGVE---VLQVTGMGDELPVAGNEQEQGRLRNRRVEVWV 434


>gi|330447679|ref|ZP_08311327.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491870|dbj|GAA05824.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 508

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           +    +F   S          L++  E L H  +    + GHT     R     N +LS 
Sbjct: 393 KTRPVIFSSGSDQLTANGKQQLRQTAESLTHYPKFRILVEGHT---GLRGDKALNEQLSA 449

Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI--ASDPMNS-ANR--RIDILVED 340
            RA +    L+ + G    RI  I G          + +     ANR  R++I +  
Sbjct: 450 QRAKAVKHYLVNELGFEARRIHAI-GKGSKEPLERLSGESQRRYANRLMRVEIALLS 505


>gi|83647595|ref|YP_436030.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83635638|gb|ABC31605.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 187

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
             G     +   E     +++            +   ++ L +  +           D +
Sbjct: 19  AAGCTSTDTRPDETVGVVDQDGADAGGVGLGNGSGLSEEELAEQQRLAEQNAMTAEQDAL 78

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RG 270
            +  +F                   FD   +I  PE+ + L+    +LA +  V  +  G
Sbjct: 79  REVRVFY------------------FDFDKTIVKPESHMSLRAHAALLAANPAVKVVLNG 120

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN 328
           + D          N  L   RA +  + L+ +G ++ +I  +S +          ++   
Sbjct: 121 YADER---GTKEYNLALGERRAQAIERFLVVNGANDSQIETVS-YGEEFPVDPAHNEAAW 176

Query: 329 SANRRIDI 336
           + NRR+ I
Sbjct: 177 NKNRRVVI 184


>gi|237798824|ref|ZP_04587285.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021677|gb|EGI01734.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 389

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 72/267 (26%), Gaps = 20/267 (7%)

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                G          ++                           +             N
Sbjct: 34  WQFGSGSESSDTGAAANAPAPSPAPAPAPAPVAKAAAAPAPAAGAESSAPWYWPFGSNDN 93

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKST--DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +Q       S   D      + KS             +    P +         +  L +
Sbjct: 94  AQAKPDAVASKPADKPAAPLIAKSETDSKWWWPFGSADKTDQPKALPTPDPKVTQAWLDE 153

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQ 253
              ++ + +              E     + I+         F+      L P T+  + 
Sbjct: 154 YEPRLRAAIKDSPFQ-------LERREDLLAIT---APVDSSFNPDRPAMLLPNTLGPIT 203

Query: 254 KIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++ +V+       + + GH D          N ++S +RA S   +   SG+  +R+  +
Sbjct: 204 RLAKVVEGDQKTAVLVLGHGDT---SGPTEANQKISQERAQSVAAIFRLSGLERNRL-SL 259

Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337
            G      + A+D     + NRR++IL
Sbjct: 260 RGMGAVMPRAANDSLQGRALNRRVEIL 286


>gi|126046392|gb|ABN73089.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNKERMKDRKVVV 358


>gi|312200527|ref|YP_004020588.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
 gi|311231863|gb|ADP84718.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
          Length = 188

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 12/107 (11%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD  S   +P+    ++KI   +      + I G TD          N  LS  RA + 
Sbjct: 91  LFDVGSDKLVPDAAAEIEKIVPAIQTHDGPVQILGFTDGV---GTDSYNQDLSQRRADAV 147

Query: 296 YQVLMKSGVSEDRISKISGFA-HHRLK-IASDPMNSANRR-IDILVE 339
             +L+ +GV    + +  G         +         RR ++I+++
Sbjct: 148 KAILVGAGVKAS-LLQAIGKGSDGAPAGVPDST-----RRKVEIVLK 188


>gi|262193343|ref|YP_003264552.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262076690|gb|ACY12659.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 254

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 13/106 (12%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             FD   +    +   VL +  E +  +     + + GHTD          N  LS  RA
Sbjct: 155 VYFDFDEAGIRDDAREVLTQAAECIRQAPADSGVYVEGHTD---GSGTEEYNVALSERRA 211

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
            +  + L + G+   R   +                    +RR++ 
Sbjct: 212 RTVTEFLERLGIDPGRF-SVIAKGEGVP-----SGEGTDKDRRVEF 251


>gi|157373221|ref|YP_001471821.1| hypothetical protein Ssed_0080 [Shewanella sediminis HAW-EB3]
 gi|157315595|gb|ABV34693.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 304

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 93/298 (31%), Gaps = 29/298 (9%)

Query: 45  MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104
           ++FFL++  I        +       P  +     +   F  Q   + +   +  L    
Sbjct: 12  LSFFLLISNIATASSTRYQ------TPLEQAKWDFTGNRFICQIEHKVNGFGEFKLIARP 65

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             + +        + ++   Q    +  +      S    +         K   ++   +
Sbjct: 66  GTSLSLQLDADWLSFEQTTSQAKVVSPSWSQTDSLSSGATH--------LKWHGRTAISD 117

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            + +K        L+ + ++  +     +     I++           + +L +      
Sbjct: 118 DTTSKFLEALEQGLAWQVLILARDGISYKVETSPINTQAIANKFKLCRQELLPKPFSYVR 177

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIAR 282
            + I        F+  +S       V L+ I + +    + + I +  H DA        
Sbjct: 178 RVDIQ-------FESGTSKLTAAHEVDLEAIAQYVQADATVKEILVDAHADA---SGEHL 227

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            N  LS +RA      L + G+ + +I ++         ++++       NRR+ I +
Sbjct: 228 ANLVLSKERADEVASRLFELGIQKQKI-QVRHHGARSPIVSNNSPEGREINRRVTIRL 284


>gi|57168163|ref|ZP_00367302.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228]
 gi|57020537|gb|EAL57206.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228]
          Length = 316

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 97/330 (29%), Gaps = 52/330 (15%)

Query: 24  DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83
            +       W I YAD M  L+  F+++                            +  +
Sbjct: 2   KNEQEEGNFW-IAYADLMAGLLFVFILLI--------------------------GAIVV 34

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEH 142
                  +           +  + ++  +L+       K    L N    L+    Q   
Sbjct: 35  KYVLTQSDLREIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKAE 94

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---I 199
            + ++T   +  K+L  S D +          L    +E     +   + ++  +    I
Sbjct: 95  LEANITNYEQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLI 154

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ------ 253
              LS  +   +   +  +     I +      +  +FDK S     E    L+      
Sbjct: 155 RENLSKELQAKLDSNITIDQKTGSISL-----PSEVLFDKDSYTLKNEAKASLRKILSEY 209

Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--D 307
                    +  + E I I GHTD+         N  LS  RAY     +          
Sbjct: 210 FNAIINDPKILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKDTRLQ 266

Query: 308 RISKISGFAHHRLKIASDPMN-SANRRIDI 336
           ++   SG +     + +   +   +RRI+I
Sbjct: 267 KLLMASGRSFSDPVLVNGVEDKDKSRRIEI 296


>gi|253990432|ref|YP_003041788.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781882|emb|CAQ85046.1| peptidoglycan-associated lipoprotein [Photorhabdus asymbiotica]
          Length = 175

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
             N   F         +   +L      L  +     +  GH D          N  L  
Sbjct: 69  NNNIVYFGFDKYDISSDFSQLLDAHAAFLRSNPSYKVVVEGHADER---GTPEYNIALGE 125

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RA +    L   GVS ++IS +S +   +  +        + NRR
Sbjct: 126 RRANAVKMYLQGKGVSGEQISIVS-YGKEKPAVLGHDEAAYAKNRR 170


>gi|226942084|ref|YP_002797158.1| Pal [Laribacter hongkongensis HLHK9]
 gi|226717011|gb|ACO76149.1| Pal [Laribacter hongkongensis HLHK9]
          Length = 169

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
            + +  FD  SS    E   V++   + L  +T     I+G+TDA         N  L  
Sbjct: 60  SKRSVYFDFDSSAVKGEYRPVVEAHAQYLKQNTARKAQIQGNTDAR---GSREYNLALGQ 116

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R+ S  Q +   GV E ++  +S F   + +         + NRR D++
Sbjct: 117 RRSESVKQAMRVLGVPEAQLEAVS-FGKEKPRATGTTAADYAENRRADVV 165


>gi|126665979|ref|ZP_01736959.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
 gi|126629301|gb|EAZ99918.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter sp. ELB17]
          Length = 305

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           Q +  +F  +S          L K+   +    +   + + GHTD         DN +L+
Sbjct: 182 QGSQILFSSASVALSDADRRSLDKVVVYVLADSTVTKVLVDGHTDRR---GSRIDNRKLA 238

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
            DRA +    L   GV E RI  +      +   + +P  + NRR+ I   +R+G
Sbjct: 239 QDRADAVAGYLKSQGVEESRI-TVRAHGD-QFAASGNP--AQNRRVVIR-MEREG 288


>gi|288919975|ref|ZP_06414296.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
 gi|288348628|gb|EFC82884.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
          Length = 212

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 55/206 (26%), Gaps = 12/206 (5%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            ++         +     L        S         P  +     A    + L    + 
Sbjct: 6   AADRGARRAVGPALAVCALACVLVGPGSPRALGATADPSAAGPTRSADVPDEHLTASVRG 65

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           + + +S L  D         T        ++      +F   S+         + K+   
Sbjct: 66  LDTAVSVLPIDLADAVSPLHTEERRDDQVVVTISADVLFAFDSADLTDVARAEITKLAPR 125

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +   TE +++ GHTD          N  LS  RA +   VL    +        +G    
Sbjct: 126 VRPGTETVTVLGHTDKL---GTPAYNVMLSQRRADAVAGVLRSL-LPAGTRVSATGRGGA 181

Query: 319 RLKIASD--------PMNSANRRIDI 336
                +            + NRR+ I
Sbjct: 182 DPVTPNSHPDGSDDPDGRALNRRVQI 207


>gi|257095753|ref|YP_003169394.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048277|gb|ACV37465.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 176

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            + +  FD  S     E   ++    + L  + +    I+G+TD          N  L  
Sbjct: 66  SKRSVYFDFDSYEVKSEYKDLVTAHAKFLTDNRQFKMLIQGNTDER---GSREYNLALGQ 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
            RA +  ++L   G  ED++  +S     + K     +   + NRR
Sbjct: 123 KRADAVRKMLTLLGAREDQLESVS-LGEEKPKNEGHDESAWAQNRR 167


>gi|302536573|ref|ZP_07288915.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
 gi|302445468|gb|EFL17284.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
          Length = 212

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 63/204 (30%), Gaps = 9/204 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
           +  +      +      G     + D + S+                 A   K       
Sbjct: 8   AAATAVAGLVIAGTHLLGATSAHADDPKPSVPPGTEPSAAAPVPIDSNAPGLKIPQGGTL 67

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             I       V +++      + T   +++++   ++  +F ++S++   +    +Q I 
Sbjct: 68  APIKVLDIAEVVEDLGGEQRRQETNQNVMMAL---QSEVLFPENSAVFNAQAASRIQAIA 124

Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + +       I + G TD             LS  RA +    L K+  +      + G+
Sbjct: 125 QEINTQKATRIRVFGFTDDQ---GSYEHGKELSKQRADAVQAELAKTVTNPAVTYDVRGY 181

Query: 316 AHHRLKIASDPMNSA--NRRIDIL 337
           +       +        NRR++I 
Sbjct: 182 SEDYPIADNSTEEGRKKNRRVEIT 205


>gi|90577378|ref|ZP_01233189.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           angustum S14]
 gi|90440464|gb|EAS65644.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           angustum S14]
          Length = 298

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284
             D R+  + F     +       +L  +   L H   V  +   GHTD          N
Sbjct: 175 YRDARDVVLQFQLGQRVVSSSQKQILADLASYLKHDKNVKRVLIDGHTDNV---GSNVAN 231

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++S  RA     +L ++GV    + ++           ++     + NRR+ I
Sbjct: 232 LQISKIRADDVASILRENGVRSS-LIEVRSHGSRYPVANNNTQHGKAKNRRVTI 284


>gi|332754029|gb|EGJ84401.1| ompA family protein [Shigella flexneri K-671]
 gi|333015875|gb|EGK35211.1| ompA family protein [Shigella flexneri K-304]
          Length = 127

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A          G          G        ++      + NRR+ +++
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVI 124


>gi|284042425|ref|YP_003392765.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
 gi|283946646|gb|ADB49390.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
          Length = 716

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 8/109 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +   F       L +     + I   L     V    GHTD+         N  L L R
Sbjct: 611 PSDGQFRVGDDTLLAQGRRYARAIAPQLKGVKRVTC-TGHTDSD---GGVVANRALGLAR 666

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +    L + GV      +       R +  +D       NRR+++ +
Sbjct: 667 AKAVCAELRRLGVKAP--LRTRSAGESRPRATNDTAQGRRLNRRVELTL 713


>gi|78062395|ref|YP_372303.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77970280|gb|ABB11659.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 163

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   +LQ   + L       + I+G+TD       +  N  L   R+ + 
Sbjct: 62  FDFDQYSVKPEYQSLLQAHADYLRSHPSRHVLIQGNTDER---GTSEYNLALGQRRSQAV 118

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
              L   GV   ++  +S     +       +   + NRR D++
Sbjct: 119 MSGLETLGVPATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161


>gi|269104725|ref|ZP_06157421.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161365|gb|EEZ39862.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 188

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 9/171 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            +S ++     + K L+D             AD  +  V+        + +        +
Sbjct: 9   SISAQQPPVATQTKDLRDFDSDGVINARDKCADTPLGAVVDNDGCPTYVKTDEKNSVHVL 68

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S++     +  L+K  + L    E  I ++G+         +  N  LS  RA + 
Sbjct: 69  FANDSTVIPETYMAQLKKTAQFLETFPETHIELKGYASPV---GNSAHNQYLSDTRAANV 125

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343
            Q L+  GV+ DRI  + GF        ++   ++N   RR+   V   +G
Sbjct: 126 RQQLIDFGVAADRIKTV-GFGDADPI-QAETSEASNTLSRRVVAQVVGSKG 174


>gi|158318969|ref|YP_001511477.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
 gi|158114374|gb|ABW16571.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
          Length = 200

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 57/197 (28%), Gaps = 18/197 (9%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               +    +  L      E    L   S     A    + +    + + +  S L  D 
Sbjct: 6   GRAARLALVTAALWVLAGAESPGALGATSAPPPPADVPAEEITRSVRPLDAAGSVLTIDP 65

Query: 211 IV---KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
                  V  E +   + ++I       +F   S          +  +   +  +T  ++
Sbjct: 66  ADSVLPLVTEERSGDRVTVTISAD---VLFAFDSDDLTEAARTEIATLAGRVGPATRTVT 122

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--- 324
           + GHTD+         N  LS  RA +   +L +  V        +G         +   
Sbjct: 123 VLGHTDSL---GTPAYNVILSQRRANAVADLL-RPAVPSGTRVSATGRGGADPVAPNTRP 178

Query: 325 -----DPMNSANRRIDI 336
                    + NRR+ I
Sbjct: 179 DGSDDAAGRALNRRVQI 195


>gi|147674163|ref|YP_001216480.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
 gi|229529898|ref|ZP_04419288.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
           12129(1)]
 gi|146316046|gb|ABQ20585.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
 gi|227012825|gb|ACP09035.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
 gi|229333672|gb|EEN99158.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
           12129(1)]
          Length = 294

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%)

Query: 51  MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++ I+        A+  +Y     ++    +     E                     K 
Sbjct: 9   LFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           ++D ++         + +                + +  +  ++             +++
Sbjct: 69  NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E    P  S +   +  ++  +      +SS L     +     +      +   IS  
Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183

Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286
                  +D+  S      +   L +I E + ++ ++  +    +TD++   N +     
Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|170701074|ref|ZP_02892051.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           IOP40-10]
 gi|172059753|ref|YP_001807405.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           MC40-6]
 gi|170134014|gb|EDT02365.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           IOP40-10]
 gi|171992270|gb|ACB63189.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           MC40-6]
          Length = 169

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + +   +   + NRR D++
Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166


>gi|83816525|ref|YP_446790.1| OmpA family protein [Salinibacter ruber DSM 13855]
 gi|83757919|gb|ABC46032.1| OmpA family protein [Salinibacter ruber DSM 13855]
          Length = 227

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 45/182 (24%), Gaps = 9/182 (4%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
              +    S        + EN  L    +    +++ +  L          +     + +
Sbjct: 21  APTRLPGASASSRLDSLRAENATLRSRLRRVEDSLRFRDDLATGQYYRDLRVLTDRLNRL 80

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIR 269
              V         +  +       +F+  ++         L+     L  +       + 
Sbjct: 81  AYEVQMRRQGGRAVRVLPAD---SLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVE 137

Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           GH D +P           NW LS  RA +  + L               +       ++ 
Sbjct: 138 GHADDTPLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNA 197

Query: 326 PM 327
             
Sbjct: 198 TA 199


>gi|59801906|ref|YP_208618.1| Omp3 [Neisseria gonorrhoeae FA 1090]
 gi|194099400|ref|YP_002002501.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
 gi|239999644|ref|ZP_04719568.1| Omp3 [Neisseria gonorrhoeae 35/02]
 gi|240014818|ref|ZP_04721731.1| Omp3 [Neisseria gonorrhoeae DGI18]
 gi|240017267|ref|ZP_04723807.1| Omp3 [Neisseria gonorrhoeae FA6140]
 gi|240081094|ref|ZP_04725637.1| Omp3 [Neisseria gonorrhoeae FA19]
 gi|240113304|ref|ZP_04727794.1| Omp3 [Neisseria gonorrhoeae MS11]
 gi|240116345|ref|ZP_04730407.1| Omp3 [Neisseria gonorrhoeae PID18]
 gi|240118630|ref|ZP_04732692.1| Omp3 [Neisseria gonorrhoeae PID1]
 gi|240121340|ref|ZP_04734302.1| Omp3 [Neisseria gonorrhoeae PID24-1]
 gi|240124175|ref|ZP_04737131.1| Omp3 [Neisseria gonorrhoeae PID332]
 gi|240126207|ref|ZP_04739093.1| Omp3 [Neisseria gonorrhoeae SK-92-679]
 gi|240128845|ref|ZP_04741506.1| Omp3 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494359|ref|ZP_05107530.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
 gi|260439836|ref|ZP_05793652.1| Omp3 [Neisseria gonorrhoeae DGI2]
 gi|268595455|ref|ZP_06129622.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
 gi|268597207|ref|ZP_06131374.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
 gi|268599383|ref|ZP_06133550.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
 gi|268602011|ref|ZP_06136178.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
 gi|268604343|ref|ZP_06138510.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
 gi|268682799|ref|ZP_06149661.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
 gi|268684790|ref|ZP_06151652.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
 gi|268687227|ref|ZP_06154089.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
 gi|291043111|ref|ZP_06568834.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
 gi|293398450|ref|ZP_06642628.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
 gi|129131|sp|P07050|OMP3_NEIGO RecName: Full=Outer membrane protein P.III; AltName:
           Full=Gonococcal protein III; Short=PIII; Flags:
           Precursor
 gi|44890|emb|CAA28752.1| unnamed protein product [Neisseria gonorrhoeae]
 gi|59718801|gb|AAW90206.1| outer membrane protein PIII [Neisseria gonorrhoeae FA 1090]
 gi|193934690|gb|ACF30514.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
 gi|226513399|gb|EEH62744.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
 gi|268548844|gb|EEZ44262.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
 gi|268550995|gb|EEZ46014.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
 gi|268583514|gb|EEZ48190.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
 gi|268586142|gb|EEZ50818.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
 gi|268588474|gb|EEZ53150.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
 gi|268623083|gb|EEZ55483.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
 gi|268625074|gb|EEZ57474.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
 gi|268627511|gb|EEZ59911.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
 gi|291012717|gb|EFE04700.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
 gi|291610921|gb|EFF40018.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
 gi|317164900|gb|ADV08441.1| Omp3 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 236

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264
            V +     V         +   I      +F         E    L+ + + L   + +
Sbjct: 68  AVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQ 127

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            + + GHTD   F    + N  LS  RAY     L+ +GV   RIS + G    +
Sbjct: 128 SVRVEGHTD---FMGSEKYNQALSERRAYVVANNLVSNGVPASRISAV-GLGESQ 178


>gi|330448674|ref|ZP_08312322.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492865|dbj|GAA06819.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 180

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 7/121 (5%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283
            + I    +   F    S   P  +  L     VL  +      + G TD          
Sbjct: 38  QVVIDAWPSVVNFGFDKSELTPAEMSRLANAVNVLQQNPSFKVAVVGSTDPE---GSEEY 94

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
           N  LS+ RA      L   G+S  R++ I G     L I +D    N ANRR  +++ D 
Sbjct: 95  NDALSMRRAQVVGDYLQSQGISSSRMTLI-GTGERELFIHTDSRSDNRANRRTQLILLDA 153

Query: 342 Q 342
            
Sbjct: 154 N 154


>gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida]
          Length = 359

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 216 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 275

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 276 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 331

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +R ++I V+  +
Sbjct: 332 CDSVKGRKALIACLADDRPVEIAVKGNK 359


>gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida]
 gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida]
 gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida]
          Length = 358

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++       +   F    +   P    VL  I   +A      
Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L+  GV+++ IS  +G         + 
Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +R ++I V+  +
Sbjct: 331 CDSVKGRKALIACLADDRPVEIAVKGNK 358


>gi|270339898|ref|ZP_06203472.1| OmpA family protein [Prevotella bergensis DSM 17361]
 gi|270333364|gb|EFA44150.1| OmpA family protein [Prevotella bergensis DSM 17361]
          Length = 694

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 35/180 (19%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L      ++         N  +            IS+    +   +D   +     + V 
Sbjct: 483 LAACQGYLNHQEEVRALVNPKESRDTTLQFALANISVPTLIDNIFYDFDKATLRDTSKVA 542

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L ++  +L  +  +   +  H D   ++  +  N RLS  RA S    L+  G++ DR++
Sbjct: 543 LDRLVTMLNENPNITIELSAHAD---YKGASTYNKRLSQRRAESVVNYLIAHGIAADRLT 599

Query: 311 KISGFAHHRLKIAS------------------------------DPMNSANRRIDILVED 340
            + G+   + K  +                              +  N  NRR + LV  
Sbjct: 600 PM-GYGKEKPKTVNRKVAEKYNWLKAGDVLSEEFIKAMKDEKKQEICNQLNRRTEFLVLR 658


>gi|209547147|ref|YP_002279065.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538391|gb|ACI58325.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 189

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+ +S+   PE+   +  I + L H         I GH+ ++     A+ N  LS  RA 
Sbjct: 83  FENNSTAIEPESYRTVGLIADALHHPDLFRYKFLIVGHSSST---GSAKHNLELSQKRAD 139

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L     VS DR+  + G           P ++ NRR+ ++
Sbjct: 140 AINEALSTTFAVSPDRLFSV-GAGEEWPINPGHPESADNRRVQLI 183


>gi|320540573|ref|ZP_08040223.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
           str. Tucson]
 gi|320029504|gb|EFW11533.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
           str. Tucson]
          Length = 382

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 28/129 (21%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S    E    L+++   L+        + + G+TDA       + N +LS
Sbjct: 252 KSDVLFNFNKSTLKAECQQSLEQLYTQLSSMDPKDGSVIVLGYTDAV---GSEQYNHKLS 308

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------------SAN 331
             RA S    L+  G+  D+IS   G      K  S   N                 + +
Sbjct: 309 EKRAQSVVDFLISKGIPSDKISA-RGLG----KADSTTGNTCGYKSGRATKAQIDCLAPD 363

Query: 332 RRIDILVED 340
           RR++I V+ 
Sbjct: 364 RRVEIEVKG 372


>gi|294508723|ref|YP_003572782.1| chemotaxis MotB protein [Salinibacter ruber M8]
 gi|294345052|emb|CBH25830.1| chemotaxis MotB protein [Salinibacter ruber M8]
          Length = 227

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 45/182 (24%), Gaps = 9/182 (4%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
              +    S        + EN  L    +    +++ +  L          +     + +
Sbjct: 21  APTRLPGASAPSRLDSLRAENATLRSRLRSVEDSLRFRDDLATGQYYRDLRVLTDRLNRL 80

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIR 269
              V         +  +       +F+  ++         L+     L  +       + 
Sbjct: 81  AYEVQMRRQGGRAVRVLPAD---SLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVE 137

Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           GH D +P           NW LS  RA +  + L               +       ++ 
Sbjct: 138 GHADDTPLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNA 197

Query: 326 PM 327
             
Sbjct: 198 TA 199


>gi|332519438|ref|ZP_08395905.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045286|gb|EGI81479.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 289

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD             L      L       +SI G TD          N  LS +R
Sbjct: 23  HDVYFDTDEYNVPLTEENRLLLFISSLDSININKVSIYGFTDDR---GTNEYNLELSQNR 79

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM----NSANRRIDILVED 340
           A +  ++    GV  + I+ ++G     LK+ ++         NR+++I+V +
Sbjct: 80  ANTIKELFSGYGVDPNLITNVNGKGEILLKVLNEEEVHQIRGLNRKVEIIVNE 132



 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----W 285
           + +   F  S S    ++   L+K+ ++L        +I+GH   +     A D      
Sbjct: 174 RLDKIYFKTSYSYVTSDSKKTLEKLAKILVEKDNLYFTIQGHVCCTQNSRDAVDKKTKKR 233

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            LS+ RA   Y  L + GV + R+  + G          DP     RR++ILV 
Sbjct: 234 NLSVSRAKYIYDYLARKGVDKRRMKYV-GMRRKFPL-GGDPKYD--RRVEILVT 283


>gi|158337857|ref|YP_001519033.1| outer membrane protein A [Acaryochloris marina MBIC11017]
 gi|158308098|gb|ABW29715.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017]
          Length = 513

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 72/241 (29%), Gaps = 8/241 (3%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           +++        ST       +  +    L + Q       +   ++              
Sbjct: 278 LSQQIGKDGNLSTQDATSVSKGIDFFTALESHQWMNAGTLAKRIEATSAVLSLTGETAGL 337

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             N    Y    +++    + +    +     +++  L G  +      V  +  ++   
Sbjct: 338 VQNPRALYTQDFIAQAVTNSEQLVASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQ 397

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIAR 282
           +     R    F   S++   ++   L+ + + +          ++ GHT  +     A 
Sbjct: 398 VGNFKVRGEVKFATGSAVLSGDSQSTLKALAQEINEFNPSTIAVNVVGHTSKT---GSAA 454

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            N  LS  RA      L   GV  + +++  GF+     +          R +I +    
Sbjct: 455 TNQTLSQQRAQVVANFLRSQGVRPNLVAEGKGFSAQLPGVDPASPAQQ--RTEIQLRRVG 512

Query: 343 G 343
           G
Sbjct: 513 G 513


>gi|254509401|ref|ZP_05121484.1| sodium-type flagellar protein MotY  (Polar flagellum motorprotein)
           [Vibrio parahaemolyticus 16]
 gi|219547675|gb|EED24717.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein)
           [Vibrio parahaemolyticus 16]
          Length = 168

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           +D++S     ++   L +I E + H+ ++  +    +TDA   ++ +     LS  RA  
Sbjct: 62  YDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDSKSAS---QNLSERRAEV 118

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
                   G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 119 LQDYFKSLGLPEDRI-RVQGYGKRRPVDDNASPIGKDRNRRVVISLGRTQ 167


>gi|298209291|ref|YP_003717470.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
 gi|83849218|gb|EAP87087.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
          Length = 665

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 19/154 (12%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQ 253
              L     ++ +  +     +  +   + D     +      FD       P+  V L 
Sbjct: 510 DEKLFTTPTESQMVELDLMLEKEIVKAEVGDDIGKLLKLEPIYFDFDKHNIRPDAAVELA 569

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           K+  V+    E+   +R HTD+         N RLS  R  S    +++  G+S DR+  
Sbjct: 570 KVIAVMNEYPEMKIDVRSHTDSR---GKDDYNMRLSERRNKSTINYIVERGGISRDRL-T 625

Query: 312 ISGFAHHRLKIA-------SDPMNSANRRIDILV 338
             G+    L          S   +  NRR +  +
Sbjct: 626 GRGYGESELINECANGIPCSREKHELNRRSEFRI 659


>gi|332664693|ref|YP_004447481.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333507|gb|AEE50608.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 662

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 11/90 (12%)

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +L + T  + +  HTD+         N +LS+ RA +A + L++ GV+ +RI + +GF  
Sbjct: 563 MLKYPTMEVELGAHTDSR---GTTEYNQQLSVRRAEAAKEFLVRKGVAANRI-RTTGFGE 618

Query: 318 HR-------LKIASDPMNSANRRIDILVED 340
            +           ++  +  NRR ++ V  
Sbjct: 619 TQIRNHCKEGIECAEKEHQFNRRTEVKVLK 648


>gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 339

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   S   P     L      +A+    T  I + G+TD          N +LS 
Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RA +    L+  G +   ++ + G+      
Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPV 332


>gi|114327495|ref|YP_744652.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
 gi|114315669|gb|ABI61729.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
          Length = 149

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     F   +S P  +++ +L+          +    + G+TD       A+DN  LS 
Sbjct: 46  QNYFIFFAPDASQPKTDSLPILKVAVTYAKDHPDQNIIVVGYTDPV---GSAKDNHDLSE 102

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +RA +  + L+K+G+ + RI+   G    +     +  N  +RR++I
Sbjct: 103 ERADTIRKDLIKAGIPQARITA-RGHGQTQP----EWNNQESRRVEI 144


>gi|84500462|ref|ZP_00998711.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
 gi|84391415|gb|EAQ03747.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
          Length = 309

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 14/143 (9%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HS 262
           +    +   + +    T   +++  +D      F   ++         L ++   +    
Sbjct: 177 APEEPEADAELIDVLRTAGHVVLDDLD------FQSGAAALADREYTSLAELAVYIKGDP 230

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLK 321
             ++++ GHTDA         N  LS  RA +  Q L+ + GV+  ++S   G       
Sbjct: 231 ARIVALVGHTDAV---GAHDANVALSRRRAEAVRQRLIDRHGVAGSQVSA-RGAGFLAPV 286

Query: 322 IASDPM--NSANRRIDILVEDRQ 342
            ++        NRR++ ++   +
Sbjct: 287 ASNLTALGRERNRRVEAVLLAAE 309


>gi|114562634|ref|YP_750147.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114333927|gb|ABI71309.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 289

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           + +        +   LQKI   L+   EV  + I  +TD+         N ++S  RA S
Sbjct: 184 YQEGGVELTRFSSQQLQKIQRYLSFDPEVELVLIDAYTDSY---GGRSVNQKVSDKRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341
              +L+ SG+ +DRI   SG    R    +D       NRR+ I +   
Sbjct: 241 VKDILIASGIPKDRIHT-SGHGEKRHVTGNDLAEERKMNRRVVIKITKP 288


>gi|257464737|ref|ZP_05629108.1| lipoprotein Plp4 [Actinobacillus minor 202]
 gi|257450397|gb|EEV24440.1| lipoprotein Plp4 [Actinobacillus minor 202]
          Length = 282

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 19/125 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  + + + G+TD          N  LS  R
Sbjct: 141 GDFLFDFDKDTLTTKGKEVVDNVAAQLKSSKAQQVKVAGYTDRL---GSVNYNLDLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI-----LV 338
           A      L++ GV+  +I  + G+       A D  +          NRR+++     ++
Sbjct: 198 ANMVKARLVQQGVTA-QIEAV-GYGKANQVKACDGESGQALRDCLRPNRRVEVSANGGVL 255

Query: 339 EDRQG 343
           +  +G
Sbjct: 256 KQSEG 260


>gi|254490152|ref|ZP_05103343.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
           thiooxidans DMS010]
 gi|224464638|gb|EEF80896.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
           thiooxydans DMS010]
          Length = 188

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F+  S+    E    LQ     LA      + + GHTD          N  L  
Sbjct: 79  SNRVVYFEYDSATVRVEDQETLQAHAAYLAKKPNLTLRLEGHTDER---GAREYNLALGE 135

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            RA S  Q+LM  G S ++  +++ F   R           S NRR++++
Sbjct: 136 RRALSIRQILMLQGASINQF-QVTSFGEERPAEEGSSEYAWSQNRRVELV 184


>gi|126046408|gb|ABN73092.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIGSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|332664418|ref|YP_004447206.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333232|gb|AEE50333.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 289

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 236 MFDKSSSIPLP--ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
            F        P    +     + + LA       SI GHTD++     A++N +L L+RA
Sbjct: 185 SFAPDGVEFRPILPLVQYADSVRQYLALHKNKKLSIIGHTDST---GDAKNNLKLGLERA 241

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            +  +   + G+   +++  S          +        NRRI+ ++E
Sbjct: 242 QNTMRYFRELGIPPSQMAAYS-EGSKHPVSDNSTEVGKRRNRRINFIIE 289



 Score = 43.0 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           TD     +   +N  LS  RA +  +++++ G+S  R++
Sbjct: 105 TDEETAASGFFENLGLS--RADAVRKLMIQRGISPGRVT 141


>gi|107021874|ref|YP_620201.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116688822|ref|YP_834445.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
 gi|170732121|ref|YP_001764068.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
           MC0-3]
 gi|206561548|ref|YP_002232313.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
 gi|105892063|gb|ABF75228.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
 gi|116646911|gb|ABK07552.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
 gi|169815363|gb|ACA89946.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
           MC0-3]
 gi|198037590|emb|CAR53528.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
          Length = 170

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 68  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 167


>gi|330966520|gb|EGH66780.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 320

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 11/212 (5%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             ++   S  +   K          K    +   +   + +  +      K+        
Sbjct: 19  PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGKKDEPKALPM 78

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
             L+     +      L A         E     + I+         F+      L P T
Sbjct: 79  PDLKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135

Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +
Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           R+S+  G      + A+D     + NRR++IL
Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223


>gi|282881633|ref|ZP_06290296.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304392|gb|EFA96489.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 717

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             L  + + +   +        I++    +   +D   +    E+   L  + ++L  ++
Sbjct: 518 EELQVEPVKESKEYTLQFPLASITVPVLIDNIFYDFDKATLRLESKKALDDLVKLLNENS 577

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
              I +  H D   ++     N RL+  RA +  + L+  G+++DR+  + G+   + K
Sbjct: 578 HVTIELSAHCD---YKGSKEYNQRLAQRRAEAVVRYLIDKGIAKDRLKPV-GYGKEKPK 632


>gi|254476085|ref|ZP_05089471.1| OmpA family protein [Ruegeria sp. R11]
 gi|214030328|gb|EEB71163.1| OmpA family protein [Ruegeria sp. R11]
          Length = 196

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWR 286
           +Q     F  +S+   PE    L ++  VL+        + + GHTD+       + N R
Sbjct: 79  EQGYFIRFPFNSNALTPEYEAHLARLAAVLSSAQLQNSCVKLVGHTDSI---GSDQFNMR 135

Query: 287 LSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           LS  RA      L ++ GV+ +RI   S      L       +  NRR++IL
Sbjct: 136 LSKTRAQRVAAYLALEGGVAMERIQTAS-LGEKHLIKGLPGPHPLNRRVEIL 186


>gi|109899245|ref|YP_662500.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109701526|gb|ABG41446.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 186

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 8/160 (5%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P  +E      R    Q  A + ++  + + A N+   +  E        ++++ +    
Sbjct: 26  PSEEELAAESNRVAAAQAEADRKAAEEAKVQAGNMKPMLSPEEVMQKEKSALMEDQ-VVY 84

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    +   +L +    L  +     +  GH D          N  L   RA S 
Sbjct: 85  FDFDRSSVSSKYYSLLDQHAAFLVKNPGQAVVIEGHCDNR---GTPEYNIALGERRAKSV 141

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
              LM +GVS  ++S +S +   +    S      + NRR
Sbjct: 142 ETYLMNAGVSASQVSVVS-YGEEKPVDTSGTAAAFAENRR 180


>gi|222823912|ref|YP_002575486.1| chemotaxis protein MotB, [Campylobacter lari RM2100]
 gi|222539134|gb|ACM64235.1| chemotaxis protein MotB, putative [Campylobacter lari RM2100]
          Length = 316

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 104/320 (32%), Gaps = 53/320 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+++                            +  +       + 
Sbjct: 14  W-IAYADLMAGLLFIFILLI--------------------------GAIVVKYVLTQSDL 46

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS--LTRD 150
               +     +E + +N  +L       K   Q+L N    L +  + +    +     +
Sbjct: 47  QIIKENLQKQEERLRENKEELNQKEDILKNLSQKLNNTSSTLDDVNKQKQALEANITKLN 106

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +    L +      ++ +  N     + + +    + K ++++L     +T+  L A  
Sbjct: 107 QDLNSSLDEKDQQIFALLERLNKKDEEIKELESNFEEAKSKIKELGLIKENTIKNLQAKF 166

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEVLA 260
                L   T   +L       +  +FD +S     +    L+             E + 
Sbjct: 167 DTNITLDSNTGAIVL------PSEVLFDTNSFTLKAQAKENLKTILTQYFDNILKDENIL 220

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKISGFAHH 318
           +S E I I GHTD+         N  LS  RAY+    +          ++   SG ++ 
Sbjct: 221 NSIENIVIEGHTDS---AGSYIYNLDLSQKRAYAVMSFIHSFYKDPRLQKLLMASGRSYS 277

Query: 319 RLKIAS--DPMNSANRRIDI 336
            +      +   ++ RRI+I
Sbjct: 278 DVITKDGKEDKEAS-RRIEI 296


>gi|295690965|ref|YP_003594658.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295432868|gb|ADG12040.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 386

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 7/114 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
              +     F     +  PE   V+Q+  +         I + GHTD          N R
Sbjct: 275 YESREFVVYFPFDQYVLTPEAQAVVQQAADYAKGGGATKIVVTGHTDT---SGSDAYNRR 331

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LS  RA +    L+  GV+   +  +         +A+        NRR  + +
Sbjct: 332 LSERRAKAVADGLVGMGVNATAL-AVDWKGESAPAVATGDGVKEPLNRRSTVSI 384


>gi|85708815|ref|ZP_01039881.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
 gi|85690349|gb|EAQ30352.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
          Length = 378

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S    E   +L       ++     + + GHTD          N  L+  
Sbjct: 267 PYIVFFDFDESAITSEAATILDNAVTAYSNCGSARVMLAGHTDTV---GSQSYNLDLAAR 323

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           R  S  Q L   GV+   +     F    L++ +        NRR++I 
Sbjct: 324 RNASVQQYLTGRGVARS-MIASEAFGESDLRVPTADGVRELQNRRVEIT 371


>gi|254246221|ref|ZP_04939542.1| OmpA/MotB [Burkholderia cenocepacia PC184]
 gi|124870997|gb|EAY62713.1| OmpA/MotB [Burkholderia cenocepacia PC184]
          Length = 183

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 81  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 137

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 138 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 180


>gi|288918113|ref|ZP_06412470.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
 gi|288350495|gb|EFC84715.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
          Length = 186

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 6/104 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD  S +  PE    L  I   +      + + G++D          N  LS +RA + 
Sbjct: 89  LFDADSDVLRPEAATALAGIVPQIREHDGKVQVVGYSDGL---GSTEHNLELSRERAVAV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              L    +    + ++           +    S  RR++I++ 
Sbjct: 146 QTYLTSQDIPAA-MLEVVAKGEAG-AADNVADASR-RRVEIVLR 186


>gi|254506228|ref|ZP_05118371.1| outer membrane protein [Vibrio parahaemolyticus 16]
 gi|219550708|gb|EED27690.1| outer membrane protein [Vibrio parahaemolyticus 16]
          Length = 203

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S +  P  +  ++++ + L         ++G+            N  LS  RA
Sbjct: 81  HILFANDSDVVQPIFMTQIRELADFLEEYPSTTVELQGYASKV---GRPDYNLELSKRRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
            +   +L+   +  DR+  I GF    L +    +  ++ NR++   V   +G
Sbjct: 138 EAVENLLLDYQLDADRV-TIVGFGDTNLSVEGDDEQAHAQNRKVVASVIGHKG 189


>gi|197103803|ref|YP_002129180.1| OmpA family protein [Phenylobacterium zucineum HLK1]
 gi|196477223|gb|ACG76751.1| OmpA family protein [Phenylobacterium zucineum HLK1]
          Length = 410

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           ++    F     +  PE   V+ +        +   + + GH D          N RLS 
Sbjct: 302 KQFIVYFPFDQYVLTPEAQQVVTEAANYAKGGNATRVVVVGHADT---SGSQAYNVRLSE 358

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336
            RA +    L+ SGV++  +  +         +A+        NRR  IDI
Sbjct: 359 RRAKAVADALVGSGVNQTSL-SVDWKGETMPAVATGDGVKEPLNRRSTIDI 408


>gi|315127225|ref|YP_004069228.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
           sp. SM9913]
 gi|315015739|gb|ADT69077.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
           sp. SM9913]
          Length = 292

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q+ A KI+  +S +           +     +  +  D   T M ++ +SS     +
Sbjct: 141 QDWQNSADKIAVGMSNVNFKQ-AYWAFLQCRDELLPYNFEDISFTIMNYESNSSKLTKSS 199

Query: 249 IVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L KI E L +    E ISI  +TD+        +N  LS  RA      ++  GV E
Sbjct: 200 QQRLDKIAEYLKNDPSIESISIASYTDSY---GGRWNNLDLSRKRAKEIKDYMVGLGVDE 256

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            ++    GF   R    +D       NRR+ I +
Sbjct: 257 AKVVT-EGFGEKRFVDTNDNILGRDKNRRLVIQI 289


>gi|146338950|ref|YP_001203998.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
 gi|146191756|emb|CAL75761.1| conserved hypothetical protein; putative outer membrane protein
           [Bradyrhizobium sp. ORS278]
          Length = 198

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+     ++  +Q++G+ L+          + GHTD          N  LS  RA 
Sbjct: 88  FDYNSAEISKGSMQAVQELGKALSDPNLKGSTFVVAGHTDGI---GSDGFNQDLSERRAD 144

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L++  G+    +  + G+   +LK A++P +  NRR+ ++
Sbjct: 145 TIKRYLVEKYGLVGQDLVAV-GYGKTKLKDAANPADPLNRRVQVV 188


>gi|260778838|ref|ZP_05887730.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605002|gb|EEX31297.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 205

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           +++   +F   S    P     +  + + +       I I+G+   +     +  N  LS
Sbjct: 79  ERQLRILFANDSYDVSPVFSDQISAMADFMDRYRSASIEIQGYASKT---GNSDYNVELS 135

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334
             RA +  ++L+  G++ +R+  I GF    L+     +  ++ NRR+
Sbjct: 136 KKRAVAVEELLLSYGINPERV-TIVGFGATHLESTGEEETDHALNRRV 182


>gi|251733445|emb|CAR82472.1| pal [Bradyrhizobium elkanii]
          Length = 87

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 26/85 (30%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              +   P+    L K  + L        +I GH D          N  L   RA S   
Sbjct: 1   SDQTDLSPQATATLDKQAQWLQTYNRYSFTIEGHADER---GTREYNIALGARRAQSVRA 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   G+   R+  IS +   R   
Sbjct: 58  YLASRGIDPSRMRTIS-YGKERPVA 81


>gi|294663979|ref|ZP_06729397.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292606252|gb|EFF49485.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 144

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 13/116 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD   S    +   VL  +G  L   T + + +RGHTDA   +     N  LS  
Sbjct: 33  NDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSER 89

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILVE 339
           RA +             + +   G    +    +             NRR++I + 
Sbjct: 90  RANAVLA--ALRARGAAQSANAKGDGESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 143


>gi|251733467|emb|CAR82483.1| pal [Agrobacterium vitis]
          Length = 87

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + L   ++  I++ GH D          N  L   RA S   
Sbjct: 1   TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARRAASTKA 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325
            L+  G+  +RI  IS +   R     D
Sbjct: 58  YLVSRGIPANRIKTIS-YGKERPVATCD 84


>gi|91792753|ref|YP_562404.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91714755|gb|ABE54681.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 178

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           ++N   FD   S    +   +L   G  L  +  V   I GH D          N  L  
Sbjct: 72  RQNIIYFDFDRSDLQSDNADILNAHGNYLVENPSVRVLIEGHADER---GTPEYNIALGE 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
            RA +  + L   GV   ++S +S +   +       D   + NRR
Sbjct: 129 RRAKAIAKYLQGMGVQASQMSIVS-YGEEKPLDFSRDDSGFAKNRR 173


>gi|313667783|ref|YP_004048067.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica ST-640]
 gi|313005245|emb|CBN86678.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica 020-06]
          Length = 230

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + LA  + + + + GHTD   F    + N  LS  RA  
Sbjct: 94  LFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTD---FMGSEKYNQALSERRANV 150

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   + +  +G    +
Sbjct: 151 VANYLVSNGVPASK-TSAAGLGESQ 174


>gi|261401169|ref|ZP_05987294.1| OmpA family protein [Neisseria lactamica ATCC 23970]
 gi|269208842|gb|EEZ75297.1| OmpA family protein [Neisseria lactamica ATCC 23970]
 gi|309379032|emb|CBX22334.1| reduction-modifiable protein of the meningococcus [Neisseria
           lactamica Y92-1009]
          Length = 230

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + LA  + + + + GHTD   F    + N  LS  RA  
Sbjct: 94  LFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTD---FMGSEKYNQALSERRANV 150

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   + +  +G    +
Sbjct: 151 VANYLVSNGVPASK-TSAAGLGESQ 174


>gi|261867947|ref|YP_003255869.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413279|gb|ACX82650.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 274

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD        +   V+ K+   L  S  + + + G+TD          N  LS  RA
Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRL---GSKVYNMDLSQRRA 198

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336
                 L++ G+   +I+ + G+         ++  +S        NRR++I
Sbjct: 199 DRVKNRLIEQGID-VQINAV-GYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248


>gi|227114918|ref|ZP_03828574.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 170

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 10/159 (6%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            + A    K   +    + +  +  + D        +       +    + N   F    
Sbjct: 18  AVAACSSNKNADNDQSSMGTAGNNGMMDGGNMSSSEQARLQMQELQ---RNNIVYFGLDK 74

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                E   +L      L  +     +I GH D          N  L   RA +    L 
Sbjct: 75  YDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGERRANAVQMYLQ 131

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 132 GKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169


>gi|145588462|ref|YP_001155059.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046868|gb|ABP33495.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 167

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
             +  F         +   +L      L  +  + I I+G+TD       A  N  L   
Sbjct: 59  EKSVYFGFDEYTVQTKYQKMLSAHASYLKANPKQKIIIQGNTDER---GTAEYNLALGQR 115

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           R+ +  + L   GVS+D++  +S F   + K   D     + NRR DI+
Sbjct: 116 RSDAVRKSLNLMGVSDDQMEAVS-FGKEKPKAEGDSEAAFAENRRADIV 163


>gi|145219967|ref|YP_001130676.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
           DSM 265]
 gi|145206131|gb|ABP37174.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
          Length = 167

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
               ++  SS    +    L++    +  +    + + GH D       +  N  L   R
Sbjct: 62  GDVFYEFDSSELSADAEDQLKQNAAWMGANAAAATLVEGHCDER---GTSEYNIALGERR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339
           A +A + +++ GV    I  +S +   +       +   S NRR   +++
Sbjct: 119 AGNAKEYMVRLGVPAASIETMS-YGEEKPFAPGHDESAWSKNRRAHFVLK 167


>gi|7339728|gb|AAF60953.1|AF104936_1 outer membrane protein A precursor [Riemerella anatipestifer]
          Length = 387

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|71909661|ref|YP_287248.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71849282|gb|AAZ48778.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 180

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            + +  FD        E   ++    + L  +     + +G+TD          N  L  
Sbjct: 65  SQRSIYFDLDKYEVKDEYKDLVAAHAKYLVANKGFKVLLQGNTDER---GSREYNLSLGQ 121

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQG 343
            RA +  + L   GV +D+I  +S     + K A     +   NRR DIL +   G
Sbjct: 122 KRAEAVKRSLTLLGVKDDQIESVS-LGEEKPKDAGHDEAAWSQNRRADILYKAADG 176


>gi|16127077|ref|NP_421641.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|221235874|ref|YP_002518311.1| outer membrane protein A [Caulobacter crescentus NA1000]
 gi|13424457|gb|AAK24809.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|220965047|gb|ACL96403.1| outer membrane protein A [Caulobacter crescentus NA1000]
          Length = 191

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     F   S++      +VL          +   I + GH D          N  LS 
Sbjct: 83  REFIVYFPFDSAVLDESGQIVLVAAANYAKSGNATRIVVVGHADT---AGPDAYNIGLSE 139

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +    L+  G+S   I  +         +A+        NRR+ I
Sbjct: 140 RRAKATADTLVNLGISASTI-AVDWKGESAPAVATGDGVSEPLNRRVTI 187


>gi|257459073|ref|ZP_05624192.1| OmpA family protein [Campylobacter gracilis RM3268]
 gi|257443458|gb|EEV18582.1| OmpA family protein [Campylobacter gracilis RM3268]
          Length = 157

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 9/120 (7%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNI 280
           +   I  +  T  FD        +    +     +   +      + + G+ D       
Sbjct: 40  LASQIQSEVGTVYFDFDKFNIRADQQGTINNNAALFNQAGAESLTVKVEGNCDEW---GS 96

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
              N+ L L RA +A   L+  GV+E RI  +  +    +          + NRR +  V
Sbjct: 97  DEYNYALGLKRATAAKDALVAQGVNESRI-SVVSYGESNMACTEHSKECDAQNRRDEFKV 155


>gi|262275324|ref|ZP_06053134.1| outer membrane protein [Grimontia hollisae CIP 101886]
 gi|262220569|gb|EEY71884.1| outer membrane protein [Grimontia hollisae CIP 101886]
          Length = 197

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 14/166 (8%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +       +  +        +       ++    ++ ++     L   +   + I    
Sbjct: 21  ADEPPLAEQRSDLFDADSDGVINARDLCDNTPQEAVIDNDGCPTYLLLESNNSLRIQ--- 77

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
                 F   S+I  P     L K+   L    E    ++GHT +         N  LS+
Sbjct: 78  ------FANDSAIVEPAYREALDKMAGFLKLYPETFLELQGHTSS---PGSDDYNQNLSI 128

Query: 290 DRAYSAYQVLMKSGVSEDRISKI-SGFAHHRLKIASDPMNSANRRI 334
            RA +    L++ GV  DR++ I  G     L   ++     NRR+
Sbjct: 129 QRAKAVQAHLIEKGVPIDRLTLIGLGEGDLMLADNTETTQFVNRRV 174


>gi|254487179|ref|ZP_05100384.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
 gi|214044048|gb|EEB84686.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
          Length = 632

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 82/272 (30%), Gaps = 21/272 (7%)

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
            +  +        +   N  D  + E    +   LK      ++    +    F   +++
Sbjct: 353 GAVAVGAVLKNGSKVVSNSGDRLVVEDQNGDLRVLKDDDALVRQAGDEVRRETFNDGSAR 412

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
            +    +     +  G+D      +       E         E+ + +    +++     
Sbjct: 413 TTVTKPDGSKVVTILGRDGTVLRRINIDPQGNEYVLFDDTQVEQRIVVNELPQVEQTNTL 472

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIID-----------QRNTPMFDKSSSIPLPE 247
           +S      +   +   +     +   L  + D           + +   F+  S+   PE
Sbjct: 473 LSQQNEEALRVALETQLRDTQAQRFSLRQVRDIQQVRALAPEVELDALRFETGSAAIQPE 532

Query: 248 TIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               L KIG  +          VI I GHTDA         N  LS  RA +    L + 
Sbjct: 533 QARALAKIGTAITGAIRNDPRTVILIEGHTDAV---GNEGYNLALSDRRAETVALALTEY 589

Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
             V    +    G+    LK+ S     ANRR
Sbjct: 590 FDVPPANLIT-QGYGETALKVPSQTAQPANRR 620


>gi|153829514|ref|ZP_01982181.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
 gi|148874974|gb|EDL73109.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
          Length = 294

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 19/298 (6%)

Query: 51  MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++ I+        A+  +Y     ++    +     E                     K 
Sbjct: 9   LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           ++D ++         + +                + +  +  ++             +++
Sbjct: 69  NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E    P  S     +  ++  +      +SS L     +     +      +   IS  
Sbjct: 129 LEKGRYPTFSYRDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183

Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286
                  +D+  S      +   L +I E + ++ ++  +    +TD++   N +     
Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293


>gi|300787647|ref|YP_003767938.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
 gi|299797161|gb|ADJ47536.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
          Length = 410

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 19/285 (6%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG-----STNQKKQYQRLE 128
            +  T+S       +    + Q        EH   + V +  G       + +       
Sbjct: 129 LDAWTSSLVPQQPDSSLLDALQKVSRQIGTEHGPVSVVAVSNGLDNTAPLDLRVPLAGDA 188

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                                D +  +    S    +    E+ + +    +    A   
Sbjct: 189 TPESVAKMLAGDAEIPGLQGVDVQILELGQTSQGRRQMTEGEQRWIVSVWGEILKAAGVA 248

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K RL+  +  I       V  + V        +  +    +      +FD +S +  P  
Sbjct: 249 KPRLERKSGDILDGAPANVPADAVFAAAPPQPKPPVGTGSVSLSAQALFDPNSPVLAPAA 308

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             VL+    +L       +I GHT    P          LS+ RA +     ++  V  +
Sbjct: 309 EAVLRPYVTILQGPGAHATITGHTATWGPIPGRDL----LSVQRAEAVRNYFIEQHVPAE 364

Query: 308 RISKISGFAHHRLKIAS--------DPMNSANRRIDI-LVEDRQG 343
            ++   G       +          +     NRRI + +V   +G
Sbjct: 365 ALAPARGVGSSEQVVNDIDPAGNLIEQAAQRNRRIVLDIVTPTKG 409


>gi|26989809|ref|NP_745234.1| OmpA domain-containing protein [Pseudomonas putida KT2440]
 gi|24984708|gb|AAN68698.1|AE016499_3 OmpA domain protein [Pseudomonas putida KT2440]
          Length = 831

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 87/294 (29%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              ++        + +T +  +       +R+++    +S  + +   ++     + +  
Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS  Q+       L            +    KS+    +         
Sbjct: 600 NFGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARQTGKSMAAAGSEAGGNQDYL 659

Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                      + R  D+ + + +      + N +  +  ++ R    I++         
Sbjct: 660 YASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFG 719

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    E    L  I   L ++  +  I I GH D       ++ N ++S  RA + 
Sbjct: 720 RADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQL---GDSQGNLQVSKQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  GV  + +    G    +  +  D              NRR++I V  
Sbjct: 777 RTYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRG 829


>gi|156974662|ref|YP_001445569.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
 gi|156526256|gb|ABU71342.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
          Length = 204

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 7/165 (4%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           +    ++   LQD           L         +        + S        +F   S
Sbjct: 29  ETPKAEQIADLQDDDNDGVINARDLCPGTPATSEIDNDGCGEYIKSSEKMEVRVLFANDS 88

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
              +P     ++++ E L       I ++G+         A  N  LS  RA +    L+
Sbjct: 89  DEIVPVFRRQIRELSEFLKGYPSTSIELQGYASKI---GGAEHNLDLSKRRANNVRAALL 145

Query: 301 KSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343
             G+  DR+ +I GF    L      +  ++ NRR+   V   +G
Sbjct: 146 GYGIESDRV-RIVGFGDTHLAEQGTDEVSHALNRRVTASVIGYKG 189


>gi|194366090|ref|YP_002028700.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348894|gb|ACF52017.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 278

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 14/113 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291
             +F   S++   E    +Q +   +      + I + G+TD       A  N  LS  R
Sbjct: 163 DALFGFDSAVLSAEGQQAVQGVLAQVREASQVQSIRVTGYTDRI---GSASYNQALSQRR 219

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336
           A +    L++ GV    IS   G       +  +  N          NRR+ I
Sbjct: 220 AEAVRSALVQGGVPAASISA-EGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 271


>gi|149202387|ref|ZP_01879360.1| OmpA domain protein [Roseovarius sp. TM1035]
 gi|149144485|gb|EDM32516.1| OmpA domain protein [Roseovarius sp. TM1035]
          Length = 311

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +         L  + E L A     +++ GH+D+         N  LS  RA + 
Sbjct: 204 FGLGDNALGAGPYRSLVTLAEFLTASPETRVALVGHSDSI---GGLEQNSALSRARAEAV 260

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
             +L++  GV+  ++    G  +     ++        NRR+++++ D +
Sbjct: 261 LNLLVEQHGVAPAQVEA-HGIGYLSPIASNTSPEGRERNRRVEVVLLDAE 309


>gi|203287626|ref|YP_002222641.1| outer membrane protein [Borrelia recurrentis A1]
 gi|201084846|gb|ACH94420.1| outer membrane protein [Borrelia recurrentis A1]
          Length = 385

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   +    +  +  E  + GI +S+  +     F   S   + +    L+ I
Sbjct: 246 DNTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-----FYPDSFQIIRKEHNKLKHI 300

Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +L       I I GHT         ++   LS  RA++    L+K  V         G
Sbjct: 301 ANLLEKFQDNNILIEGHTAKF---GTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKG 357

Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340
           +   + K ++S P+ S NRR++I + +
Sbjct: 358 WGAKKPKYVSSSPLASKNRRVEITILN 384


>gi|203284088|ref|YP_002221828.1| outer membrane protein [Borrelia duttonii Ly]
 gi|201083531|gb|ACH93122.1| outer membrane protein [Borrelia duttonii Ly]
          Length = 385

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   +    +  +  E  + GI +S+  +     F   S   + +    L+ I
Sbjct: 246 DNTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-----FYPDSFQIIRKEHNKLKHI 300

Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +L       I I GHT         ++   LS  RA++    L+K  V         G
Sbjct: 301 ANLLEKFQDNNILIEGHTAKF---GTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKG 357

Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340
           +   + K ++S P+ S NRR++I + +
Sbjct: 358 WGAKKPKYVSSSPLASKNRRVEITILN 384


>gi|332305765|ref|YP_004433616.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173094|gb|AEE22348.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 185

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 8/162 (4%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               S+E++ A + +           +  + + A N+   +  E        +++D +  
Sbjct: 23  SSGPSEEELAAERNRVAAAQAEADRKAEEAKVQAGNMKPMLSPEEVMQKEKSALMDDQ-V 81

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S    +   +L +    L  +     +  GH D+         N  L   RA 
Sbjct: 82  VYFDFDRSSVGSKYYALLDQHAAFLVKNPGQSVVIEGHCDSR---GTPEYNIALGERRAK 138

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           S    LM +GVS  ++S +S +   +    S      + NRR
Sbjct: 139 SVETYLMNAGVSASQVSVVS-YGEEKPIDTSGTTAAFAENRR 179


>gi|330957696|gb|EGH57956.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 388

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 80/279 (28%), Gaps = 26/279 (9%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
              ++   A+ G + +      SS               +   K  +T            
Sbjct: 20  QTPQSDSAATGGHWWQFGSSNESSDAGAAAQAPAPGPAPAPVAKAAATPAPAAGSESSAP 79

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKS--------TDLEKSINKEENYFLPPLSKEK 182
            ++   S  +   K          K    S        T         +     P +   
Sbjct: 80  WYWPFGSNDNAQAKPDAVASKPADKPAAPSLVAKSETDTKWWWPFGANDGKTDEPKALPM 139

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                 +  L +   ++ + +              E     + I+         F+    
Sbjct: 140 PDPKVTQAWLDEYEPRLRAAIKDSPFQ-------LERREDLLAIT---APVDSSFNPDRP 189

Query: 243 IPL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
             L P T+  + ++ + +       + I GH D          N ++S +RA S   +  
Sbjct: 190 AMLLPNTLGPITRLAKAVEGDQKTAVLILGHADT---SGPTDANQKISQERAQSVAAIFR 246

Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            SG+  +R+  + G      + A+D     + NRR++IL
Sbjct: 247 LSGLERNRL-SLRGMGAVMPRAANDSLQGRALNRRVEIL 284


>gi|116693955|ref|YP_839488.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|116651955|gb|ABK12595.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
          Length = 103

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 6/104 (5%)

Query: 242 SIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQV 298
               P    ++  IG  +A S     + + G+TD  P       +N  LS  RA    ++
Sbjct: 1   MTVEPWWASMMATIGRTIAASVPGAYVQVVGYTDNVPAGAISRGNNQALSEARAREVARI 60

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
              +GV    IS  +G         +      S NRR+++ V +
Sbjct: 61  FAAAGVPMQNISA-TGQGDADPLADNGTAPGRSRNRRVEVTVSN 103


>gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi
           35000HP]
 gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi]
 gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus
           ducreyi 35000HP]
          Length = 407

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD + +    E   VL      + +    T  I + G+TD          N +LS 
Sbjct: 284 SDVLFDFAKADLKQEAAQVLDATNAEIVNLGLATPAIQVNGYTDRI---GKEEANLKLSQ 340

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA      L+  G +   I+ + G+        +               + +RR+++ V
Sbjct: 341 RRAEMVANYLVAKGQNPVSINAV-GYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQV 399

Query: 339 EDRQ 342
           +  +
Sbjct: 400 QGTK 403


>gi|50235083|gb|AAT70744.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +     +       + +  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDETCSETPGLPEFQGWPKPEGDGVPEKKKDCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             +   ++  C    T          K   LEK++           +            L
Sbjct: 171 EGAGPVETHGCPWPKT---------NKDGVLEKAVVCVNVAAPAENTGCPWPDTDNDGVL 221

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
               K             + +       +    +          F+ + +    E+   L
Sbjct: 222 DKDDKC-------PTCPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|251733447|emb|CAR82473.1| pal [Bradyrhizobium japonicum]
          Length = 87

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
              +   P+ IV L+K  + L +  +   +I GH D          N  L   RA S   
Sbjct: 1   SDQTDLTPQAIVTLEKQAQWLQNYRQYSFTIEGHADER---GTREYNIALGARRAQSVRS 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   G+  +R+  IS +   R   
Sbjct: 58  FLASRGIDPNRMRTIS-YGKERPVA 81


>gi|13472828|ref|NP_104395.1| hypothetical protein mll3244 [Mesorhizobium loti MAFF303099]
 gi|14023575|dbj|BAB50181.1| mll3244 [Mesorhizobium loti MAFF303099]
          Length = 967

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 32/294 (10%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
             D    + +              S+          + ++   D  I       + D + 
Sbjct: 692 EFDISKVRDVSPEARAAEHWQYYVSRLEAQPGIIVAQQTERGGDFYISGLRDPLAADPQA 751

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
                  +      +  +               + S         + ++  I        
Sbjct: 752 --LLHGTEVDPARVHSQWQFYQSLDPKFVVKRLQASLTPPKSVLLSIIQGRIVVVGEAPA 809

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             +++ +  A +       L       L+    +++ + +               Q    
Sbjct: 810 NWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAI---------------QATDI 854

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV---------ISIRGHTDASPFRNIARDNWR 286
            F     +P PE   VL ++ + +    E            + GH+DA+        N  
Sbjct: 855 FFYSGKVVPGPEQTPVLDRLADQIKEFAENARKSGVTARFMLTGHSDAT---GRETANAS 911

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           +S  RA +   +L K GV+ + +  + G       +  +    +S NRR+ I V
Sbjct: 912 ISAARAETVRALLNKRGVAPE-LLLVRGAGTFEPLVPENSQTGSSTNRRVSITV 964


>gi|307295611|ref|ZP_07575447.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
 gi|306878650|gb|EFN09870.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
          Length = 234

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD +   PLPE +  +  + +  A        + G+TD        R N  LSL RA +
Sbjct: 130 FFDWNMDAPLPEGVGTISTLTQTAAQCGWTRFGVTGYTDT---SGSNRYNDGLSLRRARN 186

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
              ++ + G++ D +  ++G    +LKI +        NRR++I 
Sbjct: 187 VASLMSQGGIATDAM-TVTGLGETQLKIETADGVREPMNRRVEIT 230


>gi|170721680|ref|YP_001749368.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169759683|gb|ACA72999.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 831

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              ++        + +T +  +       +R+++    ++  + +   ++     + +  
Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVTGVDSVEAEALPHDNRAQSIA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS +Q+ +     L            +    K ++             
Sbjct: 600 DFGKAALDTYVMLSPAQREKADPALLKARLPDYWYPAIARHTGKRMDAAGGESPANQDYL 659

Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                      + R  D+ + + +      + N +  +L ++ R+   I++         
Sbjct: 660 YASRQIVFYSDQIREPDVPRILDNAFLMSSSRNYINSLLTQSLRSIETITLESDTLFAFA 719

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    E    L  I   L ++  +  I I GH D       A+ N ++S  RA + 
Sbjct: 720 RADFQSLKSEGQNQLSAIASKLLNTPNIGKIIISGHADQL---GDAQGNLQVSRQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  GV  + +    G    +  +  D              NRR++I V  
Sbjct: 777 RTYLVGKGVPAE-LVSAQGEGSRKPLVNCDMQQPRAQLIKCLEPNRRVEIEVRG 829


>gi|124262903|ref|YP_001023373.1| outer membrane protein [Methylibium petroleiphilum PM1]
 gi|124262149|gb|ABM97138.1| outer membrane protein [Methylibium petroleiphilum PM1]
          Length = 217

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + GH D+         N RLS  RA +  +V + +G+S DR+ +I G     L   +D 
Sbjct: 146 RLTGHADSQ---GSDLYNLRLSERRARAVSKVFLGAGISADRL-EIEGRGERDLIDLAD- 200

Query: 327 MNSANRRIDILVEDRQ 342
             + NRR++I +   +
Sbjct: 201 -GAKNRRVEIRLVGGE 215


>gi|330447940|ref|ZP_08311588.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492131|dbj|GAA06085.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 298

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284
             D R+  + F+    +        L  +   L H   +  +   GHTD       +  N
Sbjct: 175 YRDARDVVLQFNLGQRVVSSSQKQTLVDLASYLKHDKNIKRVLIDGHTDNV---GSSVAN 231

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++S  RA     +L ++GV    + +I           ++     + NRR+ I
Sbjct: 232 LQISKVRADDVASILRENGVRSS-LMEIRSHGSRYPVANNNTQQGKAKNRRVTI 284


>gi|150024643|ref|YP_001295469.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771184|emb|CAL42651.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 284

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 11/107 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  ++     ++   L ++  V+    E+I  I GH           D   LS  RA + 
Sbjct: 181 FITNTFAVTNDSRGKLYELLLVMQQRPEMIISIHGHLCCVSV-----DRKDLSTQRAKAV 235

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILV 338
            Q L  +G+ + R+    GF            ++   +ANRR++I V
Sbjct: 236 KQFLELNGIEKTRMD-FKGFGSSIPLFPLPENTEEERAANRRVEIEV 281


>gi|149374319|ref|ZP_01892093.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
 gi|149361022|gb|EDM49472.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
          Length = 310

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288
           +R+   F   S+         L  I   +    + E + + GHTD+        DN  LS
Sbjct: 186 KRSRISFASGSTSLSDADRRFLDNIVMYIQADSTVERVFVDGHTDS---SGSRIDNRALS 242

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-NRRIDILVED 340
            +RA +    L+  G+  D +      A             A NRR  I ++ 
Sbjct: 243 EERANAVADYLIGQGIEAD-LVTTRAHADQYPV----SRRPADNRRTTIRLQR 290


>gi|325336487|gb|ADZ12761.1| OmpA3 [Riemerella anatipestifer RA-GD]
          Length = 473

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283
            +        F  +S +  P++   L     ++       + + + G TD       A  
Sbjct: 354 EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 410

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334
           N  LS  RA S  + L+  GVS   + K  G   + LK           +  N ANRR+
Sbjct: 411 NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 468


>gi|315022385|gb|EFT35413.1| Thrombospondin type 3 repeat:OmpA/MotB [Riemerella anatipestifer
           RA-YM]
          Length = 145

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283
            +        F  +S +  P++   L     ++       + + + G TD       A  
Sbjct: 26  EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 82

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334
           N  LS  RA S  + L+  GVS   + K  G   + LK           +  N ANRR+
Sbjct: 83  NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 140


>gi|313206072|ref|YP_004045249.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312445388|gb|ADQ81743.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
          Length = 473

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283
            +        F  +S +  P++   L     ++       + + + G TD       A  
Sbjct: 354 EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 410

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334
           N  LS  RA S  + L+  GVS   + K  G   + LK           +  N ANRR+
Sbjct: 411 NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 468


>gi|70728662|ref|YP_258411.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68342961|gb|AAY90567.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 418

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 23/224 (10%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                 +  +     ++ +     +   DSE            K ++K     +P    +
Sbjct: 139 SSKDSSDKPVAEAKKAEPAPAPAVTAAADSETHWWWPFPKSQPKPLSKVNVADIPMPDPK 198

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A      L D   ++   +           +  E     ++++ +       F+   
Sbjct: 199 ITQA-----WLDDYEPRLREAVKDSK-------LQIERRENVLVVTALVD---ASFNPDR 243

Query: 242 SIPL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
              L P T+    ++ + +       + I GH DA+        N +LS DRA S   + 
Sbjct: 244 PAMLLPVTLGPFTRVAKAVEGDPKTAVLILGHADAT---GPTLANQKLSRDRAQSVAAIF 300

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             SG+ +DR+  + G      + A+D     S NRR++I++  R
Sbjct: 301 SLSGLKQDRLM-LRGMGSVMPRAANDSPQGRSLNRRVEIMLTQR 343


>gi|332883506|gb|EGK03789.1| hypothetical protein HMPREF9456_01856 [Dysgonomonas mossii DSM
           22836]
          Length = 660

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               ++   +  LPE+   L  + ++L  +    I +  H D    +     N +LS  R
Sbjct: 521 ENIFYEFDKATLLPESKKELDGLIDLLNTNPNVTIELSAHADR---KGSDDYNIKLSQRR 577

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
           A S    L+  G+S+DR++ + G      K
Sbjct: 578 AESVVNYLIAGGISKDRLTAV-GKGKSEPK 606


>gi|86159756|ref|YP_466541.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776267|gb|ABC83104.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 242

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S    ++   LQK+ + L  +      ++G+ D       A+ N  L   RA +A
Sbjct: 141 FAFDRSNLTADSQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAEAA 197

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            + L   GV    +  +S +   +   +       + NRR D  +E 
Sbjct: 198 KKYLTDLGVGST-VDTVS-YGEEKPVCSEATEACWAKNRRDDFQIER 242


>gi|127512720|ref|YP_001093917.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
 gi|126638015|gb|ABO23658.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
          Length = 251

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 57/224 (25%), Gaps = 11/224 (4%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
             Q  +  NN      +         L                   I +          +
Sbjct: 25  ATQATQSTNNSSADEEALIGVGSGIVLGAVVAGPVGAIIGAFTGGMIGQTVANDSEIKQQ 84

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           +  LA +  + +    +  +              +       G  +  +       F   
Sbjct: 85  QATLAEQESRMMALKQQNEALLTVQQEYQEAKVELAQLRQHQGTRLEELALGLNVQFKTG 144

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           SS   P     L ++ + +A S +  + + G+ D       +  N  LS  R       L
Sbjct: 145 SSTVEPHFQSQLNEVADAMAISPQLKLDLTGYADRR---GDSSYNQALSEQRVAEVRSYL 201

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVE 339
           +  GV E R+     +               N    RR+ I + 
Sbjct: 202 VSKGVDEARLDA-KAYGASAPVKDEQSFE--NDFFDRRVTIKLL 242


>gi|308186600|ref|YP_003930731.1| type VI secretion system, core protein [Pantoea vagans C9-1]
 gi|308057110|gb|ADO09282.1| Putative type VI secretion system, core protein [Pantoea vagans
           C9-1]
          Length = 405

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 14/152 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + L DL ++++  ++    +     V      + ++I         +F +  ++  P   
Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L ++   +      I +   TD  P   +    ++  S  RA +  Q+L    + +  
Sbjct: 301 ALLARVSTAMKDVKGTILVSVFTDDHPVDNSRFASSYEFSFARARAITQLLQLQ-LEDGH 359

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             +  G       + +D     + NRR++I +
Sbjct: 360 TVRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391


>gi|322380701|ref|ZP_08054840.1| flagellar motor protein MotB [Helicobacter suis HS5]
 gi|321146869|gb|EFX41630.1| flagellar motor protein MotB [Helicobacter suis HS5]
          Length = 258

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 14/202 (6%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            +L ++  K  D     D  + +           +  +  + K  +        I+    
Sbjct: 48  KALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQ 107

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
           G + + I +GV+ +   + +  +  D              + E I  + KI   L     
Sbjct: 108 GAILEQIAQGVVLKLPSSLLFENSYDDTINA--------TMREYIHRIAKIIHALPDQI- 158

Query: 265 VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            I +RG TD +P    +  +D++ L+  RAY   +VL+  G+   ++   + +  +    
Sbjct: 159 RIDVRGFTDNTPLPSNSRFKDHYALAASRAYKVMKVLLSDGIDPQKL-SFTSYGKNDPIA 217

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
            ++ +     N R++I     Q
Sbjct: 218 PNNSLEERLHNNRVEIFFHADQ 239



 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K A          W + YADF+++L+A F+ ++ I+  +    KA+++ F          
Sbjct: 5   KKAKPVECPAGERWAVPYADFLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRP 64

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
                    PP          +      +NS   ++  T   + 
Sbjct: 65  DSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQG 108


>gi|315453529|ref|YP_004073799.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
 gi|315132581|emb|CBY83209.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
          Length = 253

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 1/116 (0%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+  +    KA+++ F         
Sbjct: 3   KKAKKVECPAG-ERWAVPYADFLSLLLALFIALYAISVVNKAKVKALKKEFLKIFDYAPI 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                     PP    + +  +   E   +++          +       +    L
Sbjct: 62  PDSFQPVIPIPPAPGGRQEDTIEERESTQQSNPSQTTIKKIGEGSVLEQTDQGSVL 117



 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 64/179 (35%), Gaps = 9/179 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
                  + F P +        +++  +++      S  S      I +G + E T  G 
Sbjct: 56  FDYAPIPDSFQPVIPIPPAPGGRQEDTIEERESTQQSNPSQTTIKKIGEGSVLEQTDQGS 115

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRN--I 280
           ++ +         +             + +I  ++      +   +RG+TD +P      
Sbjct: 116 VLKLPSSLIFT--EPYGDTINATMQEYIGRIASIIRALPSQVQINVRGYTDNTPIPAHIP 173

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            +D++ L+  RA    + L+  G++  ++   + +  +   + +D       N R++I 
Sbjct: 174 FKDHYALAASRASKVMRELIADGINPQKL-SFTSYGANNPIVPNDSIENRMRNNRVEIF 231


>gi|332882569|ref|ZP_08450181.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679369|gb|EGJ52354.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 399

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 62/202 (30%), Gaps = 13/202 (6%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
              D         + D E    +           +  +A K+ K        I   +   
Sbjct: 202 GKEDKHADWAANSAKDNEDVAKRVAALEDNVSDLKGKVANKQDKMNDANGNGIPDEIENY 261

Query: 207 VADN-------IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           + +N              + +   +   I     +  FD +SS P   +   +  + + L
Sbjct: 262 LNNNYQAKGGSAANNNNSDFSGDVVSDLIKKGYISAYFDFNSSTPQVSSTWAIDIVVKYL 321

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             ++   I I G+ D          N  LS  RA +   +L+K+GVS  RIS   G    
Sbjct: 322 KENSGANILISGYADEL---GGTNYNSSLSQKRANAVKDILVKAGVSASRIST-EGKGED 377

Query: 319 RLKIASDP-MNSANRRIDILVE 339
                S        RR    ++
Sbjct: 378 TSVDKSSSRARQIARRATFSLK 399


>gi|51598427|ref|YP_072615.1| outer membrane protein [Borrelia garinii PBi]
 gi|51572998|gb|AAU07023.1| outer membrane protein [Borrelia garinii PBi]
          Length = 389

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K +  E    GI +S   +     F   S   L +    L  I
Sbjct: 250 DNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIE-----FYPDSFQILQKEYKKLDLI 304

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L       I I GHT+      +  + + LS  RA +    L+K  V         G
Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKG 361

Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340
           +   + K   S P+ + NRR++I + +
Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388


>gi|322379332|ref|ZP_08053708.1| flagellar motor protein MotB [Helicobacter suis HS1]
 gi|321148245|gb|EFX42769.1| flagellar motor protein MotB [Helicobacter suis HS1]
          Length = 258

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 14/202 (6%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
            +L ++  K  D     D  + +           +  +  + K  +        I+    
Sbjct: 48  KALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQ 107

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264
           G + + I +GV+ +   + +  +  D              + E I  + KI   L     
Sbjct: 108 GAILEQIAQGVVLKLPSSLLFENSYDDTINA--------TMREYIHRIAKIIHALPDQI- 158

Query: 265 VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            I +RG TD +P    +  RD++ L+  RAY   +VL+  G+   ++   + +  +    
Sbjct: 159 RIDVRGFTDNTPLPSNSRFRDHYALAASRAYKVMKVLLSDGIDPQKL-SFTSYGKNDPIA 217

Query: 323 ASDPMNSA--NRRIDILVEDRQ 342
            ++ +     N R++I     Q
Sbjct: 218 PNNSLEERLHNNRVEIFFHADQ 239



 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K A          W + YADF+++L+A F+ ++ I+  +    KA+++ F          
Sbjct: 5   KKAKPVECPAGERWAVPYADFLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRP 64

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
                    PP          +      +NS   ++  T   + 
Sbjct: 65  DSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQG 108


>gi|119952965|ref|YP_945174.1| outer membrane protein [Borrelia turicatae 91E135]
 gi|119861736|gb|AAX17504.1| outer membrane protein [Borrelia turicatae 91E135]
          Length = 385

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I   +   ++   +  +  E    GI +S+  +     F   S   + +    L+ I
Sbjct: 246 DNIIEHEVKEYISTKQIDSINIEKNENGIKLSLDIE-----FYPDSFQIIKKEYNKLKHI 300

Query: 256 GEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +L       I I GHT         ++   LS  RA+S    L+K  V         G
Sbjct: 301 ANLLEKFKDNNILIEGHTAKF---GTEQEMQELSEKRAHSIGNYLLKMKVKNKNQIFFKG 357

Query: 315 FAHHRLKIAS-DPMNSANRRIDILVED 340
           +   + K A+  P+ S NRR++I + +
Sbjct: 358 WGAKKPKYANSSPLASKNRRVEITILN 384


>gi|269962097|ref|ZP_06176451.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
 gi|269833181|gb|EEZ87286.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
          Length = 293

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 10/158 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q   ++I   LS ++                +  S  D   T + +++        +
Sbjct: 140 QDWQSRDQRIEVALSSVLFQ-SKYNAFSNCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198

Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L +I + + H+ ++  +    +TD++  ++ ++    LS  RA S        G+S 
Sbjct: 199 KKRLSQIADYVRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRTYFESLGLSG 255

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292


>gi|322435990|ref|YP_004218202.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321163717|gb|ADW69422.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 260

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 60/212 (28%), Gaps = 26/212 (12%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             + ++      +      +  +   K     ++   +         +    A +  +  
Sbjct: 54  VQNTNELDAKTASDHRALVDTDERATKGIAGAQAAADQAGQHATAAGQSADQANQAAQGA 113

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +    ++  ++ L     +  V                     F    ++        L
Sbjct: 114 SNRVDSLNGVIANLDNYKQLSDVSVT------------------FGFDKTVLTKSDKEQL 155

Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRIS 310
             +   L  +   +  + G TD+      A+ N++LS  RA +    L  K  V   +  
Sbjct: 156 DGLAASLQSARGYLLEVTGGTDSV---GDAQYNYKLSQRRADAVVDYLSAKYNVPPHKFY 212

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVED 340
            + G        +       + NRR+++ +  
Sbjct: 213 LV-GIGKDAQIASDKTASGRAQNRRVEVKLMS 243


>gi|160890582|ref|ZP_02071585.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492]
 gi|156859581|gb|EDO53012.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492]
          Length = 392

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
              DD   K    Y N  G  +   +                 +      + TK   +  
Sbjct: 111 TQVDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 170

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172
             +     +++        L  S      K       + G D  L  +  L         
Sbjct: 171 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 230

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    ++     + +L ++        + LVA           T   I+       
Sbjct: 231 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 289

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+  S+   P   + L  + + +        ++ G+ D+         N  LSL R
Sbjct: 290 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 347

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +   VL+K  G+  DR+   +G  
Sbjct: 348 AQAVVDVLVKQYGIPADRLKVDAGGG 373


>gi|124005287|ref|ZP_01690128.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123989109|gb|EAY28687.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 436

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 3/109 (2%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           + ++  F    S    +    L +    L     +      T  +        N +L+  
Sbjct: 28  RTSSVYFAYKQSELSAKAKQKLDQTFARLYRKQVLDYEVTLTGLADSVGNVAANHQLANK 87

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           RA +    L+  GV  D++  +      R    ++  +  NRR++I++ 
Sbjct: 88  RALAVKTYLIAQGVGADKV-TVKVLGE-RP-ANNEDEHRRNRRVEIVLR 133


>gi|331015715|gb|EGH95771.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 320

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 11/212 (5%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             ++   S  +   K          K    +   +   + +  +      ++        
Sbjct: 19  PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPM 78

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
              +     +      L A         E     + I+         F+      L P T
Sbjct: 79  PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135

Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +
Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           R+S+  G      + A+D     + NRR++IL
Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223


>gi|157737823|ref|YP_001490507.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
 gi|315637613|ref|ZP_07892819.1| lipoprotein [Arcobacter butzleri JV22]
 gi|157699677|gb|ABV67837.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
 gi|315478067|gb|EFU68794.1| lipoprotein [Arcobacter butzleri JV22]
          Length = 174

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 15/160 (9%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            EK   +       D A   +    G + +    G  +      +LI          F  
Sbjct: 21  SEKNADVDNVVGANDAASVEAPIQDGTLLEKASNGNYYMINGQRVLIE------HVYFGF 74

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                  +           L+  +   +++  G+TD          N+ L L RA +   
Sbjct: 75  DKYNLTADNKSKAVSNASKLSAVSSDTTVKVLGNTDEW---GSDEYNYALGLKRANAVKD 131

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
           VL+ +GV+ +    +                  + NRR++
Sbjct: 132 VLVANGVTTN--ISLVSLGESNPVCTEKTKDCWAQNRRVE 169


>gi|78065362|ref|YP_368131.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77966107|gb|ABB07487.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 170

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 68  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + A   +   + NRR D++
Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQAAGHDEASWAQNRRADLV 167


>gi|317491198|ref|ZP_07949634.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920745|gb|EFV42068.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 171

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + N   F         +   +L      L ++     ++ GH D    
Sbjct: 53  EEQARLQMQELQKNNIVYFGLDKYDVSSDYAQMLDAHAAFLRNNPSYKVTVEGHADER-- 110

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA +    L   GV  D+IS +S +   +  +        + NRR  
Sbjct: 111 -GTPEYNIALGERRANAVKMYLQGKGVGADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 168

Query: 336 IL 337
           ++
Sbjct: 169 LV 170


>gi|126726180|ref|ZP_01742022.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
 gi|126705384|gb|EBA04475.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
          Length = 305

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
              +F   S+         L+ +  +L  + E  +I  GHTDA         N  +S  R
Sbjct: 196 EDLLFQPGSADLTAGDYASLENLAALLKENPEKKAILVGHTDAV---GALEVNIAISEKR 252

Query: 292 AYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334
           A S   +++ +  +S DR+S   G      + ++D       NRR+
Sbjct: 253 AISVMTRMVEQYEISADRLSA-KGVGFLAPRASNDTDEGRQKNRRV 297


>gi|56476929|ref|YP_158518.1| outer membrane protein, porin-associated lipoprotein [Aromatoleum
           aromaticum EbN1]
 gi|56312972|emb|CAI07617.1| Outer membrane protein, porin-associated lipoprotein [Aromatoleum
           aromaticum EbN1]
          Length = 175

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            + +  FD    +  PE   +++     L  + ++   I+G+TD          N  L  
Sbjct: 65  SKRSVFFDFDQFVIKPEARPLVEAHARFLVQNPQMKMLIQGNTDEL---GSREYNLALGQ 121

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RA +  Q L   G  E +I  +S     + +      +  + NRR
Sbjct: 122 KRADAVRQALTLLGAKESQIESVS-LGEEKPRCGESSESCFAQNRR 166


>gi|307609455|emb|CBW98949.1| hypothetical protein LPW_07341 [Legionella pneumophila 130b]
          Length = 240

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   I       +  ++ K  +           II      MF   S          L  
Sbjct: 84  LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 141

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +  I + G TD            +LS  +A +    L  +G++  R+    
Sbjct: 142 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 197

Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336
           G+        +     ++ NRRI+I
Sbjct: 198 GYGDKNAISDNAIIHGSAQNRRIEI 222


>gi|290473839|ref|YP_003466713.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
 gi|289173146|emb|CBJ79919.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
          Length = 373

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 18/140 (12%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTD 273
             T    +       R+  +F+ + S    E    L  +   LA    +   + + GHTD
Sbjct: 228 IPTPAPTVENKSFTLRSDVLFNFNKSTLKTEGKQELDNLYTQLAKIDPNQGRVLVIGHTD 287

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS 329
                   + N  LS  RA S    L+  G+    I    G             +    +
Sbjct: 288 RI---GSQQYNLPLSQKRAESVVDYLVAKGIPAASIQA-EGRGKEGSVTGSTCDNIKGRA 343

Query: 330 A-------NRRIDILVEDRQ 342
                   +RR+ I ++  +
Sbjct: 344 KLIDCLAPDRRVVINIQGTK 363


>gi|148360690|ref|YP_001251897.1| OmpA family transporter outer membrane protein [Legionella
           pneumophila str. Corby]
 gi|148282463|gb|ABQ56551.1| outer membrane protein, OmpA family protein [Legionella pneumophila
           str. Corby]
          Length = 240

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   I       +  ++ K  +           II      MF   S          L  
Sbjct: 84  LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 141

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +  I + G TD            +LS  +A +    L  +G++  R+    
Sbjct: 142 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 197

Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336
           G+        +     ++ NRRI+I
Sbjct: 198 GYGDKNAISDNAIIHGSAQNRRIEI 222


>gi|52840894|ref|YP_094693.1| outer membrane protein, OmpA family protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628005|gb|AAU26746.1| outer membrane protein, OmpA family protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 249

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   I       +  ++ K  +           II      MF   S          L  
Sbjct: 93  LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 150

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +  I + G TD            +LS  +A +    L  +G++  R+    
Sbjct: 151 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 206

Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336
           G+        +     ++ NRRI+I
Sbjct: 207 GYGDKNAISDNAIIHGSAQNRRIEI 231


>gi|54293640|ref|YP_126055.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
 gi|54296680|ref|YP_123049.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
 gi|296106245|ref|YP_003617945.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
           Alcoy]
 gi|53750465|emb|CAH11859.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
 gi|53753472|emb|CAH14927.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
 gi|295648146|gb|ADG23993.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 230

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   I       +  ++ K  +           II      MF   S          L  
Sbjct: 74  LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 131

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +  +L    +  I + G TD            +LS  +A +    L  +G++  R+    
Sbjct: 132 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 187

Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336
           G+        +     ++ NRRI+I
Sbjct: 188 GYGDKNAISDNAIIHGSAQNRRIEI 212


>gi|152984801|ref|YP_001349685.1| hypothetical protein PSPA7_4332 [Pseudomonas aeruginosa PA7]
 gi|150959959|gb|ABR81984.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
          Length = 293

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 70/243 (28%), Gaps = 12/243 (4%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           D+  T      +  +  +                 Q           +    K    +  
Sbjct: 49  DDGQTVARQAAEPKAEAEHVGSSHWWWPFGKDEAGQDVAAKAAEQKAEIAAAKKDVAAAA 108

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
             K+ N     F    + +        ++ +   + + +    L           E    
Sbjct: 109 EPKTANPWWWPFGASSAGKASGKPALVQQ-KVTKEWLDAHEKALREAIAGSEFTLERRDN 167

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI 280
            +++          F+      L    +        +A       I + GHTD++     
Sbjct: 168 ALIVIAPADY---SFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDST---GS 221

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              N +LS +RA S   +   SG+  D++ ++ G      +  +      + NRR+++L 
Sbjct: 222 KAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLKGVGSDMPRADNSSAAGRAQNRRVEVLY 280

Query: 339 EDR 341
             R
Sbjct: 281 TQR 283


>gi|197121340|ref|YP_002133291.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|220916043|ref|YP_002491347.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|196171189|gb|ACG72162.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|219953897|gb|ACL64281.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 170

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   +    P     ++++   L                  + GHTD       
Sbjct: 52  RKNQCSFKTDTDQLEPGCDQKMKRLSNALVDAKKRLNGAGVKNFKFVVSGHTDT---SGS 108

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A  N  LS  RA    + L+  G+ +  I  + G    +  +   D     + NRR ++ 
Sbjct: 109 AAHNQELSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQ 167

Query: 338 VE 339
           V+
Sbjct: 168 VK 169


>gi|323496692|ref|ZP_08101743.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
 gi|323318274|gb|EGA71234.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
          Length = 204

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           +++   +F   S    P     +Q + E L       I I+G             N  LS
Sbjct: 78  ERQLRILFANDSYEINPIFSDQIQTMAEFLEKYQSASIQIQGFASKV---GEPEYNLELS 134

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334
             RA++    L+   V   R+  I G+   RL+     +  ++ NR++
Sbjct: 135 KKRAHAVEDELLSYYVEPSRV-SIIGYGETRLEAQGDDETSHALNRKV 181


>gi|313677243|ref|YP_004055239.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943941|gb|ADR23131.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 771

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
           S+++      FD  +S    +    LQ+I + +  + +  I I G+  A         N 
Sbjct: 658 SLLEPVYKIYFDVGASEFDAKYNEQLQEIYQKIKGNEQLGIQISGYASAE---GDPEFNR 714

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +LS  RA          G+   RI    G+   R   A     + NRR+++ + D
Sbjct: 715 KLSNKRAIEVVNFFNYKGIVRRRIIA-KGYGSTR---ADTKDAAENRRVEVQIVD 765


>gi|304383837|ref|ZP_07366295.1| OmpA family protein [Prevotella marshii DSM 16973]
 gi|304335093|gb|EFM01365.1| OmpA family protein [Prevotella marshii DSM 16973]
          Length = 689

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D + +   PE+   L ++ ++L  +    I +R H D   +R     N
Sbjct: 513 ITAPVLIDNIFYDFNRATLRPESTAALDELVKLLQENPHVTIELRAHCD---YRGSDIYN 569

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---------------------- 322
             LS  RA +    L+  G+++DR+S + G+   R KI                      
Sbjct: 570 KVLSQRRAEAVTAYLVAHGIAKDRLSPV-GYGKERPKIIRRKLTERYPWMKEGDVLSESY 628

Query: 323 -------ASDPMNSANRRIDILVED 340
                    D  N  NRR + +V  
Sbjct: 629 IKRLDASRQDVCNQLNRRTEFIVLR 653


>gi|301384367|ref|ZP_07232785.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302133682|ref|ZP_07259672.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 320

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 11/212 (5%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             ++   S  +   K          K    +   +   + +  +      ++        
Sbjct: 19  PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPM 78

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
              +     +      L A         E     + I+         F+      L P T
Sbjct: 79  PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135

Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +
Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           R+S+  G      + A+D     + NRR++IL
Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223


>gi|146312725|ref|YP_001177799.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
 gi|145319601|gb|ABP61748.1| OmpA/MotB domain protein [Enterobacter sp. 638]
          Length = 161

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+ S    E+   +Q +  +LA +      + GHTD          N  LSL R
Sbjct: 53  DKILFGKNESQLRAESEQQIQSMASLLAGTGLTHARMDGHTDNY---GEESYNQSLSLKR 109

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           A        K + +    ++   G        ++      + NRR+ +++
Sbjct: 110 ANVVADAWAKGANIPRSNLTT-QGLGKKYPVASNSTSQGRAENRRVAVVI 158


>gi|221134413|ref|ZP_03560718.1| peptidoglycan-associated lipoprotein [Glaciecola sp. HTCC2999]
          Length = 188

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 7/165 (4%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
           P  ++      +         +         V     + +             +    T 
Sbjct: 26  PSEAELAAERNRVAAEQAAAQQAAEQANQEQVRLEAAQRLQQAQEIAEQERDELMSMQTV 85

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   +    +   VL K    L  +  + I I GHTD+         N  L   RA +
Sbjct: 86  YFDFDRATIKADFYNVLDKHAAFLVKNMDQTIVIEGHTDSR---GTPEYNIALGERRAQA 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
                + +GVS  +I  +  F   +  +        + +RR  ++
Sbjct: 143 VETYFLNAGVSASQI-SVVSFGEEKPAVTGTSEYAFAQSRRAVVV 186


>gi|109390002|gb|ABG29730.1| OmpA [Riemerella anatipestifer]
          Length = 255

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 70/265 (26%), Gaps = 24/265 (9%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
              AS  +       ++     +D            + +             ++N   ++
Sbjct: 1   FWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCPEVA 60

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              ++  C    T             D+          +                   D 
Sbjct: 61  GPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD----------------TDN 104

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              +           + +       +    +          F+ + +   PE+   L + 
Sbjct: 105 DGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKLDQA 164

Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++    G
Sbjct: 165 AEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS-KG 220

Query: 315 FAH---HRLKIASDPMNSANRRIDI 336
                      AS+     +R++ +
Sbjct: 221 VGSAEATVPASASNEERMKDRKVVV 245


>gi|30314416|gb|AAP15417.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
          Length = 150

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     +   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 48  FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + +     +   + NRR D++
Sbjct: 105 RRAMALPGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147


>gi|283786225|ref|YP_003366090.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
 gi|282949679|emb|CBG89298.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
          Length = 160

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +T +FDK+      ++   +Q +   LA    +   + GHTD          N  LSL R
Sbjct: 52  DTILFDKNDYTLRAQSRQQIQAMAARLASVGLKHARMDGHTDNY---GEESYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A        +            G        ++      + NRR+ +++
Sbjct: 109 ANVVADAWAEGAQIPRSNLTTQGLGKKYPIASNKTAKGRAENRRVAVVI 157


>gi|253699085|ref|YP_003020274.1| OmpA/MotB domain protein [Geobacter sp. M21]
 gi|251773935|gb|ACT16516.1| OmpA/MotB domain protein [Geobacter sp. M21]
          Length = 1709

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSLDR 291
           F    +    E + +L+ + E +     V     GH D             DN  LS +R
Sbjct: 109 FRTGDAEISSEYLELLRGVLEKMRGRDNVRLHFVGHADTQQLSGPLKEKFGDNTGLSRER 168

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           A +  +   ++           G    +    +        NRR+++ V
Sbjct: 169 AGTTAEYCQRALALPPEAISYQGLGDAKPVAPNSTEEGRALNRRVEVEV 217



 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 67/235 (28%), Gaps = 27/235 (11%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
             Q+L   +            + + T      + L    +        +   + P S E+
Sbjct: 146 DTQQLSGPLKEKFGDNTGLSRERAGTTAEYCQRALALPPEAISYQGLGDAKPVAPNSTEE 205

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG------------ILISIID 230
             A+ R+  ++    +I   +         +    +  RT               + + +
Sbjct: 206 GRALNRRVEVEVWYDEIGEKMVEKEVVVPAQVNRVKVCRTETVCKMRYKEGLSHRVRVRN 265

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR----DNW 285
                 +D +      E    +++  + L       +    ++D SP          D  
Sbjct: 266 LIAPLQYDAALLTVPEEFQQRIRQALDNLQGKQNLSVKFIAYSDTSPLEARDERIYGDQL 325

Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
            LS     R A +  + +  S V+     +  G        +++       NRR+
Sbjct: 326 GLSKAVARRVALAVQEAMKGSKVA----FESDGKGSALPVASNETPQGRVLNRRV 376


>gi|163745388|ref|ZP_02152748.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
 gi|161382206|gb|EDQ06615.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
          Length = 317

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  +S         L+++ E+L       +++ GHTDA         N  LS  RA + 
Sbjct: 212 FETGTSALGAGPFATLERLAELLKADPGLRVALVGHTDAV---GSLEANTVLSRKRAEAV 268

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            + L+    V  DR+    G  +   + ++        NRR++++V   +
Sbjct: 269 RERLVQSYDVDPDRLEA-RGAGYLAPRGSNLTEAGREENRRVEVVVLSAE 317


>gi|320354880|ref|YP_004196219.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
           2032]
 gi|320123382|gb|ADW18928.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
           2032]
          Length = 170

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+  SS    E +  ++   + +  + +  I I G+ D          N  L   RA
Sbjct: 65  PVYFEFDSSSITGEQVQRIETNADFIKKNPDLKIRIEGNCDPR---GTQEYNIALGERRA 121

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338
            SA   L+  GV+ ++++ +S F   +L      +   + NRR D ++
Sbjct: 122 QSAKTYLINLGVNSNQLTTVS-FGEEKLLLFGHDEISWAQNRRDDFVI 168


>gi|157736533|ref|YP_001489216.1| periplasmic protein [Arcobacter butzleri RM4018]
 gi|157698387|gb|ABV66547.1| conserved hypothetical protein, probable periplasmic protein
           [Arcobacter butzleri RM4018]
          Length = 329

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 53/326 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+ + +I A        + +Y                  Q+  E 
Sbjct: 13  W-ISYADLMAGLL--FVFILVIGAI-------VIKYVYA---------------QSSLES 47

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           S + K  L  +   TKN  +      ++ K    L+ +      +   E+  NS     +
Sbjct: 48  SEEAKSQLFYELAKTKNLYESTKDELDKAKNQINLKLSEIEKLKALLLEYELNSKDEKDK 107

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             K   + ++    I+ +++       K  +L    +K +++    I+      +    +
Sbjct: 108 SEKLALELSEKTNLISLKDDELKLLADKLLVLTQVHQKMVEEFD--IAKLKIKTLTGIKL 165

Query: 213 KGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQK----------IG 256
             +     + G  I+I ++          +FD++S I   E+   L              
Sbjct: 166 NVISKLREKLGKSINIDEKSGAIKFSSNILFDQNSYILKEESKKELSTVLKQYLNTLLDD 225

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI---- 312
           + +    E I+I GHT++         N +LS  RA +  Q L +S + + ++       
Sbjct: 226 KEIKKYIESITIEGHTNSD---GTYLSNLQLSQQRALAVMQFLYESNIIDKKLLGTYVNS 282

Query: 313 SGFAHHRLKIAS--DPMNSANRRIDI 336
           SG +   L +    +  +++ RRI+I
Sbjct: 283 SGRSSSDLILKDGVEDKDAS-RRIEI 307


>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
 gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
          Length = 322

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+   S  + E+          L        +SI G+TDA   +     N   SL RA  
Sbjct: 214 FEFGESRFVVESKQWHSWNELALSVKQGQGKVSITGYTDA---KGTDSANDIESLRRATY 270

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
           A  +L+K+GV E+RI  I+        +  D M    + NRR+ I    R G
Sbjct: 271 AADMLIKAGVDEERIL-INSKGSADPLVNEDLMRNESALNRRVVIQFNRRVG 321


>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
 gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
          Length = 324

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+   S  + E+          L        +SI G+TDA   +     N   SL RA  
Sbjct: 216 FEFGESRFVVESKQWHSWNELALSVKQGQGKVSITGYTDA---KGTDSANDIESLRRATY 272

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343
           A  +L+K+GV E+RI  I+        +  D M    + NRR+ I    R G
Sbjct: 273 AADMLIKAGVDEERIL-INSKGSADPLVNEDLMRNESALNRRVVIQFNRRVG 323


>gi|115522545|ref|YP_779456.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516492|gb|ABJ04476.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
          Length = 628

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 56/148 (37%), Gaps = 16/148 (10%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           LA  +         D I            I        NT  F+  S    P+  + LQ 
Sbjct: 467 LAPPVERIERRYSLDEIRYSPSVRQRMPSI------DLNTITFESGSWDIAPDQALKLQA 520

Query: 255 IGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDR 308
           I + L         EV  I GHTDA+       DN  LS  RA SA  +L +  GV  + 
Sbjct: 521 IADGLNRAIERNPREVFLIEGHTDAT---GNDTDNLSLSDRRAESAAALLTQQFGVPAEN 577

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDI 336
           ++   G+    LK+ +     ANRR+ +
Sbjct: 578 LTS-QGYGEQYLKVPTQGPELANRRVTV 604


>gi|49083180|gb|AAT50966.1| PA1048 [synthetic construct]
          Length = 294

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 73/270 (27%), Gaps = 11/270 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             T        + P E++S +       +     +          +          F   
Sbjct: 21  FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              +    K +  +          +   E        +     S  K        + +  
Sbjct: 81  EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + + +    L           E     +++          F+      L          
Sbjct: 141 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITRNPLGK 197

Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
              +A       I + GHTD++        N +LS +RA S   +   SG+  D++ ++ 
Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G      +  +      + NRR+++L   R
Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283


>gi|327403146|ref|YP_004343984.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327318654|gb|AEA43146.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 249

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ ++++   E+I  L+K+  +L   ++  + + GH   +           LS  RA + 
Sbjct: 149 FENANAVVKAESIPNLEKLNRILLEDTSLFVRLNGHVCCT-------SAQELSFQRANTV 201

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
              L+K G+ + RI    GF++ +L +  +     + NRR++ +   +
Sbjct: 202 MTYLLKHGIPQSRIYA-EGFSNTQLLVPDNSEENMAINRRVEAIFYRK 248


>gi|150388324|ref|YP_001318373.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948186|gb|ABR46714.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 314

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 86/235 (36%), Gaps = 19/235 (8%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           Q  Q +   +N+       Q     + +     + +D   +  L +   ++++  +   +
Sbjct: 58  QDTQQRLEASNLEISQAEDQLRLLTDRVDEIKAEVEDGEIALRLSELQIEDQSQIIAESN 117

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FD 238
           +E      R + +  L   + + +   V + + +      +   I  +     +  + FD
Sbjct: 118 RELGNLRSRLQGIAVLRLDVLNRVKDSVEEEMARTRDRRDSPVYIADNGNIVIDEELVFD 177

Query: 239 KSSSIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            +S    P    VL +             +  + + I+I+GHTD       A  N  LS 
Sbjct: 178 LNSYQIKPAGRQVLDELAMAFENILRDPEVRVNIDAINIQGHTDDI---GSAEYNRNLSA 234

Query: 290 DRAYSAYQVLMKSG-VSEDRISK---ISGFAHHRLKIASDPM--NSANRRIDILV 338
           +R+      L+ S    E+R +     S ++  R   ++      + NRRI+I +
Sbjct: 235 NRSVEVVNYLLNSNPTLENRYASYFMASAYSKFRPIASNATEANRAQNRRIEISI 289


>gi|317479876|ref|ZP_07938993.1| OmpA family protein [Bacteroides sp. 4_1_36]
 gi|316903950|gb|EFV25787.1| OmpA family protein [Bacteroides sp. 4_1_36]
          Length = 392

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
              DD   K    Y N  G  +   +                 +      + TK   +  
Sbjct: 111 TQMDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 170

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172
             +     +++        L  S      K       + G D  L  +  L         
Sbjct: 171 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 230

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    ++     + +L ++        + LVA           T   I+       
Sbjct: 231 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 289

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+  S+   P   + L  + + +        ++ G+ D+         N  LSL R
Sbjct: 290 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 347

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +   VL+K  G+  DR+   +G  
Sbjct: 348 AQAVVDVLVKQYGIPADRLKVDAGGG 373


>gi|270295719|ref|ZP_06201919.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273123|gb|EFA18985.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 397

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
              DD   K    Y N  G  +   +                 +      + TK   +  
Sbjct: 116 TQMDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 175

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172
             +     +++        L  S      K       + G D  L  +  L         
Sbjct: 176 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 235

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    ++     + +L ++        + LVA           T   I+       
Sbjct: 236 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 294

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+  S+   P   + L  + + +        ++ G+ D+         N  LSL R
Sbjct: 295 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 352

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +   VL+K  G+  DR+   +G  
Sbjct: 353 AQAVVDVLVKQYGIPADRLKVDAGGG 378


>gi|307718765|ref|YP_003874297.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
 gi|306532490|gb|ADN02024.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
          Length = 1337

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 77/263 (29%), Gaps = 23/263 (8%)

Query: 92   RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                          +    + + +  T        +++ +     ++     +      +
Sbjct: 1083 GDEMTVESSPFVLDVQPPELSISLSPTPFSPDNDGVDDELAISIRARDLTGIQTWEIVIT 1142

Query: 152  EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            +   +       + S   +  +    LS E + + +    +     ++ +T        +
Sbjct: 1143 DPYGNPFTRFGGQGSPAPQIIWDGRSLSGELVSSAEDYPLIFTATDRVGNTARFET--KV 1200

Query: 212  VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263
               VL       + I I        F  + +  + +     +K   ++         +  
Sbjct: 1201 SVDVLVIREGDKLKIKISSIH----FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRR 1256

Query: 264  EVISIRGHTDASPFRNIARDNWR----LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              I I GH  A       R+       LSL RA +  Q L+  G+   RI+   G     
Sbjct: 1257 YKIRIEGH--AVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGRITTA-GMGGRF 1313

Query: 320  LKIA--SDPMNSANRRIDILVED 340
              +    +     NRR++ ++  
Sbjct: 1314 PIVPHTDEKNRWKNRRVEFILLK 1336


>gi|293390339|ref|ZP_06634673.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950873|gb|EFE00992.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 274

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD        +   V+ K+   L  S  + + + G+TD          N  LS  RA
Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRL---GSKVYNMDLSQRRA 198

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336
                 L++ G+   +I+ + G+         ++  +S        NRR++I
Sbjct: 199 DRVKNRLIEQGID-VQINTV-GYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248


>gi|90581709|ref|ZP_01237497.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
 gi|90437124|gb|EAS62327.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
          Length = 261

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 71/216 (32%), Gaps = 7/216 (3%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                        +  +Q E  +  L   + +G   C      K  N         LS  
Sbjct: 23  PAPGETPLPPPKQAQLRQLELHQFELQLLAIRGAKHCLPGQYIKLQNLYLQARKEALSGF 82

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A     + Q     I   +  L  + +     +          +  + +   F  + 
Sbjct: 83  DHDAEMTLLKYQTQNAVIQQQMDWLEYNTLCLQPNYSEVELKERFLLYMEVDNQ-FALNK 141

Query: 242 SIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S  LP+    L+   E+L   S   + + G+TD+       + N+ L L+RA +    L+
Sbjct: 142 STLLPKYRESLRYAAEILKRQSHWHLQLTGYTDSQ---GHIQGNYMLGLERANAVKDSLI 198

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRR-ID 335
           ++GV  ++I  +     ++    +      N R ++
Sbjct: 199 ENGVDPNQI-SVFSVGENQAVADNTLTQQLNNRKVE 233


>gi|89889840|ref|ZP_01201351.1| OmpA family protein [Flavobacteria bacterium BBFL7]
 gi|89518113|gb|EAS20769.1| OmpA  family protein [Flavobacteria bacterium BBFL7]
          Length = 625

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 11/116 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   FD  +S   P+  + L ++   +    E  +    + D    R     N  L+  R
Sbjct: 514 NKIYFDLDASNIRPDAALELDRLVSFMKKYPELEVMAETYAD---IRGSDSYNLALTQRR 570

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDR 341
           A S    ++  GV   R++ + G       +       +      +RR +  +  R
Sbjct: 571 AESIVAYVVSQGVDASRLTAV-GRGEANPVMDCASQKCTSAEYELSRRSEFTITKR 625


>gi|89053487|ref|YP_508938.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88863036|gb|ABD53913.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 217

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S+    E   +L +    + +  E   S+ GHTDA         N RL   RA +A
Sbjct: 79  FAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSNG---YNQRLGRRRARAA 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
              L+  GVS  R++ +      +  +A+D     NRR
Sbjct: 136 VNFLVSQGVSRHRLAALVSLGETQPVVATDMEERRNRR 173


>gi|115358599|ref|YP_775737.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115283887|gb|ABI89403.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 163

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD       PE   +LQ   + L +       I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GV   ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161


>gi|224532865|ref|ZP_03673480.1| outer membrane protein [Borrelia burgdorferi WI91-23]
 gi|224512254|gb|EEF82640.1| outer membrane protein [Borrelia burgdorferi WI91-23]
          Length = 381

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           I + +   + +  +K +  E    GI +S   +     F  +S   L +    +  I ++
Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299

Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316
           L       I I GHT+      +  +   LS  RA +    L+K  V  +D+I    G+ 
Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355

Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340
             + K   S P+ + NRR++I + +
Sbjct: 356 SQKPKHPKSSPLKAKNRRVEITILN 380


>gi|58584412|ref|YP_197985.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418728|gb|AAW70743.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 159

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 17/136 (12%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            +GV        ++  + ++R    FD   S         L  + EVL       +++ G
Sbjct: 23  KRGVNAINKMNFVVKQMKEKR--VFFDYDKSDISEAGADTLLDVMEVLQDDPNVKVTLIG 80

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP- 326
           HTD          N  L   RA +A   ++  +   E+RI   S          +A D  
Sbjct: 81  HTDNR---GSYEYNVALGARRADAAKNFMVSCTPYLENRIKTAS-KGETEPLVYVADDSK 136

Query: 327 ------MNSANRRIDI 336
                  ++ NRR++ 
Sbjct: 137 NSKYEKEHAKNRRVEF 152


>gi|315185632|gb|EFU19400.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
          Length = 1337

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 77/263 (29%), Gaps = 23/263 (8%)

Query: 92   RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
                          +    + + +  T        +++ +     ++     +      +
Sbjct: 1083 GDEMTVESSPFVLDVQPPELSISLSPTPFSPDNDGVDDELAISIRARDLTGIQTWEIVIT 1142

Query: 152  EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
            +   +       + S   +  +    LS E + + +    +     ++ +T        +
Sbjct: 1143 DPYGNPFTRFGGQGSPAPQIIWDGRSLSGELVSSAEDYPLIFTATDRVGNTARFET--KV 1200

Query: 212  VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263
               VL       + I I        F  + +  + +     +K   ++         +  
Sbjct: 1201 SVDVLVIREGDKLKIKISSIH----FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRR 1256

Query: 264  EVISIRGHTDASPFRNIARDNWR----LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              I I GH  A       R+       LSL RA +  Q L+  G+   RI+   G     
Sbjct: 1257 YKIRIEGH--AVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGRITTA-GMGGRF 1313

Query: 320  LKIA--SDPMNSANRRIDILVED 340
              +    +     NRR++ ++  
Sbjct: 1314 PIVPHTDEKNRWKNRRVEFILLK 1336


>gi|312884808|ref|ZP_07744500.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367460|gb|EFP95020.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 266

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            F    S    E    L      +    +   I + G++D+      +  N +LS  RA 
Sbjct: 151 FFASGKSSLSSEQRETLSAFYSYIKVADNINRILVDGYSDS---AGSSVVNLQLSRQRAQ 207

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-SANRRIDILVED 340
           +A   L   G +E  + ++       L   +   + + NRR+ + +  
Sbjct: 208 AAADYLQFLG-TEQNLIEVRAHGERYLFNNNASNSGAKNRRVTLRLVR 254


>gi|262197769|ref|YP_003268978.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081116|gb|ACY17085.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 333

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 10/227 (4%)

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
            S +  +    +     + + +   +   + +         +    + + ++    ++  
Sbjct: 111 GSSEANVREVERVLARNQPQRDRDVVVARRSTPTQPTRKAEEPTGTRRIAQTPTERRTEE 170

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
                   P      +  +  +    +A    +     V     +       R   + S 
Sbjct: 171 PTRTPTPTPTPTPTEVEPEPTREPTRVATLPRAEREDEVERTTPRRTEKPRQRNAKVPSF 230

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
                   F  +S         +L +    L  + E   +I GHTDA      A  N  L
Sbjct: 231 T---KELYFGSNSVRLSARNRRLLMRNVRWLEANPEASLTIEGHTDA---SGPAEYNLIL 284

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
              RA S    L++ GV   RI  +S      LK      ++ NRR+
Sbjct: 285 GERRAESVQSFLIEQGVDSGRIDVVS-RGEDDLKYK--SGSAKNRRV 328


>gi|254524741|ref|ZP_05136796.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
           sp. SKA14]
 gi|219722332|gb|EED40857.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
           sp. SKA14]
          Length = 280

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291
             +F   S+    E    +Q I   +      + I + G+TD       A  N  LS  R
Sbjct: 165 DALFGFDSAKLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRI---GSASYNQALSQRR 221

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336
           A +    L++ GV    IS   G       +  +  N          NRR+ I
Sbjct: 222 ADAVRTALVQGGVPAGSISA-EGRGAAEPIVQCEQHNRRELIACLAPNRRVQI 273


>gi|315635693|ref|ZP_07890956.1| chemotaxis protein MotB [Arcobacter butzleri JV22]
 gi|315479990|gb|EFU70660.1| chemotaxis protein MotB [Arcobacter butzleri JV22]
          Length = 329

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 53/326 (16%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W I YAD M  L+  F+ + +I A        + +Y                  Q+  E 
Sbjct: 13  W-ISYADLMAGLL--FVFILVIGAI-------VIKYVYA---------------QSSLES 47

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           S + K  L  +   TKN  +      ++ K    L+ +      +   E+  NS     +
Sbjct: 48  SEEAKSQLFYELAKTKNLYESTKDELDKAKNQINLKLSEIEKLKALLLEYELNSKDEKDK 107

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             K   + ++    I+ +++       K  +L    +K +++    I+      +    +
Sbjct: 108 NEKLALELSEKTNLISLKDDELKLLADKLLVLTQVHQKMVEEFD--IAKLKIKTLTGIKL 165

Query: 213 KGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQK----------IG 256
             +     + G  I+I ++          +FD++S I   E+   L              
Sbjct: 166 NVISKLREKLGKSINIDEKSGAIKFSSNILFDQNSYILKEESKKELSTVLKQYLNTLLDD 225

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI---- 312
           + +    E I+I GHT++         N +LS  RA +  Q L +S + + ++       
Sbjct: 226 KEIKKYIESITIEGHTNSD---GTYLSNLQLSQQRALAVMQFLYESNIIDKKLLGTYVNS 282

Query: 313 SGFAHHRLKIAS--DPMNSANRRIDI 336
           SG +   L +    +  +++ RRI+I
Sbjct: 283 SGRSSSDLILKDGVEDKDAS-RRIEI 307


>gi|167584247|ref|ZP_02376635.1| outer membrane protein, OmpA/MotB family [Burkholderia ubonensis
           Bu]
          Length = 165

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  +     E + +LQ   + L         I+G+TD       +  N  L   R+++ 
Sbjct: 64  FDFDAYDVKSEYLTLLQAHADYLRRHPSQRVLIQGNTDER---GTSEYNLALGQRRSHAV 120

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
              L+  GV E ++  +S F   +       +   S NRR D++
Sbjct: 121 MSALVTLGVPETQLEAVS-FGKEKPVALGHDEASWSQNRRADMV 163


>gi|269123640|ref|YP_003306217.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
           DSM 12112]
 gi|268314966|gb|ACZ01340.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 314

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ +  I   + I V+  +   L +    I + G+TD        + N  L L+RA S  
Sbjct: 218 FNSNKFILNKKQIDVIDALVPNLQNRE--IIVIGYTDTD---GNDKYNLELGLNRANSVK 272

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             L   G+  ++I  +     + L   ++ + +   NRR++++V+
Sbjct: 273 VYLENKGIKVNQIRTV---GFNELITNNNTLENKSLNRRVELIVK 314


>gi|119474630|ref|ZP_01614983.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
 gi|119450833|gb|EAW32066.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
          Length = 110

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 11/105 (10%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
              +AD M++LM FF+++   +  D    K +                  F  QN  +  
Sbjct: 1   MSTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------FGVQNKLDMK 49

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
              K    I +  +    D    +   +      E ++   +   
Sbjct: 50  DPPKGTSIIAQEFSPGRPDPTPINQIYQYTDDLTELSLEVKAAED 94


>gi|119896707|ref|YP_931920.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
 gi|119669120|emb|CAL93033.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
          Length = 172

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            +    FD  S +   +   +++  G  LA + ++   ++G+ D          N  L  
Sbjct: 62  SKRNVFFDFDSYVIKADAKPLVEAHGRFLAQNPQMKMLVQGNADER---GSREYNLALGQ 118

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RA +  Q L+  G  E +I  +S     + +         + NRR
Sbjct: 119 KRADAVKQALLLLGAKEAQIESVS-LGEEKPRCTESSEACFAQNRR 163


>gi|148547849|ref|YP_001267951.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
 gi|148511907|gb|ABQ78767.1| OmpA/MotB domain protein [Pseudomonas putida F1]
          Length = 831

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 87/294 (29%), Gaps = 19/294 (6%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              ++        + +T +  +       +R+++    +S  + +   ++     + +  
Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIA 599

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              +   +    LS  Q+       L            +    KS+    +         
Sbjct: 600 NFGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARHTGKSMAAAGSEAGGNQDYL 659

Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                      + R  D+ + + +      + N +  +  ++ R    I++         
Sbjct: 660 YASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFG 719

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
                    E    L  I   L ++  +  I I GH D       ++ N ++S  RA + 
Sbjct: 720 RADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQL---GDSQGNLQVSKQRAQTI 776

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340
              L+  GV  + +    G    +  +  D              NRR++I V  
Sbjct: 777 RTYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRG 829


>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
          Length = 348

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 47/148 (31%), Gaps = 16/148 (10%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265
           V   +            ++           F    +   P    VL  I   +A      
Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324
           +++ G+TD          N +LS  RA +    L   GV+++ IS  +G         + 
Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLEAKGVAQNAISA-TGHGEANPVTGNK 320

Query: 325 -DPMNSA---------NRRIDILVEDRQ 342
            D +            +R ++I V+  +
Sbjct: 321 CDSVKGRKALIACLADDRPVEIAVKGNK 348


>gi|257482066|ref|ZP_05636107.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 65

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           N  LS  RA S    L   GV +  +  + G    +   ++      + NRR+++ ++  
Sbjct: 2   NMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPI 60

Query: 342 QG 343
            G
Sbjct: 61  PG 62


>gi|228469693|ref|ZP_04054661.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
 gi|228308712|gb|EEK17438.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
          Length = 559

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288
           +Q +   +D   +    E    L  +  +L  + +V   +  +TD    +   R N RLS
Sbjct: 423 EQIHDIYYDFDRASLRLEGKKSLDYLVTLLEQNPDVRLELSSNTDR---KGSQRYNKRLS 479

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----------------------- 325
             RA S    L+  G++ DR+    G+   R  + +                        
Sbjct: 480 QRRAQSVVNYLIAKGIAADRLEA-RGYGKERPYVVTKGMATRFDWLPEGQELTAEWVGAL 538

Query: 326 PMNSA------NRRIDILV 338
                      NRR +  V
Sbjct: 539 TEEQQVVCDQLNRRTEFTV 557


>gi|157369523|ref|YP_001477512.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
           proteamaculans 568]
 gi|157321287|gb|ABV40384.1| Peptidoglycan-associated lipoprotein [Serratia proteamaculans 568]
          Length = 171

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + N   F         E   +L      L ++     ++ GH D    
Sbjct: 53  EEQARLQMQELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRNNPSYKVTVEGHADER-- 110

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   R+ S    L   GVS D+IS +S +   +  +        + NRR  
Sbjct: 111 -GTPEYNIALGERRSNSVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 168

Query: 336 IL 337
           ++
Sbjct: 169 LV 170


>gi|319795794|ref|YP_004157434.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
 gi|315598257|gb|ADU39323.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
          Length = 167

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
                FD       P+   +++     L + +    +  GHTD+         N  L   
Sbjct: 61  PKIVYFDFDKYNIRPQDQRIVEAHASFLKNRSTSRVVIEGHTDSR---GGREYNLALGQR 117

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           R+ S  + L + GV  +R+  IS +   +             NRR + 
Sbjct: 118 RSESVQRALTQLGVPAERVEAIS-WGIEKPASMETTEEGYQLNRRAEF 164


>gi|170703595|ref|ZP_02894341.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           IOP40-10]
 gi|172063336|ref|YP_001810987.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           MC40-6]
 gi|170131500|gb|EDT00082.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           IOP40-10]
 gi|171995853|gb|ACB66771.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
           MC40-6]
          Length = 163

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
           + +  FD       PE   +LQ   + L +       I+G+TD       +  N  L   
Sbjct: 57  KRSVYFDFDQYSVKPEYQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +    L   GV   ++  +S     +       +   + NRR D++
Sbjct: 114 RSQAVMSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161


>gi|288926326|ref|ZP_06420250.1| OmpA family protein [Prevotella buccae D17]
 gi|288336931|gb|EFC75293.1| OmpA family protein [Prevotella buccae D17]
          Length = 684

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   ++   +   PE+   L ++ ++L  +    I +  H D   ++     N
Sbjct: 509 ITAPVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCD---YKGSMEYN 565

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
            RLS  RA +    L+  G++ DR++   G+   R K
Sbjct: 566 KRLSQRRAEAVVAYLVGHGIARDRLTPA-GYGKERPK 601


>gi|188527909|ref|YP_001910596.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Shi470]
 gi|188144149|gb|ACD48566.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Shi470]
          Length = 183

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 6/162 (3%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            KE +      K +Q       +           K            +       +  FD
Sbjct: 24  DKEAVAGDVSAKAVQSAPVSTETVQEKQEPKEEPKQEPAPVVEEKPAVESGTIIASIYFD 83

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                        L +I +    +   + + G+TD       +  N  L + R  S    
Sbjct: 84  FDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNA 140

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 141 LIIKGVEKDMIKTIS-FGETKPKCTQKTKECYKENRRVDVKL 181


>gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis]
          Length = 305

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 219 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 275

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            RA +    ++  GV+   ++ + G+     
Sbjct: 276 KRAETVANYIVSKGVNPANVTAV-GYGEANP 305


>gi|220921404|ref|YP_002496705.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219946010|gb|ACL56402.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 213

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+      + V++ +G  LA       +I I GHTDA   +   R N  LS  RA 
Sbjct: 102 FAYNSATIGRTALPVVKMLGATLARPQLASSIILIVGHTDA---KGSDRVNQLLSERRAE 158

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           +  Q ++++ GV    +  + G+   RLK  ++P+  ANRR+
Sbjct: 159 AVKQYIVQNYGVPAGNLVAV-GYGKSRLKDPANPLAPANRRV 199


>gi|15596245|ref|NP_249739.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
 gi|218892990|ref|YP_002441859.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|254234184|ref|ZP_04927507.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
 gi|254239405|ref|ZP_04932727.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
 gi|313105999|ref|ZP_07792260.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
 gi|9946962|gb|AAG04437.1|AE004537_2 probable outer membrane protein precursor [Pseudomonas aeruginosa
           PAO1]
 gi|126166115|gb|EAZ51626.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
 gi|126192783|gb|EAZ56846.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
 gi|218773218|emb|CAW29030.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           LESB58]
 gi|310878762|gb|EFQ37356.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
           39016]
          Length = 293

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             T        + P E++S +       +     +          +          F   
Sbjct: 21  FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              +    K +  +          +   E        +     S  K        + +  
Sbjct: 81  EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + + +    L           E     +++          F+      L    +     
Sbjct: 141 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 197

Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
              +A       I + GHTD++        N +LS +RA S   +   SG+  D++ ++ 
Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G      +  +      + NRR+++L   R
Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283


>gi|254390197|ref|ZP_05005416.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294814756|ref|ZP_06773399.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|326443135|ref|ZP_08217869.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|197703903|gb|EDY49715.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327355|gb|EFG08998.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 250

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 69/242 (28%), Gaps = 10/242 (4%)

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
           +     +                  L      L  +  +      L   +    D     
Sbjct: 1   MGGTTARRPAAPAARRPAALVLAAALLLTGGQLHAATAATAAGPGLRPPAAGADDPVPPP 60

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
             + ++   E+  LPP+ +      +       L  +  +TL+     +IV  V  E   
Sbjct: 61  GEDPALPPVEDPALPPVGEAATPLPQIDADNPGLRMREGATLAEPRVLDIVSIVESEGGE 120

Query: 222 TGILISI----IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASP 276
                +        +   +F + S    P     +  I E +  +  + + + G TD   
Sbjct: 121 ERREQTTVSLKFALQAEVLFGRDSHELNPRANSRIAAIAEEIRRNGAKQVRVFGFTDDL- 179

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
                R    LS  RA + + +L            + G++       +        NRR+
Sbjct: 180 --GSYRHGRTLSRKRADAVHAMLDGQVEDHTVSYIVRGYSEDFPIADNSTEEGREKNRRV 237

Query: 335 DI 336
           ++
Sbjct: 238 EV 239


>gi|332519342|ref|ZP_08395809.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045190|gb|EGI81383.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 311

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 9/116 (7%)

Query: 228 IIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I        FD    S     +    + KI   +       I I GHTD +        N
Sbjct: 199 IKANSLMLYFDTGAASINLTTQQREKVSKIVRYIDKVDNAKIRITGHTDNT---GNRETN 255

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L  +RA  A   L+++G++ ++I+  S          +      + NRR+ + +
Sbjct: 256 IGLGKNRAEFAKSYLVQNGITSNKINTFS-KGPDEPIADNSTEAGKAKNRRLVVTI 310



 Score = 40.3 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                   L+++   L  + +  I + G+  A      A  N  L L RA +     +  
Sbjct: 88  VSDGLKTQLERVAAYLKDNPDKAIDVTGYYTAEEKNESAFPN--LGLARANAIKNYFVSI 145

Query: 303 GVSEDRISKISGFAH 317
           GVS  +I+    +  
Sbjct: 146 GVSTKKINT---YGE 157


>gi|170288056|ref|YP_001738294.1| OmpA/MotB domain-containing protein [Thermotoga sp. RQ2]
 gi|170175559|gb|ACB08611.1| OmpA/MotB domain protein [Thermotoga sp. RQ2]
          Length = 288

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 34/118 (28%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              ++       W   Y+D +T+L+ FF+ +  ++       + +             + 
Sbjct: 3   KKREEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                  N     +  +        +++            +     L++ +F+   S 
Sbjct: 63  LMGGRSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFEPGSA 120



 Score = 52.3 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267
           +     +  E    G LI + D      F+  S+    E   +L K+G++ + H+T V+ 
Sbjct: 90  EEYKGKITVEERDEGTLIVLKD---MVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLE 146

Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + G+ D       +I   NW LS  RA S     +   + E R+ +
Sbjct: 147 VYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191


>gi|86157306|ref|YP_464091.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773817|gb|ABC80654.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 170

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 17/122 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280
           ++N   F   +    P     ++++   L                  + GHTD       
Sbjct: 52  RKNQCSFKTDNDQLEPGCDQKMKRLSNALVDAKKRLNGAGVKNFKFVVSGHTDT---SGS 108

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337
           A  N  LS  RA    + L+  G+ +  I  + G    +  +   D     + NRR ++ 
Sbjct: 109 AAHNQELSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQ 167

Query: 338 VE 339
           V 
Sbjct: 168 VR 169


>gi|82523947|emb|CAI78669.1| OmpA protein [uncultured delta proteobacterium]
          Length = 408

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +        +  L+     +  ++  I I GHTD       +  N + SL+RA + +
Sbjct: 305 FGMNELAMNEAALAELKVFYNKVKDASGKIVIEGHTD---GHGDSAANLKASLERAVNTW 361

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           + L   G+S+    ++ G    +    ++       NRR+++ 
Sbjct: 362 RKLQSMGLSDKIKVELRGVGGSKPVADNNTQEGRDKNRRVELT 404


>gi|29829787|ref|NP_824421.1| secreted protein [Streptomyces avermitilis MA-4680]
 gi|29606896|dbj|BAC70956.1| putative secreted protein [Streptomyces avermitilis MA-4680]
          Length = 226

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 19/223 (8%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           T ++             + +  +       +  ++ G        +  S   + +   P 
Sbjct: 4   TPRRATATATATATTLTALAVLATLTLTVPSAVADDGDPSAPPGSVTTSPPPDVDANSPG 63

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L       +   K L D+   +         ++    V F              +   +F
Sbjct: 64  LKLADGATLAPAKVL-DIKSVVEDLGGEERREDTNADVTFAL------------QAEVLF 110

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            K S    PE    +  I + +       + + G TD             LS  RA + +
Sbjct: 111 PKDSPKLNPEARSRINAIADEIKKQNATNVRVFGFTDNL---GSYAHGLTLSKKRAEAVH 167

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             L  +  S+D   ++ G++       +        NRR+++ 
Sbjct: 168 DQLASALGSQDVTFEVRGYSEDYPIADNTSEQGRRKNRRVEVT 210


>gi|91792756|ref|YP_562407.1| OmpA/MotB [Shewanella denitrificans OS217]
 gi|91714758|gb|ABE54684.1| OmpA/MotB [Shewanella denitrificans OS217]
          Length = 289

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +++  +     +   L+K+ E L++  EV  + I G TD+         N  +S +RA S
Sbjct: 184 YEEGDTELTHFSKYQLKKVQEYLSYDPEVELVLIDGFTDSY---GPKSINQTVSNNRADS 240

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
             Q+L+ SG+ +D+I   +G    R   +++       NRR+ I +
Sbjct: 241 IKQLLIASGIPKDKIIS-NGHGEKRHVASNELVQERERNRRVVIQL 285


>gi|308063911|gb|ADO05798.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Sat464]
          Length = 179

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALIIKGVEKDMIKTIS-FGETKPKCTQKTKECYKENRRVDVKL 177


>gi|194295656|gb|ACF40855.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295658|gb|ACF40856.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295660|gb|ACF40857.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295662|gb|ACF40858.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295664|gb|ACF40859.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295666|gb|ACF40860.1| outer membrane protein [Riemerella anatipestifer]
          Length = 270

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 66/248 (26%), Gaps = 21/248 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 42  LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 101

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T +           ++   +      +                  
Sbjct: 102 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 145

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 146 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262

Query: 312 ISGFAHHR 319
             G     
Sbjct: 263 -KGVGSAE 269


>gi|329849481|ref|ZP_08264327.1| ompA family protein [Asticcacaulis biprosthecum C19]
 gi|328841392|gb|EGF90962.1| ompA family protein [Asticcacaulis biprosthecum C19]
          Length = 408

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 9/114 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286
             D+     F+   S    +   V+    +         + + GH D       A  N R
Sbjct: 297 YEDRTFIVYFEFDKSDLTADAQAVVSAAADYAKTGGAARVVVVGHADT---SGSAAYNIR 353

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336
           LS  RA +    L   GV   ++  +      +  +A+        NRR  IDI
Sbjct: 354 LSERRAKTVADALAGLGVDGSKL-AVDWKGESQPAVATGDGVKEPLNRRSTIDI 406


>gi|24217389|ref|NP_714872.1| outer membrane protein OmpA [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45655825|ref|YP_003634.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24202471|gb|AAN51887.1| OmpA-family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|45602796|gb|AAS72271.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 383

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+K+S     E+   L ++   +   + +   + GHT           N ++SL RA + 
Sbjct: 281 FEKNSIQIHKESRPSLNRLARWMKQDSSIRVKVIGHTS---LEGSEDANQKVSLLRAQTV 337

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              +  +G+S+DR   I           +        NRR+++ +
Sbjct: 338 RNYIAGNGISKDRFEIIP-KGASVPIGDNSKEEGKEMNRRVELRI 381


>gi|21223388|ref|NP_629167.1| secreted protein [Streptomyces coelicolor A3(2)]
 gi|8218177|emb|CAB92608.1| putative secreted protein [Streptomyces coelicolor A3(2)]
          Length = 203

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 18/194 (9%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +    S+             +    E     P  K    A   + ++ D+   +      
Sbjct: 18  ASVGVSQSYAADDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGD 77

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264
              ++    V                +   +F K SS    E    ++ I + +   +  
Sbjct: 78  ERREDTNTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRTQNAT 125

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + + G TD       +     LS  RA + + VL +S        ++ G+        +
Sbjct: 126 RVRVFGFTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADN 182

Query: 325 DPMNSA--NRRIDI 336
                   NRR+++
Sbjct: 183 STEAGRKKNRRVEV 196


>gi|144898731|emb|CAM75595.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
          Length = 174

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +   +   S     +    L +    L      ++ I GH D          N  L   R
Sbjct: 68  DRVYYGTDSHSLNADAKATLDRQAAFLRRYPTVMLRIEGHADER---GTREYNLALGDRR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A S  + L+  GV+  R+S  + F   R +   A++   + NRR
Sbjct: 125 AQSVKEYLLAQGVASGRLSTST-FGKERPEANGANEQAWAQNRR 167


>gi|15643441|ref|NP_228485.1| motility protein B [Thermotoga maritima MSB8]
 gi|4981200|gb|AAD35760.1|AE001740_6 motility protein B [Thermotoga maritima MSB8]
          Length = 289

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 34/118 (28%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
              ++       W   Y+D +T+L+ FF+ +  ++       + +             + 
Sbjct: 4   KKREEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGRPPSV 63

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                  N     +  +        +++            +     L++ +F+   S 
Sbjct: 64  LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFEPGSA 121



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267
           +     +  E    G LI + D      F+  S+    E   +L K+G++ + H+T V+ 
Sbjct: 91  EEYKGKITVEERDEGTLIVLKD---MVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLE 147

Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + G+ D  P    +I   NW LS  RA S     +   + E R+ +
Sbjct: 148 VYGYADDRPPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 192


>gi|320539138|ref|ZP_08038809.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
           symbiotica str. Tucson]
 gi|320030776|gb|EFW12784.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
           symbiotica str. Tucson]
          Length = 169

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277
             +  + +  + + NT  F         +   +L      L ++     ++ GH D    
Sbjct: 51  EEQARLQMQELQKENTVYFGLDKYDVSADFAQILDAHATFLRNNASYKVTVEGHADER-- 108

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
                 N  L   RA S    L   GV  D+IS +S +   +  +        + NRR  
Sbjct: 109 -GTPEYNIALGERRANSVKMYLQGKGVLADQISIVS-YGKEKPAVLGHDAAAYAKNRRAV 166

Query: 336 IL 337
           ++
Sbjct: 167 LV 168


>gi|296410000|gb|ADH15776.1| OmpP6 [Haemophilus haemolyticus]
          Length = 137

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 7/108 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 34  LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 90

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332
           L   RA +    L   GV   ++  +S +   +  +      +   NR
Sbjct: 91  LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNR 137


>gi|118591641|ref|ZP_01549037.1| OmpA/MotB [Stappia aggregata IAM 12614]
 gi|118435634|gb|EAV42279.1| OmpA/MotB [Stappia aggregata IAM 12614]
          Length = 222

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
               +FD +S+    +    L ++  +L+          + GHTDA   +  A+ N  LS
Sbjct: 112 DMEILFDYNSASLRHDQAAKLAELSRMLSQEKFKNYRFLLLGHTDA---KGSAQYNLTLS 168

Query: 289 LDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
             RA +    +   G +SE+R+   SG    +LK   DP    NRR+ +++ 
Sbjct: 169 QQRAQTIAGFVTAWGSLSEERVLA-SGMGASKLKDQGDPYGEQNRRVQLVLL 219


>gi|323497326|ref|ZP_08102344.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
 gi|323317409|gb|EGA70402.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
          Length = 203

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S+   P  +  ++++ + +A        ++G+         A  N  LS  RA
Sbjct: 81  HILFANDSAEVQPVFMTQIREVADFMAEFPSTSVELQGYASKV---GRADYNLELSKQRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPM-NSANRRIDILVEDRQG 343
           ++   +L+  GV   R++ I GF    L    +D   ++ NR++   +   +G
Sbjct: 138 FAVEDLLLSYGVDSSRVN-IVGFGDTNLSLEGNDEQVHAQNRKVVASIIGHKG 189


>gi|237751470|ref|ZP_04581950.1| lipoprotein [Helicobacter bilis ATCC 43879]
 gi|229372836|gb|EEO23227.1| lipoprotein [Helicobacter bilis ATCC 43879]
          Length = 170

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288
           D   T  FD        +    ++   + +        + +G+TD          N  L 
Sbjct: 62  DSLTTIYFDFDRYDIRSDMKDYVRANADFIKEKNIKAVVLQGNTDEF---GGDEYNTALG 118

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           L RA S    L+  G+  +  S IS +  H+           + NRR DI+
Sbjct: 119 LKRAISVRDALVLQGLPRNMFSTIS-YGMHKPVCREKTAECYAKNRRTDIV 168


>gi|157959916|ref|YP_001499950.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157844916|gb|ABV85415.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 303

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 8/112 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLS 288
           +R   +F  SSS+        L  +   L     ++ +   GH DA         N  LS
Sbjct: 177 RRLEFLFAPSSSLLNAAHEQDLYAVYRYLQADPSIVEVLVDGHADA---SGDHLANLVLS 233

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            +RA      L++ GVS  ++ +           +++       NRR+ + +
Sbjct: 234 KERADEVVSRLIELGVSP-KMIQTRHHGTRTPVASNNSTQGRELNRRVTLRL 284


>gi|76789924|gb|ABA55070.1| OmpA family protein [Riemerella anatipestifer]
          Length = 384

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD   S    E   V+ +        +   + + GHTD       A  N  LS 
Sbjct: 276 RQFVVYFDFDRSDLTAEARSVVTQAANYAKSGAPTRVLVVGHTDT---SGNAAYNQGLSN 332

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336
            RA +    L+  GV+   +  + G    +   A+        NRR  +DI
Sbjct: 333 RRARTVADALVAQGVNGG-VISLDGKGETQPAKATGDGVREPLNRRATVDI 382


>gi|188534419|ref|YP_001908216.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
           tasmaniensis Et1/99]
 gi|188029461|emb|CAO97338.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
           [Erwinia tasmaniensis Et1/99]
          Length = 172

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L G     +  G +    +  + +  + + N   F         +   +L      L  +
Sbjct: 38  LDGSANGGMNSGNMSSDEQARLQMQELQKNNIVYFGLDKYDIQSDFAQMLDAHATFLRSN 97

Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                ++ GH D          N  L   R+ +    L   GV+ED+IS +S +   +  
Sbjct: 98  PSYKVTVEGHADER---GTPEYNIALGERRSSAVKMYLQGKGVAEDQISIVS-YGKEKPA 153

Query: 322 I--ASDPMNSANRRIDIL 337
           +    +   + NRR  ++
Sbjct: 154 VLGHDESAYAKNRRAVLV 171


>gi|114570965|ref|YP_757645.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
 gi|114341427|gb|ABI66707.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
          Length = 173

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   +         E    L++    LA        + G+ D          N  L   R
Sbjct: 63  DRVFYGLDRHDLSDEARATLRRQAAWLASYPGTRILVAGNCDER---GTREYNLALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332
           A +A   L+  GV   RIS  S +   R     +S+   + NR
Sbjct: 120 ASAARTYLISQGVDPSRISTTS-YGKERPSCSQSSETCWAVNR 161


>gi|111219587|ref|YP_710381.1| lipoprotein [Frankia alni ACN14a]
 gi|111147119|emb|CAJ58764.1| hypothetical protein; putative lipoprotein [Frankia alni ACN14a]
          Length = 168

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 12/163 (7%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A      ++     + +  +    D     V   T       + +      +F   S+
Sbjct: 6   AAAPVPDDEVRAAVHTLRTDDAVRPIDLDRSVVELRTEEHRGAETTLVLSADVLFAFDSA 65

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                    +  +   LA S   I + G+TD+         N  LS  RA +   +L + 
Sbjct: 66  ELTATARRQIADVAGRLAGSAAPIRVDGYTDSF---GTPAYNVILSQRRASAVADLL-RP 121

Query: 303 GVSEDRISKISGFAHHRLKI-------ASDPM-NSANRRIDIL 337
                 +    G               + DP   + NRR+ I 
Sbjct: 122 AAPAGFLVSARGHGSADPIAHDTLPDGSDDPAGRAINRRVTIT 164


>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
 gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
          Length = 318

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 9/117 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283
           ++ +   ++  +FD + +  L E    L      L    +   +  G+TD +        
Sbjct: 201 IVYLETIQSRILFDFAQTDLLLE--HDLDIAITRLTTYKKATVVLTGYTDNT---GKETF 255

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           N +LS  R  S  + L+  GV   +I+++         I +D       NRR+DIL+
Sbjct: 256 NLQLSKQRVQSIKKTLLDRGVQASQITEVY-KGESDPIIGNDSREHRHLNRRVDILL 311


>gi|15602451|ref|NP_245523.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720855|gb|AAK02670.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 272

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD +      +   V+  +   L  S  + + + G TD          N +LS  R
Sbjct: 138 GDFLFDFNKDSLTAKGKEVVDSVATQLKASDAKEVKVAGFTDRL---GSEAYNLKLSQRR 194

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337
           A      L++ GV+ + I  + G+   +   A D +  A        NRR++I 
Sbjct: 195 ADRVKARLIEQGVAAN-IHAV-GYGKAQQVKACDDVQGAALRDCLRPNRRVEIT 246


>gi|300726777|ref|ZP_07060207.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
 gi|299775890|gb|EFI72470.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
          Length = 689

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   ++   +    E+   L ++  +L  +    I +  H D   ++     N
Sbjct: 512 ITAPVLIDNIFYEFDKANLTSESTKALDELVNLLNENPNVTIELSAHCD---YKGSEDYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFA-------------HHRLKIASD--PMN- 328
            +LS  RA S    L+  G+++DR++ + G+               ++    +D      
Sbjct: 569 KQLSQRRAESVVNYLIAKGIAKDRLTPV-GYGKDKPKTIKKKLTEKYKWLKENDVLTEEY 627

Query: 329 -------------SANRRIDILVED 340
                          NRR + +V  
Sbjct: 628 IKKLSKEEQEICNQLNRRTEFIVLR 652


>gi|83647690|ref|YP_436125.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83635733|gb|ABC31700.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 274

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 74/243 (30%), Gaps = 18/243 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           S      + S        +     +  +NN    ++     +       D        K+
Sbjct: 28  SSQNLTPEASPSEDFAVKSAAHNVEVADNNRDVSTSEADELYSYGLSQADDNPEITTSKA 87

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            +   +     +     ++            L  +    ++           +    E  
Sbjct: 88  AETINAAGTPTDSTTTEVTSASTTEGNDMTVL--VLDDATAAALEKEYGGANQFAGVEPP 145

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN 279
           +  ++           +    S    E +  L++  + L+        I GHTDA     
Sbjct: 146 QPRVI----------FYPLEKSNLNQEDMAALKQHADFLSVHPNYQIQIHGHTDA---SG 192

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            A  N RLS +RA      L+ +G   +++ ++ G+      +     +  NRR++++  
Sbjct: 193 QATYNERLSEERALRVADYLLNNGARPEQV-EVFGWGSREPLLT-SSHHEKNRRVELIYL 250

Query: 340 DRQ 342
           + Q
Sbjct: 251 NDQ 253


>gi|313206073|ref|YP_004045250.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312445389|gb|ADQ81744.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
 gi|325336486|gb|ADZ12760.1| OmpA2 [Riemerella anatipestifer RA-GD]
          Length = 473

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            +        F  +S +  P++   L     ++          + G TD       A  N
Sbjct: 355 EVNKNFEGIEFALNSDVIRPQSFGKLDNAANIIKGMNTSKQYLVIGATDTR---GSASYN 411

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334
            +LS  RA +  + L+  GVS   +    G     LK           +  N ANRR+
Sbjct: 412 KKLSQRRADAVVKYLVNKGVSTS-MLVAEGRGQEDLKYPECNPATKCPEWKNEANRRV 468


>gi|229591316|ref|YP_002873435.1| putative phosphate-related ABC transporter exported protein
           [Pseudomonas fluorescens SBW25]
 gi|229363182|emb|CAY50235.1| putative phosphate-related ABC transport system, exported protein
           [Pseudomonas fluorescens SBW25]
          Length = 443

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 89/299 (29%), Gaps = 20/299 (6%)

Query: 54  INATDDDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +N  + +    +       +   G           D+Q+    + ++ +     + +  +
Sbjct: 150 LNTLNTEQLAQLFNGEISTWETVGGVGGPIHVYARDDQSGTYDTFKDLVLRLRGKPLVPS 209

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD-----LCKSTDLE 164
           +   +          Q  +   F      +       +  DS+           +   L 
Sbjct: 210 AKRFESSEQLSDAVSQDPQGIGFIGLPYVRQAKAVAIVDGDSQPMLPLNSLIATEDYPLS 269

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           + +             + ++   +  + Q +          + A ++            I
Sbjct: 270 RRLFFYLPPSGHNPWAKALVDFTQSSKGQAIVAASGFIAQQVQAMDVEPRASMPEGYQTI 329

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA 281
                       F++ S+    +    LQ++   +    +    +++ G  DA      A
Sbjct: 330 AREAQRLTVNFRFEEGSASLDNKARQDLQRVVAYIKSHDKLDKQVTLVGFGDAKNDPQRA 389

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
                LS  RA +  + L+KSGV    + +I GF       A+        NRR+++ V
Sbjct: 390 AL---LSKLRAMAVRRELVKSGVV---LREIRGFGAQMPVAANTADEGRIKNRRVEVWV 442


>gi|149198155|ref|ZP_01875202.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
 gi|149138757|gb|EDM27163.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
          Length = 199

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I    +   F  +S+      +  L+ + + +A + +  + I GHTD    +   + N  
Sbjct: 85  IHHNFSPVYFGFNSASIDKSNLRPLKILAKYIADNKDFHLVISGHTDE---KGSEQYNRI 141

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI--DIL 337
           LS  RA +  + L+     +++I  I G    +     D    ++ NRR   +I+
Sbjct: 142 LSEKRALAVREKLISFYDIKNKIHTI-GMGEEQPASLGDSIKDHAKNRRAQFEII 195


>gi|72162680|ref|YP_290337.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Thermobifida fusca YX]
 gi|71916412|gb|AAZ56314.1| similar to Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Thermobifida
           fusca YX]
          Length = 356

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 74/258 (28%), Gaps = 21/258 (8%)

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
           + +  +P    +       ID    K  + LK+                     S     
Sbjct: 114 LAEFGDPNAEPTTPNGVSLIDMQNNKRHMPLKLTDGKTCHCSDWSGQKDLSPGESIDIWA 173

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
              +   D E    +   T     I   E     P      +A  R          I  +
Sbjct: 174 AYPAPPEDVELMTVMTPVTPDFLDIPITEAASPDPDIVNTPVAEPRILDFWAFQDDIDGS 233

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AH 261
            S     +    +L                +  +FD + S         L+ + E + A 
Sbjct: 234 SSRSETGDTTSIML---------------SSDVLFDLNESTLTDAADETLRAVAEEIDAS 278

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
           ST  + I GHTD +        N  LSLDRA +  + L +    +    +++G       
Sbjct: 279 STTTVKIDGHTDNT---GNDAINNPLSLDRAKAVEKRLKELITRDGITFEVAGHGSADPV 335

Query: 322 IASDPM--NSANRRIDIL 337
             +      + NRR+ I 
Sbjct: 336 ADNGTEEGRAKNRRVTIT 353


>gi|167950041|ref|ZP_02537115.1| flagellar motor protein MotB [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 76

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +W   +AD M++LM FF+++      D    K + +           
Sbjct: 7  PAWLATFADLMSLLMCFFVLLLSFATIDAVRFKKMAESMKDAFGVQRE 54


>gi|226227347|ref|YP_002761453.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
           aurantiaca T-27]
 gi|226090538|dbj|BAH38983.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
           aurantiaca T-27]
          Length = 185

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+  +     E    L     +L  +    I I GH D          N  L   R
Sbjct: 70  ETIYFEYDADELRDEARASLDAKLAILNANPGLRIRIAGHCDER---GSDEYNIALGRRR 126

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           + +A + L   GV   RI   S F   R  ++       S NRR +  +
Sbjct: 127 SEAAKRYLTDRGVDASRIET-SSFGRERPAVSGTSEESWSKNRRDEFEI 174


>gi|330752332|emb|CBL87286.1| protein with similarity to outer membrane OmpA family protein
           [uncultured Flavobacteria bacterium]
          Length = 292

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIAR 282
           + + ++ Q     F  +++  LP++I  L+++ + L  H    + +RGH +         
Sbjct: 173 VEVGMVYQLKEIFFIPATAQYLPKSIKELERLKQFLLNHEVLKVQVRGHVNGPAQTKPEF 232

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVE 339
               LS  RA +  Q L+ +GV E+R+ +  G ++ +++ +   +      NRR++I++ 
Sbjct: 233 Y-QELSDARAKAIKQFLVGNGVGEERVDE-KGMSNFQMRYSSPKTAFEAGENRRVEIIIT 290

Query: 340 D 340
            
Sbjct: 291 A 291


>gi|301167893|emb|CBW27478.1| putative sodium-driven polar flagellar protein [Bacteriovorax
           marinus SJ]
          Length = 288

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 95/274 (34%), Gaps = 18/274 (6%)

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
             G    Q    +  +    L        + V L +        + + E   +  +    
Sbjct: 9   GGGEESPQAEETKCPECPPGLPGWMATFSDLVTLLLTFFVLLLSFAKTETAKYEAALGSI 68

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKK 198
            +    ++ +  E  +      D    I+ +E     P+    +  +  K  +  +  ++
Sbjct: 69  RDAFGGNVLKHGEVIQRGKSPDDSPTMIDSQEPVRPFPIDFLTMEGILDKHEINRESDEE 128

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE--TIVVLQKIG 256
           + +  + L   N+   V       GI + + D+    +F   S     E  +I V  ++ 
Sbjct: 129 LKTMKNDLYEYNLSDSVNIYEMPEGIKVKVKDK---ILFRYGSLRIANEQVSIEVYTRLV 185

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNW---RLSLDRAYSAYQVLMKSGVSEDRISKIS 313
            +L +    + ++G++           N     LS  RA +  + L++ GV  D+IS + 
Sbjct: 186 RLLTNKDWSVFVQGYSSRGEVSTEDGKNMDAFELSAARASAVTRSLIRRGVKPDQISTVF 245

Query: 314 GFAHHRLKIASDPMNSA------NRRIDILVEDR 341
            +   R    + P  S       +RR+D ++  R
Sbjct: 246 -YGDIRP--ENIPGRSQTEIERASRRVDFILRKR 276


>gi|261252913|ref|ZP_05945486.1| outer membrane protein [Vibrio orientalis CIP 102891]
 gi|260936304|gb|EEX92293.1| outer membrane protein [Vibrio orientalis CIP 102891]
          Length = 203

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-----VLFETTRTGILISII 229
           + PL  E     K   +   +   +     G++    +          +    G  I   
Sbjct: 16  VAPLKAEDAYEYKETPKPNQVDDLLDEDKDGVINARDLCPQTPAKADIDNDGCGTYIKTE 75

Query: 230 DQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRL 287
           ++ +   +F   SSI  P  +  ++++ E L       I ++G+         A  N +L
Sbjct: 76  EEMDLHILFQNDSSIIQPMFLAQIREMSEFLEAYPSTSIELQGYASKV---GKAEYNQKL 132

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRI 334
           S  RA +    L+ +GVS  R+ +I GF   RL      +  ++ NR++
Sbjct: 133 SERRAEAVEAALLDNGVSSSRV-RIVGFGDTRLDELGDDEVSHAMNRKV 180


>gi|167586272|ref|ZP_02378660.1| peptidoglycan-associated lipoprotein [Burkholderia ubonensis Bu]
          Length = 169

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 67  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            + +   GV++ ++  +S     + + A   +   + NRR D++
Sbjct: 124 RRAMALLGVADSQMEAVS-LGKEKPQAAGHDEASWAQNRRSDLV 166


>gi|107100492|ref|ZP_01364410.1| hypothetical protein PaerPA_01001517 [Pseudomonas aeruginosa PACS2]
          Length = 281

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             T        + P E++S +       +     +          +          F   
Sbjct: 9   FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 68

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              +    K +  +          +   E        +     S  K        + +  
Sbjct: 69  EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 128

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + + +    L           E     +++          F+      L    +     
Sbjct: 129 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 185

Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
              +A       I + GHTD++        N +LS +RA S   +   SG+  D++ ++ 
Sbjct: 186 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 241

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G      +  +      + NRR+++L   R
Sbjct: 242 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 271


>gi|302558689|ref|ZP_07311031.1| secreted protein [Streptomyces griseoflavus Tu4000]
 gi|302476307|gb|EFL39400.1| secreted protein [Streptomyces griseoflavus Tu4000]
          Length = 215

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 60/205 (29%), Gaps = 10/205 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
               + +L   +              +   +     P         ++      DL    
Sbjct: 8   PAPPRLALVLSAATVMVAANLYGAVVAHADDGPGVPPGTEASASAPVEVDPNDPDLKLPE 67

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIVVLQKI 255
            +TL+     +I + V  ++       +  D     +   +F K S+    E    +  I
Sbjct: 68  GATLTEPKVLDIKQIVEDKSGDERREDTNSDVTFALQAEVLFGKDSAKLGAEAKARIATI 127

Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
              +   +   + + G TD       +     LS  RA +   VL +     +   ++ G
Sbjct: 128 AGEIKTQNATKVRVFGFTDNL---GSSAHGDVLSRQRANAVQAVLGRELSDANITYEVRG 184

Query: 315 FAHHRLKIASDPMNSA--NRRIDIL 337
           +        +        NRR++I 
Sbjct: 185 YGEQYPIADNSTEAGRKKNRRVEIT 209


>gi|116048976|ref|YP_792222.1| hypothetical protein PA14_50810 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390590|ref|ZP_06880065.1| hypothetical protein PaerPAb_20651 [Pseudomonas aeruginosa PAb1]
 gi|115584197|gb|ABJ10212.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 293

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135
             T        + P E++S +       +     +          +          F   
Sbjct: 21  FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
              +    K +  +          +   E        +     S  K        + +  
Sbjct: 81  EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + + +    L           E     +++          F+      L    +     
Sbjct: 141 KEWLDTHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 197

Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
              +A       I + GHTD++        N +LS +RA S   +   SG+  D++ ++ 
Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253

Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341
           G      +  +      + NRR+++L   R
Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283


>gi|260905077|ref|ZP_05913399.1| flagellar motor protein [Brevibacterium linens BL2]
          Length = 228

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 28/189 (14%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                   +     ++ ++         S L  +  D   +G+    ++ G +ISI +  
Sbjct: 21  QAQKDFQAQTDDLSEQIEKSSKAENIRKSMLDEIQKDLESEGIEVIVSQNGSVISIPNDL 80

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIARD 283
               FD  S     +       IG ++A            + + + GHTD + ++ +   
Sbjct: 81  LG--FDSGSYDIKEKYEAKSLTIGTIIAREIEEHDGEEFLDTVFVEGHTDNAKYQGLEGT 138

Query: 284 -NWRLSLDRAYSAYQVLMKSGVSEDR------------ISKISGFAHHRLKIASDP---M 327
            NW LS  RA S ++ L +  +  D+            +  +SG++  R   A+      
Sbjct: 139 GNWGLSTFRAISLWK-LWEEELPSDQQLETMQGPEGQPLFSVSGYSDTRPVNANQSTDLG 197

Query: 328 NSANRRIDI 336
            +ANRRIDI
Sbjct: 198 AAANRRIDI 206


>gi|50120313|ref|YP_049480.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610839|emb|CAG74284.1| peptidoglycan-associated lipoprotein precursor [Pectobacterium
           atrosepticum SCRI1043]
          Length = 169

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F         E   +L      L  +     +I GH D         
Sbjct: 56  LQMQELQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 112

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 113 YNIALGERRANAVQMYLQGKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 168


>gi|294631150|ref|ZP_06709710.1| secreted protein [Streptomyces sp. e14]
 gi|292834483|gb|EFF92832.1| secreted protein [Streptomyces sp. e14]
          Length = 215

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 60/210 (28%), Gaps = 10/210 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + +      + +L   +       +      +         P         ++      D
Sbjct: 3   AATMTHTRPRLTLALTAATVMVAAQLYGAAAARADGGPSEPPGTEASASAPVQVDPNDPD 62

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIV 250
           L     +TL+     +I   V  +        +  D     +   +F K S+    +   
Sbjct: 63  LKLPEGATLAAPKVLDIKSVVEDQGGEERREDTNTDVTFALQAEVLFPKDSAKLSDQAKS 122

Query: 251 VLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +  I + +       + + G TD             LS  RA +   VL +     D  
Sbjct: 123 RIDAIAQEIKKQHATQVRVFGFTDNL---GSHEHGVVLSKQRANAVQDVLSQELNDPDIT 179

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             + G+A       +   +    NRR+++ 
Sbjct: 180 FDVRGYAEDYPIADNSTEDGRKKNRRVEVT 209


>gi|260768773|ref|ZP_05877707.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           furnissii CIP 102972]
 gi|260616803|gb|EEX41988.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           furnissii CIP 102972]
          Length = 254

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV--LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L+ I E+       + + I GH+D+         N  +S  RA  
Sbjct: 150 FQSGVLALTQNQRSQLEAISELVLFDPKIKTVRITGHSDS---HGDTVVNLSVSRRRADD 206

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
               +M +GV  + + +I G         +        NRR++I +  R
Sbjct: 207 VAYWMMMAGVPTE-MMEIRGQGGRYPVANNATEEGRLANRRVEIELVRR 254


>gi|304397573|ref|ZP_07379450.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
 gi|304354745|gb|EFM19115.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
          Length = 405

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + L DL ++++  ++    +     V      + ++I         +F +  ++  P   
Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +L ++   +      I +   TD  P   +    ++  S  RA +  Q+L    +++  
Sbjct: 301 ALLARVSNAMKDVKGTILVSVFTDDHPVDNSRFASSYEFSFARARTITQLLQVQ-LNDGH 359

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             +  G       + +D     + NRR++I +
Sbjct: 360 TVRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391


>gi|224531999|ref|ZP_03672631.1| outer membrane protein [Borrelia valaisiana VS116]
 gi|224511464|gb|EEF81870.1| outer membrane protein [Borrelia valaisiana VS116]
          Length = 389

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   + +  +K +  E    GI +S   +     F   S   L +    L  I
Sbjct: 250 DNFIETEVEHYLQEKQIKSINVEKNNKGINLSFDIE-----FYPDSFQILQKEYKKLDII 304

Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            E+L       + I GHT+      +  +   LS  RA +    L+K  V         G
Sbjct: 305 AELLEKFKKNNLLIEGHTEHF---GLEEEMHELSEKRARAIGNYLIKMRVKNKDQILFKG 361

Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340
           +   + K   S P+ + NRR++I + +
Sbjct: 362 WGSKKPKYPKSSPLKAKNRRVEITILN 388


>gi|225159124|ref|ZP_03725430.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
 gi|224802279|gb|EEG20545.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
          Length = 199

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 38/113 (33%), Gaps = 6/113 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285
            I D   +  F    S    E    +Q     L    +   +  G  D       A  N 
Sbjct: 88  QIRDAVQSVYFAFDQSAVRQEERAKIQDAQNYLNAHPDQRVLLEGRCDWR---GTAEYNL 144

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDIL 337
            L   RA S  Q L   G++ +RI +I           +D    + +RR+D +
Sbjct: 145 GLGDRRANSVRQYLQDLGIAANRI-EILSKGDLEAVENADAATAAKDRRVDFV 196


>gi|227327557|ref|ZP_03831581.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
 gi|253687644|ref|YP_003016834.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|261822329|ref|YP_003260435.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
           wasabiae WPP163]
 gi|251754222|gb|ACT12298.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|261606342|gb|ACX88828.1| peptidoglycan-associated lipoprotein [Pectobacterium wasabiae
           WPP163]
          Length = 169

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282
           + +  + + N   F         E   +L      L  +     +I GH D         
Sbjct: 56  LQMQELQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 112

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            N  L   RA +    L   GVS D+IS +S +   +  +        + NRR  ++
Sbjct: 113 YNIALGERRANAVQMYLQGKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 168


>gi|312891928|ref|ZP_07751431.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311295559|gb|EFQ72725.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 571

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D   S   P+    L K+  VL       I +    D+         N  LS  RA +A
Sbjct: 461 YDLDKSFIRPDAAAELDKLSVVLKEHPALKIELSSFADSR---ASYSYNLALSRRRATAA 517

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338
              L+  GVS  R+   +G+    L          S+  +  NRR +  +
Sbjct: 518 VNYLVNKGVSISRVLA-NGYGKTHLVNQCADHVKCSEAEHQLNRRTEFKL 566


>gi|27377528|ref|NP_769057.1| hypothetical protein bll2417 [Bradyrhizobium japonicum USDA 110]
 gi|27350672|dbj|BAC47682.1| bll2417 [Bradyrhizobium japonicum USDA 110]
          Length = 213

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     +    +                             +  +  K    L  +  + 
Sbjct: 17  AALSMTAGLALAGDNNISSDKILDALKPKPVTRGLSAGPQADPAVQAKEATFLNTVRNRS 76

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           + +LS    + I + +     +  + I          FD +S+     ++  +Q +G+ L
Sbjct: 77  TRSLSTGEREQIAE-LAATKPKIDLEIQ---------FDYNSADIAKTSVPSVQALGKAL 126

Query: 260 AH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315
           +          + GHTDA         N  LS  RA +  + L+++ G++   +  + G+
Sbjct: 127 SDPALKGSTFVVAGHTDAI---GGEEYNQGLSERRADTIKKYLVQNYGLNGTDLVTV-GY 182

Query: 316 AHHRLKIASDPMNSANRRIDIL 337
              +LK  ++  +  NRR+ ++
Sbjct: 183 GKTKLKDTANGADPINRRVQVV 204


>gi|315126277|ref|YP_004068280.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
 gi|315014791|gb|ADT68129.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
          Length = 179

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     FD   +    +   +L+   E L  +  V   I GH D          N  L  
Sbjct: 73  QEQIIYFDFDKATVESKYADLLRAHAEFLVKNPSVKVLIEGHADER---GTPEYNIALGE 129

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R  +  + L   GVS  ++  +  +   +  + +      + NRR  ++
Sbjct: 130 HRGQAVEKYLQSLGVSASQM-SVVSYGEEKPMVKTRTEAAFAKNRRAVLV 178


>gi|254248380|ref|ZP_04941700.1| Outer membrane protein [Burkholderia cenocepacia PC184]
 gi|124874881|gb|EAY64871.1| Outer membrane protein [Burkholderia cenocepacia PC184]
          Length = 187

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   +LQ   + L         I+G+TD       +  N  L   R+ + 
Sbjct: 86  FDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDER---GTSEYNLALGQRRSQAV 142

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337
              L   GV   ++  +S     +         +   NRR D++
Sbjct: 143 ASTLETLGVPATQLEAVS-LGKEKPVALGHDEEAWTQNRRADLV 185


>gi|229523201|ref|ZP_04412608.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
           11079-80]
 gi|229339564|gb|EEO04579.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
           11079-80]
          Length = 294

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 19/298 (6%)

Query: 51  MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++ I+        A+  +Y     ++    +     E                     K 
Sbjct: 9   LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           ++D ++         + +                + +  +  ++             +++
Sbjct: 69  NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
            E    P  S +   +  ++  +      +SS L           +      +   IS  
Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYSEFSDCISKLLPYSFEDISFT 183

Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286
                  +D+  S      +   L +I E + ++ ++  +    +TD++   N +     
Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           LS  RA    +     G+ EDRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIDDNASPIGKDKNRRVVISLGRTQ 293


>gi|208435023|ref|YP_002266689.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           G27]
 gi|208432952|gb|ACI27823.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           G27]
          Length = 179

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 6/117 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +  
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKLMK 179


>gi|148253708|ref|YP_001238293.1| hypothetical protein BBta_2207 [Bradyrhizobium sp. BTAi1]
 gi|146405881|gb|ABQ34387.1| putative outer membrane protein of unknown function [Bradyrhizobium
           sp. BTAi1]
          Length = 216

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P +  +I A  + K+   +    +     L      +      T+  I + I        
Sbjct: 54  PQAAPQIDATAQAKQSTFIDSMRNRKTRSLSLGEREQLAEIAATKPKIDLEIQ------- 106

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           FD +S+     +I  +Q++G+ L+          + GHTD          N  LS  RA 
Sbjct: 107 FDYNSAAISKTSIQAVQELGKALSDPNLKGSTFMVAGHTDGI---GSDGFNQDLSERRAD 163

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L++  G++   +  + G+   +LK A++P +  NRR+ ++
Sbjct: 164 TLKRYLVEKFGLAGQDLVTV-GYGKTKLKDAANPADPVNRRVQVV 207


>gi|310818068|ref|YP_003950426.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
 gi|309391140|gb|ADO68599.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
          Length = 284

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 14/213 (6%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +  +Q  +   +   + +  +   +         ++    LP   ++      +  R + 
Sbjct: 47  AQLEQEANESEARVAELQALRVSMERRLRVLEQQQQGATSLPGDLRKARELGTQMVRRET 106

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
               +++ L   +           T    +           +F+   S   P    VL +
Sbjct: 107 ARLNLTAKLKEELTRGDAWLDAIGTEALRLE-----LSERLLFEPGQSNLTPRGTEVLAR 161

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARD---NWRLSLDRAYSAYQVLMK--SGVSEDR 308
            G VLA        +  HTD  P    A     +W LS  RA +  + L +  + ++++R
Sbjct: 162 AGAVLAAVEGHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQER 221

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +S  +G A  R  + SD       NRR+ +++ 
Sbjct: 222 LSA-TGHASFRPVVPSDSPVNRLRNRRVTLMLR 253


>gi|77462481|ref|YP_351985.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
           2.4.1]
 gi|77386899|gb|ABA78084.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
           2.4.1]
          Length = 701

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           + GS    + +                       +    +   +         I+  E+Y
Sbjct: 462 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 521

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230
               +S+    A           + +   L      ++ +       R    +  +    
Sbjct: 522 QAVDVSRLPEPAPVYSFVQTRDQRDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 581

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             +   FD  S+   P+    L  +G+ +A        EV  I GHTDA      A  N 
Sbjct: 582 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 638

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LS  RA S    L +   V  + +  + G+    L++ SD     NRR+ + +
Sbjct: 639 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691


>gi|126461359|ref|YP_001042473.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103023|gb|ABN75701.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 701

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           + GS    + +                       +    +   +         I+  E+Y
Sbjct: 462 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 521

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230
               +S+    A           + +   L      ++ +       R    +  +    
Sbjct: 522 QAVDVSRLPEPAPVYSFVQTRDERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 581

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             +   FD  S+   P+    L  +G+ +A        EV  I GHTDA      A  N 
Sbjct: 582 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 638

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LS  RA S    L +   V  + +  + G+    L++ SD     NRR+ + +
Sbjct: 639 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691


>gi|259416355|ref|ZP_05740275.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
           TrichCH4B]
 gi|259347794|gb|EEW59571.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
           TrichCH4B]
          Length = 624

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 10/259 (3%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
             ++   E+  Q ++  + D  + +   ++K            +         + ++   
Sbjct: 359 SGDRAVVEQDGQYRVIKNDDALLRQPGSNVKTYQFKDGSTRTVVTREDGIEVETIRAADG 418

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           +      +          D  +   K     LP  S  +           +      +  
Sbjct: 419 RVLRRSKTLTDGRTVVLFDDTQEAEKVVVTELPKASPNRRAFSTDGSISAEDLAAALAAQ 478

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D                +      +   F+  SS+  PE    L  +G  L    
Sbjct: 479 QPEGIDRRFSLAQVRNIDAVRRLVPEINVDKVTFETGSSVIRPEQAEELTDLGNALRQMV 538

Query: 264 EV-----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
           +        I GHTDA      A  N  LS  RA +    L +   V  + +  I G+  
Sbjct: 539 DTNPTEVFLIEGHTDAV---GAATYNLALSDRRAETVALALTEYFDVPPENMV-IQGYGE 594

Query: 318 HRLKIASDPMNSANRRIDI 336
             L +       ANRR+ +
Sbjct: 595 SDLAVPVLDAERANRRVTV 613


>gi|171319575|ref|ZP_02908672.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
 gi|171095186|gb|EDT40181.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
          Length = 133

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   +LQ   + L +       I+G+TD       +  N  L   R+ + 
Sbjct: 32  FDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQRRSQAV 88

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
              L   GV   ++  +S     +       +   + NRR D++
Sbjct: 89  MSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 131


>gi|83644283|ref|YP_432718.1| outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
 gi|83632326|gb|ABC28293.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Hahella chejuensis KCTC 2396]
          Length = 169

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P     LQ+    +   +   + + GH D +     A  N +LS DRA S 
Sbjct: 64  FAFDSSKIGPGEQSDLQQWASYIQEGAYNRVEVHGHADDT---GSADYNRKLSADRANST 120

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            Q L    VS      +      +    +        NRR++I+
Sbjct: 121 VQALRNL-VSGQVDFVVVPHGEEQPLAENSDEQGRQLNRRVEIV 163


>gi|295097172|emb|CBK86262.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 146

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +FDK+ +   PE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 38  DKILFDKNDARLRPESETQIQTMASRLAATGLNHARMDGHTDNY---GEESYNEALSLKR 94

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           A        K + +    ++   G        ++      + NRR+ +++
Sbjct: 95  ANVVADAWAKGANIPRSNLTT-RGLGKKYPISSNRTAQGRAENRRVAVVI 143


>gi|239906204|ref|YP_002952943.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
 gi|239796068|dbj|BAH75057.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
          Length = 250

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
             +  SWK+ YADF+T +MAFFL+MWIIN     T K +EQYF    K    A
Sbjct: 19 PKAHGSSWKVAYADFVTAMMAFFLLMWIINMVPPATLKQLEQYFKDEPKPAQGA 72



 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 10/185 (5%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D  K              +      +       +A +    ++         G+  +  
Sbjct: 63  KDEPKPAQGALFSPDATERQRAAALNRDDAMRYTIAMRFKKIITEDPFLKNSSGISSDDV 122

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA-SPFRN 279
              + +      N  +F   S+    +   ++ ++ +V+      + IRGH DA    + 
Sbjct: 123 GVLLRLQ-----NGMLFAPGSAELTEQAKKLMAEVVDVMKTYNVFLIIRGHADAAEAAKG 177

Query: 280 IARDNWRLSL-DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
               NW LS    A +A  V+   G+   R+  ++ +   R  +   +    +ANRR++ 
Sbjct: 178 HFASNWELSGARAAAAARAVIAGGGIQASRVRAVA-YGDSRPLMPETNPEAAAANRRVEF 236

Query: 337 LVEDR 341
                
Sbjct: 237 YFHRP 241


>gi|149186172|ref|ZP_01864486.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
 gi|148830203|gb|EDL48640.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
          Length = 245

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F ++S+  LP + ++L ++   L   +  +I+I GHT+          N  LS+DRA   
Sbjct: 130 FQEASAALLPASRILLDEVAAALEPCSGAIIAITGHTNK---SGSEAANLALSMDRARVV 186

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            + L++ G+    + +  G           P + ANRRI+  V  
Sbjct: 187 REALVRRGIPRSSL-RARGMGSSEPAERLKPEDPANRRIEFSVIR 230


>gi|311745704|ref|ZP_07719489.1| putative OmpA family protein [Algoriphagus sp. PR1]
 gi|126575146|gb|EAZ79496.1| putative OmpA family protein [Algoriphagus sp. PR1]
          Length = 430

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I +      +   SS PL  +      +   L  +  V   I+G+ D          N +
Sbjct: 321 INEGYVNVYYAFDSSKPLAYSASAADYVANFLKKNPGVSVEIKGYADEL---GSEDYNIQ 377

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVE 339
           LS  RA + Y +L+ +G+   R+    G+        +S       RR+   V+
Sbjct: 378 LSEKRAKAVYDLLIATGIDASRL-SFKGYGEDTSVDKSSADARQMARRVSFEVK 430


>gi|221134181|ref|ZP_03560486.1| hypothetical protein GHTCC_04568 [Glaciecola sp. HTCC2999]
          Length = 303

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 21/183 (11%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           ++  L K         +   ++E+    +  + +      IS        D     +L  
Sbjct: 126 ETCQLPKLAQHNVEIEIDTTAQEESAQEEVVETIIKEETVISEPARNQEDDFAQILLLLN 185

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
                             F  +SS    + +  L +  +++ +  +    + G TD    
Sbjct: 186 ADNQ--------------FATNSSEVNLKYVARLAQAVQIIQYYPQLQFHVVGSTDEL-- 229

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
                +N  L   RA    + L   G+S DRI  +            D  +    NRR++
Sbjct: 230 -GNTENNMALGQARADGVARYLEAFGISMDRI-SVMTNGEANPLFPGDAPHIRLTNRRVN 287

Query: 336 ILV 338
           I +
Sbjct: 288 ITL 290


>gi|313191694|emb|CBW30515.1| putative outer membrane protein A [Bordetella petrii]
 gi|313191698|emb|CBW30516.1| putative outer membrane protein A [Bordetella petrii]
 gi|313191702|emb|CBW30517.1| putative outer membrane protein A [Bordetella petrii]
          Length = 164

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +  +       I  GHTD+         N +LS  RA S
Sbjct: 87  FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 143

Query: 295 AYQVLMKSGVSEDRISKISGFA 316
               L+  GV  +RI    G  
Sbjct: 144 VKSYLVSKGVDPNRIYT-EGKG 164


>gi|312116152|ref|YP_004013748.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311221281|gb|ADP72649.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 568

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 13/211 (6%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             + +    +++   +           +       + +    +  +  L+  +       
Sbjct: 364 PSYSVKEGVETQVSSHVTELPVVSRLLVLPEQRKVEELQGAVSAIMDKLAAIEARIEAGN 423

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE-T 248
             L DL  +++     L   +       +             RN   F   +    P+  
Sbjct: 424 ASLADLKARVAEQGETLKTVSAQVFSPQQRFTEWAR------RNAIFFGDGTKFRNPDIA 477

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
              + ++  ++A+S   + + G TD+      +  N +L  +RA +    L+K GV+EDR
Sbjct: 478 SRKIAELAAIVANSDIRLLVVGFTDSL---GQSERNQQLGQERAKAVVDELVKLGVAEDR 534

Query: 309 ISKISGFAHHRLKIASDPMN-SANRRIDILV 338
           ++ +S        I ++    S NRR++  +
Sbjct: 535 LATVSRRTET--VITTETGATSNNRRVEFQL 563


>gi|146337406|ref|YP_001202454.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278]
 gi|146190212|emb|CAL74204.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278]
          Length = 337

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270
               + +   +      NT  FD  S    P+ +  LQ I + L         EV  I G
Sbjct: 190 EVRYSPSVRQLMPSIDLNTITFDTGSWEIAPDQVAKLQVIADGLNQAIQRNPREVYLIEG 249

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329
           HTDA        DN  LS  RA S   +L +  GV  + ++   G+    LK  +   + 
Sbjct: 250 HTDAV---GNETDNLSLSDRRAESVATLLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSR 305

Query: 330 ANRRIDI 336
            NRR+ +
Sbjct: 306 INRRVTV 312


>gi|148259380|ref|YP_001233507.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|326402601|ref|YP_004282682.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
 gi|146401061|gb|ABQ29588.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
 gi|325049462|dbj|BAJ79800.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
          Length = 167

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
           + D  +   F  + S         L +    LA    V   I G+ D          N  
Sbjct: 49  VADVGDRAFFGFNKSNLTGADKATLDRQASWLAKYPNVDVLIAGNADPR---GTEAYNLA 105

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343
           L   RA++A   L+  GV+  RI  +S +    L    +     + +R   + +   QG
Sbjct: 106 LGARRAHAARDYLVAKGVAASRIQTVS-YGKSCLVSPGNTEQDYAQDR---VAITSVQG 160


>gi|118591825|ref|ZP_01549220.1| possible OmpA family member [Stappia aggregata IAM 12614]
 gi|118435468|gb|EAV42114.1| possible OmpA family member [Stappia aggregata IAM 12614]
          Length = 628

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-----SIRGHTDASPFRNIARDNW 285
             +T  FD  S++     +  L+ I        E        I GHTDA         N 
Sbjct: 510 DLDTITFDTGSAVVRQSQVPQLEDIARASQAVIEQDPTTVLLIEGHTDAV---GSDVSNL 566

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA +  ++L    GV+ + +  + G+    LK+ +      NRR+ I
Sbjct: 567 ALSDRRAETVARILADVYGVAPENMV-VQGYGEDYLKVDTQGAEERNRRVTI 617


>gi|301156335|emb|CBW15806.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 285

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 16/116 (13%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD       P    V+  +   L  +  + + + G+TD          N  LS  R
Sbjct: 148 GDFLFDFDKDTLTPRGKEVVDNVAAQLKETGAKEVKVAGYTDRL---GSDAYNLDLSQRR 204

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAH-HRLKIAS----DPMNSA-----NRRIDIL 337
           A      L++ GV+ +      G+    ++K  +               NRR++I 
Sbjct: 205 ANRVKARLIEDGVTSE--ITAVGYGKVPQVKACNGYKHASKAEKDCLRPNRRVEIT 258


>gi|149915595|ref|ZP_01904121.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
 gi|149810487|gb|EDM70330.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
          Length = 340

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S         L  +   L         + GHTD+         N  LS  RA + 
Sbjct: 235 FETGRSALGQGPFASLAALAAFLTEDDGRRVALVGHTDSV---GALEPNIDLSRARATAV 291

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342
              L+ K GV  +++    G  +     ++  D    ANRR++ ++ + +
Sbjct: 292 MTRLIDKYGVRPEQLEA-RGVGYLAPIASNRTDTGRDANRRVEAVLLNTE 340


>gi|330878862|gb|EGH13011.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 320

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 11/212 (5%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
             ++   S  +   K          K    +   +   + +  +      K+        
Sbjct: 19  PWYWPFGSNDNAQAKPDAVASKSADKPAAPAMVAKSETDTKWWWPFGAEGKKDEPKALPM 78

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248
              +     +      L A         E     + I+         F+      L P T
Sbjct: 79  PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135

Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +  + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +
Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192

Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           R+S+  G      + A+D     + NRR++IL
Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223


>gi|317009738|gb|ADU80318.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           India7]
          Length = 179

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177


>gi|207092711|ref|ZP_03240498.1| peptidoglycan associated lipoprotein precursor (omp18)
           [Helicobacter pylori HPKX_438_AG0C1]
          Length = 167

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 55  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 111

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 112 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 165


>gi|305667116|ref|YP_003863403.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
 gi|88708050|gb|EAR00288.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
          Length = 366

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 18/267 (6%)

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
           I      P   +           +   + D   G+ +  + +        + +   Q   
Sbjct: 104 ISAASFRPSSETVEIKPAYAQWELGAPAPDCASGNPDDCRYWCYKGYPAEFTTLDTQVLG 163

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE--KILAMKRKKRLQDLAKKIS 200
              S+ +     K+   +  +     +     +P    E  K +  K    +++    ++
Sbjct: 164 ADASVAKTPIGSKNASYTKRVLLEPTRVIEEVIPAQYDEITKTVLDKDAYTVEETVPAVT 223

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVL 259
            T++  V         +      ++       N  +    S+        ++      VL
Sbjct: 224 KTVTKEVLKEKGGLTTWNEVECSLVEYQALPINWNL---GSATLTSSAKNIIDTRLMPVL 280

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
             +  V   I  HTD          N  LS  RA +    L+  GV+   +   +G+  +
Sbjct: 281 QQNPGVKLEIASHTDVRGNSG---SNQDLSERRAKAVADYLITKGVNSSLLVA-NGYGEN 336

Query: 319 RLKIA-------SDPMNSANRRIDILV 338
           ++K         ++  ++ NRR +  +
Sbjct: 337 KVKNRCKEGVSCTEREHAVNRRTEFRL 363


>gi|50235073|gb|AAT70739.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGAFKGIFFNFNKASIRCESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  +V+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAQVIQSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|260769131|ref|ZP_05878064.1| outer membrane protein [Vibrio furnissii CIP 102972]
 gi|260614469|gb|EEX39655.1| outer membrane protein [Vibrio furnissii CIP 102972]
          Length = 208

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q+   +F  +SS   P  +  ++++ + L    E  I ++G+         A  N  LS 
Sbjct: 83  QKLHILFANNSSTIPPVFMNQIRQMADFLKLYPEASIELQGYASKV---GKADHNLALSK 139

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
            R+ +    L++ GV+  RI +I G+    L +  +    ++ NRR+   V   +G
Sbjct: 140 QRSEAVRLQLLRFGVTPKRI-RIVGYGDTVLAVNGEDQVSHAQNRRVTASVVGFKG 194


>gi|256785509|ref|ZP_05523940.1| secreted protein [Streptomyces lividans TK24]
          Length = 206

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                         +    E     P  K    A   + ++ D+   +         ++ 
Sbjct: 27  ADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGDERREDT 86

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRG 270
              V                +   +F K SS    E    ++ I + +   +   + + G
Sbjct: 87  NTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRAQNATRVRVFG 134

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
            TD       +     LS  RA + + VL +S        ++ G+        +      
Sbjct: 135 FTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADNSTEAGR 191

Query: 331 --NRRIDI 336
             NRR+++
Sbjct: 192 KKNRRVEV 199


>gi|171463096|ref|YP_001797209.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192634|gb|ACB43595.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 166

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
             +  F         +   +L      L  +  + I I+G+ D       A  N  L   
Sbjct: 58  EKSVYFGFDEYTVQTKYQKMLSAHAGYLKANPKQKIIIQGNADER---GTAEYNLALGQR 114

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
           R+ +  + L   GVS+D++  +S F   + K    ++   + NRR DI+
Sbjct: 115 RSDAVCKSLNLIGVSDDQMEAVS-FGKEKPKAEGDNEAAWAENRRADIV 162


>gi|296280731|gb|ADH04663.1| OmpA [Riemerella anatipestifer]
          Length = 387

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 70/268 (26%), Gaps = 24/268 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSEAPGLPEFQGCPDTDGDGVPDKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       ++              F+ + +    E+   L
Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRSESNTKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336
             G           AS+     +R++ +
Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358


>gi|115374815|ref|ZP_01462090.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
 gi|115368211|gb|EAU67171.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
          Length = 261

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 14/213 (6%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +  +Q  +   +   + +  +   +         ++    LP   ++      +  R + 
Sbjct: 24  AQLEQEANESEARVAELQALRVSMERRLRVLEQQQQGATSLPGDLRKARELGTQMVRRET 83

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
               +++ L   +           T    +           +F+   S   P    VL +
Sbjct: 84  ARLNLTAKLKEELTRGDAWLDAIGTEALRLE-----LSERLLFEPGQSNLTPRGTEVLAR 138

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARD---NWRLSLDRAYSAYQVLMK--SGVSEDR 308
            G VLA        +  HTD  P    A     +W LS  RA +  + L +  + ++++R
Sbjct: 139 AGAVLAAVEGHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQER 198

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +S  +G A  R  + SD       NRR+ +++ 
Sbjct: 199 LSA-TGHASFRPVVPSDSPVNRLRNRRVTLMLR 230


>gi|224371626|ref|YP_002605790.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2]
 gi|223694343|gb|ACN17626.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2]
          Length = 310

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 13/230 (5%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           L I + ++    + +E+    +     +   + SL    +      K  ++     + ++
Sbjct: 84  LDIQAQDRPIPQELIESRNLMVEKQSSAIKERESLLEQIQAHTLTLKKLEIPMGQKRIQS 143

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L    +E        +             + + A  I   V      +G+ + +   +
Sbjct: 144 KNLFETGEELPGNTDFVEDDLVSLDLEKELTTKINAMGIRDWVELANNNSGLRLEV---Q 200

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              +F    S  +      L+KI  ++      + + G TD    ++    N  L   RA
Sbjct: 201 LPILFAPGRSTIIGSYEGFLEKIATLVKPYEVFVHVNGVTD--GAKSKKISNIDLGARRA 258

Query: 293 YSAYQVLMKSGVSEDRISKISGFAH----HRLKIASDPMNSANRRIDILV 338
            +    L+K G+    I KI+          +K+ + P  S NRR +I V
Sbjct: 259 TAIVNRLVKYGLPPS-IFKITSRGEYSEGSHMKV-NSP--SLNRRAEITV 304


>gi|186472020|ref|YP_001859362.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
 gi|184194352|gb|ACC72316.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
          Length = 371

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291
             +FD  S+    E    +  +   L      +V+++ G+TD          N  LS  R
Sbjct: 204 DALFDFDSAKLKAEGFEAVDVLASNLKRVKAIDVVTVIGYTDRF---GSVAHNRDLSRRR 260

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPM----NSANRRIDILV 338
           A +    L + GV       + G       +       P      + NRR++I V
Sbjct: 261 AQAVADALKQRGVDPGHFD-VRGAGSTAPVVTCPGPKKPAVIECLAPNRRVEIRV 314


>gi|197337791|ref|YP_002158113.1| OmpA family protein [Vibrio fischeri MJ11]
 gi|197315043|gb|ACH64492.1| OmpA family protein [Vibrio fischeri MJ11]
          Length = 306

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 6/137 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEV 258
            + +S    D   + V        ++     Q      F+   S  +      L +    
Sbjct: 22  DTYVSQENIDKYDERVQKFLIAECLVPQREIQIGVAEHFEFDKSEIMEGDFPSLNQFVRD 81

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +      I+I GHTD   ++   + N +LSL RA S    L+K   +++   +I  +   
Sbjct: 82  IEKLKGRIAIVGHTD---YQGSEKYNEQLSLRRADSIKTYLLKQLNADNYEWEIKYYGEK 138

Query: 319 RLKIASDP--MNSANRR 333
           +  I       N+ANRR
Sbjct: 139 KPLIEGRTLEANAANRR 155



 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 10/152 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIP 244
            KK L +     ++  +        + V  ET    +      +    M   FD   S+ 
Sbjct: 137 EKKPLIEGRTLEANAANRRAYLVFEQTVEKETNPACLPPEPKRKVYVTMASHFDFDKSVL 196

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +  + L K+   L   T  I I GHTD   ++     N +L+ +R+ +  + L    V
Sbjct: 197 KEKDKIELDKLALKLEGLTGRILIAGHTD---YQGSVSYNEKLAKERSIAVQEYLKTR-V 252

Query: 305 SEDRIS-KISGFAHHRLKIASDP--MNSANRR 333
              +   ++  F      I       N+ NRR
Sbjct: 253 DPTQFVWEVKSFGESEPIIQEHTLKANAENRR 284


>gi|121582538|ref|YP_974070.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
 gi|120608596|gb|ABM44335.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
          Length = 347

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 77/270 (28%), Gaps = 18/270 (6%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L   +            +S     ++    +      + +          ++ +     
Sbjct: 83  ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                   C     +    G          K+  + +   L  L    +  +        
Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLVKLDAHTVATLAMPAEADA 202

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIV 250
           +    +     +      + V    +   +   + +  +TP+    F  + +I   +   
Sbjct: 203 IPAGSAQLTDDV------QPVTVIASGPSVTTPVTETASTPLRSIPFPSAVAILNDDAKR 256

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            L ++   LA   E + IRG TD++        N  L++ RA +        GV   ++ 
Sbjct: 257 GLSELLP-LAMKAERVFIRGRTDST---GTVAGNRALAIARAATVRAAFASGGVDPRKLK 312

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338
               +       ++D       NRR+++ +
Sbjct: 313 --VSYCVTCFVASNDTEAGRSANRRVEVEL 340


>gi|88858031|ref|ZP_01132673.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Pseudoalteromonas tunicata D2]
 gi|88819648|gb|EAR29461.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Pseudoalteromonas tunicata D2]
          Length = 299

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
                F+          I  + ++ + +        +  GHTD          N  LS  
Sbjct: 192 EFIVYFEFDKDHLTKTAIATINEVKQAVNEWKPKTVVLSGHTD---LAGQNIYNEGLSTR 248

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           R  +    L+ +GV E++I  IS        +        + NRR++I +
Sbjct: 249 RVTNVLNGLILAGVPENKID-ISALGERHPAVRTPDGTKKAENRRVEIHL 297


>gi|167033774|ref|YP_001669005.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166860262|gb|ABY98669.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 831

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 79/265 (29%), Gaps = 35/265 (13%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +N+ +L+  S     + + L ++    S +   +   ++    S+  ++      L+  
Sbjct: 569 QRNTRELQPVSGVDSVEAEALPHDNRAQSIADFGKATLDTYVMLSQAMREKADPAFLKAH 628

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL- 225
           +       +   + +++ A              S  ++          V        ++ 
Sbjct: 629 LPDYWYPAIARHTGKRMAAAGSDASGDQDYLYASRQITFYSDQIREPDVPRILDNAFLMS 688

Query: 226 ----------------ISIIDQRNTPMFDKSSSIP---LPETIVVLQKIGEVLAHSTEVI 266
                           I  I   +  +F    +       E    L  I   L ++  + 
Sbjct: 689 SSRNYIDSLRAQSLRSIETITLESDTLFAFGRADFQSLKNEGQNQLSAIASKLLNTPNIG 748

Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            +   GH D       ++ N ++S  RA +    L+  GV  + +    G    +  +  
Sbjct: 749 KVVISGHADQL---GDSQGNLQVSKQRAQTIRTYLVGKGVPAE-LVVAQGEGSRKPLVNC 804

Query: 325 DPMNSA---------NRRIDILVED 340
           D              NRR++I V  
Sbjct: 805 DMQQPRAQLIKCLEPNRRVEIEVRG 829


>gi|284048662|ref|YP_003399001.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952883|gb|ADB47686.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 351

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 9/139 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              + +V + +   V        +            FD     P       L     V  
Sbjct: 215 KKAAPVVEEPVAPTVAEPAASAHVYNDYYLDSIH--FDSDVDTPKASEAAKLANFVAVAK 272

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +    + G+TD+         N  LS  R  +  +    +GV+  R+ +++    + 
Sbjct: 273 AHPDSTFKLVGNTDSD---ASNAYNEDLSKRRVLNVARYANDNGVAASRM-QLNYKGENN 328

Query: 320 LKIASDPMNSA--NRRIDI 336
              ++        NRR+DI
Sbjct: 329 PVSSNATEAGKADNRRVDI 347


>gi|289769405|ref|ZP_06528783.1| secreted protein [Streptomyces lividans TK24]
 gi|289699604|gb|EFD67033.1| secreted protein [Streptomyces lividans TK24]
          Length = 210

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
                         +    E     P  K    A   + ++ D+   +         ++ 
Sbjct: 31  ADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGDERREDT 90

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRG 270
              V                +   +F K SS    E    ++ I + +   +   + + G
Sbjct: 91  NTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRAQNATRVRVFG 138

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
            TD       +     LS  RA + + VL +S        ++ G+        +      
Sbjct: 139 FTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADNSTEAGR 195

Query: 331 --NRRIDI 336
             NRR+++
Sbjct: 196 KKNRRVEV 203


>gi|157087553|gb|ABV21642.1| outer membrane protein [Riemerella anatipestifer]
          Length = 387

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 74/264 (28%), Gaps = 24/264 (9%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       +R     +D       T    +LK             ++N  
Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDACPDTPGLPELKGCPDTDGDGIADKDDNCP 170

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T D +   D   +        +      P    + +         
Sbjct: 171 EVAGPVENNGCPWPDT-DGDGVLDKDDACPEVAGPAENNGCPWPDTDNDGV--------- 220

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 +           + +       ++          N   F+ + +    E+   L
Sbjct: 221 ------LDKDDKCPTVPGLPQYNGCPKPQSEYAKDATGALNGIFFNFNKASIRTESNPKL 274

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVVALEARGVNPSQLKS 331

Query: 312 ISGFAH---HRLKIASDPMNSANR 332
             G           AS+     +R
Sbjct: 332 -KGVGSAEATVPASASNEERMKDR 354


>gi|329935272|ref|ZP_08285238.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
 gi|329305095|gb|EGG48954.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
          Length = 218

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 19/194 (9%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           + T     G D  +     ++          P  K    A     ++ D+   +      
Sbjct: 22  APTPALADGGDPSRPPGTVETSPPPTVDPNSPGLKLADGATLAAAKVLDIKSVVEDLGGE 81

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-E 264
              ++  + V F              +   +F K S    PE    +  I E +     +
Sbjct: 82  ERREDTNENVTFAL------------QAEVLFPKDSPKLNPEARSRIDAIAEEIKKQNAQ 129

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            + + G TD             LS  RA + +  L    +  D   ++ G++       +
Sbjct: 130 AVRVFGFTDNL---GSYAHGLVLSKRRAEAVHDELASR-LDGDVTFEVRGYSEDYPIADN 185

Query: 325 DPM--NSANRRIDI 336
                   NRR+++
Sbjct: 186 TSEQGRRKNRRVEV 199


>gi|310822107|ref|YP_003954465.1| peptidoglycan-associated lipoprotein (pal) family protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|309395179|gb|ADO72638.1| Peptidoglycan-associated lipoprotein (Pal) family protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 177

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               ++  S+   PE+   L+++ E L       ++I GHT           N  L   R
Sbjct: 63  GPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCEL---GTTEYNLALGQRR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           A  A   L+K GV    +  +  +      +  + + + S NRR + 
Sbjct: 120 AAMAKDYLVKLGVGPGNV-AVVSYGEESPAVLGSGEEVWSRNRRSEF 165


>gi|163740457|ref|ZP_02147851.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161386315|gb|EDQ10690.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
          Length = 326

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  +     +    L  + E L  + +   +  GHTD          N  +S  RA + 
Sbjct: 222 FETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTV---GSLEQNIAISERRADAV 278

Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             ++L  S V   R+  ++G         +        NRR+++++  R
Sbjct: 279 RRRLLADSAVGGARV-AVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326


>gi|46581507|ref|YP_012315.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601327|ref|YP_965727.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46450929|gb|AAS97575.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120561556|gb|ABM27300.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
 gi|311235156|gb|ADP88010.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris RCH1]
          Length = 167

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
                F+        E+  VL++  EV+     +   + GH D          N  L   
Sbjct: 60  DAKVYFEFDKFDLKAESKEVLKQKAEVMKKFPSIRVLVEGHCDER---GTQEYNLALGER 116

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           RA +AY+ L+  GV+  ++  IS +   R  +      +   NRR +  V
Sbjct: 117 RARAAYEYLVMLGVNAGQLEMIS-YGKERPAVEGHGEAAWSKNRRDEFKV 165


>gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061]
 gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila]
 gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC
           19061]
          Length = 369

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 7/93 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288
           R+  +F+ + S   PE    L  +   LA        + + G+TD          N  LS
Sbjct: 239 RSDVLFNFNKSTLKPEGQQELDNLYNQLAKIDPTQGNVVVIGYTDRI---GSQNFNLPLS 295

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
             RA S    L+  G+  + I    G       
Sbjct: 296 HKRAQSVVDYLVAKGIPANSIQA-EGRGKESPV 327


>gi|299138485|ref|ZP_07031664.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599731|gb|EFI55890.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 256

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286
                    +D  S    P+    +      L     +   I G+ D       A  N  
Sbjct: 145 FHQNVQDLFYDYDSFDLRPDAQSSVMHAASYLNAHPAIKVLIGGYCDDR---GSAEYNIT 201

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
           L  +RA +A   L+ +GVS +R+ ++  +   +      ++     NRR    ++ 
Sbjct: 202 LGENRANAAKTALVSAGVSANRL-RVVSYGKEKQFCTEENESCWQQNRRAQFTLDK 256


>gi|296136329|ref|YP_003643571.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
 gi|294340565|emb|CAZ88950.1| putative OmpA/MotB precursor [Thiomonas sp. 3As]
 gi|295796451|gb|ADG31241.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
          Length = 230

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 17/117 (14%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
              F  + ++ LP     L  +   +      + I  G+TD+         N +LS+ RA
Sbjct: 111 DAFFQFNKAVLLPAGKEKLDDLAGKIKAINLEVVIATGYTDSF---GSVAYNQKLSVRRA 167

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----------MNSANRR--IDIL 337
            +    L+  GV  D+I  + G      ++                + NRR  ++++
Sbjct: 168 EAVKAYLVSQGVPADKIY-VEGKGKTDFRVDPKSCKGSFKSQVECQAPNRRTVVEVV 223


>gi|221638345|ref|YP_002524607.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221159126|gb|ACM00106.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 696

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           + GS    + +                       +    +   +         I+  E+Y
Sbjct: 457 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 516

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230
               +S+    A           + +   L      ++ +       R    +  +    
Sbjct: 517 QAVDVSRLPEPAPVYSFVQTRDERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 576

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             +   FD  S+   P+    L  +G+ +A        EV  I GHTDA      A  N 
Sbjct: 577 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 633

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LS  RA S    L +   V  + +  + G+    L++ SD     NRR+ + +
Sbjct: 634 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 686


>gi|319641785|ref|ZP_07996465.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A]
 gi|317386574|gb|EFV67473.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A]
          Length = 396

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++K K  +Q + K I   +   +   + + V   +    +     D  N   F+   + 
Sbjct: 237 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 290

Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+   ++ +I + +L  +++   I G TDA   +  ++ N  LS  RA +    L+K 
Sbjct: 291 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 347

Query: 303 GVSEDRISKISGFA 316
           GV  +++ K  G  
Sbjct: 348 GV-PNKMLKAKGVG 360


>gi|294775157|ref|ZP_06740683.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|294450969|gb|EFG19443.1| OmpA family protein [Bacteroides vulgatus PC510]
          Length = 396

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++K K  +Q + K I   +   +   + + V   +    +     D  N   F+   + 
Sbjct: 237 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 290

Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+   ++ +I + +L  +++   I G TDA   +  ++ N  LS  RA +    L+K 
Sbjct: 291 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 347

Query: 303 GVSEDRISKISGFA 316
           GV  +++ K  G  
Sbjct: 348 GV-PNKMLKAKGVG 360


>gi|254883115|ref|ZP_05255825.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254835908|gb|EET16217.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 410

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++K K  +Q + K I   +   +   + + V   +    +     D  N   F+   + 
Sbjct: 251 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 304

Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+   ++ +I + +L  +++   I G TDA   +  ++ N  LS  RA +    L+K 
Sbjct: 305 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 361

Query: 303 GVSEDRISKISGFA 316
           GV  +++ K  G  
Sbjct: 362 GV-PNKMLKAKGVG 374


>gi|150004726|ref|YP_001299470.1| hypothetical protein BVU_2187 [Bacteroides vulgatus ATCC 8482]
 gi|149933150|gb|ABR39848.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 423

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            ++K K  +Q + K I   +   +   + + V   +    +     D  N   F+   + 
Sbjct: 264 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 317

Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+   ++ +I + +L  +++   I G TDA   +  ++ N  LS  RA +    L+K 
Sbjct: 318 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 374

Query: 303 GVSEDRISKISGFA 316
           GV  +++ K  G  
Sbjct: 375 GV-PNKMLKAKGVG 387


>gi|281192981|gb|ADA57643.1| outer membrane protein A precursor [Aeromonas hydrophila]
          Length = 343

 Score = 70.0 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 18/125 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
            +  +         PE +  L  + + +           + G+T+          N +LS
Sbjct: 219 NSDVLLAFGKDSLKPEGVAALNALYQQIVEFQPKDGNAVVVGYTNRI---GSDAYNQKLS 275

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----------DPMNSANRRIDIL 337
             RA +    L+  G++  ++  I G         +               + +RR+++ 
Sbjct: 276 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVKAKAQLTSCLAPDRRVEVR 334

Query: 338 VEDRQ 342
           V   Q
Sbjct: 335 VSGVQ 339


>gi|311696332|gb|ADP99205.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 146

 Score = 70.0 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +  +      + I  LQ+    L     V   I GH+D          N  LS  RA + 
Sbjct: 40  YGFNKHSLDKDDIAFLQQHAAYLKEHPSVSVRIHGHSDNF---GSEDYNQFLSRLRANAV 96

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + L++ GV E RI  +  +   R     +   +ANRR+++
Sbjct: 97  ARSLIQEGVEESRIL-MRHWGSARPLATPE-DRAANRRVEL 135


>gi|160889745|ref|ZP_02070748.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
 gi|270294032|ref|ZP_06200234.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478785|ref|ZP_07937937.1| OmpA family protein [Bacteroides sp. 4_1_36]
 gi|156860737|gb|EDO54168.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
 gi|270275499|gb|EFA21359.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905045|gb|EFV26847.1| OmpA family protein [Bacteroides sp. 4_1_36]
          Length = 224

 Score = 70.0 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 9/148 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                +  +  +    V+ V        + +S        +F  +S+    E    L+++
Sbjct: 75  KMDKKAAEAAKIEGAQVEQVTDANGLPAVKVSF---AAGILFGFNSAALSNEAKASLREL 131

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            ++L         I GHTD          N ++S +RAY+    L   GVS  +  K+ G
Sbjct: 132 AQILKEDPTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPAQFKKVEG 188

Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342
             ++            NRR+++ +   +
Sbjct: 189 VGYNE--YDESLSADQNRRVEVYMYASE 214


>gi|26990523|ref|NP_745948.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
 gi|24985500|gb|AAN69412.1|AE016577_7 periplamic phosphate-binding protein [Pseudomonas putida KT2440]
          Length = 435

 Score = 70.0 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 14/262 (5%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           D     E      ++    E   K            +    R       L+    ++   
Sbjct: 179 DRSGTFETFKALVLEPQQGELSAKARRFESSDELAARVGTDRQAIGFSSLAAVHGAKVLA 238

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-- 202
            +         +  +    +  +++   ++LP   K +  A+    +       I+    
Sbjct: 239 VAEGDAPAMLPERARVASEDYPLSRRLYFYLPANPKPQAKALVDFAQSPAGQAIIAQQGF 298

Query: 203 -LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               + A ++            +            F + S+    + +  +Q++ E L  
Sbjct: 299 VSQQIKALSVAPQSDMPPPYRTLARQAQRLSVNFRFQEGSASLDNKALRDVQRVTEYLRQ 358

Query: 262 ---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                    + G  D       A     LS  RA +  + L + GV    + +++G    
Sbjct: 359 AGKLQGKAVLVGFGDPKETPGRAAL---LSRLRAQAVRRELARGGVE---VLQVTGMGDE 412

Query: 319 RLKIASDPMNS--ANRRIDILV 338
                ++       NRR+++ V
Sbjct: 413 LPVAGNELEQGRLRNRRVEVWV 434


>gi|332560366|ref|ZP_08414688.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
 gi|332278078|gb|EGJ23393.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
          Length = 701

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 13/152 (8%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID---QRNTPMFDKSSSIPLPETIVVL 252
            + +   L      ++ +       R    +  +      +   FD  S+   P+    L
Sbjct: 544 ERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAIDVDQITFDTGSAAIDPDEAEKL 603

Query: 253 QKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
             +G+ +A        EV  I GHTDA      A  N  LS  RA S    L +   V  
Sbjct: 604 ASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNLALSDRRAESVALALTEYFDVPP 660

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           + +  + G+    L++ SD     NRR+ + +
Sbjct: 661 ENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691


>gi|332186615|ref|ZP_08388358.1| ompA family protein [Sphingomonas sp. S17]
 gi|332013267|gb|EGI55329.1| ompA family protein [Sphingomonas sp. S17]
          Length = 220

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 52/196 (26%), Gaps = 12/196 (6%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
           C  +   D  +G     + D  ++                + A      +    + +   
Sbjct: 29  CAFAGKCDGVQGAQPVVTRDAPETKGFRLAKPSASGEASGVAA-----TVTSQPRSVDRA 83

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--- 259
                                  +          F+ +S+    E     Q     L   
Sbjct: 84  TRRSSLRRAHYTAPSAPAVNYGAVQRPRADLMIGFELNSARLSAEGTRAAQVFARSLLMP 143

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
               +   I GHTD    R  AR N  LS  RA +    L+  GV   R+    GF    
Sbjct: 144 ELKDKRFLIEGHTD---LRGGARINGPLSTARAKAVADYLVTLGVDRSRLET-RGFGSAM 199

Query: 320 LKIASDPMNSANRRID 335
                   +  NRR++
Sbjct: 200 PLPGHSKADPVNRRVE 215


>gi|78484705|ref|YP_390630.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
 gi|78362991|gb|ABB40956.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
          Length = 230

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 261 HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                +S+ G+TD      ++  R+NW LS  RA +  + L +S   +     ++G+  +
Sbjct: 134 SWRSEVSVAGYTDDDQIDPQSPLRNNWFLSTMRAQNVMKSLYQSSELKQSQFGVTGYGKY 193

Query: 319 RLKIASDPMN--SANRRIDILV 338
           R   +++     + NRR+ +++
Sbjct: 194 RPVASNETREGKAKNRRVQVMI 215



 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 51/145 (35%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           SW   + D +T+L+ FF++M ++N  +    +   +         +T      +  +   
Sbjct: 11  SWLFSFGDLVTLLITFFIMMIVLNKGEISQVQKWAESQLDTAYAQLTTQMADAEYVSLSR 70

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            ++   +++S  E   K   +L     ++  Q  +   ++      +           D+
Sbjct: 71  TANGISVNISHPEAFVKGGYNLSSALESELTQLGKALQSLKIFHLERSDVPIHILRIADA 130

Query: 152 EKGKDLCKSTDLEKSINKEENYFLP 176
           +      + +    + + + +   P
Sbjct: 131 DSLSWRSEVSVAGYTDDDQIDPQSP 155


>gi|90414986|ref|ZP_01222948.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
 gi|90323925|gb|EAS40525.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
          Length = 260

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               E      +   +  L  +    +     D +              + + ++    M
Sbjct: 71  KARDEAKAGFDKDAEITLLQYQTQQAIIQTQMDWLEYHTTCFDHSYS-EVELKEKLLVFM 129

Query: 237 -----FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                F  + +  LP+    L+    +L   S   + + GHTD+      +  N +L + 
Sbjct: 130 ALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTDSL---GTSDSNIQLGMK 186

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335
           RA +  + L++ GV  ++I  +           +       ANR+++
Sbjct: 187 RASAVKRFLIEQGVKSNQI-AVFSAGESMAMDDTHSRTQRLANRKVE 232


>gi|144898281|emb|CAM75145.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 300

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 9/163 (5%)

Query: 184 LAMKRKKRLQDLAKKISSTL--SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                  ++ ++A    + +     ++      V+      G +           FD   
Sbjct: 142 QEQNEGWQMDEIAACRGAFMTHMQQISAGPKMSVVQPAPAKGTVAGTKPTNYLVFFDFDK 201

Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +  LPE   ++    + + A    +I + G+TD          N +LS  R  +  Q L+
Sbjct: 202 ADLLPEARGIIASALKAITAEPQGMIKVTGYTDT---SGTPSYNDKLSARRGNAVEQALL 258

Query: 301 KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
             G++ DRI  +       L +          NRR  I +  +
Sbjct: 259 HGGIAADRI-SVDSRGESDLFVQTPDGVREPQNRRATIELMGK 300


>gi|114047773|ref|YP_738323.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
 gi|113889215|gb|ABI43266.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
          Length = 264

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +   R S     +  +        D   G          L   +              +L
Sbjct: 21  SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL 80

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
              S    D  K+     ++ +++   L    +            Q    ++ +    L+
Sbjct: 81  IGQSVSDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLL 140

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
           ++  +                        F   SS      +  L  + +V+  S+E  +
Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVVKVMKRSSESNL 181

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +RI+    F           
Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237

Query: 327 MNSA--NRRIDILVEDRQG 343
             S   +RR+ + ++  QG
Sbjct: 238 SESDVFDRRVTLTMQPNQG 256


>gi|325109023|ref|YP_004270091.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
 gi|324969291|gb|ADY60069.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 242

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 10/198 (5%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
            + +D E    L    +   S     +       +E       +   +     +      
Sbjct: 43  EMKQDGEMRAMLDALEERFGSSADMVSGVPGKSLQENSFYSTMQSSGRRSEDGLKKRSKD 102

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
                             ++          +FD  S+         L  +  VL   + +
Sbjct: 103 SQGTVGKNETAERVNHGNVVTM----GGPALFDPFSATLNESIRENLDILAGVLKTRSNL 158

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL-- 320
           I +RGH    P    +   D + LS  RA +    L++   + ++RI  +S         
Sbjct: 159 ICVRGHASPEPLPFDSPFADQFALSFARAEAVANYLIEDQKIPQERII-VSAAGDTEPRM 217

Query: 321 KIASDPMNSANRRIDILV 338
                    +NRR+D+ +
Sbjct: 218 LSRDAEQMGSNRRVDVFL 235



 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 1/132 (0%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD-DTKKAIEQYFNPFGKNL 76
           KK+V  D+ P  +  W + Y D M++L+ FF+++  ++        +A+         + 
Sbjct: 5   KKQVVQDEPPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEMKQDGEMRAMLDALEERFGSS 64

Query: 77  MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136
                G+  +                               T  K +     N+   ++ 
Sbjct: 65  ADMVSGVPGKSLQENSFYSTMQSSGRRSEDGLKKRSKDSQGTVGKNETAERVNHGNVVTM 124

Query: 137 SQQSEHCKNSLT 148
              +     S T
Sbjct: 125 GGPALFDPFSAT 136


>gi|188533999|ref|YP_001907796.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
 gi|188029041|emb|CAO96909.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
          Length = 407

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 15/181 (8%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
              E  + +     LP L   +  A    + L DL +++S  +           +     
Sbjct: 223 RSAEPLLQQIWQTPLPQLPGGQRTAAP--QDLFDLRQRLSDLIGS-------HRLDVTDG 273

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRN 279
             G  I +       +F    +   PE   ++ ++   +      + I  +TD   P  +
Sbjct: 274 DYGNKIILPAD---SLFTYQGAALTPEGRALVARVASAMESRKGTLLIGVYTDNRLPHSS 330

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
                +  S  +A +   ++++         +  G    R ++ ++     + NRR++I 
Sbjct: 331 PFTSTYAYSAAQAEAISNMMVQLIAHPCITVRAEGRGDSRGRVPNNSAENRARNRRVEIT 390

Query: 338 V 338
           +
Sbjct: 391 L 391


>gi|260575173|ref|ZP_05843173.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259022433|gb|EEW25729.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 438

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 97/286 (33%), Gaps = 15/286 (5%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT---KNSVDL 113
           TD +    +       G  L    K + +  +       +   + + +  T   +    +
Sbjct: 143 TDLEKFGLVVVGALVVGAILKNGDKVVSNTGDRVVVERDDGRYVVLKDDDTLLRRPGATV 202

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +  + +       +E +      + +    +       +    + +  D  + + + +  
Sbjct: 203 RTENFDDGSSRTTIERDDGSRIVTIRDASGRVLRRSRIDADGRVLRLIDDMEPVERIDVA 262

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            LP     +++   + +     A  ++S    L     ++ +        +  +I    +
Sbjct: 263 TLPQRDPARLVISTQDENAALRAALLASESDDLGRRFSLRQIREIREVRALAPTI--DVD 320

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLS 288
              FD  S+         L ++G ++A+      +E+  + GHTDA         N  LS
Sbjct: 321 NITFDTGSAAIKATEAAKLARLGRLVANLIAANPSEMFLVEGHTDAV---GSGSSNLALS 377

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
             RA S    L +  GV  + +  + G+    L+I +     ANRR
Sbjct: 378 DRRAESLALALTEYYGVPPENLV-VQGYGETELRIDTLANEPANRR 422


>gi|83312507|ref|YP_422771.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82947348|dbj|BAE52212.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 278

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD + S    E    L+++           I + GHTD          N +LS  RA 
Sbjct: 176 VYFDFNKSTLTKEAQKTLKEVATAAGQIKPASIYVAGHTDTVGKSG---YNDKLSNARAA 232

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           +  + L K+G+          F   +L + +  +   + NRR++I  E 
Sbjct: 233 AVSKQLAKAGIKS---IDAKSFGFTKLAVPTKANTKEAKNRRVEIYFEK 278


>gi|114767081|ref|ZP_01445964.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114540734|gb|EAU43800.1| OmpA domain protein [Roseovarius sp. HTCC2601]
          Length = 310

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+    + +  L  I   LA + +   +  GHTDA+        N  +S  RA +A
Sbjct: 206 FESGSASLGDDAVASLDAIAAYLAETPDRRVLFVGHTDAT---GSLEANIAVSRARADAA 262

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
              +   GV+  ++    G  +     ++        NRR++ ++   +
Sbjct: 263 MDYVRGKGVAAAQLGS-EGAGYLAPVASNLTEVGREENRRVEAILLPTE 310


>gi|308050648|ref|YP_003914214.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307632838|gb|ADN77140.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 166

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 9/106 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  S+   PE    L             + + GH D+         N  L   RA +  
Sbjct: 57  FDTDSARLRPEHHDQLAVFVGD--GVAGRVRVVGHADSR---GSLAHNQDLGGRRALAVS 111

Query: 297 QVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + L  + GV   +I +            +        NRR+++ +E
Sbjct: 112 KALSERYGVDASQIQR-QSLGETLPWRDNLTETGQTLNRRVELWIE 156


>gi|146281853|ref|YP_001172006.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
           A1501]
 gi|145570058|gb|ABP79164.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
           A1501]
          Length = 254

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 26/191 (13%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             L + ++   +  + L+   +   + L   V     +G+  E +    ++SI +     
Sbjct: 48  QKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALRRRGIKVEVSENHTVLSIPNDLLG- 106

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IARDNW 285
            FD  +            +IG+V+             + I I GHTD  P    + + NW
Sbjct: 107 -FDTGAYEIHSAYQARALEIGKVINEVISRDDRVEFLDTIFIEGHTDNRPLPGFMGKGNW 165

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK-----------ISGFAHHRLKIASD-PMNS--AN 331
            LS  RA S +Q    +   E+++S+           +SG+   R  +A          N
Sbjct: 166 GLSTFRAISLWQFWGDALAREEQLSRLNNKDGKPLFSVSGYGETRPAVADQVTEEDFKRN 225

Query: 332 RRIDILVEDRQ 342
           RRIDI    R+
Sbjct: 226 RRIDIRFTIRR 236


>gi|49187403|ref|YP_030655.1| chemotaxis protein motB, N-terminus [Bacillus anthracis str.
           Sterne]
 gi|227817293|ref|YP_002817302.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
 gi|254686999|ref|ZP_05150857.1| flagellar motor protein MotB [Bacillus anthracis str. CNEVA-9066]
 gi|254724562|ref|ZP_05186345.1| flagellar motor protein MotB [Bacillus anthracis str. A1055]
 gi|254736615|ref|ZP_05194321.1| flagellar motor protein MotB [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741653|ref|ZP_05199340.1| flagellar motor protein MotB [Bacillus anthracis str. Kruger B]
 gi|254754749|ref|ZP_05206784.1| flagellar motor protein MotB [Bacillus anthracis str. Vollum]
 gi|254757581|ref|ZP_05209608.1| flagellar motor protein MotB [Bacillus anthracis str. Australia 94]
 gi|49181330|gb|AAT56706.1| chemotaxis protein motB, N-terminus [Bacillus anthracis str.
           Sterne]
 gi|227002719|gb|ACP12462.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
          Length = 109

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 25  DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84
              +   +W I Y+D +T+L A F+V++ +++ D    K +   F        T +K   
Sbjct: 14  HEEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFL 72

Query: 85  DEQNPPERSSQNKIDLSIDE 104
            +Q P +    +   L  ++
Sbjct: 73  SDQKPNDEKELSASSLETEQ 92


>gi|54307571|ref|YP_128591.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
 gi|46911994|emb|CAG18789.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
          Length = 253

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               E      +   +  L  +    +     D +              + + ++    M
Sbjct: 64  KARDEAKAGFDKDAEITLLQYQTQQAVIQTQMDWLEYHTTCFDHSYS-EVELKEKLLVFM 122

Query: 237 -----FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                F  + +  LP+    L+    +L   S   + + GHTD+      + +N +L + 
Sbjct: 123 ALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTDSL---GTSDNNIQLGMK 179

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335
           RA +  + L++ GV  ++I  I           +       ANR+++
Sbjct: 180 RASAVKRFLIEQGVKSNQI-AIFSAGESMSMDDTHSRTQRLANRKVE 225


>gi|313498243|gb|ADR59609.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 435

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 70/230 (30%), Gaps = 14/230 (6%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
               +    R       L+ +  ++    +         +  +    +  +++   ++LP
Sbjct: 211 ELAARVGTDRQAIGFSSLATAHGAKVLAVAEGDAPAMLPERARVASEDYPLSRRLYFYLP 270

Query: 177 PLSKEKILAMKRKKRLQDLAKKISST---LSGLVADNIVKGVLFETTRTGILISIIDQRN 233
              K +  A+    +       I+        + A ++            +         
Sbjct: 271 ANPKPQAKALVDFAQSPAGQAIIAQQGFVSQQIKALSVAPQGDMPPPYRTLARQAQRLSV 330

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLD 290
              F + S+    + +  +Q++ E L           + G  D       A     LS  
Sbjct: 331 NFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKAVLVGFGDPKETPGRAAL---LSRL 387

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           RA +  + L + GV    + +++G         ++       NRR+++ V
Sbjct: 388 RAQAVRRELARGGVE---VLQVTGMGDELPVAGNELEQGRLRNRRVEVWV 434


>gi|297380304|gb|ADI35191.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           v225d]
          Length = 183

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 6/162 (3%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            KE +      K +Q       +           K            +       +  FD
Sbjct: 24  DKETVAGDVSAKTVQSAPVSTETVQEKQEPKEEPKQEPAPVVEEKPAVESGTIIASIYFD 83

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                        L +I +    +   + + G+TD       +  N  L + R  S    
Sbjct: 84  FDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNA 140

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
           L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 141 LIIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVDVKL 181


>gi|254361857|ref|ZP_04977991.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
 gi|3283200|gb|AAC32565.1| lipoprotein Plp4 [Mannheimia haemolytica]
 gi|153093396|gb|EDN74387.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
          Length = 284

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 143 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 199

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA------NRRIDI 336
           + +    L++ GV+  +I  + G+           +   +       NRR++I
Sbjct: 200 SNTVKARLVQQGVTA-QIEAV-GYGKANQVKACDGETGQALKDCLRPNRRVEI 250


>gi|258592566|emb|CBE68875.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 184

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           +    S +  +     V  E    G+++   D     +F   S+    +   +L K+   
Sbjct: 69  VQQLSSHVEEEIKTGSVEIERNDKGLILRFRDT---VLFGLGSATLSDDAKKILDKVARP 125

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315
           L +    I + GHTD  P R+     NW LS+ RA +  + L++       R+    G 
Sbjct: 126 LFNMPYAIEVEGHTDLLPIRSSNFPSNWELSVTRATAVIRHLVEVHRFPPARL-AARGM 183



 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 36  VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGKNLMTASKGIFDEQNPPERSS 94
            YAD +T+L+AFF+V++  +  D      +       FG  L                  
Sbjct: 2   TYADMITLLLAFFIVLYASSRVDGRKYSDLVSSIRMAFGVPLPPRPIVQAGNGGETLLPF 61

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
            + + L + +  +    ++K GS   ++  
Sbjct: 62  PDVVGLLVQQLSSHVEEEIKTGSVEIERND 91


>gi|89076293|ref|ZP_01162634.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
 gi|89047997|gb|EAR53586.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
          Length = 261

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 7/208 (3%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +  +Q E  +  L   + +G   C      +  N         L+     A    
Sbjct: 31  PPPKQAQLRQLELHQFELQLLAIRGAKHCLPGQYIRLQNLYLQARKEALNGFDHDAEMTL 90

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            + Q     I   +  L    +     +          +  + +   F  + +  LP+  
Sbjct: 91  LKYQTQNAVIQQQMDWLEYHTLCLQPNYSEVELKERFLLYMEVDNQ-FALNKTTLLPKYQ 149

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L+   E+L   S   + + G+TD+       + N+ L L+RA +    L+++GV  ++
Sbjct: 150 ESLRYAAEILKRQSHWHLQLTGYTDSQ---GHIQGNYMLGLERANAVKDFLIENGVDTNQ 206

Query: 309 ISKISGFAHHRLKIASDPMNSANRR-ID 335
           I  +     ++    +      N R ++
Sbjct: 207 I-SVFSVGENQAVADNTLTKQLNNRKVE 233


>gi|23012822|ref|ZP_00052818.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 278

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 15/230 (6%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
              K +Y+  +  IF     + +     +    ++      ++ +L  +  +   YF   
Sbjct: 57  QEAKVEYEWDDAAIFARKGLRAATGESVAPAEVTDWEVPAARTAELTAARARLVGYFGNG 116

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRN 233
             +    A  + + + D    +     G    +     L       +  +       +  
Sbjct: 117 ARERVPAAAAKAQVMFDC--WVEEEHEGDANSDCRAAFLKIEPELQVKAAAPAPKIVKTF 174

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    E    L+++           I + GHTD          N +LS  RA
Sbjct: 175 IVYFDFNKSTLTKEAQKTLKEVVASAGQIKPSSIYVAGHTDTVGKAG---YNDKLSKARA 231

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
            +  + L K GV          F   +L + +  +   + NRR++I  E 
Sbjct: 232 AAVEKQLAKLGVKS---IDAKAFGFAKLAVPTKANTKEAKNRRVEIYFEK 278


>gi|321472579|gb|EFX83548.1| hypothetical protein DAPPUDRAFT_239461 [Daphnia pulex]
          Length = 193

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +   +        PE+  VL+K    L    E    + G+ D    R     N +L   
Sbjct: 78  EDRVFYGFDRYDLAPESRAVLEKQAAWLLKYPEREAEVAGYCD---VRGTVEYNDKLGQR 134

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332
           RA +A   L   GV   R+S IS +      +        + NR
Sbjct: 135 RADAARDYLTSLGVHAGRLSTIS-YGKRITLVPGHTEEIYAQNR 177


>gi|190574772|ref|YP_001972617.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
 gi|190012694|emb|CAQ46322.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
          Length = 300

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 14/113 (12%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291
             +F   S++   E    +Q I   +      + I + G+TD       A  N  LS  R
Sbjct: 185 DALFGFDSAVLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRI---GSASYNQTLSQQR 241

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336
           A +    L++ GV    IS   G       +  +  N          NRR+ I
Sbjct: 242 AEAVRSALVQGGVPAASISA-EGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 293


>gi|226227699|ref|YP_002761805.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
 gi|226090890|dbj|BAH39335.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
          Length = 233

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 10/113 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F    +    E    L+K  +V         I++ G +D       A  N RLS +RA +
Sbjct: 113 FGFDDAAVRQEDQAALEKFAQVAQSHYPGATITVEGFSD---PAGSAAYNLRLSRERADA 169

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDRQG 343
               L+  G+    +  + G+   RL        +     NRR+  ++E   G
Sbjct: 170 VRDFLVTKGMDGAALRTV-GYGKARLVRPGAKGDESGAELNRRVTFVIESSGG 221


>gi|239817632|ref|YP_002946542.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239804209|gb|ACS21276.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 205

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 7/176 (3%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           + + ++     + + K       K  Q     + ++ + +V       V  +      + 
Sbjct: 34  LPQADDKPSAVIVRAKDGEEVLSKPYQRATAAVGASGAPVVDQADPAKVQADHKILFDMR 93

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
               QR T  F+   +   P +  V+ +        +   I + GHTD    +     N 
Sbjct: 94  PPAPQRYTVYFEVGGTTLTPASQQVMNEALMAAQSRSGSDIVVTGHTDT---KGALEQND 150

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
            LS  RA    Q+ ++      RI  + G     L + +        NRR+ I V 
Sbjct: 151 MLSQRRAQEVAQLFVERQFPAKRIEAV-GRGERELAVPTADEVDEPRNRRVTIEVR 205


>gi|146300540|ref|YP_001195131.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146154958|gb|ABQ05812.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 303

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 9/140 (6%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHS 262
               +            + +   I     T  F+ +  S     +    +  I + L + 
Sbjct: 168 EYKFETADTTSAVTDEWSALKDKINADPLTLHFNTNKSSFNLTNDEKQKVSDISKYLENV 227

Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
                 I GH+D          N  L+  RA      L+K+G+   RI            
Sbjct: 228 KNASVLIVGHSDNV---GNRELNIVLAQKRADFTKNYLIKNGIEASRIET-ESKGPDEPA 283

Query: 322 IASDPMNSA--NRRIDILVE 339
             +        NRR  I ++
Sbjct: 284 GDNTTAEGKASNRRTVITIK 303


>gi|327480088|gb|AEA83398.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri DSM
           4166]
          Length = 254

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 26/191 (13%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
             L + ++   +  + L+   +   + L   V     +G+  E +    ++SI +     
Sbjct: 48  QKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALRRRGIKVEVSENHTVLSIPNDLLG- 106

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IARDNW 285
            FD  +            +IG+V+             + I I GHTD  P +  + + NW
Sbjct: 107 -FDTGAYEIHSAYQARALEIGKVINEVISRDDRVEFLDTIFIEGHTDNRPLQGFMGKGNW 165

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK-----------ISGFAHHRLKIASD-PMNS--AN 331
            LS  RA S +Q    +   E+++S+           +SG+   R  +A          N
Sbjct: 166 GLSTFRAISLWQFWGDALAREEQLSRLNNKDGKPLFSVSGYGETRPAVADQVTEEDFKRN 225

Query: 332 RRIDILVEDRQ 342
           RRIDI    R+
Sbjct: 226 RRIDIRFTIRR 236


>gi|291615400|ref|YP_003525557.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291585512|gb|ADE13170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 204

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F++  +    E+I ++  I + +   +   + + GH        +   N  LS+ RA   
Sbjct: 103 FEEDGAKLTAESINMIADIRQEITRRAAPEVVVTGHASR---AGMDETNLSLSMQRAKVV 159

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             VL+  GV   +I ++ G         +        +RR++I V 
Sbjct: 160 RDVLVAGGVPA-QIIQVVGRGEFDPAATTQDGVAGPPSRRVEITVR 204


>gi|187918041|ref|YP_001883604.1| outer membrane protein [Borrelia hermsii DAH]
 gi|119860889|gb|AAX16684.1| outer membrane protein [Borrelia hermsii DAH]
          Length = 385

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 10/147 (6%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
              I + +   ++   +  +  E    GI +S+  +     F   S   + +    L+ I
Sbjct: 246 DNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIE-----FYPDSFQIIQKEYSKLKHI 300

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
             +L         I GHT         +    LS  RA+S    L+K  V         G
Sbjct: 301 ANLLEKFKNNNILIEGHTAKFE---TEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKG 357

Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340
           +   + K  +S P+ S NRR++I + +
Sbjct: 358 WGAKKPKYASSSPLASKNRRVEITILN 384


>gi|84514866|ref|ZP_01002229.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
 gi|84511025|gb|EAQ07479.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
          Length = 531

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L+ ++ D++   +      T +L +      T  F   SS         + ++  ++A
Sbjct: 381 RYLASILTDDVEVTLRQLRDMTQLLTAADRSSITFRFALGSSRLDARAQDDILRLANLIA 440

Query: 261 HSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSEDRI-SKISG 314
            S        + G+TDA         N  LS  RA    Q L  +   ++ D +  +  G
Sbjct: 441 TSDISNKELLLIGYTDAI---GDGASNLALSQQRAEEVRQALFAVAPSLASDDLPVRALG 497

Query: 315 FAHHRLKIASDPMNSA--NRRIDILVED 340
           F        ++  N    NRR+++ + D
Sbjct: 498 FGEISPLSCNETANGRRINRRVEVWLRD 525


>gi|268315730|ref|YP_003289449.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262333264|gb|ACY47061.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
          Length = 211

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 16/183 (8%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQD---LAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
             +   +   +            L+D       I S        ++ + V        + 
Sbjct: 20  ATQRALVEQQAAHIAQLQDSLAVLRDSLAFYDYIDSGRYDQDMRSLRETVDRLRYELAVC 79

Query: 226 ----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280
               + +  +    +F  +S+         L  + E LA   E    I G+TD  P  + 
Sbjct: 80  RDGGLRVAVELADDLFAPASATLTDRGRRRLDALAERLARFPEHRFRIEGYTDNVPIGDR 139

Query: 281 ----ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333
                  NW L+  RA +  +  ++  G+  +R  ++  +   R    +D       NRR
Sbjct: 140 LKERFPSNWELAAARAATVARYFIEAHGLDPERF-EVVSYGPTRPIGPNDTPEGRRLNRR 198

Query: 334 IDI 336
           + I
Sbjct: 199 VVI 201


>gi|108761761|ref|YP_631366.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108465641|gb|ABF90826.1| OmpA domain protein [Myxococcus xanthus DK 1622]
          Length = 449

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 87/284 (30%), Gaps = 11/284 (3%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           K  +           +  +                    +        +  +K     ++
Sbjct: 174 KAEMTAAMADVAIPDVPDAGAPVAAVAQAPAKPTPPPVTAPISPTPPVATPVKTVEAPEQ 233

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                 +  +  L+  + +       +      + +           ++    + P  + 
Sbjct: 234 GPVAPAKLLLKVLAGKRPAAATVYVKSATGAPQRVMVDRK------ARKPVEVMLPPGEY 287

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           ++  + +    Q     +S      V+  + K  + ++ +  +   +++    P F +  
Sbjct: 288 RLDVLSQGYLAQTRKVTLSREAVPTVSFTLAKAPVSKSQKVRLKKEVVELPRMPRFAEKQ 347

Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           + P   T   L  + ++        + I GHTD       A     LS  RA +  + L+
Sbjct: 348 AAPRNGTTAGLALLMDMFVRDEKLRLRIEGHTDNRERPAAAAR-KTLSEARAAAVAKALV 406

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            +G+   RI  + G    R K  +        NRR++ ++  ++
Sbjct: 407 DAGLDASRIETV-GLGDTRPKAPNLLPRGRELNRRVEFVLVRKE 449


>gi|116748202|ref|YP_844889.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697266|gb|ABK16454.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 189

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     +D  S +       +L +    L       +++ GH D          N  L  
Sbjct: 81  ENQDIYYDYDSYVLTEPAKRILDEKISFLKRYARVRVTVEGHCDER---GTTEYNLALGE 137

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
            RA SA Q +  SG+S   ++ +S +   R       +   + NRR   ++
Sbjct: 138 RRANSALQYIRNSGLSIQNLTSVS-YGKERPAAMGHDEASWAKNRRAHFVL 187


>gi|190894192|ref|YP_001984486.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
 gi|190699853|gb|ACE93936.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
          Length = 429

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 8/172 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             LPP    +   +    ++   + ++ + L   + + +   V        I++ I   R
Sbjct: 264 ATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIREGL---VTVSEDPQQIVVII---R 317

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
            + MFD +S       + +L +IG  L   +  + + GHTDA P +++A  +        
Sbjct: 318 ASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAIPVQSLAFPSNDSLSLAR 377

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            SA   ++KS + +    +  G        ++      + NRRI I++   Q
Sbjct: 378 ASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 429


>gi|117922218|ref|YP_871410.1| chemotaxis protein MotB-like protein [Shewanella sp. ANA-3]
 gi|117614550|gb|ABK50004.1| chemotaxis protein MotB-related protein [Shewanella sp. ANA-3]
          Length = 243

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 30/191 (15%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             S++   +++  K+ ++  + I   +   +A      V      T + I      +T  
Sbjct: 46  QKSEQIDASIEELKKAEEARRNILIDIKEELAKQ-NIHVEIVENDTVLRI----PESTLS 100

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-----------HSTEVISIRGHTDASPFRNIARDNW 285
           F+         T V  +     +A              + + + GHTD++      + NW
Sbjct: 101 FESGKDTLPENTTVKNEVRLIGIALHKAITTNERWKYLDTVFVEGHTDSNGIWYRGKGNW 160

Query: 286 RLSLDRAYSAYQ-VLMKSGVSED----------RISKISGFAHHRLKI---ASDPMNSAN 331
            LS DRA S ++    +  V+             +  +SG+A  R       ++   + N
Sbjct: 161 GLSTDRAVSIWKLWQTEINVAPKLSVLTNYNGQLLFSVSGYADTRRVDLQETTEEQRARN 220

Query: 332 RRIDILVEDRQ 342
           RRIDI    ++
Sbjct: 221 RRIDIRFTVKK 231


>gi|113970538|ref|YP_734331.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
 gi|113885222|gb|ABI39274.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
          Length = 264

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +   R S     +  +        D   G          L   +              +L
Sbjct: 21  SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLSGGALLGALVGGPVGAIIGGFTGTL 80

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
              S    D  K+     ++ +++   L    +            Q    ++ +    L+
Sbjct: 81  IGQSVSDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLL 140

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
           ++  +                        F   SS      +  L  + +V+  S+E  +
Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVAKVMKRSSESNL 181

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +RI+    F           
Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237

Query: 327 MNSA--NRRIDILVEDRQG 343
             S   +RR+ + ++  QG
Sbjct: 238 SESDVFDRRVTLTMQPNQG 256


>gi|299136066|ref|ZP_07029250.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298602190|gb|EFI58344.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 269

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 74/241 (30%), Gaps = 16/241 (6%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G + Q      L   +            +    + +     +  +  ++  ++       
Sbjct: 29  GLSRQHPAIADLVPGLAVKVEGSYDGDHQLVAKKVTFSRTAMNTARQIDAGLHPVNQQVA 88

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISS--------TLSGLVADNIVKGVLFETTRTGILIS 227
               + K      ++  QD AK             ++        + +     R   L  
Sbjct: 89  AAQDQLKSDRKDIEQNQQDTAKNSQDIDTTKQGLAVTTADTATNKQAIGQANQRFTTLDQ 148

Query: 228 IIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
             D+ + T  F    +    +    L    +  A++   +  ++G+  A      A  N 
Sbjct: 149 YEDKGSITVNFANGKATVSKKDKDQLTDFVKSAANTPGYMIEVQGYASAV---GSAALNQ 205

Query: 286 RLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           RLS +RA +   ++ ++GV    RI   +                ++ NRR+ + +   +
Sbjct: 206 RLSSERADAVLAIIQQTGVVPMTRILAPAAMGTTNPVSEDHTRSAHAQNRRVVVTIVVNK 265

Query: 343 G 343
           G
Sbjct: 266 G 266


>gi|224418201|ref|ZP_03656207.1| lipoprotein precursor [Helicobacter canadensis MIT 98-5491]
 gi|253827528|ref|ZP_04870413.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141736|ref|ZP_07803929.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
 gi|253510934|gb|EES89593.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130767|gb|EFR48384.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
          Length = 174

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSL 289
               F+    +   +   V+     VL   +     + + G+TD          N+ L L
Sbjct: 66  QNVFFNFDQFVIRADMQNVVDNDANVLKDVSAAPLSVRVEGNTDEW---GTDEYNYALGL 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
            RA +  + L+  GVSE +I  +S +   +           + NR++  
Sbjct: 123 KRAVAVKEALVAKGVSESKIVLVS-YGESKPTCTQKTRECWAENRKVTF 170


>gi|163784522|ref|ZP_02179384.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880208|gb|EDP73850.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 234

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 13/157 (8%)

Query: 195 LAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           + + ++  +   +   +       ++    +LI + +      F + S     E    L 
Sbjct: 72  MKEDVAKIIKKRLERILPIYAYQIDSIENYVLIRLFNDIA---FKEDSYQLTDEAKKALN 128

Query: 254 KIGEVLAHSTEVI---SIRGHT---DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           +I + +   +       + GH    + S      +D W LS+ RA     +L+K+G+ +D
Sbjct: 129 EIAKKIKKYSGYFDEIRVVGHAYVKNKSKLPRGIKDAWDLSIKRAEVIADILIKNGIKKD 188

Query: 308 RISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           +I  +  + + +      +  +   N R++I +  +Q
Sbjct: 189 KIV-LEAYGNKKPIYRWKNPILQRMNDRVEIYLNVKQ 224



 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70
          +   ++ P    +W I ++D M++L+ FF++++ +   D         YF 
Sbjct: 3  RKKKEECPA-APAWLISFSDLMSLLLTFFILLYAMTVLDIKKLMKFLWYFQ 52


>gi|15645739|ref|NP_207916.1| peptidoglycan associated lipoprotein precursor (omp18)
           [Helicobacter pylori 26695]
 gi|2314278|gb|AAD08169.1| peptidoglycan associated lipoprotein precursor (omp18)
           [Helicobacter pylori 26695]
          Length = 179

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
             L+  GV +D I  IS F   + K A         NRR+D+ +  
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKLMK 179


>gi|84687224|ref|ZP_01015105.1| Outer membrane protein, OmpA/MotB family protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84664812|gb|EAQ11295.1| Outer membrane protein, OmpA/MotB family protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 647

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 80/267 (29%), Gaps = 15/267 (5%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
           GK +++ S      QNP       K D +I                + +   +R      
Sbjct: 379 GKEIVSNSGDRIVVQNPDGTYQVLKNDDTILRQPGVVVSTKSYNDGSTRTVVERDNGVRI 438

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
               +      K +    +     L   T   + +++++     P+   +          
Sbjct: 439 VTIRAADGTVLKRTRVMPNGDQYVLFDDTVEAQPVSQQDVQDYEPIDDIRASDSDEAALR 498

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + L   +        +   V+          ++     + +   FD  S++        L
Sbjct: 499 EALMASMDRDPGRTYSLRQVRQFSGVRDLAPVI-----EVDAITFDTGSAVIRSGQAEEL 553

Query: 253 QKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
             +G+ +    E        I GHTDA      A  N  LS  RA S    L +   V  
Sbjct: 554 AALGQAIRSVIEERPDAVFLIEGHTDAV---GGAAYNLALSDRRAESVALALTEYFDVPP 610

Query: 307 DRISKISGFAHHRLKIASDPMNSANRR 333
           + +    G+    LKI +      NRR
Sbjct: 611 ENMIT-QGYGESELKIVTSEAERQNRR 636


>gi|312148404|gb|ADQ31063.1| outer membrane protein [Borrelia burgdorferi JD1]
          Length = 381

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S   L +    +  I ++L       I I GHT+      +  +   LS  RA + 
Sbjct: 278 FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAI 334

Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340
              L+K  V  +D+I    G+   + K   S P+ + NRR++I + +
Sbjct: 335 GNYLIKMKVKDKDQIL-FKGWGSQKPKYPKSSPLKAKNRRVEITILN 380


>gi|265751275|ref|ZP_06087338.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263238171|gb|EEZ23621.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 397

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
              +     D      F+    +    +  +L ++  +L +  +    I G+TDA     
Sbjct: 266 PVMVDTVFCDLLENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDAR---G 322

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            A+ N RLS  RA + Y+ L++ GV    + K  GF +    +   P  + N R
Sbjct: 323 SAQYNLRLSERRAKAVYKALLERGV-PSHMLKWRGFGNRAALVP--PAAADNIR 373


>gi|297569008|ref|YP_003690352.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924923|gb|ADH85733.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 194

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
               +D   S    +    L      +L +    + I G+TD          N  L   R
Sbjct: 88  MPVYYDFDRSNIRADQEERLVHNSNYMLDNPRVRVRIEGNTDER---GTREYNMALGERR 144

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           A SA + L+  GV+ +R+  +S +   R       +   S NRR D ++  
Sbjct: 145 ALSAKKYLIDLGVAAERLETLS-YGEERPISFGRDELSWSLNRRSDFVIIR 194


>gi|218675048|ref|ZP_03524717.1| OmpA family membrane protein [Rhizobium etli GR56]
          Length = 500

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D ++    +    LPP+     L         D  +     LS    + + +    +  
Sbjct: 306 EDPDRGYFDDPGADLPPMRLRVPLNDYIIDTSSDPDRDYYEFLSEPPVEQVERVYSLDEV 365

Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHT 272
           +    I         +T  F   S+         L+K+ + +        +E   I GHT
Sbjct: 366 KYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLEKDPSETFLIEGHT 425

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           DA       + N  LS  RA S   VL    G++ + +    G+    LK+ +      N
Sbjct: 426 DAV---GSDQSNLILSDQRAESVANVLTDVYGIAPENL-ATQGYGERYLKVNTSDPEQEN 481

Query: 332 RRIDI 336
           RR+ I
Sbjct: 482 RRVTI 486


>gi|261492650|ref|ZP_05989203.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494601|ref|ZP_05991082.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309713|gb|EEY10935.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311809|gb|EEY12959.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 268

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 127 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 183

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336
           + +    L++ GV+  +I  + G+       A D             NRR++I
Sbjct: 184 SNTVKARLVQQGVTA-QIEAV-GYGKANQVKACDGETGQELKDCLRPNRRVEI 234


>gi|317012903|gb|ADU83511.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Lithuania75]
          Length = 179

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|317486269|ref|ZP_07945101.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
 gi|316922439|gb|EFV43693.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
          Length = 165

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
                FD   S    E+  +L++  E++     +   I G+ DA         N  L   
Sbjct: 57  DGIVYFDFDKSDIKAESRDMLRQKAELMKAYPSIRVRIEGNCDAR---GTQEYNLALGER 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
           RA +AY+ L+  GV+ D++  IS F   R  +        + NRR D  V  +
Sbjct: 114 RARAAYEYLVMLGVNPDQMEMIS-FGKERPAVEGTGPAVWAKNRRDDFRVIAK 165


>gi|308062402|gb|ADO04290.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Cuz20]
          Length = 179

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALIIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVDVKL 177


>gi|320107635|ref|YP_004183225.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319926156|gb|ADV83231.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
          Length = 249

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 8/201 (3%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           ++       +   L K T  ++   ++ +            A     +    A + +   
Sbjct: 38  RSQTAPIVAQTNQLEKRTGDDQRNIQDTDARAQQGIAGAKSAAATADQHAMAAGQSADAA 97

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    D   +      T  G+         +  F    ++        L  +   L  + 
Sbjct: 98  NVNAKDAYNRVDSLAGTVAGLDKYKPLSDVSVTFRFDKAVLTAADKKELDAVASSLQTTR 157

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK 321
             +  + G TDA      A  N+ LS  RA +    L  K  +   +   + G    +  
Sbjct: 158 HYLLEVTGGTDAV---GDAAYNYALSQRRADAVVTYLAAKYNIPPHKFYMV-GIGKDQEV 213

Query: 322 IASDPM--NSANRRIDILVED 340
             +      + NRR+ + V  
Sbjct: 214 ATNKTAAGRAKNRRVQVRVLS 234


>gi|148251854|ref|YP_001236439.1| OmpA family protein [Bradyrhizobium sp. BTAi1]
 gi|146404027|gb|ABQ32533.1| putative exported protein of unknown function with OmpA family
           domain [Bradyrhizobium sp. BTAi1]
          Length = 727

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270
               + +   +      NT  F+  S    P+ +  LQ I + L         EV  I G
Sbjct: 580 EVRYSPSVRQLMPSIDLNTITFETGSWEIGPDQVAKLQVIADGLNQAIQRNPREVFLIEG 639

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329
           HTDA        DN  LS  RA S   +L +  GV  + ++   G+    LK  +   + 
Sbjct: 640 HTDAV---GNETDNLSLSDRRAESVATLLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSR 695

Query: 330 ANRRIDI 336
            NRR+ +
Sbjct: 696 INRRVTV 702


>gi|325525466|gb|EGD03280.1| flagellar motor protein MotB [Burkholderia sp. TJI49]
          Length = 109

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 37/59 (62%)

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           NW LS DRA ++ + L+  G+ E ++ ++ G A  +    +DP++  NRRI ++V +R+
Sbjct: 1   NWELSADRANASRRELIAGGMDEAKVMRVIGLASTQNLNKADPLDPENRRISVIVLNRK 59


>gi|258620771|ref|ZP_05715806.1| Outer membrane protein A [Vibrio mimicus VM573]
 gi|258586969|gb|EEW11683.1| Outer membrane protein A [Vibrio mimicus VM573]
          Length = 213

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 10/149 (6%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++     +  L+ +       L   + +N +   +       I +     +NT  FD 
Sbjct: 47  APQLNTAGVQGPLKQVRTSSYEALRQFLLNNGIDHEIMPGDYPMIKL-----KNTIKFDT 101

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            S+    ++   L ++ + LA  + +  +  GHTD +      + N  LS  RA S    
Sbjct: 102 GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GAQKFNDTLSEKRASSVKTA 158

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM 327
           L++  V+++ I    G+  H     +   
Sbjct: 159 LVQRQVAQNAIYT-RGYGEHVPACTNKTK 186


>gi|90579158|ref|ZP_01234968.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
 gi|90439991|gb|EAS65172.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
          Length = 297

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 8/155 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +++ + L   +S+        +  + +          I+         + ++S    
Sbjct: 143 QDWQRQNRSLEVGLSAVAFQKGYQSFSQCLSKLLPYGFEDIAFSVLH----YSENSDTLN 198

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I + + +S ++  +                  +S  RA    Q     G+ 
Sbjct: 199 KISQQRLAQIADFVRYSDDIDLVLVAAFNDSIAGTTES-QEMSERRAEKLRQYFQSLGLP 257

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            +R+ ++  +   R    +        NRR+ I +
Sbjct: 258 AERV-QVEAYGKRRPIADNSTPMGRNLNRRVVISL 291


>gi|304320152|ref|YP_003853795.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
 gi|303299055|gb|ADM08654.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
          Length = 397

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S        ++  +  E +      ++++G+TD       A  N  LS  RA 
Sbjct: 293 VYFDYDKSNLTDAANTLIAARAEEAIDADVASVTVQGNTDT---AGSASYNQALSARRAK 349

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
                L+ +GV +  I  +           +        NRR ++ 
Sbjct: 350 VVSDALVANGVDQSAI-TVEALGESNPAKPTGDGVREPLNRRTEVT 394


>gi|262274549|ref|ZP_06052360.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
           CIP 101886]
 gi|262221112|gb|EEY72426.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
           CIP 101886]
          Length = 292

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           +D++ +     ++  L +I E + +S ++  +    +TD          N RLS  RA  
Sbjct: 186 YDENGAELNKASMARLAQIAEFVRYSPDIDLVLMATYTDNR---GAKVANQRLSEIRAQK 242

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
                M  G+ +DRI ++  +   R    ++     + NRR+ I +
Sbjct: 243 LEAYFMSLGLPKDRI-QVEAYGERRPIAENESPIGRNKNRRVVISL 287


>gi|119947169|ref|YP_944849.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119865773|gb|ABM05250.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
          Length = 295

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKIGEVLAHSTEVISI- 268
            + V F      + +   ++ N   F+   +           L K+ + +     V+ I 
Sbjct: 156 KETVSFNQCANQLPVINYEEINQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKIL 215

Query: 269 -RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
             GH+D       +  N RLS  RA    Q L+ + V+ D + +I G        ++D  
Sbjct: 216 IDGHSDKY---GNSSQNLRLSKFRADEIAQTLINNSVNMD-LIEIRGHGGRYPIASNDSA 271

Query: 328 NSA--NRRIDILV 338
                NRR+ I +
Sbjct: 272 EGREKNRRVSIRL 284


>gi|119387029|ref|YP_918084.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119377624|gb|ABL72388.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
          Length = 711

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 74/253 (29%), Gaps = 10/253 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           N  +R      D S       N++  + GS  + + +         L             
Sbjct: 451 NTGDRVVVTLPDGSQQVIKDDNTLLYRPGSNVRTETFDDGSTRTTVLREDGSRVVTIRDA 510

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
             +  +   +       + I+  E   +   +      ++  +   D A    +      
Sbjct: 511 NMNILRRTLMRADGTETRLIDDTEAQPVQISTLPAPPPVRINRERLDEAALREALRREAA 570

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265
            D                +          FD  SS   P+    L  +G+V+  S +   
Sbjct: 571 IDRRFSLGQIRNIPEVRALVAPVNVPEITFDTGSSAITPDQAQELATLGKVIRDSIDQDP 630

Query: 266 ---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321
                I G+TDA         N  LS  RA S    L +   V  + +  + G+    L 
Sbjct: 631 REIYMIEGYTDAV---GSDAANLALSDRRAESVALALTEYFQVPPENMV-VQGYGEQFLL 686

Query: 322 IASDPMNSANRRI 334
           + +D     NRR+
Sbjct: 687 VPTDGPERQNRRV 699


>gi|95930151|ref|ZP_01312890.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
 gi|95133845|gb|EAT15505.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
          Length = 629

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 11/110 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+      +  L ++ + +           + G  D          N  LS  R  
Sbjct: 526 FKSGSTELDNRALRDLDRLVDFMHQGRNRYRPLMLFGFADNI---GENDVNQVLSEKRTR 582

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
                L   G++      + G         +        NRR+++ + + 
Sbjct: 583 KVSTALQSRGLNAK---VVMGLGEAMPVADNATSAGREKNRRVEVWISEP 629


>gi|209525121|ref|ZP_03273665.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
 gi|209494530|gb|EDZ94841.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
          Length = 322

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + ++          ++  + + I  +   N   F+  S+   P+ + ++ +I E L    
Sbjct: 179 AQIIPAAFDNIPGVKSVFSTLKIDPVRIENRIYFNFGSAQINPQDMKIITRITEFLDQYP 238

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +  + I GHTD    R  A  N +L+L+RA +    L K G+   R+  +    + + 
Sbjct: 239 KLSLRIIGHTD---LRGSAAINQQLALNRATAVRDALTKQGIDPKRLEIV---GNAQP 290


>gi|213163752|ref|ZP_03349462.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 196

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 8/124 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL    +  +++ G+TD++        N RLS  RA S    L+  GV   RI + SG  
Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192

Query: 317 HHRL 320
               
Sbjct: 193 PANP 196


>gi|332534695|ref|ZP_08410524.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035845|gb|EGI72328.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 432

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS    + I  + ++ + L  +    + I+GH          + N +LS  RA++ 
Sbjct: 328 FSADSSDVRSQYIQEISRLADFLKENPTKQVEIQGHAS---LDGDRKYNRKLSEKRAFAV 384

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            ++L+K   V   R+    G+   + ++       N+ANRRI+ ++ D
Sbjct: 385 AEILIKQFDVEPKRVKSF-GYGIDQPRVNEISVRANAANRRIEAVITD 431


>gi|158422404|ref|YP_001523696.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
 gi|158329293|dbj|BAF86778.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
          Length = 199

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKI----SSTLSGLVADNIVKGVLFETTRTGILIS 227
           +   P  ++  +   +  + L +L +      +++L     D+        + R  + I 
Sbjct: 17  SAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHATMYSGPPSQRPPLAIQ 76

Query: 228 IIDQRN---TPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281
           +           F  +S+I LP++   +  I + L +         + G+TD +      
Sbjct: 77  LDKLAQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYRFIVTGNTDTT---GTR 133

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             N +LS +RA +  + L  +  V+  R+  + G     L+   +P +  NRR+ I 
Sbjct: 134 EHNLKLSQERADAVVEALTTTFNVNPARLEAV-GLGEEALQDTKNPESPVNRRVQIF 189


>gi|90409039|ref|ZP_01217166.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
 gi|90309846|gb|EAS38004.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
          Length = 232

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 10/140 (7%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           + +     F    + +L    D     +  + K+       +   L+ IG+ + +   + 
Sbjct: 96  NFLKSYDEFNNCISNLLPYNFDDIAYSILKYAKNGVQLDTFSKKRLKMIGDYIQYDENIS 155

Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            I   G++DA         N  LS  RA +    L + G+  D+I +++ F        +
Sbjct: 156 VILLSGYSDAY---GTESHNMALSTKRAEAIKSYLKEIGMQSDKI-QVASFGEKHHVADN 211

Query: 325 DP--MNSANRRIDILVEDRQ 342
                   NRR+ I +E  +
Sbjct: 212 SNILGRIQNRRVVISIEREE 231


>gi|116327088|ref|YP_796808.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116332255|ref|YP_801973.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
 gi|116119832|gb|ABJ77875.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116125944|gb|ABJ77215.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
          Length = 242

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
          +     ++  N   W + YAD +T+L+  F++M+ I+  D    K +  
Sbjct: 11 RAHRKGESHENRERWLLTYADMITLLLGLFIIMYSISQVDQAKLKQVAD 59


>gi|305666576|ref|YP_003862863.1| OmpA/MotB family outer membrane protein [Maribacter sp. HTCC2170]
 gi|88708847|gb|EAR01082.1| outer membrane protein, OmpA/MotB family [Maribacter sp. HTCC2170]
          Length = 393

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 65/194 (33%), Gaps = 12/194 (6%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           K L +  + + ++ +E       +       ++ K+      +         +A      
Sbjct: 203 KGLTRKGEKKLALIQEMEKEQQRVQDSLANELRIKEEATLAQRLAKEKEKARLAAIEKAR 262

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
           +  E  R   L + I +     F  +SS     +  VL  +  +L       + I  HTD
Sbjct: 263 IDAENQRKQQLENSIKELGLVYFGFNSSYLNKNSKSVLGLLANLLKEKPSVHLKITSHTD 322

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDP 326
           +      +  N  LS  R       LM  G+SE+R+     F   +L          S  
Sbjct: 323 SR---GASDYNKWLSERRVERTKNYLMSIGISENRLVA-EAFGEEQLTNECGDGVRCSAE 378

Query: 327 MNSANRRIDILVED 340
            +  NRR +  V +
Sbjct: 379 KHRKNRRSEFEVTE 392


>gi|330948387|gb|EGH48647.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 64

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           N  LS  RA S    L   GV +  +  + G    +   ++      + NRR+++ ++  
Sbjct: 1   NMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPI 59

Query: 342 QG 343
            G
Sbjct: 60  PG 61


>gi|163756036|ref|ZP_02163152.1| OmpA/MotB [Kordia algicida OT-1]
 gi|161323910|gb|EDP95243.1| OmpA/MotB [Kordia algicida OT-1]
          Length = 277

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 11/206 (5%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           + S  R +     L +  +   +  ++E     P    K       K+ + ++   S   
Sbjct: 73  ELSENRATTVANYLKEHYESFINSIEQEAKGELPTETTKQNERIGVKKHRKVSISASKND 132

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                    + +        + +          F       +  +   L+K+   L  + 
Sbjct: 133 HKPKVVERKENIYV-VPINELRVGNTYALGKINFKTGRVTLIKSSKKELEKLVRFLKKNR 191

Query: 264 E-VISIRGHTDASPFRNIARDNWR-----LSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
              I ++GH       +    N       LS+DRA   Y+ L+  G+S++R+    G+A 
Sbjct: 192 NIHIEVQGHVCCGGDDDSDALNSETGTETLSVDRARFIYKYLISRGISKERL-TYKGYAF 250

Query: 318 HRLK---IASDPMNSANRRIDILVED 340
                         SANRR++I +  
Sbjct: 251 KAPLRFPEKGSRDRSANRRVEIEITK 276



 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 4/77 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNW 285
              +      FD        +    +      L  +T    +  G+TD   F +    N 
Sbjct: 16  QAQEIEFDIYFDSGKFTLSSQHQKKINTQLADLDSTTTYNFVIKGYTD---FVDTEHFNL 72

Query: 286 RLSLDRAYSAYQVLMKS 302
            LS +RA +    L + 
Sbjct: 73  ELSENRATTVANYLKEH 89


>gi|307256515|ref|ZP_07538296.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306864925|gb|EFM96827.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 283

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  E + + G+TD        + N  LS  R
Sbjct: 141 GDFLFDFDKDTLTAKGKDVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337
           A      L++ GV+ + I+ + G+   +   A D  P           NRR+++     +
Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255

Query: 338 VEDRQG 343
           ++  +G
Sbjct: 256 LKQNEG 261


>gi|303250252|ref|ZP_07336452.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307252017|ref|ZP_07533917.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650868|gb|EFL81024.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306860486|gb|EFM92499.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 283

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  E + + G+TD        + N  LS  R
Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337
           A      L++ GV+ + I+ + G+   +   A D  P           NRR+++     +
Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255

Query: 338 VEDRQG 343
           ++  +G
Sbjct: 256 LKQNEG 261


>gi|126207944|ref|YP_001053169.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae L20]
 gi|165975919|ref|YP_001651512.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|190149806|ref|YP_001968331.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|307245299|ref|ZP_07527387.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254248|ref|ZP_07536089.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258710|ref|ZP_07540442.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260944|ref|ZP_07542627.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263126|ref|ZP_07544747.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|126096736|gb|ABN73564.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|165876020|gb|ABY69068.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|189914937|gb|ACE61189.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|306853640|gb|EFM85857.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862795|gb|EFM94748.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867061|gb|EFM98917.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869356|gb|EFN01150.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871488|gb|EFN03211.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 283

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  E + + G+TD        + N  LS  R
Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337
           A      L++ GV+ + I+ + G+   +   A D  P           NRR+++     +
Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255

Query: 338 VEDRQG 343
           ++  +G
Sbjct: 256 LKQNEG 261


>gi|53728845|ref|ZP_00134888.2| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 294

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  E + + G+TD        + N  LS  R
Sbjct: 152 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 208

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337
           A      L++ GV+ + I+ + G+   +   A D  P           NRR+++     +
Sbjct: 209 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 266

Query: 338 VEDRQG 343
           ++  +G
Sbjct: 267 LKQNEG 272


>gi|188995160|ref|YP_001929412.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594840|dbj|BAG33815.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
          Length = 672

 Score = 69.2 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 34/140 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
              ++D   +   PE++  L ++  +L  + ++   +  H D    +     N  LS  R
Sbjct: 535 QNILYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADR---KGPDAYNLGLSDRR 591

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------------------PMN 328
           A S    L   G++ DR+    G+     K  +                           
Sbjct: 592 AKSVVDYLTSRGIAADRL-TWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEE 650

Query: 329 SA------NRRIDILVEDRQ 342
                   NRR +  V + +
Sbjct: 651 QQSVCDQLNRRTEFRVIEEE 670


>gi|308184866|ref|YP_003928999.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           SJM180]
 gi|308060786|gb|ADO02682.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           SJM180]
          Length = 179

 Score = 69.2 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|117920854|ref|YP_870046.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117613186|gb|ABK48640.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 264

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 74/259 (28%), Gaps = 26/259 (10%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +   R S     +  +        D   G          L   +              +L
Sbjct: 21  SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL 80

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
              S    D  K+     ++ +++   +    +            Q    ++ +    L+
Sbjct: 81  IGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLL 140

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
           ++  +                        F   SS      +  L  + +V+  S+E  +
Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVAKVMKRSSESNL 181

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +RI+    F           
Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237

Query: 327 MNSA--NRRIDILVEDRQG 343
             S   +RR+ + ++  QG
Sbjct: 238 SESDVFDRRVTLTMQPNQG 256


>gi|307318588|ref|ZP_07598022.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
 gi|306895928|gb|EFN26680.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
          Length = 489

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E         + ++    +  Y LPP+     +        +D  +     LS    
Sbjct: 284 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 343

Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260
           + + +    +  R    +         +T  F   S+         ++ + E +      
Sbjct: 344 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 403

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              E   I GHTDA       + N  LS +RA S   +L +  G+  + +    G+    
Sbjct: 404 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 459

Query: 320 LKIASDPMNSANRRIDI 336
           LKI +D     NRR+ I
Sbjct: 460 LKIRTDGPEQENRRVTI 476


>gi|298735871|ref|YP_003728396.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
 gi|298355060|emb|CBI65932.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177


>gi|332534626|ref|ZP_08410458.1| putative component of sodium-driven polar flagellar motor
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035906|gb|EGI72387.1| putative component of sodium-driven polar flagellar motor
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 292

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248
           +  Q+ A KI+  +S +           +     +  S  D   T M +  +SS     +
Sbjct: 141 QDWQNSADKIAVGISSVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199

Query: 249 IVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
              L KI E L +  S E ISI  +TD+        +N  LS  RA +    ++  GV E
Sbjct: 200 QQRLDKIAEYLKNDASIESISIDSYTDSY---GGRWNNLDLSRKRAKTIKDYMVSLGVDE 256

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            ++   +G    R    +D       NRR+ I +E 
Sbjct: 257 AKVQT-TGLGEKRFVDNNDNILGRDKNRRLIIQIEK 291


>gi|315497902|ref|YP_004086706.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
 gi|315415914|gb|ADU12555.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
          Length = 407

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284
           +    +     F+   S    +   ++Q+  +     +   + + GH D       A  N
Sbjct: 294 VKYEAREFIVYFEFDQSTLTADAQAIVQQAADYAKAGNATRVVVVGHADT---SGSAAYN 350

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336
            RLS  RA +    L   GVS   I  +         +A+        NRR  IDI
Sbjct: 351 IRLSERRAKTVADALAGLGVSGS-ILAVDWKGESAPAVATGDGVKEPLNRRSTIDI 405


>gi|45659158|ref|YP_003244.1| hypothetical protein LIC13339 [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|45602404|gb|AAS71881.1| MotB [Leptospira interrogans serovar Copenhageni str. Fiocruz
          L1-130]
          Length = 242

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
          K    +++  N   W + YAD +T+L+  F++M+ I+  D    K +  
Sbjct: 11 KGHRKEESHENRERWLLTYADMITLLLGLFIIMYSISQVDQTKLKQVAD 59


>gi|317011324|gb|ADU85071.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           SouthAfrica7]
          Length = 182

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 70  IESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 126

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 127 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGEAKPKCTQKTRECYKENRRVDVKL 180


>gi|95117797|gb|ABF57086.1| Omp22 [Helicobacter pylori]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|227539888|ref|ZP_03969937.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240166|gb|EEI90181.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
          Length = 446

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--- 140
            D Q+P   +     D+ + E        +        ++  R       L         
Sbjct: 185 SDIQSPAVETPIPPADIPVVEPPVLTVPPVNPEPAIHTREAVREVKKSSGLWWILIPLVL 244

Query: 141 --------EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                   + C  +    S+   +   ++ +    +           +  IL +   + L
Sbjct: 245 VALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPSDSLGATDGLSNRESVILKLPDGQEL 304

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   + I   L   +  +                      +   F+  ++  LP +   L
Sbjct: 305 RAYPRGIEDNLIKFLQSDYKALPDDTLKNKW------FDFDNLNFETGTAKILPASRDQL 358

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +  +L    +  + I G+TD +        N +LSLDRA +    L + G+   +++ 
Sbjct: 359 LNLAAILKVFPDAKVKIGGYTDKT---GDEAFNKKLSLDRANAVKVFLDEQGLGA-QVAG 414

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDILVED 340
             G+          A +     +RR+ + V  
Sbjct: 415 TEGYGSEIARYPADAPESDRIKDRRVSVSVRK 446


>gi|325205456|gb|ADZ00909.1| ompA family protein [Neisseria meningitidis M04-240196]
          Length = 244

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 106 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 162

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 163 VANNLVSNGVPVSRISAV-GLGESQ 186


>gi|54294009|ref|YP_126424.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
 gi|53753841|emb|CAH15307.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
          Length = 234

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 49/195 (25%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               K++ ++ +     L  +      +GV         ++ + +     +F        
Sbjct: 38  QSATKKVTEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRLPES---ILFGVDQYQVN 94

Query: 246 PETIVVLQKIGEVLAHSTEVI-------------------------SIRGHTDASPFRNI 280
            E  + L K+  VL      +                          I GHTD++     
Sbjct: 95  EEGKIALSKLASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDST---GS 151

Query: 281 ARDNWRLSLDRAYSAYQVLMK------------SGVSEDRISKISGFAHHRLKIASDPMN 328
           +  NW LS  RA S +  L+             +G+    I  +SG+   R    ++   
Sbjct: 152 SEHNWYLSARRAISVFNELIDAKPLLNVGLKNINGIP---ILNVSGYEARRPIDPNN--L 206

Query: 329 SANRRIDI-LVEDRQ 342
           S NRRI++  +    
Sbjct: 207 SVNRRIELRFIMRSP 221


>gi|300774087|ref|ZP_07083956.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760258|gb|EFK57085.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 446

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--- 140
            D Q+P   +     D+ + E        +        ++  R       L         
Sbjct: 185 SDIQSPAVETRIPPADIPVVEPPVLTVPPVNPEPAIHTREAVREVKKSSGLWWILIPLVL 244

Query: 141 --------EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                   + C  +    S+   +   ++ +    +           +  IL +   + L
Sbjct: 245 VALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPADSLGAADGLSNRESVILKLPDGQEL 304

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   + I   L   +  +                      +   F+  ++  LP +   L
Sbjct: 305 RAYPRGIEDNLIKFLQSDYKALPDDTLKNKW------FDFDNLNFETGTAKILPASRDQL 358

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
             +  +L    +  + I G+TD +        N +LSLDRA +    L + G+   +++ 
Sbjct: 359 LNLAAILKVFPDAKVKIGGYTDKT---GDESFNKKLSLDRANAVKVFLDEQGLGA-QVAG 414

Query: 312 ISGFAH---HRLKIASDPMNSANRRIDILVED 340
             G+          A +     +RR+ + V  
Sbjct: 415 TEGYGSEIARYPADAPESDRIKDRRVSVSVRK 446


>gi|94499424|ref|ZP_01305961.1| OmpA family protein [Oceanobacter sp. RED65]
 gi|94428178|gb|EAT13151.1| OmpA family protein [Oceanobacter sp. RED65]
          Length = 465

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +++ + +    L  +     +        + I+         F + S+    + +  +Q+
Sbjct: 332 ISQNVEAMDVALPDELPQDYLAMVKNAKRLSINFR-------FKEGSAKLDNKALKDIQR 384

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +   +    +   +  G  D    +  ++    LS  RA +  + L + G+  D   +  
Sbjct: 385 LAYYMTEHPQQELVLIGFGDRRKNKERSKL---LSKLRAMAVRRELSRLGIYPD---EAE 438

Query: 314 GFAHHRLKIASDPMNS-ANRRIDILVE 339
           G+  +    A +   +  NRR+++ + 
Sbjct: 439 GYGEYNPVAAFEQSAATKNRRVEVWLR 465


>gi|330013026|ref|ZP_08307548.1| OmpA family protein [Klebsiella sp. MS 92-3]
 gi|328533612|gb|EGF60326.1| OmpA family protein [Klebsiella sp. MS 92-3]
          Length = 90

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIA 323
              + GHTD          N  LSL RA S      +   V    +    G        +
Sbjct: 15  HSRLEGHTDNY---GEDSYNEALSLKRANSVADAWAEGAHVPRSNLVT-RGLGKKYPIAS 70

Query: 324 SDPM--NSANRRIDILV 338
           +D     + NRR+ +++
Sbjct: 71  NDTAAGRAENRRVTVVI 87


>gi|4098205|gb|AAD09577.1| Omp22 [Helicobacter pylori]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 8/144 (5%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             +S+ ++    +   +       +    +       +  FD             L +I 
Sbjct: 40  APVSTEIAQEKQEPKQEPAPVVEEKP--AVESGTIIASIYFDFDKYEIKESDQETLDEIV 97

Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +    +   + + G+TD       +  N  L + R  S    L+  GV +D I  IS F 
Sbjct: 98  QKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTIS-FG 153

Query: 317 HHRLKIASDPMN--SANRRIDILV 338
             + K           NRR+D+ +
Sbjct: 154 ETKPKCTQKTRECYKENRRVDVKL 177


>gi|315180476|gb|ADT87390.1| hypothetical protein vfu_A02253 [Vibrio furnissii NCTC 11218]
          Length = 271

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV--LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L+ I E+       + + I GH+D+         N  +S  RA  
Sbjct: 167 FQSGVLALTQNQRSQLEAISELVLFDPKIKTVRITGHSDS---HGDTVVNLSVSRRRADD 223

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
               +M +GV  + + +I G         +        NRR++I +  R
Sbjct: 224 VAYWMMMAGVPTE-MMEIRGQGGRYPVGNNATEEGRLANRRVEIELVRR 271


>gi|315181670|gb|ADT88583.1| outer membrane protein, hypothetical [Vibrio furnissii NCTC 11218]
          Length = 208

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q+   +F  +SS   P  +  ++++ + L    E  I ++G+         A  N  LS 
Sbjct: 83  QKLHILFANNSSTIPPVFMNQIRQMADFLKLFPEASIELQGYASKV---GKADHNLALSK 139

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343
            R+ +    L++ GV+  RI +I G+    L +  +    ++ NRR+   V   +G
Sbjct: 140 QRSEAVRLQLLRFGVTPKRI-RIVGYGDTVLAVNGEDQVSHAQNRRVTASVVGFKG 194


>gi|260911408|ref|ZP_05917999.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634455|gb|EEX52554.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
          Length = 686

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 34/145 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I+     +   +D       PE+   L ++ ++L  +    I +  H D   +R     N
Sbjct: 512 ITAPVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCD---YRGTPEYN 568

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMN-------------- 328
             L+  RA +    L+++G++  R++ + G+   +                         
Sbjct: 569 KTLAQHRANAVVHYLIEAGIAPQRLTPM-GYGKEKPKTIRKKLTERYKWLKEGDVLTEDF 627

Query: 329 -------------SANRRIDILVED 340
                          NRR + +V+ 
Sbjct: 628 ITKLDKDKQEICNQLNRRTEFVVQR 652


>gi|107101995|ref|ZP_01365913.1| hypothetical protein PaerPA_01003042 [Pseudomonas aeruginosa PACS2]
          Length = 461

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377

Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 378 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460


>gi|210135285|ref|YP_002301724.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           P12]
 gi|210133253|gb|ACJ08244.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           P12]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|146276382|ref|YP_001166541.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554623|gb|ABP69236.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 730

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 88/281 (31%), Gaps = 17/281 (6%)

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           A+    N   + +  +   +  +++    S     D  +    ++         + +   
Sbjct: 451 AVGAMLNNRDEVVSNSGDRVVVQRSDGTYSVLKDDDTLLRRPGSEVVTQSFDDGSTRAVV 510

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
            +     I  + +       + ++ RD  + + +     +E+          P  S  + 
Sbjct: 511 TRADGTQIVTIRDGAGRVLRRTAIDRDGREVRLIDDLAPVERVDVSRLPEPAPGFSFVET 570

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +  ++  + A            D           R    ++     +   F   S+ 
Sbjct: 571 TNGRELRQALEQA-------RSRTLDRTYSLRQIREYREVRALAPAIDVDQITFATGSAA 623

Query: 244 PLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             P     L  +G+ +A        EV  I GHTDA         N  LS  RA S    
Sbjct: 624 IDPGQAERLAVLGQTIADMVAERPGEVFLIEGHTDAV---GDEASNLALSDRRAESVALA 680

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           L +   V  + +  + G+    L+I +D     NRR+ + +
Sbjct: 681 LSEYFDVPPENMV-VQGYGEGDLRIDTDGPEQRNRRVAVRL 720


>gi|108563489|ref|YP_627805.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           HPAG1]
 gi|107837262|gb|ABF85131.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           HPAG1]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.]
          Length = 360

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           ++  V+    +G         ++    +  +   F    +   P+    L  I   +A  
Sbjct: 213 INAGVSYRFGQGAAPVVAAPEVVSKTFNLNSDVNFAFGKANLKPQAQAALDGIYGEIAQV 272

Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               +++ G+TD          N +LS  RA +     +  GVS D IS  +G+      
Sbjct: 273 NSAKVAVAGYTDRI---GSDAFNVKLSQQRAETVANYFVAKGVSADAISA-TGYGKANPV 328


>gi|294140499|ref|YP_003556477.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293326968|dbj|BAJ01699.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 197

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  SS+   E  + L K+  ++      + I+GHTD   ++     N  LS+ RA +  
Sbjct: 94  FDFDSSLLKDEDKMELDKLIALVNSLDGKLVIKGHTD---YQGSNAYNENLSMRRARTIQ 150

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
             L       +    +  F   +  I S     N+ NRR  ++  ++
Sbjct: 151 DYLEGQLTQGEYEYSVEHFGELQPIIESHTLQANALNRRAMVIFTEK 197


>gi|296122828|ref|YP_003630606.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
 gi|296015168|gb|ADG68407.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
          Length = 296

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86
              G+WK+ YADF+T +MAFFLVMW++  + +    A+  YF P             + 
Sbjct: 3  GGGGGAWKVAYADFVTAMMAFFLVMWLVGQSKEVK-TAVAHYFQPPPGAAAAELDPDVEP 61

Query: 87 QNPPERSSQN 96
             P R+   
Sbjct: 62 SLFPPRAELK 71



 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 6/110 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDR 291
             +F + +       I  L+ +   L      I IRGH       +     D W+LS  R
Sbjct: 85  MVLFAEKAYALDESAINQLEALLPDLLGKPNKIEIRGHASRRERADTQTKEDPWQLSWMR 144

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILV 338
           + +    L+  GV   R+ ++S         A        + N R+++ +
Sbjct: 145 SQAVKDFLVSKGVELGRL-RLSQDGAEEPYSAKKLDAEHQAQNARVEVFL 193


>gi|296389028|ref|ZP_06878503.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa PAb1]
          Length = 461

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377

Query: 255 IGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 378 LLDYLRQNQKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460


>gi|313107451|ref|ZP_07793639.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa 39016]
 gi|310880141|gb|EFQ38735.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa 39016]
          Length = 461

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377

Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 378 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460


>gi|218676771|ref|YP_002395590.1| hypothetical protein VS_II1010 [Vibrio splendidus LGP32]
 gi|218325039|emb|CAV26876.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 751

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 14/175 (8%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +     + + ++  K  L    K +    + L        +   T           + 
Sbjct: 535 ATVQQPGMKSLASIGDKALLNAETKALEQLKNLLPNLGDSDELSLNTEVKKGQHIFELRS 594

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLD 290
            T  FD+ S+    +    L ++G +L+     I  +I+GHT +         N  LS +
Sbjct: 595 TTFAFDR-SNSDNRKARDSLIELGGILSQIHRPIPITIKGHTCSR---GSIEYNQTLSEE 650

Query: 291 RAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA    +  +  G++ ++       +  G       + +D       NRR+D+L+
Sbjct: 651 RAIYIRE-CILEGITSNQAAWKTCIRTIGLGERDPLVPNDSEDQRRRNRRVDLLL 704


>gi|90407927|ref|ZP_01216101.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
 gi|90310941|gb|EAS39052.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
          Length = 304

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+   S    +    L      LA     I I GHTD    +  A  N  L+  RA +  
Sbjct: 189 FEFDKSQLAEKDKKTLDAFINKLAGLNGRILIAGHTD---IQGAADYNQALATFRARAVE 245

Query: 297 QVLMKSGVSEDR-ISKISGFAHHRLKI--ASDPMNSANRR 333
           + L ++ +   + I +++ F   +      +   N++NRR
Sbjct: 246 KYL-RNKLDASQFIWEVTSFGESKPIDVKHNALANASNRR 284



 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 3/90 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F              +      +      I+I GHTD    +   + N  LS  RA +  
Sbjct: 60  FKFDKYDLQASDQASIDLFIREIKDLKGRIAIVGHTD---VQGSLKYNVHLSAQRAQTIK 116

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP 326
             L K    ++   +I  +   +       
Sbjct: 117 DYLSKQLEVKNYDWEIKYYGETKPLSTQKT 146


>gi|332673924|gb|AEE70741.1| peptidoglycan associated lipoprotein [Helicobacter pylori 83]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|261839857|gb|ACX99622.1| hypothetical protein HPKB_1056 [Helicobacter pylori 52]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177


>gi|291437526|ref|ZP_06576916.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291340421|gb|EFE67377.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 218

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 19/194 (9%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           + T  +++   +   T+   S   E +   P L       +   K L D+ + +      
Sbjct: 33  ATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVL-DIKQVVEDQSGD 91

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264
              ++    V F              +   +F K S+    +    +  I E +   +  
Sbjct: 92  ERREDTNSDVKFAL------------QAEVLFGKDSAKLGAQAKARIATIAEEIKTQNAT 139

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            I + G TD       +     LS  RA + + VL +     D   ++ G+        +
Sbjct: 140 RIRVFGFTDNL---GSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADN 196

Query: 325 DPMNSA--NRRIDI 336
                   NRR++I
Sbjct: 197 STEAGRKKNRRVEI 210


>gi|86130146|ref|ZP_01048746.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818821|gb|EAQ39980.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 431

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 67/221 (30%), Gaps = 7/221 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            K +      +   ++  Q  +        +++                      +   +
Sbjct: 215 GKAEKHADWYSSNNVAQEQIEDLQNRLAKVETDLIDTDQDGVADYLDREPNTVSGVAVNT 274

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           K   +   +     +L   + +  +   +D         +    I   I D      F  
Sbjct: 275 KGVAVDQNKNGVPDELESTLDNRYAK-KSDIPTSTPAIASGDDVIKKLIEDGYVNVYFQF 333

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +S+ P   ++  +  + + +  +      + G+ D       A  N RLS  RA     +
Sbjct: 334 NSTKPETYSLESINYLIKYMTENAGASAQLVGYADEI---GNASTNQRLSERRAQKVKDI 390

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRIDILV 338
           ++ +G+S  R++  +G         +  P     RR+   +
Sbjct: 391 MVAAGISASRLTA-TGNGEDASVDKNSAPARQLVRRVTFKL 430


>gi|325134964|gb|EGC57596.1| ompA family protein [Neisseria meningitidis M13399]
 gi|325136954|gb|EGC59551.1| ompA family protein [Neisseria meningitidis M0579]
 gi|325145176|gb|EGC67458.1| ompA family protein [Neisseria meningitidis M01-240013]
          Length = 242

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184


>gi|254240978|ref|ZP_04934300.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
 gi|126194356|gb|EAZ58419.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
          Length = 464

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380

Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463


>gi|329904214|ref|ZP_08273697.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548110|gb|EGF32831.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 174

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           + +  FD  S +   E   VL+     L+ +     I +G+TD          N  L   
Sbjct: 69  KRSVYFDYDSYVVKAEFKSVLEAHARYLSANKSRKIIIQGNTDDR---GGREYNLALGQK 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           R+ +  Q +   GV+++++  +S     + K         + NRR DI+
Sbjct: 126 RSEAVRQAMSLMGVADNQLEAVS-LGKEKPKATGSDEAAYAENRRADIV 173


>gi|325202801|gb|ADY98255.1| ompA family protein [Neisseria meningitidis M01-240149]
          Length = 242

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184


>gi|254805583|ref|YP_003083804.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
 gi|254669125|emb|CBA07752.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
          Length = 242

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184


>gi|15676296|ref|NP_273431.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
 gi|304386635|ref|ZP_07368919.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
 gi|60416397|sp|P0A0V3|OMP4_NEIMB RecName: Full=Outer membrane protein class 4; Flags: Precursor
 gi|7225603|gb|AAF40822.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
 gi|304339285|gb|EFM05361.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
 gi|316984886|gb|EFV63842.1| ompA family protein [Neisseria meningitidis H44/76]
 gi|325128875|gb|EGC51731.1| ompA family protein [Neisseria meningitidis N1568]
 gi|325141028|gb|EGC63534.1| ompA family protein [Neisseria meningitidis CU385]
 gi|325199575|gb|ADY95030.1| ompA family protein [Neisseria meningitidis H44/76]
 gi|325203490|gb|ADY98943.1| ompA family protein [Neisseria meningitidis M01-240355]
          Length = 242

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184


>gi|311278468|ref|YP_003940699.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
 gi|308747663|gb|ADO47415.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
          Length = 160

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 6/112 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  +      ++   +  +   LA +      + GHTD          N  LSL R
Sbjct: 52  DKILFSTNDYQLNTQSRQQIAAMASRLAATGITHARMDGHTDNY---GEDSYNEALSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           A        +            G        ++        NRR+ I++ + 
Sbjct: 109 ADRVADAWAEGARIPRGNLTTQGLGKKYPVASNATAQGRSENRRVTIVISEP 160


>gi|289673872|ref|ZP_06494762.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
          Length = 447

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P    + ++   +    Q +  +       +    +            +       
Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L       + +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             RA +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|148554155|ref|YP_001261737.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
 gi|148499345|gb|ABQ67599.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
          Length = 196

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + ++   PE+   L  + + ++      + + G+TD       A  N RLS  RA   
Sbjct: 95  FLEGTTELTPESQPGLAFLIKEVSERPGAEVQVTGYTDTL---GEADANDRLSQQRAEEV 151

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
             VL K G+    +S + G     L++A+       ANRR+ + + 
Sbjct: 152 LGVLAKQGIDPTLMSAV-GRGERNLRVATPDGVSEPANRRVVVTIR 196


>gi|91776690|ref|YP_546446.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gi|91710677|gb|ABE50605.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 180

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            +    FD  S     E   +++   + L  ++   + ++G+TD          N  L  
Sbjct: 71  SKRNVYFDFDSDAIKAEFRPLIEAHAQYLNSNSGAKVFLQGNTDER---GTREYNLSLGQ 127

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            RA +  +VL   GV + +I  +S F   +   +   D     +RR++ +
Sbjct: 128 RRAVAVKKVLNLLGVQDTQIETVS-FGKEKANTSCVDDTCWQQDRRVEFV 176


>gi|15597744|ref|NP_251238.1| hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
 gi|9948606|gb|AAG05936.1|AE004682_8 hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
          Length = 464

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380

Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463


>gi|330901158|gb|EGH32577.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 451

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P    + ++   +    Q +  +       +    +            +       
Sbjct: 285 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 344

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L       + +++ G  DA      A     LS
Sbjct: 345 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLNQHVTLVGFGDAKSDPERAAL---LS 401

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             RA +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 402 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 451


>gi|261838454|gb|ACX98220.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           51]
 gi|315587014|gb|ADU41395.1| peptidoglycan associated lipoprotein [Helicobacter pylori 35A]
 gi|317178572|dbj|BAJ56360.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           F30]
 gi|317182379|dbj|BAJ60163.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           F57]
          Length = 179

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|317406287|gb|EFV86528.1| OmpA/MotB domain-containing protein [Achromobacter xylosoxidans
           C54]
          Length = 240

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 13/216 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ--------SEHCKNSLTRDSEKGKD 156
            +   +V  + G                 L+  QQ         +     +       + 
Sbjct: 23  TVVPANVIPQPGQVVASGAVPDEATKADVLARLQQVYGVGNVIDQIEVGGVVAPPNWSEH 82

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
           + K               +       +  ++ +   Q +A   +++L+          V 
Sbjct: 83  VGKLIGQPLKQINRGQLEVDGTQIRLLGEVQNEASRQQIASTFATSLNPTYKIVNGLRVA 142

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDAS 275
                 G+L  ++  R    F+  S+        +L ++ +V+    ++ + I GHTD+ 
Sbjct: 143 AGKDEQGLLDKVLTNR-VVEFETGSATLTARGRELLDQVADVIPKLHSDKVQIIGHTDS- 200

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
                   N  LS  RA +    L+  G+   R   
Sbjct: 201 --SGSRSTNLALSQARADAVRAYLVDKGLPPGRFET 234


>gi|317177876|dbj|BAJ55665.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           F16]
          Length = 179

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177


>gi|291613389|ref|YP_003523546.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291583501|gb|ADE11159.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 163

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +      E + V+QK  E L      + +++G+ D        + N  L  +RA + 
Sbjct: 60  FDFNKYTVKSEYMNVIQKEAEFLKTHKNDVVTLQGNADER---GSEKYNLGLGENRADAV 116

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
            +VL K GV  D+I  +S     + ++          NRR+D L
Sbjct: 117 AKVLEKDGVPADQIKMVS-LGKDKPRLTCHKEKCWKENRRVDFL 159


>gi|307249694|ref|ZP_07531674.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858260|gb|EFM90336.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 164

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  E + + G+TD        + N  LS  R
Sbjct: 22  GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 78

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337
           A      L++ GV+ + I+ + G+   +   A D  P           NRR+++     +
Sbjct: 79  ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 136

Query: 338 VEDRQG 343
           ++  +G
Sbjct: 137 LKQNEG 142


>gi|325981317|ref|YP_004293719.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
 gi|325530836|gb|ADZ25557.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
          Length = 174

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            + +  +D  S     E   ++      L  +     I +G+TD          N  L  
Sbjct: 65  SQRSVFYDFDSYTVKSEYRELVLSHARFLRDNPAASVILQGNTDDR---GSREYNLALGQ 121

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            RA S   +++ SG  + +I  +S     + +     +   S NRR DIL
Sbjct: 122 RRADSVKNMMILSGAQDLQIESVS-LGEEKPRALGHGESTWSQNRRTDIL 170


>gi|116050492|ref|YP_790689.1| hypothetical protein PA14_31620 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891473|ref|YP_002440340.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa LESB58]
 gi|254235540|ref|ZP_04928863.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
 gi|115585713|gb|ABJ11728.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167471|gb|EAZ52982.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
 gi|218771699|emb|CAW27473.1| putative ABC-type periplasmic phosphate-binding protein
           [Pseudomonas aeruginosa LESB58]
          Length = 464

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +A+KI +           +          + ++         F + S++   + ++ +Q+
Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380

Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + + L  +    E   + G  D  P  +  R    LS  RA +  + L + GVS     +
Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434

Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338
           I+GF       ++D       NRR+++ V
Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463


>gi|258591277|emb|CBE67574.1| OmpA/MotB domain protein precursor [NC10 bacterium 'Dutch
           sediment']
          Length = 214

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    ++  ++ +  E     +   ++I GH+D       +  N  L   RA +A
Sbjct: 111 FDFDQSAIRDDSKKLMDENVEWFRQHSAARVTIEGHSDER---GSSEYNLALGERRARAA 167

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
              L+ +G++ +RI  IS F   R  ++   +     NRR
Sbjct: 168 RDYLVAAGIAANRIGTIS-FGKERPFVSGHDESTWRWNRR 206


>gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
 gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
          Length = 373

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 18/117 (15%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD + S+  P     L ++   L  +  + I + GHTD          N +LS  RA
Sbjct: 255 DSLFDFNKSVVKPAGKRALDQLARDLNGTDYDQIMVIGHTDRI---GSHAYNLKLSTRRA 311

Query: 293 YSAYQVLMKSG-VSEDRISK--ISGFAH--HRL---KIASDPMN-----SANRRIDI 336
            +    L+ SG +   +IS   + G A    +      +            +RR+++
Sbjct: 312 EAVKDYLISSGQIPAHKISAKGVDG-ADPVTKPGDCVGSKATPALIACLQPDRRVEV 367


>gi|150003007|ref|YP_001297751.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
 gi|319642207|ref|ZP_07996867.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
 gi|149931431|gb|ABR38129.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
 gi|317386193|gb|EFV67112.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
          Length = 399

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            ++        +E+  +  T           +  +     +      P +     L   +
Sbjct: 196 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 255

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     +       L A    +     T +  +   I     +  F   S++    +
Sbjct: 256 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 314

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            V LQ+I +++  +    + + G+ D+      A  N +LS DRA +    L+K GV+++
Sbjct: 315 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 372

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336
            +  ISG       + +    + NRR+ I
Sbjct: 373 NLI-ISGMGG----VNTLTPPAFNRRVII 396


>gi|327189144|gb|EGE56328.1| hypothetical protein RHECNPAF_7150015 [Rhizobium etli CNPAF512]
          Length = 429

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             LPP    +   +    ++   + ++ + L   + + +   V        I++ I   R
Sbjct: 264 ATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIREGL---VTVSEDPQQIVVII---R 317

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291
            + MFD +S       + +L +IG  L   +  + + GHTDA P ++     N  LSL R
Sbjct: 318 ASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAIPVQSLAFPSNDSLSLAR 377

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           A +A +++        R+ +  G        ++      + NRRI I++   Q
Sbjct: 378 ASAAAEIIKSMMNDPGRV-REEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 429


>gi|237707997|ref|ZP_04538478.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
 gi|265754217|ref|ZP_06089406.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
 gi|229457983|gb|EEO63704.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
 gi|263234926|gb|EEZ20481.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
          Length = 395

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            ++        +E+  +  T           +  +     +      P +     L   +
Sbjct: 192 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 251

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     +       L A    +     T +  +   I     +  F   S++    +
Sbjct: 252 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 310

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            V LQ+I +++  +    + + G+ D+      A  N +LS DRA +    L+K GV+++
Sbjct: 311 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 368

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336
            +  ISG       + +    + NRR+ I
Sbjct: 369 NLI-ISGMGG----VNTLTPPAFNRRVII 392


>gi|154245935|ref|YP_001416893.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
           Py2]
 gi|154160020|gb|ABS67236.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
          Length = 220

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRT 222
            ++   +       +    +    +  + D+ +  +  L GL   ++             
Sbjct: 35  PALVGVQPAAAQVFTPNAEIVQGLQTSVDDVPQVSAEALRGLAQAHMKYTGPPESRPPLA 94

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRN 279
             L  +       +FD +S++  PE+   L  I + + +         + G+TDA+    
Sbjct: 95  AQLDQLAQINVEIVFDLNSAMIKPESYRTLGSIADAMHNPVLLGYKFLVVGNTDAT---G 151

Query: 280 IARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
               N +LS +R+ +  + L     V   R+  + G     L+    P  + NRR+ I  
Sbjct: 152 TRELNMKLSQERSDAVVEALSTTFRVDPRRLQSV-GLGEEALQDPKHPDAAINRRVQIYN 210

Query: 339 EDRQG 343
             R G
Sbjct: 211 VGRAG 215


>gi|153877197|ref|ZP_02004126.1| Outer membrane protein A [Beggiatoa sp. PS]
 gi|152066338|gb|EDN65873.1| Outer membrane protein A [Beggiatoa sp. PS]
          Length = 148

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRL 287
           + N   F+   +    +   +L  +   +         I I GH D+SP         +L
Sbjct: 39  EDNRITFEPGKATLTDQVKSILDTLAAKICLEIAHINAIVITGHADSSP---TDNYKQKL 95

Query: 288 SLDRAYSAYQVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           SL RA +    L      +++D++    G A      A     + NRR++I V  + 
Sbjct: 96  SLARAVAVADYLKSRCPALTDDKLIT-KGLADQYPLSADS---AKNRRVEIRVMKKN 148


>gi|118578838|ref|YP_900088.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501548|gb|ABK98030.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 687

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
           ++ ++    +FD +          ++ KI        +  +SI GHTD          N 
Sbjct: 569 NVQEKYALILFDFNKDTVSGLNQEIVNKIVTRFKSLPQASMSIVGHTDNI---GSESYNL 625

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +LS  RA + Y++L    G       + SG         +        NR + I +E
Sbjct: 626 KLSQRRAAAVYKLLTAAYGEPVGERIRFSGVGQGSPLFDNQTPEGRAFNRTVTITLE 682



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 13/119 (10%)

Query: 226 ISIIDQRNTPMFDKSSS-IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283
           +   +   T  FD+ +      +   +L  IG+ LA +    I++ G  D        + 
Sbjct: 337 VRFHEASATEGFDEQTFRDTTEKYHQILNIIGKRLADTPGATITLVGCNDN---SGAEKG 393

Query: 284 NWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDIL 337
              LS  RA +    L     ++ +RI +I     +  K+ S        + NRR++I+
Sbjct: 394 KTGLSTRRAEAVKTYLGTIWNIAPERI-RIEAR--NLPKMPSSSSSQEGQAENRRVEIV 449


>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 365

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 9/116 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
           I + +     +F+  SS      +  LQ I   L    +   I RG++D+      +  N
Sbjct: 244 IELEEVTFPVLFNFDSSEL--FFVDSLQIIINRLIQFPQATVILRGYSDSQ---GSSEYN 298

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             LS  R  S  Q L + GV   +I     +                 NRR+ +L+
Sbjct: 299 LALSKRRTDSITQYLTEHGVKPQQIIA-EHYGEQYPVTDKISEQHKHLNRRVQVLL 353


>gi|262198303|ref|YP_003269512.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262081650|gb|ACY17619.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 170

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285
             I+  +   F   S+   P     L+ +   L  + E  + I GH D       A  N 
Sbjct: 57  EQIEPESRVFFALDSAELTPLAQSELEDVAAWLVDNEERELVIEGHADPQ---GAADYNQ 113

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            LS  RA + YQ L+  G+  +R+ +   F       A +   S NRR
Sbjct: 114 ELSEKRAIAVYQFLLDQGIPAERMER-RAFGESE---ADEAPYSINRR 157


>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
          Length = 369

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 9/116 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
           I + +     +F+  SS      +  LQ I   L    +   I RG++D+      +  N
Sbjct: 248 IELEEVTFPVLFNFDSSEL--FFVDSLQIIINRLIQFPQATVILRGYSDSQ---GSSEYN 302

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             LS  R  S  Q L + GV   +I     +                 NRR+ +L+
Sbjct: 303 LALSKRRTDSITQYLTEHGVKPQQIIA-EHYGEQYPVTDKISEQHKHLNRRVQVLL 357


>gi|73920657|gb|AAZ94164.1| OpcL [Burkholderia sp. BC92]
          Length = 139

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   ++Q+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 42  FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 98

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
            + +   GV++ ++  +S     + +     +   + NRR
Sbjct: 99  RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRR 137


>gi|330982164|gb|EGH80267.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 447

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P    + ++   +    Q +  +       +    +            +       
Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L       + +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             RA +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|209809438|ref|YP_002264976.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
 gi|208011000|emb|CAQ81413.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
          Length = 307

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 5/99 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+   S         L +    +      I+I GHTD   ++     N  LS  RA S  
Sbjct: 62  FEFDKSELKETDYASLNQFVNSIKRFKGRIAIVGHTD---YQGSVSYNEELSRQRAESIK 118

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
             L +  V  +   ++  +   R  I       N+ANRR
Sbjct: 119 AYLSEKLVVSNYEWEVKYYGEKRPFIKGRSLEANAANRR 157



 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 12/146 (8%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
                 ++        +   +    L    +  + +++        F            V
Sbjct: 150 EANAANRRAYLVFEQTIDKELNPACLPPEPKRKVYVTMASH-----FAFDKDELQNTDKV 204

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-I 309
            L ++   L   T  I I GHTD   ++     N +L+ +R+ +    L K+ V   + I
Sbjct: 205 ELDELALKLTGLTGRILIAGHTD---YQGSQSYNEQLAKERSMAVQNYL-KTKVDPSQFI 260

Query: 310 SKISGFAHHRLKIASDP--MNSANRR 333
            +I  F      I       N+ANRR
Sbjct: 261 WEIKSFGEDSPIIEERSLKANAANRR 286


>gi|52425200|ref|YP_088337.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307252|gb|AAU37752.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 272

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 15/113 (13%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD            V+  + E L  S  + + + G TD          N  LS  RA
Sbjct: 139 DFLFDFDKDSLTERGKKVVDSVAEQLKASKAKTVKVAGFTDRL---GSEAYNLELSQRRA 195

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA--------NRRIDI 336
               + L+   V  D I  I G+   +     +              NRR++I
Sbjct: 196 NQVKEWLIARDVKAD-IDAI-GYGSAQQIKPCTGLKAGKALRDCLRPNRRVEI 246


>gi|296101384|ref|YP_003611530.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055843|gb|ADF60581.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 313

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 96/301 (31%), Gaps = 21/301 (6%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           ++    A   +  K +           +  + G    Q     +        I  +  + 
Sbjct: 23  ILISSTAYSAERVKHVID-----IPEDVKTTSGKTAPQPYRPVADVTPELAQIVVYYPEG 77

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
           SV   I   +++ Q   L      L  +  +   ++                 L     +
Sbjct: 78  SVPATIY-VDRELQSVLLPGQFTVLCAAPGAHAVESWFNDHPAYQGKQNPLQQLNAESAQ 136

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                + P +     A++ + R + L  K+       + +   +    +      ++ I 
Sbjct: 137 TYFIQVNPGTSGNTAALEERSRAEALLSKMHKQTK--IINRASQVKTCDYINNSGVVLIQ 194

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287
           +Q        +++    E+   L ++ +    +     I I G+TDA         N RL
Sbjct: 195 EQVLFRFAASNAAGIFAESRNKLDEVVKFTKKANNVSEIQIVGYTDAI---GSREANQRL 251

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----N---RRIDILVE 339
           S  RA +   +L++ G+  + I+  +G    +         S      N   RR++ILV+
Sbjct: 252 SEARADTVRSLLIEKGIKPELINNTTGKGIAQSAEGCGTSASQQAAGCNVNSRRVEILVK 311

Query: 340 D 340
            
Sbjct: 312 S 312


>gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
           202]
 gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
           202]
          Length = 344

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 18/124 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +F    S   P     L      +         I + G+ D          N +LS 
Sbjct: 221 SDVLFAFGKSXLKPAAAQALDAANNEINALGLANPAIQVNGYXDRI---GKZXXNLKLSQ 277

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338
            RA +    L+  G +   ++ + G+        +               + +RR+++ V
Sbjct: 278 RRAETVANYLVSKGQNXANVTAV-GYGXANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 336

Query: 339 EDRQ 342
           +  +
Sbjct: 337 QGSK 340


>gi|77459872|ref|YP_349379.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
 gi|77383875|gb|ABA75388.1| phosphate ABC transporter substrate-binding protein, PhoT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 444

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 91/300 (30%), Gaps = 20/300 (6%)

Query: 53  IINATDDDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
            +N  + +    I     + +   G    T      D+Q+    + +  +     + ++ 
Sbjct: 150 SLNQLNTEQLARIFSGEAKTWEDVGGKGGTIHLYARDDQSGTYDTFKELVLSRRGKSLSN 209

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK--STDLEKS 166
            +   +             +   F      +       +   S+    L    +T+    
Sbjct: 210 AAKRFESSEQLSDAVSADPQAIGFIGLPYVRQAKAVAIVDGQSQAMLPLASLIATEDYPL 269

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS---TLSGLVADNIVKGVLFETTRTG 223
             +   Y  P  +     A+    + +     +++       + A  +    L       
Sbjct: 270 SRRLFFYLPPDSNNPWARALVEFAQSRQGQAIVAANGFIAQTVQAIAVTPNALMPEGYQS 329

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNI 280
           +            F++ S+    +    L ++ + + H  +      + G  DA      
Sbjct: 330 LSRHAQRLTVNFRFEEGSASLDNKARQDLARVFDYIKHHDKTDRAVTLVGFGDAKDDPAR 389

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           A     LS  RA +  + L+K+GV    + ++ GF        +  D     NRR+++ V
Sbjct: 390 ADL---LSKLRAMAVRRELVKNGVV---LREVRGFGALMPVATNSGDEGRIKNRRVEVWV 443


>gi|170739243|ref|YP_001767898.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168193517|gb|ACA15464.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 210

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +SS      +  +  +G  LA        I I GHTD    +   R N RLS  RA 
Sbjct: 99  FAYNSSKIGHGALAQVSALGASLARPELRDSTILIVGHTD---GKGSDRGNQRLSERRAR 155

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           +    +++  GV+   +  + GF    LK A++P  +ANRR+
Sbjct: 156 AVKDYIVRHYGVAAGNLIGV-GFGKSHLKEAANPYAAANRRV 196


>gi|194336954|ref|YP_002018748.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309431|gb|ACF44131.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 519

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S +        + +I  VL+          + G  DA       + N  L+  RA 
Sbjct: 418 FRADSEVLDTRANRDIGRIVAVLSQPKYKDKRVVLIGFADA---AGSIKHNKELAQKRAE 474

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
                L++ GV   + ++++G         +D       NRRI++ V+
Sbjct: 475 VVATALIEEGV---QCAEVTGVGAEAFVAPNDTQENREKNRRIEVWVK 519


>gi|212690547|ref|ZP_03298675.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
 gi|254883655|ref|ZP_05256365.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
 gi|294775642|ref|ZP_06741150.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|212666896|gb|EEB27468.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
 gi|254836448|gb|EET16757.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
 gi|294450486|gb|EFG18978.1| OmpA family protein [Bacteroides vulgatus PC510]
          Length = 401

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            ++        +E+  +  T           +  +     +      P +     L   +
Sbjct: 198 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 257

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     +       L A    +     T +  +   I     +  F   S++    +
Sbjct: 258 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 316

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            V LQ+I +++  +    + + G+ D+      A  N +LS DRA +    L+K GV+++
Sbjct: 317 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 374

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336
            +  ISG       + +    + NRR+ I
Sbjct: 375 NLI-ISGMGG----VNTLTPPAFNRRVII 398


>gi|71908538|ref|YP_286125.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71848159|gb|AAZ47655.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 175

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
            + +  FD  SS    E   V +  G+ LA+     +++RG+TD          N  L  
Sbjct: 66  SKRSIYFDLDSSAIKQEYRSVAEAHGKFLANRPGVKVTVRGNTDER---GSREYNLALGQ 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332
            RA +  Q L   GV  D+I  +S +   +      ++   + NR
Sbjct: 123 RRADATKQALSAYGVVSDQIETVS-YGSEKPAAEGHNEAAWAKNR 166


>gi|261391899|emb|CAX49359.1| outer-membrane protein class 4 [Neisseria meningitidis 8013]
 gi|325132932|gb|EGC55609.1| ompA family protein [Neisseria meningitidis M6190]
 gi|325138919|gb|EGC61469.1| ompA family protein [Neisseria meningitidis ES14902]
          Length = 240

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 102 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 158

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 159 VANNLVSNGVPVSRISAV-GLGESQ 182


>gi|121635480|ref|YP_975725.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
 gi|161870687|ref|YP_001599860.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
 gi|218768845|ref|YP_002343357.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
 gi|60392859|sp|P0A0V2|OMP4_NEIMA RecName: Full=Outer membrane protein class 4; Flags: Precursor
 gi|120867186|emb|CAM10954.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
 gi|121052853|emb|CAM09205.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
 gi|161596240|gb|ABX73900.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
 gi|254670228|emb|CBA05418.1| outer membrane protein class 4 [Neisseria meningitidis alpha153]
 gi|254672496|emb|CBA05992.1| outer membrane protein class 4 [Neisseria meningitidis alpha275]
 gi|308388587|gb|ADO30907.1| outer membrane protein class 4 [Neisseria meningitidis alpha710]
 gi|319411080|emb|CBY91483.1| outer-membrane protein class 4 [Neisseria meningitidis WUE 2594]
 gi|325142982|gb|EGC65338.1| ompA family protein [Neisseria meningitidis 961-5945]
 gi|325198932|gb|ADY94388.1| ompA family protein [Neisseria meningitidis G2136]
 gi|325208795|gb|ADZ04247.1| ompA family protein [Neisseria meningitidis NZ-05/33]
          Length = 242

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184


>gi|153871121|ref|ZP_02000371.1| lipoprotein [Beggiatoa sp. PS]
 gi|152072413|gb|EDN69629.1| lipoprotein [Beggiatoa sp. PS]
          Length = 285

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 21/243 (8%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
                  + KK  Q+  N+   L+N    +  + +L+      K   K+           
Sbjct: 43  PPAQAEDSLKKATQKCPNHAPALNNLANIKEKQGNLSEALRLYKKAIKANSQFAYAYAGI 102

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              L      +  A   +K L    K  +         N    ++   +     +S    
Sbjct: 103 GDVLIKQRDYQKAAKFFQKFLTLQGKGNNVQEYKQKLKNAQNNIVVSASEIYQNLSTKRS 162

Query: 232 RNTP-------MFDKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRN 279
              P        F   SS          Q+I + +           I I GHTD      
Sbjct: 163 IGPPKVVDVPIQFPTGSSEIRGNAKRQCQEIAQAVRDVFKTDKNSKIRIEGHTDNQ---G 219

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNS--ANRRI 334
            A  N  LS  RA    + L+K   +  +R  ++ G+   +      +   +    NRR+
Sbjct: 220 KADYNRGLSAKRAKKIKEQLVKELNLPAERF-EVVGWGEEKPIARCNNGDEHGCFLNRRV 278

Query: 335 DIL 337
            ++
Sbjct: 279 TLV 281


>gi|291278017|gb|ADD91483.1| outer mebrane protein A [Riemerella columbina]
          Length = 326

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 21/251 (8%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                N   AS  +       +R     +D       T   V+ +             ++
Sbjct: 94  KSAVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLVEFQGCPDTDGDGVPDKDD 153

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N   ++   ++  C    +             D+       EN   P   ++    + + 
Sbjct: 154 NCPDVAGPAENNGCPWPDSDGDGVLDKDDACVDV---AGPAENNGCPWPDRDNDGVLDKD 210

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +  D+   +        ++   +                       F+ + +   PE+ 
Sbjct: 211 DKCPDVPGLVQYNGCPEPSEVTAERAT-------------GALQGIFFNFNKASIRPESD 257

Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L +  +++   +     + GHTDA   +  A  N +LS +RA S    L   GV+  +
Sbjct: 258 GKLDQAADIIKSSNGGTFLVTGHTDA---KGNANYNLKLSKERAASVVNALEARGVNASQ 314

Query: 309 ISKISGFAHHR 319
           +    G     
Sbjct: 315 LKS-RGVGSAE 324


>gi|300776237|ref|ZP_07086095.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300501747|gb|EFK32887.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 508

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 7/123 (5%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
                    + +        F+ + +   PE+   L     ++  +     + GHTD   
Sbjct: 355 VVKDHKETAVEVEKTLKDIYFNFNKATIRPESNEKLDLAASIIKENGGNYLLTGHTD--- 411

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR---LKIASDPMNSANRR 333
            +  A  N RLS +RA +    L   G++++ +    G           ASD    A+R+
Sbjct: 412 IKGNAAYNLRLSKERAAAVVGALESRGINKNVLKS-RGVGSAEATIPASASDAERMADRK 470

Query: 334 IDI 336
           + +
Sbjct: 471 VTV 473


>gi|25298554|pir||E84968 outer membrane protein A precursor [imported] - Buchnera sp.
           (strain APS)
          Length = 349

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 20/120 (16%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+   P +   L K+ + +           + GH D            +LS DRAY
Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYXQKLSEDRAY 289

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341
           S    L   G S D+I  + G         +                + +RR++I V   
Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347


>gi|157963679|ref|YP_001503713.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157848679|gb|ABV89178.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 404

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                D      +     T     +++ + T +++  S          +QK+ + +    
Sbjct: 264 QDQCLDTPSTHAVDSRGCTLFAPRVVEMKLTVLYENDSDKIDLSNTDKIQKLADFIEQYD 323

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            + I++ GHT A         N +LS  RA S  ++L         I K  G        
Sbjct: 324 IKQITVFGHTSAV---GSQAYNQKLSERRAASVAEMLAADFNIATGIIKAVGKGESEPI- 379

Query: 323 ASDPMNSANRRIDILVED 340
           +  P    NRRI++ + +
Sbjct: 380 SHIPE--QNRRIEVYLNE 395


>gi|292488104|ref|YP_003530981.1| putative type VI secretion system core protein [Erwinia amylovora
           CFBP1430]
 gi|292899316|ref|YP_003538685.1| outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291199164|emb|CBJ46278.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
 gi|291553528|emb|CBA20573.1| putative type VI secretion system, core protein [Erwinia amylovora
           CFBP1430]
 gi|312172236|emb|CBX80493.1| putative type VI secretion system, core protein [Erwinia amylovora
           ATCC BAA-2158]
          Length = 407

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290
               +F    +   PE   ++ ++   +      + I  +TD     +     N+  S  
Sbjct: 282 PADSLFSPPGTELTPEGRALIARVASAMESLKGTLLIAVYTDNRLLPSTQFTSNYEYSAA 341

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           +A +   ++M+         +  G A  R  + +      + NRR++I +
Sbjct: 342 QAQAISNMMMQLIAQPCINVRAEGRADSRELLPNSSAHNRAQNRRVEITL 391


>gi|316936147|ref|YP_004111129.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603861|gb|ADU46396.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
          Length = 216

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+ +S+    +    ++ +G+ L+          + GHTD+         N  LS  RA 
Sbjct: 106 FEYNSANISRQAAPAVEALGKALSSPDLKGATFVVAGHTDSV---GGEGFNQELSERRAD 162

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +  +VL++   ++   +  + G+   RLK  + P +  NRR+ ++    Q
Sbjct: 163 TIKRVLVEKYDIAGADLVTV-GYGESRLKDPAHPDSGVNRRVQVVNMSDQ 211


>gi|238755499|ref|ZP_04616838.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia ruckeri ATCC 29473]
 gi|238706255|gb|EEP98633.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
           [Yersinia ruckeri ATCC 29473]
          Length = 92

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I + GHTD+         N RLS  RA +    L   G+    I  + G         
Sbjct: 17  NHIRLNGHTDSM---GEDSYNDRLSYGRASAVADTLATIGMPRANID-VRGLGKLNPVAD 72

Query: 324 SDPM--NSANRRIDILVEDR 341
           +      + NRR+ ++V   
Sbjct: 73  NHTAKGRAENRRVAMIVTAP 92


>gi|167033093|ref|YP_001668324.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
 gi|166859581|gb|ABY97988.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
          Length = 435

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 51/171 (29%), Gaps = 11/171 (6%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
              P    + +    +    Q +  +       + A  +            +        
Sbjct: 270 PANPKPQSKALADFAQSPAGQAIVAQQGFVSQQIKAQPVPPQSDMPPRYRTLAQQAQRLS 329

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289
               F + S+    + +  +Q++ E L           + G  D       A     LS 
Sbjct: 330 VNFRFQEGSASLDNKALRDVQRVAEYLRQAGKLQSKAVLVGFGDPKETPGRAAL---LSR 386

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
            RA +  + L + GV    + +++G         ++       NRR+++ V
Sbjct: 387 LRAQAVRRELARDGVE---VLEVTGMGDELPVAGNELEQGRLRNRRVEVWV 434


>gi|254495661|ref|ZP_05108581.1| outer membrane protein [Legionella drancourtii LLAP12]
 gi|254355112|gb|EET13727.1| outer membrane protein [Legionella drancourtii LLAP12]
          Length = 235

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 12/143 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIVVLQKIG 256
            +     +   + +          I   D           F   S          LQ I 
Sbjct: 74  AVVNTGTNPKGRIIRTLQRCDIQFIQYGDTMTLNIPTDKYFMFESPRLNEINYKGLQNII 133

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
            +L    E  + + G TD            RLS  +A S    L  +G+   R+    G+
Sbjct: 134 ALLRLYPESHVYVAGFTDNV---GTEDHKKRLSQAQAESMMTYLWANGIQAQRLKP-EGY 189

Query: 316 AHHRLKIASD--PMNSANRRIDI 336
                   +     ++ NRRI+I
Sbjct: 190 GDKNTVADNALIHGSAMNRRIEI 212


>gi|298487201|ref|ZP_07005250.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158225|gb|EFH99296.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 408

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 14/165 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +    A+ R  +  +    ++ T+  L      +          +            F +
Sbjct: 253 QRWAQALVRFAQSAEGQAIVAQTVQALKVQPTAQM---PADYQALARKAERLSVNFRFAQ 309

Query: 240 SSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            S+    +    L+++ E L       + +++ G  DA      A     LS  RA +  
Sbjct: 310 GSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LSRLRAMAVR 366

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 367 RELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 408


>gi|34499026|ref|NP_903241.1| outer membrane protein A [Chromobacterium violaceum ATCC 12472]
 gi|34104876|gb|AAQ61233.1| outer membrane protein A precursor [Chromobacterium violaceum ATCC
           12472]
          Length = 226

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 28/130 (21%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSL 289
            +FD + S+   +    L  +   L           + + G+TD   F    + N  LS 
Sbjct: 90  VLFDFNKSVLRADAKNELDPLVAKLKAHAGKGYLNGVEVDGYTD---FMGSDKLNNALSQ 146

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSAN------------- 331
           +RA +     + +GV  ++++ I G      K+  +     P  + N             
Sbjct: 147 NRADAVKAYFVNAGVPAEKVTSI-GKGKAEAKMTEECKAKFPKYAKNKKQNAEIKACIES 205

Query: 332 -RRIDILVED 340
            RR+++ ++ 
Sbjct: 206 DRRVEVTIDA 215


>gi|332534220|ref|ZP_08410065.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036300|gb|EGI72771.1| 18K peptidoglycan-associated outer membrane lipoprotein
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 180

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     FD   +    +   +L+   E L  +  V   I GH D          N  L  
Sbjct: 74  QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNPSVKVLIEGHADER---GTPEYNIALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R  +  + L+  GVS  ++  +  +   +  + S   +  + NRR  ++
Sbjct: 131 HRGQAVEKYLLSLGVSASQM-SVVSYGEEKPMVKSRTESAFAKNRRAVLV 179


>gi|237725269|ref|ZP_04555750.1| major outer membrane protein OmpA [Bacteroides sp. D4]
 gi|229436535|gb|EEO46612.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4]
          Length = 395

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
            ++        +E+  +  T           +  +     +      P +     L   +
Sbjct: 192 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 251

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +     +       L A    +     T +  +   I     +  F   S++    +
Sbjct: 252 MDAINTALAQQIEQNRQLKAQLANQSTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 310

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            V LQ+I +++  +    + + G+ D+      A  N +LS DRA +    L+K GV+++
Sbjct: 311 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 368

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336
            +  ISG       + +    + NRR+ I
Sbjct: 369 NLI-ISGMGG----VNTLTPPAFNRRVII 392


>gi|254779677|ref|YP_003057783.1| Peptidoglycan-associated lipoprotein precursor; putative petide
           signal [Helicobacter pylori B38]
 gi|254001589|emb|CAX29646.1| Peptidoglycan-associated lipoprotein precursor; putative petide
           signal [Helicobacter pylori B38]
          Length = 179

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177


>gi|323529167|ref|YP_004231319.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323386169|gb|ADX58259.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 366

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +++      +  + ++     E   +    +         +RL D  +K    +   +  
Sbjct: 151 EAKTSPLFPQCQEAQRLTACSEVEMIHAGHEAWTRNFNESQRLVDAVEKGLPGIGTALGA 210

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--S 267
                 +         +++                LP     L ++   L    +V    
Sbjct: 211 CTPPVAVKAVPEIPPKMTLQADATFKFDRSDLGGMLPAGKAKLDQLVRDLKQVDDVTGIR 270

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP 326
           I G+TD          N +LS  RA +  + L   GVS        G       +  +D 
Sbjct: 271 IEGYTDRL---GSESYNRQLSTRRAETVKRYLQNGGVSTP--IAARGRGKDNPVVQCNDR 325

Query: 327 MNSA-------NRRID 335
              A       NRR++
Sbjct: 326 NRQALIDCLAPNRRVE 341


>gi|152984447|ref|YP_001351357.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
 gi|150959605|gb|ABR81630.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
          Length = 254

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 26/194 (13%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                L + ++   +    L+   +   + L   V     +G+  E +    ++SI +  
Sbjct: 45  EIQKELKERQVQFEQELVELKKAEQVRRTILDEAVEALRKRGIKVEVSENHTVLSIPNDL 104

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IAR 282
               FD  +            +IG+V+             + I I GHTD  P +  + +
Sbjct: 105 LG--FDTGAYDIHAAYQARALEIGKVINEVISREDRVEFLDTIFIEGHTDNRPLQGFMGK 162

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRI-----------SKISGFAHHRLK-IASDPMNS- 329
            NW LS  RA S +Q    +   ++++             +SG+   R   +     +  
Sbjct: 163 GNWGLSTFRAISLWQFWGSALSPDEQLARLKNKDGKPLFSVSGYGETRPVLVDQQTEDDF 222

Query: 330 -ANRRIDILVEDRQ 342
             NRRIDI    R+
Sbjct: 223 KRNRRIDIRFTIRR 236


>gi|330955558|gb|EGH55818.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 265

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 11/211 (5%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
            ++   S  +   K     D    K    +   +   + +  +     S +         
Sbjct: 27  WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDSKWWWPFGNDSAKDEPKALPMP 86

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249
             +     +      L A         E     + I+         F+      L P T+
Sbjct: 87  DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 143

Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             + ++ +V+       + I GH D          N ++S +RA S   +   SG+  +R
Sbjct: 144 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 200

Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           +S+  G      + A+D     + NRR++IL
Sbjct: 201 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 230


>gi|291612991|ref|YP_003523148.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
           ES-1]
 gi|291583103|gb|ADE10761.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
           ES-1]
          Length = 175

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  +  F              +Q  G  L  +    + + G+ D          N  L  
Sbjct: 66  EIRSVYFPFDVDAVQDGDRAAIQAHGAYLGKNDSVKVRVEGNADER---GSTEYNLALGQ 122

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337
            RA +  ++L+ SG    ++  +S F   + + A   +   S NRR DI+
Sbjct: 123 RRANNVKKLLVLSGAKASQVETVS-FGEEKPRCADHMESCWSQNRRADIV 171


>gi|225621015|ref|YP_002722273.1| putative peptidoglycan-associated outer membrane lipoprotein
           [Brachyspira hyodysenteriae WA1]
 gi|225215835|gb|ACN84569.1| putative peptidoglycan-associated outer membrane lipoprotein
           [Brachyspira hyodysenteriae WA1]
          Length = 243

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 7/166 (4%)

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL--SGLVADNIVKG 214
               T  +  I K++   +    KEK      + ++   A++    L  +  + +   + 
Sbjct: 44  QSTKTASKTYIQKDDITTVADPIKEKKEYTNTQAQVSKKAEEKKEELTNNDALEEEKPQV 103

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273
           +            I+   N   FD  S     E    + +I + L ++ ++   I GH+D
Sbjct: 104 IKQTEVIQKDDNEILLTANIISFDFDSYELKNEYNEGIDEICKYLNNNRDINLIIEGHSD 163

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           +      +  N  LS +RA + +  L+  G+ +DR+  I G+    
Sbjct: 164 SI---GDSNYNIYLSENRAKAIFDKLVDKGIDKDRLRYI-GYGSTH 205


>gi|330971267|gb|EGH71333.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 447

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P    + ++   +    Q +  +       +    +            +       
Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L         +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             RA +  + L+K GV+      I G         +  D     NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKRGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|319956779|ref|YP_004168042.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
 gi|319419183|gb|ADV46293.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
          Length = 490

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 27/181 (14%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           ++ I  +++++        I   +   + + + K +  +     + +S     +  +FDK
Sbjct: 300 EDLIARLRKQRARIKSLTGIRLKVIDALKETLGKRIAIDKKSGALRLS-----SKILFDK 354

Query: 240 SSSIPLPETIVVLQ----------KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            S+    E    L+               +    + I I GHTD+         N  LS 
Sbjct: 355 GSAELKEEAKAELKDTFEKYIAALMSNRAIRPYLDRIIIEGHTDSD---GGYLYNLELSQ 411

Query: 290 DRAYSAYQVLMKSGVSE----DRISKISGFAHHRLKIAS--DPMNSANRRIDI--LVEDR 341
            RA +    L+   +++     +    SG A+    I +  +   ++ RRI+I   + +R
Sbjct: 412 KRALAVMNYLLSLPIAQKYHLKKYLVASGRAYMDPIIKNGVEDKEAS-RRIEIKFTLRNR 470

Query: 342 Q 342
           +
Sbjct: 471 E 471


>gi|319902641|ref|YP_004162369.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319417672|gb|ADV44783.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 386

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 13/259 (5%)

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
           G        + +S      + DE++ + + D KI            + N  +  N +   
Sbjct: 137 GGPTANYSSKGTSFTNATTATDEYLLETNGDKKIRFGATAGLGLSYDINAKWAINLEGRV 196

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               S+  D+   +    +  L   +               +        +     +++ 
Sbjct: 197 GVTPSIFGDASDCRKAEATARLNLGV-AYTFGGKKFARVSNVDEDALNAEINKYRSELAQ 255

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L         +   T+  +    +       F   S+       V ++   +VL  
Sbjct: 256 AQADLANAKNALANVKPETKEVVKEVQVAGPRAIFFKIGSAKIDDYGKVNIELAAKVLKA 315

Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +++    I G+ D       A  N +LS  RA + Y  L+  GV +D++  + GF     
Sbjct: 316 NSDKKYKIAGYAD--KATGSASWNQKLSEKRAQAVYDALIAQGVDKDQLELV-GFGGTEN 372

Query: 321 KIASDPMNSAN--RRIDIL 337
                     N   R+ IL
Sbjct: 373 MF------GKNFLNRVVIL 385


>gi|126662707|ref|ZP_01733706.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
 gi|126626086|gb|EAZ96775.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
          Length = 283

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRL 287
            ++ ++  F+ +      E    +      +     E + I G+ D          N+ L
Sbjct: 21  DEEVHSIFFEFNKFNLKEEQADAVVAFVSKIDTSRIESVQIFGYCDDR---GKDAYNYTL 77

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILV 338
           S +RA +    L++ G+    I  + G         ++       S NRR+D++V
Sbjct: 78  STNRANTVKDKLIEKGIKSKIIITLEGKGRIMLDEDMQTNIPEARSKNRRVDVVV 132



 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 10/167 (5%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            E +     + R ++    +      +V +++    ++ T +   +I      +  +F++
Sbjct: 111 DEDMQTNIPEARSKNRRVDVVVNFKPIVVEDLKIPGVYSTIKKDRIIDDRIYLDHVLFER 170

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW-----RLSLDRAY 293
            SS    +    L +I   L         I+GH   +P       +       LS++RA 
Sbjct: 171 GSSQLTYKAKKELDRIALELHKYKNIHFEIQGHVCCTPTFQKEAIDRDTKKRELSINRAK 230

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             Y   +   +S+ R+    G+ + +       ++   RR+++L+  
Sbjct: 231 RVYNYFLMKRISKTRM-TFKGYGNTQSLKKGSTLD---RRVELLITK 273


>gi|239929192|ref|ZP_04686145.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 195

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 19/194 (9%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           + T  +++   +   T+   S   E +   P L       +   K L D+ + +      
Sbjct: 10  ATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVL-DIKQVVEDQSGD 68

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264
              ++    V F              +   +F K S+    +    +  I E +   +  
Sbjct: 69  ERREDTNSDVKFAL------------QAEVLFGKDSAKLGAQAKARIATIAEEIKTQNAT 116

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            I + G TD       +     LS  RA + + VL +     D   ++ G+        +
Sbjct: 117 RIRVFGFTDNL---GSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADN 173

Query: 325 DPMNSA--NRRIDI 336
                   NRR++I
Sbjct: 174 STEAGRKKNRRVEI 187


>gi|56460901|ref|YP_156182.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
           L2TR]
 gi|56179911|gb|AAV82633.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
           L2TR]
          Length = 298

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 238 DKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +  S      +   L++I + L   +  E++ +  +TD+   R     N  L+  RA   
Sbjct: 190 EADSEKLTLSSQRKLKQISDYLQVDNELELVLVDAYTDSLGARGP---NQELTEQRAKEI 246

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334
            Q  ++ G+  +RI  ++     R   ++D       NRR+
Sbjct: 247 QQFFVERGIDAERIKTVA-HGEDRPVKSNDNEINRQINRRV 286


>gi|291451540|ref|ZP_06590930.1| secreted protein [Streptomyces albus J1074]
 gi|291354489|gb|EFE81391.1| secreted protein [Streptomyces albus J1074]
          Length = 220

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            +  + D +           PP    +  A  +     +LA      +  +V +++    
Sbjct: 25  HVAHADDDDPVAPPGSTTSSPPPEISEDSAGLKLADGAELAPPKVLDIKSVV-EDLGGEE 83

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDA 274
             E T T +  ++  +    +F K S+   PE    +Q I E         + + G TD 
Sbjct: 84  RREDTNTDVKFALQAE---VLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDD 140

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                      +LS +RA + ++ L+K+ +  +   ++ G++       +        NR
Sbjct: 141 L---GSYEHGKKLSKNRADAVHEELVKT-LGPNVTYEVRGYSEDYPIADNSTEAGRMKNR 196

Query: 333 RIDI 336
           R+++
Sbjct: 197 RVEV 200


>gi|222086232|ref|YP_002544764.1| outer membrane protein [Agrobacterium radiobacter K84]
 gi|221723680|gb|ACM26836.1| outer membrane protein [Agrobacterium radiobacter K84]
          Length = 838

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 65/229 (28%), Gaps = 13/229 (5%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
            T  +    R+        +  Q                   +         ++    LP
Sbjct: 600 ETIDQPDGDRIITVRNRYGDIIQRSRVDADGREYVLFYSPELEQQPDHDDYFRDPGDSLP 659

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRN 233
           P+     L+        +        L     + + +       R    I         +
Sbjct: 660 PMRLLIPLSQYIIDTGTERDSDYYDFLREPPVEPVERIYSVNEVRYSARIRDKVRRIDLD 719

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           T  F   S+         L+ + + +        TE   I GHTDA      A  N  LS
Sbjct: 720 TITFATGSAEIPMSQASTLRGVADAIGQIIKKDPTETFLIEGHTDAV---GSAESNLILS 776

Query: 289 LDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
             RA S  +VL    GV  + +    G+    LK+ +      NRR+ I
Sbjct: 777 DQRAESVAKVLSDVYGVPPENLVA-QGYGEQYLKVNTQGPEQENRRVTI 824


>gi|300727149|ref|ZP_07060568.1| putative immunoreactive 42kD antigen PG33 [Prevotella bryantii B14]
 gi|299775693|gb|EFI72284.1| putative immunoreactive 42kD antigen PG33 [Prevotella bryantii B14]
          Length = 382

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 18/161 (11%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           + L    + +L  L  ++         + +   +  + +     +       +  F+   
Sbjct: 233 EALNALNQSQLDALNSQLEDA--NAENERLRGELEAKQSNQTSSVVYKSAPVSVFFNIGK 290

Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     + +V L+   +    +   I + G+ D+      A  N +LS  RA +  + L+
Sbjct: 291 TKIASSKDMVNLESFAKSAKENNNKILVTGYADSK--TGSAEYNQKLSQSRADAVVEALV 348

Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDI 336
           K GV +  +                        NRR  ++I
Sbjct: 349 KFGVDKS-MITTQAKGGVDDLSPVDN-------NRRATVEI 381


>gi|126730858|ref|ZP_01746667.1| OmpA domain protein [Sagittula stellata E-37]
 gi|126708574|gb|EBA07631.1| OmpA domain protein [Sagittula stellata E-37]
          Length = 318

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+    + I  L  + + L+ +     +  GHTDA+        N  +SL RA +A
Sbjct: 213 FRSGSTDLGGDDIASLDALAQYLSDNPTRRILFVGHTDAT---GSLEANRGVSLRRAQAA 269

Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L  +      RI    G  +     ++        NRR++ ++   +
Sbjct: 270 VAYLRSRHDTDAGRIGA-EGAGYLAPVASNLTAEGREANRRVEAVLISTE 318


>gi|217969212|ref|YP_002354446.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
 gi|217506539|gb|ACK53550.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
          Length = 170

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
            + +  FD  S +   E   +++     L  + ++   ++G+TD          N  L  
Sbjct: 60  SKRSVFFDFDSFVIKQEARPLIEAHARFLVQNPQMNMLVQGNTDER---GSREYNLALGQ 116

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            RA    Q LM  G  E +I  +S     + +      N  + NRR
Sbjct: 117 KRADVVKQALMLLGAKESQIESVS-LGEEKPRCEDRTENCYAENRR 161


>gi|126736760|ref|ZP_01752498.1| OmpA/MotB [Roseobacter sp. CCS2]
 gi|126713731|gb|EBA10604.1| OmpA/MotB [Roseobacter sp. CCS2]
          Length = 592

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F    ++   + I  +++I  ++  +        + G TD+        +N  L+  RA 
Sbjct: 483 FLTGQAVLDTKAIADIKRISSIVRSAEYEGYEVLVFGFTDSV---GTINNNIALAERRAQ 539

Query: 294 SAYQVLMK--SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +   VL+   +G+ +D    I G         +D       NRR+++ +  R
Sbjct: 540 TVKDVLIAENAGILDDETVSIFGMGPIAPVNCNDTSVGRDLNRRVEVWIRPR 591


>gi|260914077|ref|ZP_05920550.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
 gi|260631710|gb|EEX49888.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
          Length = 275

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 17/116 (14%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD        +   V+  +   L  S  + + + G TD       A  N  LS  R
Sbjct: 138 GDFLFDFDKDALTAKGKEVVDSVATQLKSSGAKEVKVAGFTDRL---GSAAYNLDLSQRR 194

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA--------HHRLKIAS--DPMNSANRRIDIL 337
           A      L++ GV+ + I+ + G+                   D +   NRR++I 
Sbjct: 195 ANRVKARLIEQGVNAN-INAV-GYGKAQQVKACEEYPFGKQLKDCLRP-NRRVEIT 247


>gi|312961750|ref|ZP_07776248.1| phosphate transport system substrate-binding protein [Pseudomonas
           fluorescens WH6]
 gi|311284009|gb|EFQ62592.1| phosphate transport system substrate-binding protein [Pseudomonas
           fluorescens WH6]
          Length = 443

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 14/160 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
               + + +      I+  +  +  +              I            F++ S+ 
Sbjct: 292 AQSGKGQAIVAANGFIAQQVQAMAVE---PRASMPEDYQAIARDAQRLSVNFRFEEGSAS 348

Query: 244 PLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
              +    L+++   L    +    +++ G  DA      A     LS  RA +  + L+
Sbjct: 349 LDNKARQDLRRVVAYLKGHDKLDKQVTLVGFGDAKNDPQRAAL---LSKLRAMAVRRELV 405

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           K+GV    + +I GF       A+        NRR+++ V
Sbjct: 406 KNGVV---LREIRGFGAQMPVAANTADEGRIKNRRVEVWV 442


>gi|260467234|ref|ZP_05813410.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259029009|gb|EEW30309.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 403

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260
                +      + +     I+     +T  F+  SS      +  LQ + + +      
Sbjct: 257 ERVQRLYSINEVKRSARVRDIARRIDLDTLNFEFGSSSISDTEVQKLQGVADAMEKLLKK 316

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319
           +  E   I GHTDA         N  LS  RA +  + L  + G+  + ++   G+    
Sbjct: 317 NPAETFLIEGHTDAV---GTPEANLALSDRRAEAVAEALTNAFGIPAENLTT-QGYGEEY 372

Query: 320 LKIASDPMNSANRRIDI 336
           LK+ +   N  NRR+ I
Sbjct: 373 LKVDTSAPNRENRRVAI 389


>gi|146281899|ref|YP_001172052.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
 gi|145570104|gb|ABP79210.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
          Length = 229

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 11/167 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               ++K          +     +      L    +      E     ++++        
Sbjct: 40  SSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFEVERRDNVLVVT---APVDS 96

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            F+      L    +        L        + I GH D++        N  +S +RA 
Sbjct: 97  SFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADST---GADDVNRTISRERAS 153

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +   +   SG   DR+ +I G      + A+D       NRR+++++
Sbjct: 154 AVAAIFRLSGFKHDRL-RIRGLGSDMPRAANDSKEGRAMNRRVEMVL 199


>gi|89067611|ref|ZP_01155065.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
           granulosus HTCC2516]
 gi|89046581|gb|EAR52636.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
           granulosus HTCC2516]
          Length = 675

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 16/233 (6%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
              +    +   +   +     ++   +   + ++       R    G  +    D    
Sbjct: 442 QPGAEVQTVSFADGSTRTIVTRDDGSQVVTIRAADGTVVRRERIMPDGTRVILFDDTTDV 501

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
              +            +     +  L  LA   +S         I +          I +
Sbjct: 502 APVDVTALPDAPQPRDVSLSDEEALLAALAASNASYDRTFSLRQIRQIKEVRALAPEIAL 561

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIA 281
                     F+ +S+   PE    L  +G+ +      +   V  I GHTDA      A
Sbjct: 562 E------EINFETASAAIRPEEAEELAALGQAITAIIRENPRAVFLIEGHTDAV---GNA 612

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
             N  LS  RA S    L +  GV  + +    G+   +L + +     ANRR
Sbjct: 613 SYNLALSDRRAESVALALTEYFGVPPENLVT-QGYGESQLLVPTAEAERANRR 664


>gi|193222184|gb|ACF16363.1| outer membrane protein A [Riemerella anatipestifer]
 gi|194295638|gb|ACF40846.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295642|gb|ACF40848.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295644|gb|ACF40849.1| outer membrane protein [Riemerella anatipestifer]
          Length = 270

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 21/248 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 42  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 101

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262

Query: 312 ISGFAHHR 319
             G     
Sbjct: 263 -KGVGSAE 269


>gi|152997425|ref|YP_001342260.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
 gi|150838349|gb|ABR72325.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
          Length = 272

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 18  KKK---VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
           +++    +          W + YADF+T+L AFF+ ++ ++  +   ++ +++  +    
Sbjct: 11  RRRVVTKSSPSGAQGRDRWILSYADFITLLFAFFVALYSLSLKNSGDEQRLKETLHGVFD 70

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +  + K I    N  E       D+ + E     +    I  +N    Y  L   +   
Sbjct: 71  AVQKSIKPI----NIGEPIVGEPKDIEVVETKPIPAAPPTIEESNSSAVYALLSQVVENQ 126

Query: 135 SNSQQSEHC 143
            +   +   
Sbjct: 127 FSGLHASGQ 135



 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 10/222 (4%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
           Y     N       +++ H      + S K  ++ +    E    +       P +   I
Sbjct: 48  YSLSLKNSGDEQRLKETLHGVFDAVQKSIKPINIGEPIVGEPKDIEVVETKPIPAAPPTI 107

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                      L++ + +  SGL   +    +    +   + + +   ++  +F +    
Sbjct: 108 EESNSSAVYALLSQVVENQFSGL---HASGQISVTESADWVSLEL---KSGLLFGQGEYD 161

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS 302
              E + +L  +  VL     VI + G+TD  P  +     NW LS  R+ S    L+  
Sbjct: 162 LTNEAVALLILVANVLKAHPSVILVEGNTDDLPVNSRRLISNWHLSSLRSSSVVDELVYR 221

Query: 303 GVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           GV   ++    GF+    K+   +D     NRR+ + +  R+
Sbjct: 222 GVDP-KMIAPIGFSSEHPKVRNTNDYARQQNRRVILRISKRE 262


>gi|90415116|ref|ZP_01223071.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
 gi|90323761|gb|EAS40380.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
          Length = 252

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 69/252 (27%), Gaps = 21/252 (8%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
             L     +T         +    +                               G  +
Sbjct: 7   TTLVTAALLTSAMAPTAYANQADLQTADDTYVVGEQEQLIGLGSGAAFGALVGGPVGAVI 66

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVL 216
                        ++  +   +++ +    R   L+ +    +   +        ++   
Sbjct: 67  GAMVGGIVGTAVGQDEHIKSQNEDMVELTARNTELERIDVNYNQAQIEIARLQQDLQLQS 126

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275
            E     + +++        F   SS   P     L +I E++  S E+   + G+ D  
Sbjct: 127 EERQALMLEVNVH-------FRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRR 179

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---- 331
                ++ N+ LS+ R  +    L   G+  D++  +  +       +       N    
Sbjct: 180 ---GDSQKNFDLSMRRVDAVRDYLESQGIDTDQLL-VDAYGDLEPLKSEQNFE--NDFFD 233

Query: 332 RRIDILVEDRQG 343
           RR+   +   QG
Sbjct: 234 RRV--TLRSTQG 243


>gi|239934074|ref|ZP_04691027.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 205

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 6/111 (5%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287
            + +   +F K S          +  I   +       + + G TD       +     L
Sbjct: 87  YELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTDNL---GSSVHGDIL 143

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  RA +   VL     SE    +  GF   R   ++    S   NRR++I
Sbjct: 144 STQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRVEI 194


>gi|21672596|ref|NP_660663.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25090843|sp|Q8K9L4|OMPA_BUCAP RecName: Full=OmpA-like protein; Flags: Precursor
 gi|21623226|gb|AAM67874.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 347

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 32/126 (25%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +S+   P +   LQK+ + + +       I + GH D          N +LS +RAY
Sbjct: 233 FPFNSTELKPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRI---GNKEYNQKLSENRAY 289

Query: 294 SAYQVLMKSGVSEDRISKISGFA-------------HHRL-----KIASDPMNSANRRID 335
           S        G+S+D+I  I G                 R                 RR++
Sbjct: 290 SIKNYFTSHGISQDKI-SIQGMGNEFSLTNQICKDVSDRPLLISCLAPD-------RRVE 341

Query: 336 ILVEDR 341
           I V   
Sbjct: 342 IEVLSD 347


>gi|237751977|ref|ZP_04582457.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
 gi|229376544|gb|EEO26635.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
          Length = 167

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA 281
           +  + +Q     FD    +   +    +     VL  S      + I G+TD        
Sbjct: 51  INYVENQLQNIFFDFDKFVVRADMQNAIDNDASVLTSSAMGPLTVRIEGNTDEW---GTD 107

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
             N+ L L RA +  + L+  GV E +   +S +   +    +      + NR++  
Sbjct: 108 EYNYALGLKRAVAVKEALIAKGVEESKTVLVS-YGESKPTCTAKTKECWAENRKVTF 163


>gi|115379571|ref|ZP_01466660.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363429|gb|EAU62575.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 134

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               ++  S+   PE+   L+++ E L       ++I GHT           N  L   R
Sbjct: 20  GPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCEL---GTTEYNLALGQRR 76

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           A  A   L+K GV    +  +  +      +  + + + S NRR + 
Sbjct: 77  AAMAKDYLVKLGVGPGNV-AVVSYGEESPAVLGSGEEVWSRNRRSEF 122


>gi|111220228|ref|YP_711022.1| hypothetical protein FRAAL0749 [Frankia alni ACN14a]
 gi|111147760|emb|CAJ59419.1| Putative outer membrane protein [Frankia alni ACN14a]
          Length = 186

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD +SS    E +  LQ++   +      IS+ G++D         DN +LSL+RA S 
Sbjct: 89  LFDSNSSELRGEAMTALQQVLPAIREHPGPISVIGYSDGL---GRTEDNQKLSLERAKSV 145

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
              L    +    +  + G             +++ RR++I++ 
Sbjct: 146 EAWLATQNIPSS-VLDVEGRGEQG--AQDGVADASRRRVEIVLR 186


>gi|297157602|gb|ADI07314.1| secreted protein [Streptomyces bingchenggensis BCW-1]
          Length = 228

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +FDK+SS    E    ++ I + +   +   + + G TD       A    +LS +
Sbjct: 119 QAEVLFDKNSSKLGGEANARIRAIAQEIEKQNATSVRVFGFTDDL---GSALHGLKLSKE 175

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA +    L  + +      +I G+        +        NRR+++
Sbjct: 176 RANAVQHAL-SANLDSSVQYQIRGYGEQYPIADNSTEEGRKKNRRVEV 222


>gi|262341165|ref|YP_003284020.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272502|gb|ACY40410.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 413

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 17/112 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLD 290
           +  +FD       P ++ ++ +I E++ +S       I G+TD+         N  LSL 
Sbjct: 315 SPILFDLGKFALTPRSLSIVNEIAEIIINSLPNSKFYIDGYTDS---HGKLSYNKTLSLK 371

Query: 291 RAYSAYQVLMKSGVSEDRISKISGF--AHHRLKIASDPMNSANRRIDILVED 340
           RA S ++ L+  GV   RI ++ G     ++            RR++I +  
Sbjct: 372 RANSVFEALISKGVDSSRI-EVRGLVGGKYK---------KKGRRVEITIRK 413


>gi|213582299|ref|ZP_03364125.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 78

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 12/69 (17%)

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------N 331
            N  LS  RA S    L+  G+  D+IS   G         +      P  +       +
Sbjct: 1   YNQGLSEKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPD 59

Query: 332 RRIDILVED 340
           RR++I V+ 
Sbjct: 60  RRVEIEVKG 68


>gi|291442513|ref|ZP_06581903.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291345408|gb|EFE72364.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 208

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 6/111 (5%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287
            + +   +F K S          +  I   +       + + G TD       +     L
Sbjct: 90  YELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTDNL---GSSVHGDIL 146

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           S  RA +   VL     SE    +  GF   R   ++    S   NRR++I
Sbjct: 147 STQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRVEI 197


>gi|222100883|ref|YP_002535451.1| Motility protein B [Thermotoga neapolitana DSM 4359]
 gi|221573273|gb|ACM24085.1| Motility protein B [Thermotoga neapolitana DSM 4359]
          Length = 288

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 19/58 (32%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
             +       W   Y+D +T+L+ FF+ +  ++       + +             +
Sbjct: 4  KKQEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGQPPS 61



 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267
           +     +  E    G LI + D      F+  S+    E   +L K+G++ + H+T V+ 
Sbjct: 90  EEYKGKITVEERDEGTLIILKD---MVFFETGSAKLTAEAKDLLAKVGQIVIEHTTNVLE 146

Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           + G+TD  P    +I   NW LS  RA S     +   + E R+ +
Sbjct: 147 VFGYTDDRPVLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191


>gi|213420489|ref|ZP_03353555.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 59

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            RLS  RA S    L+  GV   RI + SG        ++      + NRR++I +
Sbjct: 1   MRLSQQRADSVASSLITQGVDASRI-RTSGMGPANPIASNSTAEGKAQNRRVEITL 55


>gi|34540795|ref|NP_905274.1| OmpA family protein [Porphyromonas gingivalis W83]
 gi|5081701|gb|AAD39496.1|AF145800_1 immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis]
 gi|34397109|gb|AAQ66173.1| OmpA family protein [Porphyromonas gingivalis W83]
          Length = 672

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 34/140 (24%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               +D   +   PE++  L ++  +L  + ++   +  H D    +     N  LS  R
Sbjct: 535 QNIFYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADR---KGPDAYNLGLSDRR 591

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------------------PMN 328
           A S    L   G++ DR+    G+     K  +                           
Sbjct: 592 AKSVVDYLTSRGIAADRL-TWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEE 650

Query: 329 SA------NRRIDILVEDRQ 342
                   NRR +  V + +
Sbjct: 651 QQSVCDQLNRRTEFRVIEEE 670


>gi|227498859|ref|ZP_03928999.1| predicted protein [Acidaminococcus sp. D21]
 gi|226904311|gb|EEH90229.1| predicted protein [Acidaminococcus sp. D21]
          Length = 354

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F      PLP     +  + +V     +    + G+TD+         N  LS  R    
Sbjct: 252 FASDDDQPLPSERDKMDHLVQVAKDHPDSTFKLVGNTDSD---ASDAYNEDLSKRRVDHV 308

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
            Q +  +GVS DR+  ++         ++        NRR+D+
Sbjct: 309 AQYVSNNGVSSDRLK-LNYKGEKDPVASNATEQGKADNRRVDV 350


>gi|89072281|ref|ZP_01158860.1| putative sodium-type flagellar protein MotY precursor
           [Photobacterium sp. SKA34]
 gi|89051813|gb|EAR57265.1| putative sodium-type flagellar protein MotY precursor
           [Photobacterium sp. SKA34]
          Length = 250

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284
             D R+  + F     +       +L  +   L +   V  +   GHTD          N
Sbjct: 127 YRDARDVVLQFRLGQRVVSSSQNEILADLASYLKYDKNVKRVLIDGHTDNV---GSNVTN 183

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            ++S  RA     +L ++GV    + +I           ++     + NRR+ I
Sbjct: 184 LQISKVRADDVASILRENGVRSS-LMEIRSHGSRYPVANNNTQDGKAKNRRVTI 236


>gi|291278011|gb|ADD91480.1| outer mebrane protein A [Riemerella columbina]
          Length = 326

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 63/251 (25%), Gaps = 21/251 (8%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                N   AS  +       +R     +D       T    + +             ++
Sbjct: 94  KSTVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLAEFQGCPDTDGDGVPDKDD 153

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N   ++    +  C    T             D+          +               
Sbjct: 154 NCPDVAGPVDNNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD------------- 200

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              +D    +    +      + +       +               F+   +   PE+ 
Sbjct: 201 ---RDNDGVLDKDDACPDVPGLAEYNGCPKPQEAYATEATGALQGIFFNFDKATIRPESN 257

Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L +   ++   +     + GHTDA   +  A  N RLS +RA S    L   GVS  +
Sbjct: 258 GKLDEAANIIKSSNGGTFLVTGHTDA---KGNANYNLRLSRERAASVVAALEARGVSSSQ 314

Query: 309 ISKISGFAHHR 319
           +    G     
Sbjct: 315 LKS-KGVGSAE 324


>gi|284035326|ref|YP_003385256.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283814619|gb|ADB36457.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 399

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD+SS +  PE+   L ++  VL  S    I IRGHTD          N +LS DR
Sbjct: 293 RNIYFDQSSPVLRPESSTELDQLAAVLLESPTTKIEIRGHTDNQ---GDFDSNVKLSRDR 349

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             +    L   G++++R+  + G         
Sbjct: 350 CQAVIDYLASKGIAKNRLKAV-GRGPIDPVAP 380


>gi|189463696|ref|ZP_03012481.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM
           17393]
 gi|189438646|gb|EDV07631.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM
           17393]
          Length = 397

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                +    LS     +     +  D      L  +  L             P    +I
Sbjct: 187 ISNAFDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLISQI 246

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                + +L  +  + +   + L+            T   I+        T  F   S+ 
Sbjct: 247 ELAAMQDKLAAMGAQNAQLKNALIQAQNQPVAEVTETEV-IVPDPDIAPRTVFFTIGSAE 305

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P  I+ L  + E +        ++ G+ D+         N  LSL RA +    L+K+
Sbjct: 306 LSPREIMNLSYLAEQMKQFPNVTYTVNGYADS--ATGTPAFNKELSLKRAQAVKDALVKN 363

Query: 303 -GVSEDRISKISGFA 316
            G++ DR++  +G  
Sbjct: 364 YGIAADRLNIEAGGG 378


>gi|91974956|ref|YP_567615.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
 gi|91681412|gb|ABE37714.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
          Length = 697

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             NT  F+  S    P+    LQ I + L  S      EV  I GHTDA+       DN 
Sbjct: 565 DLNTITFELGSWDISPDQASKLQAIADGLNRSISRNPREVFLIEGHTDAT---GNDTDNL 621

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA SA  +L +   V  + ++   G+    LK+ SD     NRR+ +
Sbjct: 622 SLSDRRAESAAALLTQQFAVPAENLTS-QGYGEQYLKVQSDGPERQNRRVTV 672


>gi|59714204|ref|YP_206979.1| outer membrane protein [Vibrio fischeri ES114]
 gi|59482452|gb|AAW88091.1| outer membrane protein [Vibrio fischeri ES114]
          Length = 274

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
              + ++   E           ++ A       ++L K++   L  +      +      
Sbjct: 76  PATVHQAKQNEARIARELEGGLQLDAANDLVIQRNLLKRLERQLDYVKRQETCQPPTDSN 135

Query: 220 T---RTGILISIIDQRNT-PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274
                  +   I D  N    F  +S+   P+ IV L +  ++L    +    I GH DA
Sbjct: 136 NGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHADA 195

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  L+L+RA    + L   G+S+ RI  +     +   ++    +    NR
Sbjct: 196 L---GEEDANQNLALERAKQVKRYLSIFGLSQQRIH-VDSVGSNDPYLSGTEPHVRLTNR 251

Query: 333 RIDILVED 340
           R+ I +  
Sbjct: 252 RVTIELLQ 259


>gi|224536169|ref|ZP_03676708.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522209|gb|EEF91314.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 396

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 5/195 (2%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                +    LS     +     +  D      L  +  L             P    +I
Sbjct: 186 ISNAVDINLELSAMAAEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLISQI 245

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                + +L  +  + ++ L   +     + V   T    I+        T  F   S+ 
Sbjct: 246 ELAAMQDKLAMMGAQ-NAELKNALVQAENQPVAEVTETQVIVPDPDIAPRTVFFQIGSAE 304

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P  I+ L  + E +        ++ G+ D+         N  LSL RA +    L+K+
Sbjct: 305 LSPREIMNLSYLAEQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKRAQAVKNALVKN 362

Query: 303 -GVSEDRISKISGFA 316
            G++ DR++  +G  
Sbjct: 363 YGIAADRLNVEAGGG 377


>gi|197336852|ref|YP_002158687.1| OmpA family protein [Vibrio fischeri MJ11]
 gi|197314104|gb|ACH63553.1| OmpA family protein [Vibrio fischeri MJ11]
          Length = 274

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
              + ++   E           ++ A       ++L K++   L  +      +      
Sbjct: 76  PATVHQAKQNEARIARELEGGLQLDAANDLVIQRNLLKRLERQLDYVKRQETCQPPTDSN 135

Query: 220 T---RTGILISIIDQRNT-PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274
                  +   I D  N    F  +S+   P+ IV L +  ++L    +    I GH DA
Sbjct: 136 NGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHADA 195

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  L+L+RA    + L   G+S+ RI  +     +   ++    +    NR
Sbjct: 196 L---GEEDANQNLALERAKQVKRYLSIFGLSQQRIH-VDSVGSNDPYLSGTEPHVRLTNR 251

Query: 333 RIDILVED 340
           R+ I +  
Sbjct: 252 RVTIELLQ 259


>gi|120555415|ref|YP_959766.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120325264|gb|ABM19579.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 309

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+      + +L  I   +    + E I + GH+D+        DN  LS +RA  
Sbjct: 192 FASGSTSLSQADMNLLDNIVTYVMADSTVERIFVDGHSDSI---GSRIDNRALSEERANV 248

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-NRRIDILVEDRQG 343
             + L   G+ E  +  +                 A NRR  I ++ RQG
Sbjct: 249 VAEYLKSRGIDET-MLTVRAHGDQYPV----SRRPADNRRTTIRLQ-RQG 292


>gi|327405327|ref|YP_004346165.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320835|gb|AEA45327.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 752

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 16/120 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           Q N   FD +     P+    L KI EV+      V+ +  HTD          N +LS 
Sbjct: 619 QINPINFDLNKFTIRPDAAKELDKIVEVMNKYPYLVVELGAHTDCR---ASKAYNMKLSD 675

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----------SDPMNSANRRIDILV 338
           +RA ++ + + K   +  RI    G+   RL              S+  +  NRR +  V
Sbjct: 676 NRAKASAEYIKKRITNPARIY-GKGYGESRLLNGCECEGTVKSDCSEEEHQKNRRTEFKV 734


>gi|281411904|ref|YP_003345983.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10]
 gi|281373007|gb|ADA66569.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10]
          Length = 288

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 35/118 (29%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   +   W   Y+D +T+L+ FF+ +  ++       + +             + 
Sbjct: 3   KKRKEEQKSSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                  N     +  +        +++            +     L++ +F+ + S 
Sbjct: 63  LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFETGSA 120



 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267
           +     +  E    G LI + D      F+  S+    E   +L K+G++ + H+T V+ 
Sbjct: 90  EEYKGKITVEERDEGTLIVLKD---MVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLE 146

Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           I G+ D       +I   NW LS  RA S     +   + E R+ +
Sbjct: 147 IYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191


>gi|91217502|ref|ZP_01254461.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
 gi|91184387|gb|EAS70771.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
          Length = 235

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 11/166 (6%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
               ++ K+ +  +    +  ++  +          E+ +  +           MF   S
Sbjct: 75  DKDTLQLKQEVVKIEDTSNPEIASKIDKIGESITNIESFKRILQEKKQLTPIGLMFTIDS 134

Query: 242 SIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            +      V+L    E     +   + I G+T           N  LS  R YS  + L+
Sbjct: 135 KMINKSDFVLLDFYIEQYQALNKGYLLIEGYTCDL---GTKSHNLELSERRNYSVEKYLI 191

Query: 301 KSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILVEDRQ 342
             G+   +I     +       R  I  +     NRR+++ + + +
Sbjct: 192 AKGIPSSKIKT-KSYGEKFFERRPII--EESRIENRRVNLSIIESK 234


>gi|89073344|ref|ZP_01159868.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
           SKA34]
 gi|89050831|gb|EAR56305.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
           SKA34]
          Length = 285

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 50/155 (32%), Gaps = 8/155 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +++ + L   +S+        +  + +          I+         + ++S    
Sbjct: 131 QDWQRQNRSLEVGLSAVAFQKGYQSFSQCLSKLLPYGFEDIAFSVLH----YSENSDTLN 186

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L +I + + +S ++  +                  +S  RA    Q     G+ 
Sbjct: 187 KISQQRLAQIADFVRYSDDIDLVLVAAFNDSISGTTES-QEMSERRAEKLRQYFQSLGLP 245

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           ++R+ ++  +   R    +        NRR+ I +
Sbjct: 246 DERV-QVEAYGKRRPIADNSTPMGRNLNRRVVISL 279


>gi|118577387|ref|YP_899627.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504892|gb|ABL01374.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 191

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 36/105 (34%), Gaps = 24/105 (22%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S      +   L      L    + I I G T        ++ N  LS  RA +  
Sbjct: 100 FTFDSHRLSKASKSQLNT----LDFKNKKIVIDGFTCTI---GRSKYNLSLSKKRARTVA 152

Query: 297 QVLMKSGVSEDRISKISGFAHH-----RLKIASDPMNSANRRIDI 336
             L+  GVS   + KISGF        +           NRR++I
Sbjct: 153 DYLISKGVS---VLKISGFGESGKYKKKPL---------NRRVEI 185


>gi|285803774|pdb|3LDT|A Chain A, Crystal Structure Of An Outer Membrane Protein(Ompa)from
           Legionella Pneumophila
          Length = 169

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  SS          L  +  +L    +  I + G TD            +LS  +A + 
Sbjct: 58  FXFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETX 114

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L  +G++  R+    G+        +     ++ NRRI+I
Sbjct: 115 XTFLWANGIAAKRLKA-EGYGDKNAISDNAIIHGSAQNRRIEI 156


>gi|260890422|ref|ZP_05901685.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
 gi|260860042|gb|EEX74542.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
          Length = 149

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+   ++        +++I   L     +  I + GHTD++      + N +LS  RA +
Sbjct: 36  FNIDGNVLNESEASTIREIVNDLNKYGKSGTIDVIGHTDST---GSQKHNLKLSETRAKN 92

Query: 295 AYQVLMKSGVSEDRIS--KISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             +++ + G+   R S  KI G   +      D +     NRR++IL+ +
Sbjct: 93  FARLMREFGLD-KRFSFGKIKGGGANSPVDTDDRVEGRYNNRRVEILLNN 141


>gi|254429094|ref|ZP_05042801.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196195263|gb|EDX90222.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 203

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F    +         L+    VL       +S++  TD    +  A  N +L+  R  
Sbjct: 72  VYFGFDQNELADAEARRLESNLAVLKQYPTLQVSVQAFTDE---KGAASYNQKLAARRLD 128

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
              Q L   G+S  RI +++        +   ++     NRR++++
Sbjct: 129 RVVQYLRDGGISNGRIKRVA-LGEELPILPDANNEQRVINRRVELM 173


>gi|54307256|ref|YP_128276.1| hypothetical protein PBPRA0019 [Photobacterium profundum SS9]
 gi|46911676|emb|CAG18474.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 290

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 8/141 (5%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            +S +  +   K  L       +L     + +   +   S++     +     I E +  
Sbjct: 146 VISNVNFELPAKQFLSCKNDLILLNYQQVRSSEFYYPSGSTLVSKLDVRTAYGIAEYVKV 205

Query: 262 STEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +  +   G++D+      +  N R+S +RA     +L++ GV   ++ +I       
Sbjct: 206 IRSIKKVLIDGYSDSQ---GRSTVNLRISRERAEEVAALLIEFGV-PQKMIQIRSHGDRY 261

Query: 320 LKIAS--DPMNSANRRIDILV 338
               +        NRR+ + +
Sbjct: 262 PIADNALADGRKKNRRVTVRL 282


>gi|296158506|ref|ZP_06841336.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295891074|gb|EFG70862.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 372

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 237 FDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAY 293
           FD+      LP     L ++   L    +V SIR  G+TD          N +LS  RA 
Sbjct: 237 FDRGDLAGMLPAGKAKLDELVRNLKQVDDVTSIRIDGYTDRL---GSDSYNRQLSAKRAE 293

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRIDI 336
           +  + L   GVS        G       +  +D  + A       NRR+++
Sbjct: 294 TVKRYLQSGGVSAP--ISARGRGKEDPVVQCNDRNHEALIACLGPNRRVEL 342


>gi|157962338|ref|YP_001502372.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157847338|gb|ABV87837.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
          Length = 249

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 26/182 (14%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             +   L    ++ +   +    L +L+ +       L    + +         G+ +  
Sbjct: 76  HTQQTMLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQ- 134

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
                   F   SS+  P     L  I   ++ S E  + + G+ D       +  N  L
Sbjct: 135 --------FKTGSSVIEPHFQQQLNDIAYAMSLSPELTLDLTGYADRR---GDSDYNQAL 183

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-------RRIDILVED 340
           S  R       L + GV E+R+     F           M   N       RR+ + +++
Sbjct: 184 SEQRVAEVKNYLTEQGVEEERLHN-QAFGDSSPL-----MAEQNFENDFFDRRVTLKLQN 237

Query: 341 RQ 342
           + 
Sbjct: 238 QN 239


>gi|89053189|ref|YP_508640.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88862738|gb|ABD53615.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 195

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           MF   S+         LQ+            +I GHTD+         N RLS  RA + 
Sbjct: 97  MFQSGSARLTGSGRQYLQQFFAG--AGAYAYAIYGHTDSR---ASDEYNMRLSERRAAAV 151

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             V    G    R+++  G+   R    +D       NRR++I+
Sbjct: 152 ANVARSVG---ARVAREIGYGERRPVAPNDSAANMQRNRRVEIV 192


>gi|114800514|ref|YP_760698.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
 gi|114740688|gb|ABI78813.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
          Length = 387

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 10/114 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRGHTDASPFRNIARDNWR 286
           Q     F+   S    +   V+ +    +          ++I GHTD          N R
Sbjct: 275 QEFVVYFEWDRSDVTSQAAAVIDQAVANIRSVEGCAAGSVTIVGHTDT---SGNPDYNQR 331

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           LS+ RA      L + G+  + +    G     L  A+        NRR ++ +
Sbjct: 332 LSVRRADVVAAALSERGI-ANTLITQDGKGETALAKATQDGVREPLNRRSEVTI 384


>gi|70731289|ref|YP_261030.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
 gi|68345588|gb|AAY93194.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
          Length = 460

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 11/132 (8%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---I 268
             G         +            F++ S+    +    L ++ + L    ++     +
Sbjct: 334 APGPQMPEAYQALTRQAQRLTVNFRFEEGSASLDNKARQDLNRVLDYLRQHGKMNRQVTL 393

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
            G  DA      A     LS  RA +  + L+KSGV      +I GF       A+    
Sbjct: 394 AGFGDAKNDPARAAL---LSKLRAMAVRRELVKSGVV---FREIRGFGAELPVAANSADE 447

Query: 329 SA--NRRIDILV 338
               NRR+++ V
Sbjct: 448 GRIKNRRVEVWV 459


>gi|269219690|ref|ZP_06163544.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210932|gb|EEZ77272.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 212

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+   P    VL   + +      + ISI GHTD+         N +LS DRA + 
Sbjct: 106 FEVDSANLTPRAREVLDGLVSKWRKKKPKEISITGHTDSV---ADDDHNQKLSEDRAKAV 162

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRIDIL 337
               +   VS   I ++ G                 ++   +ANRR+ I+
Sbjct: 163 RSY-VAPKVSGVSI-EVEGKGEKEPAASETNEDGSPNEAGKAANRRVVIV 210


>gi|242310688|ref|ZP_04809843.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
 gi|239523086|gb|EEQ62952.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
          Length = 172

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 14/153 (9%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQRNTPMFDKSSSIPLPET 248
                + ++ S        +          + I      + +      F+       P+ 
Sbjct: 20  SQKSGVDTSASQTQNMQNAQQGYVAGKDNFVNIEDRIQYVENGLQNIFFNFDQFSIRPDM 79

Query: 249 IVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
              +     VL     +   + I G+TD          N+ L L RA +    L+  GVS
Sbjct: 80  QNAVDNDANVLKDTAANPLTVRIEGNTDEW---GTDEYNYALGLKRAVAVKDALVARGVS 136

Query: 306 EDRISKISGFAHHRL--KIASDPMNSANRRIDI 336
           E ++  +S +   +      +    + NR++  
Sbjct: 137 EGKMVLVS-YGESKPTCMEKTRECWAENRKVTF 168


>gi|28869933|ref|NP_792552.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28853178|gb|AAO56247.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 451

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 350 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 406

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 407 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 451


>gi|258620793|ref|ZP_05715828.1| outer membrane protein [Vibrio mimicus VM573]
 gi|258586991|gb|EEW11705.1| outer membrane protein [Vibrio mimicus VM573]
          Length = 173

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249
             +  ++S T        + +       +    +   D+++  +   +  +         
Sbjct: 25  TQVRGRLSETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYPFNKYQLSGPHQ 84

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +LQ    ++  S   I + GH D +      + N  LS  RA +  + L  +    +RI
Sbjct: 85  EILQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRI 140

Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVE 339
            +  GF        +  +     NRR+ + ++
Sbjct: 141 VE-KGFGESAPVCTVQENAQTGCNRRVVLTIQ 171


>gi|283955187|ref|ZP_06372689.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793400|gb|EFC32167.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 247

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +        ++     +   +++       +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQEKYKSTAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQIALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSILRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQEKYKSTAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           I +++  +     F++ S+  +   I    K    L         I IRG+TD S     
Sbjct: 113 IALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSILR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQTLENNRVEIY 221


>gi|260459525|ref|ZP_05807780.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259035079|gb|EEW36335.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 121

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           F   S+         ++ I + L           + I GHTDA       + N  LS  R
Sbjct: 12  FAFGSAAISSSQYGKIENIADALKRILRRDRGARVLIEGHTDAV---GSFQSNQVLSEQR 68

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           A S  + L++  GV    +  + G+    L + +   N  NRR+
Sbjct: 69  AASLKRTLVREFGVPGHALETV-GYGEEFLLVPTQNENWQNRRV 111


>gi|258651985|ref|YP_003201141.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM
           44233]
 gi|258555210|gb|ACV78152.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233]
          Length = 478

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 82/290 (28%), Gaps = 12/290 (4%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           D     A    +     N + +              ++ K     D         L    
Sbjct: 191 DATKVDAKTVSYGQTVINKIGSDLAYAGGTEADPARNKAKFQPFEDPTSKHRIDHLVDTE 250

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
            +     +  +    + + S       +S          +  + +       + +  L  
Sbjct: 251 NDPFYGAEWDQATKSWANESPGRRVGASSTKTGVSTSATMDDTPEAPAPRAGKGDSELSF 310

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM- 236
            S   +L  +          KI    +  +     K      T +    + +DQ      
Sbjct: 311 ESVPMVLETREPLGAILWGFKIEDKENAPIVLTGAKDADVTDTPSAAWGATMDQYYAAKY 370

Query: 237 ------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 FD   +         L  +   L  +  + +  G   A+     A+ N  LSL 
Sbjct: 371 AEILDDFDIGKADLKDAHKTQLDSVVTKLQGNAALRAQLG--GAADLTGGAKVNMALSLK 428

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           RA +A   L+  G+   R+ ++  +     ++A+      S NRR+ + V
Sbjct: 429 RAENARDYLVSKGIDAARL-EVQSYGADWARVATTTGTNESKNRRVQVWV 477


>gi|148269399|ref|YP_001243859.1| OmpA/MotB domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147734943|gb|ABQ46283.1| OmpA/MotB domain protein [Thermotoga petrophila RKU-1]
          Length = 288

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 35/118 (29%)

Query: 21  VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80
               +   +   W   Y+D +T+L+ FF+ +  ++       + +             + 
Sbjct: 3   KKRKEEQKSSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                  N     +  +        +++            +     L++ +F+ + S 
Sbjct: 63  LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFETGSA 120



 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267
           +     +  E    G LI + D      F+  S+    E   +L K+G++ + H+T V+ 
Sbjct: 90  EEYKGKITVEERDEGTLIVLKD---MVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLE 146

Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           I G+ D       +I   NW LS  RA S     +   + E R+ +
Sbjct: 147 IYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LREKRMIE 191


>gi|330965346|gb|EGH65606.1| OmpA family protein [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 451

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 350 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 406

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 407 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 451


>gi|190571199|ref|YP_001975557.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213018599|ref|ZP_03334407.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190357471|emb|CAQ54905.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995550|gb|EEB56190.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 159

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 17/136 (12%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            KGV        ++  I D+R    F    S     +   L  + EVL ++ +  +++ G
Sbjct: 23  KKGVNTTNKMNAVVKQIGDKR--VFFGYDESSISEVSADALLDVMEVLQNNPDAKVTLTG 80

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP- 326
           HTD          N  L   RA +A + ++  +   E+RI   S          +  D  
Sbjct: 81  HTDNR---GSHEYNLALGARRADAAKKFMVSCTPYLENRIKTAS-KGETEPLVNVKDDSR 136

Query: 327 ------MNSANRRIDI 336
                  ++ NRR++ 
Sbjct: 137 NSKYEKEHAKNRRVEF 152


>gi|212693934|ref|ZP_03302062.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855]
 gi|237723935|ref|ZP_04554416.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265751214|ref|ZP_06087277.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212663466|gb|EEB24040.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855]
 gi|229437761|gb|EEO47838.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|263238110|gb|EEZ23560.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 401

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWR 286
           + D  N   F+   +   P+   ++ +I + +L  +++   I G TDA   +  ++ N  
Sbjct: 280 LCDLFNNIYFEFDKTEITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNME 336

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           LS  RA +    L+K GV  +++ K  G  
Sbjct: 337 LSQKRADAVVNALIKKGV-PNKMLKAKGVG 365


>gi|149908775|ref|ZP_01897435.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
 gi|149808049|gb|EDM67990.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
          Length = 284

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 8/153 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D+   + S   G V D   + +   +  +   +   D+               +  +  
Sbjct: 137 DDIHAVLPSVNLGDVFDGYYQCLRDISPFSYEQVR--DRNLYYSGGSYLLNTQQKQEMAA 194

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                 L      + I GH+++        +N  LS  RA   Y  LM++G+S  ++ ++
Sbjct: 195 IVKYISLDGLVTKVLIDGHSNSI---GNTVNNLLLSQQRADDVYMYLMEAGIS-TKLMEV 250

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
                     +    +    NRR+++ +  R G
Sbjct: 251 RSHGDRYPLKSDRTASGREKNRRVNLRIIRRLG 283


>gi|291562029|emb|CBL40845.1| Flagellar motor protein [butyrate-producing bacterium SS3/4]
          Length = 313

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 15/192 (7%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                ++I         P    K   + ++    +   K+  T++  +    VK      
Sbjct: 54  QNQGSENITINSQMSDTPEVDSKGQEIGQEDLQAEDVNKLYLTIAESLNQAGVKEATVIR 113

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASP 276
                 +S     N   F  +SS+   E   VL    + +A +      ++I  HT    
Sbjct: 114 GDDYTYVSF---ANNVFFGANSSVLTREGQAVLYTFAKAIAPAAGGIEQVNIMSHTAKVT 170

Query: 277 FRNIARD-----NWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA 330
             +         +  LS  R+      L +   +  +++  IS +  +R    +      
Sbjct: 171 DNSQINPQIIRKDRILSAMRSAEVCIYLQQQNVIKPEKLVDIS-YGEYRPIADNSTEEGR 229

Query: 331 --NRRIDILVED 340
             NRRI+ L+ D
Sbjct: 230 IKNRRIEFLLLD 241



 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +   ++ G+W   Y D +T+L+ FF++++ ++  D        +              
Sbjct: 3   KKNRPTDSGGNWMDTYGDMVTLLLTFFIMLYSMSNLDAQKWTIFVKSIPNIQNQGSENIT 62

Query: 82  GIFDEQNPPERSSQNKIDLSID 103
                 + PE  S+ +     D
Sbjct: 63  INSQMSDTPEVDSKGQEIGQED 84


>gi|153006246|ref|YP_001380571.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029819|gb|ABS27587.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 274

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 8/107 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +    ++   LQK+ + L  +     + +G+ D       A+ N  L   RA SA
Sbjct: 173 FGFDQANLTADSQGTLQKLADCLKATPAKRVVAQGYADER---GTAQYNVALGNRRAESA 229

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            + L   GV     ++   F       +         NRR++  VE 
Sbjct: 230 RKYLEDLGVGGK--TETVSFGEENALCSEATESCWEQNRRVEFQVER 274


>gi|239908713|ref|YP_002955455.1| hypothetical protein DMR_40780 [Desulfovibrio magneticus RS-1]
 gi|239798580|dbj|BAH77569.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 1002

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 237  FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI----ARDNWRLSLDR 291
            F        P+    + +  + L  +    + + G+TD S  R         N  LS  R
Sbjct: 894  FSSEQGSVPPDAAGQIAEAAQRLKAAGVGSVLVIGYTDNSRLRRALLRQYGTNAVLSQAR 953

Query: 292  AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            A S  + L+K+G+   ++ +I GF        +D       NRR++I+
Sbjct: 954  AASVAEGLVKNGIDAGKV-QIHGFGSAMPVSPNDTPFNREKNRRVEII 1000


>gi|329902808|ref|ZP_08273256.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548603|gb|EGF33260.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 392

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 16/114 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +         L  +           +S+ G+TD        + N  LS  RA + 
Sbjct: 281 FAFGQATLTAAGKTQLDMLITAANAGGYGSVSVDGYTDQI---GSDKVNLALSTARATTI 337

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSA------NRRIDILV 338
              L+  G+S  +I + +G     LK+     A     +       NRR+D+ +
Sbjct: 338 RDYLLAHGLSALQI-RATGHGATSLKVELAQCAGSTGAALQTCLAPNRRVDVTL 390


>gi|294782985|ref|ZP_06748310.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480677|gb|EFG28453.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
          Length = 141

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +Q L        +  +    +K +          ++I+       FD   S+  P+   
Sbjct: 25  AVQALTTTQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFE 84

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +L  + + +  +   ++I GHTD+       + N  LS  RA +    L++ G+ EDRI
Sbjct: 85  MLNNLKDFIEQNNYELTIEGHTDSV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRI 140


>gi|170722232|ref|YP_001749920.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
 gi|169760235|gb|ACA73551.1| OmpA/MotB domain protein [Pseudomonas putida W619]
          Length = 435

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 56/200 (28%), Gaps = 13/200 (6%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                +        +++      +   Y       +     +  +     A         
Sbjct: 241 EGDAPAMLPDRPLVASEDYPLSRRLYFYLPANAKSQAKALAEFAQSPAGQAIVAEQGFVS 300

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKIGEVLAH-- 261
               ++      +       ++   QR +  F     S+    + +   +++ + L    
Sbjct: 301 QQIKSLAIPAQVDMPPRYRNLAQKAQRLSVNFRFQEGSASLDNKALRDTKRVADYLRQAG 360

Query: 262 -STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                  + G  D       A     LS  RA +  + L + GV    + +++G      
Sbjct: 361 KLQNKAVLVGFGDPKETPGRAAL---LSRLRAQAVRRELARDGVE---VLEVTGMGDELP 414

Query: 321 KIASDPMNS--ANRRIDILV 338
              ++       NRR+++ V
Sbjct: 415 VAGNELEQGRLRNRRVEVWV 434


>gi|302186190|ref|ZP_07262863.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
          Length = 447

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                    + ++   +    Q++  +       +    +            +       
Sbjct: 281 PSSAHQRWAQALIRFAQSAEGQEIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L         +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RA +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|167855462|ref|ZP_02478226.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
 gi|167853391|gb|EDS24641.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
          Length = 281

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD    I   +   V+  + E L  S  E + + G+ D          N  LS  R
Sbjct: 140 GDFLFDFDKDILTTKGREVVDNVAEQLKSSGAEKVKLVGYADRL---GSEEYNLDLSQRR 196

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337
           A      L++ G+      +  G+       A D  +          NRR++I 
Sbjct: 197 ANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248


>gi|66045711|ref|YP_235552.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
 gi|63256418|gb|AAY37514.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
          Length = 447

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
               P    + ++   +    Q +  +       +    +            +       
Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L         +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
             RA +  + L+K GV+      I G         +  D     NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKRGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|226939541|ref|YP_002794614.1| RmpM [Laribacter hongkongensis HLHK9]
 gi|226714467|gb|ACO73605.1| RmpM [Laribacter hongkongensis HLHK9]
          Length = 210

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 29/128 (22%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291
            +F    S   PE    L  +   +       + + + G+TD   +    + N  LS  R
Sbjct: 92  VLFGFDKSTVTPEGKQALVDVANKIKSKGAKLQGVEVLGYTD---YIGTEKYNMALSERR 148

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------------NRRI 334
           A +   VL++ G    +I+   G         +D                      +RR+
Sbjct: 149 AAAVKNVLVEMGADPAKITSA-GRGEL-----NDKTAQECRAKKQSYKQLKACLAPDRRV 202

Query: 335 DILVEDRQ 342
           D+ +  +Q
Sbjct: 203 DVEITAQQ 210


>gi|186682639|ref|YP_001865835.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186465091|gb|ACC80892.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102]
          Length = 657

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 68/281 (24%), Gaps = 11/281 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +++        +    A+ G+          +          +    S            
Sbjct: 360 QSLPAASGASLRTTADATTGVEGGYFTDALHNDAPAHGGTGTNAPAGSALPAQYPFGNDP 419

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
                        +S  +        R  +                 E N+    ++K +
Sbjct: 420 AQPNPATPGLSRPSSSGASGATIGYKRSDDPTDIKAAELTDAPGGAGEFNFDFQTVAKGE 479

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
                          +     +   +    +   F+          + +     FD  S 
Sbjct: 480 DTMTTYGALHWGFQIRAGKVENDRASAQDGQSATFDAALQKHQDFYVHEPVIFYFDFDSD 539

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                    +    + L    +  ++  G  D       +  N  LSL RA +    L  
Sbjct: 540 QLSSSETGKIDTFLDYLRRFPDVKVTPEGFADRR--GGASGHNLDLSLRRAQAVGAALRA 597

Query: 302 SGVSEDRISKIS-GFAHHR---LKIAS--DPMNSA--NRRI 334
            GV+E +IS ++ G            +  D   +   NRR+
Sbjct: 598 KGVAEAQISAVTIGSGSTEDFTPDATTNQDTEANRRGNRRV 638


>gi|254512328|ref|ZP_05124395.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221536039|gb|EEE39027.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 515

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 58/154 (37%), Gaps = 12/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +   LA  IS+  + +  + + + +      + + +S         F+  SS P  ++  
Sbjct: 369 QGDRLANAISTGGTEVGLEELQRMIETLRPLSRLSLSFR-------FEPGSSHPDAQSRS 421

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL---MKSGVSED 307
            + ++ + L + T   S       S     A  N R++L RA +    +   +++ + + 
Sbjct: 422 NILQLAQALENGTLDASHLAFVGFSDGDGAAASNTRIALRRARTVRNAVLGAVETSIPDS 481

Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
               + GF         D       NRR+++ V 
Sbjct: 482 IEITVEGFGEAMPMACDDTEWGRKVNRRVEVWVR 515


>gi|77360808|ref|YP_340383.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76875719|emb|CAI86940.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 180

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     FD   +    +   +L+   E L  ++ V   I GH D          N  L  
Sbjct: 74  QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNSSVKVLIEGHADER---GTPEYNIALGE 130

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            R  +  + L   GVS  ++  +  +   +  + S   +  + NRR  ++
Sbjct: 131 HRGQAVEKYLQSLGVSASQM-SVVSYGEEKPMVKSRTESAFAKNRRAVLV 179


>gi|170751934|ref|YP_001758194.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658456|gb|ACB27511.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
          Length = 348

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 11/154 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPET 248
            +  +     + T   +V  +    +        +   +     NT  FD  S    P+ 
Sbjct: 174 AQADEAEVYEALTAPPVVQVDRRYTLDQIRYSPDLRARLRSVDINTITFDTGSFTVTPDQ 233

Query: 249 IVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
              L  I   +         EV  I G TDA      A DN  LS  RA +   VL +  
Sbjct: 234 AAKLSGIAGAMNRAIQANPREVFLIEGFTDAV---GSALDNLSLSDRRAQAVATVLTEQF 290

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            V  + ++   G+    LK+ +   +  NRR+ +
Sbjct: 291 RVPPENLTT-QGYGEQYLKVNTQGPSRENRRVVV 323


>gi|317014512|gb|ADU81948.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           Gambia94/24]
          Length = 179

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 177


>gi|317480796|ref|ZP_07939881.1| OmpA family protein [Bacteroides sp. 4_1_36]
 gi|316903039|gb|EFV24908.1| OmpA family protein [Bacteroides sp. 4_1_36]
          Length = 416

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
              +     D      F+    +    +  +L ++  +L +  +    I G+TDA     
Sbjct: 285 PVMVDTVFCDLLENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDAR---G 341

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            A+ N RLS  RA + Y+ L++ GV    + K  GF +    +   P+ + N R
Sbjct: 342 SAQYNLRLSERRAKAVYKALLERGV-PSHMLKWRGFGNRAALVP--PVAADNIR 392


>gi|148862|gb|AAA24941.1| 31 kDa antigen [Histophilus somni]
          Length = 273

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD        +    +  +   L   + + I I G TD          N  LS  RA  
Sbjct: 141 LFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRL---GTDSYNLDLSQRRADR 197

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336
             + L++ G++ D I  I G+   +     +D            NRR++I
Sbjct: 198 VKERLIEKGLNID-IIAI-GYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245


>gi|113460985|ref|YP_719052.1| outer membrane protein [Haemophilus somnus 129PT]
 gi|170717551|ref|YP_001784639.1| SmpA/OmlA domain-containing protein [Haemophilus somnus 2336]
 gi|112823028|gb|ABI25117.1| outer membrane protein [Haemophilus somnus 129PT]
 gi|168825680|gb|ACA31051.1| SmpA/OmlA domain protein [Haemophilus somnus 2336]
          Length = 273

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +FD        +    +  +   L   + + I I G TD          N  LS  RA  
Sbjct: 141 LFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRL---GTDSYNLDLSQRRADR 197

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336
             + L++ G++ D I  I G+   +     +D            NRR++I
Sbjct: 198 VKERLIEKGLNID-IIAI-GYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245


>gi|329901809|ref|ZP_08272908.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549018|gb|EGF33629.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 396

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 16/114 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S      +  L  +       +   ++I G+TD       A +N  LS  RA +A
Sbjct: 285 FAFGRSTLTAAGMQQLDALIISARAGNYSAVAITGYTDQI---GSAAENLALSQARARTA 341

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSA------NRRIDILV 338
            Q ++  G+  DR    +G     LK+     +     +       NRR+++ +
Sbjct: 342 RQYMIAHGL-TDRAITATGAGATNLKVELAQCSGKTGAALQACLADNRRVEVTL 394


>gi|219870536|ref|YP_002474911.1| lipoprotein Plp4/outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Haemophilus
           parasuis SH0165]
 gi|219690740|gb|ACL31963.1| lipoprotein Plp4/outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Haemophilus
           parasuis SH0165]
          Length = 281

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD    I   +   V+  + E L  S  E + + G+ D          N  LS  R
Sbjct: 140 GDFLFDFDKDILTTKGREVVDDVAEQLKSSGAEKVKLVGYADRL---GSEEYNLDLSQRR 196

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337
           A      L++ G+      +  G+       A D  +          NRR++I 
Sbjct: 197 ANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248


>gi|307823678|ref|ZP_07653906.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
           SV96]
 gi|307734972|gb|EFO05821.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
           SV96]
          Length = 191

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            ++T  F   SS    + + V+    + L        +  GH D          N  L  
Sbjct: 82  SKSTIYFMLDSSQVQDDFVPVIAAHAQYLVAHPGQRVVMEGHGDER---GSREYNIALGE 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341
            RA S   ++   GV++ ++ ++  +   +       +     NRR++++ + +
Sbjct: 139 QRAKSIASMMKVQGVADGQL-EVVSYGEEKPASLGHDEASWELNRRVELVYQGK 191


>gi|300313508|ref|YP_003777600.1| hypothetical protein Hsero_4223 [Herbaspirillum seropedicae SmR1]
 gi|300076293|gb|ADJ65692.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 161

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 16/120 (13%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI------- 280
               F + S+    E      ++ E +A          I + GHTD  P +         
Sbjct: 33  KEGAFRRGSACVESEAKAAFAQVEERIAEYLQQNPAGRIYVEGHTDDKPVKAPVTDVRAF 92

Query: 281 ---ARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
                DN  LS  RA  A  +L+        R   ++G+   +        +  NRR+++
Sbjct: 93  CTVYDDNITLSAARARQARLLLVGRSSPEAARRVIVAGYGDSQPLPGLAASDERNRRVEV 152


>gi|262173884|ref|ZP_06041561.1| outer membrane protein [Vibrio mimicus MB-451]
 gi|261891242|gb|EEY37229.1| outer membrane protein [Vibrio mimicus MB-451]
          Length = 189

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +  +          VLQ    ++  S   I + GH D +      + N  LS  RA +  
Sbjct: 88  YPFNKYQLSGPHQEVLQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVT 143

Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339
           + L  +    +RI +  GF        +  +     NRR+ + ++
Sbjct: 144 RYLRDTLKLGNRIVE-KGFGESAPVCTVQENAQTGCNRRVVLTIQ 187


>gi|313905138|ref|ZP_07838507.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
 gi|313470041|gb|EFR65374.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
          Length = 293

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 9/120 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA-- 281
           + I+ +N   F+  SS         L     VL         I+I GHT A+        
Sbjct: 124 TFIEFKNKAFFEGDSSALTASGRQALDIFCAVLAPEKDQVSQINIMGHTAAAQSAKTDSI 183

Query: 282 RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           R +  L+  RA      + +   +   ++  +  +  +R    +        NRR++IL+
Sbjct: 184 RGDRMLASMRAAEVLVFIQEKNVIEPAKLVSME-YGEYRPIADNSTEEGRAANRRVEILL 242



 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 54/192 (28%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           W   Y D +T+LM FF++++ +++ D    +   +   P   +    S  +  +      
Sbjct: 16  WMDTYGDLVTLLMTFFVLLYSMSSLDQSKWELFVKSIYPGMTDSDKDSAEMKLDAQVVST 75

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           SS   I          +  D+        +Q      +   +S  +     +       E
Sbjct: 76  SSVENIVAGESTMPENSVDDVNSLYIMFAQQMDAAGISDVQVSRGKDYTFIEFKNKAFFE 135

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                  ++  +                 +I  M      Q            L +    
Sbjct: 136 GDSSALTASGRQALDIFCAVLAPEKDQVSQINIMGHTAAAQSAKTDSIRGDRMLASMRAA 195

Query: 213 KGVLFETTRTGI 224
           + ++F   +  I
Sbjct: 196 EVLVFIQEKNVI 207


>gi|194295646|gb|ACF40850.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295648|gb|ACF40851.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295650|gb|ACF40852.1| outer membrane protein [Riemerella anatipestifer]
 gi|194295654|gb|ACF40854.1| outer membrane protein [Riemerella anatipestifer]
          Length = 270

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 21/248 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T    + +             ++N  
Sbjct: 42  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 101

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 205

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262

Query: 312 ISGFAHHR 319
             G     
Sbjct: 263 -KGVGSAE 269


>gi|144900188|emb|CAM77052.1| conserved hypothetical protein, secreted [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 196

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 9/146 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIG 256
           I+S          +     + T    L ++ D+       F   ++  LPE   ++ +  
Sbjct: 55  IASAGEKPSPAKPLDEARIKQTWADALAAMPDRPVTFQLYFSSGTADLLPEAAELVVQAV 114

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++        I I GH DA         N R+S  RA     ++++ G+    I   S  
Sbjct: 115 DLAKKRPHVFIMIAGHADAV---GSDEVNDRISRRRAEVVRNLVVERGLPPRAIVA-SSH 170

Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339
                 + +        NRR+ + ++
Sbjct: 171 GKRNPLVPTKDGVAEPRNRRVTLTLQ 196


>gi|91777230|ref|YP_552438.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689890|gb|ABE33088.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 372

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 17/195 (8%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                 +  + ++     E   +    +         KRL D  +K    ++  +     
Sbjct: 154 TSPLFPQCQEAQRLTACSEVELIHAGHEAWTRDFDESKRLVDGVEKGMPGVAAALEACTP 213

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR-- 269
             V          +++        FD+      LP     L ++   L  + +V SIR  
Sbjct: 214 PPVAATVPAVPQKMTLQADATFR-FDRGDLAGMLPAGKAKLDELVRNLKQADDVTSIRID 272

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN 328
           G+TD          N +LS  RA +  + L+  GV+        G       +  +D   
Sbjct: 273 GYTDRL---GSDSYNRQLSAKRAETVKRYLLSGGVTAP--ISARGRGKEDPVVQCNDHNR 327

Query: 329 -------SANRRIDI 336
                  + NRR+++
Sbjct: 328 EALIACLAPNRRVEL 342


>gi|323493924|ref|ZP_08099041.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
 gi|323311865|gb|EGA65012.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
          Length = 188

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249
             ++  ++   +      +  G     +     +   D+    +   +        P   
Sbjct: 41  TQVSGHLTQREAKSENTLLNSGRDVVHSEAEDDVCFYDKETQSLVLNYGIDIYKLSPNHK 100

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            VL++    L ++T  I I GH D+         N  LS  RA    + L       +RI
Sbjct: 101 QVLEQYLG-LVNNTAKIYIEGHADSL---GSEGYNKALSARRANQVAKYLKSDLKQGNRI 156

Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVED 340
            + + +        +  +     NRR+ I V+ 
Sbjct: 157 VEHA-YGESSPICNLTQNSATGCNRRVVITVKS 188


>gi|261417437|ref|YP_003251120.1| hypothetical protein Fisuc_3058 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373893|gb|ACX76638.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327827|gb|ADL27028.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 243

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 31/192 (16%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTRTGIL-ISIIDQRNT 234
            ++K+  +  +   + QD   +I   L     D++       ++    +    I      
Sbjct: 43  QITKQDNIKKQAINKYQDTRDEIYKELKSTFKDSLNVWGAELDSATLTVRFNEIALDGTP 102

Query: 235 PMFDKSSSIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTDASPFRN------ 279
            +F    ++  P    +++            E      E I I GHTD++P  +      
Sbjct: 103 VLFASGDTLLPPRYKSMMKFFFPKYLEILDGEKFREHIEEIRIEGHTDSTPCYSLCKTLE 162

Query: 280 -IARDNWRLSLDRAYSAYQV-LMKSGVS--------EDRISKISGFAHHRLKIASDPMNS 329
                N  LS  R+ +  +  L ++ VS          +    +G +  + +   +    
Sbjct: 163 RNYLYNMNLSQARSRNVLRYGLTETDVSKDTTLLEFARKYIIATGLSFSQPRATQE---- 218

Query: 330 ANRRIDILVEDR 341
            +RR++I V  +
Sbjct: 219 KSRRVEIRVRTK 230


>gi|206891094|ref|YP_002249885.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743032|gb|ACI22089.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 182

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
               ++  + ++     FD        + +  L+K+   L    +  + I GH D     
Sbjct: 60  QMAELIKKLQEEIGDIHFDYDKYDVRQDDLPTLKKVASYLQKYPKLRVIIEGHCDER--- 116

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333
                N+ L   RA SA Q L+  G+   RI  IS +   +      ++     NRR
Sbjct: 117 GTNEYNFALGQKRADSAKQYLITLGIISSRIDIIS-YGEEKPLCTEQNESCWQKNRR 172


>gi|94967622|ref|YP_589670.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549672|gb|ABF39596.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 241

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 226 ISIIDQRNTP------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278
           IS+ DQ+          +D  +         VLQ              +I GH D     
Sbjct: 122 ISLSDQQAFAKYVKDIYYDYDAYTVRAADQAVLQANANFFKQHPNIHFTIEGHCDER--- 178

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
                N  L  +RA +A   ++++G+    +  IS +   +     +++     NRR   
Sbjct: 179 GSTEYNLALGDNRASAAKNAIVQAGIPASSVRTIS-YGKEKPFCTESNEQCWQQNRRAHF 237

Query: 337 LV 338
           ++
Sbjct: 238 VI 239


>gi|213967029|ref|ZP_03395179.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
 gi|301385214|ref|ZP_07233632.1| OmpA family protein [Pseudomonas syringae pv. tomato Max13]
 gi|302059607|ref|ZP_07251148.1| OmpA family protein [Pseudomonas syringae pv. tomato K40]
 gi|302130155|ref|ZP_07256145.1| OmpA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928351|gb|EEB61896.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
          Length = 447

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSAKLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|218676259|ref|YP_002395078.1| Outer membrane protein [Vibrio splendidus LGP32]
 gi|218324527|emb|CAV26009.1| Outer membrane protein [Vibrio splendidus LGP32]
          Length = 188

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 10/147 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKI 255
           +         + + +            +   D+    +   +  +  +       VL + 
Sbjct: 47  LIKLDEKPQNEVLNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQY 106

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
              L      I I GH D+         N  LS  RA      L K     +RI + + +
Sbjct: 107 LS-LVGDKSKIYIEGHADSL---GSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-Y 161

Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340
                   +  +     NRR+ I V+ 
Sbjct: 162 GESAPICKVTDNKATGCNRRVVITVKS 188


>gi|86144308|ref|ZP_01062640.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
 gi|85837207|gb|EAQ55319.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
          Length = 182

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 10/147 (6%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKI 255
           +         + + +            +   D+    +   +  +  +       VL + 
Sbjct: 41  LIKLDEKPQNEVLNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQY 100

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
              L      I I GH D+         N  LS  RA      L K     +RI + + +
Sbjct: 101 LS-LVGDKSKIYIEGHADSL---GSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-Y 155

Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340
                   +  +     NRR+ I V+ 
Sbjct: 156 GESAPICKVTDNKATGCNRRVVITVKS 182


>gi|312892475|ref|ZP_07751968.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311295055|gb|EFQ72231.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 724

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 +D   S   P+    L  +  +L       + +  H D          N  LS 
Sbjct: 591 SIGKIYYDLDKSFIRPDAEGALNHLINLLNSYPGLKVIVASHCDTR---ASIDYNIGLSQ 647

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342
            R+ SA   L+  GVSE+RI ++  F   RL          ++  +  NRR + ++  + 
Sbjct: 648 RRSLSARAYLLAHGVSENRI-QMEYFGKSRLANKCADGVPCTEADHQLNRRTEFVLL-KN 705

Query: 343 G 343
           G
Sbjct: 706 G 706


>gi|146307460|ref|YP_001187925.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
 gi|145575661|gb|ABP85193.1| phosphate ABC transporter substrate-binding protein, PhoT family
           [Pseudomonas mendocina ymp]
          Length = 460

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 16/293 (5%)

Query: 51  MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
           ++    +D             + ++  + +   F E                 E  T+ S
Sbjct: 178 LFSGQISDWSALGGRPGAVRQYARDDNSGTYDTFKELVLAPGGRSLAGTAQRFESSTQLS 237

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
             +                    ++ +          T                  +   
Sbjct: 238 DAVAGDPNGIGFIGLPYIRQAKAVAIAAGDSQPMPPSTTLIATEDYPLSRR-----LFIY 292

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
               L       ++      R Q +          + A  +            +      
Sbjct: 293 NQPQLDNPWARALIDFAHSPRGQAIVDSTGFIAQTVQAVQVAPDAQLPADYRQLAEQAQR 352

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRL 287
                 F + S+    +    LQ++ + L         + + G  DA      A     L
Sbjct: 353 LSVNFRFQEGSATLDNKAQRDLQRVMDYLRQHDKLQGKVVLVGFGDAKSDPERAEL---L 409

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           S  RA +  + L + GV      +++G        A++  +    NRR+++ V
Sbjct: 410 SKLRAMAVRRELARQGVL---FREVTGLGGELPVAANNEEHGRIRNRRVEVWV 459


>gi|312961581|ref|ZP_07776081.1| OmpA domain protein [Pseudomonas fluorescens WH6]
 gi|311284164|gb|EFQ62745.1| OmpA domain protein [Pseudomonas fluorescens WH6]
          Length = 306

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 15/171 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            + +   + ++ L     +  +       +          T       +           
Sbjct: 136 PQPVNRAEAERELATSRTQAHAVSRASTVEACRHYDYLVDTSRFKRYELSGDVVFNFGKS 195

Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
                       L ++   L H     + + + GHTD          N +L   RA +  
Sbjct: 196 GPQDISAAGHKALAQLITALQHDDAQIKQMQVVGHTDPI---GDEAANQQLGQRRADTLR 252

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN----SANRRIDILVE 339
            +L+  G+ E  I   S   +    +     +        + NRR+ + VE
Sbjct: 253 SLLIAKGIPES-IISASSAGNREPVVYSCYGNREQRIACYAPNRRVVVTVE 302


>gi|304312855|ref|YP_003812453.1| Outer membrane protein [gamma proteobacterium HdN1]
 gi|301798588|emb|CBL46818.1| Outer membrane protein [gamma proteobacterium HdN1]
          Length = 285

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             +  + L    + L      I + GH+D          NW +S  RA +  + L+  GV
Sbjct: 191 KAQARLDLIAGYQKLDAGIRKIFVDGHSDTM---GRLGHNWEVSRLRANAVREYLIAKGV 247

Query: 305 SEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            E+ +  +  +   R      +   + ANRR+ +
Sbjct: 248 PEE-MIVMRYWGKSRPIDKRGNRKSSPANRRVVV 280


>gi|330446461|ref|ZP_08310113.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490652|dbj|GAA04610.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 166

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   ++  PE I  L      +   +  I I GHTD   ++     N  LSL R+++  
Sbjct: 63  FDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTD---YQGSDSYNEALSLRRSHAIE 119

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333
             L    + E     ++  F      +       N+ NRR
Sbjct: 120 SYLKAR-IDESHYQFEVKYFGEKNPIVKGHSLKANALNRR 158


>gi|116624434|ref|YP_826590.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227596|gb|ABJ86305.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 508

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 89/260 (34%), Gaps = 17/260 (6%)

Query: 84  FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143
            D     + +            I +     +  +  +       +  +   +++Q+++  
Sbjct: 247 ADTSLISQSARAAVQTAEDARLIAERRAQEQNLAAARSTAAAAEQEKLQAQADAQRAKVE 306

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
            +S     +  +   +  +   +  +         +     A     R + + +   S +
Sbjct: 307 ADSARAQIDAERAARQQAEAAAAAAESRAAAGADRAAATPPAALPAPRREAVDQ--KSQV 364

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              + +++   +    T  G+++++ DQ         +S+    +  + +    V A   
Sbjct: 365 RMRLLESLNGLLPSRDTPRGLIVTVPDQGFN-----GASLRTDYSERLARVAAVVAAEQG 419

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             ++I G TD++   +       L++ RAY     +M+ G+    +    G    R   +
Sbjct: 420 LRMTIEGSTDSAATES-------LAMKRAYEVRDAMMRGGLPSSSVDA-RGLGASRPLTS 471

Query: 324 SDPMNSA--NRRIDILVEDR 341
           +   +    NRR++I++   
Sbjct: 472 NGTESGRSTNRRVEIVISGS 491


>gi|152989276|ref|YP_001348049.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
 gi|150964434|gb|ABR86459.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
          Length = 465

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 85/297 (28%), Gaps = 19/297 (6%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           + T              +              ++    +     +L +  H    S D +
Sbjct: 174 SLTTAQLAAVFAGEVRTWEALGGKGGAIRLYARDEQSGTYDTFRELVLASHGKSLSADAR 233

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK----- 169
              +N +       +          S      L     +   +     L  + +      
Sbjct: 234 RFESNDRLSAAVAADPHAIGFVGVASVGGARPLAVADGESLPMAPLESLIATEDYPLSRR 293

Query: 170 ---EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
               +         + ++   +  R Q +  +       + A  +            +  
Sbjct: 294 LFLYQKPGEKNPWAQALVRFAQSPRGQAIVTRSGFVAQRIQAVQVAPRPQMPAEYRQLAE 353

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARD 283
                     F + S++   + ++ +Q++ + L  + ++     + G  D  P  +  R 
Sbjct: 354 QARRLTVNFRFQEGSALLDNKALLDVQRLLDYLRQNQKMRKRTVLVGFGD--PKSDAERS 411

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              LS  RA +  + L + GVS     +I GF       +++       NRR+++ V
Sbjct: 412 VL-LSRLRAMAVRRELARGGVS---FREIVGFGDELPVASNEQEAGRQKNRRVEVWV 464


>gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
 gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
          Length = 446

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 67/271 (24%), Gaps = 9/271 (3%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125
            ++ +    N +   +   +          N+        +   +  + +  T   +Q  
Sbjct: 169 AEFLHTALPNGINGEQNTLEIGAGVVFKFGNRTRYIPAPPMHMPAKQVDLSCTQSAEQVP 228

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
             E             +        +  G      + +       E           +  
Sbjct: 229 PGEPLEIIAQAITWPGNDAVDYDWHASAGTVQGSGSMVSIETAGLEPGTYHVYGTAHLAD 288

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                    ++  I       V       V    T    ++          FD +     
Sbjct: 289 DAGVHSDCQVSFTIVPPQKAKVI--TRTIVEKPATNNPAMLDFEKNIQDAFFDYNQYNLR 346

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           P+    +      L    +  I+I G  D       A  N  L L RA +  + L K G+
Sbjct: 347 PDAQSAIAHDASYLESHPDIHITIAGFADER---GTAEYNIWLGLQRALAVRRALAKDGI 403

Query: 305 SEDRISKISGFAHHRLKIASDPMN--SANRR 333
              R++ +  +   +   +         NRR
Sbjct: 404 DMGRMN-VLSYGKEKQFCSDQTPACFQQNRR 433


>gi|15612119|ref|NP_223771.1| putative Outer membrane protein [Helicobacter pylori J99]
 gi|4155645|gb|AAD06633.1| putative Outer membrane protein [Helicobacter pylori J99]
          Length = 179

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGESKPKCVQKTRECYRENRRVDVKL 177


>gi|84515254|ref|ZP_01002616.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
 gi|84510537|gb|EAQ06992.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
          Length = 497

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 12/111 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+    + +  +Q++ + L         I I G TD          N RL+L RA 
Sbjct: 391 FASGSANLDNKALEDVQRMVDFLNSPAARNREILIIGFTDDV---GRFDLNERLALLRAG 447

Query: 294 SAYQVLMKS---GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           S    L+ +    V   R + ++ +        +D  +    NRR++I + 
Sbjct: 448 SVRNALVTALGGDVLAGR-TSVASYGPLAPVGCNDTADGRESNRRVEIWLR 497


>gi|330875090|gb|EGH09239.1| OmpA family protein [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 447

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|333030282|ref|ZP_08458343.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
 gi|332740879|gb|EGJ71361.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
          Length = 227

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290
            +  +FD +SS   P +   L +  ++L     +   + G TD          N  +S  
Sbjct: 109 DSGILFDFNSSTLSPASRSSLSQFADILRQDPTIDIAVFGKTDKV---GTYDANMTVSNR 165

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           RA S    L   GV++ +   + G  + +       + + NR +DI +   +
Sbjct: 166 RAQSVKSFLQSQGVNDYQFKSVQGVGYTQ--YDEALLPAQNRVVDIYMYASE 215


>gi|329849877|ref|ZP_08264723.1| ompA family protein [Asticcacaulis biprosthecum C19]
 gi|328841788|gb|EGF91358.1| ompA family protein [Asticcacaulis biprosthecum C19]
          Length = 254

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRG 270
           + VL         ++         F   S+    ++  +L  I   +    + +  S+ G
Sbjct: 120 EQVLQAAEDCTDRVTAAVADRRLQFISGSAELTGDSQAILIDIYNTIQTCPQNLALSVEG 179

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           +TD         DN +LS  RA +A   L+  G+++  +S   G+        +      
Sbjct: 180 YTDNV---GQDNDNMKLSTARAEAAAFALIDLGLAQASVSS-RGYGAQNPIADNTSEDGR 235

Query: 329 SANRRIDILVEDR 341
           + NRR+D ++  R
Sbjct: 236 ARNRRVDFILRPR 248


>gi|34540489|ref|NP_904968.1| immunoreactive 42 kDa antigen PG33 [Porphyromonas gingivalis W83]
 gi|27805653|sp|Q9S3R8|OMP40_PORGI RecName: Full=Outer membrane protein 40; Short=Omp40; AltName:
           Full=PG33; Flags: Precursor
 gi|5759279|gb|AAD51068.1|AF175715_1 immunoreactive 42kD antigen PG33 [Porphyromonas gingivalis]
 gi|34396802|gb|AAQ65867.1| immunoreactive 42 kDa antigen PG33 [Porphyromonas gingivalis W83]
          Length = 380

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 12/152 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPE 247
             + DL  +I+S L G V +   + V           ++          F  +S+     
Sbjct: 235 ALVNDLNNQINS-LRGQVEELSRRPVSCPECPEPTQPTVTRVVVDNVVYFRINSAKIDRN 293

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             + +    E    +   I + G+ D       A  N +LS  RA +  ++L K GVS D
Sbjct: 294 QEINVYNTAEYAKTNNAPIKVVGYADEK--TGTAAYNMKLSERRAKAVAKMLEKYGVSAD 351

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           RI  I               N+ NR   I+V 
Sbjct: 352 RI-TIEWKGSSEQIY---EENAWNR---IVVM 376


>gi|89094116|ref|ZP_01167059.1| probable signal peptide protein [Oceanospirillum sp. MED92]
 gi|89081591|gb|EAR60820.1| probable signal peptide protein [Oceanospirillum sp. MED92]
          Length = 198

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 17/121 (14%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +++   FD  S    P  +  +    + L      +++ GH D       +  N  LS  
Sbjct: 86  EKHIVYFDFDS--SNPGDVSDIADYIKSLKEV-NSVNLVGHADRI---GASAYNDALSQK 139

Query: 291 RAYSAYQVLMKSGVSEDRISKISGF-AHHRLKIASDPMNS--------ANRRIDILVEDR 341
           R  +    L  +GVS   IS   G+   +    + D            ANRR+++ +  +
Sbjct: 140 RVNAVSDALQGAGVSGSAIST--GYMGENAPAKSCDGQRGTNLIDCLRANRRVEVEISGK 197

Query: 342 Q 342
           +
Sbjct: 198 K 198


>gi|327189348|gb|EGE56516.1| putative outer membrane protein, OmpA family [Rhizobium etli
           CNPAF512]
          Length = 722

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 13/201 (6%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
           ++  R+S          D ++   ++    LPP+     L+        D  +     LS
Sbjct: 512 DARGRESVLYYSPDLYEDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLS 571

Query: 205 GLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259
               + + +    +  +    I         +T  F   S+         L+K+ + +  
Sbjct: 572 EPPVEPVERVYSLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMAQARTLRKVADAISQ 631

Query: 260 ---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315
                 +E   I GHTDA       + N  LS  RA S   VL    G+  + +    G+
Sbjct: 632 VLKKDPSETFLIEGHTDAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGY 687

Query: 316 AHHRLKIASDPMNSANRRIDI 336
               LK+ +      NRR+ I
Sbjct: 688 GERYLKVNTAGPEQENRRVTI 708


>gi|289625126|ref|ZP_06458080.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648705|ref|ZP_06480048.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867997|gb|EGH02706.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 447

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                    + ++   +    Q +  +       + A  +            +       
Sbjct: 281 PTSAHQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ E L       + +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RA +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|332304548|ref|YP_004432399.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332171877|gb|AEE21131.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 368

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 10/225 (4%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE-NYFLPPLSKE 181
           +     +     ++         S    S        +  +  SI+K         +   
Sbjct: 143 EIAAYHDFGEAYNDVSAKIGLAYSFGATSAPVTRDSDNDGVNNSIDKCPGTAPGVQVDAM 202

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                            +  +            V          + + +     +F  +S
Sbjct: 203 GCALAATAVEADSDNDGVVDSQDKCANTPSSDKVDATGCSIFTEVEVEETLR-ILFANNS 261

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S         ++     +       ++  G+  A      +  N  LS +RA +   VL+
Sbjct: 262 SEIANRANSDIRDFAAFMKRFPSTDTVIEGYASA---PGESDYNQWLSEERAKAVRMVLI 318

Query: 301 K-SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
           +   +   RI+ + G+   +L  A     +   NRRI   V   +
Sbjct: 319 EDYDIKPARITAV-GYGESKLLDAPTAKEANKINRRIVARVSASK 362


>gi|268316443|ref|YP_003290162.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262333977|gb|ACY47774.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
          Length = 496

 Score = 67.3 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 13/143 (9%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
             + L  D++   ++ E T   ++ ++     +  F+   S        VL++   VL  
Sbjct: 359 ADNELGRDSVQARIVVEPTACDLISTL----ESVSFEFGRSTLTDSARAVLERNARVLQS 414

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             E V+ + G+TD   +      N  LSL RA + Y    + G+  +R+    G      
Sbjct: 415 CPELVVQLVGYTD---YVGGEAFNALLSLRRALAVYNYYQQQGIEPERLI-FRGLGELPP 470

Query: 321 KIASDPMNS---ANRRID-ILVE 339
              +          RR+D I++ 
Sbjct: 471 PCPNPADRPGCRELRRVDTIVIR 493


>gi|330960958|gb|EGH61218.1| OmpA family protein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 447

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 13/209 (6%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            ++    +  +R       L  + D   S             +     ++  +  +  A 
Sbjct: 245 ARAVAIADGESRPMLPTTSLVATEDYPLSRRLYLYVPPAAHQRWAQALVRFAQSPEGQAI 304

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKI 255
                        +      +       ++   +R +  F     S+    +    L+++
Sbjct: 305 VAQEGFVAQTVQALKVQPTAQMPADYQALTRKAERLSVNFRFAQGSARLDNKAQQDLKRV 364

Query: 256 GEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            + L  +    + +++ G  DA      A     LS  RA +  + L+KSGV+      I
Sbjct: 365 VDYLKANDRLDQHVTLVGFGDAKSDPARAAL---LSRLRAMAVRRELLKSGVT---FRDI 418

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVE 339
            G         +D  +    NRR+++ V+
Sbjct: 419 LGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|291278013|gb|ADD91481.1| outer mebrane protein A [Riemerella columbina]
 gi|291278015|gb|ADD91482.1| outer mebrane protein A [Riemerella columbina]
          Length = 326

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 71/251 (28%), Gaps = 21/251 (8%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
                N   AS  +       +R     +D       T    + +             ++
Sbjct: 94  KSTVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLAEFQGCPDTDGDGVPNKDD 153

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           N   ++    +  C    T             D+       EN   P   ++    + + 
Sbjct: 154 NCPDVAGPVDNNGCPWPDTDGDGVLDKDDACVDV---AGPAENNGCPWPDRDNDGVLDKD 210

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            +  D+   +        AD+                          F+ + +   PE+ 
Sbjct: 211 DKCPDVPGLVQYDGCPKTADDYATEAT-------------GALQGIFFNFNKASIRPESN 257

Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L +  +++   +     + GHTDA   +  A  N RLS +RA S    L   GVS  +
Sbjct: 258 GKLDQAADIIKSSNGGTFLVTGHTDA---KGNANYNLRLSRERAASVVAALEARGVSSSQ 314

Query: 309 ISKISGFAHHR 319
           +    G     
Sbjct: 315 LKS-RGVGSAE 324


>gi|237752333|ref|ZP_04582813.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
 gi|229375822|gb|EEO25913.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
          Length = 276

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 8/163 (4%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           ++   +  +    +  + I S +     +             G    I+      +FD+ 
Sbjct: 74  QQQADITVEPETAEEVRLIESAILDFKENVKTSLGPSNIIDEGSEGFILRFSGKLLFDEG 133

Query: 241 SSIPLPETIV-VLQKIGEVLAHSTE--VISIRGHTDASPFRNI--ARDNWRLSLDRAYSA 295
                    V  L+++  +L        + + G+TD          +D+  LS  RA   
Sbjct: 134 EITLNDADEVLFLKRLALILQKMPSTLHLDVIGYTDNRTISPTPKFKDDIGLSALRALGV 193

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
            +VL+++GV+  +++ + G       + +        NRR++ 
Sbjct: 194 ERVLLENGVNPKKMTAL-GNGATNFILPNTTKENRQKNRRVEF 235


>gi|332297504|ref|YP_004439426.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
 gi|332180607|gb|AEE16295.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
          Length = 1044

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 260  AHSTEVISIRGHTDASPFR-----NIARDNWRL---SLDRAYSAYQVLMKSGVSEDRISK 311
                  + I GH +          + A  N  L   S  RA +  ++L++ GV   R++ 
Sbjct: 955  KFKDYTVRIEGHANNVTGTEAEETSTANGNIPLVPLSEARAQTVKKMLIEFGVDGSRLTT 1014

Query: 312  ISGFAHHRLKIA--SDPMNSANRRIDILV 338
            + G    +  +          NRR++ ++
Sbjct: 1015 V-GIGGRQPVVPRSDKDNWWKNRRVEFIL 1042


>gi|258624773|ref|ZP_05719704.1| outer membrane protein [Vibrio mimicus VM603]
 gi|258582935|gb|EEW07753.1| outer membrane protein [Vibrio mimicus VM603]
          Length = 173

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249
             +  ++S T        + +       +    +   D+++  +   +  +         
Sbjct: 25  TQVRGRLSETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYPFNKYQLSGPHQ 84

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +LQ    ++  S   I + GH D +      + N  LS  RA +  + L  +    +RI
Sbjct: 85  EILQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRI 140

Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVE 339
            +  GF        +  +     NRR+ + ++
Sbjct: 141 VE-KGFGESTPVCTVQENAQTGCNRRVVLTIQ 171


>gi|320107209|ref|YP_004182799.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319925730|gb|ADV82805.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
          Length = 257

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNW 285
                     FD  S     +   + Q+    LA    +  + G + D       A  N 
Sbjct: 145 EFHQNVQDVFFDYDSYDLRLDAGALAQRAASYLAAHPAIKVVIGGYCDER---GSAEYNL 201

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
            L  +RA +A   L+ +GVS +R+ ++  +   +      ++     NRR    ++ 
Sbjct: 202 ALGENRANAAKTALVTAGVSPNRL-RVISYGKEKQFCTEQNETCYQQNRRAQFSLDR 257


>gi|260428375|ref|ZP_05782354.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
 gi|260422867|gb|EEX16118.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
          Length = 817

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 13/105 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+    E   VL ++  ++A +      + I GH D          N  LS+ RA 
Sbjct: 236 FAIDSARLKDEHRAVLAELRRLIAVAEPGALRVVIVGHADE---SGPELHNSGLSVRRAR 292

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           +    L ++ V+      I+GF        +D     S NRR++I
Sbjct: 293 AVRTALGRASVAG-----IAGFGEAAPLDPADSVEARSRNRRVEI 332


>gi|188994593|ref|YP_001928845.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC
           33277]
 gi|53828382|dbj|BAD54749.1| hypothetical protein [Porphyromonas gingivalis]
 gi|188594273|dbj|BAG33248.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC
           33277]
          Length = 391

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++  L  ++       V+      V   T    IL          +F   S +   + ++
Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
            L  + + +  + E I++ G+ D +      + N +LS  RA +   VL  K GV  + +
Sbjct: 309 NLYDVAQFVKETNEPITVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364

Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337
             +       +         + N R+ I+
Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388


>gi|217032687|ref|ZP_03438173.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
 gi|216945617|gb|EEC24268.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
          Length = 157

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 45  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 101

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 102 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 155


>gi|34540490|ref|NP_904969.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83]
 gi|37538316|sp|Q9S3R9|OMP41_PORGI RecName: Full=Outer membrane protein 41; Short=Omp41; AltName:
           Full=PG32; Flags: Precursor
 gi|34396803|gb|AAQ65868.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83]
          Length = 391

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++  L  ++       V+      V   T    IL          +F   S +   + ++
Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
            L  + + +  + E I++ G+ D +      + N +LS  RA +   VL  K GV  + +
Sbjct: 309 NLYDVAQFVKETNEPITVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364

Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337
             +       +         + N R+ I+
Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388


>gi|333029776|ref|ZP_08457837.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
 gi|332740373|gb|EGJ70855.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
          Length = 389

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPL 245
           +  ++ L  ++         + +   +     R   ++   +  +      F    S   
Sbjct: 245 ESEMRRLQNQLRDA--QAYNNQLKDEIEALRNRKPEVVYKETSANDSRVVFFQIGKSNLT 302

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
              +V +Q + E +  + +   + G+ D+         N RLS  RA +    L+K GV 
Sbjct: 303 SRDLVTVQMMAESIKATDKTYKVVGYADS--ATGSKALNQRLSEARANAVKDALIKEGVK 360

Query: 306 EDRISKISGFA 316
           E ++ ++ G  
Sbjct: 361 ESQL-EVVGMG 370


>gi|329847556|ref|ZP_08262584.1| ompA family protein [Asticcacaulis biprosthecum C19]
 gi|328842619|gb|EGF92188.1| ompA family protein [Asticcacaulis biprosthecum C19]
          Length = 438

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +  T  F  +S+ P  + + V+    +         +++ GH D       A  N +LS 
Sbjct: 330 RNFTVYFPFNSATPTADGLAVISAAAQQARSQPGAPVTVTGHADT---SGSAPYNIQLSQ 386

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
           +RA      L++ GV    ++        +  +   +   N+ NRR  I +
Sbjct: 387 NRARMVADGLIQMGVPASAVNT-DWKGEAQPAVPTGNGVKNAENRRATISI 436


>gi|291334148|gb|ADD93818.1| outer membrane protein [uncultured marine bacterium
           MedDCM-OCT-S05-C362]
          Length = 269

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D  SS   PE    L      +    +V  ++ GH D +      R N  LS++RA   
Sbjct: 165 YDHDSSDISPEDQAYLSAEVGRIPMHDKVSLTVVGHADRT---GTERYNHDLSVERAIGV 221

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
           ++ L + G+  DR   +S        I +        NRR ++L++
Sbjct: 222 HRALSQYGI-GDRSIGVSAKGETVPAIPTSDGQSEPRNRRSEVLIK 266


>gi|328884733|emb|CCA57972.1| secreted protein [Streptomyces venezuelae ATCC 10712]
          Length = 205

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 55/187 (29%), Gaps = 16/187 (8%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK-KISSTLSGLVADNIV 212
           G       D       +        S    L +     L       I   +     +   
Sbjct: 20  GPVPVARADDPPGSAGDAAPPPAIDSNAPGLMLPDGATLAPAKVLDIKQIVEEEGGEQRR 79

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGH 271
           +    + T           +   +F K+S+   P     +  I   +    +  + + G 
Sbjct: 80  QDTNVDVTFA--------LQAEVLFPKNSAKLTPAANARIAAIAAEIKKLGSGRVRVFGF 131

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330
           TD            +LS +RA +  QVL +S + +     I G++       +       
Sbjct: 132 TDNL---GTYAHGLKLSKERAVAVQQVLARS-LDQGTTFDIRGYSEDYPIADNATEEGRK 187

Query: 331 -NRRIDI 336
            NRR++I
Sbjct: 188 KNRRVEI 194


>gi|189466361|ref|ZP_03015146.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM
           17393]
 gi|189434625|gb|EDV03610.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM
           17393]
          Length = 385

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 15/272 (5%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
           +NP          G     +         +     +    + V  + G+T        L 
Sbjct: 125 YNPNRVVDFYLFAGPTMNLSSKGTEFTGGMVGDAYQLAANDDVKARFGATAGLGLGFNLN 184

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
             +      +              +  +     ++  +       F      ++      
Sbjct: 185 QKLALNVEGRFGVTPSIFGDASDCRKAEATARVNVGLTYTFGGKKFAKVSDIDEDAINAE 244

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             R +    +  + L+             +     I            F   S+      
Sbjct: 245 INRYRSELAQAQADLANCKNSLANMKPEVKEVIKEIQ---TAGPRAIFFKIGSARLDDYG 301

Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            V +Q   ++L  + +    + G+ D       A  N +LS  RA   Y  L+  GV +D
Sbjct: 302 KVNIQLAAKILKANPDKKYKVAGYCD--KATGSAAYNQKLSEKRAQVVYDALIAEGVDKD 359

Query: 308 RISKISGFAHHRLKIASDPMNSAN--RRIDIL 337
           ++  + GF       +       N   R+ IL
Sbjct: 360 QLEFV-GFGGTENMFS------KNYLNRVVIL 384


>gi|116750906|ref|YP_847593.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699970|gb|ABK19158.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 522

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
           + +  +F   +S    +  + + +  E L H      + +GHT           N  LS 
Sbjct: 407 KTDPVVFQSGTSDLSFQGKLEIDRAVERLKHYPNFRVVIKGHTGTE---GDPEANKTLSR 463

Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK--IASDPMNSAN-R--RIDILVED 340
           +R+ +  + L +   ++ +R+  + GF   +       +   S N R  R+++++  
Sbjct: 464 ERSEAVARYLEVTYNINPNRLLPV-GFGGEKPLPRNPGESTRSYNYRLPRVEMVLVR 519


>gi|163795658|ref|ZP_02189623.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159178954|gb|EDP63489.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 285

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 61/236 (25%), Gaps = 10/236 (4%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            +++    +           I   +    +     S    +     L ++          
Sbjct: 54  AEMEFAEGDYMDSDTFAARAIASANGKPPAPEELASRDIPAAAQGGLAEARRKLMEALDG 113

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS--GLVADNIVKGVLFETTRTGILISI 228
                 P +  +  A       +       + +       D  +  +           SI
Sbjct: 114 GARTAKPDAAARAQASFDCWMQEQEENFQPADIKWCKDRFDAAMAQLGTPAPAAAPKPSI 173

Query: 229 IDQRNTPMFDKSSSIPLPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
                T  FD   S    +T   L          +   I + G+ D          N  L
Sbjct: 174 TFANFTVYFDFDKSTLTAQTQSTLIDAANAADDMAATNIEVSGYADR---SGSEAYNMAL 230

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
           S  RA +  + L    G     + +++ F   + K+        + NRR+ I +  
Sbjct: 231 SQRRADAVAKELTTLIGAKAPAMKRLA-FGESQNKVVTPDGVKEAKNRRVKIEIRK 285


>gi|158338606|ref|YP_001519783.1| outer membrane protein A [Acaryochloris marina MBIC11017]
 gi|158308847|gb|ABW30464.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017]
          Length = 507

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 66/251 (26%), Gaps = 13/251 (5%)

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
           S  +      D+  T   +      T                           +      
Sbjct: 265 SGISNRSQLQDQIATDGDLSAPDADTVLNGINFFTALEAQDWMQQDALNQRITATAAVLV 324

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               L +  +    +   +       + +K++ + R    +   K    + S   A    
Sbjct: 325 LSGTLTQVPENPSQLYDPQFVSQAADNTKKLIDIVRADNPELAKKLEGKSPSTQTASKPT 384

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIR 269
             +    +   + +          F   ++         L K+ + +A          + 
Sbjct: 385 ADIKSAPSIGNLKVR-----GEVKFAVGAANLTSSGRQTLDKLSKEIAEFNPDTVAVRVI 439

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           GHT  +     A  N  LS  RA    Q L + G+ +    +  G           P ++
Sbjct: 440 GHTSKT---GSASLNQSLSQQRAQVVVQYLKRLGIKQA--IQAEGKGFSAPLPGIPPSDA 494

Query: 330 ANRRIDILVED 340
            N+R +I +  
Sbjct: 495 RNQRTEIRLVR 505


>gi|308183230|ref|YP_003927357.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           PeCan4]
 gi|308065415|gb|ADO07307.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           PeCan4]
          Length = 179

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 177


>gi|283955761|ref|ZP_06373252.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792716|gb|EFC31494.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 247

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +        ++     +   +++       +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           + +++  +     F++ S+  +   I    K    L         I IRG+TD S     
Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221


>gi|163795725|ref|ZP_02189690.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159179021|gb|EDP63556.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 313

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 66/214 (30%), Gaps = 11/214 (5%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +    +  + ++      L        DL  +    ++I   E               + 
Sbjct: 86  DTPMPVELANRNIANPTKLAELEAARADLVSTLQTGRTIAPVEAGVAQAKFDCWAEQQEE 145

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             +   +A   ++ L  + A          T  T   +     RNT  FD       P+ 
Sbjct: 146 GHQFDHIAACQTAYLMAMEALKAAMQ---PTNVTYETVQQEVARNTVYFDWDKDTIRPDQ 202

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG--VS 305
              L K    +     V   I GHTD          N  LS  RA +    L + G  V 
Sbjct: 203 QAALDKFLAEMKAIGPVTLYIEGHTDT---SGPNDYNAELSRRRAENVRTDLRQQGMTVG 259

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           E +  ++     + L +A+        NRR+ I+
Sbjct: 260 EVKDLQLLAKGENDLAVATGDGVKEQQNRRVVII 293


>gi|188994592|ref|YP_001928844.1| outer membrane protein 40 precursor [Porphyromonas gingivalis ATCC
           33277]
 gi|53828383|dbj|BAD54750.1| hypothetical protein [Porphyromonas gingivalis]
 gi|188594272|dbj|BAG33247.1| outer membrane protein 40 precursor [Porphyromonas gingivalis ATCC
           33277]
          Length = 380

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 12/152 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPE 247
             + DL  +I+S L G V +   + V           ++          F  +S+     
Sbjct: 235 ALVNDLNNQINS-LRGQVEELSRRPVSCPECPEPTQPTVTRVVVDNVVYFRINSAKIDRN 293

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             + +    E    +   I + G+ D       A  N +LS  RA +  ++L K GVS D
Sbjct: 294 QEINVYNTAEYAKTNNAPIKVVGYADEK--TGTAAYNMKLSERRAKAVAKMLEKYGVSAD 351

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           RI  I               N+ NR   I+V 
Sbjct: 352 RI-TIEWKGSSEQIY---EENAWNR---IVVM 376


>gi|86148944|ref|ZP_01067176.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88597451|ref|ZP_01100686.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218561995|ref|YP_002343774.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85840302|gb|EAQ57559.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190512|gb|EAQ94486.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359701|emb|CAL34487.1| putative flagellar motor protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925608|gb|ADC27960.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927861|gb|EFV07186.1| ompA family protein [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315928678|gb|EFV07961.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305]
          Length = 247

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +        ++     +   +++       +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           + +++  +     F++ S+  +   I    K    L         I IRG+TD S     
Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQTLENNRVEIY 221


>gi|260889796|ref|ZP_05901059.1| OmpA family protein [Leptotrichia hofstadii F0254]
 gi|260860402|gb|EEX74902.1| OmpA family protein [Leptotrichia hofstadii F0254]
          Length = 231

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVL 252
           I+     +                   I  +D+    +      F  +           +
Sbjct: 62  IAKKNLEIANKLPKLCPDGAICENWTTIRFVDKDGKIVKMIIRGFPVNKEEVTEIEKREI 121

Query: 253 QKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-R 308
           +   E L +     E   I G+ D +      ++   LSL RA    + L ++G+ +D +
Sbjct: 122 KDEIEYLLNVFLENEEFVIVGYADET-----EKNKKELSLSRAEKMAEFLKQNGLRKDIK 176

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
           ISKI+G +       +D       NRR++I +++ +
Sbjct: 177 ISKITGKSSENPVDTNDTEIGRYNNRRVEIFLKNGK 212


>gi|5759277|gb|AAD51067.1|AF175714_1 immunoreactive 43kD antigen PG32 [Porphyromonas gingivalis]
          Length = 391

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           ++  L  ++       V+      V   T    IL          +F   S +   + ++
Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
            L  + + +  + E +++ G+ D +      + N +LS  RA +   VL  K GV  + +
Sbjct: 309 NLYDVAQFVKETNEPVTVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364

Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337
             +       +         + N R+ I+
Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388


>gi|190892104|ref|YP_001978646.1| outer membrane protein, OmpA family [Rhizobium etli CIAT 652]
 gi|190697383|gb|ACE91468.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
           652]
          Length = 722

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 13/201 (6%)

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
           ++  R+S          D ++   ++    LPP+     L+        D  +     LS
Sbjct: 512 DARGRESVLYYSPDLYEDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLS 571

Query: 205 GLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259
               + + +    +  +    I         +T  F   S+         L+K+ + +  
Sbjct: 572 EPPVEPVERVYSLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQ 631

Query: 260 ---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315
                 +E   I GHTDA       + N  LS  RA S   VL    G+  + +    G+
Sbjct: 632 VLKKDPSETFLIEGHTDAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGY 687

Query: 316 AHHRLKIASDPMNSANRRIDI 336
               LK+ +      NRR+ I
Sbjct: 688 GERYLKVNTAGPEQENRRVTI 708


>gi|239995972|ref|ZP_04716496.1| peptidoglycan-associated lipoprotein [Alteromonas macleodii ATCC
           27126]
          Length = 188

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 7/161 (4%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
           P   +      +  +       +     +  V     + +  +       +  +    T 
Sbjct: 26  PSEEELAAERNRLAQEQAAAEAEAREAEAQRVKAEAAQRMKRQEEMVQQEMEALKNEQTV 85

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L K    L  + +  ++I GHTD+         N  L   RA S
Sbjct: 86  YFDFDRSSIKPEFQRILDKHAAFLVKNPSTKVTIEGHTDSR---GTPEYNIALGERRAQS 142

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
               L+ +GVS  +++ +S +   +  +        + NRR
Sbjct: 143 VETYLLNAGVSSSQVTVVS-YGEEKPAVMGSTEYAFAQNRR 182


>gi|307726627|ref|YP_003909840.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307587152|gb|ADN60549.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 367

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 237 FDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAY 293
           FD+      LP     L ++   L    +V +IR  G+TD          N +LS  RA 
Sbjct: 237 FDRGDLGGMLPAGKAKLDQLIRDLKQVDDVTAIRIAGYTDRL---GSDSYNRQLSTKRAE 293

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDI 336
           +  + L   GV+        G       +     N        +ANRR+++
Sbjct: 294 TVKRYLQNGGVTTP--ISARGRGKDNPVVECHDANRQALIDCLAANRRVEL 342


>gi|294678953|ref|YP_003579568.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294477773|gb|ADE87161.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 311

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S         L  + + LA   E  I++ GHTD          N  LS DRA + 
Sbjct: 205 FASGASQLAEGDFASLSALADYLATRPEARIALVGHTDN---SGALAANIALSRDRAAAV 261

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            + L++  GV   ++S   G      + ++        NRR++ ++
Sbjct: 262 RKRLIEKLGVPAGQLSA-EGAGWLSPRSSNLTPEGRDKNRRVEAVL 306


>gi|207110190|ref|ZP_03244352.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1]
          Length = 109

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++  F         
Sbjct: 3   KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
                     PP+   + +   S        + + K 
Sbjct: 62  PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98


>gi|6119896|gb|AAF04276.1|AF181881_2 PAL [Helicobacter pylori]
          Length = 157

 Score = 66.9 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 56  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 112

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K A         NRR+D+ +
Sbjct: 113 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 155


>gi|283798975|ref|ZP_06348128.1| outer membrane protein [Clostridium sp. M62/1]
 gi|291073265|gb|EFE10629.1| outer membrane protein [Clostridium sp. M62/1]
          Length = 294

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +        FD   +   P+ + +L +  E+L  +    + + GHTD          N
Sbjct: 214 VPVSIDLKGVNFDFDKATLRPDAVAILNEAAEILKRNPSLRVEVAGHTD---LCGKDAYN 270

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDR 308
            +LS  RA + Y  L  +GV   R
Sbjct: 271 QKLSERRAKAVYDFLTSNGVDAGR 294


>gi|254294751|ref|YP_003060774.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
 gi|254043282|gb|ACT60077.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
          Length = 181

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 32/103 (31%), Gaps = 7/103 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +   +D            VL +    L     V   I G+ D          N  L   R
Sbjct: 71  SKIFYDVDQYSLDDADRQVLARQAAWLNTYPGVSILIAGNCDER---GTREYNIALGERR 127

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332
           A +A   LM  GVS  RI  +S +   R         +   NR
Sbjct: 128 AAAAKDYLMGLGVSAARIETVS-YGKERPTDPRSTTEAWSVNR 169


>gi|83646354|ref|YP_434789.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
 gi|83634397|gb|ABC30364.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
          Length = 263

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 47/208 (22%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             S++   A+K   + + + K I   +   + +  +  V      T + I      +   
Sbjct: 47  QKSEQWDDAIKEIAKAEQVRKDILREIEQELNEKNIP-VKISDNDTVLRI----PEDVLT 101

Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284
           F +       + +                         + I + GHTD  P+RN + + N
Sbjct: 102 FRQGRFDIPKDQLHQDIALEIGKVLFHTISKNSRWQYLDTIFVEGHTDKVPYRNSSIKGN 161

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDR-----------ISKISGFAHHRLK-----IASDP-- 326
           W LS  RA S +          +R           +  +SG+A  R         +    
Sbjct: 162 WGLSTFRAISVWNFWNTMLEENERLGSLKNHMGKTLFSVSGYADTRPVPCTNADPNVTLK 221

Query: 327 ------------MNSANRRIDILVEDRQ 342
                           NRRIDI    R+
Sbjct: 222 ELCPVGVLEESESQQKNRRIDIRFTVRR 249


>gi|149190367|ref|ZP_01868639.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
 gi|148835746|gb|EDL52711.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
          Length = 294

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 12/155 (7%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              + R + +   +SS L     +     +      +   IS         +D++S    
Sbjct: 141 QDWQSRDERIEVSLSSVLFQAKYNVFSDCIANLLPYSFEDISFTILH----YDRNSEQLN 196

Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             +   L++I E + ++ ++  +    +TD+S  +  +    +LS  RA          G
Sbjct: 197 KTSQHRLEQIAEYVRYNQDIDLVLVSTYTDSSDSKGES---QQLSDKRASILQDYFQSLG 253

Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
           + +DRI ++ G+   R    +      + N+R+ I
Sbjct: 254 LPKDRI-QVQGYGKRRPVAENSSPIGKAKNQRVVI 287


>gi|57237387|ref|YP_178400.1| flagellar motor protein MotB [Campylobacter jejuni RM1221]
 gi|86151261|ref|ZP_01069476.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|86153764|ref|ZP_01071967.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121612816|ref|YP_001000046.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148926431|ref|ZP_01810114.1| putative flagellar motor protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414633|ref|YP_001481889.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167005002|ref|ZP_02270760.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205356014|ref|ZP_03222782.1| putative flagellar motor protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315123901|ref|YP_004065905.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|57166191|gb|AAW34970.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
 gi|85841608|gb|EAQ58855.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85842725|gb|EAQ59937.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87250338|gb|EAQ73296.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|145844594|gb|EDK21700.1| putative flagellar motor protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385597|gb|ABV51912.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346138|gb|EDZ32773.1| putative flagellar motor protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|307747273|gb|ADN90543.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315017623|gb|ADT65716.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315931586|gb|EFV10552.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327]
          Length = 247

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +        ++     +   +++       +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           + +++  +     F++ S+  +   I    K    L         I IRG+TD S     
Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221


>gi|260467067|ref|ZP_05813247.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029176|gb|EEW30472.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
           WSM2075]
          Length = 168

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + L    +  I + GH D          N  L   R
Sbjct: 59  DRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   L+  GV+  R+  IS +   R           S NRR
Sbjct: 116 AAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158


>gi|115360985|ref|YP_778122.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115286313|gb|ABI91788.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
          Length = 264

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWR 286
           ++  +F    S      P     L    E +    E+    + GHTD       +  N  
Sbjct: 145 QSDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRI---GPSTVNEP 201

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338
           LS  RA +    L+  G++   I +  G    +         S         +RR+ I V
Sbjct: 202 LSRARAQTVRGYLISHGLNGS-IIEAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISV 260

Query: 339 EDRQ 342
             R 
Sbjct: 261 SGRN 264


>gi|162455833|ref|YP_001618200.1| OmpA-like domain-containing protein [Sorangium cellulosum 'So ce
           56']
 gi|161166415|emb|CAN97720.1| OmpA-like outer membrane domain protein [Sorangium cellulosum 'So
           ce 56']
          Length = 689

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 13/279 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           +P GK          D     +    N  +    +       +   G  +        + 
Sbjct: 398 SPPGKYGCPDPDNDEDGILDVDDRCPNNPEDRDGDEDDDGCPEGSDGDRDGDGILDSRDK 457

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                 +    +        D++K     KS          +++       E        
Sbjct: 458 CPDDPEDRDGFQDKDGCPDPDNDKDGIPDKSDQCPNDPEDRDDFEDEDGCPEPDNDRDGI 517

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             + D       T +GL  ++              ++ +        F   S+  LPE+ 
Sbjct: 518 PDVVDKCPNDPETFNGLEDEDGCPDKGSVVIEENNIVIL----EKIQFATGSAEILPESF 573

Query: 250 VVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
            ++Q + E L H  E   I   GH D     +    N +L+  RA +    L + GV+++
Sbjct: 574 GIVQAVAETLKHHPEFTMIEVQGHADER---SADAYNLKLTQARADAVAAALAQRGVNKN 630

Query: 308 RISKISGFAHHRLKIA--SDPMNSANRRIDI-LVEDRQG 343
            +  + G+  +       +      NRR++  +V   +G
Sbjct: 631 SVRSM-GYGEYCPIDPAHNAAAWEKNRRVEFKVVRTDKG 668


>gi|261749326|ref|YP_003257011.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497418|gb|ACX83868.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 408

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
             +FD       P ++ ++ +I E++          I G+TD+         N  LS  R
Sbjct: 310 PILFDLGKFTLSPNSLEIIDEIYEIMIKKLPNSKFYINGYTDSY---GKHSYNKILSTRR 366

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           A S ++ L+  G+   R+ +I                +  R ++I +   
Sbjct: 367 ANSVFEALVSKGIDPSRM-EIRKLGKSV-------KRNKGRLVEITIRRS 408


>gi|166714360|gb|ABY87946.1| outer membrane protein [Acinetobacter sp. wpo2421]
          Length = 319

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S   P+    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 233 RVFFDTNKSDIKPQYKSEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 289

Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322
            S    L+ +  V   R+S   GFA  +   
Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIA 319


>gi|126661868|ref|ZP_01732867.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
 gi|126625247|gb|EAZ95936.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
          Length = 274

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            K  ++  ++     +    ++ ++       + ++ G+ I + +      F +++   +
Sbjct: 122 EKDLEKENEVLGIKEAEPEVIIPEDATLAEKVKLSKVGMKIVLKNIN----FYQNTFATM 177

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           PE+   L  +  ++ ++ E  I I+GH            N  LS DRA    + L+ +G+
Sbjct: 178 PESQGTLYDLLFIMQNNPELKIEIQGHICCID---KDYRN--LSTDRAKQIKRFLVYNGI 232

Query: 305 SEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341
            + R+    GF   +        +    + NRR++I +  +
Sbjct: 233 QDYRVKT-KGFGVSQPIHPIPEATPEQAAENRRVEIEILSK 272


>gi|91204944|ref|YP_537299.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
           RML369-C]
 gi|157827728|ref|YP_001496792.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
           OSU 85-389]
 gi|91068488|gb|ABE04210.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
           RML369-C]
 gi|157803032|gb|ABV79755.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
           OSU 85-389]
          Length = 155

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +SS    +    LQ+    L+       ++ GH D          N  L   RA  A
Sbjct: 53  FAFNSSALSEKAKEELQRQACWLSRHPHVKATVEGHCDDR---GTREYNLALGERRAQKA 109

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337
            + L   G+   R+S IS +   RL +  +     + NRR + ++
Sbjct: 110 AEFLRHKGIEHHRVSTIS-YGKDRLAMMGNTEEAHAYNRRAVTVV 153


>gi|13473329|ref|NP_104896.1| peptidoglycan-associated lipoprotein precursor [Mesorhizobium loti
           MAFF303099]
 gi|22653894|sp|Q98F85|OMP16_RHILO RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
           Precursor
 gi|14024078|dbj|BAB50682.1| mll3887 [Mesorhizobium loti MAFF303099]
          Length = 168

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + L    +  I + GH D          N  L   R
Sbjct: 59  DRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   L+  GV+  R+  IS +   R           S NRR
Sbjct: 116 AAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158


>gi|110637108|ref|YP_677315.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110279789|gb|ABG57975.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 841

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 8/115 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           Q+ +  FD   SI        L  +           I + GHTD++        N +LS 
Sbjct: 19  QQLSVFFDSGKSILSEREKQRLDSLIYTFETELIYDIRLVGHTDST---GYPEKNKQLSK 75

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            RA + Y  L K        S I+G        A+        NRR DI +    
Sbjct: 76  ARAIAVYTYLSKR--KNIHFSSITGKGSLSPVQANTTDAGRAHNRRCDISITVSN 128


>gi|187250865|ref|YP_001875347.1| outer membrane protein [Elusimicrobium minutum Pei191]
 gi|186971025|gb|ACC98010.1| Outer membrane protein [Elusimicrobium minutum Pei191]
          Length = 993

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I        +  +S     +   ++++    L       I + G+TD          N  
Sbjct: 883 IQFNSRDMEYQFNSCELTEKQKNIIREKCAALKDFPYTKIIVTGNTDNI---GSYGVNKS 939

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
           +SL RA +A ++L++ G++ D I +I G A+      +      + NRR DIL+ 
Sbjct: 940 ISLRRANAAAKILIEEGLNPDTI-EIMGVAYDNPVTGNLTREGRAMNRRTDILIL 993


>gi|330953391|gb|EGH53651.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 447

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 11/173 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                    + ++   +    Q +  +       +    +            +       
Sbjct: 281 PTSAHQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
                F + S+    +    L+++ + L         +++ G  DA      A     LS
Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RA +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|320577070|gb|ADW54044.1| outer membrane protein A [Sodalis glossinidius]
          Length = 267

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   +   PE    L ++   L+        + + G+TD        + N +LS
Sbjct: 188 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 244

Query: 289 LDRAYSAYQVLMKSGVSEDRISK 311
            +RA S    L+  G+  D+IS 
Sbjct: 245 QERAQSVVSYLVSKGIPSDKISA 267


>gi|217034805|ref|ZP_03440196.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
 gi|216942664|gb|EEC22235.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
          Length = 157

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 56  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 112

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 113 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 155


>gi|227822263|ref|YP_002826234.1| OmpA family protein [Sinorhizobium fredii NGR234]
 gi|227341263|gb|ACP25481.1| OmpA family protein [Sinorhizobium fredii NGR234]
          Length = 758

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 66/195 (33%), Gaps = 13/195 (6%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           SE         + ++    +  Y LPP+     +        +D  +     LS    + 
Sbjct: 555 SEYVMMYTPEYEDDRPAIVDVGYELPPMRLGIPVDEYIVDVAEDPDRDYYEFLSEPPVEQ 614

Query: 211 IVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHS 262
           + +    +  R    +         +T  F   S+         L+ + + +        
Sbjct: 615 VERVYTIDEVRNSARLRDKVRRIDLDTIEFATGSAEVSMSQAKTLRNVADAMSKVLEKDP 674

Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321
            E   I GHTDA       R N  LS +RA S   +L +  GV  + +    G+    LK
Sbjct: 675 GETFFIEGHTDAV---GSDRSNLVLSDERAESVAVLLTEVYGVPAENLVT-QGYGERFLK 730

Query: 322 IASDPMNSANRRIDI 336
           I +      NRR+ I
Sbjct: 731 IRTPEAEQENRRVTI 745


>gi|84502861|ref|ZP_01000974.1| OmpA family protein [Oceanicola batsensis HTCC2597]
 gi|84388844|gb|EAQ01714.1| OmpA family protein [Oceanicola batsensis HTCC2597]
          Length = 191

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F        P     L +  +  + +     I GHTD+         N RLS +RA + 
Sbjct: 93  FFATDKYYISPANRQRLAEFFK--SSTATAFIIAGHTDSR---ASDEYNMRLSYNRANAV 147

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
            +V   +G    RI+ + G+        ++     + NRR++I+
Sbjct: 148 ARVAAATG---ARIADVRGYGERMPAATNNTRAGMAKNRRVEII 188


>gi|330503247|ref|YP_004380116.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328917533|gb|AEB58364.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 460

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHT 272
              T    +            F + S+    +    LQ++ + L         + + G  
Sbjct: 338 QMPTDYRQLAQQAQRLSVNFRFQEGSATLDNKAHRDLQRVLDYLRQHDKLQNKVVLVGFG 397

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--A 330
           D       A     LS  RA +  + L K GV      +I+G        A+D  N    
Sbjct: 398 DPKNDPERAEL---LSKLRAMAVRRELAKQGVL---FREITGLGSELPVAANDQDNGRIR 451

Query: 331 NRRIDILV 338
           NRR+++ V
Sbjct: 452 NRRVEVWV 459


>gi|153952261|ref|YP_001398613.1| flagellar motor protein MotB [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939707|gb|ABS44448.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 247

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  ASKGIFDEQNPPERSSQNKID----LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +     +     + +  +            +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQKKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQIALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERSSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQKKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           I +++  +     F++SS+  +   I    K    L         I IRG+TD S     
Sbjct: 113 IALNLPSKVE---FERSSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221


>gi|89889717|ref|ZP_01201228.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
 gi|89517990|gb|EAS20646.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
          Length = 352

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 10/116 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR--- 286
           +    +F K  S  L E+  +L ++ E+L    +    I GH            N     
Sbjct: 235 RLENILFYKGRSTILEESQPLLDRVAEILIAREDIHFEIHGHVCCINPAYPDAYNRDTKK 294

Query: 287 --LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             LS  RA + Y++L   GV   R+ +  G+   R     D ++   RR+++ +  
Sbjct: 295 SNLSHARALAIYKILRSRGVKHTRM-RFKGYGRTRPLGGIDKLD---RRVELYITK 346



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 10/111 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  FD             L    + L       + I G+ D          N  LS  R
Sbjct: 24  HSVYFDVDKDQFSFSEGKQLTSFFDDLIYKPILTVKILGYCDDR---GSHEYNLDLSNRR 80

Query: 292 AYSAYQVLMKSGVSEDRIS-KISGFAH---HRLKIASDPM--NSANRRIDI 336
             +  + L    +  + IS K+ G             +     + NRR+D+
Sbjct: 81  VETVSEWLENHDIELENISKKVEGLGEVALEDELDFQETEEIRAQNRRVDV 131


>gi|42524629|ref|NP_970009.1| chemotaxis MotB protein [Bdellovibrio bacteriovorus HD100]
 gi|39576839|emb|CAE78068.1| chemotaxis MotB protein [Bdellovibrio bacteriovorus HD100]
          Length = 318

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69
          E  Q I+IKK +      +  GSWK+  ADFMT LMAFFLVMW++    ++TKKA+  YF
Sbjct: 3  EKKQTIVIKKIIVSGGGHH-GGSWKVALADFMTALMAFFLVMWLVGQ-SEETKKAVSDYF 60

Query: 70 NPFGKNLM 77
          +       
Sbjct: 61 STPSVIEY 68


>gi|302532142|ref|ZP_07284484.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
 gi|302441037|gb|EFL12853.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
          Length = 214

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
           ++  +F K S+         + ++ + +  +    + + G TD             LS  
Sbjct: 102 QSEVLFAKDSAELSGAAGARIAEVAQEIRQNSPRKVMVCGFTDNL---GTYAHGKTLSTQ 158

Query: 291 RAYSAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA + ++ L    +S   I+ ++ G +       +        NRR++I
Sbjct: 159 RAEAVHKALAAQ-LSASGIAYEVVGKSEDDPIADNSTEEGRKKNRRVEI 206


>gi|237800676|ref|ZP_04589137.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023535|gb|EGI03592.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 446

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/244 (11%), Positives = 69/244 (28%), Gaps = 18/244 (7%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
                   + V   +                  +++ +       +    +E      + 
Sbjct: 216 FESSEQLSDEVSKDVNGIGFTGLPSVRHARAVAIADGESRPMLPTTSLIATEDYPLSRRL 275

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
                    +          +         R   +A+ + +      A            
Sbjct: 276 YLYVPPAGHQRWAQALVHFAQSADGQAIVARSGFVAQTVQALKVQPTAQMPADYQALTRK 335

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF 277
              + ++         F + S+    +    L+++ + L       + +++ G  DA   
Sbjct: 336 ADRLSVNFR-------FAQGSARLDNKAQQDLKRVADYLKAQDKLDQHVTLVGFGDAKSD 388

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335
              A     LS  RA +  + L+KSGV+     +I G         +D  +    NRR++
Sbjct: 389 PARATL---LSRLRAMAVRRELLKSGVT---FREILGLGDEMPVANNDIDDGRIKNRRVE 442

Query: 336 ILVE 339
           + V+
Sbjct: 443 VWVQ 446


>gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
 gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
          Length = 347

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 17/120 (14%)

Query: 232 RNTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  MF   S+    E    I  L    ++ + +     + G++D +     A  N  LS
Sbjct: 229 KSDVMFGYDSATLTNEGKAAINQLYHSPDLQSATGNTTLVIGYSDRT---GSASYNQALS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS-AN-----RRIDILV 338
             RA +  + L+  G+S + I +  G             +   ++  N     RR+ + +
Sbjct: 286 ARRAQAVAEQLIGLGMSAENI-RTEGRGATDSVTGNTCDNMTGSALKNCLSPDRRVVVQI 344


>gi|257487833|ref|ZP_05641874.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331008545|gb|EGH88601.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 447

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               + ++   +    Q +  +       + A  +            +            
Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|117925243|ref|YP_865860.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117608999|gb|ABK44454.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
          Length = 257

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 15/194 (7%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           K      D       E+   +P  +         +  L  L +K+ + L  +V +   + 
Sbjct: 46  KVSGSMKDAFGVQRIEQINAIPTGNTIIAPEFASEMVLVQLREKVENVLGPMVDNGEAEM 105

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST----EVISIRG 270
              +      + S         F   +          L +I  +L          I I  
Sbjct: 106 YTDQDGFVMQIDS------DTTFVPGTLQLSDTFQAKLTEICNILTTHPDTKNNKIRIIA 159

Query: 271 HTDASPFRNIA-RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM- 327
           HTD +P        NW LS  +A +    +  + GV   R+ ++        K ++D   
Sbjct: 160 HTDTTPPPGGMLPTNWALSAAQAAAVVGYMSTQGGVDPVRL-EVRAKGEFAPKESNDTAD 218

Query: 328 -NSANRRIDILVED 340
             S NRRI+IL+  
Sbjct: 219 GRSKNRRIEILISR 232


>gi|327480142|gb|AEA83452.1| putative outer membrane protein [Pseudomonas stutzeri DSM 4166]
          Length = 209

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 11/167 (6%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
               ++K          +     +      L    +      E     ++++        
Sbjct: 20  SSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFEVERRDNVLVVT---APVDS 76

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            F+      L    +        L        + I GH D++        N  +S +RA 
Sbjct: 77  SFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADST---GADDVNRTISRERAS 133

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +   +   SG   DR+ +I G      + A+D       NRR+++++
Sbjct: 134 AVAAIFRLSGFKHDRL-RIRGLGSDMPRAANDSKEGRAMNRRVEMVL 179


>gi|315057756|gb|ADT72085.1| Flagellar motor rotation protein MotB [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 247

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61

Query: 79  AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            +        ++     +   +++       +T+     ++ +   +   Q   N    +
Sbjct: 62  QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
              + S    ++  +D  K      +    ++  +   Y     S  +   +  ++    
Sbjct: 122 EFERGSAQIVSADIQDYLKRIAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181

Query: 195 LAKKIS 200
           L   I 
Sbjct: 182 LKYFIE 187



 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  +          K K  A +    L+ L +   +    +           + +   
Sbjct: 57  DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280
           + +++  +     F++ S+  +   I    K    L         I IRG+TD S     
Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRIAELTTYLPPQAKIEIRGYTDNSDSIIR 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     L+  RA +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221


>gi|71734119|ref|YP_274824.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71554672|gb|AAZ33883.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 447

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               + ++   +    Q +  +       + A  +            +            
Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|146340837|ref|YP_001205885.1| hypothetical protein BRADO3900 [Bradyrhizobium sp. ORS278]
 gi|146193643|emb|CAL77660.1| conserved hypothetical protein; putative outer membrane protein
           with periplasmic-binding domain (ABC-type)
           [Bradyrhizobium sp. ORS278]
          Length = 550

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 8/131 (6%)

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270
            K          +         +  F  +S          L ++ + L  + +  + + G
Sbjct: 393 AKWTGNPQEFCRLRTQARALDVSFRFQTNSVELDNLAAPNLFRVMQALRETPQARLLLAG 452

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329
             D        + N RLSL RA S  Q L   GVS        G+        +      
Sbjct: 453 FADRR---GNYQANCRLSLQRAESVKQSLASLGVSN---VDTRGYCDEVPVRDNGGDEFE 506

Query: 330 ANRRIDILVED 340
            NRR++I +  
Sbjct: 507 KNRRVEIYLLS 517


>gi|86358030|ref|YP_469922.1| OmpA family membrane protein [Rhizobium etli CFN 42]
 gi|86282132|gb|ABC91195.1| putative outer membrane protein, OmpA family [Rhizobium etli CFN
           42]
          Length = 738

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 13/185 (7%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
            D ++    +    LPP+     L         D  +     LS    + + +    +  
Sbjct: 544 EDPDRGYFDDPGADLPPMRLRVPLNDYIIDTSSDPDRDYYEFLSEPPVEQVERVYSLDEV 603

Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHT 272
           R    I         +T  F   S+         L+K+ + +        +E   I GHT
Sbjct: 604 RYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLKKDPSETFLIEGHT 663

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331
           DA       + N  LS  RA S   VL    G+  + +    G+    LK+ +      N
Sbjct: 664 DAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGYGERYLKVNTPGPEQEN 719

Query: 332 RRIDI 336
           RR+ I
Sbjct: 720 RRVTI 724


>gi|330985312|gb|EGH83415.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 447

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               + ++   +    Q +  +       + A  +            +            
Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|221134028|ref|ZP_03560333.1| outer membrane protein [Glaciecola sp. HTCC2999]
          Length = 249

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 69/235 (29%), Gaps = 18/235 (7%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
             T  S   ++       + +    +      +             +  G  L      E
Sbjct: 18  SFTSISASAQVADAVTTYKNEPATTHTNIGFGTGLVAGAALGGPVGAIIGATLGVLMVEE 77

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            + ++        L         + + +  L + +               +      T  
Sbjct: 78  HNDDQHIATLKTDLLAAYDHHQTQAQTIAQLQQMVDE-----------PVIQQVNYTTPS 126

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARD 283
           +    + ++   F    S         L  + +VL       +++ G  D    R    D
Sbjct: 127 VFDFPEMQSHIQFTTGISEVASAYHGQLALLAQVLTKQPQLQVTLTGFAD---LRGTDDD 183

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           N  LS  R  +   +L+K GVSED+I  I+     R    S+   S   +RR+ I
Sbjct: 184 NLALSSARVAAVKSMLVKEGVSEDQIKTIA-LGEARALQTSNWDESLVFDRRVTI 237


>gi|300716387|ref|YP_003741190.1| outer membrane protein [Erwinia billingiae Eb661]
 gi|299062223|emb|CAX59340.1| predicted outer membrane protein [Erwinia billingiae Eb661]
          Length = 294

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/279 (11%), Positives = 76/279 (27%), Gaps = 23/279 (8%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
             ++A  G F  Q         K    I      +             ++Q       + 
Sbjct: 22  VAVSAPAGTFYGQAYQPGMGVGKQQAQIIYFRAADVAGESAAHVYVDGEFQNALLTNSFT 81

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                    +    ++                   +  +     + +       + + + 
Sbjct: 82  RFCVSPGEHRLGAYQNDAPNYKGKTLAPKMALSGGKTYFMQVGSAADGRPVEVSEAQAES 141

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS---SSIPLPETIVV 251
           + K +   +  L   + V+    +      ++S        +F           P+    
Sbjct: 142 VLKGLHQQVHVLSRASAVQSCQLQPEYKEYVLS-----GDVLFKFGKSMRHDMTPQGRQA 196

Query: 252 LQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           + K+   L       + I + GHTD          N+ L   RA +  ++L+  G+    
Sbjct: 197 VGKLIGQLHEDHVNLDSIEVIGHTDPI---GKESSNYALGARRASTVREMLIDGGLPAAN 253

Query: 309 ISKISGFAHHRLKIASDPMNSA--------NRRIDILVE 339
           I   S     +  +AS   +          +RR+ + V+
Sbjct: 254 IQATSA-GSSQPLVASCSGSRQAQAACYAPDRRVVVRVK 291


>gi|49258621|pdb|1R1M|A Chain A, Structure Of The Ompa-Like Domain Of Rmpm From Neisseria
           Meningitidis
          Length = 164

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L   + + + + GHTD   F    + N  LS  RAY 
Sbjct: 18  LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 74

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
               L+ +GV   RIS + G    +
Sbjct: 75  VANNLVSNGVPVSRISAV-GLGESQ 98


>gi|320324614|gb|EFW80691.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 447

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               + ++   +    Q +  +       + A  +            +            
Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|291615184|ref|YP_003525341.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291585296|gb|ADE12954.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 185

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                  + GHTD+      A  N  LS  RA    + L+  GV    I  + G    ++
Sbjct: 107 QKGFKFIVSGHTDS---SGDATKNKELSARRARVMVKELIAQGVDAGDIEAV-GMGSEKM 162

Query: 321 KI-ASDPMN--SANRRIDILVE 339
            +   +     + NRR ++ V 
Sbjct: 163 LVKPDNTPAKKAKNRRYEVQVR 184


>gi|330827372|ref|YP_004390610.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329312680|gb|AEB87094.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 351

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 74/267 (27%), Gaps = 12/267 (4%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L   +            +S     ++    +      + +          ++ +     
Sbjct: 83  ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                   C     +    G          K+  + +   L  L    +  +  +     
Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLAKLDAHTVATLAIRAEADA 202

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQ 253
           +    +     +     V  V         + +        + F  S +    E    L 
Sbjct: 203 IPAGSAQLTDDVRP---VTVVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAKRNLS 259

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           ++   LA + E + IRG TD++        N  L++ RA +      + GV   ++    
Sbjct: 260 ELLP-LAMTAERVLIRGRTDST---GTVAGNRALAIARAATVRAAFARGGVDPRKLK--V 313

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILV 338
            +       ++D       NRR+++ +
Sbjct: 314 SYCVTCFVASNDTEAGRSANRRVEVEL 340


>gi|284050116|ref|ZP_06380326.1| hypothetical protein AplaP_01445 [Arthrospira platensis str.
           Paraca]
          Length = 179

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + ++          ++  + + I  +   N   F+  S+   P+ + ++ KI E L    
Sbjct: 36  AQIIPAAFENIPGIKSVFSTLKIDPVRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYP 95

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +  + I GHTD    R  A  N +L+L+RA +    L K G+   R+  +    + + 
Sbjct: 96  QLSLRIIGHTD---LRGNAARNQQLALNRAIAVRDALTKQGIDPKRLEVV---GNSQP 147


>gi|194295652|gb|ACF40853.1| outer membrane protein [Riemerella anatipestifer]
          Length = 270

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 62/248 (25%), Gaps = 21/248 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D       T      +             ++N  
Sbjct: 42  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPKFQGCPDTDGDGVPDKDDNCP 101

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +    E+   L
Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 205

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GHTD    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262

Query: 312 ISGFAHHR 319
             G     
Sbjct: 263 -KGVGSAE 269


>gi|163731712|ref|ZP_02139159.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
 gi|161395166|gb|EDQ19488.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
          Length = 344

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 98/328 (29%), Gaps = 25/328 (7%)

Query: 20  KVAIDDTPNNLGSWKIVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +           S  I   D  +++L    +++    +     +      +      L  
Sbjct: 5   RHHARYGDEEDESAFISMTDMTVSILFIVLILLAFFASQLRPEQTVTVSEYERVVAQLDE 64

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
               +   Q+  E  +   +D++    + ++ + L    TN + +  R E+    +   +
Sbjct: 65  REAQLRVAQSAIEDWTDGTLDVATLLRLREDVLRLTTEVTNLQARAGRSEDLEQDIVVLR 124

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
           +  +   +     E       ++ + +            +++E      R    +D  + 
Sbjct: 125 EELNRARTQLSLIEVNPLEMYNSSVAQERENLLTSLRDQIAEEFPELGVRVSDGKDALQF 184

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
               L    +  +  G   +         I D  +  +                      
Sbjct: 185 QGEGLFASGSPRLSAGSQIKIE------RIADLIHAVL-----PCYTMGPQSAYDAQCNP 233

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--GVSEDR------IS 310
                E + I GHTD+      A  N  LS  RA + Y  ++    G++  +      + 
Sbjct: 234 SFAIVEALQIEGHTDSD---GSANANVSLSSQRAATTYGAMISHQPGLNIHQNFTDQPVL 290

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDI 336
            ++G+   R    +        NRRID+
Sbjct: 291 SVAGYGEDRPVTLNSSPEGKSANRRIDL 318


>gi|330890787|gb|EGH23448.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
          Length = 447

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
               + ++   +    Q +  +       + A  +            +            
Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F + S+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447


>gi|91218699|ref|ZP_01255595.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
 gi|91183150|gb|EAS69597.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
          Length = 197

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 13/105 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       P+  V LQKI   +       I +R HTD+         N  LS  RA + 
Sbjct: 97  FDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSR---AGDEYNQILSNKRAKAT 153

Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIA-------SDPMNSANR 332
              +++   +S +RI    G+   +L          S+  ++ NR
Sbjct: 154 INYIIEKSRISSERI-SGRGYGESQLVNKCSNGIDCSESEHALNR 197


>gi|170726476|ref|YP_001760502.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169811823|gb|ACA86407.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
          Length = 238

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 20/193 (10%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
              G  +   T      +  ++  +     +       K+ L  +A +       L    
Sbjct: 50  GPVGAIIGAFTGALLGKSVGDDSEIDAQHAKIAALSSDKQSLLVIADQYDEAQQQLAELK 109

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
           + +         G+ I          F   SS   P     L  +   +  S E  + + 
Sbjct: 110 LAQDQKLTELAMGLNIQ---------FKTGSSELAPHIKRQLDDLAYAITISPELRLDMT 160

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+ D       +  N  LS  R       L+  GV E R+     F              
Sbjct: 161 GYADRR---GDSTYNQALSEQRVAEVKSYLVSQGVDESRL-SYKAFGASAPLTEDQSFE- 215

Query: 330 AN----RRIDILV 338
            N    RR++I +
Sbjct: 216 -NDFFDRRVNIKL 227


>gi|308273805|emb|CBX30406.1| hypothetical protein N47_Q17290 [uncultured Desulfobacterium sp.]
          Length = 185

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289
           Q     FD  S+    E+  ++  I + +         + GHTD          N+ LS+
Sbjct: 78  QSFILYFDFDSNNLTAESNKLIDDILQAIKERDSQDIPVVGHTDR---AGNPDYNFSLSM 134

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            RA +   +L+  G+  +   +IS        I +
Sbjct: 135 QRATAVRDLLVNRGIKSE-FIQISSHGEGNPLIPT 168


>gi|307266869|ref|ZP_07548390.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918116|gb|EFN48369.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 230

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 25/183 (13%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +        +K ++ DL    +  +  L+ +     +          IS  +      FD
Sbjct: 37  AAIAAELSLQKAKVDDLIGVRARIIDQLLKEFSNSDMTLNIDPQTGAISFSE---GVFFD 93

Query: 239 KSSSIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           K       E    L +         +          I + GHTD +        N  LS 
Sbjct: 94  KDKFELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDT---GDYMYNLELSQ 150

Query: 290 DRAYSAYQVLMK---SGVSED------RISKISGFAHHRLKIASDP-MNSANRRIDILVE 339
            RA+   + +++    G+              +G ++ +L I +       +RR++    
Sbjct: 151 KRAFEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENGKVNRQKSRRVEFKFR 210

Query: 340 DRQ 342
            ++
Sbjct: 211 LKE 213


>gi|110635499|ref|YP_675707.1| OmpA/MotB [Mesorhizobium sp. BNC1]
 gi|110286483|gb|ABG64542.1| OmpA/MotB [Chelativorans sp. BNC1]
          Length = 172

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+   +    L +  + L        ++ GH D          N  L   R
Sbjct: 63  DRIFFDTDSSVIRADAQATLARQAQWLNQYPSYSVTVEGHADER---GTREYNLALGARR 119

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +A   L+  GV+ +RI  IS +   R           S NRR  + V +  G
Sbjct: 120 AAAARDFLVSRGVAANRIQTIS-YGKERPVAVCDDISCWSQNRRA-VTVLNGAG 171


>gi|317180858|dbj|BAJ58644.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
           F32]
          Length = 179

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
             L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCIQKTRECYKENRRVDVKL 177


>gi|313681893|ref|YP_004059631.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154753|gb|ADR33431.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
          Length = 177

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 8/105 (7%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +FD        +    + K   ++   T  I + G+ D          N+ L L RA S 
Sbjct: 78  LFDYDKFDIRADMQDAMAKNALLVKGKT--IKLEGNCDEF---GSDEYNFALGLKRANSV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
              L+ SG+S D I  +S                   NRR+D  +
Sbjct: 133 KAALVNSGISADSI-AMSSLGESNPVCLEKSKDCWQKNRRVDFKL 176


>gi|92119081|ref|YP_578810.1| OmpA/MotB [Nitrobacter hamburgensis X14]
 gi|91801975|gb|ABE64350.1| OmpA/MotB [Nitrobacter hamburgensis X14]
          Length = 673

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             +T  F   S    P+    L+ I + +        +EV  I GHTDA        DN 
Sbjct: 546 DLDTITFATGSWDIPPDQAAKLRVIADGINRAISRNPSEVFLIEGHTDAV---GNDVDNL 602

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA SA ++L +   V  + +    G+    LK+ +D  +  NRR+ +
Sbjct: 603 SLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKVETDGPSRENRRVTV 653


>gi|89073378|ref|ZP_01159902.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
 gi|89050865|gb|EAR56339.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
          Length = 166

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   ++  PE I  L      +   +  I I GHTD   ++     N  LSL R+++  
Sbjct: 63  FDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTD---YQGSDSYNEALSLRRSHAIE 119

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333
             L    + E     ++  F      +       N+ NRR
Sbjct: 120 SYLKAR-IDESHYHFEVKYFGEKNPIVKGHSLKSNALNRR 158


>gi|259908602|ref|YP_002648958.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
 gi|224964224|emb|CAX55731.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
 gi|283478573|emb|CAY74489.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
           DSM 12163]
          Length = 407

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 210 NIVKGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           ++ + +        + I+  D  N        +F    +   PE   ++ ++   +    
Sbjct: 254 DLRQRLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLK 313

Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             + I  +TD     +     N   S  +A +   ++++         +  G    +  +
Sbjct: 314 GTLLIAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLL 373

Query: 323 ASDPM--NSANRRIDILV 338
            ++     + NRR++I +
Sbjct: 374 PNNSASNRTQNRRVEITL 391


>gi|90579127|ref|ZP_01234937.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
 gi|90439960|gb|EAS65141.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
          Length = 166

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   ++  PE I  L      +   +  I I GHTD   ++     N  LSL R++   
Sbjct: 63  FDFDKAVLKPEDIKELDDFIAKIQLLSGDILIAGHTD---YQGSDSYNEALSLRRSHVIE 119

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333
           + L    + E     ++  F      +       N+ NRR
Sbjct: 120 RYLKAR-IDESHYHFEVKYFGEKNPIVKGHSLKANALNRR 158


>gi|223041650|ref|ZP_03611847.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
 gi|223017514|gb|EEF15928.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
          Length = 162

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   S+   +    L  I + +  +  + +++ G+TD       A  N +LS  R
Sbjct: 52  GDFLFDFDKSVLSAKGKSTLNGIAKEIKDTGAKNVTVTGYTDRL---GSATYNQKLSQAR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA------NRRIDIL 337
           A +    L   GVS + I  + G        A   +   +       NRR+ I+
Sbjct: 109 ANTTKAYLQSQGVSAN-IKAV-GRGAANQVKACKGETGQALKDCLKPNRRVHII 160


>gi|15606304|ref|NP_213683.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
 gi|2983508|gb|AAC07085.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
          Length = 224

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 18/157 (11%)

Query: 197 KKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
           K  +  +   ++  +             I + + D+     F+        +    L++I
Sbjct: 72  KDYAVKIKKRISKVLPPWAYQVVVAEEYIKLRLFDR---IFFENGDYKLTEKGRKTLEEI 128

Query: 256 GE---VLAHSTEVISIRGHT-DASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRIS 310
                 L+     I + GH       +N    N W L+  RA    + L   GV  D++ 
Sbjct: 129 APLLIALSDEISSIRVEGHVGPTVEIKNPIIRNKWELAGRRATEVIRYLENRGVPHDKLV 188

Query: 311 KISGFAHHRLKIASDPMNS-----ANRRIDILVEDRQ 342
            +S +   R                N R++I +  ++
Sbjct: 189 AVS-YGDKRPLYR---WRQSVLIERNNRVEINIYVKR 221



 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 28/68 (41%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81
             +      +W   ++D M++L+ FF++++ ++  +    +    YF    +     + 
Sbjct: 4  KKKEECPKPPAWLTSFSDLMSLLLTFFILLYAMSTLEIPALEKFLSYFRKNPELYPPKNS 63

Query: 82 GIFDEQNP 89
           +    +P
Sbjct: 64 VVPPITHP 71


>gi|329962616|ref|ZP_08300564.1| OmpA family protein [Bacteroides fluxus YIT 12057]
 gi|328529647|gb|EGF56545.1| OmpA family protein [Bacteroides fluxus YIT 12057]
          Length = 397

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 5/188 (2%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                +    LS     +     +  D      L  +  L             P    + 
Sbjct: 187 ISNAMDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLVSQA 246

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                + +L +L    +  L   +     + V        IL        T  F+  S+ 
Sbjct: 247 ELAIMQDQLAELGA-ANQQLQNALTAAQNQPVEEVAETEVILTDPDIAPRTVFFNIGSAE 305

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                 + L  + + +        ++ G+ D+         N  LSL RA +   VL+K 
Sbjct: 306 VSAREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKRAQAVVDVLVKQ 363

Query: 303 -GVSEDRI 309
            G+  DR+
Sbjct: 364 YGIPADRL 371


>gi|85706953|ref|ZP_01038043.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
           217]
 gi|85668564|gb|EAQ23435.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
           217]
          Length = 630

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 16/245 (6%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
              D  + +  ++   +     + +    +   + I  + ++      +  +  D  +  
Sbjct: 382 KDDDALLRQPGSEVRTERFSDGSTRSNVMRADGSEIITIRDATGRVLRRVQVDPDGREYL 441

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
               +   E    +            +  + +   R   LA              + + V
Sbjct: 442 LFDDTRSFEPVEVRNLPKPAYDSFDYQAASDRDALRRALLAADRGDIDRTFSLRQVRETV 501

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270
                   I +          F  +S+   P     L+++G ++        TE+  I G
Sbjct: 502 EVRQMSPEINLQ------NVTFATASAAIQPSQAENLREMGVMMRDLIAEDPTELFLIEG 555

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329
           +TDA         N  LS  RA S      +   V  + +  + G+    LKI +     
Sbjct: 556 YTDAVGAPG---YNLLLSDRRAESVALAFSEYFDVPAENMV-VQGYGESYLKIPTQEAER 611

Query: 330 ANRRI 334
            NRR+
Sbjct: 612 LNRRV 616


>gi|310767498|gb|ADP12448.1| OmpA family protein [Erwinia sp. Ejp617]
          Length = 407

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 210 NIVKGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           ++ + +        + I+  D  N        +F    +   PE   ++ ++   +    
Sbjct: 254 DLRQRLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLK 313

Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
             + I  +TD     +     N   S  +A +   ++++         +  G    +  +
Sbjct: 314 GTLLIAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLL 373

Query: 323 ASDPM--NSANRRIDILV 338
            ++     + NRR++I +
Sbjct: 374 PNNSASNRTQNRRVEITL 391


>gi|171059731|ref|YP_001792080.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170777176|gb|ACB35315.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 534

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 77/292 (26%), Gaps = 30/292 (10%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
                           D +N  + +S    + +         +DL    T+       ++
Sbjct: 235 ITDVPGTSTGTPNTPVDWRNITDSNSITPANPAGTVGTEGGRMDLMTTGTDGAPAGTYID 294

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI--NKEENYFLPPLSKEKILAM 186
           +                    +S++   L   TD+  +   +     F      E +   
Sbjct: 295 SMTANNPRGSAIGPNYVEHFGNSQQFGWLRSDTDVGPAQLWDYPNFSFDTNFDFETVAKG 354

Query: 187 KRKKRLQDLAKKISS-------TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
              + +    +             S            F+            +     FD 
Sbjct: 355 TDNQVVYGALEWGFQIRSGAVVATSEYARAGNDTSATFDEALERFRGYFTHEPIVIYFDT 414

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            S  P+      L  I E L +  +  + I G  D    R   + N+RLS  RA +   +
Sbjct: 415 GSDQPMAGEEAKLDGIQEYLDNYPDATLGIDGFAD---IRGSEQFNFRLSDQRAQTVQAL 471

Query: 299 LMKSGVSEDRISKISGFAHH-------------RLKIASDPMNSA-NRRIDI 336
           ++  G++  RI    G                 +     D      NRR+ I
Sbjct: 472 VLAEGIAAGRIDWAVGVGETQDFSQHGTAPGTAQPV---DAGRLRANRRVVI 520


>gi|116252498|ref|YP_768336.1| OmpA family protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257146|emb|CAK08241.1| putative OmpA family protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 729

 Score = 66.1 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +        +E   I GHTDA       + N 
Sbjct: 608 DLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAV---GSDQSNL 664

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL    G++ + +    G+    LK+ +      NRR+ I
Sbjct: 665 ILSDQRAESVANVLSDVYGIAPENL-ATQGYGESYLKVNTSAPEQENRRVTI 715


>gi|332293116|ref|YP_004431725.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171202|gb|AEE20457.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 429

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 6/113 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I D      F  +S+ P   ++  +  + + +  ++     + G+ D       A  N R
Sbjct: 320 IEDGYVNVYFQFNSTKPETYSLESINYLIKYMTENSGASAQLVGYADEI---GNASSNQR 376

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILV 338
           LS  RA     +++ +G+S DR+  ++G         AS P     RR+   +
Sbjct: 377 LSEKRAQMVKDIMVAAGISADRL-SVTGNGEDASVDKASAPARQLVRRVTFKL 428


>gi|149920362|ref|ZP_01908832.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149818804|gb|EDM78246.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 225

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I+ H D          + R +  +A +    L++ GV+ +RI    G+   R    ++  
Sbjct: 136 IQAHEDTVTADQHRYMSARPTQRQAEAVADFLIQKGVAAERIQA-RGYGEDRPIDTNETK 194

Query: 328 NSA--NRRIDILVEDR 341
                NRR+D++    
Sbjct: 195 EGRRHNRRVDLVFTAP 210


>gi|309783317|ref|ZP_07678027.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
 gi|308917861|gb|EFP63548.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
          Length = 351

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 73/267 (27%), Gaps = 12/267 (4%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
            L   +            +S     ++    +      + +          ++ +     
Sbjct: 83  ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
                   C     +    G          K+  + +   L  L    +  +        
Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLAKLDAHTVATLAIPAEADA 202

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQ 253
           +    +     +     V  V         + +        + F  S +    E    L 
Sbjct: 203 IPAGSAQLTDDVRP---VTVVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAKRSLS 259

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           ++   LA + E + IRG TD++        N  L++ RA +      + GV   ++    
Sbjct: 260 ELLP-LAMTAERVLIRGRTDST---GTVAGNRALAIARAATVRAAFARGGVDPRKLK--V 313

Query: 314 GFAHHRLKIASDPMNSA--NRRIDILV 338
            +       ++D       NRR+++ +
Sbjct: 314 SYCVTCFVASNDTEAGRSANRRVEVEL 340


>gi|294083749|ref|YP_003550506.1| OmpA/MotB domain-containing protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663321|gb|ADE38422.1| OmpA/MotB domain protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 270

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 16/96 (16%)

Query: 260 AHSTEVISIRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMKSG------VSED 307
               E I I GHTD SP R   R       N RLS  RA + Y+ ++          S  
Sbjct: 151 RAFIESIFIEGHTDNSPIRGGLRGNVKINSNLRLSARRATNTYENMIAKKPVLEAFKSPK 210

Query: 308 R--ISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              +  +S +   R    +   +    NRRIDI + 
Sbjct: 211 NEPVFAVSAYGKTRPIDTNSTSSGKANNRRIDIRLL 246


>gi|38146952|gb|AAR11861.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
          Length = 147

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 12/109 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD   +        +L+K+ +     T    +  GHTD          N  L   R
Sbjct: 42  EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANR 332
           A +    +++   S +    +             +S+P       + NR
Sbjct: 99  ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNR 147


>gi|88798991|ref|ZP_01114572.1| flagellar motor protein [Reinekea sp. MED297]
 gi|88778218|gb|EAR09412.1| flagellar motor protein [Reinekea sp. MED297]
          Length = 253

 Score = 65.8 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 80/215 (37%), Gaps = 15/215 (6%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
                +    +S +          + D  +        D+     + E      +     
Sbjct: 41  SSLQNDKFQEVSATLLQIFDVRPSSVDPIELNATPTGPDVFNPFFRPEPLPGTNIDNANS 100

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
               ++  L D+  ++S   + ++ D +          + I I +    N+  F  +S+ 
Sbjct: 101 EVYAQESSLLDIQAQLSDAYAQMIQDRL---FSVSGNESWIEIQL---ANSITFSDNSAD 154

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              +   VL ++ ++L  +   + + G++ AS  R      W LS  RA +  + L ++G
Sbjct: 155 INDQAEAVLYELAKLLQGNALPVRVEGYSGASEVRG-----WELSSSRAVAVVEYLQRAG 209

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           V+ +R+S  + F+ ++     D       RI I+V
Sbjct: 210 VAGERLSSAA-FSSYQPSGEGDLTPG---RIQIVV 240


>gi|260426487|ref|ZP_05780466.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45]
 gi|260420979|gb|EEX14230.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45]
          Length = 695

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 69/222 (31%), Gaps = 12/222 (5%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
            +   +     ++   +   + ++      TR    G+ +    D +       N     
Sbjct: 467 DDGSTRSVVEYDDGNVVETVKAADGRVLRRTRTLPDGQSIVLFDDTQAETEVVVNDLPQT 526

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
               + +  +     +  A   + + + +     +  +        ++  +        F
Sbjct: 527 TETPRRMNFQEVDETELAAALAAESGTSVDRTFSLNQIRNIDAVRHLVPEVSVDSIN--F 584

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  S+   PE    L  +G  +         EV  I GHTDA         N  LS  RA
Sbjct: 585 ETGSAAIRPEEARALAALGNAMKQVIAERPGEVFLIEGHTDAV---GSWTYNLALSDRRA 641

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
            S    L +   V  + +  + G+    L + SD     NRR
Sbjct: 642 ESVALALTEYFDVPPENMV-LQGYGEGDLAVQSDAAERENRR 682


>gi|163800821|ref|ZP_02194721.1| putative outer membrane protein [Vibrio sp. AND4]
 gi|159175170|gb|EDP59967.1| putative outer membrane protein [Vibrio sp. AND4]
          Length = 204

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F   S          + ++ E L       I +RG+         +  N  LS  RA
Sbjct: 81  RILFSNDSDDVDTVYRRQIGELSEFLNEYPSTSIELRGYASKV---GGSEHNLDLSKRRA 137

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343
            +    L+  G+   R+ +I G     L  +   +  ++ NRR+   V   +G
Sbjct: 138 SNVRTALLGYGIDPARV-RIVGLGDTHLEQQGTDEVSHALNRRVTASVIGYKG 189


>gi|298528936|ref|ZP_07016339.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510372|gb|EFI34275.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 223

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A++ +     L    +     L        V      + ++           F   S+ 
Sbjct: 67  QAVQNQSSSLQLQGLYTQAREKLSTPGAPVSVKMTEQGSVLI----SLFGEVFFSPGSAD 122

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK- 301
             PE+   LQ+I E+++ +   + + G TD+        R  + +S  RA    + L + 
Sbjct: 123 LNPESNKYLQQIAEIVSLAQGQVKVAGFTDSRENSVQGDRSIFEISAMRAARIGEELTRS 182

Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
            G+ ++ +  I G    R ++  +    +  NRR++I + D 
Sbjct: 183 RGLRQENLV-IQGHGTPRPQVPENSPVGSEMNRRVEIRIVDS 223


>gi|212213380|ref|YP_002304316.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
 gi|212011790|gb|ACJ19171.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
          Length = 195

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   +          +  ++    I   +     T  FD  S+      +  ++     L
Sbjct: 55  AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A  +   + + G+TD          N  L   R  +  ++L + GV+  +I  +S +   
Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170

Query: 319 RL--KIASDPMNSANRRIDIL 337
           R      ++     NRR++++
Sbjct: 171 RPAVIGNNENAWRLNRRVNLI 191


>gi|240950110|ref|ZP_04754405.1| lipoprotein Plp4/outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           minor NM305]
 gi|240295411|gb|EER46180.1| lipoprotein Plp4/outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Actinobacillus
           minor NM305]
          Length = 164

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   S+   +    L  I + +  +  + +++ G+TD       A  N +LS  R
Sbjct: 54  GDFLFDFDKSVLSAQGKSTLNGIAKEIKEAGAKNVTVTGYTDRL---GSAAYNQKLSQAR 110

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA------NRRIDIL 337
           A +    L   GVS + I  + G        A   +   +       NRR+ I+
Sbjct: 111 AATTKAYLQSQGVSAN-IKAV-GRGAANQVKACKGETGQALKDCLKPNRRVHII 162


>gi|256830739|ref|YP_003159467.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579915|gb|ACU91051.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 295

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 71/184 (38%), Gaps = 8/184 (4%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                KS+++     LP  ++           L  L  ++   ++     ++V       
Sbjct: 91  PKIQYKSVSELSVKALPLGTETIPPQALAGSILDRLHDRLRDLIARDGLQDLVAVQSVPG 150

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
               +++         +F+KS ++   +    L  +GE+L  +   +S+ GH        
Sbjct: 151 KSLHVVL-----AGDLLFEKSRAVLRGDVKETLLAVGEILRSAPHALSVVGHAAPGGAAA 205

Query: 280 IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            +R  W LS+  A      L++ +G+  +R+  ++G+   R  +  D    A  R+++++
Sbjct: 206 GSRGPWELSVAMAADVADFLIRDAGLPAERML-VAGYGDQRPLVDGD-GAGAGWRVELVL 263

Query: 339 EDRQ 342
               
Sbjct: 264 SSEN 267


>gi|313191705|emb|CBW30518.1| putative outer membrane protein A [Bordetella petrii]
          Length = 161

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +LQ++ +          I  GHTD+       + N  LS  RA S
Sbjct: 84  FFDFDKSTLKPEGRQLLQQVAQQAQGINLETIIAVGHTDSI---GTEQYNQGLSERRAAS 140

Query: 295 AYQVLMKSGVSEDRISKISGFA 316
               L+  G+  +RI    G  
Sbjct: 141 VKAYLVSLGIDPNRIYT-EGKG 161


>gi|149198154|ref|ZP_01875201.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
           HTCC2155]
 gi|149138756|gb|EDM27162.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
           HTCC2155]
          Length = 197

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWR 286
           +        F   S+         +Q I E L  +     + G H D          N  
Sbjct: 83  VAHDIEPVYFAFDSAAVRSAEDAKIQAIAEFLTSNPSFTLVIGGHCDER---GSDEYNRT 139

Query: 287 LSLDRAYSAYQVLMKSGVS-EDRISKISGFAHHRL-KIASDPMN-SANRRIDILVEDRQ 342
           LS  RA S  + L+ +    E RI  ++ +   +   + +D  + + NRR +  V D  
Sbjct: 140 LSEKRALSVKESLLSASPDLEMRIETVA-YGEEKPAVVGADSQSYAKNRRAEFEVYDAN 197


>gi|226944962|ref|YP_002800035.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
 gi|226719889|gb|ACO79060.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
          Length = 428

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 13/286 (4%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
           +  T + +     P       A  G FD  +        K  L  D    ++S +L    
Sbjct: 150 EVKTWEKLGGRGGPIRLYARDARSGTFDTFHELVLEPWGK-TLDADARRFESSAELSASV 208

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           +        +       +    +     S     E      +   L + +   E    P 
Sbjct: 209 SRDPAGIGFIGLPYVREAR-ALAISAGESRPMPPEPALVATEDYPLSRRLFLYERPRQPD 267

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                ++   +  R Q+L ++       + A  I            +            F
Sbjct: 268 TWSRALIEFAQSPRGQELVERNGFVAQKVQAVRIAPHADMPPAYQQLARHARRLSVNFRF 327

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            + S++   + +  ++++   L         +++ G  D  P ++  R    LS  RA +
Sbjct: 328 QEGSALLDNKALRDVERVLAYLREHGKLENSLALVGFGD--PKQDPERSTL-LSKLRALA 384

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             + L + G +     +I G         +        NRR+++ V
Sbjct: 385 VRRELARGGAT---FREIIGLGDALPVADNGSEEGRLKNRRVEVWV 427


>gi|225872880|ref|YP_002754337.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
 gi|225792630|gb|ACO32720.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
          Length = 263

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/190 (10%), Positives = 61/190 (32%), Gaps = 6/190 (3%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           + + L + T     +  + +  +  + K     +++ +     A++ + + +      + 
Sbjct: 35  QTQPLVEQTHELNQVTAQNHREIQNVDKRAQSGIQQAQGAAQTAQQSADSANQSAQQAMS 94

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           +        + +       +    F  + ++        L ++   +  +     I   T
Sbjct: 95  QTNALSGVVSNLDNYQPVAQINVTFGFNKAVLSRGDKSKLDQLASQMGSTKGY--IVALT 152

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329
            ++        N +LS  RA +  + L     V   +   + G        ++      +
Sbjct: 153 GSTDSTGTKAYNDQLSQRRAQAVERYLAATYHVPPYKFY-VLGLGKADEVASNRTASGRA 211

Query: 330 ANRRIDILVE 339
            NRR+ + + 
Sbjct: 212 KNRRVQVQLL 221


>gi|260576195|ref|ZP_05844188.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
 gi|259021675|gb|EEW24978.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
          Length = 507

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 11/176 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                  S      + R    Q +       ++ +        +        +++     
Sbjct: 323 ALPEAQASVAAAGYVDRAPERQPMTADGLRLINAIRGAGADVTLDDLKRLADLMVGADRL 382

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288
             T  F+  S+     +   L  +  +LA      + + + G +D       A  N  LS
Sbjct: 383 SLTFRFEDGSTTLDAHSRDNLADLARLLAVGEFRGQDMVLAGFSD---GAGDAAANLALS 439

Query: 289 LDRAYSAYQVLMKS--GVSEDR-ISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RA      L K+   + E + + +I  F                 NRR+++ + 
Sbjct: 440 QARAEGVLAALTKATPDLPEGQALPRIEAFGEALPMACDTTAAGRRLNRRVEVWLR 495


>gi|239979676|ref|ZP_04702200.1| secreted protein [Streptomyces albus J1074]
          Length = 186

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+   PE    +Q I E         + + G TD            +LS +
Sbjct: 63  QAEVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDDL---GSYEHGKKLSKN 119

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA + ++ L+K+ +  +   ++ G++       +        NRR+++
Sbjct: 120 RADAVHEELVKT-LGPNVTYEVRGYSEDYPIADNSTEAGRMKNRRVEV 166


>gi|238022549|ref|ZP_04602975.1| hypothetical protein GCWU000324_02457 [Kingella oralis ATCC 51147]
 gi|237867163|gb|EEP68205.1| hypothetical protein GCWU000324_02457 [Kingella oralis ATCC 51147]
          Length = 471

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++  D   T  F    S        V+  +      + + + + G+TD++     A  N 
Sbjct: 366 VAYKDAVATFYFATGKSDVAAHADKVVADLIAA-GKNGKKLVVSGYTDST---GNAAANA 421

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDI 336
            LS  RA +    L K GV+   I         +    +    + N    RR+++
Sbjct: 422 ELSKKRAQAVKAFLEKQGVNAKNIEL------RKP--ENTTAAAGNNAQGRRVEV 468


>gi|148982298|ref|ZP_01816702.1| Outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145960547|gb|EDK25905.1| Outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 205

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +F  +S+   P  +  ++++   L         ++G+         A  N  LS +RA
Sbjct: 84  HILFANNSTEINPAFLNQIRQMAAFLKRYESTTIELQGYASKV---GNAEHNLMLSKERA 140

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
            +  + L+ +G+   R++ I G        ++D  
Sbjct: 141 ANVRRALISNGIQPSRVN-IVGHGDAE-FSSNDTE 173


>gi|289577893|ref|YP_003476520.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
 gi|289527606|gb|ADD01958.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
          Length = 230

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 25/180 (13%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                 +K ++ DL    +  +  L  +     +          IS  +      FDK  
Sbjct: 40  AAELSLQKAKVDDLIGVRARIIDQLFKEFSNSDMTLSIDPQTGAISFSE---GVFFDKDK 96

Query: 242 SIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
                E    L +         +          I + GHTD +        N  LS  RA
Sbjct: 97  FELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDT---GDYMYNLELSQKRA 153

Query: 293 YSAYQVLMK---SGVSED------RISKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342
           +   + +++    G+              +G ++ +L I +       +RR++     ++
Sbjct: 154 FEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENGKVNRQKSRRVEFKFRLKE 213


>gi|149371838|ref|ZP_01891157.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
 gi|149354978|gb|EDM43539.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
          Length = 647

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 13/119 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             N   FD        +  + LQK+ + +       I +R HTD+    N    N  LS 
Sbjct: 533 DLNMIYFDLDKDFIRADAQIELQKVIKYMKKYPNLKIDVRSHTDSR---NSHAYNEDLSS 589

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340
            R  +    ++   G+S  R+    G+   +L          S+ ++  NRR + ++ +
Sbjct: 590 RRNKNTIAYIVNHGGISAARL-TGRGYGETQLTNHCSDGVQCSEALHQLNRRSEFIIVE 647


>gi|146282539|ref|YP_001172692.1| OmpA family protein [Pseudomonas stutzeri A1501]
 gi|145570744|gb|ABP79850.1| OmpA family protein [Pseudomonas stutzeri A1501]
          Length = 457

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F++ S+    +    L+++ E L  +   T+  ++ G  DA+     A     LS  RA 
Sbjct: 356 FEEGSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAAL---LSKLRAM 412

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           +  + L K GV    + +I+G        ++D       NRR+++ V
Sbjct: 413 TVRRELNKRGVF---LKEINGMGSELPVASNDAGSGRVKNRRVEVWV 456


>gi|157736660|ref|YP_001489343.1| flagellar motor protein MotB [Arcobacter butzleri RM4018]
 gi|157698514|gb|ABV66674.1| flagellar motor component MotB [Arcobacter butzleri RM4018]
          Length = 251

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 1/202 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K            W + YADF+++L+A F+ ++ + + + + +KA+++ F         +
Sbjct: 3   KKKCKCECPAGEKWAVPYADFLSLLLALFIALYALASINVEKQKALKEEFMKIYNFA-AS 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                 E+     ++    +           +  +    N+  +   L         S  
Sbjct: 62  DTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFMSVP 121

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     S   +            L + I+   +     +      +   K R +D     
Sbjct: 122 AHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDALDLS 181

Query: 200 SSTLSGLVADNIVKGVLFETTR 221
           ++  + ++ + +   +      
Sbjct: 182 TARANNVIRELLKYNIPSNRLY 203



 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 19/154 (12%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--------------SII 229
            A    K  ++  K +++  +    +     V   T +  +                + +
Sbjct: 59  AASDTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFM 118

Query: 230 DQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHT-DASPFRNIARDNW 285
                 +F+   +     ++   L+K+ ++++       I   G+  D+   ++  +D  
Sbjct: 119 SVPAHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDAL 178

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            LS  RA +  + L+K  +  +R+   SG+  ++
Sbjct: 179 DLSTARANNVIRELLKYNIPSNRLYS-SGYGSNK 211


>gi|41059077|gb|AAR98873.1| outer membrane protein [Helicobacter pylori]
          Length = 179

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 78  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
             L+  GV +D I  IS F   + K           NRR+D
Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVD 174


>gi|153832073|ref|ZP_01984740.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148871688|gb|EDL70529.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 1563

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 22/162 (13%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           K+ L+     +   +  L  +      +         + + D +   +   F   ++   
Sbjct: 579 KESLKSGELLLKQIIDKLGDNVTFTDSIPNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQ 638

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  L  + + L+     V+ I GH         +  N  LS  RA    +      V
Sbjct: 639 APHLSYLAAVDKELSKIPNAVVEIEGHACQ---NGDSEYNQNLSQQRAQHVAEFFSS--V 693

Query: 305 SEDRISKISGFAHHRLK--IASDP---MNSA---NRRIDILV 338
           S+ R      F   R    + ++     N+    NRR+++ +
Sbjct: 694 SDIRF-----FGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730


>gi|229520255|ref|ZP_04409681.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM
           11079-80]
 gi|167832518|gb|ACA01828.1| hypothetical protein VPI2_0011c [Vibrio cholerae]
 gi|229342621|gb|EEO07613.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM
           11079-80]
          Length = 244

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+++        + L+       + +  +  +   + V+ E      +I I +   T  
Sbjct: 44  ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101

Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           F    S    +  +                 +      + I I GHTD+       + NW
Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNW 161

Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331
            LS DRA S + V         K G  E+    ++  +SG+A  R      ++    S N
Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHESNQQEKSQN 221

Query: 332 RRIDILVEDRQ 342
           RRIDI    ++
Sbjct: 222 RRIDIRFTVKK 232


>gi|126735562|ref|ZP_01751307.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
 gi|126714749|gb|EBA11615.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
          Length = 599

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 77/238 (32%), Gaps = 13/238 (5%)

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
           + +    ++  S +       +         + +    +                 D  +
Sbjct: 360 LRQPGSQVQTESFDDGSTRVIVTRQDGTQIKTIRGSDGRVLQRTRIFADGSEYVLFDDTQ 419

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224
             +  +   LP + ++++     +  +  L   + +T +  +      + +        +
Sbjct: 420 RADPIDMTQLPQVEEDRVQPQTSQGDVDSLRLALMATQNAAIDRTFSLRQIRQVREVRAL 479

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRN 279
              I  + +T  F  +S+   P     L  +   ++        +V  I GHTDA     
Sbjct: 480 APEI--ELDTITFATASAAIQPSQAEELTNLAVAISNIIEDDPRQVFLIEGHTDAV---G 534

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            A  N  LS  RA +    + +   +  + +    G+    LK+++     ANRR  I
Sbjct: 535 DASYNLALSDRRAETVALAMTEYFDIPPENLIT-QGYGESALKVSTPGPERANRRASI 591


>gi|329943865|ref|ZP_08292136.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328531571|gb|EGF58407.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 183

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++        FD  S+        VL +I           +++ GHTD+         N 
Sbjct: 67  TVASLSGDVTFDVDSATLTDRAKQVLDEIVTRWNGKPPATVTVVGHTDSV---ADDAYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336
            LS  RA +    L    V+   +   SG        +        ++   +ANR +D+
Sbjct: 124 TLSERRAKAVADYLTSK-VASLNVQS-SGKGESEPVASETNEDGSVNEAGKAANRHVDV 180


>gi|327480795|gb|AEA84105.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
          Length = 457

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F++ S+    +    L+++ E L  +   T+  ++ G  DA+     A     LS  RA 
Sbjct: 356 FEEGSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAAL---LSKLRAM 412

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
           +  + L K GV    + +I+G        ++D       NRR+++ V
Sbjct: 413 TVRRELNKRGVF---LKEINGMGSELPVASNDAGSGRVKNRRVEVWV 456


>gi|307637795|gb|ADN80245.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
           908]
 gi|325996393|gb|ADZ51798.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
           2018]
 gi|325997981|gb|ADZ50189.1| putative peptidoglycan associated lipoprotein [Helicobacter pylori
           2017]
          Length = 152

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 40  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 96

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 97  ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 150


>gi|29349260|ref|NP_812763.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570394|ref|ZP_04847803.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298384800|ref|ZP_06994359.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|29341168|gb|AAO78957.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840775|gb|EES68857.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298261944|gb|EFI04809.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 394

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 4/134 (2%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            ++ ++    +    ++ +         +  + E     ++        T  F   S   
Sbjct: 244 ELELRQMRDQMNAMAAANMQLQQQLANAQQPVVEEAEEVVVTDANIAPRTVFFKIGSDKL 303

Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
            P+  + L  +   +     +   I G+ D+         N +LSL+RA +   +L+K  
Sbjct: 304 SPQEEMNLSYLASKMKEFPNMTYTINGYADS--ATGTPSINQKLSLERAQAVKDLLVKKY 361

Query: 303 GVSEDRISKISGFA 316
           G+S DR+S  +G  
Sbjct: 362 GISADRLSVAAGGG 375


>gi|291570403|dbj|BAI92675.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 204

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           + ++          ++  + + I  +   N   F+  S+   P+ + ++ KI E L    
Sbjct: 61  AQIIPAAFENIPGIKSVFSTLKIDPVRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYP 120

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +  + I GHTD    R  A  N +L+L+RA +    L K G+   R+  +    + + 
Sbjct: 121 QLSLRIIGHTD---LRGNAARNQQLALNRAIAVRDALTKQGIDPKRLEVV---GNSQP 172


>gi|315635826|ref|ZP_07891088.1| flagellar motor protein MotB [Arcobacter butzleri JV22]
 gi|315479805|gb|EFU70476.1| flagellar motor protein MotB [Arcobacter butzleri JV22]
          Length = 252

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 1/202 (0%)

Query: 20  KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79
           K            W + YADF+++L+A F+ ++ + + + + +KA+++ F         +
Sbjct: 3   KKKCKCECPAGEKWAVPYADFLSLLLALFIALYALASINVEKQKALKEEFMKIYNFA-AS 61

Query: 80  SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                 E+     ++    +           +  +    N+  +   L         S  
Sbjct: 62  DTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFMSVP 121

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +     S   +            L + I+   +     +      +   K R +D     
Sbjct: 122 AHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDALDLS 181

Query: 200 SSTLSGLVADNIVKGVLFETTR 221
           ++  + ++ + +   +      
Sbjct: 182 TARANNVIRELLKYNIPSNRLY 203



 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 19/154 (12%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--------------SII 229
            A    K  ++  K +++  +    +     V   T +  +                + +
Sbjct: 59  AASDTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFM 118

Query: 230 DQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHT-DASPFRNIARDNW 285
                 +F+   +     ++   L+K+ ++++       I   G+  D+   ++  +D  
Sbjct: 119 SVPAHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDAL 178

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            LS  RA +  + L+K  +  +R+   SG+  ++
Sbjct: 179 DLSTARANNVIRELLKYNIPSNRLYS-SGYGSNK 211


>gi|261251271|ref|ZP_05943845.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
 gi|260938144|gb|EEX94132.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
          Length = 188

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249
             ++  ++   +      +  G     +     +   D+    +   +        P   
Sbjct: 41  TQVSGHLTQREAKSENTLLNSGRDVVHSEAADDVCFYDKETQSLVLNYGIDIYKLSPNHK 100

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            VL++    L ++T  I I GH D+         N  LS  RA    + L       +RI
Sbjct: 101 QVLEQYLG-LVNNTAKIYIEGHADSL---GGEGYNKALSARRAKQVAKYLKSDLKQGNRI 156

Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVED 340
            + + +        +  +     NRR+ I ++ 
Sbjct: 157 VEHA-YGESSPICNLEQNSATGCNRRVVITIKS 188


>gi|269963847|ref|ZP_06178160.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831420|gb|EEZ85566.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 1563

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 22/162 (13%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           K+ L+     +   +  L  +      +         + + D +   +   F   ++   
Sbjct: 579 KESLKSGELLLKQIIDKLGDNVTFTDSIPNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQ 638

Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              +  L  + + L+     V+ I GH         +  N  LS  RA    +      V
Sbjct: 639 APHLSYLAAVDKELSKIPNAVVEIEGHACQ---NGDSEYNQNLSQQRAQHVAEFFSS--V 693

Query: 305 SEDRISKISGFAHHRLK--IASDP---MNSA---NRRIDILV 338
           S+ R      F   R    + ++     N+    NRR+++ +
Sbjct: 694 SDIRF-----FGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730


>gi|154173716|ref|YP_001407729.1| flagellar motor protein MotB [Campylobacter curvus 525.92]
 gi|112803650|gb|EAU00994.1| flagellar motor protein [Campylobacter curvus 525.92]
          Length = 242

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 77/221 (34%), Gaps = 5/221 (2%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A + +  KA++  F         
Sbjct: 3   KKCKKQECPAG-EKWAVPYADFLSLLLALFIALYAISAANTEKVKALKTEF--IKIFDYP 59

Query: 79  ASKGIFDEQNPPERSSQNKIDLSID-EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
           ASK   +  +   + S  K D     E +   + + +      K    + E  I      
Sbjct: 60  ASKTTDNIVSQGNKESNAKNDAKSQLEQLKATNAEQEQTIKELKAMLDQSEEQISLDMPD 119

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +     +   D    + +  +  +   + K  +  +   +      ++  +     A 
Sbjct: 120 GVTFKAGETQVTDQNSIEFIKTTAKIANKLPKNISVEIRGYTGGSTSGLESFELGYKRAM 179

Query: 198 KISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMF 237
            ++  L+    D    + V +        +S  D     +F
Sbjct: 180 NVAQILADDGLDTSRMRIVSYGNEPAPKSVSGSDSNRVQIF 220



 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 16/182 (8%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           +   +K  +  +   +KE       K +L+ L             +  +K +     ++ 
Sbjct: 57  DYPASKTTDNIVSQGNKESNAKNDAKSQLEQLKAT------NAEQEQTIKELKAMLDQSE 110

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNI 280
             IS+ D  +   F    +    +  +   K    +A+         IRG+T  S     
Sbjct: 111 EQISL-DMPDGVTFKAGETQVTDQNSIEFIKTTAKIANKLPKNISVEIRGYTGGSTSGLE 169

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           +     L   RA +  Q+L   G+   R+ +I  +  +     S   + +N R+ I  + 
Sbjct: 170 SF---ELGYKRAMNVAQILADDGLDTSRM-RIVSYG-NEPAPKSVSGSDSN-RVQIFFKV 223

Query: 341 RQ 342
            +
Sbjct: 224 DK 225


>gi|42521052|ref|NP_966967.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|99034094|ref|ZP_01314208.1| hypothetical protein Wendoof_01001001 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|42410793|gb|AAS14901.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
           endosymbiont of Drosophila melanogaster]
          Length = 159

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++  I D+R    F    S     +   L  + EVL  + +  +++ GHTD         
Sbjct: 35  VVKQIGDKR--VFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNR---GSHE 89

Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP-------MNSANR 332
            N  L   RA +A + ++  +   E+RI   S          +  D         ++ NR
Sbjct: 90  YNLALGARRADAAKKFMVSCTPYIENRIKTAS-KGETEPLVNVKDDSRNSKYEKEHAKNR 148

Query: 333 RIDI 336
           R++ 
Sbjct: 149 RVEF 152


>gi|254454899|ref|ZP_05068336.1| outer membrane protein, OmpA/MotB family [Octadecabacter
           antarcticus 238]
 gi|198269305|gb|EDY93575.1| outer membrane protein, OmpA/MotB family [Octadecabacter
           antarcticus 238]
          Length = 147

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 10/103 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDR 291
           F   S+   P+    L  +G  +         EV  I G+TDA         N  LS  R
Sbjct: 38  FPSGSAAIQPDQSRELAILGTAIKDLIVERPGEVFLIEGYTDAVGAAG---YNLALSDRR 94

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           A +    L +   V    +    G+    LK+ +     ANRR
Sbjct: 95  AETVALALTQYFDVPPANLVT-QGYGESLLKVQTLEAEQANRR 136


>gi|315127493|ref|YP_004069496.1| hypothetical protein PSM_A2431 [Pseudoalteromonas sp. SM9913]
 gi|315016007|gb|ADT69345.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 241

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 16/171 (9%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           E           ++A K       L           +     + +        + +++  
Sbjct: 69  EQTIAEQQQALTVMAEKTNDYQHVLNHNSHLEAQLELLAQQNEQLTQSQLNNLLAMTVQ- 127

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F   SS   P     L ++  +L    +  + + G  D        + N  LS 
Sbjct: 128 ------FKTGSSDIAPHFAKQLDQLVALLKSQPQLALDLSGFADQR---GEEQANLLLSK 178

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337
            R  +    L+K GVS  R+S    F   +    S+ +   N   RR+ + 
Sbjct: 179 ARVNAVQSYLIKQGVSHTRLSA-QAFGEQQSIANSNTLED-NFFDRRVTLT 227


>gi|256421223|ref|YP_003121876.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256036131|gb|ACU59675.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 778

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 62/237 (26%), Gaps = 15/237 (6%)

Query: 74  KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
               + +       NP +  S                  +           +        
Sbjct: 519 VQTSSKTTEEPVVTNPRQAVSAPIDIPGAAPTSHPAEPVVAKNDPVAAPVKEEPAKEPKS 578

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            +  ++    K          K    +              +   + EK       K ++
Sbjct: 579 AAPVRRGPGSKTPAPVKKPGVKTPAVAVAAPVVTAPVTEEPVVEKTPEKAPEKTPAKPVE 638

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            +A            D +   +  +                  +D +S++   ++  +L 
Sbjct: 639 TVAVAQPEARQEKEMDEMDAAIQHKMEGM-----------EFYYDYNSAVLTTKSRNLLD 687

Query: 254 KIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           ++  VL    +    +R +TD+         N  LS  R Y+  + L++ GV   R+
Sbjct: 688 RVAVVLNQYPDWKLLVRSYTDSR---GSDAYNKDLSALRCYAVIEYLVRKGVPSTRL 741


>gi|153875209|ref|ZP_02003108.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152068328|gb|EDN66893.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 295

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 9/221 (4%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            +  + +  +          + +  DS     L    +        +         +K  
Sbjct: 76  DKRIDRLKIIIEESSIGDEADEVYYDSLDIHALVIEAETFYEQKDYQKALTLFQKAQKRP 135

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--TRTGILISIIDQRNTPMFDKSSS 242
             +  +    L +          A      +L  +      + I  +   N+P F   + 
Sbjct: 136 DGQLMRTYAGLYETYVKLGQKDKATKAFGQLLILSLKENNKLNIKFLFDVNSPEFIDDAG 195

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           +   E +  LQ I +    + +   I GH   +     A  N +LSL RA +  +++   
Sbjct: 196 LIK-EYMAWLQMIAQYFQENNQCFQIAGHCSRT---GTATYNDKLSLSRALTVQKLMQAY 251

Query: 303 GVSEDRISKISGFAHHRLKI---ASDPMNSANRRIDILVED 340
                + + + G       +     D  ++ +RR++ILV +
Sbjct: 252 LPDIMQRTTVVGKGFRENLVGIGTDDARDAIDRRVEILVMN 292


>gi|289678321|ref|ZP_06499211.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
          Length = 62

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343
            LS  RA S    L   GV +  +  + G    +   ++      + NRR+++ ++   G
Sbjct: 1   DLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPIPG 59


>gi|163801699|ref|ZP_02195597.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4]
 gi|159174616|gb|EDP59418.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4]
          Length = 244

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+++        + L+       + +  +  +   + V+ E      +I I +   T  
Sbjct: 44  ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101

Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           F    S    +  +                 +      + + I GHTD+       + NW
Sbjct: 102 FASGKSSIPNDATIQQALKDIGVVLHSAIQKKDRFQYLDTVFIEGHTDSDGIHYRGKGNW 161

Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331
            LS DRA S + V         K G  E+    ++  +SG+A  R      ++    S N
Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLQESNQQEKSQN 221

Query: 332 RRIDILVEDRQ 342
           RRIDI    ++
Sbjct: 222 RRIDIRFTVKK 232


>gi|126725476|ref|ZP_01741318.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126704680|gb|EBA03771.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 216

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVIS 267
           +   ++        +    D      F + S I + E    L  +  +L +S      + 
Sbjct: 85  LAVSLVNPLMPANTISRPADYDYRIHFPQGSDIIVEEFGQHLDMLAGILQYSSLSQTCLK 144

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + GH+D       A+ N+ + + RA +    L           +++              
Sbjct: 145 LVGHSDT---SGSAKANFNMGMLRAKAVKGYLTNRTAFASTRIEVTSEGEDAPLQGISTT 201

Query: 328 NSANRRIDI 336
           +  NRR++I
Sbjct: 202 DPKNRRVEI 210


>gi|138894940|ref|YP_001125393.1| putative periplasmic protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248493|ref|ZP_03147194.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
 gi|134266453|gb|ABO66648.1| Putative periplasmic protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212218|gb|EDY06976.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
          Length = 223

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 28/174 (16%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            +++K+++ +    S  +  L        +  E  +    I       + +F+  S+   
Sbjct: 42  EEKEKKIEQVVSVKSEIIRALTEAFKQSNMTIEIDQQTGAIRF---PGSILFESDSAEIS 98

Query: 246 PETIVVLQKI---------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           PE    LQ+           +   +    I I GHTD          N  LS  RAY+  
Sbjct: 99  PEGKKFLQQFIPKYMGILLQDRFQNEISSIIIEGHTDR---NGTYMYNMSLSQRRAYAVL 155

Query: 297 QVLMKSGVS-------EDRISKISGFAHHRLKIAS----DPMNSANRRIDILVE 339
           + +               +    +G +            DP  S  RR++ L  
Sbjct: 156 EYIYSKEFPNFKERELSKKYITANGRSFSSPLTDENGKYDPDRS--RRVEFLFR 207


>gi|167950653|ref|ZP_02537727.1| OmpA domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 62

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
              N  LS  RA +    L  +GV+ +R+S   GF   +    ++ +     NRR +++
Sbjct: 2   REYNKDLSHRRAITVMHYLSDNGVAAERLSA-EGFGEEQPISDNESLEGQTMNRRAELI 59


>gi|332669857|ref|YP_004452865.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
 gi|332338895|gb|AEE45478.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
          Length = 183

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 13/111 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  +F  +S    P     L  + E +      +++ GHTD+         N  LS  RA
Sbjct: 75  SDVLFAYASHDLDPAAAAALAALVEQVPA-GAQVAVVGHTDSR---GGDAVNLPLSSARA 130

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-------IASDPMNSANRRIDI 336
            +   VL  +    D +  + G                     + NRR+++
Sbjct: 131 EAVAAVLRST--RPDLVLAVGGAGSTEPVADEYVAGAPDLAAMARNRRVEL 179


>gi|118474845|ref|YP_891435.1| flagellar motor protein MotB [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414071|gb|ABK82491.1| flagellar motor protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 238

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ ++ I+A +    +A++           +
Sbjct: 3   KKKKQQECPAG-EKWAVPYADFLSLLLALFIALYAISAVNTAKVEALKTEIIKIFDFPDS 61

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
                  +    E+          +   T 
Sbjct: 62  KGVKQSSKNAKSEKQFDGPGIAMQNSDSTS 91



 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 10/152 (6%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
             +      S +   + K+        +   ST      +N    V  +     + I   
Sbjct: 58  FPDSKGVKQSSKNAKSEKQFDGPGIAMQNSDSTSVKQNTNNERYRVALDQAENQVAI--- 114

Query: 230 DQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286
           D      FD  S+    P+ I  ++ I  ++    E +S+   G+ D            +
Sbjct: 115 DLPAGIKFDPMSAEIYNPDMINFVKIISMIINKVPESVSVEIRGYADDYNEYAKDY---K 171

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L+ DRAY+   +L+ +G+   R+ + + F   
Sbjct: 172 LAADRAYNVLTMLIGNGIDPKRL-RFTSFGDS 202


>gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 665

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 9/105 (8%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F   S          L      +A    + I I G+ D          N  LS  RA 
Sbjct: 565 FLFKFDSDEMEFNEQDKLDAFVATIAGKDIQRIEIDGYADDIGDNG---YNLELSEKRAK 621

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                L+  G    RI  + G+      I  + +   NR++++ +
Sbjct: 622 KIALYLVDKGYPVTRI-ALKGYGE----ITDESLKKLNRKVELKI 661


>gi|330447006|ref|ZP_08310656.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491197|dbj|GAA05153.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 263

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 67/208 (32%), Gaps = 7/208 (3%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                +  +Q EH    L   + +G   C         N         LS     A    
Sbjct: 33  PPPQQAQLRQLEHHSFELQLLAVRGAKHCLPGQYITLENLYRKAREEALSGFVKDAEITL 92

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
            + Q     I   +  L    +     +          +    +   F  + +  LP+  
Sbjct: 93  LKYQTQNAVIQEQMDWLEYHTLCLDPHYSEVELKERFLLYMAVDNQ-FALNKTELLPQYK 151

Query: 250 VVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L    E++       + + G+TD+       + N+ L L RA +  + L++ GV+ ++
Sbjct: 152 ESLIYASEIIKRQEHWHLQLIGYTDSQ---GSTQSNYHLGLARANTVKEFLVEKGVNTNQ 208

Query: 309 ISKISGFAHHRLKIA-SDPMNSANRRID 335
           I  +      +     +     +NR+++
Sbjct: 209 I-SVVSVGESQAIGDYTLTKQLSNRKVE 235


>gi|149923536|ref|ZP_01911937.1| OmpA family protein [Plesiocystis pacifica SIR-1]
 gi|149815605|gb|EDM75136.1| OmpA family protein [Plesiocystis pacifica SIR-1]
          Length = 286

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F   S    P+T   LQ   + +A    ++ +  H D          N  L+  R   
Sbjct: 186 VFFGFDSPKLSPDTQQQLQAAAQCIADQGRLVYLESHADPR---GTEEYNILLTDKRGQG 242

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             + L+  GV  + + ++        +   D   + +RR++ +
Sbjct: 243 VKKFLVDLGVPPENM-QVISKGSLEARGTDDSTYADDRRVEFV 284


>gi|315126010|ref|YP_004068013.1| sodium-type flagellar protein MotY precursor [Pseudoalteromonas sp.
           SM9913]
 gi|315014524|gb|ADT67862.1| putative sodium-type flagellar protein MotY precursor
           [Pseudoalteromonas sp. SM9913]
          Length = 290

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQK---IGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           + +   F         E  +   K       L +    + + GHTD +        N  L
Sbjct: 178 RDHQLQFASGQRTVTAEKDLKFLKDLVHYISLDNRVSKVLVDGHTDNT---GSPLSNRLL 234

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRI 334
           S +RA      L++ G+ +D + ++         I +     S+NRR+
Sbjct: 235 SKERADDVAARLIEFGLPKD-MLEVRAHGQRYPIIKNSKQGASSNRRV 281


>gi|171315861|ref|ZP_02905091.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171098957|gb|EDT43745.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 264

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 17/124 (13%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWR 286
           ++  +F    S      P     L    E +    E+    + GHTD       +  N  
Sbjct: 145 QSDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRI---GPSTVNEP 201

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338
           LS  RA +    L+  G++   I    G    +         S         +RR+ I V
Sbjct: 202 LSRARAQTVRGYLISHGLNGS-IIDAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISV 260

Query: 339 EDRQ 342
             R 
Sbjct: 261 SGRN 264


>gi|288956961|ref|YP_003447302.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
 gi|288909269|dbj|BAI70758.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
          Length = 73

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           + + G TDA         N  LS  RA      L + GV   ++  + G        ++D
Sbjct: 1   MVLIGFTDAQ---GARAANVTLSQQRAQIIADELRRRGV---QVQSVMGLGPDLPVTSND 54

Query: 326 PMNSA--NRRIDILVEDR 341
                  NRR+++ +  R
Sbjct: 55  TEEGRDKNRRVEVWLRQR 72


>gi|269123022|ref|YP_003305599.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
           DSM 12112]
 gi|268314348|gb|ACZ00722.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 491

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 23/284 (8%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             K  +TA   +     P     +  I+  +   +        I    +K     +E  +
Sbjct: 206 INKVGITAGLRLGQLSKPVVEEPKLPIEPEVKPEVKPEPKPEVIEKIVEKIVEVPVEKIV 265

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             +      +  +  +    EK  +      +EK + K     +  + ++ +     K  
Sbjct: 266 EKIVEVPVEKIVEKIVEVPVEKVVEKIVEVPVEKMVEKIVEVPVEKMVEKIVEVPVEKVV 325

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
            + +   +   +           V          I +       +F              
Sbjct: 326 EKMVEVPVEKIVEKEKEVVKEVEVPVHIKPQIKKIELSAD---ALFKFDKYKLEDMLEKG 382

Query: 252 LQKIGEVLAH------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +I E++          + I I GHTD          N  L L RA +    L + GV+
Sbjct: 383 KMEIQELVKKLSTDYVRLDRIDIIGHTDRL---GSDSYNLALGLRRAQTVRSYLQELGVT 439

Query: 306 EDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDILVED 340
                 ++       K+        +        NRR++I +  
Sbjct: 440 TP--ITVASKGKRDPKVKCPGTKATAKLKQCLLPNRRVEINLTG 481


>gi|187931912|ref|YP_001891897.1| outer membrane protein FopA [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712821|gb|ACD31118.1| outer membrane protein FopA [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 392

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/199 (9%), Positives = 55/199 (27%), Gaps = 11/199 (5%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
             + +                 D   +            + + +      +    L   I
Sbjct: 191 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 250

Query: 200 SS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
                +  + ++ V           + + I        F    +    +    +      
Sbjct: 251 KQCEGNFNLTEDGVACYTVNGDDVTVYLDIK-------FAYDKATLNAKGKKAIASFVNF 303

Query: 259 LAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +   +   ++++G+       +     N +LS  RA +    + + G+  ++I    GF 
Sbjct: 304 IKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFG 362

Query: 317 HHRLKIASDPMNSANRRID 335
           ++         +  N+R++
Sbjct: 363 YNDTLSGIHKSDPRNQRVE 381


>gi|258648579|ref|ZP_05736048.1| OmpA family protein [Prevotella tannerae ATCC 51259]
 gi|260851358|gb|EEX71227.1| OmpA family protein [Prevotella tannerae ATCC 51259]
          Length = 691

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 34/144 (23%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
           +I        +    +     + V L ++  +L  +  +   +  + D   +R     N 
Sbjct: 514 NIPVLVRNVFYQFDKAAITDSSKVALDRLAALLKDNPHITIELSSNCD---YRGTDAYND 570

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM----- 327
           RLS  RA +    L+  G+   R++   G+     KI               D +     
Sbjct: 571 RLSQQRAENVVHYLISQGIPAARLTP-KGYGKKNPKIVSKKLAETYTFLKEGDTLTTAYI 629

Query: 328 -----------NSANRRIDILVED 340
                      N+ NRR +  V  
Sbjct: 630 MKLPPKEQEICNALNRRTEFRVLR 653


>gi|209364239|ref|YP_001425325.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
           5J108-111]
 gi|207082172|gb|ABS76935.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
           5J108-111]
          Length = 195

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   +          +  ++    I   +     T  FD  S+      +  ++     L
Sbjct: 55  AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A  +   + + G+TD          N  L   R  +  ++L + GV+  +I  +S +   
Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170

Query: 319 RLKI--ASDPMNSANRRIDIL 337
           R  +   ++     NRR++++
Sbjct: 171 RPAVMGNNENAWRLNRRVNLI 191


>gi|320158393|ref|YP_004190771.1| membrane protein [Vibrio vulnificus MO6-24/O]
 gi|319933705|gb|ADV88568.1| membrane protein [Vibrio vulnificus MO6-24/O]
          Length = 188

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +      IS+ GH D++        N +LS  RA +  + L K     +RI +   F   
Sbjct: 110 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 165

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                   +  N  NRR+ + +E
Sbjct: 166 TPICAAEENQQNGCNRRVVLTLE 188


>gi|296269185|ref|YP_003651817.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
           43833]
 gi|296091972|gb|ADG87924.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
          Length = 193

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 66/186 (35%), Gaps = 17/186 (9%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           ++           +    +       ++DL   +   ++ + + +  +    +  +  + 
Sbjct: 16  AVMAAPASAWADRAAPTPVPEDAVMPVEDLITPVEDVIAEVESLDGTESEEKQGEQITLA 75

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARD 283
           ++        +F    +    +    L++I E +       +I + GHTD          
Sbjct: 76  LT-----ADVLFPLDKATLTAKARQRLREIAEKIKSDGAGGLIRVEGHTDDQ---GSDAY 127

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDI 336
           N  LS  RA +  +VL +     +   +  G+   R K+ +       +   + NRR++I
Sbjct: 128 NLALSRRRAEAVRRVLERELAGMNVTLQAKGYGESRPKVPNFIKGRPVEKNRAKNRRVEI 187

Query: 337 LVEDRQ 342
           +   R+
Sbjct: 188 IFTARR 193


>gi|27366554|ref|NP_762081.1| outer membrane protein [Vibrio vulnificus CMCP6]
 gi|27358120|gb|AAO07071.1|AE016808_91 Outer membrane protein [Vibrio vulnificus CMCP6]
          Length = 188

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +      IS+ GH D++        N +LS  RA +  + L K     +RI +   F   
Sbjct: 110 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 165

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                   +  N  NRR+ + +E
Sbjct: 166 TPICAAEENQQNGCNRRVVLTLE 188


>gi|241205007|ref|YP_002976103.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858897|gb|ACS56564.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 739

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +        +E   I GHTDA       + N 
Sbjct: 618 DLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAV---GSDQSNL 674

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL    G++ + +    G+    LK+ +      NRR+ I
Sbjct: 675 ILSDQRAESVANVLSDVYGIAPENL-ATQGYGESYLKVNTSAPEQENRRVTI 725


>gi|318057618|ref|ZP_07976341.1| secreted protein [Streptomyces sp. SA3_actG]
          Length = 196

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           +   +FDK      P     ++ IGE           + G TD             LS  
Sbjct: 87  QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 143

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA   +  L +  +  +   ++ G++       +        NRR+++
Sbjct: 144 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 190


>gi|315023748|gb|EFT36751.1| Thrombospondin type 3 repeat:OmpA/MotB [Riemerella anatipestifer
           RA-YM]
          Length = 464

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 6/99 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284
            +        F  +S +  P++   L     ++          + G TD       A  N
Sbjct: 355 EVNKNFEGIEFALNSDVIRPQSFGKLDNAANIIKGMNTSKQYLVIGATDTR---GSASYN 411

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
            +LS  RA +  + L+  GVS   +    G     LK  
Sbjct: 412 KKLSQRRADAVVKYLVNKGVSTS-MLVAEGRGQEDLKYP 449


>gi|118602526|ref|YP_903741.1| OmpA/MotB domain-containing protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567465|gb|ABL02270.1| OmpA/MotB domain protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 190

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +    ++   + K    + ++ E  + + GHTD          N  L  +RA S 
Sbjct: 90  FSYDDTEIDEDSTKQIVKHANFMRNNPELNLRLEGHTDER---GTREYNLALGENRALSV 146

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            ++L    +S     K+  F   +  +    + +   NRR++ +
Sbjct: 147 KEILGLYDLSSR--VKVISFGEEKPILQRHDEDVWQKNRRVEFI 188


>gi|154244938|ref|YP_001415896.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
           Py2]
 gi|154159023|gb|ABS66239.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
          Length = 296

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 16/218 (7%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +        + +      + R  +      +S       +++    L    + ++ A   
Sbjct: 43  DFRSKTDVQEDAIEVAREVARKLDAMSGQVRSAIATVDASQQVRRQLLQDIESQLRAEGL 102

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
             ++ +    +  T   +  +     +          I+ +  R  P +           
Sbjct: 103 NVQIDEQNGVLRLTEDAVRFEPSRSDLAGRARSNVDKIARVLDRVLPAYTACHVAEGAAG 162

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK------- 301
               Q        S E + I GHTD++        NW+LS +RA + Y+ ++        
Sbjct: 163 GTACQPGAGP---SLETVFIEGHTDST---GEDGTNWQLSTERAVNTYRAIVAGAPRLRG 216

Query: 302 -SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              +  + I  +SG+A  R    ++     + NRRID+
Sbjct: 217 LRNLRGEEILSVSGYASTRPIDPTESREAWARNRRIDL 254


>gi|330947103|gb|EGH47879.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 156

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                + I GH D          N ++S +RA S   +   SG+  +R+S+  G      
Sbjct: 21  DQKTAVLILGHADT---SGSTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMP 76

Query: 321 KIASDP--MNSANRRIDIL 337
           + A+D     + NRR++IL
Sbjct: 77  RAANDSLQGRALNRRVEIL 95


>gi|209809116|ref|YP_002264654.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
 gi|208010678|emb|CAQ81065.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
           LFI1238]
          Length = 275

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
              + ++   E           ++ A       ++L  ++   L  +      +      
Sbjct: 83  PATVHQAKQNEARIARELEGGLQLDAANDLIIQRNLLARLERQLDYVKRQETCQPPSDSN 142

Query: 220 TRT---GILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274
           +      +   I D  N    F  +S+   P+ +V L +  ++L    +    I GH DA
Sbjct: 143 SGNSDIELAQKIYDLLNKDNQFAFNSAELNPKYVVNLSEASQLLKKHEDFKLLITGHADA 202

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
                    N  L+++RA    + L   G++ +RI  +     +         +    NR
Sbjct: 203 I---GEEDGNQELAIERAKQVKRYLSIFGLALNRIH-VDAVGSNDPYFEGTEPHVRLTNR 258

Query: 333 RIDILVED 340
           R+ I + +
Sbjct: 259 RVTIELLE 266


>gi|297202083|ref|ZP_06919480.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
           29083]
 gi|197714277|gb|EDY58311.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
           29083]
          Length = 210

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 56/193 (29%), Gaps = 18/193 (9%)

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
               ++ G           +    E     P  K    A   + ++ D+ + +       
Sbjct: 26  TPAHADDGDPSYPPGTEPSATAPVEVDPNDPDLKLPEGATLAEPKVLDIKQVVEDQTGDE 85

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEV 265
             ++    V F              +   +F K S+    +    +  I   +   +   
Sbjct: 86  RREDTNADVKFAL------------QAEVLFGKDSAKLNGDARARISAIAAEIKNQNATR 133

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           I + G TD             LS  RA +   VL +         ++ G++      ++ 
Sbjct: 134 IRVFGFTDNL---GSYAHGRTLSRQRANAVQDVLDQELKDSGITYEVRGYSEDFPIASNA 190

Query: 326 PMNSA--NRRIDI 336
                  NRR+++
Sbjct: 191 TEAGRKKNRRVEV 203


>gi|212219430|ref|YP_002306217.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
 gi|215918885|ref|NP_819143.2| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           RSA 493]
 gi|206583770|gb|AAO89657.2| peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 493]
 gi|212013692|gb|ACJ21072.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
          Length = 195

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   +          +  ++    I   +     T  FD  S+      +  ++     L
Sbjct: 55  AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A  +   + + G+TD          N  L   R  +  ++L + GV+  +I  +S +   
Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170

Query: 319 RLKI--ASDPMNSANRRIDIL 337
           R  +   ++     NRR++++
Sbjct: 171 RPAVMGNNENAWRLNRRVNLI 191


>gi|188584474|ref|YP_001927919.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
 gi|179347972|gb|ACB83384.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
          Length = 718

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 11/172 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230
               P +   +   +   ++  + A   + +   +   +    +        +   +   
Sbjct: 531 ELPPPDIRIPRDRYVVDYEQADERAVYEALSAPPVQTLDRRYTLDQVRYSPQLRARMPSV 590

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             NT  FD  S    P+    L  I E +  +      EV  I G+TDA        DN 
Sbjct: 591 DINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNL 647

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL ++  V  + ++   G+    LK+ +   N  NRR+ +
Sbjct: 648 SLSDRRAQSVAAVLTQNFQVPPENLTT-QGYGEQYLKVNTQEANRENRRVTV 698


>gi|254228178|ref|ZP_04921607.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262394011|ref|YP_003285865.1| chemotaxis protein MotB-like protein [Vibrio sp. Ex25]
 gi|151939251|gb|EDN58080.1| Flagellar motor protein [Vibrio sp. Ex25]
 gi|262337605|gb|ACY51400.1| chemotaxis protein MotB-related protein [Vibrio sp. Ex25]
          Length = 244

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+++        + L+       + +  +  +   + V+ E      +I I +   T  
Sbjct: 44  ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101

Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           F    S    +  +                 +      + + I GHTD+       + NW
Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTVFIEGHTDSDSIHYRGKGNW 161

Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331
            LS DRA S + V         K G  E+    ++  +SG+A  R      ++    S N
Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLQESNQQEKSQN 221

Query: 332 RRIDILVEDRQ 342
           RRIDI    ++
Sbjct: 222 RRIDIRFTVKK 232


>gi|227821156|ref|YP_002825126.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
 gi|227340155|gb|ACP24373.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
          Length = 309

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 36/249 (14%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +           Y S   + +  +  +   +E  +   +         K+E   L  L 
Sbjct: 41  SQFNVSDTVPRPLYDSLKDEKDRIQRDIDAIAEIVEANGRPVVTATREMKDELERLRKLL 100

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                A K +     +A    + L+ L ++   +        +    ++       +FD 
Sbjct: 101 NTPEKANKMEVYNSAVADARKNLLTSLKSEINSRIPGVNVAVSANYDALQ-FAGDGLFDS 159

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPF 277
              +P     V +++I EVL  +                           + GHTD+   
Sbjct: 160 GKEVPTTVGAVRMRQIAEVLDQNLGCYSLGSRRAFTENCNPAFALIDSLQVEGHTDSV-- 217

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVS----EDR----ISKISGFAHHRLKIASDPMNS 329
                 N  LS  RA S Y ++++        ++R    +  ++GF   R    ++  + 
Sbjct: 218 -GSEVLNMDLSAKRAASIYALMIEQKPDLVLYQNRDEQPVLSVAGFGKGRPIQQNETESG 276

Query: 330 A--NRRIDI 336
              NRRID+
Sbjct: 277 RDANRRIDL 285


>gi|153207149|ref|ZP_01945928.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           'MSU Goat Q177']
 gi|161831560|ref|YP_001596059.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           RSA 331]
 gi|165918434|ref|ZP_02218520.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           RSA 334]
 gi|120576810|gb|EAX33434.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           'MSU Goat Q177']
 gi|161763427|gb|ABX79069.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           RSA 331]
 gi|165917940|gb|EDR36544.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
           RSA 334]
          Length = 182

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +   +          +  ++    I   +     T  FD  S+      +  ++     L
Sbjct: 42  AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 101

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           A  +   + + G+TD          N  L   R  +  ++L + GV+  +I  +S +   
Sbjct: 102 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 157

Query: 319 RLKI--ASDPMNSANRRIDIL 337
           R  +   ++     NRR++++
Sbjct: 158 RPAVMGNNENAWRLNRRVNLI 178


>gi|331006081|ref|ZP_08329417.1| OmpA/MotB domain containing protein [gamma proteobacterium
           IMCC1989]
 gi|330420118|gb|EGG94448.1| OmpA/MotB domain containing protein [gamma proteobacterium
           IMCC1989]
          Length = 262

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARD 283
           ++        ++   +          L ++ + +      + + I GHTD+     +  D
Sbjct: 96  VNFSQIEKKSLYYNDAEELKSSARRYLNQVADYVKEDPAVKTVYIDGHTDSV---GVRAD 152

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
           N   S +R       L++ GVS D I              +      + NRR+ + +
Sbjct: 153 NLEKSKERTALVVDYLVEKGVSPDMIVA-RWHGERYQVATNQTAKGRATNRRVTLRL 208


>gi|126736504|ref|ZP_01752245.1| OmpA/MotB [Roseobacter sp. CCS2]
 gi|126714042|gb|EBA10912.1| OmpA/MotB [Roseobacter sp. CCS2]
          Length = 526

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 11/188 (5%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
               +  ++   +     L  E     +  +     ++ +    + +   +       + 
Sbjct: 338 PEHAKGMLDFALSEEAQGLISEAGFIDQTIREASVDSQGLRVASAVVANRDFSTFPQLQQ 397

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASP 276
               + IS      T  F+  SS         + ++  +L+            G TD+  
Sbjct: 398 MMEQL-ISSDRLSTTFRFETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSV- 455

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLK--IASDPMNSANR 332
                  N +LS  RA    Q L+     +  +   +  G+          ++     NR
Sbjct: 456 --GDPELNRQLSERRAGQVVQELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINR 513

Query: 333 RIDILVED 340
           R+++ V D
Sbjct: 514 RVEVWVRD 521


>gi|282865311|ref|ZP_06274363.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
 gi|282559784|gb|EFB65334.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
          Length = 213

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 10/185 (5%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            I +      P  S      ++      DL     +TL+     +I   V          
Sbjct: 29  DIPQAVADDSPYPSASAEPPVEVDANDSDLKLPEGATLAPPKVLDIKSVVEDLGGEERRE 88

Query: 226 ISIID----QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280
            +  D     +   +F K S+    +    +  I   + +   + + + G TD       
Sbjct: 89  DTNADIKFALQAEVLFGKDSAKLSSDANSRINAIAAEIKNQDAKKVRVFGFTDNL---GS 145

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           +     LS +RA + + VL  S        +I G+        +        NRR+++  
Sbjct: 146 SEHGDVLSKERAEAVHNVLDASLAGTGITFEIRGYGEQYPIADNSSEEGRKKNRRVEVSF 205

Query: 339 EDRQG 343
           +  +G
Sbjct: 206 QRTEG 210


>gi|159184962|ref|NP_354858.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
 gi|159140240|gb|AAK87643.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
          Length = 746

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +      +  E   I GHTDA         N 
Sbjct: 626 DLDTITFATGSADIPMAQARSLRKVADAINKALQKNPAETFLIEGHTDAV---GSDESNL 682

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS +RA S   VL    G+  + +    G+    LK+ +      NRR+ I
Sbjct: 683 VLSDERAASVANVLTDVYGIPPENL-ATQGYGERYLKVQTLGPEQQNRRVTI 733


>gi|149918137|ref|ZP_01906630.1| OmpA family protein [Plesiocystis pacifica SIR-1]
 gi|149821142|gb|EDM80548.1| OmpA family protein [Plesiocystis pacifica SIR-1]
          Length = 158

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 10/111 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLS 288
           ++  +F   S+    +    L  +               + GHTD          N  L 
Sbjct: 52  KDEALFAYDSAKLSEKAERTLALLARCFDTGPMRYQDLLVTGHTDPR---GSDEYNLDLG 108

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
           L+RA +    L+  GV + RI         R   ++DP     +R+++I +
Sbjct: 109 LERAVAVRDYLVDEGVEDFRIEA-RSVGERR--ASNDPEDWDDDRKVEIQL 156


>gi|118578704|ref|YP_899954.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501414|gb|ABK97896.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
          Length = 201

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   SS      +  L K+ + +      + + GHT           N +LS  RA +  
Sbjct: 104 FRFDSSSLSHADLGGLDKLSKEIFA-GSTVDLTGHTCTI---GTDDYNKKLSFRRAEAVA 159

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
             L   GV+   I  I G        + D     NRR++I+   ++G
Sbjct: 160 TALKARGVN---IGTIEGRGKCCP-ASQD--KRQNRRVEIIGIRKEG 200


>gi|42521994|ref|NP_967374.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
 gi|39574525|emb|CAE78367.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
          Length = 171

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+  SS     +   L +I   L ++        I G TD       A  N RLS  RA 
Sbjct: 68  FNVGSSELNASSRRALNEIASELKNTANSYEKIRISGLTDPQ---GDADRNLRLSEARAT 124

Query: 294 SAYQVLMKSGVSEDRISKISGFAH-HRLKIASDPMNSANRRIDILVED 340
                L+  GV ED++  + G     R  + +    + +RR+D  + +
Sbjct: 125 RVRDYLVSRGVPEDKLETV-GKGAVARDTLGTSSQMARDRRVDFEIVE 171


>gi|86136231|ref|ZP_01054810.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
 gi|85827105|gb|EAQ47301.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
          Length = 367

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 41/243 (16%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           LS   Q      +L     + ++  +          EE   L    K     ++R + + 
Sbjct: 100 LSELDQLRDENEALRARVAELEEENEHLRSRIDQLVEEIERLREEIKRLRDKIERLQVVN 159

Query: 194 DLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPE 247
            L   +S  +     +   +   +L E     ++IS        +   +F   S      
Sbjct: 160 PLEAYLSQAIDQRREILVELRDRLLIEFPELQVVISPEQDALRFQGEGLFRSGSPQLERR 219

Query: 248 TIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARDNW 285
              +++ +G +L                              I GHTD+        DN 
Sbjct: 220 QRAIVETMGRLLDEILVCFTLGERAERGPDCESGNALIEAVQIEGHTDSDR---GRIDNV 276

Query: 286 RLSLDRAYS--------AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335
            LS  RA             +L    + +  +  +SG+   R    ++     +ANRRID
Sbjct: 277 TLSTRRANETFFAIREEVAGILAHRNLRDQPVMSVSGYGEMRPIETNETTEGKAANRRID 336

Query: 336 ILV 338
           + +
Sbjct: 337 LRI 339


>gi|183219680|ref|YP_001837676.1| hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909816|ref|YP_001961371.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167774492|gb|ABZ92793.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167778102|gb|ABZ96400.1| Hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 348

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F K S          +  + E L     +   ++GHT    F     +N  LS +RA   
Sbjct: 242 FIKQSMATEDGAADKIATLAEALKTYPSIKVRVKGHTC---FIGEMDENKILSDERAKFI 298

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           Y  L+K+GV++ ++    GF        +   +    NRR+D  V  
Sbjct: 299 YDELIKNGVNQSQLD-YRGFGETAEIDTNQTESGRIKNRRVDFTVLS 344


>gi|302124486|gb|ADK93849.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
           aeruginosa]
          Length = 151

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  S + + + GHTD          N  L   RA +  
Sbjct: 84  FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 140

Query: 297 QVLMKSGVSE 306
           + L+  GVS 
Sbjct: 141 RYLVLQGVSP 150


>gi|73539667|ref|YP_300034.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
 gi|72123004|gb|AAZ65190.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
          Length = 292

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 65/254 (25%), Gaps = 17/254 (6%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
           +          T  +V     ++   +Q      +   L     ++    +L       +
Sbjct: 37  STTSSHPTNQGTSANVVFPDKASAWPEQGTFPNLDSLRLLQPGMTKDQHYALIGRPHFNE 96

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            +    + +   N       P    +  + +     +   +   +               
Sbjct: 97  GMADVREWDYLFNFRTGKPAPNDVVQCQMKVLFDTAMASRSYYWAPESCAAFLRYPETPA 156

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRG 270
                      +        +F  + S      P     +  +G+ LA       + +  
Sbjct: 157 AMPAIVQTTATTTTTLGADALFTFNGSTAAELVPNGHARIDALGQQLAGMKMLKHVDVYA 216

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----- 325
           +TD          N RLS  RA +   +L+  GV   R+    G                
Sbjct: 217 YTDRL---GTDAYNKRLSQQRADTVKSLLVAQGVD-SRLVTAQGMGKADPLSHCGAMPRP 272

Query: 326 ---PMNSANRRIDI 336
                 + +RR++I
Sbjct: 273 KLITCLAPDRRVEI 286


>gi|297537840|ref|YP_003673609.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
 gi|297257187|gb|ADI29032.1| OmpA/MotB domain protein [Methylotenera sp. 301]
          Length = 261

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 11/105 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   +    +    L    + L   + + ++  G++D          N  LS  RA + 
Sbjct: 166 FDTGKTTLPSDASQTLAATIKWLKAYSSMKAVISGYSDPR---GDLAKNEELSKSRAKAV 222

Query: 296 YQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILVE 339
            ++L  +G+ EDRI         +   + S     A RR+++ +E
Sbjct: 223 REMLEDAGIDEDRIEM------RKPEIVESGGDLGAARRVEVSIE 261


>gi|104782093|ref|YP_608591.1| periplamic phosphate-binding protein [Pseudomonas entomophila L48]
 gi|95111080|emb|CAK15800.1| putative periplamic phosphate-binding protein [Pseudomonas
           entomophila L48]
          Length = 435

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 76/262 (29%), Gaps = 14/262 (5%)

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
           D     E      +D    E   +        +   +    R       L+    ++   
Sbjct: 179 DRSGTFETFKARVLDPQHGELSPQARRFESADALAGQVLADRQAIGFSGLATVHGAKVLA 238

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-- 202
            +          L      +  +++   ++LP  +K    A+    +       ++    
Sbjct: 239 VAEGDAPALPPSLALVASEDYPVSRRLFFYLPGNAKPLARALAEFAQSPAGQAIVAEQGF 298

Query: 203 -LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA- 260
               + A  +            +            F + S+    + +  +Q++G+ L  
Sbjct: 299 VAQQIKALPVTVQPGMPPRYRALASEARRLTVNFRFQEGSASLDNKALRDVQRVGDYLRH 358

Query: 261 --HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                E   + G  D       A     LS  RA +  + L ++GV    +  ++G    
Sbjct: 359 AGKLHEQAVLVGFGDPKETPGRAAL---LSRLRAMAVRRELARAGVE---VKDVAGMGDE 412

Query: 319 RLKIASDPMNS--ANRRIDILV 338
                +D       NRR+++ V
Sbjct: 413 LPVAGNDLEQGRLRNRRVEVWV 434


>gi|323705966|ref|ZP_08117537.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534764|gb|EGB24544.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 230

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 25/175 (14%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            +K ++ ++    +  ++ L+ +     +          IS  +      FDK       
Sbjct: 45  AQKAKVDEIIGVRARIINQLLNEFKNSDLSLSIDPQTGAISFSE---GIFFDKDKFELKD 101

Query: 247 ETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           E    L +         +          I + GHTD +        N  LS  RA+   +
Sbjct: 102 EGKRYLNEFFPRYISILMDPKFKKYISQIIVEGHTDDT---GDYVYNLELSQKRAFEVVR 158

Query: 298 VLMK---SGVSEDR------ISKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342
            +++    G+              +G ++ +L I +       +RR++     ++
Sbjct: 159 YILQSDIKGIDSKVKSDLMPYITANGRSYSQLIIENGKVNREKSRRVEFKFRLKE 213


>gi|109896581|ref|YP_659836.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109698862|gb|ABG38782.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 368

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292
             +F  +S+         ++     +       ++  G+  A      +  N  LS +RA
Sbjct: 254 RILFANNSAEIANRANSDIRDFAAFMKRFPSTDTVIEGYASA---PGESDYNQWLSEERA 310

Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342
            +   VL++   +   RI+ + GF   +L  A     +   NRRI   V   +
Sbjct: 311 KAVRMVLIEDYDIKPARITAV-GFGESKLLDAPTAKEANKINRRIVARVSASK 362


>gi|89076000|ref|ZP_01162369.1| probable peptidoglycan-associated lipoprotein precursor
           [Photobacterium sp. SKA34]
 gi|89048291|gb|EAR53871.1| probable peptidoglycan-associated lipoprotein precursor
           [Photobacterium sp. SKA34]
          Length = 174

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   +S         ++  G          +I          FD             L  
Sbjct: 16  LQGCVSDRAIYADYGDLACGTTVIEAPAPAIIPSDQWPVAVYFDFDKHDLQMSEQSQLDL 75

Query: 255 IGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
             ++L+ +      + G  D+      A+ N +L+L RA          G+   R+  +S
Sbjct: 76  ASKILSDNPRYRVAVIGSADSM---GGAKYNDKLALKRAKVVADYFFSKGIDRSRMVTLS 132

Query: 314 GFAHHRLKIASDPMNSA-NRRIDILVEDRQ 342
             +  +  ++ D   +  NRR  +++    
Sbjct: 133 SGSREQFIVSKDREVNRVNRRAQLILLGAN 162


>gi|261885573|ref|ZP_06009612.1| Omp18 [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 72

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + G+ D          N+ L + RA +A   L+  GVS DRI +I+     +       
Sbjct: 1   MVEGNCDEW---GSDEYNYALGVKRAKTAKDALVAQGVSADRI-EITSNGESKPVCTERT 56

Query: 327 MN--SANRRIDILVE 339
               + NRR +  + 
Sbjct: 57  KACDAQNRRDEFKIL 71


>gi|257125830|ref|YP_003163944.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Leptotrichia buccalis
           C-1013-b]
 gi|257049769|gb|ACV38953.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Leptotrichia buccalis
           C-1013-b]
          Length = 254

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
           EK ++  K+ D +   N    Y     S+    A +  +       +I+     +V    
Sbjct: 41  EKLEEKIKNGDKKAINNLGNLYAKDENSRNIPKAKEYYRLAIKNGSEIARKNLEIVNKLP 100

Query: 212 VKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHST-- 263
                         I  +++    +      F              +++  E + +    
Sbjct: 101 KLCPERSICENWTTIRFVEKDGKIVKMIIRGFPIDKEEVNKTEKQAIKEEIEYMLNVFFE 160

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLK 321
            E   I G+ D +          +LSL RA    + L ++G+ +D +I+K+ G       
Sbjct: 161 NEEFEIVGYADKTENNKN-----KLSLLRAEKMSEFLKQNGLRKDIKITKMIGKGSENPI 215

Query: 322 IASDPMNSA--NRRIDILVEDRQ 342
             +D +     NRR++IL+++ +
Sbjct: 216 DTNDTVEGRYNNRRVEILLKNGK 238


>gi|109947175|ref|YP_664403.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
           acinonychis str. Sheeba]
 gi|109714396|emb|CAJ99404.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
           acinonychis str. Sheeba]
          Length = 181

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 69  IESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            L + R  S    L+  GV +D I  IS F   + K           NRR+D+ +
Sbjct: 126 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGEIKPKCIQKTKECYKENRRVDVKL 179


>gi|152979448|ref|YP_001345077.1| peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
           130Z]
 gi|150841171|gb|ABR75142.1| Peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
           130Z]
          Length = 152

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 9/109 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E   +L      L  +    + + G+ D          N  
Sbjct: 45  LQQRYNTVYFAFDRYDIEGEYQQLLDAHAAYLTATPAAKVLVEGNADER---GTPEYNIA 101

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           L   RA +    L   G   + IS +S +   +  +        + NRR
Sbjct: 102 LGQRRADAVKNYLSAKG--ANNISTVS-YGEEKPAVLGHDEAAYAKNRR 147


>gi|241668774|ref|ZP_04756352.1| outer membrane associated protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 390

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F   S+    +    +      + +S  + ++++G+       +     N +LS  RA +
Sbjct: 280 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGTTGSEFEIYNQKLSERRAEA 339

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
               + + G+  DRI    GF +          ++ N+R+
Sbjct: 340 VADYMKQLGLDNDRIIT-KGFGYENTLDGIHKSDARNQRV 378


>gi|167765428|ref|ZP_02437541.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC
           43183]
 gi|167697056|gb|EDS13635.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC
           43183]
          Length = 396

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 5/250 (2%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            K    Y N  G  +   +                 +   +  + TK        +    
Sbjct: 124 YKQRFDYMNFHGDVMFNLNALFGGYNEDRVYEIIPYLGAGLTHNYTKPHRQALALNAGII 183

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            +++        L  S      K   T   +    +  +T        +  +  P     
Sbjct: 184 NRFRISNAIDINLELSAMGAEDKFDGTVAGKGYDGVFSATLGLTYHFPKRGFNRPTPQLI 243

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             L +   ++        +  L   +     K +    T   ++        T  F   S
Sbjct: 244 SALELSAMQQQIAEMAAANQQLESALTAAQNKPMEVAETEV-VVTDPNIAPRTVFFKIGS 302

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +   P  ++ +  + + +         + G+ D+         N  LSL RA +   VL+
Sbjct: 303 AEVSPREVMNISYLAKQMQEFPNTTYTVNGYADS--ATGTPEFNKELSLKRAQAVVDVLV 360

Query: 301 K-SGVSEDRI 309
           K  G+  +R+
Sbjct: 361 KDYGIPANRL 370


>gi|57505391|ref|ZP_00371319.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis
           RM3195]
 gi|57016216|gb|EAL53002.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis
           RM3195]
          Length = 244

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 2/184 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F     +  T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISETNPAKVEALKTEFVKIF-DYTT 60

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                 + QN  + +  ++      E + + ++  +      K    + EN I     S+
Sbjct: 61  TQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQETIKKLKAALDQSENQIALNLPSR 120

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                 ++    ++    L +   L  S+  +    +   +     A++  +   + AK 
Sbjct: 121 VEFAKNSAEIVSADMQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSFELGYERAKA 180

Query: 199 ISST 202
           + + 
Sbjct: 181 VMNY 184



 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           ++   K     T+  K  +      +   S+         +   D  + +          
Sbjct: 39  ETNPAKVEALKTEFVKIFDYTTTQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQET 98

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVI 266
                   + +   I +++  +     F K+S+  +   +    K    L+        I
Sbjct: 99  IKKLKAALDQSENQIALNLPSRVE---FAKNSAEIVSADMQDYLKRMAQLSLSLPPQAKI 155

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            IRG TD S     +     L  +RA +     +  GVS +++  I  +  +   +    
Sbjct: 156 EIRGFTDNSDSALRSF---ELGYERAKAVMNYFIDGGVSVEKL-SIKSYGFNEPLLNHAS 211

Query: 327 MNSANRRIDIL 337
            + AN R++I 
Sbjct: 212 SDLANNRVEIY 222


>gi|331014336|gb|EGH94392.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 447

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F +SS+    +    L+++ E L       + +++ G  DA      A     LS  RA 
Sbjct: 346 FAQSSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +  + L+KSGV+      I G         +D  +    NRR+++ V+
Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447


>gi|315638943|ref|ZP_07894114.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21]
 gi|315480972|gb|EFU71605.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21]
          Length = 244

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 2/184 (1%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F     +  T
Sbjct: 3   KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISETNPAKVEALKTEFVKIF-DYTT 60

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138
                 + QN  + +  ++      E + + ++  +      K    + EN I     S+
Sbjct: 61  TQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQETIRKLKAALDQSENQIALNLPSR 120

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                 ++    ++    L +   L  S+  +    +   +     A++  +   + AK 
Sbjct: 121 VEFAKNSAEIVSADVQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSFELGYERAKA 180

Query: 199 ISST 202
           + + 
Sbjct: 181 VMNY 184



 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F K+S+  +   +    K    L+        I IRG TD S     +     L  +RA 
Sbjct: 123 FAKNSAEIVSADVQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSF---ELGYERAK 179

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +     +  GVS  ++  I  +  +   +   P + AN R++I 
Sbjct: 180 AVMNYFIDGGVSVGKL-SIKSYGFNEPLLNHAPSDLANNRVEIY 222


>gi|330446492|ref|ZP_08310144.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490683|dbj|GAA04641.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 279

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 8/155 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +++ + L   +S+        +  + +          I+         +D++S    
Sbjct: 125 QDWQRQNRTLEVGLSAVSFQKGYQDFSQCLNKLLPYGFEDIAFSVLH----YDENSDTLN 180

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             +   L KI + + +S +V  +   +              +S  RA +  +     G+ 
Sbjct: 181 KISQQRLAKIADFVRYSDDVDLVLVASFNDSLAGTTES-QDMSEHRAENLRKYFKSLGLP 239

Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           EDR+ +I  +   R    +      S NRR+ I +
Sbjct: 240 EDRV-QIEAYGKRRPIADNSTPIGRSLNRRVVISL 273


>gi|260363440|ref|ZP_05776286.1| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|308113738|gb|EFO51278.1| outer membrane protein [Vibrio parahaemolyticus K5030]
          Length = 166

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 5/151 (3%)

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
           ++               ++   LQD           L         +        + +  
Sbjct: 17  QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288
             +   +F   S    P     ++++ + L       I ++G+   +     ++ N  LS
Sbjct: 77  KMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             RA +    L+  G+  +R+ +I GF    
Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTH 163


>gi|15641766|ref|NP_231398.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121585850|ref|ZP_01675644.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80]
 gi|121727708|ref|ZP_01680803.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52]
 gi|147673520|ref|YP_001217304.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395]
 gi|153819630|ref|ZP_01972297.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457]
 gi|153821127|ref|ZP_01973794.1| hypothetical protein A5E_2064 [Vibrio cholerae B33]
 gi|227081908|ref|YP_002810459.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2]
 gi|229508134|ref|ZP_04397639.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286]
 gi|229511627|ref|ZP_04401106.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33]
 gi|229518766|ref|ZP_04408209.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9]
 gi|229607695|ref|YP_002878343.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236]
 gi|255744822|ref|ZP_05418772.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101]
 gi|262161895|ref|ZP_06030913.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE
           91/1]
 gi|262169763|ref|ZP_06037454.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27]
 gi|298498167|ref|ZP_07007974.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656285|gb|AAF94912.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121549988|gb|EAX60006.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80]
 gi|121630005|gb|EAX62413.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52]
 gi|126509834|gb|EAZ72428.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457]
 gi|126521323|gb|EAZ78546.1| hypothetical protein A5E_2064 [Vibrio cholerae B33]
 gi|146315403|gb|ABQ19942.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395]
 gi|227009796|gb|ACP06008.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2]
 gi|227013663|gb|ACP09873.1| chemotaxis protein MotB-related protein [Vibrio cholerae O395]
 gi|229343455|gb|EEO08430.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9]
 gi|229351592|gb|EEO16533.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33]
 gi|229355639|gb|EEO20560.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286]
 gi|229370350|gb|ACQ60773.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236]
 gi|255737293|gb|EET92688.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101]
 gi|262021997|gb|EEY40707.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27]
 gi|262028627|gb|EEY47282.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE
           91/1]
 gi|297542500|gb|EFH78550.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 244

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 67/191 (35%), Gaps = 27/191 (14%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L+++        + L+       + +  +  +   + V+ E      +I I +   T  
Sbjct: 44  ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101

Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           F    S    +  +                 +      + I I GHTD+       + NW
Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNW 161

Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331
            LS DRA S + V         K G  E+    ++  +SG+A  R      A+    S N
Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQN 221

Query: 332 RRIDILVEDRQ 342
           RRIDI    ++
Sbjct: 222 RRIDIRFTVKK 232


>gi|77359582|ref|YP_339157.1| outer membrane protein [Pseudoalteromonas haloplanktis TAC125]
 gi|76874493|emb|CAI85714.1| conserved protein of unknown function ; putative outer membrane
           protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 244

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 10/165 (6%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPM 236
              +     +    + +        LS          VL           I +    T  
Sbjct: 71  ADNKIAQQQRAIIVMTEKTNDYQHLLSHNSQLEQQIEVLANQNEQLTQSQINNLLAMTVQ 130

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S +  P   + L ++  +L +  +  + + G  D        + N  LS  R  + 
Sbjct: 131 FKTGSRVIAPHFALQLDQLVTLLKNQPQLALDLSGFADQR---GDEQANLLLSKARVNAV 187

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337
              L+K GVS  R+S    F   +    ++ +   N   RR+ + 
Sbjct: 188 QSYLIKQGVSHTRLST-QAFGEQQTLAKTNTVED-NTFDRRVTLT 230


>gi|126730914|ref|ZP_01746723.1| OmpA family protein [Sagittula stellata E-37]
 gi|126708630|gb|EBA07687.1| OmpA family protein [Sagittula stellata E-37]
          Length = 198

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 10/104 (9%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F   S          +       +       I GHTD+         N +LS      A
Sbjct: 100 FFATDSYKISKHGQAQIANFFRSSSAVG--FVIAGHTDSR---ASDAYNMKLSY---NRA 151

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
             V   +      I+ + G+       ++      + NRR++IL
Sbjct: 152 LAVARVARAVGANITDVRGYGERMPVASNATAAGMAKNRRVEIL 195


>gi|325293279|ref|YP_004279143.1| outer membrane protein, OmpA family protein [Agrobacterium sp.
           H13-3]
 gi|325061132|gb|ADY64823.1| putative outer membrane protein, OmpA family protein [Agrobacterium
           sp. H13-3]
          Length = 771

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +         E   I GHTDA         N 
Sbjct: 651 DLDTITFATGSADIPMAQARSLRKVADAINKALAKNPAETFLIEGHTDAV---GSDESNL 707

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS +RA S   VL    G+  + +    G+    LK+ +      NRR+ I
Sbjct: 708 VLSDERAASVANVLTDVYGIPPENL-ATQGYGERYLKVQTLGPEQQNRRVTI 758


>gi|302521646|ref|ZP_07273988.1| secreted protein [Streptomyces sp. SPB78]
 gi|302430541|gb|EFL02357.1| secreted protein [Streptomyces sp. SPB78]
          Length = 205

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           +   +FDK      P     ++ IGE           + G TD             LS  
Sbjct: 96  QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 152

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA   +  L +  +  +   ++ G++       +        NRR+++
Sbjct: 153 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 199


>gi|319782061|ref|YP_004141537.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167949|gb|ADV11487.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 743

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             +     +D     +      L    +E IL  +  +   D  + +           + 
Sbjct: 545 DERHYEDDSDWRDPGDDLPPMRLTIPRREYILDSEDVESPDDYYEFLEQP-PVEKVQRLY 603

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVIS 267
                + +     I+     +T  F+  S+      +  L+ +   +      +  E   
Sbjct: 604 SIDEVKRSARVRDIARRVDLDTLNFEFGSASISDTEVQKLEGVATAMEKLLKKNPAETFL 663

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326
           I GHTDA         N  LS  RA +  + L  + G+  + ++   G+    LK+ +  
Sbjct: 664 IEGHTDAV---GTPEANLALSDRRAEAVAEALTNAFGIPPENLTT-QGYGEEYLKVNTAA 719

Query: 327 MNSANRRIDI 336
            N  NRR+ I
Sbjct: 720 PNRENRRVAI 729


>gi|254877305|ref|ZP_05250015.1| outer membrane associated protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843326|gb|EET21740.1| outer membrane associated protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 391

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F   S+    +    +      + +S  + ++++G+       +     N +LS  RA +
Sbjct: 281 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGTTGSEFEIYNQKLSERRAEA 340

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
               + + G+  DRI    GF +          ++ N+R+
Sbjct: 341 VADYMKQLGLDNDRIIT-KGFGYENTLDGIHKSDARNQRV 379


>gi|13472197|ref|NP_103764.1| hypothetical protein mlr2412 [Mesorhizobium loti MAFF303099]
 gi|14022942|dbj|BAB49550.1| mlr2412 [Mesorhizobium loti MAFF303099]
          Length = 754

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 11/185 (5%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
               D     +      L    ++ IL  +  +   D    +       V   +      
Sbjct: 561 QDEGDWRDPGDDLPPMRLTIPRRDYILDSEDVQSPDDYYTFLDQPPVERV-QRLYSIDEV 619

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHT 272
           + +     I+     +T  F+  SS      +  L+ +   +      +  E   I GHT
Sbjct: 620 KRSARVRDIARRVDLDTLNFEFGSSSISDTEVQKLEGVASAMEKLLKKNPAETFLIEGHT 679

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331
           DA         N  LS  RA +  + L  + G+  + ++   G+    LK+ +   N  N
Sbjct: 680 DAV---GTPEANLALSDRRAEAVAEALTNAFGIPPENLTT-QGYGEQYLKVNTQAPNREN 735

Query: 332 RRIDI 336
           RR+ I
Sbjct: 736 RRVAI 740


>gi|90419554|ref|ZP_01227464.1| conserved hypothetical protein, OmpA family [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336491|gb|EAS50232.1| conserved hypothetical protein, OmpA family [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 388

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDR 291
           F+  S+    E +  L+ + + +A        E   I GHTDA       R N  LS  R
Sbjct: 272 FNFGSAEITQEEVGDLRALADAIARVIAENPDETFLIEGHTDAV---GSERANLALSDRR 328

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           A      L +   V  + +    G+    LK+ +   N  NRR+ +
Sbjct: 329 ADGVATALTQYFDVPPENLVT-QGYGEQDLKVDTQAENRENRRVTV 373


>gi|284046858|ref|YP_003397198.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
 gi|283951079|gb|ADB53823.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
          Length = 615

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 72/253 (28%), Gaps = 10/253 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           +P        +             D       + ++                        
Sbjct: 360 SPSVSPLAGAVRRPPSADPPPAQRDDAACEPPRIERSVPSRPLPGRRVMLTGRGFGARPD 419

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
             + +       S      I  +    LP      +       R   L  +++ T +  V
Sbjct: 420 RVEVDGRAVRSVSYWTPTRIVFQLPGDLPDGGTVVVRRGTAASRGYPLNPRMTGTGAAAV 479

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVI 266
            D     V+          S +D  +  +F   S    P  I +++ + E  L      +
Sbjct: 480 PDE-RDAVMDGAVCDARAGSTVDLDSGALFAYDSVQLRPGAIELVEGLCERRLLEGAATL 538

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + G+TDA+     A  N  LS  +A     VL+   V+  R   + G    R +     
Sbjct: 539 LVVGYTDAT---GPAAYNRVLSRRQAARVRDVLLGEAVTRPRTVVVRGLGEARPR----T 591

Query: 327 MNSANRRIDILVE 339
             + N RI I+V 
Sbjct: 592 DGADN-RIRIVVR 603


>gi|89256632|ref|YP_513994.1| outer membrane associated protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|167011028|ref|ZP_02275959.1| outer membrane associated protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|89144463|emb|CAJ79767.1| outer membrane associated protein [Francisella tularensis subsp.
           holarctica LVS]
          Length = 392

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 55/198 (27%), Gaps = 9/198 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
             + +                 D   +            + + +      +    L   I
Sbjct: 191 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 250

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                    +    GV   T     +   +D +    F    +    +    +      +
Sbjct: 251 KQ--CEGNFNLTEDGVACYTVNGDEVTVYLDTK----FAYDKATLNAKGKKAIASFVNFI 304

Query: 260 AH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
              +   ++++G+       +     N +LS  RA +    + + G+  ++I    GF +
Sbjct: 305 KDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFGY 363

Query: 318 HRLKIASDPMNSANRRID 335
           +         +  N+R++
Sbjct: 364 NDTLGGIHKSDPRNQRVE 381


>gi|37676263|ref|NP_936659.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|37200804|dbj|BAC96629.1| outer membrane protein [Vibrio vulnificus YJ016]
          Length = 198

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +      IS+ GH D++        N +LS  RA +  + L K     +RI +   F   
Sbjct: 120 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 175

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                   +  N  NRR+ + +E
Sbjct: 176 TPICAAEENQQNGCNRRVVLTLE 198


>gi|58698495|ref|ZP_00373400.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630914|ref|YP_002727705.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
 gi|58534989|gb|EAL59083.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592895|gb|ACN95914.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
          Length = 159

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F    S     +   L  + EVL  + +  +++ GHTD          N  L   
Sbjct: 41  NKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNR---GSHEYNLALGAR 97

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP-------MNSANRRIDI 336
           RA +A + ++  +   E+RI   S          +  D         ++ NRR++ 
Sbjct: 98  RADAAKKFMVSCTPYIENRIKTAS-KGETEPLVNVKDDSRNSKYEKEHAKNRRVEF 152


>gi|253997443|ref|YP_003049507.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
 gi|253984122|gb|ACT48980.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
          Length = 191

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            +    FD  S     E   +++   + L  ++    + +G+TD          N  L  
Sbjct: 82  SKRNIYFDFDSDSVKAEYRPIVEAHAKYLLANSNAKVVLQGNTDER---GTREYNVSLGQ 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
            RA S  +     GV + +I  +S     +     A +  +  NRR++++ E+ 
Sbjct: 139 RRAVSVKKSFNLLGVQDKQIETVS-LGEEKASANCADEACHQQNRRVEVVYEND 191


>gi|300776671|ref|ZP_07086529.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
 gi|300502181|gb|EFK33321.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
          Length = 886

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 15/116 (12%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + T  +   S++   +   VL  + + L    +  +++ G+            N  LS  
Sbjct: 318 QRTIYYKFDSTVIDKDGEAVLNNVLKFLLEHKDSTMNLSGYAC---VIGKENYNKGLSQK 374

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----------SDPMNSANRRIDI 336
           RA    +     G+   RI  + G                   ++     NRR+DI
Sbjct: 375 RADVVKKFFADGGLDPRRIISV-GKGEVDPTDDKMGRDNIKYKNEKDYENNRRVDI 429


>gi|17230523|ref|NP_487071.1| hypothetical protein all3031 [Nostoc sp. PCC 7120]
 gi|17132125|dbj|BAB74730.1| all3031 [Nostoc sp. PCC 7120]
          Length = 599

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 18/145 (12%)

Query: 210 NIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-------- 260
                 L E+    + I     +R    F + S   +P  +  L  +   +         
Sbjct: 454 QFQDQDLVESELNELAIYQSQIEREIIFFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKY 513

Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 I I GHT+ +        N +LS  R+      L   G+S  ++ ++ G +  +
Sbjct: 514 LEKDVHIQIIGHTNTT---GTESRNAQLSAGRSQRVLSYLSSQGISTSQL-QVLGVSSSQ 569

Query: 320 LKIASDPMNSA--NRRID--ILVED 340
                        NRR+   +++  
Sbjct: 570 PLQPELTDEGKKFNRRVSFKVIIMR 594


>gi|323528823|ref|YP_004230975.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323385825|gb|ADX57915.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 242

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 17/124 (13%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWR 286
            +  +F    S P    P     L +I   +     V   ++ GHTD          N  
Sbjct: 123 ESDALFPFGKSSPESMLPAAKARLDEIAARIRQHEHVSAVTVVGHTDRL---GPESINGP 179

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338
           LSL RA +    L+  G+    I    G      +      ++         +R + I V
Sbjct: 180 LSLARANTVRDYLVAHGLDGS-IIHAKGVGSSEPRTHCAEGDARALIACLQQDRYVSITV 238

Query: 339 EDRQ 342
           E R+
Sbjct: 239 EGRK 242


>gi|194295640|gb|ACF40847.1| outer membrane protein [Riemerella anatipestifer]
          Length = 270

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 62/248 (25%), Gaps = 21/248 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             N   AS  +       ++     +D            + +             ++N  
Sbjct: 42  LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 101

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            ++   ++  C    T             D+          +                  
Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D    +           + +       +    +          F+ + +   PE+   L
Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205

Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  EV+   +     + GH D    +  A  N +LS +RA S    L   GV+  ++  
Sbjct: 206 DQAAEVIKSSNGGTFLVVGHAD---VKGNANYNLKLSRERAASVVVALEARGVNPSQLKS 262

Query: 312 ISGFAHHR 319
             G     
Sbjct: 263 -KGVGSAE 269


>gi|90413203|ref|ZP_01221198.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
 gi|90325755|gb|EAS42213.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
          Length = 168

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   SI  PE I  L      + +    I I GHTD   ++     N +LS  R+    
Sbjct: 65  FDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTD---YQGSDDYNEKLSFRRSTVIQ 121

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
           Q L      E+   +++ F  +   + +     N+ NRR
Sbjct: 122 QYLSARISVENYTFEVAYFGENNPIVKAHSLKANALNRR 160


>gi|254564113|ref|YP_003071208.1| hypothetical protein METDI5803 [Methylobacterium extorquens DM4]
 gi|254271391|emb|CAX27404.1| Conserved hypothetical protein; putative OmpA family member
           [Methylobacterium extorquens DM4]
          Length = 717

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              + +     +           +                   P +   +   +   ++ 
Sbjct: 491 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 550

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251
            + A   + +   +   +    +        +   +     NT  FD  S    P+    
Sbjct: 551 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 610

Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
           L  I E +  +      EV  I G+TDA        DN  LS  RA S   VL ++  V 
Sbjct: 611 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 667

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + ++   G+    LK+ +   N  NRR+ +
Sbjct: 668 PENLTT-QGYGEQYLKVNTQEANRENRRVTV 697


>gi|728644|emb|CAA59448.1| MotB [Rhodobacter sphaeroides]
          Length = 332

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 2/154 (1%)

Query: 26  TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85
            P    +W   +AD  T LMAFF+++      D+ +   +                   +
Sbjct: 27  PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
                   + +      DE    ++   + G    ++  + L+  +       +S+  + 
Sbjct: 87  TMIDFGLPTADPDGAQPDEKS--DTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEV 144

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +    E G+   +S     +          P +
Sbjct: 145 VIELSGEDGRQQAQSLARALAETAGLGPLPEPQT 178


>gi|254367946|ref|ZP_04983966.1| outer membrane associated protein [Francisella tularensis subsp.
           holarctica 257]
 gi|134253756|gb|EBA52850.1| outer membrane associated protein [Francisella tularensis subsp.
           holarctica 257]
          Length = 393

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 55/198 (27%), Gaps = 9/198 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
             + +                 D   +            + + +      +    L   I
Sbjct: 192 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 251

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
                    +    GV   T     +   +D +    F    +    +    +      +
Sbjct: 252 KQ--CEGNFNLTEDGVACYTVNGDEVTVYLDTK----FAYDKATLNAKGKKAIASFVNFI 305

Query: 260 AH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
              +   ++++G+       +     N +LS  RA +    + + G+  ++I    GF +
Sbjct: 306 KDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFGY 364

Query: 318 HRLKIASDPMNSANRRID 335
           +         +  N+R++
Sbjct: 365 NDTLGGIHKSDPRNQRVE 382


>gi|54308335|ref|YP_129355.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
 gi|46912763|emb|CAG19553.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
          Length = 168

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD   SI  PE I  L      + +    I I GHTD   ++     N +LS  R+    
Sbjct: 65  FDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTD---YQGSDDYNEKLSFRRSTVIQ 121

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333
           Q L      E+   +++ F  +   + +     N+ NRR
Sbjct: 122 QYLAARIPVENYTFEVAYFGENNPIVKAHSLKANALNRR 160


>gi|144897493|emb|CAM74357.1| Outer membrane protein and related peptidoglycan-associated (lipo)
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 280

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 75/232 (32%), Gaps = 18/232 (7%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           ++ +    ++ + +N  +      +        + L    D++ S +K         + +
Sbjct: 54  EKGESDWYDVDFFTNKARQAASGIAPAPQHPTDRGLAGRADVKASHDKLVAALAVTGATK 113

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----------Q 231
                    +       +     G  AD+I +          + +              +
Sbjct: 114 DAPDACALAQTWH-DHWLEQLEEGFQADDIAEAKNGYDKAIPLCVPKPVVAAPASPKIIK 172

Query: 232 RNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +    FD   S        +L  +  +  A     + + GHTD       A+ N  LS+ 
Sbjct: 173 QFVVYFDLGKSAITAAAKKILVDVVKDEAALKPTSVYLAGHTDTV---GNAKANEALSIK 229

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340
           R  +  + L K GV   ++  +      +L + +  +     NRR++I+ E 
Sbjct: 230 RTETVAKELAKMGV-ATKVLDMKSHGEAKLAVPTKDNVAEGKNRRVEIMFEK 280


>gi|325955198|ref|YP_004238858.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437816|gb|ADX68280.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 753

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 11/114 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   SI        L K+  +L  +      I GHTDA         N  LS  RA++ 
Sbjct: 643 FNFDQSIIRDHDFSFLDKLALLLVDNPTVNFIIEGHTDA---AGTESYNLTLSEKRAFAV 699

Query: 296 YQVLMKSGVSEDRI------SKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342
            Q L   GV   R+      +    +   +     +   N  NRR+ I +   +
Sbjct: 700 AQYLEGKGVDFSRMHILGIGTSAMKYPECKPVEMCEEWKNFENRRVVIKMNSSE 753


>gi|304413884|ref|ZP_07395301.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
           insecticola LSR1]
 gi|304283604|gb|EFL91999.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
           insecticola LSR1]
          Length = 170

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARD 283
            +  + ++N   F         E+  +L +    L       I I G+ D          
Sbjct: 58  QMQRLQRQNIIYFGYDKYDISAESTSILNEHAAFLRADPAIKIVIEGYADER---GTPEY 114

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           N  L   RA +    L   GVS  +IS +S +   +        N  + NRR  ++
Sbjct: 115 NIALGERRANAVSMYLRGQGVSNQQISIVS-YGKLKPVDLGHDENAYAKNRRAVLV 169


>gi|262164958|ref|ZP_06032696.1| outer membrane protein [Vibrio mimicus VM223]
 gi|262027338|gb|EEY46005.1| outer membrane protein [Vibrio mimicus VM223]
          Length = 81

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +  S   I + GH D +      + N  LS  RA +  + L  +    +RI +  GF   
Sbjct: 1   MVDSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRIVE-KGFGES 56

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                +  +     NRR+ + ++
Sbjct: 57  APVCTVQENAQTGCNRRVVLKIQ 79


>gi|212635870|ref|YP_002312395.1| OmpA protein [Shewanella piezotolerans WP3]
 gi|212557354|gb|ACJ29808.1| OmpA [Shewanella piezotolerans WP3]
          Length = 249

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 24/179 (13%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           K +   L     E     +  + L  L+ +       L +  + +         G+ +  
Sbjct: 77  KTQQVMLESKQSELAALNEENQSLIALSSQYEDAQQQLTSLKMAQEQKLTELALGLNVQ- 135

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
                   F   SS   P     L  +   ++ S E  + + G+ D          N  L
Sbjct: 136 --------FKTGSSTIEPHFQQQLDDVAYAMSLSPELTLDLTGYADRR---GDGDYNQAL 184

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--AN----RRIDILVED 340
           S  R       L+  GV+ +R++    +                 N    RR+ + ++ 
Sbjct: 185 SEQRVAEVTNYLVAQGVANERLN-YQAYGASSPL----TAEQNFENDFFDRRVTLKLQS 238


>gi|325578440|ref|ZP_08148575.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
 gi|325160176|gb|EGC72305.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
          Length = 285

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 18/116 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD            V+  +   L  +  + + + G+TD          N  LS  R
Sbjct: 148 GDFLFDFDKDTLTARGKEVVDSVAAQLKETGAKDVKVAGYTDRL---GSDAYNLDLSQRR 204

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DPMNSA-----NRRIDI 336
           A      L++ GV+ +      G+     ++ +                 NRR++I
Sbjct: 205 ANRVKARLLQDGVTSE--ITAIGYGK-NPQVKACDGYKHGSKAEKDCLRPNRRVEI 257


>gi|307302740|ref|ZP_07582496.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
 gi|306903104|gb|EFN33695.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
          Length = 633

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E         + ++    +  Y LPP+     +        +D  +     LS    
Sbjct: 428 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 487

Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260
           + + +    +  R    +         +T  F   S+         ++ + E +      
Sbjct: 488 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 547

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              E   I GHTDA       + N  LS +RA S   +L +  G+  + +    G+    
Sbjct: 548 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 603

Query: 320 LKIASDPMNSANRRIDI 336
           LKI +D     NRR+ I
Sbjct: 604 LKIRTDGPEQENRRVTI 620


>gi|320008837|gb|ADW03687.1| OmpA/MotB domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 216

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 16/112 (14%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+    E    +  I   +       + + G TD       +     LS  
Sbjct: 106 QAEVLFGKDSAKLSGEATARINAIALEIQTQKAPKVRVFGFTDNL---GSSAHGDVLSKQ 162

Query: 291 RAYSAYQVLMKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDI 336
           RA +        GV   ++  ++    G+       ++D  +    NRR+++
Sbjct: 163 RANAV------QGVLATKLPSVTFEIRGYGEQYPIASNDTEDGRKKNRRVEV 208


>gi|114706993|ref|ZP_01439892.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
 gi|114537543|gb|EAU40668.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
          Length = 710

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 77/256 (30%), Gaps = 13/256 (5%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
                 +++ +   +   +     ++  T  ++   ++         + Q          
Sbjct: 443 IRSDDTSRVAVDAQDQYYERLGGGRVRETIVRENGVQVVTITNRYGETIQRSRILPDGRE 502

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
                    +S   E     +    LPP+      +       +        T+     +
Sbjct: 503 VVLFYDPYAESDTAEPQFYYDPGAELPPIQYAIPESDYIVDVAEPDQALYYRTIVAPPVE 562

Query: 210 NIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265
            + +    +  R    I         NT  F   S+    E +  L+ + + ++   +  
Sbjct: 563 TVERIYSVDEVRRSKRIRDKVRRIDLNTINFGFGSAEISQEQVSNLEALAQAISEVIDQN 622

Query: 266 ----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320
                 I GHTDA         N +LS  RA +    L     V  + +    G+    L
Sbjct: 623 PDETFIIEGHTDAV---GTDLANLKLSDQRAETVAAALTNFFDVPPENLIT-QGYGEQFL 678

Query: 321 KIASDPMNSANRRIDI 336
           K+ +   N+ NRR+ +
Sbjct: 679 KVDTQDQNAENRRVTV 694


>gi|126736583|ref|ZP_01752323.1| OmpA/MotB [Roseobacter sp. CCS2]
 gi|126713896|gb|EBA10767.1| OmpA/MotB [Roseobacter sp. CCS2]
          Length = 513

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 11/176 (6%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +     L  E     +  +     ++ +    + +   +       +     + IS    
Sbjct: 337 SEEAQGLISEAGFIDQTIREASVDSQGLRVASAVVANRDFSTFPQLQQMMEQL-ISSDRL 395

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLS 288
             T  F+  SS         + ++  +L+            G TD+         N +LS
Sbjct: 396 STTFRFETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSV---GDPELNRQLS 452

Query: 289 LDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
             RA    Q L+     +  +   +  G+          ++     NRR+++ V D
Sbjct: 453 ERRAGQVVQELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWVRD 508


>gi|257057431|ref|YP_003135263.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Saccharomonospora viridis DSM 43017]
 gi|256587303|gb|ACU98436.1| outer membrane protein/peptidoglycan-associated (lipo)protein
           [Saccharomonospora viridis DSM 43017]
          Length = 223

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F   S+         ++ + ++L  A +     I GH    P         +LS +RA +
Sbjct: 122 FAADSANLDAAGRQAVKNVADLLTEAPTDWRFEIAGHVARVPGAEPE-SARKLSYERAEA 180

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
             + L+KSG+S DR+  + G+   R    S    S +RR++I V 
Sbjct: 181 VAEELVKSGLSPDRVEPV-GYGATRPLSDSGTS-SIDRRVEITVR 223


>gi|153875680|ref|ZP_02003374.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152067857|gb|EDN66627.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 238

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 12/189 (6%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           ++     S + +    +  L KE+  A+     + D    +    S              
Sbjct: 54  EAHSQNCSRDADSKARVKELLKEQPYAVAEADEVIDRESLLVLYDSKRRIKVNQN---LS 110

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
             R    +          F+   +      I  L+++           I I  HT+   F
Sbjct: 111 NCRLYTRVKPKITFRNLSFNSGKASLKRGAIYQLKEMAAAFKTIAPLKIKIHSHTNIQTF 170

Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SA 330
           +       ++ N  LS +RA +    L + G+  D I    G  + +           + 
Sbjct: 171 KGIEQEESSKRNQILSEERADTIADTLARLGIDRDYIKTF-GHGYSQPLTYELTKAALAK 229

Query: 331 NRRIDILVE 339
           N+RI+I VE
Sbjct: 230 NKRIEIKVE 238


>gi|124006521|ref|ZP_01691354.1| fibronectin-binding protein, putative [Microscilla marina ATCC
           23134]
 gi|123987934|gb|EAY27614.1| fibronectin-binding protein, putative [Microscilla marina ATCC
           23134]
          Length = 130

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S     +    + K+ + +   S   ISI  HTD          N  LS  R+ + 
Sbjct: 25  FGGGSYYIDAKQKRNIVKVIKQIKDLSKYQISITSHTDNI---GGKEYNEWLSKMRSNAV 81

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
            + L++  + + ++  I  F        +D       NRR+D+L
Sbjct: 82  LKQLIEHQIKKGKVL-IKDFGQDNPMYTNDSHNGRIRNRRVDLL 124


>gi|54309975|ref|YP_130995.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
 gi|46914414|emb|CAG21193.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
          Length = 319

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +              L ++ + L  + E    I G TD++     A  N ++S  RA + 
Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDST---GTAAINAKVSEARANAV 276

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            Q L+ +GV   R+  ++  A        +  +   R ++++++
Sbjct: 277 SQYLIDNGVDASRL-TVTSVADQNPLTDDNGKSLIERSVEVVIK 319


>gi|87307403|ref|ZP_01089548.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
 gi|87290143|gb|EAQ82032.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
          Length = 257

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 1/163 (0%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDT-KKAIEQYFNPFGKNLMTASK 81
            DD    +  W + + D M++L+ FF+++  ++    +   +A+ + F     +  + + 
Sbjct: 3   DDDDAVGIPEWVVTFGDMMSLLLTFFIMLVSMSEIKKEEHFQALVESFRRQFGHDDSMNS 62

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
            +     P      N   +   +  +      K+ +        R+       +      
Sbjct: 63  VVAGTAQPRNSHLSNLATMGRAKRFSTQEGGDKVKAPVGDSPQVRIIRPGSSTAVGTVIY 122

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
               S     E  +DL           ++         K    
Sbjct: 123 FPGESAKLTDEMKRDLQVQAQEFGGKPQKIEIRGHAAPKPLAP 165



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 8/163 (4%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP---MFDKSS 241
           A  R   L +LA    +                  +    +I             F   S
Sbjct: 68  AQPRNSHLSNLATMGRAKRFSTQEGGDKVKAPVGDSPQVRIIRPGSSTAVGTVIYFPGES 127

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVL 299
           +    E    LQ   +      + I IRGH    P        D++ L  +R  +    L
Sbjct: 128 AKLTDEMKRDLQVQAQEFGGKPQKIEIRGHAAPKPLAPGAPFVDHYDLGYERCRAVMNFL 187

Query: 300 MKSGVSEDRISKISGFAHHRLK-IASDPMNSA-NRRIDILVED 340
           +  G+   RI +IS    +    I +DP+ S  N R+++ + D
Sbjct: 188 VSLGIDPRRI-RISTAGKNEPIHIGTDPLKSKQNPRVEVFLLD 229


>gi|148974875|ref|ZP_01811855.1| outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145965384|gb|EDK30633.1| outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 180

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 6/97 (6%)

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            E+   + +    L      I I GH D+         N  LS  RA      L +    
Sbjct: 88  DESHKQVLEQYLSLVDDKSKIFIEGHADSL---GSESYNKALSSRRAGQVTSYLKEDLRQ 144

Query: 306 EDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
             RI + + +         A + +   NRR+ I V+ 
Sbjct: 145 GSRIVEYA-YGESAPICKAADNKVTGCNRRVVITVKS 180


>gi|332534875|ref|ZP_08410697.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035674|gb|EGI72163.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 243

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 10/165 (6%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPM 236
              +     +    +++        L+          VL         + I +    T  
Sbjct: 70  ADNKIAEQERAITVMKEKTSDYQHVLNHNNMLEQQLEVLANQNEQLTQVQINNLLAMTVQ 129

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS+  P   + L ++  +L +  +  + + G  D        + N  LS  R  + 
Sbjct: 130 FKTGSSVIAPHFALQLDQLVTLLNNQPQLALDLSGFADQR---GDEQANLLLSKARVNAV 186

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337
              L+K GVS  R+S    F   +    S+ +   N   RR+ + 
Sbjct: 187 QSYLIKHGVSHKRLST-QAFGEQQTLANSNTVED-NFFDRRVTLT 229


>gi|170693151|ref|ZP_02884312.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170142149|gb|EDT10316.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 242

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 232 RNTPMFDKSS---SIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286
            +  +F          LP     L  +   +    +V +I   GHTD          N  
Sbjct: 123 ESDALFPFGKSAADTMLPSAKAQLDDVAARIRKHEQVSAIEVVGHTDRL---GPESLNGP 179

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338
           LSL RA +    L+  G+    I +  G    + +                 +R + I V
Sbjct: 180 LSLARANTVRDYLIAHGLDGS-IIQAKGVGASQPRTNCADREGRALIACLQPDRYVSITV 238

Query: 339 EDRQ 342
           + R+
Sbjct: 239 QGRK 242


>gi|310814990|ref|YP_003962954.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
 gi|308753725|gb|ADO41654.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
          Length = 299

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 77/258 (29%), Gaps = 14/258 (5%)

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G F +   P R+    +          N   L +    +        + +F  + S   
Sbjct: 45  TGPFADGALPTRTIDGAVQRRAWRIADPNPNTLPLMQQIRANLQAEGYDILFDCAASACG 104

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                +               D      + +   L  L  + + A+    +L +     +
Sbjct: 105 GFDFRAGAEVIAAPAMFVDLGDFRFLAAQRDGAALSVLISKSVAAL--HVQLIEATAGAA 162

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                 +A+ +    +        +I      +   F+  S+ PLP   V L  + + L 
Sbjct: 163 PMPIAPIAEALPSWAMTLEVEGHAVI------DGLAFETGSAAPLPGADVALGALADWLR 216

Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                 + I GHTDA         N  +S  RA +  Q L           + +G  +  
Sbjct: 217 ADPARRVLIVGHTDA---SGSLAANMTISQARAEAVAQRLRSEFAVPAAQLQAAGAGYMA 273

Query: 320 LKIASDPMNSA--NRRID 335
            +  +D       NRR++
Sbjct: 274 PRAPNDDEAGRALNRRVE 291


>gi|313500679|gb|ADR62045.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
          Length = 217

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +  +   +            +  ++        ++  + ++    +   A+   + +L  
Sbjct: 32  ELVESPAAPVPYVAPSAQGQNTAQMQQTINALNIEIQSLRVRLAAAEADANGSRQELLAI 91

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
             R    I       T  F    S   P        +    A     + I G TD+    
Sbjct: 92  RARQD-QIQTSINHMTLNFAFGHSRFSPSAEDGDVLVRS--AQDALQVKIVGFTDSV--- 145

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
                N R++L RA +A   L++ GV   +IS       +    A+D     +ANRR++ 
Sbjct: 146 GTVEANRRVALLRAQAAKMYLVRRGVPAAKISAEGQEGDY--IAANDTPAGRAANRRVEF 203


>gi|325107643|ref|YP_004268711.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
 gi|324967911|gb|ADY58689.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 241

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 64/225 (28%), Gaps = 6/225 (2%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
            DD P  +  W + Y D M++L+ FF+++  ++    + K      +    +        
Sbjct: 2   DDDGPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEVKAEKK------YRAIIEAARQYMGY 55

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
               + PP +S      +     +   SV          KQ     +++  +   +    
Sbjct: 56  SGAPKAPPGKSFPLNSIVDSLHEMKLGSVSDDDKGRGGIKQKAPPGDDLKVVRLREGESQ 115

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
                         L +    +      E    P   + +  +    + +Q         
Sbjct: 116 IAGRPIVFEPGSTTLSEVDLEQIDTISREVAGKPHKLEIRAFSSPLVQGMQQTPDNRMQL 175

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
                 + + + +     +  + I+I         D  S IP   
Sbjct: 176 SYNRAHEVMDRMLENRVQKDRMRIAIYFHNPNEALDAQSPIPKDR 220


>gi|294676839|ref|YP_003577454.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
           1003]
 gi|294475659|gb|ADE85047.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
          Length = 334

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 49/245 (20%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q+ +  +  + R       L    +  K     ++  +  L ++   A+++ K+   L  
Sbjct: 59  QERDSARQDVERLLLSIARLQAQIEDLKQTVATKDARIAELERQLAEALEKLKQRDPLEA 118

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------RNTPMFDKSSSIPLPET 248
             + +               +       I  +D          + + +F          +
Sbjct: 119 YSARSTKARHEMIERLASAVKEDIAREKIEGLDVSAQGDALRFQGSGLFASGQGGLSGNS 178

Query: 249 IVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARDNWR 286
           + +++ +G  L                              + GHTDA         N  
Sbjct: 179 LRIIRLLGAHLEGQLPCFTVGPRGAIAASCNPDLVLIETVQVEGHTDAD---ASQASNLT 235

Query: 287 LSLDRAYSAYQ-------------VLMKSGVSEDRISKISGFAHHRLKIASDPMN--SAN 331
           LS+ RA SA+              +L    +    +  ++G+   R    +D     +AN
Sbjct: 236 LSMLRATSAFNAIAPDAAQDDAPPMLAFQNLLGQPVLAVAGYGEMRPIGPNDSPEGKAAN 295

Query: 332 RRIDI 336
           RRID+
Sbjct: 296 RRIDL 300


>gi|221640665|ref|YP_002526927.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221161446|gb|ACM02426.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
          Length = 485

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 68/240 (28%), Gaps = 16/240 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                    ++        +  + + +   S           ++          +  +  
Sbjct: 249 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 308

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S   +           +   +      Q L   I      +  D + +          +
Sbjct: 309 SSAPAQAAVAEAGFVDRRPSRVPLASDGQRLMNAIRIAGDEVPLDEVKRLTDLMAGADRL 368

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281
            I+         F++ +    P++   L ++ ++L       + + + G +D       A
Sbjct: 369 SITFR-------FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLIGFSDGR---GPA 418

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R N  LS +RA +    L ++ V       + GF           +     NRR+++ + 
Sbjct: 419 RANLDLSRERAETVAAALREA-VPVLGPPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 477


>gi|328947792|ref|YP_004365129.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
 gi|328448116|gb|AEB13832.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
          Length = 1053

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 252  LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD---NW-----RLSLDRAYSAYQVLMKS 302
            L+++ E+L    +   +I GH +     +        W      LS  RA      L+K 
Sbjct: 955  LKRVSEILKKFKDYKVTIVGHANRISDNSAEETEEGVWGKALISLSEQRAEYVKSQLVKF 1014

Query: 303  GVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILVED 340
            G++  R+  + G           D   N  NRR++ ++E 
Sbjct: 1015 GINSSRL-SVEGKGGTEPVADRKDTNVNWKNRRVEFILEK 1053


>gi|16125000|ref|NP_419564.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|221233721|ref|YP_002516157.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
 gi|13421980|gb|AAK22732.1| OmpA family protein [Caulobacter crescentus CB15]
 gi|220962893|gb|ACL94249.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
          Length = 407

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     F     +  PE   V+Q+  +     +   + + GHTD          N +LS 
Sbjct: 298 REFVVYFPFDQYVLTPEAQAVVQQAADYAKGGNATRVVVTGHTDT---SGSDAYNRKLSE 354

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
            R  +    L+  G++      +         + +        NRR  + +
Sbjct: 355 RRGRAVADGLVGMGLNAA-TVAVDWKGEKAPAVETGDGVKEPLNRRSSVSI 404


>gi|300024245|ref|YP_003756856.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526066|gb|ADJ24535.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 602

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285
             +   F+  S    P     L+++   +         EV  I G+TDA        DN 
Sbjct: 449 DLDDINFEFGSWEVDPGEYRKLERVARAMKRVISRNPNEVFMIEGYTDAV---GSQEDNL 505

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
            LS  RA S  +VL +   V  + +    G+    LK+ +      NRR+
Sbjct: 506 SLSDRRAESVAEVLTEEFQVPFENLVT-QGYGEDYLKVPTQAAERLNRRV 554


>gi|261415252|ref|YP_003248935.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371708|gb|ACX74453.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325746|gb|ADL24947.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 654

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S    E+   L ++   L +       I  HTD       +R    L+L RA   
Sbjct: 483 FGVGQSKFTRESSDGLNRLAAHLRNYNGKTIEIVSHTDNLDRPERSR---VLALKRAEEV 539

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
              L+ +G+S   I   +G       + +        N RI++ V
Sbjct: 540 KSYLVMAGLSGQDIIA-TGKGGDEPLVPNTTPDNRMKNNRIEVFV 583


>gi|224456780|ref|ZP_03665253.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254874523|ref|ZP_05247233.1| fopA, outer membrane associated protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254840522|gb|EET18958.1| fopA, outer membrane associated protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|282158878|gb|ADA78269.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 392

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 381


>gi|254255076|ref|ZP_04948393.1| Flagellar motor protein [Burkholderia dolosa AUO158]
 gi|124899721|gb|EAY71564.1| Flagellar motor protein [Burkholderia dolosa AUO158]
          Length = 352

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 3/171 (1%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
            L+   + E     +    +   D               +  + P + +           
Sbjct: 108 VLAARDEEETRIKLIEMSEQAMYDGGAGMFDGTGSAPSLDEPIGPRAIDPSTGAVTWDAD 167

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
             LA+  +          +   +    T  G+ + + D  +  +F++ S++P P    +L
Sbjct: 168 DGLAQLAARFDRLGADAGLQDNLRSVMTPFGLRLMLHDSESQGVFERGSAVPAPPFRPLL 227

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQVLM 300
            K+G + A +   + + GHTD+ P+R      R NW LS DRA SA + L+
Sbjct: 228 DKMGALFAQTDSPLLVIGHTDSVPYRKYGLGGRSNWHLSADRAMSARRALV 278



 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 2/133 (1%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
              + +  D   I+K+        ++ G+WK+ +ADF   LM  FL++W++ A D++  +
Sbjct: 59  GAKRGRHADGDTIVKRAPRRAHDHDHGGNWKVAFADFCLALMCLFLLLWVLAARDEEETR 118

Query: 64  AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
              +      + +     G+FD         +     +ID      + D   G      +
Sbjct: 119 --IKLIEMSEQAMYDGGAGMFDGTGSAPSLDEPIGPRAIDPSTGAVTWDADDGLAQLAAR 176

Query: 124 YQRLENNIFYLSN 136
           + RL  +     N
Sbjct: 177 FDRLGADAGLQDN 189


>gi|260555968|ref|ZP_05828188.1| small protein A [Acinetobacter baumannii ATCC 19606]
 gi|260410879|gb|EEX04177.1| small protein A [Acinetobacter baumannii ATCC 19606]
          Length = 259

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           I D   + +F           E    + KI E +  S     I + G TD          
Sbjct: 141 IADCTASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPL---GKFSY 197

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN-----SANRRID 335
           N  LS  RA +  ++L++ GV   RI +I   +   L      ++        + NRR++
Sbjct: 198 NQELSSKRANTVAKLLVRQGVEPSRI-QIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVN 256

Query: 336 I 336
           I
Sbjct: 257 I 257


>gi|270293956|ref|ZP_06200158.1| major outer membrane protein OmpA [Bacteroides sp. D20]
 gi|270275423|gb|EFA21283.1| major outer membrane protein OmpA [Bacteroides sp. D20]
          Length = 374

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 70/268 (26%), Gaps = 16/268 (5%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +    + +    +  +  P      + +  +            ++      E   +  + 
Sbjct: 107 LFAGVNPNRFFEVYGFLGPQISVAKSQNVDV-----TISADGTSQSMTPAGEAEMRARIG 161

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
              G   +     +   ++        S     S  R +E    L           K   
Sbjct: 162 ASAGLGLKFNINTKWAIDVEARGAIAPSIFGNISSHRKAEGTGMLTAGVSYIFGGKKFVK 221

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                         + +  L        + L+             +     + +      
Sbjct: 222 ASNIDEDAINAEINRYRSELAQAQ----ADLANCKNALANAKPEVKEVTKEVEV---AGP 274

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+       V +Q   ++L  + +    + G+ D       A  N +LS  R
Sbjct: 275 RAIFFKIGSARLDDYGKVNIQLAAKILKANPDRKYKVAGYCD--KATGSASWNQKLSEKR 332

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319
           A   Y  L+  GVS+D++  + GF    
Sbjct: 333 AQVVYDALIAEGVSKDQLELV-GFGGTE 359


>gi|220935619|ref|YP_002514518.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996929|gb|ACL73531.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 280

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S         L+++     A     + + GH D    R     N  LS  RA + 
Sbjct: 178 FDTNLSRLDARAHETLREVLTAWRAQRHMRVIVAGHAD---VRGGDTINDPLSRRRAEAV 234

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
              L   G+  +RI ++  F           +   + NRR  + +
Sbjct: 235 RTFLDVYGIPRNRI-ELRSFGATWPLDPGEGEAAWALNRRATVWL 278


>gi|320531947|ref|ZP_08032850.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135840|gb|EFW27885.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 227

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 14/186 (7%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
             +                     L  +      +  +        +            T
Sbjct: 44  PAEPHAVPPVVAPAKNATPDPTPTLKPQESSGSGESRQVQPLDRRVVPVSRSSSSDSAVT 103

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFR 278
             +    ++        FD  SS        VL  I           +++ GHTD+    
Sbjct: 104 YSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDDIVKRWNGKPPATVTVVGHTDSV--- 160

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSA 330
                N  LS  RA +    L    V    +   SG        +        ++   +A
Sbjct: 161 ADDAHNQTLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAA 218

Query: 331 NRRIDI 336
           NR +D+
Sbjct: 219 NRHVDV 224


>gi|295836759|ref|ZP_06823692.1| secreted protein [Streptomyces sp. SPB74]
 gi|295826190|gb|EFG64725.1| secreted protein [Streptomyces sp. SPB74]
          Length = 204

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 10/133 (7%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           V +++      E T T + I++  +    +FDK      P     ++ I +         
Sbjct: 73  VVEDLGGEERREDTNTDVKIALQAE---VLFDKDKFALDPSGRSRIEAIADEAKKQRART 129

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
             + G TD             LS  RA   +  L    +  +   ++ G++       + 
Sbjct: 130 VRVFGFTDNL---GSYAHGKTLSKRRADIVHDELAPH-LGPEVTFEVRGYSEDYPIADNT 185

Query: 326 PMNSA--NRRIDI 336
                  NRR++I
Sbjct: 186 TEEGRRKNRRVEI 198


>gi|90418977|ref|ZP_01226888.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337057|gb|EAS50762.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 177

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +    L   ++   +  GH D          N  L   R
Sbjct: 68  DRVFFDTDSTSLRADAQQTLTQQARWLNQYSQYSIVIEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L++ GV  +R+  IS +   R           S NRR  + V    G
Sbjct: 125 AAATRDYLVQQGVPANRMRTIS-YGKERPVAVCDDISCWSQNRRA-VTVLSGAG 176


>gi|302553861|ref|ZP_07306203.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471479|gb|EFL34572.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
           DSM 40736]
          Length = 213

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 10/208 (4%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           N  ++E    ++   +              +   +   + P         +K      DL
Sbjct: 2   NDARTETPHLAIVIAAASLVLATNVFAAASAHAADGPSYPPGTQPNAAAPVKVDANDPDL 61

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIVV 251
                +TL+     +I   V  E+       +  D     +   +F K S+    +    
Sbjct: 62  KLVEGATLADAKVLDIKTVVEDESGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKAR 121

Query: 252 LQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +  I E +   + + I + G TD       +     LS  RA +   VL           
Sbjct: 122 IADIAEEIKAQNAKKIRVFGFTDNL---GSSAHGDALSRRRASAVQGVLEGELADSGITY 178

Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDI 336
           +  G+        +        NRR+++
Sbjct: 179 ETRGYGEQYPIADNSTEAGRKKNRRVEV 206


>gi|290953550|ref|ZP_06558171.1| outer membrane protein FopA [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313154|ref|ZP_06803836.1| outer membrane protein FopA [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 392

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 381


>gi|56707711|ref|YP_169607.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670182|ref|YP_666739.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254370217|ref|ZP_04986223.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|56604203|emb|CAG45216.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320515|emb|CAL08599.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568461|gb|EDN34115.1| outer membrane associated protein [Francisella tularensis subsp.
           tularensis FSC033]
          Length = 393

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382


>gi|229495588|ref|ZP_04389321.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406]
 gi|229317571|gb|EEN83471.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406]
          Length = 415

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 13/188 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
               K               +     +P        A ++     +  KK          
Sbjct: 235 EGGLKLTYAFGKQRKRTEALEPIEPGMPEGDAHYEHAARKVDNEPEATKKTEPLDQSTTT 294

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VIS 267
                 V      +   I       T  F  +S+    E  V +Q+   +L  + +  I 
Sbjct: 295 APPSPEVSIAPVESAAAIDFP----TVYFAFNSATISSEEEVKMQQTLRLLQENPKLNII 350

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I G  D       A  N R+S  RA +    L   G+S  RI  + G      +  ++  
Sbjct: 351 IIGWCDTV---GNAAVNLRMSQKRAEALKTWLTSRGISAARIKAV-GRG----RDFNEKE 402

Query: 328 NSANRRID 335
            +  RR +
Sbjct: 403 AAKARRSE 410


>gi|160889622|ref|ZP_02070625.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492]
 gi|156860614|gb|EDO54045.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492]
          Length = 379

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/268 (10%), Positives = 72/268 (26%), Gaps = 16/268 (5%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +    + +    +  +  P              +    + +              +  + 
Sbjct: 112 LFAGANPNRFFEVYGFLGPQISVA---------KSQNVDVTISADGTSQSMAPAGEAEMR 162

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
            +IG++        +         ++ +          S +  +         S      
Sbjct: 163 ARIGASAGLGLKFNINTKWAIDVEARGAIAPSIFGNISSHRKAEGTGMLTAGVSYIFGGK 222

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
            F+P    ++        R +    +  + L+             +     + +      
Sbjct: 223 KFIPVSKIDEDAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEV---AGP 279

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+       V ++   ++L  + +    + G+ D       A  N +LS  R
Sbjct: 280 RAIFFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSASWNQKLSEKR 337

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319
           A   Y  L+  GV +D++  + GF    
Sbjct: 338 AQVVYDALIAQGVDKDQLELV-GFGGTE 364


>gi|327402931|ref|YP_004343769.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327318439|gb|AEA42931.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 254

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 11/103 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F       LP +   +  + E L    T  I++ GH            N  LS  RA   
Sbjct: 153 FAYGLDAMLPSSYNDIHFLIETLQADKTLFITLAGHVCC----GTDSKN--LSGMRAERI 206

Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRID 335
            Q+L+  G +S  RI+ I GF + +     D      ANRR++
Sbjct: 207 KQILIMEGSISSSRINAI-GFGNKKPLFEDDTEIHRQANRRVE 248


>gi|269122960|ref|YP_003305537.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314286|gb|ACZ00660.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2078

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%)

Query: 161  TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
             +     N   N     L ++    + + K+L++   ++    +  + D I +       
Sbjct: 1899 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDRLRRE-NDRIGDEIKELRERIKA 1957

Query: 221  RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278
               I ++  D      +             +L  I   L  + +     I G+TD     
Sbjct: 1958 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2014

Query: 279  NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335
            +    N  L L RA    + L + G+     I K+S   ++ +   +   N    NRR++
Sbjct: 2015 SGENLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2074

Query: 336  ILVE 339
            I + 
Sbjct: 2075 IELR 2078


>gi|149370443|ref|ZP_01890132.1| OmpA domain protein [unidentified eubacterium SCB49]
 gi|149355994|gb|EDM44551.1| OmpA domain protein [unidentified eubacterium SCB49]
          Length = 432

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 6/139 (4%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               L  D+        T  + I   +        F  +SS P   ++  +  +   L  
Sbjct: 297 EARYLNKDDYKPSPNTVTNGSVIKDLLEKGYVNVYFKTNSSTPEKYSLEAVNYLKTYLIQ 356

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           +      + G+ D          N +LS  RA   Y +L+ SG+  +R+S  +G      
Sbjct: 357 NPSASAQLIGYADEI---GNEAYNAQLSEKRAKRVYDILVASGIDANRLSH-TGNGEDTS 412

Query: 321 KIASDPM-NSANRRIDILV 338
              +        RR+   +
Sbjct: 413 VDKNSSEARQLVRRVTFKL 431


>gi|86141022|ref|ZP_01059581.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
 gi|85832964|gb|EAQ51413.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
           MED217]
          Length = 268

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 13/208 (6%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
            D +            +     +K    +        S      +   +L  +S++ ++L
Sbjct: 56  EDQAAQLEKELAQATSERDDLQRKYATAQANLKNLQDSYDALEANSSKALAENSKQNREL 115

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL-------AKKISSTLSGLVADN 210
               D +++    E   L  + ++     +R + L+ +        + +   +S  + D 
Sbjct: 116 LAQLDEKQADLAAEQNRLEKMQRDLTERSRRVEELESMIAAKDAKMRALKDAISKALVDF 175

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269
              G+  E     + +S+    N  +F+  S     +    + ++G VLA + E+   I 
Sbjct: 176 EGNGLTVEQRDGKVYVSL---ENKLLFESGSWNVGAKGRQAVNQLGSVLAQNPEIAVLIE 232

Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSA 295
           GHTD  P+      +DNW LS  RA + 
Sbjct: 233 GHTDDVPYGGNGPLKDNWDLSTKRATAI 260


>gi|169656658|ref|YP_001428834.2| OmpA (outer membrane protein A) family protein [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|164551726|gb|ABU61878.2| OmpA (outer membrane protein A) family protein [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 393

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382


>gi|57339654|gb|AAW49814.1| hypothetical protein FTT0583 [synthetic construct]
          Length = 428

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 309 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 368

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 369 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 408


>gi|325277486|ref|ZP_08143089.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324097373|gb|EGB95616.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 435

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/284 (9%), Positives = 71/284 (25%), Gaps = 14/284 (4%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              + +                G F+       + Q+    +       +       ST+
Sbjct: 160 QRWEELGISGGAIHLYARDDRSGTFETFKALVLAPQHAALSAQARRFESSDELAAGVSTD 219

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           ++         I        +E    ++                        N   P  +
Sbjct: 220 RQAIGFSSLAAIHGAKVLAVAEGDAPAMLPARALVASEDYPLSRRLYFYLPANPKPPAKA 279

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
                     + +      +S  +  L                 +            F  
Sbjct: 280 LADFAQSPAGQAIVAQQGFVSQQIQALPV---PPQAGMPPRYRNLAKQAQRLSVNFRFQA 336

Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            S+    + +  ++++ + L           + G  D       A     LS  RA +  
Sbjct: 337 GSANLDNKALRDVRRVADYLHQAGKLQGKTVLVGFGDPKLTPGRAAL---LSRLRAQAVR 393

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           + L ++GV+   + +++G         ++       N+R+++ V
Sbjct: 394 RQLARNGVA---VLQVTGMGAELPVAGNEREQGRLHNQRVEVWV 434


>gi|54302438|ref|YP_132431.1| OmpA family protein [Photobacterium profundum SS9]
 gi|46915860|emb|CAG22631.1| hypothetical OmpA family protein [Photobacterium profundum SS9]
          Length = 252

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 68/254 (26%), Gaps = 27/254 (10%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
             L     +T         +    +                               G  +
Sbjct: 7   TTLVTAALLTSAMAPTAYANQADLQTADDTYVVGEQEQLIGLGSGAAFGALVGGPVGAII 66

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVL 216
                        ++  +   +++ +    R   L+ +    +   +        ++   
Sbjct: 67  GAMVGGIVGTAVGQDEQIKSQNEDMVELTARNTELERIDINYNQAQIEIARLQQDLQLQS 126

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275
            E     + +++        F   SS   P     L +I E++  S E+   + G+ D  
Sbjct: 127 EERQALMLEVNVH-------FRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRR 179

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---- 331
                ++ N+ LS+ R  +    L   G+  D++  +  +       +       N    
Sbjct: 180 ---GDSQKNFDLSMRRVDAVRDYLESQGLDTDQLL-VDAYGDLEPLKSE-----QNFESD 230

Query: 332 ---RRIDILVEDRQ 342
              RR+   +   Q
Sbjct: 231 FFDRRV--TLRSTQ 242


>gi|315633444|ref|ZP_07888734.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
 gi|315477486|gb|EFU68228.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
          Length = 273

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 13/112 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD +      + + V+  I + L     + +++ G+TD        R N  LS  R
Sbjct: 141 GDFLFDFNKDTLTAQGVEVIDNIAQQLKSAKAKEVTVDGYTDRL---GSDRYNLALSQRR 197

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA------NRRIDI 336
           A      L + G+    I  I G        A D    +       NRR++I
Sbjct: 198 ADRVKARLAELGLKA-HIVAI-GHGKANQVKACDGSGQALKDCLAPNRRVEI 247


>gi|193076753|gb|ABO11465.2| putative antigen [Acinetobacter baumannii ATCC 17978]
          Length = 259

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           I D+  + +F           E    + KI E +  S     I + G TD          
Sbjct: 141 IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 197

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334
           N  LS  RA +  ++L++ GV   RI +I   +          +++        + NRR+
Sbjct: 198 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSSNNSSQLIQCLAPNRRV 255

Query: 335 DI 336
           +I
Sbjct: 256 NI 257


>gi|115315051|ref|YP_763774.1| outer membrane protein FopA [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129950|gb|ABI83137.1| outer membrane protein FopA [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 393

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382


>gi|270293963|ref|ZP_06200165.1| major outer membrane protein OmpA [Bacteroides sp. D20]
 gi|270275430|gb|EFA21290.1| major outer membrane protein OmpA [Bacteroides sp. D20]
          Length = 355

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 72/267 (26%), Gaps = 21/267 (7%)

Query: 53  IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112
           +    + +    +  +  P      +A+  I ++        +                +
Sbjct: 93  LFAGVNPNRFFEVYGFLGPQVTVAKSANVLIQNDGTMIPDGDEKARARVGASAGLGLKFN 152

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           +        +    +  ++F   +S +      +LT          K   + K      N
Sbjct: 153 INTKWAIDVEARGAIAPSVFGNISSHRKAEGTGTLTAGVSYIFGGKKFIPVSKIDEDAVN 212

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +     E   A       ++        +  +  +                   +   
Sbjct: 213 AEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVE-----------------VAGP 255

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
               F   S+       V ++   ++L  + +    + G+ D          N +LS  R
Sbjct: 256 RAIFFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSTSWNQKLSEKR 313

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH 318
           A   Y  L+  GV +D++  + GF   
Sbjct: 314 AQVVYDALIAQGVDKDQLELV-GFGGT 339


>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
 gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
          Length = 387

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 18/123 (14%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD   +   P     L K+   L +   +VI + GHTD          N +LS  RA
Sbjct: 269 DSLFDFDKASLKPTGQQDLDKLAAELKNTQFDVIKVTGHTDRI---GSHAYNQKLSERRA 325

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA------------NRRIDILVE 339
            +    LM S G++ D+I    G                            +RR+++ V 
Sbjct: 326 EAVKGYLMTSIGIAGDKIVT-KGVDGAEPVTKPGECQGKKVSKALIACLQPDRRVEVEVV 384

Query: 340 DRQ 342
             +
Sbjct: 385 GTR 387


>gi|332184172|gb|AEE26426.1| OmpA family protein [Francisella cf. novicida 3523]
          Length = 392

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +    + +   +   ++++G+             N +LS  RA +
Sbjct: 282 FAYDKATLNAKGKKAIASFVKFIKDSNIGSVTVKGYASQGQTGGEFDIYNQKLSKKRAEA 341

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF +          +  N+R++
Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381


>gi|254369500|ref|ZP_04985512.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122450|gb|EDO66590.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 375

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 265 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 324

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 325 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 364


>gi|326773952|ref|ZP_08233234.1| OmpA family protein [Actinomyces viscosus C505]
 gi|326636091|gb|EGE36995.1| OmpA family protein [Actinomyces viscosus C505]
          Length = 199

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++        FD  SS        VL +I           +++ GHTD+         N 
Sbjct: 83  TVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSV---ADDAHNQ 139

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336
            LS  RA +    L    V    +   SG        +        ++   +ANR +D+
Sbjct: 140 TLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAANRHVDV 196


>gi|296158523|ref|ZP_06841353.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
 gi|295891091|gb|EFG70879.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
          Length = 359

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 69/249 (27%), Gaps = 15/249 (6%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
           +  +I +  T           +      R  + +        +    +       + +  
Sbjct: 109 VQEAIGQAATITMGLENGTPLSAANPALRTVSTVRPDLWKIVNTIKADPAVVQCPQAQQP 168

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
               ++E +    + +     + EK L   +    Q   + +  T +     +    V  
Sbjct: 169 LACAEVELAQAGHDAWRRSFTNAEKRLPEVQDNLRQSAQRALQCTPAVQAPASTSAPVPV 228

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDAS 275
              R    I++             +  LP     L  +   L ++     + I G+ D  
Sbjct: 229 PAARPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLKNAPALHELKITGYADRL 288

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN------ 328
                   N  LS+ RA +  + L   GVS        G       +             
Sbjct: 289 ---GDKSYNLDLSMQRARTVERYLRAHGVSLP--MTAQGRGSANPLVDCRRTKRDALMQC 343

Query: 329 -SANRRIDI 336
            + NRR++I
Sbjct: 344 LAPNRRVEI 352


>gi|332969794|gb|EGK08805.1| OmpA/MotB domain protein [Psychrobacter sp. 1501(2011)]
          Length = 211

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR-DNWRLSL 289
                +++ SS    E +  L KI  ++    +  +S+  H      +      N  LSL
Sbjct: 85  EYRGFYEEGSSQLTKEYLNELDKIAGLMEKYPDAFMSLEAHISEPESKLKKNLSNQTLSL 144

Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341
            R       L+ K  +  +RI   + +   R   ++D +     N+R+  ++ + 
Sbjct: 145 ARVEGVKNYLILKHKIDPNRIRTYT-YGAERPIASNDEVEGIRLNQRVYAVIRND 198


>gi|134302319|ref|YP_001122288.1| ompA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050096|gb|ABO47167.1| ompA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 393

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF ++         +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382


>gi|21328690|gb|AAM48696.1| OmpA family protein [uncultured marine proteobacterium]
          Length = 488

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 93/311 (29%), Gaps = 26/311 (8%)

Query: 51  MWIINA-TDDDTKKAIEQYFNPFGKN--LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107
           +++ +  ++ +    + Q     G+   L   + GI        +  Q +    +     
Sbjct: 182 LYLYSQPSNPNRFITMSQLVAMLGEEPGLWPLTAGIQYPAFLTGKDDQTQALQQLLRVFE 241

Query: 108 KNSVDLKIG-----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
                   G               +    ++  N          +   + L         
Sbjct: 242 PPRPMPPKGVNTPGRLTVSTDQVAQDTLVQVSLNCDQPMAPADIQAPAHPLQAPIYLIAA 301

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             K  ++ ++            +   +  + R  +  ++  +    ++ ++  ++     
Sbjct: 302 PKKMQNITRAFWAFLLTPEAQDAVRTLGFISRSPKKTEIHGQSGLLINAILNTDMDMRTE 361

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISI--RGHTD 273
                   L           F +   I   ++   LQ +    +A   E   +   G +D
Sbjct: 362 DLRLAVLNLNGYERMSLAFRFLEGMQIMDADSQSNLQFLKRLFVAGYFEGRDVMFVGFSD 421

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS---KISGFAHHRLKIASDPMNS- 329
           +      A  N ++SLDRA +     + + + + ++S   ++ G         +D     
Sbjct: 422 SQ---GSAEGNVQISLDRARAVRAT-IATLLDDSQLSDGFEVLGLGEGLPLACNDTAWGQ 477

Query: 330 -ANRRIDILVE 339
             NRR++I V+
Sbjct: 478 NQNRRVEIWVK 488


>gi|325068018|ref|ZP_08126691.1| OmpA/MotB [Actinomyces oris K20]
          Length = 139

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           ++        FD  SS        VL +I           +++ GHTD+         N 
Sbjct: 23  TVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSV---ADDAHNQ 79

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336
            LS  RA +    L    V    +   SG        +        ++   +ANR +D+
Sbjct: 80  TLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAANRHVDV 136


>gi|332293247|ref|YP_004431856.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171333|gb|AEE20588.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 275

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278
            + + I+         F   +       +++ L+K+   L         I GH   SP R
Sbjct: 151 YSELEINETTVLFGVFFKGGTDKMLGSSSVITLRKVVRFLEGYPTRKILITGHICCSPDR 210

Query: 279 NIA---RDN----WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
                  +N      LS DR    Y  L+K+G+S  R+    G A+       D   + N
Sbjct: 211 EPQLDGYNNRTGSMTLSEDRGKMVYDYLIKNGISAGRLK-YRGKAYTEPL---DWEETKN 266

Query: 332 RRIDILVED 340
           RR+++ + +
Sbjct: 267 RRVEMTILE 275



 Score = 41.5 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 14/106 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  S   + +  V L  + +     +  + ++G+TD          N +L+  R  +  
Sbjct: 26  FNTDSYEVVSKERVKLDSLVKHHDRDSIRLVLKGYTDQF---AGRDYNLKLAQRRVAATK 82

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           + L    +    +  I      +         +  RR+DI V  ++
Sbjct: 83  EFLKAFTIDT--LQAI---GELQ----DASWRA--RRVDISVIVKE 117


>gi|254457971|ref|ZP_05071398.1| putative membrane protein [Campylobacterales bacterium GD 1]
 gi|207085364|gb|EDZ62649.1| putative membrane protein [Campylobacterales bacterium GD 1]
          Length = 393

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 104/376 (27%), Gaps = 69/376 (18%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
             D   +   W I YAD M  L+  F+ + ++ A    T                  S  
Sbjct: 3   KQDKNESQNFW-ISYADLMAGLL--FVFILVVGAIVVKTLLMQSDLQTIRLNLEKEKSAL 59

Query: 83  IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142
              E    E+  + +  +S  +   + ++ L +  +  K +   L+N +  L+   +++ 
Sbjct: 60  ELSESQLFEKKKKLRELVSKLQASREENMRLSMQISMLKSETDELKNEVSILNLDIKTKA 119

Query: 143 CKNSLTR---------------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            K +L+                D+   +        E    K E   L    +      +
Sbjct: 120 SKLTLSEKEMQLLKELLLENEEDANMLRYKIDILHKEVEGTKTEITQLQSFVQSANARHE 179

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-------------- 233
                  +  +  + L   +                  I I +                 
Sbjct: 180 LDSSFIKIRDEEIAQLEKALLLKSRDYQRVIEDLNITKIKIKNLTGIKISVVQRLKKKLG 239

Query: 234 ----------------TPMFDKSSSIPLPETIVVLQK----------IGEVLAHSTEVIS 267
                             +F +  +   P     L +              +    ++I+
Sbjct: 240 NSIEIDPQTGALRFSSNILFTQGEAELKPSAKKELSRILGKYIDVLLNDPKMRRYVDLIT 299

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKI 322
           I GHT++         N  LS  RA +  + L       +R         SG +     +
Sbjct: 300 IEGHTNSD---GSYLFNLDLSQRRALAVMEFLYTQ-YPNNRELFKKYLSASGRSFAEPIL 355

Query: 323 ASDPMNSAN--RRIDI 336
            ++     +  RRI+I
Sbjct: 356 DANKKEDKDASRRIEI 371


>gi|163854145|ref|YP_001642188.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|163665750|gb|ABY33117.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
          Length = 717

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 11/209 (5%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              + +     +           +                   P +   +   +   ++ 
Sbjct: 491 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 550

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251
            + A   + +   +   +    +        +   +     NT  FD  S    P+    
Sbjct: 551 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 610

Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
           L  I E +  +      EV  I G+TDA        DN  LS  RA S   VL ++  V 
Sbjct: 611 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 667

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRI 334
            + ++   G+    LK+ +   N  NRR+
Sbjct: 668 PENLTT-QGYGEQYLKVNTQEANRENRRV 695


>gi|126463592|ref|YP_001044706.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105256|gb|ABN77934.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 512

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/240 (10%), Positives = 65/240 (27%), Gaps = 16/240 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                    ++        +  + + +   S           ++          +  +  
Sbjct: 276 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 335

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S   +           +   +      Q L   I      +  D + +          +
Sbjct: 336 SSAPAQAAVAEAGFVDRRPSQVPLASDGQRLMNAIRIAGDEVPLDEVKRLTDLMAGADRL 395

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281
            I+         F+  +    P++   L ++ ++L         + + G +D       A
Sbjct: 396 SITFR-------FEAGTDSLEPQSRESLSELIKLLEIGRFRGHELMLVGFSDGR---GPA 445

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + N  LS +RA +    L  + V E     +  F           +     NRR+++ + 
Sbjct: 446 KTNLDLSRERAETVAAALRAA-VPELGPPLVESFGEALPLACDTTVAGRRMNRRVELWLR 504


>gi|89052778|ref|YP_508229.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88862327|gb|ABD53204.1| phosphate ABC transporter substrate-binding protein, PhoT family
           [Jannaschia sp. CCS1]
          Length = 513

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + L+  I +    +    +   +    +   +  ++        F+   +    ++  
Sbjct: 368 QGERLSNAIRAAGEDVDLQELQTVMEVLDSAERLSTTLR-------FNAGGADLDIQSRA 420

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRI 309
            + ++   +   T           S     +  N RLSL RA      +M +GV+  DR+
Sbjct: 421 SVGRLAAAIERGTFDGRQLIFAGFSDGDGPSTVNARLSLRRADVVRDAVMAAGVAALDRV 480

Query: 310 SKIS-GFAHHRLKIASDPMNSA--NRRIDILVE 339
             ++ GF         D       NRR+++ V+
Sbjct: 481 ELVTVGFGEAMPMACDDTDWGRAVNRRVEVWVD 513


>gi|301165251|emb|CBW24822.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 381

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 6/129 (4%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISI-IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +   V   + + V  +     I+ ++  D      F+    +    +   L ++ E+L 
Sbjct: 231 EIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVITATSERTLDRLAELLK 290

Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +    I G+TDA   +     N  LS  RA   +  L+  GV   R+ K  G     
Sbjct: 291 SYPDSRFLITGYTDA---KGSDSYNLTLSARRAEKVHAALIGRGVPA-RMIKWRGVGKRA 346

Query: 320 LKIASDPMN 328
             I++   +
Sbjct: 347 AIISATAAD 355


>gi|115377102|ref|ZP_01464317.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|310822806|ref|YP_003955164.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115365877|gb|EAU64897.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
 gi|309395878|gb|ADO73337.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 381

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 36/117 (30%), Gaps = 17/117 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288
           F   S+         L      +A +             + GHTD+         N  LS
Sbjct: 256 FASGSAELAVGERGKLDHSHARIAEAVSRYGRFAALRLYVLGHTDSV---GATASNRELS 312

Query: 289 LDRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342
           L RA S      K G+   R+     GF      +    +     NRR + ++   +
Sbjct: 313 LQRARSIAAYFHKRGL---RLPIFYEGFGEQAPAVMTPDETAEVGNRRAEYILAVDE 366


>gi|146278796|ref|YP_001168955.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557037|gb|ABP71650.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 499

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 65/228 (28%), Gaps = 20/228 (8%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
            +  L + +   S           +T          +  +   +   +           +
Sbjct: 281 GFPLLPSPLAVKSEDYPLSLPVFLVTPRRRLPLFAREFLEFLSTAPAQRAVAEAGFVDRR 340

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
              +      Q L   I      +    + +          + I+         F++  +
Sbjct: 341 PSRVPLVSDGQRLMNAIRVAGEEVPLAELKRLTGLMAGAERLSITFR-------FEEGGN 393

Query: 243 IPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
               ++   L  + +++       + + + G +D       A  N  LS DRA +  + L
Sbjct: 394 KLEAQSREALTDLVKLVEVGRFRDQQLMLVGFSDGR---GSAEANLSLSRDRAATVARAL 450

Query: 300 MKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
            ++   ++      + GF           +     NRR+++ +    G
Sbjct: 451 QEAAPDLAPP---LVEGFGEALPLACDTTVAGRRMNRRVELWLRPLTG 495


>gi|318079837|ref|ZP_07987169.1| secreted protein [Streptomyces sp. SA3_actF]
          Length = 166

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
           +   +FDK      P     ++ IGE           + G TD             LS  
Sbjct: 57  QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 113

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA   +  L +  +  +   ++ G++       +        NRR+++
Sbjct: 114 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 160


>gi|126661869|ref|ZP_01732868.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
 gi|126625248|gb|EAZ95937.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
          Length = 295

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 15/154 (9%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + ++     +  L   V  +       +     ++ ++     + +F   S   + E + 
Sbjct: 152 QFEEARVPDADELIEPVELHQTPYDTAKVGDKLVMNNLYFYDRSGIFVPESLPVMEELLE 211

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
            +      +AH    I I+GH       +       ++L RA + +  L+ + + + R+ 
Sbjct: 212 FM------IAHPKVKIEIQGHICCQLGEDPE----DIALIRAIAVHNYLVANDIDDKRLM 261

Query: 311 KISGFAHHRLK----IASDPMNSANRRIDILVED 340
               F   +        ++   + NRR++IL+ +
Sbjct: 262 -YKSFGSTQPLHKIPEKNEKERNENRRVEILILE 294



 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 12/111 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           ++ +  FD       P+   +          + E++ I G+ D          N  L+  
Sbjct: 16  EKESFYFDFDQDKFNPKQNELFLTWLNK-DENREILIINGYCDWY---GTFDYNDTLAYK 71

Query: 291 RAYSAYQVLMKSGVS----EDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           R  +    L     +     D+I  I G+      + +      NRR+D+ 
Sbjct: 72  RINTIQNELQTKENATIFFSDKII-IKGYGER---VQTRKERRFNRRVDVF 118


>gi|126641083|ref|YP_001084067.1| putative antigen [Acinetobacter baumannii ATCC 17978]
          Length = 174

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           I D+  + +F           E    + KI E +  S     I + G TD          
Sbjct: 56  IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 112

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334
           N  LS  RA +  ++L++ GV   RI +I   +          +++        + NRR+
Sbjct: 113 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSSNNSSQLIQCLAPNRRV 170

Query: 335 DI 336
           +I
Sbjct: 171 NI 172


>gi|239816686|ref|YP_002945596.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239803263|gb|ACS20330.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 401

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 63/236 (26%), Gaps = 12/236 (5%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
           D  + +           N                          +   ++ + +      
Sbjct: 164 DATLDTRPTAFFRDSPVNGKDRGVEGYIRTAETQPGQAADALYLERLPTSTVLQEATAAY 223

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                  +  +  A  R+   Q L       L+               T   + +   + 
Sbjct: 224 EAGRMSEALSRYEAASRRPDGQQLRIYSGLYLTQASLGRTADAEKTFGTLARLGLETNNL 283

Query: 232 RNTPMFDKSSSIP------LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
               +F   S+             + L++I    A     + + GHT  +        N 
Sbjct: 284 SVKFLFKPGSTDFLADPKISAAYPMWLRQIARQAAQIDSCVVVTGHTSRT---GSESVNE 340

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANRRIDILV 338
           RLSL RA S    L+       +  + SG       +   A D  ++ +RR++  V
Sbjct: 341 RLSLQRALSVKTRLVGEAPPLSKKLRESGMGFRENIVGTGADDASDALDRRVEFKV 396


>gi|91786622|ref|YP_547574.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
           JS666]
 gi|91695847|gb|ABE42676.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
           JS666]
          Length = 658

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 7/221 (3%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
              Q    +   +  ++     +  +    +       +     S           + + 
Sbjct: 442 PSAQDAGQDRTGIDPAELCPQDETVVATVDQIKARFAVAPRRTGSYVVLLPNPDNSVGRV 501

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
            +   + ++ L    +      S    +     V  +          + +  T  F + S
Sbjct: 502 VVQGNRGEQTLAQAQQGTLLDGSVKPFEVSKVQVERDFGAAIAARPPLPESFTLYFQRGS 561

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     +  V+ +I E+        I++ GHTD       A  N  L L RA +  + + 
Sbjct: 562 TELTAASKAVMSRIKELAKARKALDITVIGHTDTM---GTAESNEVLGLRRANAIAKQMQ 618

Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           + G+    I  +       L +A+  +     NRR +I V 
Sbjct: 619 QLGLRNTAII-VESNGERNLFVATPQNTNEPRNRRAEITVR 658


>gi|332664542|ref|YP_004447330.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333356|gb|AEE50457.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 226

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 19/194 (9%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
                   +               +++ K LA +   R+ +  +K   +L  +  D    
Sbjct: 39  SCKNQTPKEPVSPEEDPLGAIEDMVNETKALAKEEAARVDEKTQKALESLRSVKFDP--- 95

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI------- 266
                  +    I         +F   +   +PE   VL  +   L     ++       
Sbjct: 96  --ETVGEKLYQAILAGKDLKMEVFLFKTLNFVPEQADVLPAMKPELTQLANIMAAFPEFK 153

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
             I  HT           N  LS  RA S  + L K GV++ R+    G+          
Sbjct: 154 FQIAAHT---AGVGDHILNLTLSHHRATSIVEALEKMGVAKSRMKA-RGYGDELPIADHT 209

Query: 326 PMNSA--NRRIDIL 337
                  N+RI++ 
Sbjct: 210 MPEGREANQRIELT 223


>gi|15607090|ref|NP_214472.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5]
 gi|2984343|gb|AAC07863.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5]
          Length = 203

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S L   V     +          + I+  +Q     FD +      +    L ++ + + 
Sbjct: 69  SALESDVDSLRREHEEIRAEIEKLKITGKEQVR-VYFDSNKFTLRDDAKATLDELIDAVR 127

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               + + + G+ D    R     N+ LS+ RA +    L+K+G+  +++ +I+ +   
Sbjct: 128 DKDIKKVIVVGYADPRGTRG---YNFELSMKRAQNVAAYLIKNGIPVEKV-RIASYGEE 182


>gi|57168474|ref|ZP_00367608.1| chemotaxis motB protein, putative [Campylobacter coli RM2228]
 gi|305432893|ref|ZP_07402051.1| chemotaxis motB protein [Campylobacter coli JV20]
 gi|57020282|gb|EAL56956.1| chemotaxis motB protein, putative [Campylobacter coli RM2228]
 gi|304444047|gb|EFM36702.1| chemotaxis motB protein [Campylobacter coli JV20]
          Length = 243

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
          KK    + P     W + YADF+++L+A F+ +W I+ T+    +A++  F        T
Sbjct: 3  KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTAT 61

Query: 79 AS 80
           +
Sbjct: 62 QT 63



 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 11/188 (5%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             K     T+  K  +      +   +++       ++  +D   K+             
Sbjct: 42  PAKVEALKTEFVKIFDYTATQTVQQETQDTYKYKGSQEEKEDELSKLKQMAVNQQEVIKK 101

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIR 269
                + +    ++++  +     F++ S+  +   I    K    L           IR
Sbjct: 102 LQAALDQSENQEILNLPSKVE---FERGSAQIVSADIQDYLKRIAQLISYLPPQIEIEIR 158

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+TD S     +     L   RA +  + L++ GVS   I+ +  +  +     + P   
Sbjct: 159 GYTDNSDSALRSY---DLGYTRAENVLKYLIEGGVSTKNIN-LKSYGLNSPINGN-PQAL 213

Query: 330 ANRRIDIL 337
            N R+ I 
Sbjct: 214 ENNRVQIY 221


>gi|239504183|ref|ZP_04663493.1| small protein A (tmRNA-binding) [Acinetobacter baumannii AB900]
          Length = 259

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           I D+  + +F           E    + KI E +  S     I + G TD          
Sbjct: 141 IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 197

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334
           N  LS  RA +  ++L++ GV   RI +I   +           ++        + NRR+
Sbjct: 198 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSDNNSSQLIQCLAPNRRV 255

Query: 335 DI 336
           +I
Sbjct: 256 NI 257


>gi|85714482|ref|ZP_01045470.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
 gi|85698929|gb|EAQ36798.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
          Length = 318

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             +T  F+  S     +    LQ I + +        +EV  I GHTDA        DN 
Sbjct: 191 DLDTINFETGSWDIPDDQAAKLQVIADGINRAISRNPSEVFLIEGHTDAV---GNDVDNL 247

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
            LS  RA SA ++L +   V  + +    G+    LK+ +D  +  NRR+
Sbjct: 248 SLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKVQTDGPSRENRRV 296


>gi|224371704|ref|YP_002605868.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
 gi|223694421|gb|ACN17704.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
          Length = 196

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   +    E++ ++ ++   +       ISI GHTD    +  +  N +LSL+RA   
Sbjct: 95  FNTGDTSLTKESLDLIPEVLNSVKERAPSEISIIGHTDT---KGASVYNNKLSLERANKV 151

Query: 296 YQVLMKSGVSED-RISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
            +++    +  + +   I     +   +    +     NRR++I+V 
Sbjct: 152 AKIITH--IDANLKNIYIQFHGENDPLVITGDNVSEKRNRRVEIMVR 196


>gi|222086972|ref|YP_002545506.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
           K84]
 gi|221724420|gb|ACM27576.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
           K84]
          Length = 177

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +  + LA      I++ GH D          N  L   R
Sbjct: 68  DRIFFDTDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQG 343
           A +    L   GV   R+  IS +   R     D     S NRR  + V +  G
Sbjct: 125 AAATKDYLASRGVPAQRMKTIS-YGKERPVATCDDISCWSQNRRA-VTVLNGAG 176


>gi|38146954|gb|AAR11862.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
 gi|38146956|gb|AAR11863.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
 gi|38146958|gb|AAR11864.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
 gi|38146960|gb|AAR11865.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
 gi|38146962|gb|AAR11866.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
          Length = 141

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 7/102 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
               FD   +        +L+K+ +     T    +  GHTD          N  L   R
Sbjct: 42  EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSA 330
           A +    +++   S +    +             +S+P  + 
Sbjct: 99  ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAE 140


>gi|298482993|ref|ZP_07001174.1| outer membrane protein [Bacteroides sp. D22]
 gi|298270737|gb|EFI12317.1| outer membrane protein [Bacteroides sp. D22]
          Length = 397

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 6/129 (4%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISI-IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +   V   + + V  +     I+ ++  D      F+    +    +   L ++ E+L 
Sbjct: 247 EIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVITATSERTLDRLAELLK 306

Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
              +    I G+TDA   +     N  LS  RA   +  L+  GV   R+ K  G     
Sbjct: 307 SYPDSRFLITGYTDA---KGSDSYNLTLSARRAEKVHAALIGRGVPA-RMIKWRGVGKRA 362

Query: 320 LKIASDPMN 328
             I++   +
Sbjct: 363 AIISATAAD 371


>gi|260712903|ref|YP_003226958.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIB
           11163]
 gi|258553429|gb|ACV76374.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 273

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 45/187 (24%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            K +    ++   +   +   +    ++G+   T    +           +F        
Sbjct: 60  AKSENIRHNIIMHLVEAVRADIKKEKIEGLEVSTQGDALRFQ-----GNGLFASGQGGLS 114

Query: 246 PETIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARD 283
             ++ +++ +G  LA                             + GHTD+       ++
Sbjct: 115 GNSLRIIKLLGHHLADFMPCFAVGSKGAVALSCNPDLVMLETVQVEGHTDS---NGSHQN 171

Query: 284 NWRLSLDRAYSAYQ-------------VLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328
           N  LS  RA SA+              +L    +    I  ++G+   R    +      
Sbjct: 172 NLVLSTTRAISAFNEIVPDSKNNDMPEMLEFQNLLGQPIMAVAGYGEMRPVGNNATAVGR 231

Query: 329 SANRRID 335
           +ANRRID
Sbjct: 232 AANRRID 238


>gi|222475318|ref|YP_002563735.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
           str. Florida]
 gi|222419456|gb|ACM49479.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
           str. Florida]
          Length = 255

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD +          VL  + E +       + I GHTD+         N  L  
Sbjct: 59  RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDSR---GTEEYNLALGE 115

Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339
            RA +  + ++     +S    ++  G A    L  +SD       ++ NRR+ ++VE
Sbjct: 116 RRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 173


>gi|184157314|ref|YP_001845653.1| small protein A [Acinetobacter baumannii ACICU]
 gi|332876511|ref|ZP_08444276.1| OmpA family protein [Acinetobacter baumannii 6014059]
 gi|183208908|gb|ACC56306.1| Small protein A (tmRNA-binding) [Acinetobacter baumannii ACICU]
 gi|322507199|gb|ADX02653.1| small protein A (tmRNA-binding) [Acinetobacter baumannii 1656-2]
 gi|323517176|gb|ADX91557.1| small protein A (tmRNA-binding) [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332735280|gb|EGJ66342.1| OmpA family protein [Acinetobacter baumannii 6014059]
          Length = 259

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           I D+  + +F           E    + KI E +  S     I + G TD          
Sbjct: 141 IADRTASVLFAFERFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPL---GKFSY 197

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN-----SANRRID 335
           N  LS  RA +  ++L++ GV   RI +I   +   L      ++        + NRR++
Sbjct: 198 NQELSSKRANTVAKLLVRQGVEPSRI-QIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVN 256

Query: 336 I 336
           I
Sbjct: 257 I 257


>gi|53715321|ref|YP_101313.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
 gi|60683254|ref|YP_213398.1| putative major outer membrane protein [Bacteroides fragilis NCTC
           9343]
 gi|253567211|ref|ZP_04844661.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
 gi|265767807|ref|ZP_06095339.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
 gi|13446379|gb|AAK20932.1| major outer membrane protein OmpA [Bacteroides fragilis]
 gi|52218186|dbj|BAD50779.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
 gi|60494688|emb|CAH09489.1| putative major outer membrane protein [Bacteroides fragilis NCTC
           9343]
 gi|251944042|gb|EES84561.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
 gi|263252479|gb|EEZ24007.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
 gi|301164773|emb|CBW24332.1| putative major outer membrane protein [Bacteroides fragilis 638R]
          Length = 395

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    +I     ++++ D+A    S    LV                   +I    
Sbjct: 234 ARPMPQIISEIELANMRRQMNDMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 291

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F   SS   P   + L  +   +    +   ++ G+ D+         N  LS  R
Sbjct: 292 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 349

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +    L+K  GV   R+   +G  
Sbjct: 350 AQAVVNALVKKYGVDSSRLKVDAGGG 375


>gi|162450138|ref|YP_001612505.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161160720|emb|CAN92025.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 222

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 15/112 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288
           F+ +S +     +  L+   + ++               I GHTD       A  N  LS
Sbjct: 99  FETNSDVIRAPEVPKLEASLQKISEVVAKTSELGKITLFIVGHTDTV---GSAEHNLALS 155

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             RA +        GV         G       + +        NRR+D ++
Sbjct: 156 RKRARAIAAWFKGRGVKLS--IAFEGLGESAPLVKTADQVDEPRNRRVDYIL 205


>gi|269123146|ref|YP_003305723.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314472|gb|ACZ00846.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2073

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%)

Query: 161  TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
             +     N   N     L ++    + + K+L++   ++    +  + D I +       
Sbjct: 1894 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDRLRRE-NDRIGDEIKELRERIKA 1952

Query: 221  RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278
               I ++  D      +             +L  I   L  + +     I G+TD     
Sbjct: 1953 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2009

Query: 279  NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335
            +    N  L L RA    + L + G+     I K+S   ++ +   +   N    NRR++
Sbjct: 2010 SGENLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2069

Query: 336  ILVE 339
            I + 
Sbjct: 2070 IELR 2073


>gi|218533090|ref|YP_002423906.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|218525393|gb|ACK85978.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
          Length = 723

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              + +     +           +                   P +   +   +   ++ 
Sbjct: 497 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 556

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251
            + A   + +   +   +    +        +   +     NT  FD  S    P+    
Sbjct: 557 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 616

Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
           L  I E +  +      EV  I G+TDA        DN  LS  RA S   VL ++  V 
Sbjct: 617 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 673

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + ++   G+    LK+ +   N  NRR+ +
Sbjct: 674 PENLTT-QGYGEQYLKVNTQDANRENRRVTV 703


>gi|312127315|ref|YP_003992189.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777334|gb|ADQ06820.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 241

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           S ++     +    K      K +++L+ +       +  L+ +     +  +       
Sbjct: 38  SYSEILQAKIKEREKLTENLKKTEQKLESIVGIRKKIVEDLIKEFKNSKLSLKIDPQTGA 97

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASP 276
           I+  +     +F+ +S          LQ+                +   I I GHTD   
Sbjct: 98  ITFSES---VLFEYNSYNLTQNGKKFLQQFIPKYIGILLSPQNKDNISQIIIEGHTDNR- 153

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSE-------DRISKISGFAHHRLKIAS---DP 326
                  N  LS  RA+   + ++ +   +        +    +G +  +L   +   D 
Sbjct: 154 --GDYLYNLELSQKRAFEVVRYILSNQFPDFPQKQLLKKYITSNGRSFSQLIYKNGKVDQ 211

Query: 327 MNSANRRIDILVEDRQ 342
             S  RR++     ++
Sbjct: 212 DAS--RRVEFKFRLKE 225


>gi|291278841|ref|YP_003495676.1| hypothetical protein DEFDS_0426 [Deferribacter desulfuricans SSM1]
 gi|290753543|dbj|BAI79920.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 200

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYS 294
           F                     L    +V  I GHTD+ P +  N  R+N+ LS+ RA  
Sbjct: 96  FYFKKGEYRFNLDNETISFFRNLN-RDKVYYIYGHTDSLPVKPNNKYRNNYELSILRAEF 154

Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASD-PMNSANRRIDIL 337
             +++ K  G+  +  +KI GF      +++       NRR+++ 
Sbjct: 155 IKELIRKYSGIDSN--AKIVGFGAFFPLVSNGLQGAEKNRRVELY 197


>gi|269122961|ref|YP_003305538.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314287|gb|ACZ00661.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2091

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 9/184 (4%)

Query: 161  TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
             +     N   N     L ++    + + K+L++    +    +  + D I +       
Sbjct: 1912 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDILRRE-NDRIGDEIKELRERIKA 1970

Query: 221  RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278
               I ++  D      +             +L  I   L  + +     I G+TD     
Sbjct: 1971 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2027

Query: 279  NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335
            +    N  L L RA    + L + G+     I K+S   ++ +   +   N    NRR++
Sbjct: 2028 SGEDLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2087

Query: 336  ILVE 339
            I + 
Sbjct: 2088 IELR 2091


>gi|75676986|ref|YP_319407.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
 gi|74421856|gb|ABA06055.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
          Length = 663

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 18/252 (7%)

Query: 93  SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152
            +  +  +   +     +V+ + G   Q+ +       I  + N       +        
Sbjct: 402 GNDTRNIVVRQDGTQIITVNDRDGRMLQRIRRDPRGQEIVIIDNRHPGHGGRGGALAAGV 461

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISSTLSGLVADN 210
                  +              +PP            + + D  +A  + S       D 
Sbjct: 462 AAGIAAGAIGSYFVSLPPPQIGIPPDRYIVEAEGAPPEVIYDTLMAPPVESIQRPYTLDE 521

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-----EV 265
           +    +       I        +T  F+  S     +    LQ I + +         EV
Sbjct: 522 VRYSPMVRARMPSI------DLDTINFETGSWDISDDQAAKLQVIADGINRVVARNPGEV 575

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             I GHTDA        DN  LS  RA SA ++L +   V  + +    G+    LKI +
Sbjct: 576 FLIEGHTDAV---GNDVDNLSLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKIQT 631

Query: 325 DPMNSANRRIDI 336
           D  +  NRR+ +
Sbjct: 632 DGPSRENRRVTV 643


>gi|299141391|ref|ZP_07034528.1| outer membrane protein [Prevotella oris C735]
 gi|298577351|gb|EFI49220.1| outer membrane protein [Prevotella oris C735]
          Length = 425

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 13/188 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
               K               +     +P +    +L  +++    ++ K           
Sbjct: 245 EAGLKLTYSVGKKVKRTEALQPSEPNMPEVDALHVLPERKEGNESEMTKVTEQVEQSKTT 304

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VIS 267
           +  V  V      +  ++       T  F  +S+    +    +Q++  +L  + +  I 
Sbjct: 305 ERPVSEVSVAAAESVAIVDFP----TVYFAFNSARISSKEEAKMQQMLHLLQDNPKLNII 360

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + G  D          N RLS+ RA +    L   G++  RI    G      +  ++  
Sbjct: 361 VTGWCDTV---GSDAVNLRLSVRRAKALKTWLTTQGINAARIKTA-GKG----RDFNEKN 412

Query: 328 NSANRRID 335
            +  RR +
Sbjct: 413 AAKARRSE 420


>gi|307726644|ref|YP_003909857.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307587169|gb|ADN60566.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 357

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 18/167 (10%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A +R   +Q+  +K + +                      +   I  R   +F     
Sbjct: 189 ARAEQRLPDVQENLRKSAESALQCKHAAFAASAATPAAAPPTVSRTIALRADLLFRFDGG 248

Query: 243 I---PLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                LP     L ++   L   +    ++I G+TD          N RLSL RA +  +
Sbjct: 249 NDAAMLPAGRRELDEVARSLKTVSALRELAITGYTDRL---GENAHNQRLSLQRAQTVAR 305

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDI 336
            L   GV+      + G A  +                 + NRR++I
Sbjct: 306 YLRAHGVTSP--ISVRGLASAKPVTECRQTRRDELVRCLAPNRRVEI 350


>gi|327404032|ref|YP_004344870.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319540|gb|AEA44032.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 734

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289
                 FD +     P+  V L KI  ++     + I +  HTD       A  N  LS 
Sbjct: 615 DLKPIYFDLAKYDIRPDAAVELDKIVAIMNEFPTMVIELGSHTDCR---GTALKNLELSQ 671

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHH-------------RLKIASDPMNSANRRIDI 336
            RA ++   +        RI    G+                + K   +  +S NRR + 
Sbjct: 672 KRADASANYIKSKIKDPYRI-AGKGYGETKILNGCSCEGPKKQPKYT-EAQHSVNRRTEF 729

Query: 337 LV 338
           LV
Sbjct: 730 LV 731


>gi|325268738|ref|ZP_08135366.1| major outer membrane protein OmpA family protein [Prevotella
           multiformis DSM 16608]
 gi|324988906|gb|EGC20861.1| major outer membrane protein OmpA family protein [Prevotella
           multiformis DSM 16608]
          Length = 387

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 17/165 (10%)

Query: 182 KILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           + +  + +  L  L  K+      +  + D +      ETT   +   +++   +  F+ 
Sbjct: 234 EAINAQHQAALDALNAKLRDSEAENARLRDQLANQKPVETTSESVK-QLVNTPVSVFFNI 292

Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           + S+I   + +V +Q + +    +   + + G+ D+         N +LS  RA +    
Sbjct: 293 NKSTIASQKDLVNVQALAKYAKDNNNSLLVTGYADS--ATGTPAYNQKLSERRANTVANE 350

Query: 299 LMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340
           L+K GV   +I+ + G                 S NRR  + V +
Sbjct: 351 LVKMGVENSKITAV-GKGGVETLSPI-------SFNRRATVQVTE 387


>gi|255008700|ref|ZP_05280826.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313146435|ref|ZP_07808628.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135202|gb|EFR52562.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 399

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 8/121 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + I   +  +V   + K V      T +   I D  +   F     +   E+ + L KI 
Sbjct: 247 QYIDRPVDRIVERIVEKRVEVP---TVVESHICDLFDNIHFAFDKDVVTSESELTLDKIA 303

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L         I G+TDA         N  LS  RA + Y+ L+K  V    + K  G 
Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GGDNYNMDLSKRRAKAVYRALLKRQV-PQHMLKWRGV 359

Query: 316 A 316
            
Sbjct: 360 G 360


>gi|255008471|ref|ZP_05280597.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313146200|ref|ZP_07808393.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
 gi|313134967|gb|EFR52327.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
          Length = 372

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     +++   S L         +   T+  +    +       F  
Sbjct: 220 GSQVDQNAINEELNRYRSELAKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAIFFQI 279

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    + G+ D       A+ N +LS  RA + Y  
Sbjct: 280 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYAD--KATGSAKWNQKLSEARAQAVYDA 337

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 338 LIKEGVSKDQLELV-GFGGT 356


>gi|240141603|ref|YP_002966083.1| hypothetical protein MexAM1_META1p5204 [Methylobacterium extorquens
           AM1]
 gi|240011580|gb|ACS42806.1| Conserved hypothetical protein; putative OmpA family member
           [Methylobacterium extorquens AM1]
          Length = 729

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%)

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
              + +     +           +                   P +   +   +   ++ 
Sbjct: 503 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 562

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251
            + A   + +   +   +    +        +   +     NT  FD  S    P+    
Sbjct: 563 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 622

Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
           L  I E +  +      EV  I G+TDA        DN  LS  RA S   VL ++  V 
Sbjct: 623 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 679

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + ++   G+    LK+ +   N  NRR+ +
Sbjct: 680 PENLTT-QGYGEQYLKVNTQDANRENRRVTV 709


>gi|331699296|ref|YP_004335535.1| OmpA/MotB domain-containing protein [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953985|gb|AEA27682.1| OmpA/MotB domain protein [Pseudonocardia dioxanivorans CB1190]
          Length = 222

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 8/101 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S++        +  +G  L    +  + + GH   +P    A     LS  RA + 
Sbjct: 126 FAADSAVLDGAAAETVAGVGRWLVAHPDVRVRLTGHAADTP--GPAEVALALSQQRAQAV 183

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            + L  +GV   R+S   G           P  +A+RR++I
Sbjct: 184 AEALRANGVDPSRVSA-RGVGDADPL----PTPAASRRVEI 219


>gi|255035472|ref|YP_003086093.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254948228|gb|ACT92928.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 314

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F++S++     +   L KI   L+ +    I++  HTD        + N RL+ +RA   
Sbjct: 211 FEQSTTNLSKSSTKNLSKILNCLSENRSVKITLESHTDNV---GDLKKNLRLAEERAARI 267

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            Q L+ + +SE RI +            ++     S NRRI + V+ 
Sbjct: 268 RQYLVDNKISESRI-QCRILGPLLPLAPNNNEYNRSLNRRIVVKVQG 313


>gi|160894083|ref|ZP_02074861.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
 gi|156864116|gb|EDO57547.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
          Length = 251

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 28/202 (13%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +S    +S   E +     + +++ L   +++ L  +A   S  ++ L  +     +  +
Sbjct: 40  QSKSQYESKQAELDKQKEIIKEQEQLLKDQQEELDRIAGIRSDLVAALRDEFADSSLNVK 99

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIR 269
                  I+      + +FD + S    E    L++           E        I I 
Sbjct: 100 VDEKTGAITF---DASVLFDVADSDLKEEGKTFLKEFLPKYCKVLLDEKYRDYVSEIIIE 156

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSED-------RISKISGFAHHRL 320
           GHTD          N  LS  RA+S  +      +G+           +   +G ++   
Sbjct: 157 GHTDT---NGSYIYNLELSQHRAFSVAKYCLTESNGIISSTDVELLRSVLTANGKSYSNP 213

Query: 321 KIASDPM---NSANRRIDILVE 339
               D      ++ RR++IL  
Sbjct: 214 IYKEDGAVDLEAS-RRVEILFR 234


>gi|90412812|ref|ZP_01220812.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
 gi|90326171|gb|EAS42598.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
          Length = 319

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +              L ++ + L  + E    I G TD++     A  N ++S  RA + 
Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDST---GTAAINAKVSEARANAV 276

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            Q L+ +GV   R+  ++  A           +   R ++++++
Sbjct: 277 SQYLIDNGVDASRL-TVTSVADQNPLTDDSGKSLIERSVEVVIK 319


>gi|53712971|ref|YP_098963.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
 gi|60681183|ref|YP_211327.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|253563051|ref|ZP_04840508.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
 gi|265763068|ref|ZP_06091636.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
 gi|52215836|dbj|BAD48429.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
 gi|60492617|emb|CAH07389.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|251946827|gb|EES87109.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
 gi|263255676|gb|EEZ27022.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
 gi|301162672|emb|CBW22219.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 372

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     +++   S L         +   T+  +    +       F  
Sbjct: 220 GSQVDQNAINEELNRYRSELAKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAIFFQI 279

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    + G+ D       A+ N +LS  RA + Y  
Sbjct: 280 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYAD--KATGSAKWNQKLSEARAQAVYDA 337

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 338 LIKEGVSKDQLELV-GFGGT 356


>gi|83952036|ref|ZP_00960768.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius
           nubinhibens ISM]
 gi|83837042|gb|EAP76339.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius
           nubinhibens ISM]
          Length = 667

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 13/281 (4%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            +                + G     N  +R    + D  I+     N +  + G+    
Sbjct: 375 FEKFALGALGAVAVGTILNNGNKVLSNSGDRVVVERSDGEIEVLKDDNVLLRRPGAEVTT 434

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           +++            +        +      +   +          +         +++ 
Sbjct: 435 ERFSDGSVRETVTRANGVKVVTIKASNGQVLRRVRVMPDGQQIVLFDDTVTVEPVEVTEL 494

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFD 238
              + +  +  +   +++ + L+    D + +    +  R    +     + +     F 
Sbjct: 495 PRTSTRSIQLSELSEEELRAALAEKERDQLHRHYTLQQVREIRAVRDLVPVIELEAINFA 554

Query: 239 KSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             S+         L+ +G  +      +  EV  + GHTDA      A  N  LS  RA 
Sbjct: 555 TDSAAITASEAEELRALGLAMSELIERNPNEVFLVEGHTDAV---GSASYNLALSDRRAE 611

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           S    L +   V  + +  + G+    LKI +      NRR
Sbjct: 612 SVALALTEYFDVPPENMV-VQGYGEANLKIRTPGPERQNRR 651


>gi|309789305|ref|ZP_07683896.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
 gi|308922840|gb|EFP68356.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
          Length = 111

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%)

Query: 41  MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           MT +MAFFLVMW+I+ +       I +YF       +T    I + ++P      +    
Sbjct: 1   MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60

Query: 101 SIDEHITKNSVDLK 114
             + +   N  +LK
Sbjct: 61  QGEVNKQPNIEELK 74


>gi|218259639|ref|ZP_03475310.1| hypothetical protein PRABACTJOHN_00969 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224977|gb|EEC97627.1| hypothetical protein PRABACTJOHN_00969 [Parabacteroides johnsonii
           DSM 18315]
          Length = 386

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L DL  +I++  +     +       E       +      N   F  +S+       
Sbjct: 241 ALLNDLNGQINALRAENDELSKRPVSCPECEEVVTNVVNNYVDNVVYFRINSAKIDKNQQ 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308
           V +    + +  +   I + G+ D          N +LS  RA +  + L+ K G+S  +
Sbjct: 301 VSIFNTAQFMKDNNVPIKVIGYADKKTGTGS--YNMQLSEKRARAVAKELIDKYGISSSQ 358

Query: 309 ISKISGFAHH-RLKIASDPMNSANRRIDIL 337
           I  I       +    ++       R+ I+
Sbjct: 359 I-TIEWKGSDVQPYNENNWN-----RVVIM 382


>gi|118497351|ref|YP_898401.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
 gi|195536039|ref|ZP_03079046.1| outer membrane associated protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208779140|ref|ZP_03246486.1| outer membrane associated protein [Francisella novicida FTG]
 gi|118423257|gb|ABK89647.1| OmpA family protein [Francisella novicida U112]
 gi|194372516|gb|EDX27227.1| outer membrane associated protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208744940|gb|EDZ91238.1| outer membrane associated protein [Francisella novicida FTG]
          Length = 392

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF +          +  N+R++
Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381


>gi|149918662|ref|ZP_01907150.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
           SIR-1]
 gi|149820503|gb|EDM79917.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
           SIR-1]
          Length = 158

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 10/160 (6%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             +     +L+      +  +     D     +        I+ + +  R+   F   S+
Sbjct: 3   QPSAPIDGKLEPGELAATRPVEPGADDPENPMMGKLRIADNIVDACLLPRDEAYFAYDSA 62

Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
               +    L  + +             + GHTD          N  L L R+ +    L
Sbjct: 63  EVSDKAERTLTLLAQCFDTGPMRYQGLVVVGHTDPR---GSNEYNLDLGLQRSVAVKDYL 119

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
           +  GV   RI         R   + DP   S +R+++I +
Sbjct: 120 VDEGVEGGRIET-RSLGERR--ASDDPEDWSDDRKVEIKL 156


>gi|294786072|ref|ZP_06751357.1| outer membrane protein [Fusobacterium sp. 3_1_27]
 gi|294486294|gb|EFG33659.1| outer membrane protein [Fusobacterium sp. 3_1_27]
          Length = 70

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            RA S    L++ G+SEDRI  I      +    +      + NRR++  +  R+
Sbjct: 1   RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 55


>gi|256424845|ref|YP_003125498.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256039753|gb|ACU63297.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 295

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 13/202 (6%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +E      +  D                +      +++    + L    +S  S    D 
Sbjct: 95  NEGELSPVEHVDSLNRCVVISWQKSADNTSSMQQGVEKGAISRQLPATEASADSPDEMDA 154

Query: 211 IVKGVL--FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
           I        ++     ++         +F+   +I +P ++  +++  ++L+        
Sbjct: 155 IGSNTTGTIDSLHPNEILVKKFALQNILFEPDRAILMPPSVYTVEQTAKLLSAYNGYSFE 214

Query: 268 IRGH----TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           +RGH     D           + LS++RA    Q+L++ G+  D+I+   G  +  L   
Sbjct: 215 VRGHVNFTADLRVEPGTPP--FELSINRAKLVKQLLIQYGLPADKITA-RGMGNSELIYP 271

Query: 324 ---SDPMNSANRRIDILVEDRQ 342
              +      N R+++L+   +
Sbjct: 272 YPQNLEEKLKNMRVEVLIYKPK 293


>gi|146342457|ref|YP_001207505.1| hypothetical protein BRADO5616 [Bradyrhizobium sp. ORS278]
 gi|146195263|emb|CAL79288.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
           ORS278]
          Length = 411

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 20/242 (8%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
             D+        K       +    +  +  +  K     D      +  S  + ++I  
Sbjct: 172 PDDVDPTPVPFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEA 231

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--------TR 221
                    + E      R    + L       LS L   +    +              
Sbjct: 232 YNAGRY-KAALELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNS 290

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
             + I  + +  + +F              + KI    A +   + + GHT A+ +  + 
Sbjct: 291 DRLAIKFLFKPGSTLFYTD-PEVRAPYQAWIGKIARRTAANHVCLEVAGHTSATGYSGV- 348

Query: 282 RDNWRLSLDRAYSAYQVL--MKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDI 336
             N RLS+ RA      +     G+   R+   SG     + + +   DP ++ +RR+++
Sbjct: 349 --NDRLSVLRAAYVKDQILAEDKGL-AGRLIA-SGRGSREMIVGTGRDDPSDALDRRVEL 404

Query: 337 LV 338
            +
Sbjct: 405 RI 406


>gi|91777208|ref|YP_552416.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689868|gb|ABE33066.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 359

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 62/260 (23%), Gaps = 20/260 (7%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E   Q        E+    S       T    +    +      ++   ++  +      
Sbjct: 111 EAIGQAATITIGLENGAPLSAANPALRTVSTVRPDLWKIVNTIKADPAVAQCPQAQQPLA 170

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
             + +      D  +         LP +      + +R  + +   +  +S  +      
Sbjct: 171 CAEVELAQAGHDAWRRSFTNAEKRLPEVQDNLRQSAQRALQCKQALQAPASMSAPEQGSV 230

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270
                        +           M              +        A +   + I G
Sbjct: 231 AKPQQKITLKADSL-FRFNGGDEAAMLPAGKRQLDDVATGL------NNAPALHELKITG 283

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN- 328
           + D          N  LS+ RA +  + L   GVS        G       +        
Sbjct: 284 YADRL---GDKSYNLGLSMQRARTVERYLRAHGVSVP--ITAQGRGSANPLVDCRRTKRD 338

Query: 329 ------SANRRIDILVEDRQ 342
                 + NRR++I +   +
Sbjct: 339 ALVKCLAPNRRVEIELVAAR 358


>gi|329957332|ref|ZP_08297852.1| OmpA family protein [Bacteroides clarus YIT 12056]
 gi|328523045|gb|EGF50148.1| OmpA family protein [Bacteroides clarus YIT 12056]
          Length = 410

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 6/135 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P     +     ++++ ++A       S L A       + ET       +I     T  
Sbjct: 254 PQLISALELSAMQQQMAEMAAANQQLESALTAAQNRPVEVTETEVVVTDPNI--APRTVF 311

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P  ++ +  + + +        ++ G+ D+         N  LSL RA + 
Sbjct: 312 FKIGSAELSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 369

Query: 296 YQVLMK-SGVSEDRI 309
             VL+K  G+  +R+
Sbjct: 370 VDVLVKDYGIPANRL 384


>gi|319953635|ref|YP_004164902.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319422295|gb|ADV49404.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 642

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F K  S   P     L K+  V+ +  E+   +  HT++         N  LS DRA + 
Sbjct: 529 FSKGKSTITPAIAAELDKVAAVVVNFPEIQLKVESHTNSR---GSGASNLSLSQDRASAV 585

Query: 296 YQVLMKSGVSEDRISKISGFAH 317
            + L+  GVS + + +  G+  
Sbjct: 586 RKYLLSKGVSSENVVEYIGYGE 607


>gi|121998194|ref|YP_001002981.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
 gi|121589599|gb|ABM62179.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
          Length = 321

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSL 289
           R    F   S       +  +++    +  +     I   G+ D       A  N +L+ 
Sbjct: 214 RTEVYFATGSDDLTRNALDEIRRFVRAVEDNPHWGVILSIGYADTR---GSAEVNEQLAE 270

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----SANRRIDI 336
            RA +    L+  G+ EDRI         RL    D        + NRR+++
Sbjct: 271 ARASAVRDELVHLGLPEDRIEV-----EARLIDDEDAEQDIHELAGNRRVEL 317


>gi|90412653|ref|ZP_01220655.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
 gi|90326461|gb|EAS42873.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
          Length = 208

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +L  + +Q++   FD  +     +   +L  I   L    +  + + GH+D         
Sbjct: 82  LLAQLPEQKDVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGHSDD---AGSKE 138

Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           +N  LS +RA+S    +    G+ E+RI +I       L    +       NRR++++
Sbjct: 139 ENLVLSFERAFSVAIYISSVFGIEEERI-QIVALGDDELISNGNSEQERQLNRRVEVI 195


>gi|15965621|ref|NP_385974.1| hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
 gi|15074802|emb|CAC46447.1| Hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
          Length = 671

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
              E         + ++    +  Y LPP+     +        +D  +     LS    
Sbjct: 466 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 525

Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260
           + + +    +  R    +         +T  F   S+         ++ + E +      
Sbjct: 526 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 585

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
              E   I GHTDA       + N  LS +RA S   +L +  G+  + +    G+    
Sbjct: 586 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 641

Query: 320 LKIASDPMNSANRRIDI 336
           LKI +D     NRR+ I
Sbjct: 642 LKIRTDGPEQENRRVTI 658


>gi|212691276|ref|ZP_03299404.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855]
 gi|237726434|ref|ZP_04556915.1| major outer membrane protein OmpA [Bacteroides sp. D4]
 gi|265752003|ref|ZP_06087796.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
 gi|212286444|dbj|BAG82875.1| majour outer mambrane protein OmpA [Bacteroides vulgatus]
 gi|212666508|gb|EEB27080.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855]
 gi|229434960|gb|EEO45037.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4]
 gi|263236795|gb|EEZ22265.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
          Length = 357

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + I   +  +  + + + +    +   + I          F    +   PE +V +Q +
Sbjct: 228 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 278

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + +  +      I G  D       A  N  LS  RA + Y  L+  GV E ++ K++ 
Sbjct: 279 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 335

Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337
                     D M   N   R+ IL
Sbjct: 336 MGGT------DNMFGKNYLNRVVIL 354


>gi|254372716|ref|ZP_04988205.1| outer membrane associated protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570443|gb|EDN36097.1| outer membrane associated protein [Francisella novicida GA99-3549]
          Length = 393

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF +          +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 382


>gi|226323415|ref|ZP_03798933.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
 gi|225208099|gb|EEG90453.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
          Length = 539

 Score = 63.4 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 21/196 (10%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
            GK      D     N E +  L   +    ++      L++    +SS L G   +  +
Sbjct: 346 DGKWYPYVYDSTAYWNGELSDNLETDADVSSMSEDELGELKENQTAVSSGLMGAFKEQGL 405

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-------- 264
                + +   + +      N  +F    +    E    L +                  
Sbjct: 406 DSTKIDESTGTVQM-----DNNVLFAWDKADLSEEGKAYLDQFLAAYVPVISSAIEDGKV 460

Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKI 322
             I + G+TD+         N +LS +RA +     +K+G  E     ++ G   + L +
Sbjct: 461 STIVVEGYTDS---AGDEAYNLKLSQERAKTVADY-IKAGYPELTNAIEVVGNGANNLIL 516

Query: 323 ASD--PMNSANRRIDI 336
             +     +A+RR+++
Sbjct: 517 DGEGKEDAAASRRVEV 532


>gi|237712295|ref|ZP_04542776.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
 gi|229453616|gb|EEO59337.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
          Length = 368

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + I   +  +  + + + +    +   + I          F    +   PE +V +Q +
Sbjct: 239 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 289

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + +  +      I G  D       A  N  LS  RA + Y  L+  GV E ++ K++ 
Sbjct: 290 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 346

Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337
                     D M   N   R+ IL
Sbjct: 347 MGGT------DNMFGKNYLNRVVIL 365


>gi|222148525|ref|YP_002549482.1| OmpA family protein [Agrobacterium vitis S4]
 gi|221735511|gb|ACM36474.1| OmpA family protein [Agrobacterium vitis S4]
          Length = 880

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +         E   I GHTDA      A  N 
Sbjct: 759 DLDTVTFATGSADISMNQAGTLKKVADAIVRVLKDDPGETFLIEGHTDAV---GSAESNL 815

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL +  G+  + +    G+    LK+ +      NRR+ +
Sbjct: 816 VLSDRRAESVANVLTQVYGIPPENMIT-QGYGEQFLKVMTYGPEQQNRRVTV 866


>gi|212286442|dbj|BAG82874.1| majour outer mambrane protein OmpA [Bacteroides vulgatus]
          Length = 357

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + I   +  +  + + + +    +   + I          F    +   PE +V +Q +
Sbjct: 228 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 278

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + +  +      I G  D       A  N  LS  RA + Y  L+  GV E ++ K++ 
Sbjct: 279 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 335

Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337
                     D M   N   R+ IL
Sbjct: 336 MGGT------DNMFGKNYLNRVVIL 354


>gi|90578276|ref|ZP_01234087.1| probable peptidoglycan-associated lipoprotein precursor [Vibrio
           angustum S14]
 gi|90441362|gb|EAS66542.1| probable peptidoglycan-associated lipoprotein precursor [Vibrio
           angustum S14]
          Length = 174

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +S         ++  G          +I          FD             L    +
Sbjct: 19  CVSDRAIYADYGDLACGTTVIEAPAPAIIPSDQWPVAVYFDFDKHDLQMSEQSQLDLASK 78

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +L+ +      + G  D+      A+ N  L+L RA          G+   R+  +S  +
Sbjct: 79  ILSDNPRYRVAVIGSADSM---GGAKYNDNLALKRAKVVADYFFSKGIDRSRMVTLSSGS 135

Query: 317 HHRLKIASDPMNSA-NRRIDILVEDRQ 342
             +  ++ D   +  NRR  +++    
Sbjct: 136 REQFIVSKDREVNRVNRRAQLILLGAN 162


>gi|146298626|ref|YP_001193217.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146153044|gb|ABQ03898.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 376

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 5/151 (3%)

Query: 191 RLQDLAKKISST-LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           R+ DL  +I +     +V +  V        +  +   I D+  +  FD + + P+  + 
Sbjct: 229 RIADLENQIKNIPSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENST 288

Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             +  +   L  +      I G+ D       A  N +LS  RA +   +  K+G++  R
Sbjct: 289 AAIDVVLTYLRKNPSASLDIIGYADQV---GKAEYNEKLSNQRAENVKTIFEKAGIASSR 345

Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           ++ I   A   ++  S+      RR+   V+
Sbjct: 346 LNVIPAGADTSIQKDSEEARRLARRVTFKVK 376


>gi|154490277|ref|ZP_02030538.1| hypothetical protein PARMER_00509 [Parabacteroides merdae ATCC
           43184]
 gi|154089169|gb|EDN88213.1| hypothetical protein PARMER_00509 [Parabacteroides merdae ATCC
           43184]
          Length = 386

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             L DL  +I++  +     +       E       +      N   F  +S+       
Sbjct: 241 ALLNDLNGQINALRAENDELSKRPVSCPECEEVVTNVVNNYVDNVVYFRINSAKIDKNQQ 300

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308
           V +    + +  +   I + G+ D          N +LS  RA +  + L+ K G+S  +
Sbjct: 301 VSIFNTAQFMKENNVPIKVIGYADKKTGTGS--YNMQLSEKRARAVAKELIDKYGISSSQ 358

Query: 309 ISKISGFAHH-RLKIASDPMNSANRRIDIL 337
           I  I       +    ++       R+ I+
Sbjct: 359 I-TIEWKGSDVQPYNENNWN-----RVVIM 382


>gi|332291797|ref|YP_004430406.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169883|gb|AEE19138.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 292

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR----- 286
              +F  + S    ++   L+K+ + L    E+   I+GH            N +     
Sbjct: 176 KNILFKTNYSYIHGKSYNDLKKLAKYLKEHPEIIFKIQGHVCCV-DHGRDGINLKTGKRN 234

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           LS  RA   Y  L   GV++ R+ +  GF         DP      R++I V 
Sbjct: 235 LSEARAKFIYDYLADQGVAKKRM-RYQGFGSRFPL-GGDPSEDK--RVEIYVT 283



 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288
           D+ +   FD   S  +   +  L +    L     E ISI G+ D          N RLS
Sbjct: 23  DRTHETFFDTDKSALIKTELASLNRFIASLPKDKIEDISIYGYCDDR---GTDAYNKRLS 79

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAH---HRLKIASDP-MNSANRRIDILVEDRQ 342
            DRA +   + M  GV++  I    G       RL  A        NR+++I+V  +Q
Sbjct: 80  QDRANTIKDIFMLQGVADTIIKNSDGKGELLLTRLDDAGSEIQRKLNRKVEIIVSLKQ 137


>gi|328676839|gb|AEB27709.1| Outer membrane protein A precursor [Francisella cf. novicida Fx1]
          Length = 392

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEFDIYNQKLSEKRAQA 341

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF +          +  N+R++
Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381


>gi|301162664|emb|CBW22211.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 366

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 214 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 273

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    I G+ D       A+ N +LS  RA + Y  
Sbjct: 274 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 331

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 332 LIKEGVSKDQLELV-GFGGT 350


>gi|265763060|ref|ZP_06091628.1| outer membrane porin F [Bacteroides sp. 2_1_16]
 gi|263255668|gb|EEZ27014.1| outer membrane porin F [Bacteroides sp. 2_1_16]
          Length = 373

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    I G+ D       A+ N +LS  RA + Y  
Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357


>gi|253563059|ref|ZP_04840516.1| outer membrane porin F [Bacteroides sp. 3_2_5]
 gi|251946835|gb|EES87117.1| outer membrane porin F [Bacteroides sp. 3_2_5]
          Length = 373

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    I G+ D       A+ N +LS  RA + Y  
Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357


>gi|53712963|ref|YP_098955.1| outer membrane porin F [Bacteroides fragilis YCH46]
 gi|52215828|dbj|BAD48421.1| outer membrane porin F precursor [Bacteroides fragilis YCH46]
          Length = 373

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    I G+ D       A+ N +LS  RA + Y  
Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  + GF   
Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357


>gi|255690559|ref|ZP_05414234.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM
           17565]
 gi|260624020|gb|EEX46891.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM
           17565]
          Length = 395

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 4/105 (3%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272
            V  E T   ++        T  F   S    P+  + L  +   +  S      I G+ 
Sbjct: 274 PVEIEDTEEVVIADTNIAPRTVFFKIGSDKLSPQEEMNLSYLANKIKESPNTTYTINGYA 333

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
           D+         N +LSL+RA     +L+K  G+S DR+   +G  
Sbjct: 334 DS--ATGTPAFNQKLSLERAQVVKDLLVKKYGISADRLKVAAGGG 376


>gi|228470936|ref|ZP_04055781.1| outer membrane protein 40 [Porphyromonas uenonis 60-3]
 gi|228307333|gb|EEK16347.1| outer membrane protein 40 [Porphyromonas uenonis 60-3]
          Length = 388

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            N   F   S+      ++ +    E    +   I I G+ D       A+ N  LS  R
Sbjct: 286 ENVVAFRIGSAKIDKNQMINVYNSAEAAKANGGKIYIVGYADEQ--TGNAKINMSLSQRR 343

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDIL 337
           A +  + L+ K GV+ D I  I       +    ++       R+ I+
Sbjct: 344 AEAVKKALVNKYGVNPDNIV-IDYKGDTVQPFATNEWN-----RVAII 385


>gi|254374174|ref|ZP_04989656.1| outer membrane associated protein [Francisella novicida GA99-3548]
 gi|151571894|gb|EDN37548.1| outer membrane associated protein [Francisella novicida GA99-3548]
          Length = 393

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F    +    +    +      +   +   ++++G+       +     N +LS  RA +
Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEFDIYNQKLSEKRAQA 342

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
               + + G+  ++I    GF +          +  N+R++
Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 382


>gi|39997270|ref|NP_953221.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39984160|gb|AAR35548.1| OmpA domain protein, putative [Geobacter sulfurreducens PCA]
          Length = 199

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 10/133 (7%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
            +        + T   I    Q  +  FD  S        +    +   L     +  ++
Sbjct: 75  QLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGLLAGLTKQ-GMFGLK 133

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+T           N RLS+ RA     ++  +G +   +  + G               
Sbjct: 134 GYTCTI---GTDDYNERLSIRRANHVAGIMKSNGFN---VVTVEGKGKCCPV---STDKR 184

Query: 330 ANRRIDILVEDRQ 342
            NRR++I+   ++
Sbjct: 185 LNRRVEIVEHRKE 197


>gi|86130223|ref|ZP_01048823.1| type VI secretion system OmpA/MotB family protein [Dokdonia
           donghaensis MED134]
 gi|85818898|gb|EAQ40057.1| type VI secretion system OmpA/MotB family protein [Dokdonia
           donghaensis MED134]
          Length = 228

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318
            +  + ++I GHTD       ARDN+   L ++      L  + G+   +I+  S     
Sbjct: 150 NNPDKKVTILGHTDNV---GNARDNFSTGLKKSRQIKWYLTARRGIPRSKITATS-RGEE 205

Query: 319 RLKIASDP--MNSANRRIDILVE 339
               +++       N RI+I+V+
Sbjct: 206 EPIASNNTVSGRRQNNRIEIIVD 228


>gi|255014570|ref|ZP_05286696.1| hypothetical protein B2_11729 [Bacteroides sp. 2_1_7]
 gi|293373684|ref|ZP_06620031.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC
           3f]
 gi|292631339|gb|EFF49970.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC
           3f]
          Length = 231

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 19/212 (8%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K +     ++      + DL  S+       L     +     ++ + +     +I + L
Sbjct: 4   KRTEYESKDENAFALSTGDLMASLLFIFILLLMGALLQVQEKAEQDEEIVKRYDQIKTQL 63

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG------- 256
              +       +          + I  Q  + +FD+  S+  P+   +L           
Sbjct: 64  YIDLQQEFKDDLAVWRATIDSTLCIRFQEPSMLFDEGQSLLKPKFKNILDDFFPRYIAVL 123

Query: 257 --EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV---LMKSGVSE--DRI 309
             +    + E I I GHT++         N  LS DR  +  Q    LM   + E    +
Sbjct: 124 SRDEYRDNIEEIRIEGHTNS---NGGYYSNMELSQDRTRAVLQYCFSLMSDDLEEWLKGL 180

Query: 310 SKISGFAHHRLKIASDPMNSAN--RRIDILVE 339
              +G +   L +  +     +  RR++  V 
Sbjct: 181 VTANGLSSSHLILKMNGEEDKDLSRRVEFRVR 212


>gi|209549648|ref|YP_002281565.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535404|gb|ACI55339.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 742

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         L+K+ + +        +E   I GHTDA       + N 
Sbjct: 621 DLDTITFATGSADIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAV---GTDQSNL 677

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA S   VL    G+  + +    G+    LK+ +      NRR+ +
Sbjct: 678 VLSDQRAESVANVLSDVYGIPPENL-ATQGYGEQYLKVNTSGPEQENRRVTV 728


>gi|148244623|ref|YP_001219317.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326450|dbj|BAF61593.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 189

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
           D      F    +     +I  + K    + ++    + + GHTD          N  L 
Sbjct: 82  DVNFILYFSDDGTEINKTSIKQIIKHANFMRNNPTLKLRLEGHTDER---GTREYNLALG 138

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
            +RA +  ++L    +S  RI ++  F   +       +     NRR++ +
Sbjct: 139 ENRALNVKEILGLYDLS-SRI-EVISFGEEKPMTQQHDEDAWQKNRRVEFV 187


>gi|187921515|ref|YP_001890547.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187719953|gb|ACD21176.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 362

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 23/287 (8%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
            +A  Q +    +    A       +    +++   I L     ++  +  L+  ST + 
Sbjct: 84  FRAKAQCWINAAQQARQAGDHWGFVEEAVGQAAMITISLENGTSLSAVNSALRTVSTVRP 143

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                L      + +      C  +    +    +L ++       +  +     P +++
Sbjct: 144 D----LWKIANTIKSDPAIAQCPQAQPPLACAEVELMQAGHEAWRRSFSDAEERLPDAQD 199

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K+              +I  +    V+      V      +   I++             
Sbjct: 200 KLRQSAETALQCKQKVQIPVSAPVPVSA----PVTVAAANSPRKITLKADSLFSFNGGDD 255

Query: 242 SIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           +  LP     + ++   L        + I G+ D          N  LS+ RA +  + L
Sbjct: 256 AAILPAGKRQMNEVAVRLKKLPSVHELKITGYADRL---GDKSYNQGLSMQRARTVERYL 312

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
              GVS        G       +              + NRR++I +
Sbjct: 313 QSLGVSLP--MTAQGRGSANPLVDCRQSKGDVLTRCLAPNRRVEIEL 357


>gi|294140610|ref|YP_003556588.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293327079|dbj|BAJ01810.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 252

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 20/178 (11%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           + +  + +   L   +    L  +  + L  ++ +  S    L    + +         G
Sbjct: 77  DDTEMESQQLKLTEQASTINLLNEDNQSLAIISNQYESLQDELTELRLARQQKLTELELG 136

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           + I          F   SS         L ++  VL  S +  + + G+ D       + 
Sbjct: 137 LNIQ---------FKTGSSQLETHFQPQLDELASVLRISNDLRLDLMGYADRR---GEST 184

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDI 336
            N  LS  R       L+  GV E ++   S +       A       N    RR+ I
Sbjct: 185 YNQALSEQRVAEVKSYLLTKGVDEKKL-AASAYGASAPLTAEQSFE--NDFFDRRVTI 239


>gi|312114255|ref|YP_004011851.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219384|gb|ADP70752.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 213

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS 324
             I GHTDA         N  LS  RA +    L     V+ +R+    G     LK   
Sbjct: 126 FMIIGHTDAR---GGDGYNLGLSQRRANAVAARLRDFHAVAANRLVA-EGRGMRELKDPV 181

Query: 325 DPMNSANRRIDI 336
            P+   NRR+ I
Sbjct: 182 RPLGGINRRVQI 193


>gi|152982739|ref|YP_001354366.1| OmpA family protein [Janthinobacterium sp. Marseille]
 gi|151282816|gb|ABR91226.1| OmpA family protein [Janthinobacterium sp. Marseille]
          Length = 222

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 14/78 (17%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325
           ++I G+TD       AR N  LS  RA +    L K GV+ +   K++G    +     D
Sbjct: 141 MTITGYTD---LLGNARSNQALSEKRAAAVADYLKKKGVTVN--MKVTGVGASQPVKDCD 195

Query: 326 PMNSA---------NRRI 334
              +          NRR+
Sbjct: 196 SKLNRTKLVACLAPNRRV 213


>gi|313149586|ref|ZP_07811779.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138353|gb|EFR55713.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 395

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    +I     ++++ ++A    S    LV                   +I    
Sbjct: 234 ARPMPQIISEIELANMRRQMNEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 291

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F   SS   P   + L  +   +    +   ++ G+ D+         N  LS  R
Sbjct: 292 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 349

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +    L+K  GV   R+   +G  
Sbjct: 350 AQAVVNALVKKYGVDSSRLKVDAGGG 375


>gi|294784302|ref|ZP_06749596.1| outer membrane protein [Fusobacterium sp. 3_1_27]
 gi|294488058|gb|EFG35410.1| outer membrane protein [Fusobacterium sp. 3_1_27]
          Length = 71

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
            RA S    L++ G+SEDRI  I      +    +      + NRR++  +  R+
Sbjct: 2   RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 56


>gi|223041430|ref|ZP_03611633.1| lipoprotein Plp4 [Actinobacillus minor 202]
 gi|223017688|gb|EEF16095.1| lipoprotein Plp4 [Actinobacillus minor 202]
          Length = 294

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 13/113 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD        E +  +  + + L     + I + G+TD          N  LS  
Sbjct: 138 NSDFLFDFDKDSLTAEGVRTVNALADKLKSLPVKSIVVEGYTDRM---GTVEYNLDLSQR 194

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-----NRRIDI 336
           RA +    L + GV+ + ++ + G+           +   +      NRR+ +
Sbjct: 195 RANTVKAELQRLGVTTE-LNAV-GYGKANQVKHCDGNDQAAKDCLRPNRRVVV 245


>gi|163745061|ref|ZP_02152421.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
 gi|161381879|gb|EDQ06288.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
          Length = 519

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +  +++    A  I +         + +          +  S         F+ 
Sbjct: 362 DQTPEEIPVEEQGNRFANAIITAGIETPLGELQRMTATLVPMARLTTSFR-------FEA 414

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++   +Q++   L               S     AR N  ++L RA +  + +
Sbjct: 415 GSIRLDAQSRSNVQQLARALEQGQYDARRLMFVGFSDGEGAARANREIALRRAEAVQRAV 474

Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             + V+    RI  ++  F         D       NRR+++ V 
Sbjct: 475 SAAAVTANLSRIDLRVDAFGEAMPIACDDSEWGRQANRRVEVWVR 519


>gi|297184084|gb|ADI20203.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 863

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 35/147 (23%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284
           I +        FD + S    E+ V L  +  +L  +  +   +R HTD   +R+    N
Sbjct: 589 IEVPIVLPNVFFDLAQSELREESKVALDTVFSILQRNPTITIGLRSHTD---YRDTDAKN 645

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----------------ASDPM- 327
             LS  RA S    L++ G++ +R++ + G       +                 +    
Sbjct: 646 DVLSQARAQSCVDYLIQKGITAERLTAV-GMGEKEPFVISTEYKGYGVDKFKAGDNLTET 704

Query: 328 -------------NSANRRIDILVEDR 341
                        N  NRR D  V   
Sbjct: 705 FIKRLNKEDQEIANQINRRTDFKVLSD 731


>gi|255011749|ref|ZP_05283875.1| putative major outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 390

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
               P    +I     ++++ ++A    S    LV                   +I    
Sbjct: 229 ARPMPQIISEIELANMRRQMNEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 286

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F   SS   P   + L  +   +    +   ++ G+ D+         N  LS  R
Sbjct: 287 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 344

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316
           A +    L+K  GV   R+   +G  
Sbjct: 345 AQAVVNALVKKYGVDSSRLKVDAGGG 370


>gi|157367360|gb|ABV45540.1| outer membrane protein 18 [Helicobacter pylori]
          Length = 179

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 6/110 (5%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       +  FD             L +I +    +   + + G+TD       +  N 
Sbjct: 67  IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
            L + R  S    L+  GV +D I  IS F   + K A         NRR
Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRR 172


>gi|75907103|ref|YP_321399.1| OmpA/MotB protein [Anabaena variabilis ATCC 29413]
 gi|75700828|gb|ABA20504.1| OmpA/MotB [Anabaena variabilis ATCC 29413]
          Length = 597

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 15/119 (12%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIA 281
           +R    F + S   +P  +  L  +   +               I I GHT+ +      
Sbjct: 474 ERAIVFFPEGSQEIIPSELSKLNNLALAVKKLLAVAKYLEKDVYIQIIGHTNTT---GTE 530

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             N +LS  R+      L   G+S  ++ ++ G +  +             NRR+   V
Sbjct: 531 SRNAQLSEGRSQRVLSYLSSQGISTSQL-QVLGVSSSQPLQPELTDEGKKFNRRVSFKV 588


>gi|297192373|ref|ZP_06909771.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197723026|gb|EDY66934.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 203

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+    E    +  I   +   + + I + G TD            +LS +
Sbjct: 94  QAEVLFGKDSAELSGEATSRISAIAVEIKNQNAKKIRVFGFTDDL---GTEAHGDKLSKE 150

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           RA + + VL +   +E    +I G+       ++        NRR+++
Sbjct: 151 RADAVHSVLAQQLSAEGITYEIRGYGEDYPIASNTSEEGRRKNRRVEV 198


>gi|150396796|ref|YP_001327263.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150028311|gb|ABR60428.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
          Length = 720

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F   S+         ++K+ E +         E   I GHTDA       + N 
Sbjct: 600 DLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAV---GADQSNL 656

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS +RA S   +L +  GV  + +    G+    LKI +D     NRR+ I
Sbjct: 657 VLSDERAESVAVLLTEVYGVPAENLVT-QGYGERFLKIRTDGPEQENRRVTI 707


>gi|167626342|ref|YP_001676842.1| outer membrane associated protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596343|gb|ABZ86341.1| outer membrane associated protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 390

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294
           F   S+    +    +      + +S  + ++++G+       +     N +LS  RA +
Sbjct: 280 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGATGSEFEIYNQKLSERRAEA 339

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
               + + G+  D+I    GF +          ++ N+R+
Sbjct: 340 VADYMNQLGLDNDKIIT-KGFGYENTLDGIHKSDARNQRV 378


>gi|56416952|ref|YP_154026.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
 gi|254995132|ref|ZP_05277322.1| hypothetical protein AmarM_03987 [Anaplasma marginale str.
           Mississippi]
 gi|255003301|ref|ZP_05278265.1| hypothetical protein AmarPR_03517 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004426|ref|ZP_05279227.1| hypothetical protein AmarV_03742 [Anaplasma marginale str.
           Virginia]
 gi|56388184|gb|AAV86771.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
 gi|295243859|gb|ADF87315.1| peptidoglycan-associated lipoprotein precursor [Anaplasma
           marginale]
          Length = 236

 Score = 63.1 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD +          VL  + E +       + I GHTD+         N  L  
Sbjct: 40  RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDSR---GTEEYNLALGE 96

Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339
            RA +  + ++     +S    ++  G A    L  +SD       ++ NRR+ ++VE
Sbjct: 97  RRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 154


>gi|302037752|ref|YP_003798074.1| putative peptidoglycan-associated lipoprotein [Candidatus
           Nitrospira defluvii]
 gi|300605816|emb|CBK42149.1| putative Peptidoglycan-associated lipoprotein precursor [Candidatus
           Nitrospira defluvii]
          Length = 192

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292
             +FD    +   + +  ++   + L  +    + + G  D       +  N  L   RA
Sbjct: 87  DVLFDFDQYVLRDDALTAVEANAKRLKDNRITKVLLEGRCDEV---GTSEYNLVLGERRA 143

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340
            S  + L   G+++ ++  ++ +   R      +      NR +  +V++
Sbjct: 144 LSVKRYLESLGINQLQVD-VTSYGKDRPLCLQHNPVCWQKNRSVHFVVKE 192


>gi|256828231|ref|YP_003156959.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256577407|gb|ACU88543.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 585

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F+  +     +    L +I  ++         I + G++D+         N  +S  RA 
Sbjct: 484 FETGNLSLDEQGGRDLARIVAMMKEPKNSGKTIVLVGYSDSV---GAYASNLAVSRKRAE 540

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339
           +  +   K G+ +  +              +D       NRR++I ++
Sbjct: 541 AVAEAFRKRGLQDVVVLAA---GEEGAIERNDIRAGREKNRRVEIWLK 585


>gi|239833809|ref|ZP_04682137.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821872|gb|EEQ93441.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
           3301]
          Length = 765

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           F   S+         L+K+   +         E   I GHTDA       R N  LS  R
Sbjct: 651 FATGSAEVSMSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAV---GSDRSNLVLSDKR 707

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           A S   +L +   +  + +    G+    LKI +      NRR+ I
Sbjct: 708 AESVASLLTEVYDIPAENLVT-QGYGERFLKIRTQAAEQENRRVTI 752


>gi|332308253|ref|YP_004436104.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175582|gb|AEE24836.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 266

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 56/214 (26%), Gaps = 10/214 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           T+++   +  + N    +         +                S    +       +  
Sbjct: 26  TQSTEPAETKTQNDLVGFGSGALLGSAVGGPVGGVIGGIMGLFISNDVNNDNALAQAKSE 85

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           + + +   L        L    ++    +    ++++               +      I
Sbjct: 86  LKETKLQLLALQRGADALTPAGQQAEHKIRSYQTASIENPDRTAPQSTAAINSHAAITPI 145

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285
               Q     F   S +        L  I  ++    +  I++ G+ D       +  N 
Sbjct: 146 ETNIQ-----FRTGSHLVEGHYHRQLDLIAALIRQYPDLHITLAGYADER---GDSNYNQ 197

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            LS  RA S  + L K  V   ++     F   +
Sbjct: 198 ALSQQRAISVKRYLTKQQVPTAQLHT-ESFGETK 230


>gi|330966673|gb|EGH66933.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 301

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
                   G+ E +I  +           +
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263


>gi|257464878|ref|ZP_05629249.1| Plp4 [Actinobacillus minor 202]
 gi|257450538|gb|EEV24581.1| Plp4 [Actinobacillus minor 202]
          Length = 255

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 13/133 (9%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDA 274
                       + D     +FD  SS+   E    +  I   L       I+++G TD 
Sbjct: 128 WLPVDCLKAENKVFDLSADVLFDFDSSVLTEEGKREVSNIALKLRQQQATNITVKGWTDR 187

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSA--- 330
                    N  LS  RA +    L+ +G++     K  G     L    ++        
Sbjct: 188 L---GSDSYNLNLSQLRAEAVKTELLNNGLNIS--IKAQGKGKLDLVACHNEDYEELKQC 242

Query: 331 ---NRRIDILVED 340
              NR++++LV D
Sbjct: 243 LKPNRKVEVLVND 255


>gi|325851839|ref|ZP_08171004.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|327312557|ref|YP_004327994.1| OmpA family protein [Prevotella denticola F0289]
 gi|325484681|gb|EGC87594.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|326945377|gb|AEA21262.1| OmpA family protein [Prevotella denticola F0289]
          Length = 382

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 17/165 (10%)

Query: 182 KILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +  + +  L  L  K+      +  + D +      ETT   +   +++   +  F+ 
Sbjct: 229 DAINAQHQAALDALNAKLRDSEAENARLRDQLANQKPVETTSESVK-QLVNTPVSVFFNI 287

Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           + S+I   + +V +Q + +    +   + + G+ D+         N +LS  RA +    
Sbjct: 288 NKSTIASQKDLVNVQALAKYAKDNNNSLLVTGYADS--ATGTPAYNQKLSERRANTVANE 345

Query: 299 LMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340
           L+K GV  ++I+ + G                 S NRR  + V +
Sbjct: 346 LVKMGVENNKITAV-GKGGVETLSPI-------SFNRRATVQVTE 382


>gi|222081460|ref|YP_002540823.1| hypothetical protein Arad_7805 [Agrobacterium radiobacter K84]
 gi|221726139|gb|ACM29228.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 199

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S    P +   L  I + L H         I GH  A+      + N+ LS  RA 
Sbjct: 90  FQNDSVAIEPRSYRTLGLIADALHHPNLWAYKFLIVGHASAT---GGDKHNFELSSKRAD 146

Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  + L     V  +R+  + G   +    A+    + NRR+ + 
Sbjct: 147 AIKEALATTFAVDSERLYAV-GVGEYFPIDAAKADAADNRRVQLF 190


>gi|212219329|ref|YP_002306116.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
 gi|212013591|gb|ACJ20971.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
          Length = 212

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+    +    L+ +  ++    +  + +  +TD             L+  +A  
Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
               L   G++  R++   G+        +   +    NRR++I
Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200


>gi|209363772|ref|YP_001423789.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
 gi|212212032|ref|YP_002302968.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
 gi|207081705|gb|ABS76937.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
 gi|212010442|gb|ACJ17823.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
          Length = 212

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+    +    L+ +  ++    +  + +  +TD             L+  +A  
Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
               L   G++  R++   G+        +   +    NRR++I
Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200


>gi|215919216|ref|NP_820613.2| ompA family protein [Coxiella burnetii RSA 493]
 gi|206584100|gb|AAO91127.2| IcmN protein, OmpA family [Coxiella burnetii RSA 493]
          Length = 212

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+    +    L+ +  ++    +  + +  +TD             L+  +A  
Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
               L   G++  R++   G+        +   +    NRR++I
Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200


>gi|161830197|ref|YP_001597454.1| ompA family protein [Coxiella burnetii RSA 331]
 gi|164685809|ref|ZP_01945857.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165919482|ref|ZP_02219502.1| ompA family protein [Coxiella burnetii RSA 334]
 gi|161762064|gb|ABX77706.1| ompA family protein [Coxiella burnetii RSA 331]
 gi|164601325|gb|EAX33525.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165916897|gb|EDR35501.1| ompA family protein [Coxiella burnetii RSA 334]
          Length = 170

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F   S+    +    L+ +  ++    +  + +  +TD             L+  +A  
Sbjct: 59  LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 115

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
               L   G++  R++   G+        +   +    NRR++I
Sbjct: 116 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 158


>gi|125491378|gb|ABN43176.1| putative outer membrane protein A [Bordetella petrii]
          Length = 137

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +  +       I  GHTD+         N +LS  RA S
Sbjct: 62  FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 118

Query: 295 AYQVLMKSGVSED 307
               L+  GV   
Sbjct: 119 VKSYLVSKGVDPT 131


>gi|289640922|ref|ZP_06473092.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
 gi|289509237|gb|EFD30166.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
          Length = 394

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   SS       V L +I  VL  S   + + GH DA         N  LSL RA +A 
Sbjct: 292 FATDSSELTEADRVHLDRIAAVLRESELSVLLAGHADAR---GPGVLNETLSLARARAAA 348

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
             L   GVS D + + +GFA       +      +ANRR++I
Sbjct: 349 AYLADQGVSADHL-RAAGFASEHPVATNATEAGRAANRRVEI 389


>gi|317153138|ref|YP_004121186.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943389|gb|ADU62440.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 244

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 20/181 (11%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-------- 230
           S++     +    L  L   I    S   A+   + V     +                 
Sbjct: 63  SQQSADEAQAASALDPLIGLIGQLSSRAGANGSQETVRVADNQVLFRSRTDGVTVVREGQ 122

Query: 231 ------QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
                  R    F  + +   PE+   L +I EV+  S   + + G+       N A   
Sbjct: 123 GRIRVTLRGDLFFAVNEAGLAPESGQYLSEIAEVVRLSVGTVHVIGYASEDEGGNEAGTR 182

Query: 285 W--RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339
               LS  RA      LM    V   R+  I+G      ++        + NRR++I++ 
Sbjct: 183 QGFALSTGRATEVADQLMTRFKVDPRRVV-ITGRGRLHPELPGTTPANQAMNRRVEIVIT 241

Query: 340 D 340
           +
Sbjct: 242 N 242



 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 58/175 (33%), Gaps = 6/175 (3%)

Query: 29  NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLMTASKGIF 84
              +W + +AD M V+   F+V++I ++T  D K    +                     
Sbjct: 26  GANAWAVPWADLMMVMFVLFVVLFIYSSTHQDVKVLFSQQSADEAQAASALDPLIGLIGQ 85

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL--ENNIFYLSNSQQSEH 142
                    SQ  + ++ ++ + ++  D        + + +     +  F ++ +  +  
Sbjct: 86  LSSRAGANGSQETVRVADNQVLFRSRTDGVTVVREGQGRIRVTLRGDLFFAVNEAGLAPE 145

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
               L+  +E  +    +  +    +++E        +   L+  R   + D   
Sbjct: 146 SGQYLSEIAEVVRLSVGTVHVIGYASEDEGGNEAGTRQGFALSTGRATEVADQLM 200


>gi|146301157|ref|YP_001195748.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146155575|gb|ABQ06429.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 420

 Score = 62.7 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 8/169 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            L P +   +    + + +      +   L   +     K      T   +   I     
Sbjct: 257 DLEPNTIAGVAVNTKGQSIDTNQNGVPDELESYLDKTYEKKGSGTATNNTVEELINGGYV 316

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
              FD +SS P   ++  +  + + L ++      I G+ D          N  LS  RA
Sbjct: 317 NVYFDFNSSKPTNASLSGVDFLVKYLKNNPGKSADIIGYADEI---GKTSYNTELSRKRA 373

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILVE 339
            +  +V + +G+   R++ +           +    +    RR+   V+
Sbjct: 374 EAVKKVAVNAGIDASRLN-VIANGEDTSVNKN-SKEARQIVRRVTFQVK 420


>gi|330877334|gb|EGH11483.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 301

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
                   G+ E +I  +           +
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263


>gi|281423558|ref|ZP_06254471.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
           F0302]
 gi|281402378|gb|EFB33209.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
           F0302]
          Length = 425

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 13/203 (6%)

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           L +  +  +  N L     K               +     +P +    +   +++    
Sbjct: 230 LDHIPEQGYKTNLLRETGLKLTYSVGKKVKRTEALQPSEPNMPEVDDLHVQPERKEDNEP 289

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++ K           +  V  V      +   +       T  F  +S+    +    +Q
Sbjct: 290 EMTKVTEQIEQSKTTERSVSEVSVAAAESVATVDFP----TVYFAFNSARISSKEETKMQ 345

Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +I  +L  + +  I + G  D          N RLS+ RA +    L   G++  RI   
Sbjct: 346 QILHLLQDNPKLNIIVTGWCDTV---GSDAVNLRLSVRRAKALKTWLTTRGINAVRIKTA 402

Query: 313 SGFAHHRLKIASDPMNSANRRID 335
            G      +  ++   +  RR +
Sbjct: 403 -GKG----RDFNEKNAAKARRSE 420


>gi|255008463|ref|ZP_05280589.1| outer membrane porin F precursor [Bacteroides fragilis 3_1_12]
 gi|313146191|ref|ZP_07808384.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
 gi|313134958|gb|EFR52318.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
          Length = 373

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 221 GAQVDQSAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAVFFQI 280

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    + G+ D       A+ N +LS  RA + Y  
Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYADE--ATGSAKWNQKLSEARAQAVYDA 338

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  I GF   
Sbjct: 339 LIKEGVSKDQLELI-GFGGT 357


>gi|90408529|ref|ZP_01216686.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
 gi|90310348|gb|EAS38476.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
          Length = 176

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  +S+       +L    + L      + +I G+TD          N  L   RA S 
Sbjct: 76  FDYDTSVLKARYTKILDAHAKFLVDHPTKLLTIEGNTDER---GTPEYNIALGERRAMSV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322
              L   GV+  +IS +S +   +   
Sbjct: 133 STYLENMGVTSKQISIVS-YGEEKPVN 158


>gi|319794930|ref|YP_004156570.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315597393|gb|ADU38459.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 402

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 13/208 (6%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           +   +     D+   + L  ST L+++    E   +         A KR    Q L    
Sbjct: 194 TAETQPGQAADALYLERLPTSTVLQEATAAYEAGRMSEALGRYEAASKR-PDGQQLRIYS 252

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP------LPETIVVLQ 253
              L+               T   + +   +     +F   S+             + L+
Sbjct: 253 GLYLTQSQLGRTADAEKTFGTIARLGLETNNLSVKFLFKPGSTDFLGDPKISAAYPMWLR 312

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           +I    A     + + GHT  +        N RLSL RA S    L+       +  + S
Sbjct: 313 QIARQAAQIDSCVVVTGHTSRT---GSESVNERLSLQRAVSVKSKLVTEAPPLAKKLRES 369

Query: 314 GFAHHRLKI---ASDPMNSANRRIDILV 338
           G       +   A D  ++ +RR++  V
Sbjct: 370 GMGFRENIVGTGADDASDALDRRVEFKV 397


>gi|28871298|ref|NP_793917.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213970867|ref|ZP_03398990.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
           T1]
 gi|301384498|ref|ZP_07232916.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. tomato Max13]
 gi|302059911|ref|ZP_07251452.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. tomato K40]
 gi|302130510|ref|ZP_07256500.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28854548|gb|AAO57612.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924390|gb|EEB57962.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
           T1]
 gi|331015672|gb|EGH95728.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 301

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
                   G+ E +I  +           +
Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263


>gi|68637975|emb|CAI72626.1| putative outer membrane protein A [Bordetella petrii]
          Length = 138

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +  +       I  GHTD+         N +LS  RA S
Sbjct: 62  FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 118

Query: 295 AYQVLMKSGVSED 307
               L+  GV   
Sbjct: 119 VKSYLVSKGVDPT 131


>gi|254464865|ref|ZP_05078276.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
 gi|206685773|gb|EDZ46255.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
          Length = 517

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 14/156 (8%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++    A  I +       + + + V        +  S         F+  S+ P  ++ 
Sbjct: 370 RQGSRFANAILAAEGEAGLEELQRLVTVLGGMRRLTASFR-------FEPGSARPDAQSR 422

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK----SGVS 305
             ++++   L               S     A  N +++L RA +    ++K    + +S
Sbjct: 423 SNIEQLARALEAGEFDAKEIVFAGFSDGVGPAEGNRQIALKRAGAVRDAVVKAAETADIS 482

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RI +  GF         D       NRR+++ V 
Sbjct: 483 RVRI-RTEGFGEALPMACDDSAWGRQINRRVEVWVR 517


>gi|150024778|ref|YP_001295604.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771319|emb|CAL42788.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 283

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           N  +F  +S      +  ++  + + L  +    I I G+   +P  N      +LS  R
Sbjct: 175 NNILFQINSEKLANGSSQIIIDLLDYLTNNPKIKIEIHGNICCNPNTND----VKLSYRR 230

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDP--MNSANRRIDILVEDR 341
           A   +  L+K+G++  R+    G+                  ANRR++IL+ ++
Sbjct: 231 AKYIFDYLIKNGIATSRLG-YHGYGSANPIYKIPEKSYQEELANRRVEILIIEK 283



 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD + +   P T + L  +     +  E++ I G TD+         N  LS+ RA   +
Sbjct: 26  FDFNKTDINPTTKIKLDSLITS-KNKIEILKIYGFTDSVDTTT---YNDSLSIKRAKKIF 81

Query: 297 QVLMKSGVSEDRISKISGFAH--HRLKIASDPMNSANR 332
               ++ V      +I GF    ++ K ++      NR
Sbjct: 82  NYCKENKVQISNQVEIKGFGENYNQSKNSN-----KNR 114


>gi|85859515|ref|YP_461717.1| OmpA family outer membrane protein [Syntrophus aciditrophicus SB]
 gi|85722606|gb|ABC77549.1| outer membrane protein A protein family [Syntrophus aciditrophicus
           SB]
          Length = 226

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 12/105 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  +           L ++   L    +    + + GHT           N  LSL RA 
Sbjct: 129 FRFNRFDVSNYEKDQLDRLVSRLKERPDRPRELRVVGHTCDL---GSHPYNDHLSLMRAE 185

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           S    L ++G    ++S+  G            +   NRR++I +
Sbjct: 186 SVAVYLGRNGF---KVSEAKGEGKRSPVSK---VGKLNRRVEIEI 224


>gi|313887403|ref|ZP_07821093.1| outer membrane protein 40 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923171|gb|EFR33990.1| outer membrane protein 40 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 381

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 12/141 (8%)

Query: 201 STLSGLVADNIVKGVLFETTRTGIL--ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           S+L    A+   + V        +    ++    N   F   S+      ++ +    E 
Sbjct: 246 SSLRAQNAELSKRPVSCPECPDALAPATAVNVIENVVAFRIGSAKIDKNQMINVYNSAEA 305

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
           +  +   I I G+ D          N  LS  RA +    L+ + GV+ D I  I     
Sbjct: 306 VKANGGKIYIVGYADEQ--TGTPEINMSLSERRAEAVKNALINNYGVNPDNIV-IDFKGD 362

Query: 318 H-RLKIASDPMNSANRRIDIL 337
             +    ++       R+ I+
Sbjct: 363 TVQPFATNEWN-----RVAII 378


>gi|257093018|ref|YP_003166659.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045542|gb|ACV34730.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 566

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 19/122 (15%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNW 285
           I+ +  T  F   S+         +         +       + G+TD++        N 
Sbjct: 443 IVTKPVTVGFPSGSAELSKRAEKTVDSEMVPFIENNGKAYFEVSGNTDST---GSREVNQ 499

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS----------DPMNSANR-- 332
           RLS  RA +    L+K      +R   I G+   R               +   + NR  
Sbjct: 500 RLSAARARAVVDYLVKQWEFPRERFK-IVGYGPDRPLCNEVNAAIEGLSLEDCRAINRTT 558

Query: 333 RI 334
           R+
Sbjct: 559 RV 560


>gi|86361201|ref|YP_473088.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
 gi|86285303|gb|ABC94361.1| probable outer membrane lipoprotein [Rhizobium etli CFN 42]
          Length = 178

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I+       F + S+      +  L      L  +   +  ++G  D       A     
Sbjct: 62  ILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQGFADD---SGSAAQMQT 118

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 119 LSQKRADAAMAYLTSKGVDPKRMWA-KGYGNDREVRDC-TERSCKVQNRRV 167


>gi|329298438|ref|ZP_08255774.1| predicted outer membrane protein [Plautia stali symbiont]
          Length = 247

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 19/120 (15%)

Query: 236 MFDKSS---SIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +F   S   +    +    L     +L         I + G TD          N  L  
Sbjct: 133 LFRFGSANSNDISAQGREALSSFASMLKKENAAQRHIIVTGFTDPI---GSDSSNMALGQ 189

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341
            RA +   +L+  G++   I+        +    +   +        ++ RR+ I VE++
Sbjct: 190 RRAEAVKALLIAQGMNAANITA-QSMGESQ-VNTNCSGSLQEQKACYASERRVIISVENK 247


>gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2092

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 16/176 (9%)

Query: 169  KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
             E +     L ++    + +  +L +    +S  L       +   +            +
Sbjct: 1928 GELDGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKE-----LKDKISVIEKIKMNEDDL 1982

Query: 229  IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWR 286
                   +              +L  I   L  + +     I G+TD     +    N  
Sbjct: 1983 YTLDGYRL---GIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV---SGEDLNLE 2036

Query: 287  LSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            L L RA    + L + G+     I K+S   ++ +   +   N    NRR++I + 
Sbjct: 2037 LGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2092


>gi|149174963|ref|ZP_01853587.1| hypothetical protein PM8797T_11324 [Planctomyces maris DSM 8797]
 gi|148846300|gb|EDL60639.1| hypothetical protein PM8797T_11324 [Planctomyces maris DSM 8797]
          Length = 262

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA-TDDDTKKAIEQYFNPFGKNLMTASK 81
            DD P  +  W + Y D M++L+ FF+++  ++   +D+  +AI +    +         
Sbjct: 26  EDDAPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEIVNDEKYRAILESIQSYTGYRTGPIS 85

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
                        Q  +  +  +   +    +K  S   K 
Sbjct: 86  PPGKYFPMNSLVDQMSMLGAYTDSPDRGRGGIKTRSLEGKD 126



 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 3/80 (3%)

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM 300
                    L  +   LA     I +R HT   P    +   D   L+  R  +    L+
Sbjct: 152 DLDARRREKLDLMIPELAGKPNKIELRSHTSVKPLPADSPIHDKLILTYQRGRAVMLYLI 211

Query: 301 KSGVSEDRISKISGFAHHRL 320
           + G+   RI +I+  A    
Sbjct: 212 QKGIEPKRI-RITAAADSEP 230


>gi|126724638|ref|ZP_01740481.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126705802|gb|EBA04892.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 521

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 62/164 (37%), Gaps = 22/164 (13%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +RL +  + +++ +     D     + +        + +S         F   S+   
Sbjct: 367 DTQRLTEQGEILANAIEKPDNDIAEIRRYLDVVRGGKKLSVSFH-------FKSGSTDLD 419

Query: 246 PETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
            ++   L+++ +++       + +   GH+D      I   N  +S  R+ +  + + ++
Sbjct: 420 VQSSGNLERLAQIIEIGGMDGKELIFVGHSDGEGDAGI---NQSISNRRSNAVLRDIRRA 476

Query: 303 GVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVED 340
             S D +S++     GF         D       NRR+++ +++
Sbjct: 477 AKSAD-LSRVKLSGVGFGEVFPIACDDSEWGKRINRRVEVWIKE 519


>gi|146298734|ref|YP_001193325.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146153152|gb|ABQ04006.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 267

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            T  FD            V+    + +     E I I G+ D          N+RLS DR
Sbjct: 23  ETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDR---GTDDYNFRLSHDR 79

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP------MNSANRRIDILVEDRQ 342
             +   +L+ SG  E +I  + G    R+ +  D           NRR+D++V  R 
Sbjct: 80  VNTIQNLLVSSGFKESKIVILEGKG--RVVVRPDTVENLYETRLRNRRVDLIVVKRN 134



 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPF---RNIARDNWR-- 286
            + +FD  S+     +   L KI   +L        IRGH   +P      I +D     
Sbjct: 157 ESILFDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERR 216

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           LS +RA + +  L    VS++R+ +  G  +       D  +   RR++ L+  
Sbjct: 217 LSWNRAKNVFNYLSSKKVSKNRM-RYQGCGNKFPLRMGDNYD---RRVEFLITK 266


>gi|330957747|gb|EGH58007.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 301

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  I   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDAAAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
                   GV E +I  +           +
Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPN 263


>gi|60681175|ref|YP_211319.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|60492609|emb|CAH07381.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
          Length = 366

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             ++      + L     ++S   S L         +   T+  +    +       F  
Sbjct: 214 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 273

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S      +V +Q   ++L  + +    I G+ D       A+ N +LS  RA + Y  
Sbjct: 274 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 331

Query: 299 LMKSGVSEDRISKISGFAHH 318
           L+K GVS+D++  I GF   
Sbjct: 332 LIKEGVSKDQLELI-GFGGT 350


>gi|89069601|ref|ZP_01156940.1| OmpA family protein [Oceanicola granulosus HTCC2516]
 gi|89044799|gb|EAR50899.1| OmpA family protein [Oceanicola granulosus HTCC2516]
          Length = 176

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 11/139 (7%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
            +       +      +         I     N  +F   S          L +  +   
Sbjct: 43  AMDDGAEGYMSPHRTRDGRPVCHRSEICGVMPNEQLFATDSYRISHANKQRLAQFFQ--Q 100

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
            +     I GHTD          N RLS +RA +  +    +     RI  + GF+  + 
Sbjct: 101 ANAFGYLIYGHTDER---ASYEYNVRLSENRARAVAE---VAASVGARIVDVKGFSESQP 154

Query: 321 KI--ASDPMNSANRRIDIL 337
           +   ++      NRR++I 
Sbjct: 155 RAEGSNPAAWQQNRRVEIY 173


>gi|118594345|ref|ZP_01551692.1| outer membrane protein, porin-associated lipoprotein
           [Methylophilales bacterium HTCC2181]
 gi|118440123|gb|EAV46750.1| outer membrane protein, porin-associated lipoprotein
           [Methylophilales bacterium HTCC2181]
          Length = 179

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 11/108 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
            +  FD  S     +   V+      +      + + G+ D   +R     N  L   RA
Sbjct: 74  RSVYFDYDSFAIKSDFEGVISNHATFINKHDAAVVVYGNAD---YRGSHEYNLALGQKRA 130

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDI 336
            +  Q L   GV+   I  IS F       A+          +RR DI
Sbjct: 131 VAVKQALEALGVNGSAIETIS-FGEEH---ANQTCTGSTCGQDRRADI 174


>gi|56479209|ref|YP_160798.1| lipoprotein [Aromatoleum aromaticum EbN1]
 gi|56315252|emb|CAI09897.1| hypothetical protein, possible lipoprotein [Aromatoleum aromaticum
           EbN1]
          Length = 226

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 6/103 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S+         L    + L      I+I G TD++        N  L+L RA +  
Sbjct: 119 FALGSAKLSRAARSQLNAAMDDLLQVR-RITIIGRTDST---GPLAFNQDLALARALAVR 174

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
             L ++  +      +           +D     + NRR++++
Sbjct: 175 DHLRRTHPALAATLTLRARGACCFIAPNDTLAGRAQNRRVEVV 217


>gi|251771621|gb|EES52197.1| outer membrane protein, OmpA/MotB family [Leptospirillum
           ferrodiazotrophum]
          Length = 186

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 11/103 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S+   E   +L+K   +L     V  +  GH D          N  L   RA +A
Sbjct: 79  FGFDKSLLSSEDRGILKKDASILKAHPSVKVVIAGHADER---GTDAYNIVLGQKRAKAA 135

Query: 296 YQVLMKSGVSEDRISKISGFAHHR-LKIA-----SDPMNSANR 332
              L++ GVS  RI  +S +        +     ++   S NR
Sbjct: 136 RIYLIRLGVSAKRIKIVS-YGKREIPNYSVCSDHNESCWSKNR 177


>gi|110634419|ref|YP_674627.1| OmpA/MotB [Mesorhizobium sp. BNC1]
 gi|110285403|gb|ABG63462.1| OmpA/MotB [Chelativorans sp. BNC1]
          Length = 703

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  F+  S+      I  L+ +   +      +  E   I GHTDA         N 
Sbjct: 582 DLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAV---GSDVANL 638

Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA +  + L    G+  + +    G+    LKI +      NRR+ I
Sbjct: 639 ALSDRRADAVAEALSNVFGIPPENLVT-QGYGEQYLKINTQERERENRRVAI 689


>gi|71908258|ref|YP_285845.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847879|gb|AAZ47375.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 225

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S+   P     L ++   L  +   I+I G TD +        N  L+L RA +  
Sbjct: 118 FGLGSAKLSPAAHTSLNEVMTALLSAR-QITIIGRTDNT---GPLAFNESLALARALAVR 173

Query: 297 QVLMKSGVSEDRI---SKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             L+K      R+     +          A+D +     NRR++++
Sbjct: 174 DHLIKK---YPRLMPTLSVKARGACCFIAANDTLAGRTQNRRVELV 216


>gi|330955899|gb|EGH56159.1| OmpA/MotB [Pseudomonas syringae Cit 7]
          Length = 132

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           I GH D          N ++S +RA S   +   SG+  +R+S+  G      + A+D  
Sbjct: 4   ILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMPRAANDSL 59

Query: 327 -MNSANRRIDIL 337
              + NRR++IL
Sbjct: 60  QGRALNRRVEIL 71


>gi|302381877|ref|YP_003817700.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192505|gb|ADL00077.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 382

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD   S    E   V+ +            + + G+ D       A  N  LS 
Sbjct: 274 REFVVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADT---SGSAAYNVGLSN 330

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +    L+ +GV+   +  + G     L   +        NRR  I
Sbjct: 331 RRARTVADALVSNGVNGG-VIALDGKGETNLARPTADGVREPLNRRATI 378


>gi|218128457|ref|ZP_03457261.1| hypothetical protein BACEGG_00025 [Bacteroides eggerthii DSM 20697]
 gi|217989348|gb|EEC55661.1| hypothetical protein BACEGG_00025 [Bacteroides eggerthii DSM 20697]
          Length = 410

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P     +     ++++ ++A       S L A       + ET       +I     T  
Sbjct: 254 PQLISALELSAMQQQIAEMAAANQQLESALTAAQNRPVEVAETEVVVTDPNI--APRTVF 311

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+   P  ++ +  + + +        ++ G+ D+         N  LSL RA + 
Sbjct: 312 FNIGSAEVSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 369

Query: 296 YQVLMK-SGVSEDRI 309
             VL+K  G+S DR+
Sbjct: 370 VDVLVKDYGISADRL 384


>gi|117676216|ref|YP_863792.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
 gi|117615040|gb|ABK50493.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
          Length = 247

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 16/229 (6%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
           + +K +     +   Y  N       +  +   S          DL   + K  +  +  
Sbjct: 25  STEKPEISDCCSKTIYDQNINVRHQQRYDVRNLSADAGRKIGDLDLAFELEKARDAAVND 84

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM- 236
                +   +   R    +    S L         +    +       I I    +  + 
Sbjct: 85  GRSSMMNYYRDVYRAAVSSAYSDSYLPTQAPAANDEKRDLQQFNADAQIIIHQPTDRTLY 144

Query: 237 FDKSSSIPLP--ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F+  +       E   VL K  + L  +   + + G+ D       A  N  L   RA  
Sbjct: 145 FEYDAVGYSDIAEAQYVLAKHRDYLLKTHGRVLVVGYAD---ISGSADYNLALGRKRAER 201

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR--LKIASDPMNSAN----RRIDIL 337
               L+  GV  + +  +  +        ++       N    R++++ 
Sbjct: 202 VKNELVTKGVPSE-LISVVSYGASYSPPLMSGHTD---NLKLWRKVELY 246


>gi|94263332|ref|ZP_01287147.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456287|gb|EAT06417.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 272

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 21/112 (18%)

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQV 298
                +    L    E  A   E + I GHTD  P R+ +R   DNW LS  RA  AY+ 
Sbjct: 143 PCYTADPPAYLNCSPEH-AGKLESVFIEGHTDNVPLRDGSRKFQDNWDLSAQRAIFAYRS 201

Query: 299 LM------------KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
           ++             +G     I  +SG+   R +    +   ++ANRRID+
Sbjct: 202 MVIGEQPLLGQLTNTAGFP---IFSVSGYGEGRPRNRYEAPTADAANRRIDL 250


>gi|126699538|ref|YP_001088435.1| hypothetical protein CD1929 [Clostridium difficile 630]
 gi|255306922|ref|ZP_05351093.1| hypothetical protein CdifA_10067 [Clostridium difficile ATCC 43255]
 gi|115250975|emb|CAJ68804.1| putative membrane protein [Clostridium difficile]
          Length = 210

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           MFD  S +  PE   +L+           +        I I GHTD          N  L
Sbjct: 86  MFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142

Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           S  RAYS  + ++   + +          I  I G +   L     +     A+RR+++
Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200


>gi|254975524|ref|ZP_05271996.1| hypothetical protein CdifQC_09444 [Clostridium difficile QCD-66c26]
 gi|255092912|ref|ZP_05322390.1| hypothetical protein CdifC_09699 [Clostridium difficile CIP 107932]
 gi|255314653|ref|ZP_05356236.1| hypothetical protein CdifQCD-7_09900 [Clostridium difficile
           QCD-76w55]
 gi|255517327|ref|ZP_05385003.1| hypothetical protein CdifQCD-_09486 [Clostridium difficile
           QCD-97b34]
 gi|255650433|ref|ZP_05397335.1| hypothetical protein CdifQCD_09639 [Clostridium difficile
           QCD-37x79]
 gi|260683545|ref|YP_003214830.1| hypothetical protein CD196_1809 [Clostridium difficile CD196]
 gi|260687205|ref|YP_003218339.1| hypothetical protein CDR20291_1852 [Clostridium difficile R20291]
 gi|306520411|ref|ZP_07406758.1| hypothetical protein CdifQ_11096 [Clostridium difficile QCD-32g58]
 gi|260209708|emb|CBA63457.1| putative membrane protein [Clostridium difficile CD196]
 gi|260213222|emb|CBE04721.1| putative membrane protein [Clostridium difficile R20291]
          Length = 210

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           MFD  S +  PE   +L+           +        I I GHTD          N  L
Sbjct: 86  MFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142

Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           S  RAYS  + ++   + +          I  I G +   L     +     A+RR+++
Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200


>gi|85705706|ref|ZP_01036803.1| OmpA domain protein [Roseovarius sp. 217]
 gi|85669696|gb|EAQ24560.1| OmpA domain protein [Roseovarius sp. 217]
          Length = 523

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    ++   +    A  I+   + L  D + + V        +  +         F+ 
Sbjct: 366 DQTPEEIEINAQGDRFANAIAQAGAELGLDELQRMVRVLGPLKRLTTTFR-------FEA 418

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++    +++   +               S     A  N  ++L RA +  + +
Sbjct: 419 GSVRLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVRRAV 478

Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +++  +   +RI  ++  F         D       NRR+++ V 
Sbjct: 479 VRAAETANLERIKLELEAFGEAMPMACDDTAWGRQVNRRVEVWVR 523


>gi|84387079|ref|ZP_00990102.1| putative outer membrane protein [Vibrio splendidus 12B01]
 gi|84378154|gb|EAP95014.1| putative outer membrane protein [Vibrio splendidus 12B01]
          Length = 205

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
             +F  +S+   P  +  ++++   L       I ++G+         A+ N +LS +RA
Sbjct: 84  HILFANNSTEINPVFLGQIRQMAAFLKRYEGTSIELQGYASKV---GNAKHNLKLSKERA 140

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHR 319
               + L+ +G+   R++ I G     
Sbjct: 141 SHVRRALISNGIQPSRVN-IVGHGDSE 166


>gi|114706797|ref|ZP_01439697.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
 gi|114537745|gb|EAU40869.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
          Length = 176

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   F+  SS    +    LQ+  + L    +   ++ GH+D          N  L   R
Sbjct: 67  DRIFFETDSSAITADAQQTLQRQAQWLNQYPQYQITVEGHSDER---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +    L + GV+  R+  IS +   R      +    S NRR  + V    G
Sbjct: 124 AAATRDYLAQLGVNAGRMRTIS-YGKERPVAVCDNISCWSQNRRA-VTVLSGAG 175


>gi|153843472|ref|ZP_01993564.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810]
 gi|149745319|gb|EDM56570.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810]
          Length = 344

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           + S    L  +     +  E     I+I + ++     F + S+   P+   ++++I E+
Sbjct: 17  MESIKKALEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAEL 73

Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295
           +     ++ I GHTD     +   R NW LS  RA S 
Sbjct: 74  VKDVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSV 111


>gi|149918190|ref|ZP_01906682.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
 gi|149820950|gb|EDM80357.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
          Length = 780

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 75/297 (25%), Gaps = 26/297 (8%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
           +D K +     +             F     P   S    D S  E   +          
Sbjct: 486 EDAKVSFPGLASNVILTDANGMFTSFRFPEGPVSISVELPDGSFVEQTAEVRNGEDASVD 545

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD-----LEKSINKEENY 173
              +     +        +   E  + S+  D    ++   S +     +   + + +  
Sbjct: 546 VIAEVVAAEDPVFDGTFLNADGEGVQVSVALDGMGIQESFDSDENGRIAIALPMGEYKAT 605

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI------LIS 227
                   K +     +    + + + +  +         G       T +       + 
Sbjct: 606 LTAEGLPPKDITFSVTEEGAIVTETLGAESAEGGDAAAGGGAADPGMETPLISGNKYRVR 665

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNW 285
           +  +           +   ++   L ++   L        + +R HTD            
Sbjct: 666 VKKKPRY----SGGELNEDKSAEGLDQLAAFLLAHPEYGKVQVRVHTDDRGNPKKR---- 717

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
             S DRA +    L+K GV   R+    G+        +        N R +  V +
Sbjct: 718 --SQDRADAVVSYLVKKGVPAGRLEA-KGWGAKDPVAVNITSDGRRKNNRTEFRVRE 771


>gi|94497803|ref|ZP_01304369.1| probable outer membrane protein [Sphingomonas sp. SKA58]
 gi|94422692|gb|EAT07727.1| probable outer membrane protein [Sphingomonas sp. SKA58]
          Length = 215

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%)

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I++RGH+D+        DN   S  RA      L++ GV++DRI+ I+     R    
Sbjct: 110 GPITLRGHSDSR---GADGDNKVASAKRAELVRDYLVEKGVAKDRITLIA-IGEGRPVAP 165

Query: 324 S-------DPMN-SANRRIDILV 338
           +       DP   + NRR+D+ V
Sbjct: 166 NVREDGSDDPEGQAKNRRVDVTV 188


>gi|120556584|ref|YP_960935.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120326433|gb|ABM20748.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
          Length = 146

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 230 DQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           D+ +   F             I +L++    +     +   I GH D       A  N  
Sbjct: 31  DRPHRTRFHYGFNKHTLDAPDIDMLKRHAAYIKGHPGMQVRIHGHADNF---GSAEYNRF 87

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           L+  RA +  ++L++ GVS+  I   + +   R        ++ANRR+++
Sbjct: 88  LARLRANAVARLLIQEGVSQSSILLAT-WGSDRPL-TRPEDHAANRRVEL 135


>gi|89890270|ref|ZP_01201780.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
 gi|89517185|gb|EAS19842.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
          Length = 286

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 81/257 (31%), Gaps = 24/257 (9%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
           + D +I    +  +++ ++      K              S        +    S     
Sbjct: 36  ETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDRGSVSYNQQLATNRVQSVINYL 95

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGV 215
             + TD            L   S  K    + ++  +    K+       +V D+I K  
Sbjct: 96  KPRFTDNYFQQKIVGEVPLKNRSNIKAQRYRNRRVEISVTYKRTIDIPKAVVNDSIEKYR 155

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTD- 273
            ++  +  + I      N  +F     +    +  V+   I  +L H    I I+GH   
Sbjct: 156 SYDILKDSLQIGDKLVFNNVIFYPGRHVLRESSFPVMDSIINSLLLHKKYEIEIQGHICC 215

Query: 274 -ASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKI-------SGFAHHRLKIA 323
            +        D   W LS  RA    + L+K GV+ DR++ I       +G         
Sbjct: 216 LSPGVYGRDMDTGQWNLSKARAEQVKRFLVKYGVAADRLTTIGKQANFKTGKGDFY---- 271

Query: 324 SDPMNSANRRIDILVED 340
                  +RR++I +  
Sbjct: 272 -------DRRVEIHITG 281



 Score = 43.4 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 14/122 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
            +  +  +  F+  S+I   ++I  L+ ++          I++ G+ D          N 
Sbjct: 25  QVSTEELSIYFETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDR---GSVSYNQ 81

Query: 286 RLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
           +L+ +R  S    L         + +I          LK  S+       NRR++I V  
Sbjct: 82  QLATNRVQSVINYLKPRFTDNYFQQKIV-----GEVPLKNRSNIKAQRYRNRRVEISVTY 136

Query: 341 RQ 342
           ++
Sbjct: 137 KR 138


>gi|302384369|ref|YP_003820192.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302194997|gb|ADL02569.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 385

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD   S    E   V+ +            + + G+ D       A  N  LS 
Sbjct: 277 REFVVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADT---SGSAAYNVGLSN 333

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            RA +    L+ +GV+   +  + G     L   +        NRR  I
Sbjct: 334 RRARTVADALVSNGVNGG-VIALDGKGETNLARPTADGVREPLNRRATI 381


>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
 gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
          Length = 348

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 232 RNTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  MF   S+   PE    I  L +   +     +   + G++D +     A  N +LS
Sbjct: 229 KSDVMFGYDSAALTPEGKAAIAQLYRNPGLQPAKDKATVVIGYSDRT---GAADYNQQLS 285

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             RA +    L+  G+    I+   G     
Sbjct: 286 AQRAQAVADELVALGMPAANITA-QGHGSSD 315


>gi|162453377|ref|YP_001615744.1| hypothetical protein sce5101 [Sorangium cellulosum 'So ce 56']
 gi|161163959|emb|CAN95264.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 190

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRA 292
            F   SS PLP+  V L+ + + L  S+     I + G  D       A  N  LSL RA
Sbjct: 80  SFAFDSSEPLPQEHVELRALVDCLRSSSLEGARIELVGRADPR---GTAAYNQDLSLRRA 136

Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAH---HRLKIASDPMNSANRRIDILV 338
               ++L+K G+  DRI ++ +G +     +   +       +RR+D+ +
Sbjct: 137 ARVKEILVKEGIPADRITTRATGASEAVGAQPMYS----YGYDRRVDVAL 182


>gi|299133120|ref|ZP_07026315.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
 gi|298593257|gb|EFI53457.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
          Length = 345

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285
             +T  F+  S    P+    LQ I + +  + +        I GHTDA        DN 
Sbjct: 221 DLDTINFETGSWDISPDQAAKLQVIADGMNRAIQHNPQTVFLIEGHTDAV---GNDVDNL 277

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325
            LS  RA SA ++L +  GV  + ++   G+    LK+ SD
Sbjct: 278 SLSDRRAESAAELLTQQFGVPAENLTS-QGYGEQYLKVPSD 317


>gi|319783370|ref|YP_004142846.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169258|gb|ADV12796.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 185

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 9/161 (5%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFD 238
                A         + +K+ +     +  N    +     R  +          +  F 
Sbjct: 18  PSLAAAQATTPSAATIERKLEAAPRVKLRPNERVTIREFKRRPDLRRMARSIDIQSINFA 77

Query: 239 KSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             S+         ++ I + L           + I GHTDA       + N  LS  RA 
Sbjct: 78  FGSAAIANSQYDKIETIADALRRILRRDPGARVLIEGHTDAV---GSFQSNQALSEQRAA 134

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           S  + L++         +  G+    L + +   N  NRR+
Sbjct: 135 SLKRTLVREFRVPGHALETVGYGEEFLLVQTQNENWQNRRV 175


>gi|319781028|ref|YP_004140504.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166916|gb|ADV10454.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 168

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +  + L    +  I + GH D          N  L   R
Sbjct: 59  DRIFFDTDSTSIRADAQTTLSRQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GVS  R+  IS +   R           S NRR
Sbjct: 116 AAATRDFLVAKGVSASRLKTIS-YGKERPVAVCDDISCWSQNRR 158


>gi|255101058|ref|ZP_05330035.1| hypothetical protein CdifQCD-6_09624 [Clostridium difficile
           QCD-63q42]
          Length = 210

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           MFD  S +  PE   +L+           +        I I GHTD          N  L
Sbjct: 86  MFDIDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142

Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           S  RAYS  + ++   + +          I  I G +   L     +     A+RR+++
Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200


>gi|50084798|ref|YP_046308.1| putative antigen [Acinetobacter sp. ADP1]
 gi|49530774|emb|CAG68486.1| putative antigen [Acinetobacter sp. ADP1]
          Length = 281

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 17/141 (12%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIR 269
           + V+ +      +I++             +  LP     L+++   + +       I + 
Sbjct: 142 QPVIVKQKEQVDIINLSADALFKFNGSGLNDLLPRGHEELERLSNDIRNHYIAVSRIHLV 201

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK------IA 323
           GHTD          N+ L L RA +    L+K G+    I   S     +        I+
Sbjct: 202 GHTDRI---GSDSYNYNLGLKRAQTVKNYLVKDGIPAKTI-SFSSAGKSQPISNGCFDIS 257

Query: 324 SDPM----NSANRRIDILVED 340
           +          +RR+ + +  
Sbjct: 258 NMTSLKECLQVDRRVSVEITG 278


>gi|84502672|ref|ZP_01000791.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
           batsensis HTCC2597]
 gi|84389067|gb|EAQ01865.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
           batsensis HTCC2597]
          Length = 681

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 12/238 (5%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
              S               +        +   +     ++   +   + ++      TR 
Sbjct: 426 PDGSYKVYRNDDVLMFQPGTDVKTYAYDDGSTRTVATRDDGVTIETIRAADGTVLRRTRI 485

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
              G+++    D   S   E N           +  +  +  +  A   +     +    
Sbjct: 486 LPDGQEVVLFDDTRDSQEVEVNELPQVTDTRNRIDFQSAQEDELRAALQARAPEAVDRRF 545

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-----V 265
            +  V        ++  I    +   F+  S++  P     L ++G+++    E     +
Sbjct: 546 SLSQVRNINAVRQLVPEI--DVDNINFETGSAVIRPAEAEELARLGQLMRERIEENPGEI 603

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             I GHTDA         N  LS  RA S    L +   V  + +  I G+    LK+
Sbjct: 604 FLIEGHTDAV---GSGSYNLALSDRRAESVALALTEYFDVPPENMV-IQGYGETDLKV 657


>gi|319945287|ref|ZP_08019549.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
 gi|319741857|gb|EFV94282.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
          Length = 477

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 12/243 (4%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
           D+       +     +      + Q       +              +    ++  + L 
Sbjct: 243 DVVEVFGGAQTPAQGRETLELIRAQVPNGYRVLARDEAGAAGASRLAAAGAAAQGAQRLA 302

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
            +  L     + +                R  R    ++    T         ++ V   
Sbjct: 303 DANRLAGRDARAQADAQKAADARNAATKARDARNSRDSRNARDTRQAATDSRNLRTVAAG 362

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
           +       S+        F   SS   P     LQ++G  L   T  + + G+ D     
Sbjct: 363 SCPR----SLKQLSAPIFFKSGSSSLSPAETRRLQQLGACL-GRTAWVRVTGYADPRY-- 415

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRID 335
             A  N  LS  RA +    + + G S  RI  + G           A        RR+D
Sbjct: 416 -SAAYNKTLSERRARAVAGAISEGGFSSARI-TVVGAGKTSPRTKVRADKATLQRARRVD 473

Query: 336 ILV 338
           ILV
Sbjct: 474 ILV 476


>gi|182414999|ref|YP_001820065.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1]
 gi|177842213|gb|ACB76465.1| OmpA/MotB domain protein [Opitutus terrae PB90-1]
          Length = 197

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 7/116 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285
           SI        FD   S         LQK  + +    E   +  GH D       A  N 
Sbjct: 73  SIRGMFEPVYFDFDKSDIKQAERAKLQKAADYMKQHPEQRILLEGHCDWR---GTAEYNL 129

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVED 340
            L   RA +A + L       +RI  +S            D   + +RR+DI++  
Sbjct: 130 GLGDRRANAAKRYLSSL-APAERIETLS-KGSLDAAQNGDDAAMAKDRRVDIVILK 183


>gi|209883450|ref|YP_002287307.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
 gi|209871646|gb|ACI91442.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
          Length = 323

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285
             +T  F+  S    P+    LQ I + +  + +        I GHTDA        DN 
Sbjct: 199 DLDTINFETGSWDIPPDQAAKLQVIADGMNRAIQRNPQTVFLIEGHTDAV---GSDVDNL 255

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
            LS  RA SA ++L +  GV  + ++   G+    LK+A+D   
Sbjct: 256 SLSDRRAESAAELLTQQFGVPPENLTS-QGYGEQYLKVATDGAE 298


>gi|319902635|ref|YP_004162363.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319417666|gb|ADV44777.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 386

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII-DQRNTPMFDKSSSIPL 245
                +     +++ + + L                 ++  +         F   S+   
Sbjct: 240 ALNDEINRYRSELAQSQADLANAKNALANAKPAETKEVVKEVQVAGPRAIFFKIGSAKID 299

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
               V +Q   + L  +++    I G+ D       +  N +LS  RA + Y  L+  GV
Sbjct: 300 DYGKVNIQLAAKTLKGNSDRKYKIAGYCD--KATGSSSWNQKLSEKRAQAVYDALIAEGV 357

Query: 305 SEDRISKISGFAHHRLKIASDPMNSAN--RRIDIL 337
            +D++  + GF               N   R+ IL
Sbjct: 358 DKDQLELV-GFGGTENMF------GKNFLNRVVIL 385


>gi|301328313|ref|ZP_07221421.1| OmpA family protein [Escherichia coli MS 78-1]
 gi|300845245|gb|EFK73005.1| OmpA family protein [Escherichia coli MS 78-1]
          Length = 188

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            +    + L       GV    +   I++++    N   FD SS+   P     L  +  
Sbjct: 80  YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136

Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
           VL    +  +++ G+TD++        N RLS  RA S    L   GV   RI  
Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALTPQGVDASRIRT 188


>gi|322515359|ref|ZP_08068353.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
 gi|322118586|gb|EFX90814.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
          Length = 156

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   S    +    L  I + +  S  + ++I G+TD          N +LS +R
Sbjct: 57  GDFLFDFDKSNLTAKGKATLNNIAQEIKASGAKKVAITGYTDRL---GSPAYNQKLSQER 113

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           A SA   L+  GV   ++  + G        +       NRR+ I
Sbjct: 114 ANSAKAYLVNQGVKA-QMKAV-GRGEANQVKSCLKP---NRRVHI 153


>gi|237714325|ref|ZP_04544806.1| major outer membrane protein OmpA [Bacteroides sp. D1]
 gi|262408158|ref|ZP_06084705.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645116|ref|ZP_06722841.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|298480179|ref|ZP_06998377.1| major outer membrane protein OmpA [Bacteroides sp. D22]
 gi|229445489|gb|EEO51280.1| major outer membrane protein OmpA [Bacteroides sp. D1]
 gi|262353710|gb|EEZ02803.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639540|gb|EFF57833.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|298273460|gb|EFI15023.1| major outer membrane protein OmpA [Bacteroides sp. D22]
          Length = 395

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234
              + + I  ++  +    +    ++ +         +  +       ++I+       T
Sbjct: 235 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 294

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S    P+  + L  +   +  S     +I G+ D+         N +LSL+RA 
Sbjct: 295 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 352

Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316
               +L+K  G+S DR+   +G  
Sbjct: 353 VVKDLLVKKYGISADRLKVAAGGG 376


>gi|163815615|ref|ZP_02206988.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
 gi|158449252|gb|EDP26247.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
          Length = 251

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 26/198 (13%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +S    +S  ++ +     ++ ++ +  +++K L  +A   S  +  L  +     +  +
Sbjct: 40  QSKRQYESKQEQLDEQKKIIADQEKMLGEQQKELDRIAGIRSDLVKALRDEFSGSSLNVK 99

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIR 269
                  I+        +FD S S    +    + +           +        I I 
Sbjct: 100 IDEKTGAITF---DAGVLFDVSDSELKEDGKKFINQFLPKYCSVLLSDDYRDYVSEIIIE 156

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGV----SEDRISKI---SGFAHHRL 320
           GHTD          N  LS  RA+S  +      +G+     E+++  +   +G ++   
Sbjct: 157 GHTDT---NGSYIYNLELSQQRAFSVARYCLTESNGIISSGQEEQLRTVLTANGKSYSNP 213

Query: 321 KIASDPM--NSANRRIDI 336
               D      A+RR++I
Sbjct: 214 IYGDDGEVDMDASRRVEI 231


>gi|54302595|ref|YP_132588.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
 gi|46916019|emb|CAG22788.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
          Length = 208

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 8/118 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +L  + +Q+    FD  +     +   +L  I   L    +  + + GH+D         
Sbjct: 82  LLAQLPEQKEVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGHSDD---AGSKE 138

Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
           +N  LS +RA+S    +    G+ E+RI +I       L    +       NRR++++
Sbjct: 139 ENLVLSFERAFSVAIYISSVFGIEEERI-QIVALGDDELISNGNSEQERRLNRRVEVI 195


>gi|294809732|ref|ZP_06768419.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|294443066|gb|EFG11846.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 390

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234
              + + I  ++  +    +    ++ +         +  +       ++I+       T
Sbjct: 230 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 289

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S    P+  + L  +   +  S     +I G+ D+         N +LSL+RA 
Sbjct: 290 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 347

Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316
               +L+K  G+S DR+   +G  
Sbjct: 348 VVKDLLVKKYGISADRLKVAAGGG 371


>gi|295088071|emb|CBK69594.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Bacteroides xylanisolvens XB1A]
          Length = 395

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234
              + + I  ++  +    +    ++ +         +  +       ++I+       T
Sbjct: 235 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 294

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S    P+  + L  +   +  S     +I G+ D+         N +LSL+RA 
Sbjct: 295 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 352

Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316
               +L+K  G+S DR+   +G  
Sbjct: 353 VVKDLLVKKYGISADRLKVAAGGG 376


>gi|259417565|ref|ZP_05741484.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
 gi|259346471|gb|EEW58285.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
          Length = 517

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +  + + + L+  I S    +    + + +        +  S         F+ 
Sbjct: 360 DQAPEYIPMRMQGERLSNAIKSAGDDIPLGELKRMISGLDGLQRLTTSFR-------FEA 412

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            SS P  ++   +  I   L               S     A  N  ++L RA S  + +
Sbjct: 413 GSSRPDAQSRNNIDLIARELEAGVYDGKRMVFVGFSDGEGPAEGNRAIALKRAESVRRAV 472

Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
            ++  +   DRI+ + + +         D       NRR+++ V 
Sbjct: 473 ERAAETANLDRITIETAAYGEALPIACDDSAWGRQANRRVEVWVR 517


>gi|29346911|ref|NP_810414.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338809|gb|AAO76608.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 363

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V +      + E  +    + I   +    F  +S+    +    +  + E L  + 
Sbjct: 233 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNA 292

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321
              +S+ G+ D       AR N +LS  RA +  + L   G++ DRI  ++      +  
Sbjct: 293 TAKVSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY 349

Query: 322 IASDPMNSANRRIDILV 338
             + P      R+ I +
Sbjct: 350 --NTPEE---NRVSICI 361


>gi|255655882|ref|ZP_05401291.1| hypothetical protein CdifQCD-2_09334 [Clostridium difficile
           QCD-23m63]
 gi|296450696|ref|ZP_06892449.1| conserved hypothetical protein [Clostridium difficile NAP08]
 gi|296879187|ref|ZP_06903182.1| conserved hypothetical protein [Clostridium difficile NAP07]
 gi|296260540|gb|EFH07382.1| conserved hypothetical protein [Clostridium difficile NAP08]
 gi|296429730|gb|EFH15582.1| conserved hypothetical protein [Clostridium difficile NAP07]
          Length = 210

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           MFD  S +  PE   +L+           +        I I GHTD          N  L
Sbjct: 86  MFDIDSDVLKPEAKEMLKMFVPKYMETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142

Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336
           S  RAYS  + ++   + +          I  I G +   L     +     A+RR+++
Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200


>gi|149189863|ref|ZP_01868143.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           shilonii AK1]
 gi|148836349|gb|EDL53306.1| putative sodium-type flagellar protein MotY precursor [Vibrio
           shilonii AK1]
          Length = 334

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 8/99 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           FD    +   E    LQ +   +     +  +   GHTD       +  N ++S  RA  
Sbjct: 214 FDFGQRVVTSEQRQTLQSLASYIKADGHISKVLVDGHTDNV---GSSLSNLQVSRVRADD 270

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331
              VL + G +  ++ ++          +++     + N
Sbjct: 271 VASVLTELG-TPAKLIEVRAHGARYPVSSNETEFGQAKN 308


>gi|119468930|ref|ZP_01611955.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
 gi|119447582|gb|EAW28849.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
          Length = 244

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 18/230 (7%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
            G +          +     +          ++      G            +  +    
Sbjct: 12  AGFSAPTFSSASEHSPSKEATQETAIGLGTGAIIGGVVGGPIGAFIGAFAGGLIGDAKVA 71

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
              L +++      K++  D    ++        + + + +     +   L         
Sbjct: 72  DNKLDEQQRALAVMKQKTNDYQHVLN------HNNLLEQQLEVLAQQNEQLTQSQINNLL 125

Query: 235 PM---FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            M   F   SS   P     L ++  +L +  +  + + G  D        + N+ LS  
Sbjct: 126 AMTVQFKTGSSTIAPHFAKQLDQLVVLLNNQPQLALDLSGFADQR---GDEQANFLLSKK 182

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337
           R  +    L+K GVS  R+S    F        S+ +   N   RR+ + 
Sbjct: 183 RVNAVQSYLIKHGVSHKRLST-QAFGEQHTLANSNTIED-NFFDRRVTLT 230


>gi|328676441|gb|AEB27311.1| 18K peptidoglycan-associated outer membrane lipoprotein;
           Peptidoglycan-associated lipoprotein precursor; Outer
           membrane protein P6; OmpA/MotB precursor [Francisella
           cf. novicida Fx1]
          Length = 207

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|328675516|gb|AEB28191.1| 18K peptidoglycan-associated outer membrane lipoprotein;
           Peptidoglycan-associated lipoprotein precursor; Outer
           membrane protein P6; OmpA/MotB precursor [Francisella
           cf. novicida 3523]
          Length = 209

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|282159136|gb|ADA78527.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 206

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 69  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160


>gi|208780419|ref|ZP_03247760.1| OmpA family protein [Francisella novicida FTG]
 gi|208743787|gb|EDZ90090.1| OmpA family protein [Francisella novicida FTG]
          Length = 201

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 64  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 120

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 121 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 155


>gi|187931257|ref|YP_001891241.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712166|gb|ACD30463.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 207

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|254373811|ref|ZP_04989294.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
 gi|151571532|gb|EDN37186.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
          Length = 207

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|134302256|ref|YP_001122225.1| OmpA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|254369037|ref|ZP_04985050.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|134050033|gb|ABO47104.1| OmpA family protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|157121958|gb|EDO66128.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 207

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|56707951|ref|YP_169847.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670422|ref|YP_666979.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118496967|ref|YP_898017.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
           tularensis subsp. novicida U112]
 gi|194324196|ref|ZP_03057970.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
 gi|224457032|ref|ZP_03665505.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|254370440|ref|ZP_04986445.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254372337|ref|ZP_04987828.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254874755|ref|ZP_05247465.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604443|emb|CAG45475.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320755|emb|CAL08858.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118422873|gb|ABK89263.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
           novicida U112]
 gi|151568683|gb|EDN34337.1| hypothetical protein FTBG_00207 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151570066|gb|EDN35720.1| peptidoglycan-associated lipoprotein [Francisella novicida
           GA99-3549]
 gi|194321643|gb|EDX19127.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
 gi|254840754|gb|EET19190.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 207

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|262199615|ref|YP_003270824.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262082962|gb|ACY18931.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 342

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 10/209 (4%)

Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196
            Q        L  D +      +       +   + +       +      +   + D  
Sbjct: 130 GQPEAPPPARLAPDRDDDGVADEDDACPDRMEDIDGFEDLDGCPDIDDDRDQVLDIADGC 189

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           +     ++G    +    VL        L+ ++      +F +S       +  V+  + 
Sbjct: 190 RLAPENINGYRDGDGCPDVLPPE-----LVELVPAPRALLFRRSGDALRTRSEAVVDHLA 244

Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           ++L     V  +  GH D     +   D    LSL RA +  + L++ GVS  R+     
Sbjct: 245 DLLERHPSVRIVIVGHVDPGELDDEDADAEHTLSLRRAETVREALIRRGVSVRRLEVWDA 304

Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341
            A              + NRR+ + V   
Sbjct: 305 AAEF-PLSEGSSSHERARNRRVTVRVLRP 332


>gi|317475717|ref|ZP_07934976.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908100|gb|EFV29795.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 391

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
           P     +     ++++ ++A       S L A       + ET       +I     T  
Sbjct: 235 PQLISALELSAMQQQIAEMAAANQQLESALTAAQNRPVEVAETEVVVTDPNI--APRTVF 292

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+   P  ++ +  + + +        ++ G+ D+         N  LSL RA + 
Sbjct: 293 FNIGSAEVSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 350

Query: 296 YQVLMK-SGVSEDRI 309
             VL+K  G+S DR+
Sbjct: 351 VDVLVKDYGISADRL 365


>gi|237743864|ref|ZP_04574345.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229432895|gb|EEO43107.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 232

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 24/172 (13%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               K+++ ++       + +S +  D   +G+  +       I I D+    +F+    
Sbjct: 46  QELRKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDLDPQTGTIKIDDK---ILFNTGEY 102

Query: 243 IPLPETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  PE    L +            E +      I I GHTD          N  LS  RA
Sbjct: 103 LLKPEGKKYLNEFVPIYINLLLNDEQVKKELSQIIIEGHTDDV---GSYIYNMELSQKRA 159

Query: 293 YSAYQVLMK-----SGVSE-DRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
           +   + +        G  E  R    +G ++ ++   +  +     +RR++ 
Sbjct: 160 FEVIKYIYDEMPNFKGKEELKRYITANGRSNIKVLRDNSGNIDRDKSRRVEF 211


>gi|226358108|ref|YP_002787847.1| OmpA family protein [Deinococcus deserti VCD115]
 gi|226319751|gb|ACO47745.1| putative OmpA family protein [Deinococcus deserti VCD115]
          Length = 200

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 8/160 (5%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            A   + R +     ++  +           +L                +  MF   +++
Sbjct: 39  QAGWEQVRYRKAQDAVAQAVRKARLPARPLLLLPGQRNDPPGAQRWVFSSQRMFVGDTAV 98

Query: 244 PLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL- 299
             PE    L     VL    +      I GHT  S      R  W LS  RA +  +   
Sbjct: 99  LTPEGQSALVAFARVLRAQGKHWKRVRIEGHTQTSRPNTPER--WGLSAGRASAVAEAFY 156

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           +K GVS +R+  ++              +  N R++ILVE
Sbjct: 157 LKGGVSPNRL-AVAARGGQTP-YDGRKFDVRNERVEILVE 194


>gi|167626685|ref|YP_001677185.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|167596686|gb|ABZ86684.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 209

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 26/131 (19%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------------SDP------M 327
           L   RA + Y  L+   V++D+I  +S +   +                 +D        
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAAEPTQFYDEFCTDGVNDTCSYKASE 185

Query: 328 NS--ANRRIDI 336
            +   +RR +I
Sbjct: 186 KAFYLDRRTEI 196


>gi|241667260|ref|ZP_04754838.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254875811|ref|ZP_05248521.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254841832|gb|EET20246.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 208

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S     +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 69  MDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160


>gi|171060501|ref|YP_001792850.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
 gi|170777946|gb|ACB36085.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
          Length = 182

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++ +  FD    +   +   V++  G+ LA +    + I G+ D          N  L  
Sbjct: 75  KQRSVFFDFDEFVIRTQDRPVVELHGKYLASTPALKVVIEGNADER---GSREYNLALGN 131

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
            RA +  Q     G ++ ++  IS +   R   A   +   + NRR D+
Sbjct: 132 KRAQAVVQSFKLLGAADGQMEAIS-YGEERPMDAGHDEAAWAKNRRADV 179


>gi|86131085|ref|ZP_01049684.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818496|gb|EAQ39656.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 278

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 28/164 (17%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
              A+  +K L++   +  +     +       +                    +F  + 
Sbjct: 127 PKEAIAEEKELEETKDRYKTFEDEPIVKGDRILLK-----------------NILFKTNY 169

Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR-----LSLDRAYSA 295
           S    ++   L K+ + LA   E+   I+GH            N +     LS  RA   
Sbjct: 170 SYIHGKSRKDLNKLAKYLAAHPEIIFKIQGHVCCV-DHGRDGINLKTGKRNLSEARAKFI 228

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           Y  L   GV++ R+ +  GF         DP +    R++ILV 
Sbjct: 229 YDYLADHGVAKKRM-RYQGFGSRFPL-GGDPKDDK--RVEILVT 268



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLS 288
           D+ +   F+   S  +      L++    L     E ISI G+ D       A +NW LS
Sbjct: 8   DKTHETFFETDKSNLVAIENAKLERFITSLPLDKIEDISIYGYCDDR--GTDAYNNW-LS 64

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAH---HRL-KIASDPMNSANRRIDILV 338
            +RA +  Q  +  G+++  I    G       RL  + S+   + NR+++I+V
Sbjct: 65  QERANTIKQKFVDRGIADSIIKNSDGKGELLLTRLDDVGSEVQRTLNRKVEIIV 118


>gi|183219562|ref|YP_001837558.1| putative MotB protein [Leptospira biflexa serovar Patoc strain
          'Patoc 1 (Paris)']
 gi|189909704|ref|YP_001961259.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167774380|gb|ABZ92681.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167777984|gb|ABZ96282.1| Putative MotB protein [Leptospira biflexa serovar Patoc strain
          'Patoc 1 (Paris)']
          Length = 242

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 16 IIKKKV---AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72
          + K+       ++   +   W + YAD +T+L+  F++++ ++  D      + +     
Sbjct: 1  MRKRSRFVSREEEHVESHDRWLLTYADMITLLLGLFIILYAVSKVDSKRLNEVAKDIKRG 60

Query: 73 GKNLMTASKGIFDEQNPPERSS 94
              +++   I D  +      
Sbjct: 61 FGLNVSSIGVILDGGSGILEDD 82


>gi|150007308|ref|YP_001302051.1| outer membrane protein OmpA [Parabacteroides distasonis ATCC 8503]
 gi|255014067|ref|ZP_05286193.1| outer membrane protein OmpA [Bacteroides sp. 2_1_7]
 gi|262382119|ref|ZP_06075257.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
 gi|42718022|gb|AAS38436.1| outer membrane protein A [Parabacteroides distasonis ATCC 8503]
 gi|149935732|gb|ABR42429.1| outer membrane protein OmpA [Parabacteroides distasonis ATCC 8503]
 gi|262297296|gb|EEY85226.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
          Length = 381

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPET 248
             L DL  +I+S L     +   + V     +  +  +      N   F  +S+      
Sbjct: 236 ALLNDLNGQINS-LRAANDELSKRPVSCPECQETVTEVVNNYVDNVVYFRINSAKIDKNQ 294

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307
            + +    E + ++   I + G+ D       +  N  LS  RA +  + L+ K G+S  
Sbjct: 295 QINIYNTAEFMKNNNAPIKVVGYADKK--TGTSDYNMGLSEKRARAVAKELIDKYGISSS 352

Query: 308 RISKISGFA-HHRLKIASDPMNSANRRIDIL 337
           +I  I       +    +        R+ I+
Sbjct: 353 QI-TIEWRGSDEQPYGENSWN-----RVVIM 377


>gi|229495751|ref|ZP_04389479.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406]
 gi|229317325|gb|EEN83230.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406]
          Length = 398

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 13/154 (8%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI----LISIIDQRNTPMFDKSSSI 243
               + DL  +I+S L    A+   + V        +     +          F   S  
Sbjct: 251 DMDLINDLNGQINS-LRAENAELAKRPVSCPECPEVVAPETKVVAGLSEKAITFKFDSDK 309

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             P   +VL +I + +  S + I++ G  D       A  N  LS  RA +   +L    
Sbjct: 310 LTPNQEIVLYEIAKFVKESNQPITVIGFAD---VTGNANYNLALSERRAKAVANILTTQY 366

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
                +  +                + N R+ I+
Sbjct: 367 DVPSDMINVEWQGETEQFDT----RAWN-RVVIV 395


>gi|332885102|gb|EGK05354.1| hypothetical protein HMPREF9456_02853 [Dysgonomonas mossii DSM
           22836]
          Length = 401

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 10/117 (8%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
            + +  N   F+   S   PE+   L KI  +L ++T     I G+TDA      A  N 
Sbjct: 275 ELCELFNNIYFEFDKSDIRPESNETLDKIANILNNNTAKKYLITGYTDAR---GSAEYNI 331

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337
            LS  RA S  + L   GV  D I K  G      +     S  +   +R+  ++I+
Sbjct: 332 GLSRRRAASVIKALEDRGVPTD-ILKSRGVGKKISYAPVSESHIVREGDRKVTVEII 387


>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2075

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 16/173 (9%)

Query: 172  NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
            +     L ++    + +  +L +    +S  L       +   +            +   
Sbjct: 1914 DGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKE-----LKDKISVIEKIKMNEDDLYTL 1968

Query: 232  RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSL 289
                +              +L+ I   L  + +     I G+TD     +    N  L L
Sbjct: 1969 DGYRL---GIHELTKSQEEMLKNIVRELNENYKNRKIYITGYTDNV---SGENLNLELGL 2022

Query: 290  DRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
             RA    + L + G+     I K+S   ++ +   +   N    NRR++I + 
Sbjct: 2023 KRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2075


>gi|255534155|ref|YP_003094527.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255347139|gb|ACU06465.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 568

 Score = 61.9 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +D   S   P+   +L  +  V++ +    I +  HTD+         N RLS  RA +A
Sbjct: 488 YDFDKSNIRPDAGRILDNLLNVMSQNPTLKIELSSHTDSR---GKDAYNLRLSQQRAEAA 544

Query: 296 YQVLMKSGVSEDRISK 311
              L+  GV+ DR+  
Sbjct: 545 VNYLVGKGVARDRMVA 560


>gi|323136170|ref|ZP_08071252.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
 gi|322398244|gb|EFY00764.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
          Length = 288

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 70/225 (31%), Gaps = 36/225 (16%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           S  RD +K       + + +    E+         +++     +  L  +A +    L  
Sbjct: 40  SQFRDPDKVSRKEYESIVRERDKLEKEVRELREQLKRLANRPVETYLAAVANQRERILKD 99

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L +         +   +  + ++  +    +F   SS   P+   +++ I   L      
Sbjct: 100 LQSKLKADFPDLQVVISEEMDALRFK-GDGLFKTGSSELRPDKRRIVESIATRLGEVLPC 158

Query: 266 IS----------------------IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
            +                      + GHTD+         N  LS +RA   +  + K  
Sbjct: 159 YTLGPRSSWNSRCNAAGAVIEAVLVEGHTDSD---GQDNSNITLSTNRANETFFAMTKHE 215

Query: 303 ----GVSEDR---ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
                   DR   +  ++G+   R    +        NRRID+ +
Sbjct: 216 PALVDFRNDRAQPVLSVAGYGRMRPVADNATQEGKATNRRIDLRI 260


>gi|91201946|emb|CAJ75006.1| similar to H+-driven flagellar motor component MotB [Candidatus
           Kuenenia stuttgartiensis]
          Length = 236

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 2/148 (1%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM--TAS 80
                     W + Y D +T+L+ FF+++  ++  + D  K   +              S
Sbjct: 4   EAPKGPETPGWLLTYGDMVTLLVTFFVMLISLSTINVDKYKEAMKQVQASIGGTHVLEGS 63

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
           K   D+    +     ++D            +  +      +            +     
Sbjct: 64  KQPLDKDAKSDIVDIKEVDFPPTRMQELTETEKFVEDKEWYQYLNDFVTKSELSNYIDIE 123

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
           E     + +           + L    N
Sbjct: 124 EIKVGYIVKIPVDVCFEKGESILTWEAN 151


>gi|260171997|ref|ZP_05758409.1| major outer membrane protein OmpA [Bacteroides sp. D2]
 gi|315920310|ref|ZP_07916550.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694185|gb|EFS31020.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 395

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243
            ++  +    +    ++ +         +  +       ++I+       T  F   S  
Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  + L  +   +  S     +I G+ D+         N +LSL+RA     +L+K 
Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361

Query: 303 -GVSEDRISKISGFA 316
            G+S DR+   +G  
Sbjct: 362 YGISADRLKVAAGGG 376


>gi|256839597|ref|ZP_05545106.1| outer membrane protein OmpA [Parabacteroides sp. D13]
 gi|298375294|ref|ZP_06985251.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 3_1_19]
 gi|301310692|ref|ZP_07216631.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 20_3]
 gi|256738527|gb|EEU51852.1| outer membrane protein OmpA [Parabacteroides sp. D13]
 gi|298267794|gb|EFI09450.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 3_1_19]
 gi|300832266|gb|EFK62897.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 20_3]
          Length = 381

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPET 248
             L DL  +I+S L     +   + V     +  +  +      N   F  +S+      
Sbjct: 236 ALLNDLNGQINS-LRAANDELSKRPVSCPECQETVTEVVNNYVDNVVYFRINSAKIDKNQ 294

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307
            + +    E + ++   I + G+ D       +  N  LS  RA +  + L+ K G+S  
Sbjct: 295 QINIYNTAEFMKNNNAPIKVVGYADKK--TGTSDYNMGLSEKRARAVAKELIDKYGISSS 352

Query: 308 RISKISGFA-HHRLKIASDPMNSANRRIDIL 337
           +I  I       +    +        R+ I+
Sbjct: 353 QI-TIEWRGSDEQPYGENSWN-----RVVIM 377


>gi|160882396|ref|ZP_02063399.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483]
 gi|156112209|gb|EDO13954.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483]
          Length = 395

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 5/135 (3%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243
            ++  +    +    ++ +         +  +       ++I+       T  F   S  
Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303

Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  + L  +   +  S      I G+ D+         N +LSL+RA     +L+K 
Sbjct: 304 LSPQEEMNLSYLASKIKESPNTTYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361

Query: 303 -GVSEDRISKISGFA 316
            G+S DR+   +G  
Sbjct: 362 YGISADRLKVAAGGG 376


>gi|283782103|ref|YP_003372858.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283440556|gb|ADB18998.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
          Length = 261

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 45/138 (32%), Gaps = 7/138 (5%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD-DTKKAIEQYFNPFGKNLMTASK 81
            +D P  +  W + + D M++L+ FF+++  ++     D  + +    +       + S 
Sbjct: 4   EEDPPAGIPEWVVTFGDMMSLLLTFFILLASMSEIKQNDKFQGVADSMHEQFGYDSSMSH 63

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
                  P E S +N    ++          +  G    K      ++        + + 
Sbjct: 64  V------PGEMSPRNSSMAAMALTGRAKRAKVVQGGVKSKGTTGENQHVRIVRPGDRTTI 117

Query: 142 HCKNSLTRDSEKGKDLCK 159
                 + DS    +  +
Sbjct: 118 GTVVYFSEDSATLSEDAE 135



 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 71/236 (30%), Gaps = 14/236 (5%)

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
             D   G       +  + + +        S        +       + +    + S++ 
Sbjct: 4   EEDPPAGIPEWVVTFGDMMSLLLTFFILLASMSEIKQNDKFQGVADSMHEQFGYDSSMSH 63

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                 P  S    +A+  + +    AK +   +         + V          I   
Sbjct: 64  VPGEMSPRNSSMAAMALTGRAK---RAKVVQGGVKSKGTTGENQHVRIVRPGDRTTI--- 117

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRL 287
                  F + S+    +  V L    E  A   + I +RGHT           +DNW L
Sbjct: 118 --GTVVYFSEDSATLSEDAEVDLLGAAETFAGKPQKIELRGHTSRGTPAADSVFKDNWEL 175

Query: 288 SLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIAS-DPMN-SANRRIDILVED 340
           +  R+ +   VL+    +   RI +IS            DP     N R+++ + +
Sbjct: 176 AYKRSLAVMHVLVDRMKIDPKRI-RISVAGPFEPVHTGIDPEKLKQNPRVEVFLLE 230


>gi|218531252|ref|YP_002422068.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
 gi|218523555|gb|ACK84140.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
          Length = 296

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 41/228 (17%)

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST--LSGL 206
           +D +            +                ++    RK+R   L   +S+       
Sbjct: 44  KDDQTVPLPEYRQIERERDRLATENADLSREVARLEDELRKERTNRLQTYLSAVSSERDR 103

Query: 207 VADNIVKGVLFETTRTGILISII----DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           +   +   ++ +      ++SI       +   +F         +   V+  I   L   
Sbjct: 104 ILRTLRDRLVVDFPELENIVSIETGALRFKGDGLFKTDRWQLAEDKRRVVTAIATRLNEL 163

Query: 263 TEVI----------------------SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                                      I GHTDA       R N+ LS +RA      ++
Sbjct: 164 LPCYTFGKAARWQASCNAAGAVIEAVQIEGHTDA---SGQDRSNFSLSTERAVETLFAMI 220

Query: 301 KS--GVSEDR------ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
                + ++R      +  +SG+   R    +        NRRID+ +
Sbjct: 221 GREPALLDNRNSAGQPVLSVSGYGRLRPVADNTSERGRATNRRIDLRI 268


>gi|237719069|ref|ZP_04549550.1| major outer membrane protein OmpA [Bacteroides sp. 2_2_4]
 gi|229451448|gb|EEO57239.1| major outer membrane protein OmpA [Bacteroides sp. 2_2_4]
          Length = 395

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243
            ++  +    +    ++ +         +  +       ++I+       T  F   S  
Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  + L  +   +  S     +I G+ D+         N +LSL+RA     +L+K 
Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361

Query: 303 -GVSEDRISKISGFA 316
            G+S DR+   +G  
Sbjct: 362 YGISADRLKVAAGGG 376


>gi|299148152|ref|ZP_07041214.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_23]
 gi|298512913|gb|EFI36800.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_23]
          Length = 395

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243
            ++  +    +    ++ +         +  +       ++I+       T  F   S  
Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  + L  +   +  S     +I G+ D+         N +LSL+RA     +L+K 
Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361

Query: 303 -GVSEDRISKISGFA 316
            G+S DR+   +G  
Sbjct: 362 YGISADRLKVAAGGG 376


>gi|254418948|ref|ZP_05032672.1| OmpA family protein [Brevundimonas sp. BAL3]
 gi|196185125|gb|EDX80101.1| OmpA family protein [Brevundimonas sp. BAL3]
          Length = 385

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 7/116 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284
           +    +     FD   S    E   V+ +        +   + I G+TD       A  N
Sbjct: 272 VKPAAREFVVYFDWDRSDLTAEARSVVTQAATYAKSGAATRVLIVGYTDT---SGSAAYN 328

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338
             LS  R+ +    L+  GV+   +  + G     L   +        NRR  I +
Sbjct: 329 LGLSNRRSRTVADALVAQGVNGG-VIALDGKGETALAKPTADGVREPLNRRATINI 383


>gi|15966491|ref|NP_386844.1| peptidoglycan-associated lipoprotein precursor [Sinorhizobium
           meliloti 1021]
 gi|307300472|ref|ZP_07580252.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
           BL225C]
 gi|307318337|ref|ZP_07597772.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
 gi|22653891|sp|Q926C3|OMP16_RHIME RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
           Precursor
 gi|15075762|emb|CAC47317.1| Peptidoglycan-associated lipoprotein [Sinorhizobium meliloti 1021]
 gi|306896019|gb|EFN26770.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
 gi|306904638|gb|EFN35222.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
           BL225C]
          Length = 176

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +  + LA      I+I GH D          N  L   R
Sbjct: 67  DRIFFDTDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADER---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GV  +R+  IS +   +           S NRR
Sbjct: 124 AAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166


>gi|293369508|ref|ZP_06616087.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292635393|gb|EFF53906.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 390

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243
            ++  +    +    ++ +         +  +       ++I+       T  F   S  
Sbjct: 239 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 298

Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P+  + L  +   +  S     +I G+ D+         N +LSL+RA     +L+K 
Sbjct: 299 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 356

Query: 303 -GVSEDRISKISGFA 316
            G+S DR+   +G  
Sbjct: 357 YGISADRLKVAAGGG 371


>gi|149912933|ref|ZP_01901467.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
 gi|149813339|gb|EDM73165.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
          Length = 512

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    ++   +    A  I+   S +  + + + V   +    +  +         F+ 
Sbjct: 355 DQAPEEIEINAQGDRFANAITQAGSEVGLEELQRMVALLSPLRRLTTTFR-------FEA 407

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+    ++   +Q++   L               S     A  N R++  RA +    +
Sbjct: 408 GSARLDAQSRSNVQQLARALEIGLYDARRLVFVGFSDGEGPAAGNRRIAEQRAEAVKTAV 467

Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +  +    RI+ + + F         D       NRR+++ V 
Sbjct: 468 IAAAETANLSRITIETAAFGEAMPMACDDSEWGRQVNRRVEVWVR 512


>gi|189423395|ref|YP_001950572.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
 gi|189419654|gb|ACD94052.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
          Length = 201

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272
           +  +   T    L  I     T  F  +SS         L+KI   +      + + G+T
Sbjct: 80  QPDVVTVTPRNELPEIKGLLGTVHFQLNSSRLSQFEQGNLEKISRDIPA-GNAVDVTGYT 138

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
                      N +LS  RA +   VL   GV    I  I G        + D     NR
Sbjct: 139 CTI---GTDDYNKKLSFSRAEAVATVLKAKGV---HIGTIEGKGKCCP-ASQD--KQQNR 189

Query: 333 RIDIL 337
           R++I+
Sbjct: 190 RVEII 194


>gi|332300803|ref|YP_004442724.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177866|gb|AEE13556.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 387

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 12/141 (8%)

Query: 201 STLSGLVADNIVKGVLFETTRTGIL--ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
           S+L    A+   + V        +    ++    N   F   S+      ++ +    E 
Sbjct: 252 SSLRAQNAELSKRPVSCPECPDALAPATAVNVIENVVAFRIGSAKIDKNQMINVYNSAEA 311

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
              +   I I G+ D          N  LS  RA +    L+ + GV+ D I  I     
Sbjct: 312 AKANGGKIYIVGYADEQ--TGTPEINMSLSERRAEAVKNALINNYGVNPDNIV-IDFKGD 368

Query: 318 H-RLKIASDPMNSANRRIDIL 337
             +    ++       R+ I+
Sbjct: 369 TVQPFATNEWN-----RVAII 384


>gi|162448918|ref|YP_001611285.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
 gi|161159500|emb|CAN90805.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
          Length = 195

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 7/105 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+    E    L  +           + + + GH D          N  L   RA 
Sbjct: 93  FAFDSTSIEGEAAGALDALARCFVSGPLKGKGMKLIGHADPR---GETEYNLGLGQKRAG 149

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           S  + L K G+ + RI   S           +   + +R++DIL+
Sbjct: 150 SVAEYLGKKGLDQGRI-ATSSKGEFEATGTDEEGWARDRKVDILL 193


>gi|144898283|emb|CAM75147.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
          Length = 157

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + +       +V+  +  V   +    +++ G TD          N  LS  RA
Sbjct: 49  QIYFDTNKTDIDSRGRMVVNSVAHVATNNGLTRVTVIGKTDRV---GSTAGNVALSQRRA 105

Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRRIDILV 338
                 L+ +GV  DRI +  +G A   +  A+D     NR +D+ V
Sbjct: 106 DQVRDALIAAGVPADRIDTSWTGEARQAVSTANDAEEQRNRVVDVTV 152


>gi|149184887|ref|ZP_01863204.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
 gi|148830998|gb|EDL49432.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
          Length = 242

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 37/184 (20%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             + + L    +  +  L+ L      +G+  E      ++ + D     +FDK      
Sbjct: 43  QTKTEELTGANRTRAEILNDLQQSLKDRGLQVEIDTKTGVLRLPDD---VLFDKGQWELT 99

Query: 246 PETIVVLQKIGEVLAHSTEVI------------------SIRGHTDASPFRNIARDNWRL 287
                 + K+   +                          + GHTD+        +N+ L
Sbjct: 100 ERGQAAISKVASAMVEVLPCYTASDLCEGERSPHLIDAVFVEGHTDSDVMSGG-MNNYGL 158

Query: 288 SLDRAYSAYQVLMKS------------GVSEDR-ISKISGFAHHRLKIASDPMNS--ANR 332
           S+ RA + + +L ++            G      I  +SG+   R     D   +   NR
Sbjct: 159 SVRRAETTFTMLQRNQPALRGFLNRPAGEDGSAPILSLSGYGPDRPVDRGDSEEAKKRNR 218

Query: 333 RIDI 336
           RID+
Sbjct: 219 RIDL 222


>gi|288803192|ref|ZP_06408626.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|288334233|gb|EFC72674.1| conserved hypothetical protein [Prevotella melaninogenica D18]
          Length = 387

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           ++ +        RLQD  ++ +   + L     V+ V            ++    +  F+
Sbjct: 238 TQHQAALDALNARLQDAEEENARLRNELANQKPVETVSESVK------QLVTTPVSVFFE 291

Query: 239 KS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            + S+I   + +V +Q + +    +   + + G+ D+      A  N +LS  RA     
Sbjct: 292 INQSTIASQKDLVNVQALAKYAKDNNNNLLVTGYADS--ATGSADYNQKLSERRATVVAN 349

Query: 298 VLMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340
            L+K G+  ++I+ + G                 S NRR  + + +
Sbjct: 350 ELVKMGIENNKITTV-GKGGVETLSPI-------SFNRRATVQITE 387


>gi|154252498|ref|YP_001413322.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156448|gb|ABS63665.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 277

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 11/99 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F        PE   V+    +++A +T  +S+ GHTD       +  N  L   RA S  
Sbjct: 182 FGFDKYNLTPEAQSVID---QIVAETTGPLSVIGHTDT---SGSSAYNQALGQRRADSVS 235

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333
             L   G     +          L + +        NRR
Sbjct: 236 NALTAQG---KELCSAVSRGETELAVQTGDGVREPLNRR 271


>gi|150397824|ref|YP_001328291.1| peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
 gi|150029339|gb|ABR61456.1| Peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
          Length = 176

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    L +  + LA      ++I GH D          N  L   R
Sbjct: 67  DRIFFDTDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L+  GV  +R+  IS +   +           S NRR
Sbjct: 124 AAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166


>gi|322641772|gb|EFY38406.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
          Length = 178

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 5/86 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
            N   FD        +   +L      L  +     ++ GH D          N  L   
Sbjct: 69  NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFA 316
           RA +    L   GVS D+IS +S + 
Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YG 150


>gi|326317265|ref|YP_004234937.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374101|gb|ADX46370.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 177

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 10/117 (8%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            + +        F    +    +    +  +   +      + I G  DA+     A  N
Sbjct: 69  RVVVAGSVVKFYFASGRADLTADAAPAIADVVRAVKDGNRRVVISGFHDAT---GDAVAN 125

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILVED 340
             L+  RA +    L+ +G  EDRI         +      D   +  RR+++ ++ 
Sbjct: 126 AELARQRAQAVRDALVAAGAPEDRIEL------RKPELAQGDGNAAEARRVEVTLDA 176


>gi|307729365|ref|YP_003906589.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307583900|gb|ADN57298.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
          Length = 242

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 17/124 (13%)

Query: 232 RNTPMFDKS---SSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWR 286
            +  +F          LP     L +I   +     V  I++ GHTD          N  
Sbjct: 123 ESDTLFPFGKSSRESMLPAAKARLDEIAARIRQHEHVSAITVVGHTDRL---GPESINGP 179

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338
           LSL RA +    L+  G+    I    G      +      ++         +R + I V
Sbjct: 180 LSLARANTVRDYLVAHGLDGS-IVLAKGVGSSEPRTHCAEHDARALIACLQEDRYVSITV 238

Query: 339 EDRQ 342
           E R+
Sbjct: 239 EGRK 242


>gi|192288642|ref|YP_001989247.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192282391|gb|ACE98771.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 306

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             NT  FD  S    P+    LQ I + L         EV  I GHTDA        DN 
Sbjct: 174 DLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 230

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA +A  +L +  GV  + ++   G+    LKI +      NRR+ I
Sbjct: 231 SLSDRRAEAAAALLTQQFGVPAENLTS-QGYGEQYLKIQTQAPERQNRRVTI 281


>gi|126736793|ref|ZP_01752530.1| OmpA/MotB [Roseobacter sp. CCS2]
 gi|126713694|gb|EBA10568.1| OmpA/MotB [Roseobacter sp. CCS2]
          Length = 162

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 16/162 (9%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             +   R   L  +++    G   + +   +        +  +         F   SS  
Sbjct: 7   QAEGDARRAALVAEMARYDVGFEGELMGDMLGEMDENDRLSTTFR-------FRTGSSKL 59

Query: 245 LPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVL--M 300
                + +Q++   L    +   +   G TD          N RL+  RA +  + +  +
Sbjct: 60  DERGRLDMQRLIAYLQRVPDGTEVTFVGFTDDV---GAFDANQRLAEQRAAAVMEEMRAI 116

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
             G   +     +G+        +        NRR+++ + +
Sbjct: 117 TGGSINNVTMSTAGYGEIAPSACNISERGRGINRRVEVWISN 158


>gi|41349559|emb|CAF21861.1| major outer membrane protein [Pseudomonas putida]
          Length = 287

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272
            V  +      +  ++       FD   S+  P +   ++ + + +        ++ GHT
Sbjct: 197 NVTVDADGCPAVTEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 256

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           D+         N +LS  RA +  QVL   
Sbjct: 257 DSV---GPDAYNQKLSERRANAVKQVLTNQ 283


>gi|300867579|ref|ZP_07112229.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300334467|emb|CBN57399.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 982

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
            G+   +    + E      + + + ++   ++    +      +   +   +N+ E   
Sbjct: 762 TGNLPNQGLRAKAEKIAQATAPNLKVDNKIIAIDVPPDPASVAAEVKRVTAVLNQIEGVS 821

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           +     E+ + ++        A+KI+ ++  +           ++  + + ++ +     
Sbjct: 822 ISSRYGERKVTVEGTVMQMTDAQKIAQSMKQVPG--------VQSVISTVKLNPLKITTR 873

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F+  S+    E   V+  I E L    +  + I GH+D    +     N +L+  RA 
Sbjct: 874 IYFNVGSATLNSEYGEVIGNIKEFLKQYPQKHLKIIGHSDR---KGNLAINQQLARKRAE 930

Query: 294 SAYQVLMKSGVSEDRISKIS 313
           +    L++ GV   R+  ++
Sbjct: 931 AVRVALVQQGVDPRRLQVVA 950


>gi|291447367|ref|ZP_06586757.1| secreted protein [Streptomyces roseosporus NRRL 15998]
 gi|291350314|gb|EFE77218.1| secreted protein [Streptomyces roseosporus NRRL 15998]
          Length = 215

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+         +  I E +       I + G TD       +     LS  
Sbjct: 104 QAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNL---GSSAHGDVLSKQ 160

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           RA + + VL K  +      +I G+       ++        NRR+++     +G
Sbjct: 161 RADAVHGVLSKQ-LGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEVSFPRGEG 214


>gi|239950069|gb|ACS36764.1| outer membrane protein P5 [Ornithobacterium rhinotracheale]
          Length = 301

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289
           +  +FD   +   P     L  +   + +       + + G+TD          N  LS 
Sbjct: 221 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 277

Query: 290 DRAYSAYQVLMKSGVSEDRISKI 312
            RA +    ++  GV+   ++ +
Sbjct: 278 KRAETVANYIVSKGVNPANVTAV 300


>gi|167572708|ref|ZP_02365582.1| ompA family protein [Burkholderia oklahomensis C6786]
          Length = 276

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 19/120 (15%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285
               +F    S      P     L +I   L    + I    + G+TD          N 
Sbjct: 154 DYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVRVTGYTDRL---GTDEYNR 210

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336
           +LSL RA +    L   G+  D I    G        A  P           + +RR+ I
Sbjct: 211 QLSLARAETIRSYLTTRGLPGDLIVA-QGLGKADPVSAGCPAGRSSEAIACLAPDRRVRI 269


>gi|167565602|ref|ZP_02358518.1| ompA family protein [Burkholderia oklahomensis EO147]
          Length = 276

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 19/120 (15%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285
               +F    S      P     L +I   L    + I    + G+TD          N 
Sbjct: 154 DYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVRVTGYTDRL---GTDEYNR 210

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336
           +LSL RA +    L   G+  D I    G        A  P           + +RR+ I
Sbjct: 211 QLSLARAETIRSYLTTRGLPGDLIVA-QGLGKADPVSAGCPAGRSSEAIACLAPDRRVRI 269


>gi|325103778|ref|YP_004273432.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324972626|gb|ADY51610.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 706

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
             +   +D   +   P+    L KI  ++    EV  I   H D+         N  LS+
Sbjct: 579 NFDNIYYDLDRAEIRPDARPALDKIALIMLTHPEVSIITSSHCDSR---ASNDYNKLLSI 635

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDI 336
            R  SA   L+  GV+ +RI  +  +   RL          S+     NRR + 
Sbjct: 636 RRGNSAKAYLVAKGVAANRIK-VEYYGKTRLTNRCYDGVPCSEEEQQMNRRTEF 688


>gi|241113057|ref|YP_002972892.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861265|gb|ACS58931.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 184

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+   P  +  L      L  +   +  ++G  D       A     
Sbjct: 68  ILNVGRRIYFKQDSATLDPVAMATLDNQAAWLNRNPSWLLKLQGFADD---SGSAAKMET 124

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L+  GV   R+    G+ + R         S    NRR+
Sbjct: 125 LSQKRADAAMAYLVSKGVDARRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173


>gi|297539675|ref|YP_003675444.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
 gi|297259022|gb|ADI30867.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
          Length = 191

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289
            +    FD  S     E   +++   + L   T    I +G+TD          N  L  
Sbjct: 82  SKRNVYFDFDSDAVKAEFRPLIEAHAKYLLAHTSAKVILQGNTDER---GTREYNLSLGQ 138

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337
            R+ +  + L   GV + +I  +S F   +     A D  +  NRR+D++
Sbjct: 139 RRSVAVKKSLNLLGVQDAQIETVS-FGEEKATEGCADDACSKQNRRVDVV 187


>gi|325278790|ref|YP_004251332.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324310599|gb|ADY31152.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 366

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +S++  PE    + ++   L  +    +++ G+ D        R N  LS  RA
Sbjct: 261 NVFFKINSAVIRPEEAGKVDELAAYLQKNPAAQVTLTGYADVQ--TGNHRLNKTLSARRA 318

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVEDR 341
            +    L   G++ DRI+  S      +     +       R+ I +   
Sbjct: 319 QAVADALTAKGIAADRITADS-QGDTVQPFATPEEN-----RVTICITAD 362


>gi|323529150|ref|YP_004231302.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323386152|gb|ADX58242.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
          Length = 349

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 52/162 (32%), Gaps = 19/162 (11%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLP 246
            +KRL D+   +  +    +           TT   + +      +   FD  +    LP
Sbjct: 191 AEKRLSDIQDNLRKSAESALQCKPAAAAPQSTTPQAVTLR---ADSLFRFDGGNDAAMLP 247

Query: 247 ETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                L  +   L   T    I I G+TD          N  LSL RA +  + L   GV
Sbjct: 248 AGRRALDAVARRLTTVTALREIRITGYTDRL---GENAHNRSLSLQRAQTVARYLRARGV 304

Query: 305 SEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338
           +      + G A                    + NRR++I +
Sbjct: 305 TSP--IAVRGLASANPVAECRQSRRDELVQCLAPNRRVEIEL 344


>gi|220921480|ref|YP_002496781.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219946086|gb|ACL56478.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 666

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285
             +T  FD  S    P+    L  I E +      +  EV  I G+TDA        DN 
Sbjct: 545 DIDTITFDSGSWQIAPDQARRLAVIAEAIGRAVQRNPQEVFLIEGYTDAV---GNDVDNL 601

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA     VL +   V  + ++   G+    LK+ +   +  NRR+ +
Sbjct: 602 SLSDRRAQEVATVLTRDFRVPPENLTT-QGYGEQYLKVNTQEASRENRRVTV 652


>gi|108762481|ref|YP_632884.1| OmpA family protein [Myxococcus xanthus DK 1622]
 gi|108466361|gb|ABF91546.1| OmpA family protein [Myxococcus xanthus DK 1622]
          Length = 386

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 17/113 (15%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288
           F    +         L K   ++  +             + GHTD       A +N  LS
Sbjct: 261 FASGQADIPATERGKLDKSHALIVDALTKYGRFASLRLYVMGHTDTV---GAAAENLDLS 317

Query: 289 LDRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           + RA S      K G+   R+     G       +    +   + NRR + ++
Sbjct: 318 VRRAKSLAAYFRKKGL---RVPVYYEGLGEEAPAVATPDETAEAGNRRAEYII 367


>gi|294672796|ref|YP_003573412.1| OmpA family protein [Prevotella ruminicola 23]
 gi|294473078|gb|ADE82467.1| OmpA family protein [Prevotella ruminicola 23]
          Length = 384

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           R    F    ++        + ++ E L  + E  ++I G+ DA       R N RL+  
Sbjct: 282 RRDIFFAIGKTVIRKSEQQKVNEVVEYLNANPEAKVNITGYADA--GTGNDRINDRLAAG 339

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RA    + L K+GV+  RIS  S  A  +    +D       R+ I++
Sbjct: 340 RADVVVKALKKAGVAASRISYDSKGARVQPFADNDSN-----RVSIVI 382


>gi|327396327|dbj|BAK13749.1| OmpA/MotB domain protein [Pantoea ananatis AJ13355]
          Length = 287

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 43/223 (19%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T   +K +   ++ D      + E   L  +   +    +      +L  ++ + L    
Sbjct: 49  TVPRDKYEQAVQTRDKTIVDLRAEIALLKQVDPLEQYMSQAAAARLNLLYQLRNNLKQSF 108

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266
            +     V        +           +F  +S     +   +++ + + L        
Sbjct: 109 PEL---PVDVIPEEGTLRFQ-----GEGLFTSNSFTLSDDKRKIVEALAKTLDSLLPCYT 160

Query: 267 ---------------------SIRGHTDASPFRNIARDNWRLSLDRA-------YSAYQV 298
                                 I GHTD+   +     N  LS +RA        +A   
Sbjct: 161 FSQSVGWNKSCNPSFAIIEAVQIEGHTDS---KGEDVYNLNLSTNRAITTFTSMLAAAPD 217

Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           L+    +    +  ++G+   R    +D     + NRRID+ +
Sbjct: 218 LVAHFNMRSQPVLSVAGYGKMRPVKPNDTPQNMAMNRRIDLRI 260


>gi|254476621|ref|ZP_05090007.1| OmpA family protein [Ruegeria sp. R11]
 gi|214030864|gb|EEB71699.1| OmpA family protein [Ruegeria sp. R11]
          Length = 176

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            LA +   +    A+   +        + V        +    ++  D+ +   F    S
Sbjct: 17  ALARESHAQEMQDAELCEAVFREYGVRSEVCNAPQPKPQPDRELTAQDRESHIFFLSGGS 76

Query: 243 IPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
              P+    +  +  VL  +      + + GH+DA         N RLS  RA      L
Sbjct: 77  RLSPQMERQVVLLAGVLNTAPMKDACLRLTGHSDA---SGGRDANRRLSEQRAEVVAAAL 133

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +     DR+ ++ G                NRR+ I
Sbjct: 134 RRRLDRGDRVEEVRGVGEETPLEGWPSTARENRRVSI 170


>gi|5689652|emb|CAB51905.1| OmpA protein [Bordetella petrii]
          Length = 152

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294
            FD   S   PE   +L ++ +          I  GHTD+       + N  LS  RA S
Sbjct: 76  FFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHTDSI---GTEKYNQGLSERRAAS 132

Query: 295 AYQVLMKSGVSED 307
               L+  GV   
Sbjct: 133 VKSYLVSKGVDPT 145


>gi|53717117|ref|YP_105939.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           mallei ATCC 23344]
 gi|238561376|ref|ZP_00442008.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
 gi|52423087|gb|AAU46657.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei ATCC 23344]
 gi|238524569|gb|EEP88001.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
          Length = 271

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 153 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 209

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336
            RA +    L   G+  D I    G        ++                +RR+ I
Sbjct: 210 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 264


>gi|254474599|ref|ZP_05087985.1| OmpA/MotB [Ruegeria sp. R11]
 gi|214028842|gb|EEB69677.1| OmpA/MotB [Ruegeria sp. R11]
          Length = 518

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 14/166 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   LA  I++  + +  + + + V        +  S         F+ 
Sbjct: 361 DQAPERISMNAQGDRLANAIAAAGTEVPLEELQRLVNRLAGLQRLTTSFR-------FEP 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+ P  ++   +Q++   L               S     A  N  +++ RA S    +
Sbjct: 414 GSTRPDAQSRSNIQQLARALEAGAYDARELLFVGFSDGDGGAAANQSIAMKRAESVRDAV 473

Query: 300 MK----SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +     + +    I  +  F         D       NRR+++ V 
Sbjct: 474 IAAAETANIDRTEI-AVEAFGEALPMACDDQRWGRQVNRRVEVWVR 518


>gi|239943905|ref|ZP_04695842.1| putative secreted protein [Streptomyces roseosporus NRRL 15998]
 gi|239990359|ref|ZP_04711023.1| putative secreted protein [Streptomyces roseosporus NRRL 11379]
          Length = 219

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+         +  I E +       I + G TD       +     LS  
Sbjct: 108 QAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNL---GSSAHGDVLSKQ 164

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343
           RA + + VL K  +      +I G+       ++        NRR+++     +G
Sbjct: 165 RADAVHGVLSKQ-LGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEVSFPRGEG 218


>gi|126738442|ref|ZP_01754147.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
 gi|126720241|gb|EBA16947.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
          Length = 518

 Score = 61.1 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 12/164 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   L+  I ++   L  D + + V        +  S         F+ 
Sbjct: 361 DQAPERISMNAQGDRLSNAILASGKDLGVDELQRMVRQLANLQRLTTSFR-------FET 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+ P  ++   ++++   L               S     A  N +++L RA +    +
Sbjct: 414 GSARPDAQSRSNIEQLARALETGLYDGRKLVFAGFSDGDGAAAANRKIALKRATAVRDAV 473

Query: 300 MKSGVSEDR---ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           + +   E     + ++  F         +       NRR+++ V
Sbjct: 474 LAAAEPESAARVVIEVEAFGEALPMACDNSAWGRQVNRRVEVWV 517


>gi|329894132|ref|ZP_08270117.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
 gi|328923304|gb|EGG30624.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
          Length = 228

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 66/225 (29%), Gaps = 7/225 (3%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            KKQ           S    +   K +   +   G  L     +   +          L 
Sbjct: 1   MKKQIVMGLIVASMASAGADAAEKKLNSPENIGFGSGLVAGAAIGGPVGGMIGALGGILL 60

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
              I   K    LQ       S L+   A  I            +  S ++      F  
Sbjct: 61  GNSITTEKTIAELQASLADNESALAAERASRIALEKRNAQLAASMERSRLELAMNVQFRT 120

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            SS   P     L+ + E+L   +   +++ G+ D          N +LS  R  +  QV
Sbjct: 121 GSSELEPLYQQSLENMVELLKKDSSLQVTLSGYADRR---GDEAFNEQLSAQRVAAVQQV 177

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
               G+  +RI     F        +     ++ +RR+ I V   
Sbjct: 178 FRNGGIHLNRIKTRE-FGERSPVDPTVSMDGHAFDRRVAIEVSGS 221


>gi|157375630|ref|YP_001474230.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157318004|gb|ABV37102.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
          Length = 245

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 20/175 (11%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +   L     +        + L  ++ +  S    L                G+ +    
Sbjct: 77  QQAQLAMQESKMNQLSDENRSLMAISNRYDSAQHELAQLKAEDQQKLAELSLGLNVQ--- 133

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F   SS  +P   + L ++   ++ S E  + + G+ D       +  N  LS 
Sbjct: 134 ------FKTGSSELVPHFKLQLDEVAYAMSLSPELRLDLTGYADRR---GDSTYNQALSE 184

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVED 340
            R       L+  G+ E R+     +               N    RR+ + +  
Sbjct: 185 QRVAEVKTYLVNQGIDESRLD-FRAYGASAPMTEEQSFE--NDFFDRRVTVKLLS 236


>gi|114775594|ref|ZP_01451162.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
 gi|114553705|gb|EAU56086.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
          Length = 198

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 14/108 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD +S+   P     L  + + +      I +RG+TDA         N  L+  RA +  
Sbjct: 97  FDFNSATIKPNEKTKLAGLFKDI-GRNTTIILRGYTDA---AGGMAYNQHLAWRRAQAVR 152

Query: 297 QVLMKSGVSEDRISKISGFAH----HRLKIASDPMNSANRRIDILVED 340
           + L +  +      +I  F       +       +   NRR++I +  
Sbjct: 153 RWLSEH-LERQPGYEIRAFGKCCYARQP-----GLRPENRRVEIYIRK 194


>gi|17988380|ref|NP_541013.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
 gi|225685925|ref|YP_002733897.1| TraQ protein [Brucella melitensis ATCC 23457]
 gi|256042982|ref|ZP_05445928.1| TraQ protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112034|ref|ZP_05452979.1| TraQ protein [Brucella melitensis bv. 3 str. Ether]
 gi|256261862|ref|ZP_05464394.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
 gi|260564216|ref|ZP_05834701.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
 gi|265989419|ref|ZP_06101976.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993480|ref|ZP_06106037.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|81850946|sp|Q8YDY8|YU36_BRUME RecName: Full=Type IV secretion system putative outer membrane
           lipoprotein BMEII0036; Flags: Precursor
 gi|17984159|gb|AAL53277.1| outer membrane protein oprf [Brucella melitensis bv. 1 str. 16M]
 gi|225642030|gb|ACO01943.1| TraQ protein [Brucella melitensis ATCC 23457]
 gi|260151859|gb|EEW86952.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
 gi|262764350|gb|EEZ10382.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000088|gb|EEZ12778.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091339|gb|EEZ15875.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
          Length = 172

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q     F +  ++  P +   + ++  +L    + I++RG TD S          +
Sbjct: 61  RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNSCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|325954512|ref|YP_004238172.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437130|gb|ADX67594.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 436

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 57/170 (33%), Gaps = 7/170 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQR 232
            L P S    +   R + +      I   +   + +N              +   I    
Sbjct: 271 DLEPNSAPGAVVDTRGRTIDHNGNGIPDDIEEYIKNNQGSNTTTVLADSDLLEQLINSGI 330

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               FD +   P   ++  ++ + E L  +    + + G+ D          N  LS  R
Sbjct: 331 INVYFDYNVDQPYEASVGGIKFVSEYLKRNPNVQMDVIGYADPV---GSDGFNKNLSQRR 387

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVED 340
           A +  ++L++ G + + ++ +      +    ++   +   RR+   ++ 
Sbjct: 388 AENVKRILVQQGANANNLN-VVAMGEDKSFQNSTVSAHQLARRVIFKIKK 436


>gi|150024135|ref|YP_001294961.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149770676|emb|CAL42140.1| Probable outer membrane protein, OmpA family [Flavobacterium
           psychrophilum JIP02/86]
          Length = 272

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           ++  FD        +         + + +   E + I G+ D          N++LS +R
Sbjct: 25  HSIYFDFDKFKLEEKQANETVNFIKNIDSTRIESVQIYGYCDDR---GKESYNFKLSNNR 81

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAH---HRLKIASDPM-NSANRRIDILV 338
           A    + L++SG+    I  I G          I + P   S NRR+D++V
Sbjct: 82  ASIIQKKLVESGIKNKIIVTIEGKGRVMIDDDIIENLPEVRSKNRRVDVVV 132



 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 10/114 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW-----R 286
              +F K SS         L+KI ++L         I+GH   +P       +       
Sbjct: 162 GDVLFQKGSSKLNVNAKNDLEKIAKMLLKYKNLQFEIQGHVCCTPPYQKEAIDRDTRKRE 221

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           LS++RA   Y   +   +S++R+    G+   +        +   RR+++++  
Sbjct: 222 LSINRAKVVYNFFVAKKISKNRMI-YKGYGTGKPLGKEPQYD---RRVELVITK 271


>gi|108813332|ref|YP_649099.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
 gi|108776980|gb|ABG19499.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
          Length = 553

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLK 321
           RA +     L  S VS      + G+   R  
Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPI 530


>gi|225628536|ref|ZP_03786570.1| lipoprotein [Brucella ceti str. Cudo]
 gi|237816578|ref|ZP_04595570.1| lipoprotein [Brucella abortus str. 2308 A]
 gi|225616382|gb|EEH13430.1| lipoprotein [Brucella ceti str. Cudo]
 gi|237787391|gb|EEP61607.1| lipoprotein [Brucella abortus str. 2308 A]
          Length = 104

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F +  ++  P +   + ++  +L    + I++RG TD +          +++  RA + Y
Sbjct: 3   FPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---QVARVRALAIY 58

Query: 297 QVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
             L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 59  NWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 104


>gi|167568634|ref|ZP_02361508.1| cytochrome c oxidase, subunit II [Burkholderia oklahomensis C6786]
          Length = 505

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 19/152 (12%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + +A   +  L   VA             +G             F+   S    +   
Sbjct: 363 QPKQVADARNGKLPEDVAQQAGDTAAPAAEASGAAAQAQALPAEIYFETGKSELPADAKD 422

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +    E +    +  +++ G TD +        N  L+  RA +    L  +G++E+RI
Sbjct: 423 AIAAAAEYVKAHPDAKLALSGFTDKTGSAGA---NAELAKRRAQAVRDALKAAGIAEERI 479

Query: 310 S-----KISGFAHHRLKIASDPMNSANRRIDI 336
                  I+G A  +         +  RR++I
Sbjct: 480 ILKKPETITGGADAK--------EA--RRVEI 501


>gi|254294179|ref|YP_003060202.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
 gi|254042710|gb|ACT59505.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
          Length = 386

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 37/118 (31%), Gaps = 9/118 (7%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR---GHTDASPFRNIARDNW 285
             Q     F+  SS+       V+         +   ISI    G+TD          N 
Sbjct: 273 QSQDFAVYFEWDSSVLTVPAQEVVNSATRRALENGCTISIATIDGYTDT---SGNKAYNA 329

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           RLS  RA      L+  GV    +          L  A+        NRR  I++  R
Sbjct: 330 RLSARRAAVVRDALIARGVDAS-VVTTDAKGEEGLAKATADGVREPLNRRAQIILSVR 386


>gi|312884426|ref|ZP_07744130.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367738|gb|EFP95286.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 198

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
             +F+  SS   P  +  ++ + + L    +    ++G  +          N  LS  RA
Sbjct: 80  HILFENDSSEVSPIYLSQIRSMADFLDKYPDTSVELQGFANHL---GSHSHNLELSKQRA 136

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331
            +  +VL++ GV  +RI  I GF   +        +S N
Sbjct: 137 SNVKKVLVRYGVDFERI-SIVGFGDAK------TSHSQN 168


>gi|297180399|gb|ADI16615.1| hypothetical protein [uncultured delta proteobacterium
           HF0010_01J10]
          Length = 597

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 70/273 (25%), Gaps = 27/273 (9%)

Query: 72  FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131
             +          D     +      +D                            ++  
Sbjct: 280 PMEPEDADDFEDEDGCPDADNDGDGILDADDICPNEAGEARTDGCPDADGDNIADKDDRC 339

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             ++ ++  E C +          D C +   E       +     +   +         
Sbjct: 340 PDVAGTEAFEGCADGDEDGLADPDDECPTEAGEAPAFGCPDADGDNVPDYRDECADDAA- 398

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
                   +  +    ++              +   I        F    +     T   
Sbjct: 399 --------AEGVDATRSNGCAADAWVGMNGVQLARGI-------SFSTGRTTLTSTTRRG 443

Query: 252 LQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           L K+  +L     +  +    HT+         DN  L+  RA +    L++ GV+ +R+
Sbjct: 444 LDKVAALLTEFAGLTKVEVAAHTNERR---SEADNVSLTKARAEAIMGYLVEKGVAAERL 500

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           S I G    +     D   +  RR++  + +++
Sbjct: 501 SMI-GHGSEK---TEDGQAA--RRVEFNILEKE 527


>gi|302345879|ref|YP_003814232.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302149522|gb|ADK95784.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 387

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           ++ +        RLQD  ++ +   + L     V+ V            ++    +  F+
Sbjct: 238 TQHQAALDALNARLQDAEEENTRLRNELANQKPVETVSESVK------QLVTTPVSVFFE 291

Query: 239 KS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
            + S+I   + +V +Q + +    +   + + G+ D+      A  N +LS  RA     
Sbjct: 292 INQSTIASQKDLVNVQALAKYAKDNNNNLLVTGYADS--ATGSADYNQKLSERRATVVAN 349

Query: 298 VLMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340
            L+K G+  ++I+ + G                 S NRR  + + +
Sbjct: 350 ELVKMGIENNKITTV-GKGGVETLSPI-------SFNRRATVQITE 387


>gi|254411859|ref|ZP_05025635.1| Putative phospholipid-binding domain family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181581|gb|EDX76569.1| Putative phospholipid-binding domain family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 905

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 64/200 (32%), Gaps = 6/200 (3%)

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
           G T         +  +       Q+      +  D    K      ++   + +      
Sbjct: 684 GDTITLSGKLPNQYLVEKAGQIAQTTIPNGEIDNDIIAIKVPPDPVEVAAEVERVTAILN 743

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                      +  +   +    I    +  + + + +    ++    + +  +   +  
Sbjct: 744 QTERLAIWTNFQDGQVTVE-GSVIQVKDAQKITEALEEIPGVDSVTNTVQLQPLALASRI 802

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD +S+         +  +   LA        + GH+D         +N  L+L+RA +
Sbjct: 803 YFDLNSADLKASEQAKMDALTAFLADYPNQSLRVIGHSD---PSGTPLENQELALERAKA 859

Query: 295 AYQVLMKSGVSEDRISKISG 314
             +VL++ G+   R+ ++SG
Sbjct: 860 VAEVLVRQGIDARRL-EVSG 878


>gi|330904017|gb|EGH34589.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 88

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 36/80 (45%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                         +LFE T+ G+ I I+D  N PMFD  S+   P    +L  + + + 
Sbjct: 1   KVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIK 60

Query: 261 HSTEVISIRGHTDASPFRNI 280
                +SI GHTDA+PF   
Sbjct: 61  SVPNKVSISGHTDATPFVGS 80


>gi|99082759|ref|YP_614913.1| OmpA/MotB [Ruegeria sp. TM1040]
 gi|99039039|gb|ABF65651.1| OmpA/MotB [Ruegeria sp. TM1040]
          Length = 517

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + L+  I S    +    + + +        +  S         F+  SS P  ++  
Sbjct: 371 QGERLSNAIRSAGEDIPLSELQRLISGLDGLQRLTTSFR-------FEAGSSRPDAQSRN 423

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DR 308
            +  +   L               S     A  N  +++ RA S  + + ++  +   DR
Sbjct: 424 NIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETANLDR 483

Query: 309 I-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           I  + + +         D       NRR+++ + 
Sbjct: 484 ISIETAAYGEALPIACDDSAWGRQANRRVEVWIR 517


>gi|254695204|ref|ZP_05157032.1| outer membrane protein OprF [Brucella abortus bv. 3 str. Tulya]
 gi|261215567|ref|ZP_05929848.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
 gi|260917174|gb|EEX84035.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
          Length = 172

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q     F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 61  RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|254487991|ref|ZP_05101196.1| OmpA domain protein [Roseobacter sp. GAI101]
 gi|214044860|gb|EEB85498.1| OmpA domain protein [Roseobacter sp. GAI101]
          Length = 520

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 53/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +  + +       I+   + +  + + +          +  S         F+ 
Sbjct: 363 DQTPEEIPIEDQGNRFTNAITVAGADVTLEELQRMTATLKPMARLSTSFR-------FEA 415

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++   +Q++   L               S      R N  ++L RA +  + +
Sbjct: 416 GSIRLDAQSRSNVQQLARALEIGQYDARRLLFVGFSDGDGAGRANREIALRRAEAVRRAV 475

Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +K+ V+   DR++  +  F         D       NRR+++ V 
Sbjct: 476 IKAAVTANLDRVTLDVDAFGEAMPMACDDSAWGRQANRRVEVWVR 520


>gi|39933290|ref|NP_945566.1| OmpA family protein [Rhodopseudomonas palustris CGA009]
 gi|39652915|emb|CAE25657.1| possible OmpA family member [Rhodopseudomonas palustris CGA009]
          Length = 689

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285
             NT  FD  S    P+    LQ I + L         EV  I GHTDA        DN 
Sbjct: 557 DLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 613

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            LS  RA +A  +L +  GV  + ++   G+    LKI +      NRR+ I
Sbjct: 614 SLSDRRAEAAAALLTQQFGVPAENLTS-QGYGEQYLKIQTQAPERQNRRVTI 664


>gi|93005426|ref|YP_579863.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92393104|gb|ABE74379.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 218

 Score = 60.4 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F K SS    E  + L  +   L       + I GH       +       L+ +
Sbjct: 84  EYRAFFAKGSSELSKEYQLELDTVALKLQEYYTATMRIEGHASVDEMSDTKLRPNSLARN 143

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334
           RA      L+ K  +  +R++  + +   +   +SD       NRR+
Sbjct: 144 RALIVKNYLVLKHKIDPERLNTFN-YDAEQPITSSDTEEGKSMNRRV 189


>gi|213022384|ref|ZP_03336831.1| hypothetical protein Salmonelentericaenterica_06936 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 62

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
                +L   GV   R+  I G         +      + NRR++ILV +
Sbjct: 14  AEVAALLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVEILVVE 62


>gi|251767113|ref|ZP_02266018.2| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei PRL-20]
 gi|254189998|ref|ZP_04896507.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254200781|ref|ZP_04907146.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei FMH]
 gi|254204753|ref|ZP_04911106.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei JHU]
 gi|147748393|gb|EDK55468.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei FMH]
 gi|147754339|gb|EDK61403.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei JHU]
 gi|157937675|gb|EDO93345.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
 gi|243063848|gb|EES46034.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei PRL-20]
          Length = 274

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 156 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 212

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336
            RA +    L   G+  D I    G        ++                +RR+ I
Sbjct: 213 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 267


>gi|298208247|ref|YP_003716426.1| OmpA/MotB [Croceibacter atlanticus HTCC2559]
 gi|83848168|gb|EAP86038.1| OmpA/MotB [Croceibacter atlanticus HTCC2559]
          Length = 424

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 7/142 (4%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEV 258
               S L A  +  G         ++  +ID+      F  +S  P   ++  +  + + 
Sbjct: 286 DEMESALDARYLKTGSETTVNGDDVIAELIDKGYVNVYFKFNSEEPSVYSLEAINYLVKY 345

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           +  +T+   ++ G+ D          N +LS  RA     +L+ SGVS  R+  + G   
Sbjct: 346 MNANTDANATLVGYADEI---GNEAYNQKLSEQRAQKINDILVASGVSASRL-TVKGGGE 401

Query: 318 HRLKIASDP-MNSANRRIDILV 338
                 S        RR+   +
Sbjct: 402 DNSVDKSSKYARQLMRRVTFKL 423


>gi|254457405|ref|ZP_05070833.1| OmpA family protein [Campylobacterales bacterium GD 1]
 gi|207086197|gb|EDZ63481.1| OmpA family protein [Campylobacterales bacterium GD 1]
          Length = 252

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           ++  I +++ +     +      E+ + LQ + + ++   +  + I GHTD       + 
Sbjct: 138 VISEIPEKQLSYTLYFNGIKLTDESKISLQTMIDEVSQRDKPYMQIIGHTDT---AGPSE 194

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338
            N  L L RA + Y+++  S +S  +I  +  ++   L I ++   +   NRR++I V
Sbjct: 195 KNKILGLKRAKAVYEMIKNSDISYSKID-VDSYSESNLAIKTEDETVEQLNRRVEIFV 251


>gi|288940580|ref|YP_003442820.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288895952|gb|ADC61788.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
          Length = 193

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           +   E IS+ GHTDA   +     N++L L RA +    ++  G+S   I  +       
Sbjct: 116 SEVQERISLTGHTDA---KGSDAYNYQLGLRRAQAVQDYMISRGISPQDIVSVESRGKSD 172

Query: 320 LKIASDPMNSANRRIDI 336
           +    D  +   RR+ I
Sbjct: 173 MLPGVDIYSVEQRRVRI 189


>gi|313157808|gb|EFR57219.1| OmpA family protein [Alistipes sp. HGB5]
          Length = 376

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 10/109 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           R    F   SS         +  + E L  + E  + I G+ DA         N ++S  
Sbjct: 274 RENIFFRIGSSQIRTTEEAKVGALVEYLKANPEANVEIVGYADA--ATGSHAVNLKISKL 331

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
           RA S    L K+G++  RIS   G     +      P    N R+ I +
Sbjct: 332 RAESVAAALKKAGIAASRISA-EGRGDTAQPF----PGVEKN-RVSICI 374


>gi|120611464|ref|YP_971142.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120589928|gb|ABM33368.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
          Length = 177

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 10/115 (8%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            + +        F    +    +    +  +   +      + I G  DA+     A  N
Sbjct: 69  RVVVDGSVVKFYFASGRADLTADAAPAIADVVRAVKDGNRRVVISGFHDAT---GDAAAN 125

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILV 338
             L+  RA +    L+ +G  EDRI         +      D   +  RR+++ +
Sbjct: 126 AGLAKQRAQAVRDALVAAGAPEDRIEL------RKPELAQGDGNAAEARRVEVTL 174


>gi|53721933|ref|YP_110918.1| OmpA family protein [Burkholderia pseudomallei K96243]
 gi|121596633|ref|YP_989916.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           mallei SAVP1]
 gi|124383233|ref|YP_001024397.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           mallei NCTC 10229]
 gi|126443869|ref|YP_001062318.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126447564|ref|YP_001078178.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           mallei NCTC 10247]
 gi|126456472|ref|YP_001075283.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|134279076|ref|ZP_01765789.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|167723261|ref|ZP_02406497.1| ompA family protein [Burkholderia pseudomallei DM98]
 gi|167742230|ref|ZP_02415004.1| ompA family protein [Burkholderia pseudomallei 14]
 gi|167819406|ref|ZP_02451086.1| ompA family protein [Burkholderia pseudomallei 91]
 gi|167827777|ref|ZP_02459248.1| ompA family protein [Burkholderia pseudomallei 9]
 gi|167849251|ref|ZP_02474759.1| ompA family protein [Burkholderia pseudomallei B7210]
 gi|167897853|ref|ZP_02485255.1| ompA family protein [Burkholderia pseudomallei 7894]
 gi|167906193|ref|ZP_02493398.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
 gi|167914516|ref|ZP_02501607.1| ompA family protein [Burkholderia pseudomallei 112]
 gi|167922410|ref|ZP_02509501.1| ompA family protein [Burkholderia pseudomallei BCC215]
 gi|217418937|ref|ZP_03450444.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|226197635|ref|ZP_03793210.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|237509538|ref|ZP_04522253.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|242311390|ref|ZP_04810407.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254174141|ref|ZP_04880803.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei ATCC 10399]
 gi|254183366|ref|ZP_04889958.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|254193146|ref|ZP_04899581.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|254263683|ref|ZP_04954548.1| ompA family protein [Burkholderia pseudomallei 1710a]
 gi|254300263|ref|ZP_04967709.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|254357001|ref|ZP_04973276.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei 2002721280]
 gi|52212347|emb|CAH38371.1| OmpA family protein [Burkholderia pseudomallei K96243]
 gi|121224431|gb|ABM47962.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei SAVP1]
 gi|124291253|gb|ABN00523.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei NCTC 10229]
 gi|126223360|gb|ABN86865.1| ompA family protein [Burkholderia pseudomallei 668]
 gi|126230240|gb|ABN93653.1| ompA family protein [Burkholderia pseudomallei 1106a]
 gi|126240418|gb|ABO03530.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei NCTC 10247]
 gi|134249495|gb|EBA49576.1| ompA family protein [Burkholderia pseudomallei 305]
 gi|148026028|gb|EDK84151.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei 2002721280]
 gi|157810253|gb|EDO87423.1| ompA family protein [Burkholderia pseudomallei 406e]
 gi|160695187|gb|EDP85157.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           mallei ATCC 10399]
 gi|169649900|gb|EDS82593.1| ompA family protein [Burkholderia pseudomallei S13]
 gi|184213899|gb|EDU10942.1| ompA family protein [Burkholderia pseudomallei 1655]
 gi|217398241|gb|EEC38256.1| ompA family protein [Burkholderia pseudomallei 576]
 gi|225930244|gb|EEH26256.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
 gi|235001743|gb|EEP51167.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
 gi|242134629|gb|EES21032.1| ompA family protein [Burkholderia pseudomallei 1106b]
 gi|254214685|gb|EET04070.1| ompA family protein [Burkholderia pseudomallei 1710a]
          Length = 276

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 158 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 214

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336
            RA +    L   G+  D I    G        ++                +RR+ I
Sbjct: 215 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 269


>gi|15891235|ref|NP_356907.1| omp16 protein [Agrobacterium tumefaciens str. C58]
 gi|22653886|sp|Q8U9L5|OMP16_AGRT5 RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
           Precursor
 gi|15159600|gb|AAK89692.1| omp16 protein [Agrobacterium tumefaciens str. C58]
          Length = 177

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    LQ+  + L+      I++ GH D          N  L   R
Sbjct: 68  DRIFFDTDSTSIRADAQQTLQRQAQWLSRYPNYAITVEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L   GV   R+  IS +   +           S NRR
Sbjct: 125 AAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNRR 167


>gi|254409577|ref|ZP_05023358.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
 gi|196183574|gb|EDX78557.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
          Length = 510

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 76/299 (25%), Gaps = 20/299 (6%)

Query: 57  TDDDTKKA---IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
                K+    +    +     +          ++ PE+ S+          +       
Sbjct: 215 VTQAKKQGHTVVLSSQDAPQAIVDVIVASNRLIESQPEKISELLEAYYRRIDVNVREPSQ 274

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
                 +  +    E +         +         D+   K +  +  +     +  + 
Sbjct: 275 LKTQIAEDGELSSSEASAVLQGIDFFTASEAQQWMSDNILEKRIGSTAAVLVLAGRLNDV 334

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGI 224
              P S      + +     +    +    +  +AD +            V  +      
Sbjct: 335 PQAPQSLFSPQFLTKAATNTETLISLVRADNPELADRLSGKGETVAAVPQVSAQQITAAP 394

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIA 281
            I  ++ R    F   S+    +    L ++   +           + GHT  +     A
Sbjct: 395 DIGNLEVRGEVKFGVGSATLTSQGQQTLNQLTNEIQEFNPQTLAVRVIGHTSKT---GAA 451

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             N  LS  RA      L   G+  +      G   ++      P +   +R +I +  
Sbjct: 452 TLNQTLSQQRAQVVVNYLKNRGLKHN--FVAEGKGFNQPLSGIPPTDPRQQRTEIRLVR 508


>gi|84500927|ref|ZP_00999162.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
 gi|84390994|gb|EAQ03412.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
          Length = 153

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRL 287
            D+     F    S    +    L +   +    +  V+ + G+ D       A  N  L
Sbjct: 44  QDEGLQVYFPSGVSSLSQQAAAKLDRAARLYRDGNPIVMIVSGNADTV---GSAAANLDL 100

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337
           SL RA +    L+  G+  DR+ ++ G  +  L +   +   NS NR + I 
Sbjct: 101 SLRRARTVASGLVSRGIPIDRL-QVVGRGNSELPVPTENGVANSENRSVSIT 151


>gi|62317017|ref|YP_222870.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
 gi|83269011|ref|YP_418302.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
           2308]
 gi|189022284|ref|YP_001932025.1| outer membrane protein OprF [Brucella abortus S19]
 gi|254691499|ref|ZP_05154753.1| outer membrane protein OprF [Brucella abortus bv. 6 str. 870]
 gi|254698304|ref|ZP_05160132.1| outer membrane protein OprF [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731746|ref|ZP_05190324.1| outer membrane protein OprF [Brucella abortus bv. 4 str. 292]
 gi|256256684|ref|ZP_05462220.1| outer membrane protein OprF [Brucella abortus bv. 9 str. C68]
 gi|260544253|ref|ZP_05820074.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
 gi|260757119|ref|ZP_05869467.1| TraQ protein [Brucella abortus bv. 6 str. 870]
 gi|260759511|ref|ZP_05871859.1| TraQ protein [Brucella abortus bv. 4 str. 292]
 gi|260762755|ref|ZP_05875087.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882929|ref|ZP_05894543.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|297250039|ref|ZP_06933740.1| type IV secretion system outer membrane lipoprotein [Brucella
           abortus bv. 5 str. B3196]
 gi|123545549|sp|Q2YJ83|YP57_BRUA2 RecName: Full=Type IV secretion system putative outer membrane
           lipoprotein BAB2_0057; Flags: Precursor
 gi|148841383|sp|P0C536|YN58_BRUAB RecName: Full=Type IV secretion system putative outer membrane
           lipoprotein BruAb2_0058; Flags: Precursor
 gi|8163895|gb|AAF73905.1|AF226278_12 unknown [Brucella abortus]
 gi|62197210|gb|AAX75509.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
 gi|82939285|emb|CAJ12223.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
           2308]
 gi|189020858|gb|ACD73579.1| outer membrane protein OprF [Brucella abortus S19]
 gi|260097524|gb|EEW81398.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
 gi|260669829|gb|EEX56769.1| TraQ protein [Brucella abortus bv. 4 str. 292]
 gi|260673176|gb|EEX59997.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677227|gb|EEX64048.1| TraQ protein [Brucella abortus bv. 6 str. 870]
 gi|260872457|gb|EEX79526.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|297173908|gb|EFH33272.1| type IV secretion system outer membrane lipoprotein [Brucella
           abortus bv. 5 str. B3196]
          Length = 172

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q     F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 61  RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582]
 gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582]
          Length = 352

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 232 RNTPMFDKSSSIPLPETI---VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
           ++  MF  +S+   P+       L    E+ +   +   + G++D       A  N +LS
Sbjct: 228 KSDVMFGYNSAELSPQGQAAVRDLYNRPEIQSAKNQTTMVIGYSDRI---GSADYNQQLS 284

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337
             RA +    L+  G+    +    G         +        S        +RR+ + 
Sbjct: 285 SRRAQAVADELIGLGMPAANVQA-QGRGASESVTGTQCDGISARSQRIDCLAPDRRVVVE 343

Query: 338 V 338
           +
Sbjct: 344 I 344


>gi|153010830|ref|YP_001372044.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562718|gb|ABS16215.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 742

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 10/106 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           F   S+         L+K+   +         E   I GHTDA       R N  LS  R
Sbjct: 628 FATGSAEVSLSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAV---GSDRSNLVLSDKR 684

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           A S   +L +   +  + +    G+    LKI +      NRR+ I
Sbjct: 685 AESVASLLTEVYEIPPENLVT-QGYGERFLKIRTQAAEQENRRVTI 729


>gi|126731139|ref|ZP_01746947.1| hypothetical protein SSE37_21910 [Sagittula stellata E-37]
 gi|126708441|gb|EBA07499.1| hypothetical protein SSE37_21910 [Sagittula stellata E-37]
          Length = 242

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 54/201 (26%), Gaps = 8/201 (3%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
            +         +     L +      +         P  +  +    + +     L    
Sbjct: 28  GDDSALPDDTAARPTSALARCLASPDAATCAGATVDPSGAMNESAVPQVQFETLVLDLDQ 87

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
               S                     +++     T  FD  S+    +    L  +   L
Sbjct: 88  KKVTSTAAPPAAAPNYAAPQPAAHGTVALPSVAVTIEFDFDSANIRGDQFGKLTALVAAL 147

Query: 260 AHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           +         ++ GHTDA         N  LS  RA S    L  + V+        GF 
Sbjct: 148 SDPALAGTSYAVIGHTDA---SGSEGYNCDLSRRRAASVAGALNAAYVTLP--LYPVGFG 202

Query: 317 HHRLKIASDPMNSANRRIDIL 337
            H LK   DP    NRR+  +
Sbjct: 203 EHVLKNVYDPRAPENRRVTFM 223


>gi|312959245|ref|ZP_07773763.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311286505|gb|EFQ65068.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 302

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I E +        I + GH+D          N  +S  RA +
Sbjct: 178 FPGGGIELDAAAKQKLAVIIEFMKADPTVNHIELNGHSDN---SGNRLSNRDVSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
                  +G+ E +I  +         + +
Sbjct: 235 VMDYFKANGIQESQI-TLRFHGESYPLVPN 263


>gi|306845321|ref|ZP_07477896.1| lipoprotein [Brucella sp. BO1]
 gi|306274237|gb|EFM56049.1| lipoprotein [Brucella sp. BO1]
          Length = 129

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q  +  F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 18  RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPTPGDT---Q 73

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 74  VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 129


>gi|296156854|ref|ZP_06839691.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
 gi|295892740|gb|EFG72521.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
          Length = 558

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 15/113 (13%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S+   P++   L  +   L A       I G+TD+         N +L+  RA 
Sbjct: 456 VFFAVGSASLDPQSAEALAGVARRLLAAPGSRAVISGYTDS---SGTYEANVKLAAARAA 512

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVEDRQG 343
           +    L+ +GV   RI         R      +  P  S  RR+D+ +    G
Sbjct: 513 TVRSALVVAGVDVARIDM------RRPARIVASDAPDRS--RRVDVTLAPSTG 557


>gi|298386442|ref|ZP_06995998.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|298260819|gb|EFI03687.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 363

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V +      + E  +    + I   +    F  +S+    +    +  + E L  + 
Sbjct: 233 EPVVTEQPKPTPVAEKPQPKKEVVIEPMKQNIFFAINSAKIQDDQQAKIASLVEYLEKNA 292

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321
              +S+ G+ D       AR N +LS  RA +  + L   G++ DRI  ++      +  
Sbjct: 293 TAKVSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY 349

Query: 322 IASDPMNSANRRIDILV 338
             + P      R+ I +
Sbjct: 350 --NTPEE---NRVSICI 361


>gi|91201947|emb|CAJ75007.1| similar to H+-driven flagellar motor component MotB [Candidatus
           Kuenenia stuttgartiensis]
          Length = 230

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD-ASPFRNIARDNWRLSLDRAYSA 295
           F +  +    E +  L  +  + A    ++ + GHT  A         +W+LS+DRA + 
Sbjct: 124 FKEHGATLSLEGMHSLNNLVNLTADRPVLLMVEGHTRVAFKPSKDYETSWKLSVDRARAV 183

Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
              L + G +S  R+  + G  ++   + S   +  N R+ I+++ 
Sbjct: 184 ADYLHEKGNISHKRLITV-GHGNNNSFVKSPGGDRFNDRVSIIIKK 228


>gi|300870375|ref|YP_003785246.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli
           95/1000]
 gi|300688074|gb|ADK30745.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Brachyspira pilosicoli 95/1000]
          Length = 202

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 9/161 (5%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             M   +  + +A  +      +     +      + R      + +     +F  + + 
Sbjct: 25  PEMAPAENAEPVALAVQEEPQAVANTGELYLPQGTSIRDSQRGRVFETNPKIIFGFAKTT 84

Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
                 V   ++ E L  +  V   + GHT           N+ LS++R  +A   L+ +
Sbjct: 85  MPANANVAFAQVIEFLDKNPNVRLVVEGHTSNKGI--AYPYNYNLSVNRVKNARAYLVNN 142

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSAN-RRIDILVEDRQ 342
           GV  +R+ +             +    AN RR + ++ + Q
Sbjct: 143 GVDANRLIE-KPLGEALP----ESNVQANLRRYEFIIIENQ 178


>gi|110678301|ref|YP_681308.1| OmpA family domain-containing protein [Roseobacter denitrificans
           OCh 114]
 gi|109454417|gb|ABG30622.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
          Length = 319

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +S   P     L+++ + L       +++ GHTDA+        N  LS  RA S 
Sbjct: 214 FSVGTSDLGPGPFSALKELSDFLTRSQDMRVALVGHTDAT---GTLAANISLSRARARSV 270

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L++  GVS D++    G  +     ++        NRR+++++ + Q
Sbjct: 271 RSRLIETYGVSPDQVDA-EGMGYLAPIASNLTEEGRRLNRRVEVVLLNTQ 319


>gi|319902016|ref|YP_004161744.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319417047|gb|ADV44158.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 404

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 16/160 (10%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            + K K  ++ + K +   +           V            + D  N   F+   + 
Sbjct: 245 KSKKVKPEIRYVEKVVEKIIEKPTI------VEKVVQAPPHANVLCDLFNNIYFEFDKAD 298

Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              +++ ++ KI +++   T     I G TDA   +   + N  LS  RA +  + L + 
Sbjct: 299 ITEKSVSIINKIAQIMMTDTNKRYLITGCTDA---KGSLQYNMGLSQRRANAVIKALTQQ 355

Query: 303 GVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337
           GV  + + K  G      +  + AS+ +   +R+  ++I+
Sbjct: 356 GVPSE-MLKSRGVGKKISYAPQDASNEIREGDRKIIVEII 394


>gi|271962882|ref|YP_003337078.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Streptosporangium roseum DSM
           43021]
 gi|270506057|gb|ACZ84335.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Streptosporangium roseum DSM
           43021]
          Length = 535

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 12/102 (11%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F  + +   P +  VL +  +++  S    I++ GH D+         N  LS  R
Sbjct: 264 SDVLFALNRADLTPRSRAVLTRTAKLIDTSEGATITVEGHADS---SGTDAINDPLSQRR 320

Query: 292 AYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           A +  +     L ++GV      +  G+   R    ++    
Sbjct: 321 AQAVQRALSGLLTRTGV----RFQAKGYGSRRPLYGNEDEEG 358


>gi|218510720|ref|ZP_03508598.1| probable outer membrane lipoprotein [Rhizobium etli Brasil 5]
 gi|218517107|ref|ZP_03513947.1| probable outer membrane lipoprotein [Rhizobium etli 8C-3]
          Length = 178

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L      L  +   +  ++G  D       A     
Sbjct: 62  ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADD---SGSASKMQT 118

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167


>gi|303252130|ref|ZP_07338298.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307247466|ref|ZP_07529511.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648913|gb|EFL79101.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306855969|gb|EFM88127.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 283

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 243 IPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
               +   V+  +   L  S  E + + G+TD        + N  LS  RA      L++
Sbjct: 151 TLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRRANMVKARLVQ 207

Query: 302 SGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----LVEDRQG 343
            GV+ + I+ + G+   +   A D  P           NRR+++     +++  +G
Sbjct: 208 QGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGVLKQNEG 261


>gi|305665203|ref|YP_003861490.1| OmpA family protein [Maribacter sp. HTCC2170]
 gi|88709956|gb|EAR02188.1| OmpA family protein [Maribacter sp. HTCC2170]
          Length = 640

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     FD+  S    +    L K+ + +    +  ++I  HT++   +   R N +LS 
Sbjct: 523 KIQKFYFDRGKSNITLKIKTELDKVVDAVQRFPQLKLTIESHTNS---KGSKRSNQQLSQ 579

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            R+ +    L  +G+S   I  + G+   +L  
Sbjct: 580 RRSEAIKTYLTTNGLSSANIKAV-GYGEEKLVN 611


>gi|148558474|ref|YP_001257134.1| putative lipoprotein [Brucella ovis ATCC 25840]
 gi|163844256|ref|YP_001621911.1| hypothetical protein BSUIS_B0062 [Brucella suis ATCC 23445]
 gi|254699373|ref|ZP_05161201.1| hypothetical protein Bsuib55_00717 [Brucella suis bv. 5 str. 513]
 gi|254706382|ref|ZP_05168210.1| hypothetical protein BpinM_05165 [Brucella pinnipedialis
           M163/99/10]
 gi|254711327|ref|ZP_05173138.1| hypothetical protein BpinB_13940 [Brucella pinnipedialis B2/94]
 gi|254711926|ref|ZP_05173737.1| hypothetical protein BcetM6_00730 [Brucella ceti M644/93/1]
 gi|254714996|ref|ZP_05176807.1| hypothetical protein BcetM_00740 [Brucella ceti M13/05/1]
 gi|256014854|ref|YP_003104863.1| lipoprotein, putative [Brucella microti CCM 4915]
 gi|256030043|ref|ZP_05443657.1| hypothetical protein BpinM2_05215 [Brucella pinnipedialis
           M292/94/1]
 gi|256059695|ref|ZP_05449890.1| hypothetical protein Bneo5_05015 [Brucella neotomae 5K33]
 gi|256158216|ref|ZP_05456125.1| hypothetical protein BcetM4_05150 [Brucella ceti M490/95/1]
 gi|256252843|ref|ZP_05458379.1| hypothetical protein BcetB_00720 [Brucella ceti B1/94]
 gi|260166906|ref|ZP_05753717.1| lipoprotein, putative [Brucella sp. F5/99]
 gi|261216699|ref|ZP_05930980.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261219930|ref|ZP_05934211.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261313828|ref|ZP_05953025.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261318931|ref|ZP_05958128.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319567|ref|ZP_05958764.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261323667|ref|ZP_05962864.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261749823|ref|ZP_05993532.1| TraQ protein [Brucella suis bv. 5 str. 513]
 gi|261756291|ref|ZP_06000000.1| outer membrane protein OprF [Brucella sp. F5/99]
 gi|265987066|ref|ZP_06099623.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996727|ref|ZP_06109284.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|148369759|gb|ABQ62631.1| putative lipoprotein [Brucella ovis ATCC 25840]
 gi|163674979|gb|ABY39089.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255997514|gb|ACU49201.1| lipoprotein, putative [Brucella microti CCM 4915]
 gi|260918514|gb|EEX85167.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260921788|gb|EEX88356.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292257|gb|EEX95753.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298154|gb|EEY01651.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261299647|gb|EEY03144.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261302854|gb|EEY06351.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261736275|gb|EEY24271.1| outer membrane protein OprF [Brucella sp. F5/99]
 gi|261739576|gb|EEY27502.1| TraQ protein [Brucella suis bv. 5 str. 513]
 gi|262551024|gb|EEZ07185.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659263|gb|EEZ29524.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 172

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q  +  F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 61  RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   RI+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|218461533|ref|ZP_03501624.1| probable outer membrane lipoprotein [Rhizobium etli Kim 5]
          Length = 175

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L    + L  +   +  ++G  D             
Sbjct: 59  ILNVGRRIYFKQDSAALDSVAMATLDSQADWLNKNPTWLLKLQGFADD---SGSTSKMQT 115

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 116 LSQKRAEAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 164


>gi|119470188|ref|ZP_01612954.1| Outer membrane protein [Alteromonadales bacterium TW-7]
 gi|119446609|gb|EAW27883.1| Outer membrane protein [Alteromonadales bacterium TW-7]
          Length = 284

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +    P+  V L +  +++     +  +  GHTD+         N+ L+L RA + 
Sbjct: 155 FAFKAFEITPKYAVRLAQAADLVKELESISILLVGHTDSM---GEMASNYELALKRAETV 211

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDRQ 342
              L+  GV    I+ ++     +       +D +  ++RR++ +V D  
Sbjct: 212 KHWLVVYGVPVQSITTLT-QGSLKPYSDEPQTDSVRHSDRRVEAIVLDAN 260


>gi|317481533|ref|ZP_07940589.1| OmpA family protein [Bacteroides sp. 4_1_36]
 gi|316902303|gb|EFV24201.1| OmpA family protein [Bacteroides sp. 4_1_36]
          Length = 170

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 7/145 (4%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
           P    ++        R +    +  + L+             +     + +         
Sbjct: 17  PVSKIDEDAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEV---AGPRAI 73

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294
            F   S+       V ++   ++L  + +    + G+ D       A  N +LS  RA  
Sbjct: 74  FFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSASWNQKLSEKRAQV 131

Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319
            Y  L+  GV +D++  + GF    
Sbjct: 132 VYDALIAQGVDKDQLELV-GFGGTE 155


>gi|269958634|ref|YP_003328421.1| putative outer membrane protein OmpA [Anaplasma centrale str.
           Israel]
 gi|269848463|gb|ACZ49107.1| putative outer membrane protein OmpA [Anaplasma centrale str.
           Israel]
          Length = 212

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
           +     FD +          VL  + E +       + I GHTD+         N  L  
Sbjct: 40  RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKMSTLLIVGHTDSR---GTEEYNLALGE 96

Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339
            RA +  + ++     +S    ++  G A    L  +SD       ++ NRR+ +++E
Sbjct: 97  RRANAVKEFILGCDRSLSPRISTQSRGKAEPEILVYSSDFKEAEKAHAQNRRVVLIME 154


>gi|167561407|ref|ZP_02354323.1| cytochrome c oxidase, subunit II [Burkholderia oklahomensis EO147]
          Length = 505

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 19/152 (12%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           + + +A   +  L    A             +G             F+   S    +   
Sbjct: 363 QPKQVADARNGKLPEDAAQQAGDTAAPVAEASGAAAQAQALPAEIYFETGKSELPADAKD 422

Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +    E +    +  +++ G TD +        N  L+  RA +    L  +G++E+RI
Sbjct: 423 AIAAAAEYVKAHPDAKLALSGFTDKTGSAGA---NAELAKRRAQAVRDALKAAGIAEERI 479

Query: 310 S-----KISGFAHHRLKIASDPMNSANRRIDI 336
                  I+G A  +         +  RR++I
Sbjct: 480 ILKKPETITGGADAK--------EA--RRVEI 501


>gi|313887383|ref|ZP_07821073.1| outer membrane protein 41 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923151|gb|EFR33970.1| outer membrane protein 41 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 387

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
              T +F   SS      ++ L  + E +  +   I + G+TD +     A  N  LS  
Sbjct: 285 SDKTILFKFDSSRIDKNQMITLYNVSEYVKANNTPILVIGYTDTT---GDANYNLGLSER 341

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           RA +    L+   GVS D +              +   N    R+ I+
Sbjct: 342 RAKAVANALINDFGVSAD-MITTQWEGATDKLFDTKSWN----RVVII 384


>gi|254449145|ref|ZP_05062596.1| OmpA family protein [gamma proteobacterium HTCC5015]
 gi|198261259|gb|EDY85553.1| OmpA family protein [gamma proteobacterium HTCC5015]
          Length = 397

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 81/276 (29%), Gaps = 18/276 (6%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P          G FD         +  +      + + + +   + +      +  L +
Sbjct: 134 RPIQVYARDNKSGTFDTFKSLVLGKKATLASRAKRYESNDQLSDDVAADLNGIGFTGLPS 193

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +         L  +     +    +      N   +  L     + + + K +
Sbjct: 194 VRRSKPLAIAEGDNTPILPSELSVATEDYPLSRRLFLYNPFNDEPLLRDLVQFVKSQKGQ 253

Query: 190 KRLQD---LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +++     +++ I+    G+ +               + ++         F         
Sbjct: 254 QQVAKVGFISQNIAPYEVGVDSRAPSNYKATVQGAERLSLNFR-------FKPREYQLDN 306

Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           + +  + ++ + L  + +   +  G +DA+           LS++R+      L+K G+ 
Sbjct: 307 KALQDVDRLVDFLQKNPQYKVVLAGFSDAAEEAAWRSY--ILSMERSDFVANQLIKKGIV 364

Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
                 + GF       ++        NRR+++ V 
Sbjct: 365 PS---VVRGFGSTLQVASNHSEKGRDKNRRVEVWVR 397


>gi|332300804|ref|YP_004442725.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|57918612|gb|AAW59418.1| outer membrane protein HMP [Porphyromonas asaccharolytica DSM
           20707]
 gi|332177867|gb|AEE13557.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 387

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
              T +F   SS      ++ L  + E +  +   I + G+TD +     A  N  LS  
Sbjct: 285 SDKTILFKFDSSRIDKNQMITLYNVSEYVKANNTPILVIGYTDTT---GDANYNLGLSER 341

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           RA +    L+   GVS D +              +   N    R+ I+
Sbjct: 342 RAKAVANALINDFGVSAD-MITTQWEGATDKLFDTKSWN----RVVII 384


>gi|167009214|ref|ZP_02274145.1| probable OmpA family protein [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 206

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S   + +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 69  MNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160


>gi|89255762|ref|YP_513124.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314256|ref|YP_762979.1| OmpA family protein [Francisella tularensis subsp. holarctica
           OSU18]
 gi|169656514|ref|YP_001427790.2| OmpA family peptidoglycan-associated lipoprotein [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|254367132|ref|ZP_04983165.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|89143593|emb|CAJ78776.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129155|gb|ABI82342.1| probable OmpA family protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134252955|gb|EBA52049.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|164551582|gb|ABU60834.2| peptidoglycan-associated lipoprotein, OmpA family [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 207

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286
           +     +  F   S   + +    L K  + L    +  I + G+TD        + N+ 
Sbjct: 70  MNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
           L   RA + Y  L+   V++D+I  +S +   +   
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161


>gi|83953282|ref|ZP_00962004.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83842250|gb|EAP81418.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 317

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 14/191 (7%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           KG            ++  +      + +           + ++A+   +      A +  
Sbjct: 134 KGSLQSPDAVATLLVSTTDTSAYLQIVEADAQGQASSPSVPEVAEDTQALAPDAPAQSQS 193

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271
           +          ++++ +D      F   ++         L  +  VL    ++  +  GH
Sbjct: 194 EMAAALQNTGHVVLAALD------FGTGTAALGQGEFDALANLAAVLKDQPDLRIVLVGH 247

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           TD+       ++N  LS  RA +  + L+   G++ DRI    G  +     ++      
Sbjct: 248 TDSV---GGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEA-QGMGYLSPIASNQTKAGR 303

Query: 331 --NRRIDILVE 339
             NRR++ ++ 
Sbjct: 304 DANRRVEAVLL 314


>gi|300728041|ref|ZP_07061414.1| putative outer membrane protein [Prevotella bryantii B14]
 gi|299774643|gb|EFI71262.1| putative outer membrane protein [Prevotella bryantii B14]
          Length = 410

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S     +    L  + E+L    +V  SI G+   +     A  N RL+  RA + 
Sbjct: 312 FAHNSHRLTQKEADKLNAVAEMLKAQPDVTLSINGYASDT---GSAGYNLRLTQLRADTV 368

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
             +L + G+   R+  + G    R K  +       RR+++++ ++
Sbjct: 369 KMLLKRLGIDGHRLHPVIGKGIDR-KAPTGKEA---RRVELMMNEK 410


>gi|238028705|ref|YP_002912936.1| cytochrome c oxidase subunit II [Burkholderia glumae BGR1]
 gi|237877899|gb|ACR30232.1| Cytochrome c oxidase, subunit II [Burkholderia glumae BGR1]
          Length = 555

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 19/108 (17%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S    +    L       +   +  +++ G TD +     A  N  L+  RA 
Sbjct: 457 VYFDTGKSELPADAKAALDAAARYASAHPDAKLALSGFTDTT---GSADANAELAKRRAQ 513

Query: 294 SAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           +    L  +G++EDRI       I+G A               RR++I
Sbjct: 514 AVRDALKAAGIAEDRIVLKKPQTITGGAD----------AGQARRVEI 551


>gi|163755163|ref|ZP_02162283.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
           algicida OT-1]
 gi|161324583|gb|EDP95912.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
           algicida OT-1]
          Length = 139

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            +S     E+  +L  +  ++ +S     ++ H+     R    DN   +  RA    + 
Sbjct: 40  SASLELKKESFKILDTLAVIIKNSNASYMVKSHST---LRGKQEDNLVKTQKRAEIIKEE 96

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           L+  GV   R+    GF        +     +  N RI+I+
Sbjct: 97  LINRGVDSTRLIA-KGFGETDRIYHTPTRIGDMKNDRIEIV 136


>gi|149377601|ref|ZP_01895340.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
 gi|149358143|gb|EDM46626.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Marinobacter algicola DG893]
          Length = 148

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +  +      + + +L++    L H+    + I GH D      ++  N  LS  RA SA
Sbjct: 42  YGFNKHRLDEQDLAILRQHALYLRHNPGVTVRIHGHADNF---GVSEYNHFLSRLRASSA 98

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +VL++ GV E ++  +SG+   R     +  ++ANRR+++
Sbjct: 99  AKVLIREGVRESQVL-VSGWGSDRPLARPE-DHAANRRLEL 137


>gi|89891400|ref|ZP_01202906.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
 gi|89516431|gb|EAS19092.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
          Length = 486

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           I +      F  +S+ P   ++  +  +   +  +     ++ G+ D          N  
Sbjct: 377 INEGYVNVYFQFNSTKPALYSLGAINTLVTYMKDNPNATATLTGYADEL---GSPAYNKN 433

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
           LS  RA   + VL+ SGV   R+S  +G         +        RR+   V
Sbjct: 434 LSDRRAKMVHDVLVASGVDASRLSH-NGDGEDASVDKNSSEARQLVRRVTFRV 485


>gi|262382901|ref|ZP_06076038.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
 gi|262295779|gb|EEY83710.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
          Length = 389

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-----SIIDQR---NT 234
              ++  + +  L  +I+  L     +   + V         +I        +     N 
Sbjct: 230 EAELRNPQEIDALNSRINE-LYAQNQELAQRPVDCPDCPEPEVITEKVVEFEENPLINNV 288

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F  + +   P   V +  I + L  + +    + G+TD       ++ N +LS +RA 
Sbjct: 289 VLFKINQTKVDPYQGVNIYNIAQYLKDNPQFKVRVIGYTDRK--TGTSQINEKLSAERAQ 346

Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRL 320
           +  ++L+   G+S DR+  +        
Sbjct: 347 NVARILISDYGISRDRVI-VEWVGDKEP 373


>gi|56694983|ref|YP_165329.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56676720|gb|AAV93386.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
          Length = 518

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +   LA  I++  + +    + + V   +    + +S         F+  SS P  ++  
Sbjct: 372 QGNRLANAIAAAGTEVPLTELQRLVSTLSGMQRLSLSFR-------FETGSSRPDAQSRT 424

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSEDR 308
            + ++ + L               S     A  N R++L RA +    +      +   R
Sbjct: 425 NISQLAQELESGAYDARQLLFVGFSDGDGAAEGNTRIALKRAEAVRDAVLQTAETLDPAR 484

Query: 309 I-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +   +  F         D       NRR+++ V+
Sbjct: 485 VEVSVDAFGEALPMACDDSDWGRQVNRRVEVWVK 518


>gi|288817919|ref|YP_003432266.1| peptidoglycan associated lipoprotein [Hydrogenobacter thermophilus
           TK-6]
 gi|288787318|dbj|BAI69065.1| peptidoglycan associated lipoprotein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751517|gb|ADO45000.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6]
          Length = 218

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 5/157 (3%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D      K+    L   ++    A +   +  DL  ++S  L G+V D+  +    E+  
Sbjct: 46  DAIIEAKKKSEEALNKANEALGKANEALNKANDLEGRVSK-LEGIVDDHEKRIKALESRE 104

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
                  +++     FD             L  I   +   T  + I G  D       +
Sbjct: 105 IPKGGWQLEEIGAVYFDFDKFNIKKSQAPKLDDIASKIQSDTREVLIVGFADTR---GSS 161

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           + N+ LS+ RA      L K GV   R+ +I+ +   
Sbjct: 162 KYNFNLSMYRAQIVASYLAKKGVDIGRM-RIASYGKE 197


>gi|150006545|ref|YP_001301289.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
 gi|254881554|ref|ZP_05254264.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
 gi|294778836|ref|ZP_06744253.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|319642938|ref|ZP_07997574.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
 gi|149934969|gb|ABR41667.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
 gi|254834347|gb|EET14656.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
 gi|294447289|gb|EFG15872.1| OmpA family protein [Bacteroides vulgatus PC510]
 gi|317385486|gb|EFV66429.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
          Length = 364

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            + I   +  +  + + + +    +   + I          F    +    E +V +Q +
Sbjct: 235 KEVIKEVVREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISSEGMVNVQLM 285

Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
            + +  +      I G  D       A  N  LS  RA + Y  L+  GV E ++ K++ 
Sbjct: 286 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 342

Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337
                     D M   N   R+ IL
Sbjct: 343 MGGT------DNMFGKNYLNRVVIL 361


>gi|76818337|ref|YP_337657.1| OmpA family protein [Burkholderia pseudomallei 1710b]
 gi|76582810|gb|ABA52284.1| OmpA family protein [Burkholderia pseudomallei 1710b]
          Length = 252

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 134 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 190

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336
            RA +    L   G+  D I    G        ++                +RR+ I
Sbjct: 191 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 245


>gi|152993089|ref|YP_001358810.1| hypothetical protein SUN_1502 [Sulfurovum sp. NBC37-1]
 gi|151424950|dbj|BAF72453.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 405

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 26/205 (12%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
            + S+  + + +       +    +              K+K +++ L       ++ L 
Sbjct: 191 DQLSDVNETVQEKDKKLLELLNALDEKETKYDTLVENLQKQKAKIKSLTGIKLKVIAALK 250

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE---------- 257
            + +   +  +     + +S     +  +FDK S++   E    L+K  E          
Sbjct: 251 -EALGDKIDIDKKSGSLRLS-----SNILFDKGSAVLKDEAKAQLKKAFEEYIGTLVTNP 304

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM------KSGVSEDRISK 311
            +    + I I GHTD+         N  LS  RA++    L+      K  +    I+ 
Sbjct: 305 KIKPHLDKIIIEGHTDSD---GGYLYNLDLSQRRAFAVMHYLLTLDFAKKYNLQPLMIAS 361

Query: 312 ISGFAHHRLKIASDPMNSANRRIDI 336
              +         +  +++ RRI+I
Sbjct: 362 GRSYLDAIKVNGVEDKDAS-RRIEI 385


>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
 gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
          Length = 327

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +       +FD + S  L      LQ++   L    +  + + G+ DA   +     N
Sbjct: 206 VQLETFSFAIIFDFAKSEVL--LKNDLQQVVTRLNKHPQATVELTGYADA---KGTEAFN 260

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             LS  R       L++ GV  ++I++          I +D       NR + +L+
Sbjct: 261 LTLSKARVKHVSDYLIEQGVKAEQITEHH-LGEAEPVIGNDTDEHRHLNRHVQVLL 315


>gi|327405464|ref|YP_004346302.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320972|gb|AEA45464.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 463

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 12/140 (8%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
            + ++  V    +          + ++  FD + S       +++  + + +  +  ++ 
Sbjct: 1   MNKLIPFVFVLISTFHSNAQDFCKASSVFFDLNKSELKSGGQMMVDSLVKSMNGTDFILE 60

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + G+TD     N    N +LS  R  +    L    ++   I   +          +   
Sbjct: 61  VYGYTDT---SNTLDYNRKLSQSRIDAVLAYLKSKQIAPKEIRTFN-EGEDF----NSSN 112

Query: 328 NSAN----RRIDILVEDRQG 343
            S N    RR+DI +   +G
Sbjct: 113 QSKNAAFQRRVDIYLTPMEG 132


>gi|260429564|ref|ZP_05783541.1| OmpA/MotB [Citreicella sp. SE45]
 gi|260420187|gb|EEX13440.1| OmpA/MotB [Citreicella sp. SE45]
          Length = 517

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 47/164 (28%), Gaps = 12/164 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   LA  I+          +   V        +  S         F+ 
Sbjct: 360 DQAPEELALNLQGDRLANAIAVAEGEGGLALLQHMVTALAPMRRLTTSFR-------FEP 412

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++   +Q++   L               S  +  A  N  ++  RA +    +
Sbjct: 413 GSVRLDAQSRSNVQQLARSLEAGEYDGRELVFVGFSDGQGDADANLEIARKRADAVRTAV 472

Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            ++  +   DRI      F         D +     NRR+++ V
Sbjct: 473 EQAAEAADLDRIGMATEAFGEAMPMACDDTVWGRQVNRRVEVWV 516


>gi|84385694|ref|ZP_00988725.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
 gi|84379674|gb|EAP96526.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
          Length = 187

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 228 IIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           + DQ +  +   +         +    + +  E L    + I I GHTD          N
Sbjct: 76  VFDQESMSLLLNYKTDKHSLTDKHKQAIAQYLE-LVDQDKKIVIEGHTDDI---GSKAYN 131

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339
            +LS  R  SA   L K+    +RI +   F        +  +  +  NRR+ + ++
Sbjct: 132 KKLSQRRTSSATVYLKKNLGLGNRIIE-KAFGESSPICKVEENAASGCNRRVILTIK 187


>gi|312961582|ref|ZP_07776082.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6]
 gi|311284165|gb|EFQ62746.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6]
          Length = 309

 Score = 60.0 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 39/142 (27%), Gaps = 8/142 (5%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIP 244
            + ++ L     ++ +              +            +       F        
Sbjct: 144 AEAERDLAGSRAQVQALSRASKVQQCNSLAMAPVEAAQFKDYALSGDVLFAFGKSGYQDI 203

Query: 245 LPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                + + ++   L       + + + GHTD          N  L L RA +  ++L+ 
Sbjct: 204 SSRGRIAILELITQLNREHAKLDRVEVVGHTDPI---GSYAANQALGLKRAQTVRRLLID 260

Query: 302 SGVSEDRISKISGFAHHRLKIA 323
            G+  + ++  S        + 
Sbjct: 261 GGLPANAVTARSA-GSSEPIVD 281


>gi|294338941|emb|CAZ87285.1| Conserved hypothetical protein; putative OmpA/MotB domain
           [Thiomonas sp. 3As]
          Length = 169

 Score = 60.0 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 11/141 (7%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           SS +    A  +           G  + + +      F    +         L+++ E +
Sbjct: 39  SSAMQAASAPAVASSAAPAADADGARVVVENGVIKFYFASGKADLAAGADAALKQVSEAV 98

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           A     + I G+ DA+     A  N  L+  RA +    L+  GV  DRI+        +
Sbjct: 99  AQ-GHTVVINGYHDAT---GSAALNAELAKKRAMAVRDALVAQGVPADRITL------EK 148

Query: 320 LKIASDPM-NSANRRIDILVE 339
               +     +  RR+++ V+
Sbjct: 149 PAETTGGASAAEARRVEVTVK 169


>gi|119775139|ref|YP_927879.1| OmpA family protein [Shewanella amazonensis SB2B]
 gi|119767639|gb|ABM00210.1| conserved hypothetical OmpA family protein [Shewanella amazonensis
           SB2B]
          Length = 240

 Score = 60.0 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 16/169 (9%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             L     E     ++      LA   + T + L      +         G+ +      
Sbjct: 74  QALATQDAEIERLAQKSANYDALASDYAITRAQLNTLQTAREAKLTELTLGLNVQ----- 128

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F   SS   P     LQ +  V+    + VI ++G  D       +  N  LS  R
Sbjct: 129 ----FKTGSSDIEPHFQNQLQAVARVMEAQPDLVIDLKGFADRR---GDSDYNQALSEQR 181

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
             +    L+ +GV+ DR+ +   F       A     S   +RR+ + +
Sbjct: 182 LANVKAYLVSAGVASDRL-QGKAFGATAPLSADAGFESDFFDRRVTLEL 229


>gi|254463910|ref|ZP_05077321.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
           Y4I]
 gi|206684818|gb|EDZ45300.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
           Y4I]
          Length = 694

 Score = 60.0 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 10/169 (5%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D  +   K     LP +   +                  +       D            
Sbjct: 507 DDTQKAEKVVVNELPQVQDNRRAFSSTGAVSAQDLAAALAAQEAPKVDRRFSLAQVRNID 566

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASP 276
               +  +   ++  FD  S++  P+    L  +G  L    +        I GHTDA  
Sbjct: 567 AVRRLVPVINVDSVNFDTGSAVIRPQEAEELATLGNALRDLIDRNPAEVFLIEGHTDAV- 625

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
               A  N  LS  RA +    L +   V  + +  + G+    L +++
Sbjct: 626 --GAATYNLALSDRRAETVALALTEYFDVPPENMV-VQGYGESDLAVST 671


>gi|330811342|ref|YP_004355804.1| hypothetical protein PSEBR_a4391 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379450|gb|AEA70800.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 325

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 8/98 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F   ++         LQ + + +     V  +   GH+D          N  LS  RA +
Sbjct: 178 FPGEAAELDAHAKAQLQVMLDFIKADPSVNHVELDGHSDN---SGNRLTNRELSRRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
                  +G  E +I  +         + +   N+ANR
Sbjct: 235 VQDFFKANGFQESQI-TLRFHGERYPLVPN--TNAANR 269


>gi|83944241|ref|ZP_00956696.1| OmpA domain protein [Sulfitobacter sp. EE-36]
 gi|83844785|gb|EAP82667.1| OmpA domain protein [Sulfitobacter sp. EE-36]
          Length = 317

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 14/191 (7%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           KG            ++  +      + +           + ++A+   +      A +  
Sbjct: 134 KGSLQSPDAVATLLVSTTDTSAYLQIVEADAQGQASSPSVPEVAEDTRTLAPDAPAQSQS 193

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271
           +          ++++ +D      F   ++         L  +  VL    ++  +  GH
Sbjct: 194 EMAAALQNTGHVVLAALD------FGTGTAALGQGEFDALSNLAAVLKDQPDLRIVLVGH 247

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           TD+       ++N  LS  RA +  + L+   G++ DRI    G  +     ++      
Sbjct: 248 TDSV---GGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEA-QGMGYLSPIASNQTKAGR 303

Query: 331 --NRRIDILVE 339
             NRR++ ++ 
Sbjct: 304 DANRRVEAVLL 314


>gi|294142661|ref|YP_003558639.1| OmpA family protein [Shewanella violacea DSS12]
 gi|293329130|dbj|BAJ03861.1| OmpA family protein [Shewanella violacea DSS12]
          Length = 334

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 5/114 (4%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286
           +  +    +F   SS         L ++  V   +     +  G  D+      A  N +
Sbjct: 216 VEQKSTAVLFGFDSSELSTTAQAKLDEVVRVSKLNDNDTILLIGQADSR---GDAGYNQK 272

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           LS  RA      L+  GV   ++   +         +S    +  RR+ I +  
Sbjct: 273 LSEARAQHVEDYLVSHGVEVQQLGHQAS-GEQDSHASSSQDRAQERRVIITLTS 325


>gi|229588694|ref|YP_002870813.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
 gi|229360560|emb|CAY47417.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
          Length = 302

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 6/90 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  I   +        I + GH+D          N  +S  R  +
Sbjct: 178 FPGGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDN---GGNRLTNRDVSRRRGLA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
               L  +G+ E +I  +           +
Sbjct: 235 VMDYLKANGIPESQI-TLRFHGESYPLAPN 263


>gi|53713209|ref|YP_099201.1| hypothetical protein BF1919 [Bacteroides fragilis YCH46]
 gi|60681476|ref|YP_211620.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|253566878|ref|ZP_04844330.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52216074|dbj|BAD48667.1| hypothetical protein [Bacteroides fragilis YCH46]
 gi|60492910|emb|CAH07686.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|251944441|gb|EES84930.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 399

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + I   +  +V   + K +         +  + D  +   F     +   E+ + L KI 
Sbjct: 247 QYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIH---FAFDKDVITSESEITLDKIA 303

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L         I G+TDA         N  LS  RA + Y  L+K  V    + K  G 
Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GSDNYNIDLSKRRAKAVYSALLKRQV-PQHMLKWRGV 359

Query: 316 A 316
            
Sbjct: 360 G 360


>gi|265763305|ref|ZP_06091873.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255913|gb|EEZ27259.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301162933|emb|CBW22480.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 399

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
           + I   +  +V   + K +         +  + D  +   F     +   E+ + L KI 
Sbjct: 247 QYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIH---FAFDKDVITSESEITLDKIA 303

Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           ++L         I G+TDA         N  LS  RA + Y  L+K  V    + K  G 
Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GSDNYNIDLSKRRAKAVYSALLKRQV-PQHMLKWRGV 359

Query: 316 A 316
            
Sbjct: 360 G 360


>gi|167765326|ref|ZP_02437439.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC
           43183]
 gi|167696954|gb|EDS13533.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC
           43183]
          Length = 391

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282
           +     D  +   F+    +    +   L ++  +L    +    I G+TDA      + 
Sbjct: 267 VEAMACDLLDNIYFEFDKDVLTAASEKTLDRLAGLLKSYPDARFLITGYTDAR---GSSA 323

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR---LKIASDPMNSANRRI 334
            N  LS  RA   Y+ L++ GV    + K  G           A + +   +R++
Sbjct: 324 YNTDLSNRRAKRVYEALLERGVPAA-MLKWHGIGKRASIIPVAAGNSVREGDRKV 377


>gi|153874379|ref|ZP_02002623.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152069157|gb|EDN67377.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 275

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 28/283 (9%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
           N     L+     I      P +    KID       T++    +     Q K       
Sbjct: 6   NFMKLTLLLMVSMILLVSCAPPKKPAPKIDSQKPPSQTQSPT-YQDSPVYQDKMVDTTTL 64

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +   L+ ++ ++    +    S   K L    +     N  E       S       +  
Sbjct: 65  DERVLAQTKPTDDEPYA----SLDTKTLLAKAETLYGNNAYEEALPFFKSAATREDGQLA 120

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN---TPMFDKSSSIP-- 244
           K    L +          A+              + IS+ +        +F+  S+    
Sbjct: 121 KTYAGLYQTQMKLKHQSDAEQA--------FAQLLAISLKESNQLNFRFLFEVGSTEFVN 172

Query: 245 ----LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                 E    L++I +   +      I GH           D  +LSL RA +  Q+++
Sbjct: 173 DQALRTEYSFWLREIAKYFQNRKSCFQIVGH---RGKNEKRNDAQKLSLLRAKAVQQIMI 229

Query: 301 KSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVED 340
               S    SK+ G  +        ++D M++ +RR++I+V D
Sbjct: 230 THSPSITFQSKVLGKGNSENLSGIGSNDVMDTLDRRVEIVVVD 272


>gi|328470528|gb|EGF41439.1| hypothetical protein VP10329_07007 [Vibrio parahaemolyticus 10329]
          Length = 187

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L +  + I + GHTD          N  LSL RA +A + L K     +RI +   F   
Sbjct: 109 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLELGNRIVE-KAFGES 164

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                +  + ++  NRR+ + +E
Sbjct: 165 APICKVNENKLSGCNRRVVLTIE 187


>gi|300023926|ref|YP_003756537.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525747|gb|ADJ24216.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 262

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 5/202 (2%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               +         + L    D       +    L               R +     + 
Sbjct: 30  AQEDDDGPNGETAAELLVDGMDAASDRAYDSARRLFQKLISAFPDSPEAARARRALSSLG 89

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S          ++    E T       +I   +   F +SS+      + +++     L 
Sbjct: 90  SDGDTEEGRAAIRADEAERTAEYRHAFLISVGDRVFFAESSAELGGRALAIIEGQARWLK 149

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI-SKISGFAHH 318
                 I++ G +D        R    LS  RA +    L+ +G+   R+  + +G    
Sbjct: 150 LRPNLTITVIGRSDD---GGDRRSAQTLSKQRAEAVRDRLIAAGLDASRVDLRPTGNDDK 206

Query: 319 RLKIASDPMNSANRRIDILVED 340
               ++    + NR  ++ + D
Sbjct: 207 VAVCSTSMCRAQNRNAEVFIND 228


>gi|330997212|ref|ZP_08321065.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329571007|gb|EGG52714.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 377

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 +S  +  A  + + LQ+  K I+     L      K     T       ++   
Sbjct: 222 AALNATISSMEAEAAGKDRALQNAQKTINDLQKDLNDCKNKKVPTTATQ------TVEKN 275

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
               +F +SSS      +  + ++   L  ++   ++I G+         A+ N +LS  
Sbjct: 276 EYVVIFRQSSSKVDALQMPNIDRLASYLKKNSNAKVTISGYASPE---GNAKFNQKLSEK 332

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFA 316
           RA +   +L+K  G+S +RI    G  
Sbjct: 333 RAEAVKNILVKEYGISANRIET-QGKG 358


>gi|224418309|ref|ZP_03656315.1| putative flagellar motor protein [Helicobacter canadensis MIT
           98-5491]
 gi|253827631|ref|ZP_04870516.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
 gi|253511037|gb|EES89696.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
          Length = 276

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +   +    +     +K +  + +  +    +L   V ++  K          +      
Sbjct: 75  QQADITTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRL------ 128

Query: 231 QRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI--ARDNW 285
                +FD+  +     + I+ L+++  +L    + +   I G+ D    +     +D+ 
Sbjct: 129 -----LFDEEKTAIENADEILFLKRLALILQKMPQTMHLDIIGYADNVEGKPNLKYQDSL 183

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
            LS  RA +  ++L+++ V+  +I+ + G           +    + NRR++ 
Sbjct: 184 GLSALRASNVAKILIENQVNPQKITSLGG-GATNFLLPNTNAENRAQNRRVEF 235


>gi|255263090|ref|ZP_05342432.1| OmpA domain protein [Thalassiobium sp. R2A62]
 gi|255105425|gb|EET48099.1| OmpA domain protein [Thalassiobium sp. R2A62]
          Length = 521

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 65/219 (29%), Gaps = 11/219 (5%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +   ++  +       LT          +  D   +               +   + +  
Sbjct: 304 LTVTADRTRLRTEDYPLTIPLFLYLPQRRLPDAAMAFLNYVRSPEAQRVVRRAGFVDQAG 363

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
               +  +     + ++       +        +L  +     T  F+  S+    ++  
Sbjct: 364 VPTAIKGQGDRLATAILNAGEEVPLTELQRMMRVLGKLERLSMTFRFEVGSTRLDAQSRS 423

Query: 251 VLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA-YQVLMKSGVSE 306
              ++   L    H  + +   G +DA      A +N +LS  RA +   +V +  G +E
Sbjct: 424 NAARMARDLRAGVHRDQRLIFVGFSDAR---GPASENRKLSSARAEAVQRRVNVALGETE 480

Query: 307 --DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
             D   +   F         D       NRR+++ V  R
Sbjct: 481 LSDFTLETEAFGEALPMACDDTEWGRQVNRRVEVWVGPR 519


>gi|228470997|ref|ZP_04055842.1| outer membrane protein HMP [Porphyromonas uenonis 60-3]
 gi|228307394|gb|EEK16408.1| outer membrane protein HMP [Porphyromonas uenonis 60-3]
          Length = 388

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
              T +F   SS      ++ L  + E +      I + G+TD +     A+ N  LS  
Sbjct: 286 SDKTILFKFDSSRIDKNQMITLYNVSEYVKAHNTPILVIGYTDTT---GNAQYNLGLSER 342

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           RA +  + L+   GVS D +              +    + N R+ I+
Sbjct: 343 RAKAVAKALVNDFGVSAD-MITTQWEGATDKLFDTK---AWN-RVVII 385


>gi|190895030|ref|YP_001985323.1| putative outer membrane lipoprotein [Rhizobium etli CIAT 652]
 gi|190700691|gb|ACE94773.1| probable outer membrane lipoprotein [Rhizobium etli CIAT 652]
 gi|327194360|gb|EGE61220.1| putative outer membrane lipoprotein [Rhizobium etli CNPAF512]
          Length = 178

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L      L  +   +  ++G  D             
Sbjct: 62  ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADD---SGSPSKMQT 118

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167


>gi|218259848|ref|ZP_03475401.1| hypothetical protein PRABACTJOHN_01060 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224884|gb|EEC97534.1| hypothetical protein PRABACTJOHN_01060 [Parabacteroides johnsonii
           DSM 18315]
          Length = 403

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 14/154 (9%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-----SIIDQ 231
             +      ++  + +  L  +I+  L     +   + V         +I        D 
Sbjct: 236 KTAAFSEAELRNPQEIDALNSRINE-LYAQNQELAQRPVDCPDCPEPEVITEKVVEFEDN 294

Query: 232 R---NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
               N  +F  + +   P   V +  I + L  + +    + G+TD       ++ N +L
Sbjct: 295 PLINNVVLFKINQTKVDPYQGVNIYNIAQYLKDNPQFKVRVIGYTDRK--TGTSQINEKL 352

Query: 288 SLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRL 320
           S +RA +  ++L+    +S DRI  +        
Sbjct: 353 SAERAQNVARILISDYNISRDRIK-VEWVGDKEP 385


>gi|302879780|ref|YP_003848344.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
           ES-2]
 gi|302582569|gb|ADL56580.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
           ES-2]
          Length = 169

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
            +  +    S        ++Q   + L+        + G+ D          N  L   R
Sbjct: 62  RSVFYPFDVSAVQDADKPLVQAHAKYLSEHANRTVKLEGNCDER---GSNEYNLGLGQRR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336
           A    ++L   G    +++ +S +     K A   +   S NRR D+
Sbjct: 119 ADGVQKMLELGGAKAAQVTSVS-YGEEMPKAAGHDEASWSQNRRTDL 164


>gi|307566204|ref|ZP_07628655.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
 gi|307345097|gb|EFN90483.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
          Length = 230

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 22/214 (10%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           K + + +++       + DL  S+       L  L  +        + L     KI + L
Sbjct: 5   KLAKSDENDSNPFSQSTGDLMASLLFIFILLLSSLMLQVKKQEDSDRALTKNYAKIKTQL 64

Query: 204 SGLVADNIVKGVLF-ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE----- 257
              +       +           +++  Q  + +FD + +   P    +L          
Sbjct: 65  YIDLEHEFKDSLKVWNAVIDSTELAVRFQEPSTLFDYNKTDLKPRFAAILHDFFPRYMAL 124

Query: 258 ----VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI---- 309
                   + E I I GHTD+         N  LS DR  S     +   ++        
Sbjct: 125 LSKPQYKDNIEEIRIEGHTDS---SGGYIYNMELSQDRTRSVLAFCLNQ-ITRKDFEWAK 180

Query: 310 --SKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
                +G +     I          +RR++  + 
Sbjct: 181 YAITANGLSSSHPIIGKDGKEDADRSRRVEFKIR 214


>gi|167616252|ref|ZP_02384887.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           thailandensis Bt4]
 gi|257142822|ref|ZP_05591084.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           thailandensis E264]
          Length = 267

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 19/116 (16%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 149 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTNTYNRQLSL 205

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336
            RA +  + L   G+  + I    G                  +      +RR+ I
Sbjct: 206 ARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGHSAEAIACLAPDRRVRI 260


>gi|93005425|ref|YP_579862.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92393103|gb|ABE74378.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 194

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                +D++SS    E    L   G+ +    + V+ I GH       N    N  LS  
Sbjct: 85  EARAYYDENSSEIKSEYYEQLDNAGKKMQDHLDAVMHIEGHISKREDNNA---NQTLSRY 141

Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS-ANRRI 334
           R       +     +  DRI  I  +   R    +D  NS  N+RI
Sbjct: 142 RVEEIKNYMTMTYNIDPDRIKTIY-YGSERPIATNDAENSWLNQRI 186


>gi|332293191|ref|YP_004431800.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171277|gb|AEE20532.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 236

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318
            H  + ++I GHTD       ++DN+   L  +      L  + G+   +I+  S     
Sbjct: 158 KHPEKKVTILGHTDNV---GSSKDNFDQGLKMSRQVKWYLTARRGIPRHKITATS-RGEE 213

Query: 319 RLKIASD--PMNSANRRIDILVE 339
                +        N RI+I+V+
Sbjct: 214 EPIANNKSLSGRQENNRIEIIVD 236


>gi|89067386|ref|ZP_01154899.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
 gi|89046955|gb|EAR53009.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
          Length = 485

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           + + Q  A+ I           + +       R  +  +         F + ++   P++
Sbjct: 337 RDQGQRFARAILDAGRETRLSELQRMTRLLAPRVRLSTTFR-------FGRGATELDPQS 389

Query: 249 IVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--G 303
              L ++   +           + G TD       A  N RL  +RA      L+ +  G
Sbjct: 390 RTNLFQLAADIRDGAHDGQTLLLLGFTDGI---GPASANRRLGAERADEVLATLLAALGG 446

Query: 304 VSEDRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              + +  +  GF         D       NRR+++ V+
Sbjct: 447 ALPEGVEVRTEGFGEALPMGCDDTEWGRQINRRVELWVD 485


>gi|295677467|ref|YP_003605991.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
 gi|295437310|gb|ADG16480.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
          Length = 340

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 23/188 (12%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
            ++      + P ++ +      + ++  L++  +       +  +V+            
Sbjct: 155 PVDSNGAPVVVPRNEAETQLQGMRAQMHVLSRASAVQACDYPSVPVVQPAAAAQPAVVKN 214

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIAR 282
            ++            S     +    + ++ E +     S E +++ GH D         
Sbjct: 215 YTLKGDTLFAFGKSGSRDMTGKGQAEISRLAEKILAENASLEAVTVIGHAD---LIGSDA 271

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------------SDPMNSA 330
              +L   RA +  ++L++ GV   +I+  S   +    +A            ++P    
Sbjct: 272 AAQKLGEQRAMTVRRMLIEQGVPTLKITAESA-GNSDPVVAECSGTMQRKIACNEP---- 326

Query: 331 NRRIDILV 338
           NRR+ + V
Sbjct: 327 NRRVVVRV 334


>gi|170739034|ref|YP_001767689.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
 gi|168193308|gb|ACA15255.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
          Length = 624

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285
             +T  F+  S    P+    L  I E +  + E        I GHTDA        DN 
Sbjct: 503 DIDTITFETGSWQVAPDQARRLAAIAEAIRRAVEHNPQEVFLIEGHTDAV---GSEVDNL 559

Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
            LS  RA     VL +   V  + ++   G+    LK+ +   N  NRR+
Sbjct: 560 SLSDRRAQEVAAVLTRDFRVPPENLTT-QGYGEQYLKVNTQEANRENRRV 608


>gi|90022258|ref|YP_528085.1| OmpA family protein [Saccharophagus degradans 2-40]
 gi|89951858|gb|ABD81873.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 482

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q++  +I       ++           T   +  + +       F   S+    +    +
Sbjct: 307 QEIVNQIGFISQNPLSLQSELYADAPQTYKVLTENAMRLSVNFRFKDGSAELDNKAKQDI 366

Query: 253 QKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
            +I   +         I + G  D+      +     LS  RA +    L   G+S +  
Sbjct: 367 LRIVRYMQMPENADKRIQLVGFGDSKETAARST---VLSKLRAVAVKSALYSYGISSE-- 421

Query: 310 SKISGFAHHRLKIASD-PMNSANRRIDILVEDRQ 342
             + G        ++       N+R+++ V D Q
Sbjct: 422 -SVLGLGSDLPVASNAGSARLKNQRVEVWVFDSQ 454


>gi|28900586|ref|NP_800241.1| hypothetical protein VPA0731 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153840625|ref|ZP_01993292.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|260365466|ref|ZP_05778003.1| outer membrane protein [Vibrio parahaemolyticus K5030]
 gi|260877531|ref|ZP_05889886.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|260897528|ref|ZP_05906024.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|260901730|ref|ZP_05910125.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|28808966|dbj|BAC62074.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149745713|gb|EDM56843.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|308087083|gb|EFO36778.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308090536|gb|EFO40231.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308108906|gb|EFO46446.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308114281|gb|EFO51821.1| outer membrane protein [Vibrio parahaemolyticus K5030]
          Length = 187

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L +  + I + GHTD          N  LSL RA +A + L K     +RI +   F   
Sbjct: 109 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 164

Query: 319 RLK--IASDPMNSANRRIDILVE 339
                +  + ++  NRR+ + +E
Sbjct: 165 APICKVNENKLSGCNRRVVLTIE 187


>gi|163794640|ref|ZP_02188610.1| OmpA/MotB [alpha proteobacterium BAL199]
 gi|159179913|gb|EDP64438.1| OmpA/MotB [alpha proteobacterium BAL199]
          Length = 215

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF----RNIARDNWRLS 288
           +T  F  SS+         L K+ +    S   + + GH  A       R     N+ +S
Sbjct: 103 STVYFGHSSARLTGTERAELAKVAQTAIASGAAVRVIGHASARTADLDLRAHEVANFTMS 162

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRL----KIASDPMNSANRRIDILV 338
           L RA +   VL+ +G+  +RI +I      +      +      + NRR+++ +
Sbjct: 163 LKRANAVADVLIHAGLPANRI-RIDALGDSQPEFYEVMP--SGEAGNRRVEVFL 213


>gi|302035839|ref|YP_003796161.1| hypothetical protein NIDE0460 [Candidatus Nitrospira defluvii]
 gi|300603903|emb|CBK40235.1| exported protein of unknown function, OmpA family [Candidatus
           Nitrospira defluvii]
          Length = 236

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 7/96 (7%)

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+   + +V L    + L  + + +  I GH D          N  L   RA +A   L
Sbjct: 138 YSVSDNDGVVSLTTNADWLKENPKALLKISGHCDER---GTHDYNLVLGEKRAKAAKSFL 194

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333
           +  GV+  ++  I  +   R   A         NRR
Sbjct: 195 VDLGVNAKQV-AIVSYGKDRPFCADHDEACHQQNRR 229


>gi|88607299|ref|YP_504946.1| OmpA family protein [Anaplasma phagocytophilum HZ]
 gi|88598362|gb|ABD43832.1| OmpA family protein [Anaplasma phagocytophilum HZ]
          Length = 205

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 12/123 (9%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDN 284
           ++   +     FD            V+ ++ E L     +  +  GH DA+        +
Sbjct: 41  VAFAKKVEKVYFDIGKYDLKGPGKKVILELVEQLRQDDSMYLVVIGHADAT---GTEEYS 97

Query: 285 WRLSLDRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASDPMN-----SANRRIDI 336
             L   RA +  Q ++     ++    ++  G A    L  ++D        + NRR  I
Sbjct: 98  LALGEKRANAVKQFIIGCDKSLAPRVTTQSRGKAEPEVLVYSTDAQEVEKANAQNRRAVI 157

Query: 337 LVE 339
           +VE
Sbjct: 158 VVE 160


>gi|209965626|ref|YP_002298541.1| OmpA family protein [Rhodospirillum centenum SW]
 gi|209959092|gb|ACI99728.1| OmpA family protein [Rhodospirillum centenum SW]
          Length = 314

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 76/237 (32%), Gaps = 41/237 (17%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            +  +   S   + + ++  L +   K++               + ++ ++      +  
Sbjct: 44  AEEKVVDLSRYEEVVNEARRLTEEAAKQKQENEELRRLLTQAVAQLERDIESRRSMRNQM 103

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262
           L  L A    +GV         ++ +       +F+   ++   E    ++ + ++L   
Sbjct: 104 LQSLEASLDRQGVRVTLDPESGILRL---SGDLLFETGKAVYREEADRTVKVMADILGSV 160

Query: 263 TEVIS-------------------IRGHTDASPFRN-----IARDNWRLSLDRAYSAYQV 298
               +                   + GHTD  PFRN         N RLS +RA + +Q 
Sbjct: 161 LPCFAEGASVACPGERMPILEAVLVEGHTDRQPFRNVPPAQSQALNDRLSTERALAVFQS 220

Query: 299 LMK--------SGVSEDRISKISGFAHHRLK--IASDPMN--SANRRID--ILVEDR 341
           L +           S   +  +SG+   R               NRRID   ++  R
Sbjct: 221 LRETSPVLETLRNPSGQPLLGVSGYGERRPLPEAQGTTEEDYRRNRRIDLRFVLSSR 277


>gi|332665245|ref|YP_004448033.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334059|gb|AEE51160.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 798

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F  + +         + ++   L  + +  + I  HT+ +   N A     L+  R
Sbjct: 690 ENIIFLSNQAELDSSAYSEIHRLASFLNANPQLGVEIVAHTNNNCTYNFAA---DLTARR 746

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           A    ++L+ + ++ +RI +  G    +  +++  +     N+R++I 
Sbjct: 747 AEKIAELLIDAQIAAERI-RHRGSGKEQPLVSNATLTGRLANQRVEIT 793


>gi|300790394|ref|YP_003770685.1| OmpA family protein [Amycolatopsis mediterranei U32]
 gi|299799908|gb|ADJ50283.1| OmpA family protein [Amycolatopsis mediterranei U32]
          Length = 242

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 9/115 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARD 283
           I  +       F+  ++   P+     + +   LA +       + GH    P       
Sbjct: 134 IDRLLTEAPIAFEPDTAKLTPDGEQAARSVAIALAKAPAGFRYRVTGHVARGP--GGESA 191

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
             +LS DRA +  ++L  +G++  R+    G    R           +RR++I V
Sbjct: 192 ALKLSRDRARAVARILTTNGLTVARV-TYRGLGDTRP----ATGGEEDRRVEITV 241


>gi|323140666|ref|ZP_08075588.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414851|gb|EFY05648.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 244

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 35/168 (20%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK------ 254
           + L+ +  +   +G++ E  +T  ++ + D+    +  ++      E +  + +      
Sbjct: 57  ALLNEIHKELNNRGIMVEINKTHDVLRLHDKALKFLPGRAKPEAGEENVQQISEVLYTVL 116

Query: 255 -----IGEVLAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYSAYQVLMK------ 301
                         E I I GHTD+    FR+   DNW LS  RA   ++++        
Sbjct: 117 NKDRGDKPKYKELVETIFIEGHTDSDLPSFRSDYPDNWMLSTARAVRTWEMMSAFRPDGA 176

Query: 302 ----------SGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDI 336
                     +G     I   SG+A  R  + ++      S NRRIDI
Sbjct: 177 TQTLGEIKNHNGFP---IFSCSGYADTRRIVENETSKEEKSINRRIDI 221


>gi|224371662|ref|YP_002605826.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum
            HRM2]
 gi|223694379|gb|ACN17662.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum
            HRM2]
          Length = 1306

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 230  DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            D+     FD + S    +  + L  +   +  +   I I      +       +N  LS 
Sbjct: 1036 DKILLSNFDINQSDLTEDHKMALD-LLAKIMDNDLDIRILAFEGRASSTGDDENNITLSH 1094

Query: 290  DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
            +RA +    L   GVS++R+  ++G+        S+  N  NR
Sbjct: 1095 NRAKTVKDYLSVKGVSDERLGLVNGYGSA--LSLSNTPNQENR 1135


>gi|218510314|ref|ZP_03508192.1| peptidoglycan-associated lipoprotein [Rhizobium etli Brasil 5]
 gi|327193465|gb|EGE60361.1| peptidoglycan-associated lipoprotein [Rhizobium etli CNPAF512]
          Length = 177

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 43/143 (30%), Gaps = 7/143 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA       +      +  G     T        ++  +   FD  SS    +    L 
Sbjct: 29  ALASCAKKPPNSAGELGLGGGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + LA       ++ GH D          N  L   RA +A   L   GV   R+  I
Sbjct: 89  RQAQWLARYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 145

Query: 313 SGFAHHRLKI--ASDPMNSANRR 333
           S +   R           S NRR
Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167


>gi|332716442|ref|YP_004443908.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
 gi|325063127|gb|ADY66817.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
          Length = 177

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  S+    +    LQ+  + LA   +  I++ GH D          N  L   R
Sbjct: 68  DRIFFDTDSTSIRADAQQTLQRQAQWLARYPKYAITVEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +    L   GV   R+  IS +   +           S NRR
Sbjct: 125 AAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNRR 167


>gi|254439271|ref|ZP_05052765.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
 gi|198254717|gb|EDY79031.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
          Length = 514

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 11/154 (7%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L+ +     + +V       +        +L   +   +T  F+  S+    ++   + +
Sbjct: 362 LSDQGDRLANAIVNAGSEVPLTELQRMMRLLSPRVRMSSTFRFEPGSTRLDGQSRSNVMQ 421

Query: 255 IGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--GVSEDRI 309
           + + +         + + G +D      +A  N  LS  RA +    L ++  G   + +
Sbjct: 422 LAQAIRDGRFGGRELMLVGFSDGR---GLALANRDLSSARAEAVRLDLTRALGGTFPENV 478

Query: 310 -SKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
               + F         D +     NRR+++ V D
Sbjct: 479 EIDTAAFGEALPMACDDTIWGQQTNRRVELWVRD 512


>gi|163758789|ref|ZP_02165876.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
           phototrophica DFL-43]
 gi|162284079|gb|EDQ34363.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
           phototrophica DFL-43]
          Length = 167

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS+  P+    L +  + L        ++ GH D          N  L   R
Sbjct: 58  DRIFFDTDSSVIRPDAASTLDRQAQWLNQYPTYRITMEGHADER---GTREYNLALGARR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343
           A +A Q L   GV+ +RI  IS F   R           S NRR  + V    G
Sbjct: 115 AAAAKQYLTSRGVAANRIQTIS-FGKERPVAVCDDISCWSQNRR-SVTVLGGAG 166


>gi|23499825|ref|NP_699265.1| putative lipoprotein [Brucella suis 1330]
 gi|161620148|ref|YP_001594034.1| TraQ protein [Brucella canis ATCC 23365]
 gi|254702492|ref|ZP_05164320.1| TraQ protein [Brucella suis bv. 3 str. 686]
 gi|260568602|ref|ZP_05839071.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
 gi|261753065|ref|ZP_05996774.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|81789251|sp|Q9RPX3|YU58_BRUSU RecName: Full=Type IV secretion system putative outer membrane
           lipoprotein BRA0058; Flags: Precursor
 gi|5929877|gb|AAD56622.1|AF141604_12 ORF12 [Brucella suis 1330]
 gi|23463394|gb|AAN33270.1| lipoprotein, putative [Brucella suis 1330]
 gi|161336959|gb|ABX63263.1| TraQ protein [Brucella canis ATCC 23365]
 gi|260155267|gb|EEW90348.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
 gi|261742818|gb|EEY30744.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 172

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q  +  F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 61  RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GVS  RI+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARVRALAIYNWLINQGVSASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|163786938|ref|ZP_02181386.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
           ALC-1]
 gi|159878798|gb|EDP72854.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
           ALC-1]
          Length = 278

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----WRL 287
           +  +F    S    E+  VL KI  +LA  T    +I GH   +     A D       L
Sbjct: 163 DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDAIDRKTKKRNL 222

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           S+ RA   Y  L+K GV   R+  + G             +   RR++ILV  
Sbjct: 223 SVARAKYIYDYLVKKGVRPYRMKFV-GMRRKEPLGGEPEFD---RRVEILVTK 271



 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 14/126 (11%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280
             +  S  + ++   FD             L      +     E ISI G  D       
Sbjct: 12  FQLAFSQQELKHEVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDR---GS 68

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRR 333
              N  LS  RA +   V   +   E  I+ + G       + +         +   NR+
Sbjct: 69  DNYNLVLSQQRADAIKTVFSNNEFDESVITNVDGKGE---ILLNIVHEENLSKIRGLNRK 125

Query: 334 IDILVE 339
           ++I+V+
Sbjct: 126 VEIIVK 131


>gi|254720692|ref|ZP_05182503.1| hypothetical protein Bru83_14530 [Brucella sp. 83/13]
 gi|265985741|ref|ZP_06098476.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839356|ref|ZP_07472172.1| lipoprotein [Brucella sp. NF 2653]
 gi|264664333|gb|EEZ34594.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405604|gb|EFM61867.1| lipoprotein [Brucella sp. NF 2653]
          Length = 172

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q  +  F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 61  RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   +I+     +  +A +       P    NRR+DI +  +
Sbjct: 117 VARTRALAIYNWLINQGVPASKITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172


>gi|241206183|ref|YP_002977279.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860073|gb|ACS57740.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 177

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA       +      +  G     T        ++  +   FD  SS    +    L 
Sbjct: 29  ALASCAKKPPNSAGDLGLGSGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + L        ++ GH D          N  L   RA +A   L   GV   R+  I
Sbjct: 89  RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRLKTI 145

Query: 313 SGFAHHRLKI--ASDPMNSANRR 333
           S +   R           S NRR
Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167


>gi|160901602|ref|YP_001567183.1| OmpA/MotB domain-containing protein [Petrotoga mobilis SJ95]
 gi|160359246|gb|ABX30860.1| OmpA/MotB domain protein [Petrotoga mobilis SJ95]
          Length = 290

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 29/162 (17%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV- 258
              L  +  +     +  E T  G +IS+ D      F   S+    E   +L +IG + 
Sbjct: 82  QELLKIIEDEKYKGKITIEETDKGTIISMRD---IAFFRPGSAELTAEAKDLLYRIGTII 138

Query: 259 LAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           L H++  I + G TD  P    ++   NW LS  RA S         +   R+  +   A
Sbjct: 139 LEHTSNAIEVYGFTDDQPVLPSSVYPSNWHLSAARAASVVNFFTIE-LKNRRL--VEKMA 195

Query: 317 H----------------HRLKIASDPMNSANRRIDILVEDRQ 342
                                   D   +     +I +   +
Sbjct: 196 EINSGQFDIDYFYNSDRFFPIGEGDSEIAK----EISLLRSE 233



 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 28/108 (25%), Gaps = 6/108 (5%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           +K            W   ++D  T+L+  F+ ++ +        +               
Sbjct: 3   RKKR---EKTGDAKWMQTFSDMTTLLLTMFIALFSMATISPGKFQQAVVSLQNVF---EG 56

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126
              G+               +  I + + K   D K       ++  +
Sbjct: 57  QPIGVLVGGRSISDEPLITSNPGIRQELLKIIEDEKYKGKITIEETDK 104


>gi|308049988|ref|YP_003913554.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307632178|gb|ADN76480.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 285

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
           +TD          N  ++  +A +    L++SG+SE+RI   +     R    +      
Sbjct: 218 YTDNHR---SKATNQAITEQQANTLRSYLVQSGISEERIIA-TAHGEQRHIANNRTTRGR 273

Query: 331 --NRRIDILVE 339
             NRR+ + VE
Sbjct: 274 DLNRRVVVRVE 284


>gi|209550775|ref|YP_002282692.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536531|gb|ACI56466.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 177

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + LA       ++ GH D          N  L   R
Sbjct: 68  DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 124

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   L   GV   R+  IS +   R           S NRR
Sbjct: 125 AAAAKDYLASRGVPAQRLKTIS-YGKERPVAVCDDISCWSQNRR 167


>gi|29347895|ref|NP_811398.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572488|ref|ZP_04849890.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298387855|ref|ZP_06997405.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|29339797|gb|AAO77592.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251837903|gb|EES65992.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298259460|gb|EFI02334.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 366

 Score = 59.2 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V +      + E  +    + +   +    F  +S+    +    +  + E L  + 
Sbjct: 236 EPVVVEQPKPAPVVEQPQPRKEVVVQPMKQDIFFALNSAKIQDDQKSKINMLVEYLQKNP 295

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321
              + + G+ DA+     ++ N  LS  RA +  +VL   G++ DRI   S      +  
Sbjct: 296 SAKVKVTGYADAN--TGNSKINKTLSEKRAANVAEVLKTKGITPDRIIADS-KGDTVQPY 352

Query: 322 IASDPMNSANRRIDILV 338
              +       R+ I +
Sbjct: 353 KTPEEN-----RVSICI 364


>gi|294341389|emb|CAZ89806.1| putative bacterial outer membrane protein OmpA/MotB [Thiomonas sp.
           3As]
          Length = 172

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 6/109 (5%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
            D      F  +S+    +   V++   + L       + ++G+ D          N  L
Sbjct: 65  PDVPKQVYFAFNSAALKAQYKPVVEVNAQFLQSHPAAHLQLQGNCDPR---GSQEYNLAL 121

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
              RA +  + +   G S +++  IS +   +    +    + +RR+D+
Sbjct: 122 GQSRANAVMKAMTLLGASPNQMEAIS-YGSEK-ASPARADYAHDRRVDL 168


>gi|227823307|ref|YP_002827279.1| putative outer membrane lipoprotein Omp16-like protein precursor
           [Sinorhizobium fredii NGR234]
 gi|227342308|gb|ACP26526.1| putative outer membrane lipoprotein Omp16-like protein precursor
           [Sinorhizobium fredii NGR234]
          Length = 176

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + LA      I+I GH D          N  L   R
Sbjct: 67  DRIFFDTDSSSIRADAQATLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARR 123

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +  + L   GV  +R+  IS +   +           S NRR
Sbjct: 124 AAATREYLAGQGVPANRMRTIS-YGKEKPVAVCDDISCWSQNRR 166


>gi|227824065|ref|YP_002828038.1| putative outer membrane protein, OmpA/MotB domain protein
           [Sinorhizobium fredii NGR234]
 gi|227343067|gb|ACP27285.1| putative outer membrane protein, OmpA/MotB domain protein
           [Sinorhizobium fredii NGR234]
          Length = 189

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 9/102 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + S+         L K    L  +    + ++G  D S   +       LS  RA +A
Sbjct: 82  FTQDSATLDAVAKATLDKQATWLNSNQRWLVKLQGFADDSGSASKMAT---LSQQRADAA 138

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
              L+  GV  +R+    G+ + R         S    NRR+
Sbjct: 139 MAYLVSKGVDPNRLWA-KGYGNDREVRDC-TDRSCKVQNRRV 178


>gi|61655687|gb|AAX49330.1| PlpD [Bibersteinia trehalosi]
          Length = 219

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290
               +FD        +   V+  +   L  S  + + I GHTD          N  LS  
Sbjct: 116 EGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSGAQQVKIEGHTDRL---GSVAYNLDLSQR 172

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           RA      L + GV+ + ++ + G     
Sbjct: 173 RANMVKARLQQQGVTAE-MTAV-GLGKAH 199


>gi|329960555|ref|ZP_08298922.1| OmpA family protein [Bacteroides fluxus YIT 12057]
 gi|328532619|gb|EGF59409.1| OmpA family protein [Bacteroides fluxus YIT 12057]
          Length = 409

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 11/134 (8%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
            + K K  +Q + K +   +   V       +            + D  N   F+   + 
Sbjct: 250 KSKKAKPEIQYVEKIVEKVVEKPVI------MEKVVQAPAHANVLCDLFNNIYFEFDKAE 303

Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              ++  V+ +I   +LA +T+   I G TDA   +   + N  LS  RA +    L++ 
Sbjct: 304 ITEKSDAVIDQIARIMLADTTKRYLITGCTDA---KGSPQYNMGLSRRRADAVVNALLQK 360

Query: 303 GVSEDRISKISGFA 316
           GV E+ + K  G  
Sbjct: 361 GVPEE-MLKSRGVG 373


>gi|289165851|ref|YP_003455989.1| lipoprotein [Legionella longbeachae NSW150]
 gi|288859024|emb|CBJ12952.1| putative lipoprotein [Legionella longbeachae NSW150]
          Length = 239

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S          L  I  +L       + + G TD             LS  +A + 
Sbjct: 114 FMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDV---GTRYHKRSLSQAQAETM 170

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
              L  + +   ++ K  G+        +     ++ NRRI+I
Sbjct: 171 LTFLWANNIPA-QLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 212


>gi|270159328|ref|ZP_06187984.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
 gi|269987667|gb|EEZ93922.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
          Length = 249

 Score = 59.2 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 7/103 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S          L  I  +L       + + G TD             LS  +A + 
Sbjct: 124 FMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDV---GTRYHKRSLSQAQAETM 180

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
              L  + +   ++ K  G+        +     ++ NRRI+I
Sbjct: 181 LTFLWANNIPA-QLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 222


>gi|86134308|ref|ZP_01052890.1| OmpA family protein [Polaribacter sp. MED152]
 gi|85821171|gb|EAQ42318.1| OmpA family protein [Polaribacter sp. MED152]
          Length = 397

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 78/270 (28%), Gaps = 17/270 (6%)

Query: 66  EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK----NSVDLKIGSTNQK 121
               N            +        +   N       +  +        +   G     
Sbjct: 129 AASLNITEPTDNGGDPMMALNFGITPQFRINNRMSLFLDFSSLIHFYQDDNFDGGPNLSP 188

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           ++      N     +    ++ + + +   E+     +  +++  +   E       +KE
Sbjct: 189 RESNISLFNTSLGLSFALGKNKQLADSYFMEEVVVNDELEEIKNRLAAAEKEIEVLKNKE 248

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                 ++  + +L ++           N    V+  +    I   +        FD + 
Sbjct: 249 LAATPNQELIMTELDERYVRKDEADKYAN----VVTGSNVDFIRQLLNSGYINVYFDVNK 304

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     ++  +  + + L  +      + G+ D +        N  LS +RA   + VL+
Sbjct: 305 TRIQDGSLNSVNYLKQFLIDNPTVNAELIGYADET---GSEERNKTLSQNRAKRVFDVLV 361

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA 330
            +G+S  R+S   G    +        ++ 
Sbjct: 362 AAGISPARLSYYGG-GEDKSV----TEDAR 386


>gi|94502195|ref|ZP_01308691.1| OmpA family protein [Oceanobacter sp. RED65]
 gi|94425675|gb|EAT10687.1| OmpA family protein [Oceanobacter sp. RED65]
          Length = 143

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 17/109 (15%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS    +  + L      L       +S+ G TD          N  L+ DRA + 
Sbjct: 43  FDFDSSELTGKARMKLLAKMADLQKQGVSSVSVFGFTDNV---GAEAYNKNLAKDRASTV 99

Query: 296 YQVLMKSGVSEDRISKISGFAHHRL----KIASDPMNSA--NRRIDILV 338
            + L   GV   +I+++ G    +      + ++   +   NRR +I +
Sbjct: 100 ARFLANGGV---QINEVVG----KPLCCYLVDNESDQNRHVNRRAEIHL 141


>gi|170702223|ref|ZP_02893126.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
 gi|170132858|gb|EDT01283.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
          Length = 233

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 25/223 (11%)

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
            +   S++        ++           +   L +S N            + +  + R 
Sbjct: 14  MLAACSSASGPTFNAYAIDLADGSRAYRVECHGLFESSNACMRAAQRVCGDQPVRPLDRL 73

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLP 246
           +RL D A+KI    +      +   ++  T        I+   +  +F    +      P
Sbjct: 74  QRLSDPAQKIDDPGAMTFQCGVPPQLVVATPAPVAEKPIVLAAD-ALFAFDKADVDAIKP 132

Query: 247 ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
           E    L +I   L+ +     + + G+TD          N  LS  RA +    L   GV
Sbjct: 133 EGRAELDEIASKLSAAPSVRHVDVVGYTDRL---GSDEYNAALSQRRAETVKWYLTSQGV 189

Query: 305 SEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDI 336
           +     +I      +  +        N           RR++I
Sbjct: 190 TA----QIDARGDGK-VLPGTACEMRNRAELIRCLAPDRRVEI 227


>gi|153809080|ref|ZP_01961748.1| hypothetical protein BACCAC_03388 [Bacteroides caccae ATCC 43185]
 gi|149128413|gb|EDM19632.1| hypothetical protein BACCAC_03388 [Bacteroides caccae ATCC 43185]
          Length = 395

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 5/144 (3%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234
              + + I  ++  +    +    ++ +         +  +       ++I+       T
Sbjct: 235 QRPTPQIISEIELNQMRDQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDPNIAPRT 294

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S    P+  + L  +   +         I G+ D+         N +LSL RA 
Sbjct: 295 VFFKIGSDRLSPQEEMNLSYLANRIKEFPGTTYTINGYADS--ATGTPAFNEKLSLKRAQ 352

Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316
               +L+K  G+  D +   +G  
Sbjct: 353 VVKDLLVKKYGIPADNLKVAAGGG 376


>gi|15919973|ref|NP_361033.1| TraQ protein [Plasmid pSB102]
 gi|15722272|emb|CAC79164.1| TraQ protein [Plasmid pSB102]
          Length = 184

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 14/159 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
            R   +  L  +++     L   +    VL    +  +      Q  +  F  +SS   P
Sbjct: 36  ARTAEVLSLRAELADAQDKLRNQSTQPVVLAAPVKPAL---PASQTVSVYFPFNSSAFRP 92

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            T   +  +  +L  +   I +RG TD            R++L+RA +A   L+  GVS 
Sbjct: 93  -TQTQVATLLPLLGGNVRQIWVRGRTDGDRPSAADE---RVALNRALAAKNWLVAQGVSP 148

Query: 307 DRIS--KISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
            +IS   +S    +     +      + NRR+DI V +R
Sbjct: 149 LKISVNYVSA-GDY--VADNVSAAGRAQNRRVDIEVFNR 184


>gi|260774296|ref|ZP_05883211.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
 gi|260611257|gb|EEX36461.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
          Length = 320

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 11/106 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    S     +   L ++ +V+  +   V  + G TD++        N ++S  RA +A
Sbjct: 223 FALGKSTLEDLSYFYLNEVVDVMRTNPALVAHLVGRTDST---GSDAINNKISAQRAQAA 279

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339
            Q L   G+   RI+ +S  A  R     ++D   S    + I+++
Sbjct: 280 SQYLQSQGIDAKRIN-VSAVADSRPLTQGSADIERS----VQIILK 320


>gi|116253708|ref|YP_769546.1| OmpA family peptidoglycan-associated lipoprotein precursor
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258356|emb|CAK09458.1| putative OmpA family peptidoglycan-associated lipoprotein precursor
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 177

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA      +     D  +       T        ++  +   FD  SS    +    L 
Sbjct: 29  ALASCAKKNVPNSAGDLGLGAGAGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + L        ++ GH D          N  L   RA +A   L   GV   R+  I
Sbjct: 89  RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRLKTI 145

Query: 313 SGFAHHRLKI--ASDPMNSANRR 333
           S +   R           S NRR
Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167


>gi|312114023|ref|YP_004011619.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219152|gb|ADP70520.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 302

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 30/117 (25%), Gaps = 12/117 (10%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284
           I +        F+       P       ++   +      + I  GHTD          N
Sbjct: 185 IPVRKVPLPIQFETDRDELTPVGRQYADELAAAINEQRPAVIILEGHTDER---GTDAHN 241

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334
             LS  R       L +      RI            +        ++ +   NRR+
Sbjct: 242 MDLSKRRVERVAAYLKREKGVAARIET-RARGKTEPYVPQNASNLTNEQLWELNRRV 297


>gi|167754048|ref|ZP_02426175.1| hypothetical protein ALIPUT_02336 [Alistipes putredinis DSM 17216]
 gi|167658673|gb|EDS02803.1| hypothetical protein ALIPUT_02336 [Alistipes putredinis DSM 17216]
          Length = 431

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289
           +    F+   +   P+  + L  I   + +    ++  I GH D  P       N RL+ 
Sbjct: 330 KGITFFNIGQTELSPKEKLRLDIIATQIKNAPKNKIYVIEGHAD--PQTGSKAVNTRLAE 387

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHR-LKIASDPMNSANRRIDIL 337
            RA   Y  L+  GV  + + +  G++  +            N R+ ++
Sbjct: 388 QRAKKVYDYLISKGVKAENL-QYKGYSDTKSPFKT----EQEN-RVTVI 430


>gi|83717436|ref|YP_439684.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
           thailandensis E264]
 gi|83651261|gb|ABC35325.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           thailandensis E264]
          Length = 298

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 36/120 (30%), Gaps = 19/120 (15%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285
               +F    S      P     L +I   L    + I    + G+TD          N 
Sbjct: 176 DYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTNTYNR 232

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336
           +LSL RA +  + L   G+  + I    G                  +      +RR+ I
Sbjct: 233 QLSLARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGHSAEAIACLAPDRRVRI 291


>gi|24373749|ref|NP_717792.1| OmpA family protein [Shewanella oneidensis MR-1]
 gi|24348129|gb|AAN55236.1|AE015661_6 OmpA family protein [Shewanella oneidensis MR-1]
          Length = 269

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 7/235 (2%)

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
              +     +   ++ E++   L            +             T + +S+   E
Sbjct: 31  QPLLIEPQTEWTIEQEEDDGEALIGLGGGALLGALVGGPVGAVVGGITGTLIGQSVADTE 90

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              +   + ++ +A++R++      K+++S        +  K +         L+S +  
Sbjct: 91  LVSVTLKNPQQHIAVQRQQVTSLTVKQLASEQRAAEYASTQKHLDALLAEQQQLLSELAL 150

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
                F   SS    + +  L  +  V+  S+E  + ++G+ +        RDN  LS  
Sbjct: 151 GMNVQFRTGSSELEADFLPQLDNVATVMKRSSESNLELKGYAERR---GDWRDNQSLSEH 207

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343
           R       L++ GV+  R++                   + ++RR+ + +   QG
Sbjct: 208 RLLEVRDYLIQQGVAPARMTT-QALGAAMSLNEQLDSESDVSDRRVTLTIPPTQG 261


>gi|311294129|gb|ADP88820.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294135|gb|ADP88823.1| outer membrane protein [Vibrio parahaemolyticus]
          Length = 182

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 16/148 (10%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +DL+      +  + A N  +   F+     +++          +D +           +
Sbjct: 49  EDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLH---------YDTNEHHLTNVHKQAI 99

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
            K  E L +  + I + GHTD          N  LSL RA +A + L K     +RI + 
Sbjct: 100 SKYLE-LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE- 154

Query: 313 SGFAHHRLK--IASDPMNSANRRIDILV 338
             F        +  + ++  NRR+ + +
Sbjct: 155 KAFGESAPICKVNENKLSGCNRRVVLTI 182


>gi|167839513|ref|ZP_02466197.1| ompA family protein [Burkholderia thailandensis MSMB43]
          Length = 276

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 19/116 (16%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 158 LFPFDKSALRDLLPAGRAELDRIAAALQQQYQHIRSVRVTGYTDRL---GTDTYNRQLSL 214

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336
            RA +    L   G+  D I    G        +  P           + +RR+ I
Sbjct: 215 ARAETIRAYLTTRGLPGDLIVA-QGLGMADPVSSGCPAGRSAEAIACLAPDRRVRI 269


>gi|83941931|ref|ZP_00954393.1| OmpA domain protein [Sulfitobacter sp. EE-36]
 gi|83847751|gb|EAP85626.1| OmpA domain protein [Sulfitobacter sp. EE-36]
          Length = 520

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 52/166 (31%), Gaps = 14/166 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +  + +       I+     +  + + +          +  S         F+ 
Sbjct: 363 DQTPEEIPVEDQGNRFTNAIAVAGPEITLEELQRMNAALKPMARLSTSFR-------FEA 415

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++   +Q++   L               S  +  +  N  ++L RA +  Q +
Sbjct: 416 GSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAV 475

Query: 300 MKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339
           + + V+ + + +++     F         D       NRR+++ V 
Sbjct: 476 ITAAVTAN-LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520


>gi|260911457|ref|ZP_05918046.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634386|gb|EEX52487.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 383

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           ++ RL +  ++I+     L   N     + +  ++  + ++   + T +F +  S+  P 
Sbjct: 236 KESRLAEKDRQIADLQKALDDCNNQPKTIVKNVKSETVTNL---QPTVLFRQGKSVIDPA 292

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVS 305
               L+ I   + +  +  + IRG+         A  N +LS  RA +    L+ K  ++
Sbjct: 293 QYAPLELIASYMRNHPDAKVEIRGYASPE---GSAELNQKLSNARAQAVKDALVRKYKIA 349

Query: 306 EDRISKISGFA 316
             R++   G  
Sbjct: 350 ASRLTT-KGMG 359


>gi|213024604|ref|ZP_03339051.1| hypothetical protein Salmonelentericaenterica_19791 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 154

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 4/99 (4%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           L  +     +  +       +     R   MF             V+ K    +A     
Sbjct: 59  LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 115

Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303
           +++ GHTD+ P  +     N  LS  RA     +L   G
Sbjct: 116 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGG 154


>gi|217978517|ref|YP_002362664.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
 gi|217503893|gb|ACK51302.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
          Length = 325

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 13/107 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S+    E      ++   +     +++ + GHTD    R     N +LS+ RA + 
Sbjct: 220 FEYRSASLTDEGRQAADELARAIREQQPQIVRLVGHTD---LRGGPEYNMKLSVARAEAV 276

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK----IASDPMN---SANRRID 335
              L ++ ++     +  G            +    +   + NRR++
Sbjct: 277 AAYLKENNIAVT--VEPEGVGAAEPLQLSDASGLTQDDVYALNRRVE 321


>gi|167578122|ref|ZP_02370996.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
           thailandensis TXDOH]
          Length = 267

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 19/116 (16%)

Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289
           +F    S      P     L +I   L    + I    + G+TD          N +LSL
Sbjct: 149 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDTYNRQLSL 205

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336
            RA +  + L   G+  + I    G                  +      +RR+ I
Sbjct: 206 ARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGYSAEAIACLAPDRRVRI 260


>gi|218662996|ref|ZP_03518926.1| OmpA family peptidoglycan-associated lipoprotein precursor
           [Rhizobium etli IE4771]
          Length = 169

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA       +      +  G     T        ++  +   FD  SS    +    L 
Sbjct: 21  ALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 80

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + L        ++ GH D          N  L   RA +A   L   GV   R+  I
Sbjct: 81  RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 137

Query: 313 SGFAHHRLKI--ASDPMNSANRR 333
           S +   R           S NRR
Sbjct: 138 S-YGKERPVAVCDDISCWSQNRR 159


>gi|90022215|ref|YP_528042.1| OmpA family protein [Saccharophagus degradans 2-40]
 gi|89951815|gb|ABD81830.1| OmpA/MotB [Saccharophagus degradans 2-40]
          Length = 230

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 64/227 (28%), Gaps = 14/227 (6%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           +K         +  L          +     +    + +     +     +   +     
Sbjct: 1   MKTKQLISAATFSALLIVSNSAFAGETKTQKQRDNDKAAATLSTMVIGGLVGGPVGAFIG 60

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                L+ E      +++ L     ++    + L  D      + +     +   +    
Sbjct: 61  AVTGSLAAEHADTKHQQQELTIAMNEVEEMKAQLEKDQQRASAMEQKAAEKLEFQV---- 116

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
              +F   S       +  +  +   L  + E  +++ GH D          N+ LS +R
Sbjct: 117 ---LFTTGSDELSQTDLKRVNSVARYLNTNPELKVNLEGHADPR---GTDEYNYVLSEER 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336
             S  + L + G+   R+   S +               + +RR+ I
Sbjct: 171 VKSVIKALEEKGIDRSRV-TYSAYGSDLSTAYQGDLEAYALDRRVKI 216


>gi|170691012|ref|ZP_02882178.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
 gi|170144261|gb|EDT12423.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
          Length = 353

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            I G+TD          N  LSL RA +    L   GV+      I G    +       
Sbjct: 274 RITGYTDRL---GDNAHNQSLSLQRAQTVAAYLRARGVTVP--IAIRGLGSAKPVAQCRQ 328

Query: 327 MN--------SANRRIDI 336
                     + NRR++I
Sbjct: 329 TRRDELVRCLAPNRRVEI 346


>gi|116249010|ref|YP_764851.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115253660|emb|CAK12053.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 184

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L      L+ +   +  ++G  D       A     
Sbjct: 68  ILNVGRRIYFAQDSATLDSVAMATLDNQAAWLSKNPTWLLKLQGFADD---SGSASSMET 124

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 125 LSQKRADAAMAYLASKGVEARRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173


>gi|85374663|ref|YP_458725.1| putative outer membrane lipoprotein [Erythrobacter litoralis
           HTCC2594]
 gi|84787746|gb|ABC63928.1| putative outer membrane lipoprotein [Erythrobacter litoralis
           HTCC2594]
          Length = 242

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 9/212 (4%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            +             +E          +  +  +        L+  + L   R+  L   
Sbjct: 22  AAASQTAAPYVERLAAEAEAIAGNDVTVRFADREGYPSRHAMLTPARELDEGRRADLAKQ 81

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGIL----ISIIDQRNTPMFDKSSSIPLPETIVV 251
              I         D  +     E     +     +  I    T  F++SS+        +
Sbjct: 82  IGAIDGIGGVHWTDGTMLAEAGEAPLESLRCQDDVQAILTARTLRFEESSAALAAGGTEL 141

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           L ++   L      +I+I GHTD          N  LS  RA +  + L+  GV E+ + 
Sbjct: 142 LDEVAAALRPCYGAIIAITGHTDT---SGDEPANIVLSRRRAAAVERALVARGVPEESL- 197

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +I+G    +     DP + ANRRI+  V  +Q
Sbjct: 198 RINGLGSSQPVQGLDPADPANRRIEFSVVAKQ 229


>gi|298386438|ref|ZP_06995994.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|298260815|gb|EFI03683.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 364

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 7/120 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V +      + E  +    + I   +    F  +S+    +    +  + E L   +
Sbjct: 234 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHS 293

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF-AHH-RL 320
              +S+ G+ D          N  LS  RA +  ++L   GV+ DRI  + G+     + 
Sbjct: 294 AAKVSVTGYADKE--TGNPNINMTLSEKRAKNVIEMLKAKGVAADRI--VIGYKGDTVQP 349


>gi|306841163|ref|ZP_07473879.1| lipoprotein [Brucella sp. BO2]
 gi|306288789|gb|EFM60107.1| lipoprotein [Brucella sp. BO2]
          Length = 129

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
               Q  +  F +  ++  P +   + ++  +L    + I++RG TD +          +
Sbjct: 18  RPPKQTISVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPTPGDT---Q 73

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           ++  RA + Y  L+  GV   +I+     +  +A +       P    NRR+DI +  +
Sbjct: 74  VARVRALAIYNWLINQGVPASKITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 129


>gi|332829521|gb|EGK02170.1| hypothetical protein HMPREF9455_01804 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 382

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 8/202 (3%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
                 +     D      L  S  L K   K  +   P   +     +  ++ L     
Sbjct: 183 DDFNGREQGSHYDGTVNALLGVSFKLSKGGFKIVDAADPAELQRLNNQINDQRALLGNKD 242

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
              S L   +A+     V+ + T+     + +      +F   S+       + +     
Sbjct: 243 SEISRLKTELANKPEPQVIVQETKEIKEQTEVLMNAVVVFRIGSAKLEQNQDINIFNAAR 302

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315
            L  +    + + G+ D S     A  N RLS  RA +  +VL+ K  ++  RI+  +  
Sbjct: 303 YLKDNPSVNVVVTGYADKS--TGTAAINQRLSEQRAEAVAKVLIDKYDIAPSRITTKAS- 359

Query: 316 AHHRLKIASDPMNSANRRIDIL 337
                   +D     NR +   
Sbjct: 360 GDKEQLFPTD---QWNRVVVFT 378


>gi|313141840|ref|ZP_07804033.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
 gi|313130871|gb|EFR48488.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
          Length = 263

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +   +    +     +K +  + +  +    +L   V ++  K          +   + D
Sbjct: 62  QQADITTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRL---LFD 118

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLS 288
           +  T + +    + L    ++LQK+ + +      + I G+ D    +     +D+  LS
Sbjct: 119 EEKTAIENADEILFLKRLALILQKMPQTM-----HLDIIGYADNVEGKPNLKYQDSLGLS 173

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
             RA +  ++L+++ V+  +I+ + G           +    + NRR++ 
Sbjct: 174 ALRASNVAKILIENQVNPQKITSLGG-GATNFLLPNTNAENRAQNRRVEF 222


>gi|300310619|ref|YP_003774711.1| OmpA protein [Herbaspirillum seropedicae SmR1]
 gi|300073404|gb|ADJ62803.1| OmpA protein [Herbaspirillum seropedicae SmR1]
          Length = 190

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F+  +    P +   L+K    +         + GH D         +N  LSL RA  
Sbjct: 88  LFELGTDRLTPASQDALKKAIAEIKDFPAGEFVLTGHADNI---GSETNNDALSLRRARL 144

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339
             + L ++ V    I ++ G      ++          NR ++I + 
Sbjct: 145 IERELRRADVKALSI-EVIGKGARDPRVPQKRGVAEPRNRFVEIKIR 190


>gi|83855407|ref|ZP_00948937.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83843250|gb|EAP82417.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 520

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 52/166 (31%), Gaps = 14/166 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +  + +       I+     +  + + +          +  S         F+ 
Sbjct: 363 DQTPEEIPVEDQGNRFTNAIAVAGPEITLEELQRMNAALKPMARLSTSFR-------FEA 415

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++   +Q++   L               S  +  +  N  ++L RA +  Q +
Sbjct: 416 GSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAV 475

Query: 300 MKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339
           + + V+ + + +++     F         D       NRR+++ V 
Sbjct: 476 ITAAVTAN-LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520


>gi|311294121|gb|ADP88816.1| outer membrane protein [Vibrio parahaemolyticus]
          Length = 182

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L +  + I + GHTD          N  LSL RA +A + L K     +RI +   F   
Sbjct: 105 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 160

Query: 319 RLK--IASDPMNSANRRIDILV 338
                +  + ++  NRR+ + +
Sbjct: 161 APICKVNENKLSGCNRRVVLTI 182


>gi|311294119|gb|ADP88815.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294123|gb|ADP88817.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294125|gb|ADP88818.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294127|gb|ADP88819.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294131|gb|ADP88821.1| outer membrane protein [Vibrio parahaemolyticus]
 gi|311294133|gb|ADP88822.1| outer membrane protein [Vibrio parahaemolyticus]
          Length = 182

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           L +  + I + GHTD          N  LSL RA +A + L K     +RI +   F   
Sbjct: 105 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 160

Query: 319 RLK--IASDPMNSANRRIDILV 338
                +  + ++  NRR+ + +
Sbjct: 161 APICKVNENKLSGCNRRVVLTI 182


>gi|313676967|ref|YP_004054963.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943665|gb|ADR22855.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 618

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F+  S     ++   + K+ ++L+ +    I I G+TD       A  N  LS  R
Sbjct: 519 NNIYFEFDSYELSEKSSNEINKVADLLSQNPNLKIEIGGYTDEI---GSASYNKELSRKR 575

Query: 292 AYSAYQVL-MKSGVSEDRISKISGFA 316
           A + Y+ L +K GV E+ I  + G+ 
Sbjct: 576 AKAVYEKLIIKDGVLEENIKAV-GYG 600


>gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 233

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 162 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 218

Query: 289 LDRAYSAYQVLMKSG 303
             RA S    L+  G
Sbjct: 219 EKRAQSVVDYLISKG 233


>gi|332707017|ref|ZP_08427077.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
 gi|332354282|gb|EGJ33762.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
          Length = 802

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 6/232 (2%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
              ++   + +K      K   Q     +             N    +  +  +L  + +
Sbjct: 563 APEVSDYGLTVKANRQRLKLAGQLPNQALRSNVEQIAKAAAPNLALDNQIEVIELPYTDE 622

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           L ++  +     L  +    I+A   + R+      + +     +          ++   
Sbjct: 623 LTQAQVQRVRNTLNQMDGVVIVASYTEGRVTVKGAILYAKDFPKIIQAFESIPGVKSVEN 682

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETI-VVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
            + +  +D  +   FD  S+   PE I   ++ I E +    +  + I G+ D       
Sbjct: 683 NLQLHGLDVTSRIYFDLGSAQLKPEDIGTKIRSIKEFMERYPQKHLRIIGYADPR---GQ 739

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
             +N  L+  RA     VL++ G+   R+ ++ G       + +      NR
Sbjct: 740 LTENQGLAQQRAQMVKDVLVQQGIDPKRL-QVRGVGKRPPDVDASQPLWLNR 790


>gi|218462392|ref|ZP_03502483.1| OmpA family peptidoglycan-associated lipoprotein precursor
           [Rhizobium etli Kim 5]
          Length = 177

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
            LA       +      +  G     T        ++  +   FD  SS    +    L 
Sbjct: 29  ALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           +  + L        ++ GH D          N  L   RA +A   L   GV   R+  I
Sbjct: 89  RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 145

Query: 313 SGFAHHRLKI--ASDPMNSANRR 333
           S +   R           S NRR
Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167


>gi|85709689|ref|ZP_01040754.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
           NAP1]
 gi|85688399|gb|EAQ28403.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
           NAP1]
          Length = 198

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSA 295
           F    +    + +  L++I      +     + G H+D+         N R +  R  + 
Sbjct: 76  FPDGGAELDDDALAALEQIANSEQIALGGPIVLGAHSDSD---GSDSANERAAEARGLAV 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILV 338
              L++ GV EDRI  I  F                ++   + NRR+++LV
Sbjct: 133 AGWLIERGVDEDRIDVIV-FGEQNPAEPNALPDGSPNEEGRALNRRVEVLV 182


>gi|332883362|gb|EGK03645.1| hypothetical protein HMPREF9456_01712 [Dysgonomonas mossii DSM
           22836]
          Length = 410

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 18/170 (10%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL---ISIIDQRNT 234
              +         ++ +L  +I S         + + +  +     ++     I +Q   
Sbjct: 245 DEADPAAIRSMNDKINELRGQIGS--KDSEISRLKQELAVKPEPQIVIEKTKEIKEQTEV 302

Query: 235 PM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
            M     F   S+       + +      L  + +  + + G+ D S     A  N RLS
Sbjct: 303 LMNAVVVFHIGSAKLEKNQDINIYNAARYLKDNPQVNVIVTGYADKS--TGTAAINQRLS 360

Query: 289 LDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
             RA +   VL+ + G+S  RI+  +          +D     NR +   
Sbjct: 361 EQRAEAVANVLVEEYGISRSRITTKAS-GDREQLFPTD---QWNRVVVFT 406


>gi|294787634|ref|ZP_06752878.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri
           ATCC 29453]
 gi|294483927|gb|EFG31610.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri
           ATCC 29453]
          Length = 478

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 84/300 (28%), Gaps = 27/300 (9%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER-----SSQNKIDLSIDEHI 106
           W +    ++  K +  Y     K      +    ++            + + +++   ++
Sbjct: 195 WGVALGGEERVKDVANYVMSLSKMQHNEERAARGQEIFKANCVVCHGDKGQGNMATAPNL 254

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           T N            +      +          ++   + LT               + +
Sbjct: 255 TDNIWLWGGTEKAIIETITGGRHGQMPAWKGFLTDDKIHLLTAYVWGKSHPDYKGYPQDT 314

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            +      +P   + K  A              +   S          V          +
Sbjct: 315 KDYV--GGIPTAEEPKKAAEPAASAPVVAVSAPAVAASEPTPVVAASEVQAAPAADKAEV 372

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            + +      F    S           ++ +  A + + + I G TD++     A  N +
Sbjct: 373 RVENGVVKFYFAVGKSAIAANAEKATGEVVKA-AKAGKKLVISGFTDST---GNAVANEK 428

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS------KISGFAHHRLKIASDPMNSANRRIDILVED 340
           LS +RA +    L+K GV +D +        +           ++      RR+++ ++D
Sbjct: 429 LSKNRAQAVQAYLIKQGVKKDSMVLRKPESSVGAKG-------NNAEG---RRVEVKIQD 478


>gi|218516473|ref|ZP_03513313.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           8C-3]
          Length = 170

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + LA       ++ GH D          N  L   R
Sbjct: 61  DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 117

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   L   GV   R+  IS +   R           S NRR
Sbjct: 118 AAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 160


>gi|332877635|ref|ZP_08445378.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684384|gb|EGJ57238.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 364

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 87/277 (31%), Gaps = 25/277 (9%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
               G          +S   I  +        + +  +  T       +       +  +
Sbjct: 92  PTVVGTTSSTITSRTASNTAIARTASNTTIARTANPAVVRTATNTAITQRSVVPAAVVQT 151

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q +      L + S   + L K   L  +        +   S     A   +        
Sbjct: 152 QTTAAIAQQLAQLSGTVEQLRKQQQLLLATLVANTGMVAAKSNTAPTAANAQATAVGTQA 211

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---------------FDKSSS 242
            +++T +          V+   T TG+ I I  ++ + +               F  + +
Sbjct: 212 TVATTTATTATSGYAPIVVQSVTATGVPIQISAEKRSELEQLLAAYGHKKALLYFANNKT 271

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
           IPL     ++ ++  +L    E  I + G+  A      A  N  LS++RA +  Q+L  
Sbjct: 272 IPLAYDPTIIDEMVTMLQAHPELSILLEGYASAV---GSAAYNNVLSMERAVAVAQILNA 328

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            G+S +RI         +          A RR+++ V
Sbjct: 329 KGISNERILTA-----FKGIDPQATPAQA-RRVELRV 359


>gi|307332443|ref|ZP_07611507.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
 gi|306881912|gb|EFN13034.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 211

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 7/108 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           +   +F K S+    E    +++I       + + + + G TD             LS  
Sbjct: 102 QAEVLFGKDSAKLGGEAKARIKEIASEAERQNAKSVRVFGFTDDLGSAGHG---IVLSKQ 158

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336
           RA +  Q L +  +      +I G+        +        NRR+++
Sbjct: 159 RANAVQQALAED-LEPSVNYEIRGYGEQYPIADNASEEGRKRNRRVEV 205


>gi|113477202|ref|YP_723263.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
 gi|110168250|gb|ABG52790.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
          Length = 302

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 77/302 (25%), Gaps = 29/302 (9%)

Query: 41  MTVLMAFFLV-MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           +T+ M   ++  W     +   +  I+        +    S+   ++      +   K  
Sbjct: 22  LTLFMGLMIICAWAFARPNAFKRPDIDVQLTENIDSENVNSQTEENQVTETLETETTKTT 81

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               +     +    I   ++                ++ +   +      +       +
Sbjct: 82  TIETKDAETTTTAKIIYKPSKVNIETTTSTKNPATDRTETTTSAQQPTANTNRIETRTSR 141

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            T+   +   E        +       +      D+     S    L     +  +    
Sbjct: 142 DTEQPTTDKIETTTNTIESTAASQAKPETVSGQTDIVATSDSQEKYLTEAKTLGQIK--- 198

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASP 276
                            F+ +           +  +   +           + GHT    
Sbjct: 199 -----------------FEINEVELSSPAKQTVNSLIPEINKYDPNRVTIKVEGHTSRV- 240

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
               A+ N  +S DRA      L +  +    IS   G  + +    S+P +  N+R  I
Sbjct: 241 --GDAQLNKEISQDRANVVVAYLKEKNLPHQVIS--EGMGYSQPLPNSNPASDINQRTVI 296

Query: 337 LV 338
           ++
Sbjct: 297 IL 298


>gi|228473928|ref|ZP_04058669.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274442|gb|EEK13283.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 388

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           LSK+++     + + +      +        DN+V       T   +L    +++    F
Sbjct: 233 LSKKQMDHNNVQDQKESSIAVQNVKTPEHKGDNLVISEERRRTLEDLLAKYGNKKTPIYF 292

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             ++ +PLP     + +I  +L  + E  I + G+         A  N +LS+ R+ S  
Sbjct: 293 ANNAYVPLPHDTEAMDQIVAMLRDNPELSILLEGYASNV---GTAEYNNQLSMKRSESVA 349

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS-DPMNSANRRIDILV 338
           ++L K G+S  RI         R    S D   +  RR+DI V
Sbjct: 350 RLLQKQGISLQRILTA-----FRGIDDSVDKEKA--RRVDISV 385


>gi|323135988|ref|ZP_08071071.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
 gi|322399079|gb|EFY01598.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
          Length = 341

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 69/234 (29%), Gaps = 19/234 (8%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
              +    + +    L   +            ++   +   Q+    + +       + +
Sbjct: 115 AQPAYQAELQRRVTALAAAANVDASGVGVSGRDVTAPAAIAQNPALMSQIASAPGVRRVI 174

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             +  +  +  +      P   +       R        + I + L     D        
Sbjct: 175 AAAAPIATAAIQPATPSTPTTQEPPAEPSPRTAESPGDPRAILAALPSGALDAAECQRAL 234

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
           +       +          F + S+    +    L K   ++    +  I +RGH D   
Sbjct: 235 DAVAVVDRVE---------FREGSAAITRQAAEALDKAVALIRRCPDVTIEVRGHADD-- 283

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330
                 DN  LS+ RA +  + L + G+   R+  ++G   HR + A   +++ 
Sbjct: 284 ------DNEALSVRRAQAVARYLRREGLGGRRVV-VAGHGAHRARTAKAELDAR 330


>gi|229588858|ref|YP_002870977.1| hypothetical protein PFLU1327 [Pseudomonas fluorescens SBW25]
 gi|229360724|emb|CAY47582.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
          Length = 381

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           + GH DA+     A  +  L+ +RA S   +   SG+ +DR+  + G      + A+D  
Sbjct: 229 VLGHVDAT---GTAPASQALTKERAQSIASIFSLSGLKQDRLM-LRGMGDLMPRAANDSN 284

Query: 327 -MNSANRRIDILVEDR 341
              + NRR++I+   R
Sbjct: 285 QGRALNRRMEIMFTQR 300


>gi|332185559|ref|ZP_08387307.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17]
 gi|332014537|gb|EGI56594.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17]
          Length = 78

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 8/75 (10%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            + G TD        R N  LS  RA +    +    + +  I+    F   R K+    
Sbjct: 1   MVAGFTDT---SGTPRYNMGLSQRRADAVKAYMTSRSIPDGSITT-EAFGEQRDKLRVQT 56

Query: 327 MNS----ANRRIDIL 337
            +      NRR++I 
Sbjct: 57  ADGVREVQNRRVEIT 71


>gi|61655673|gb|AAX49323.1| PlpD [Mannheimia haemolytica]
 gi|61655675|gb|AAX49324.1| PlpD [Mannheimia haemolytica]
          Length = 217

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316
           + +    L++ GV+  +I  + G+ 
Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196


>gi|61655677|gb|AAX49325.1| PlpD [Mannheimia haemolytica]
          Length = 217

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316
           + +    L++ GV+  +I  + G+ 
Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196


>gi|61655683|gb|AAX49328.1| PlpD [Mannheimia haemolytica]
          Length = 217

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316
           + +    L++ GV+  +I  + G+ 
Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196


>gi|61655681|gb|AAX49327.1| PlpD [Mannheimia haemolytica]
 gi|61655685|gb|AAX49329.1| PlpD [Mannheimia glucosida]
          Length = 217

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
              +FD   +    +   V+  + + L  S  + + + G+TD       A  N  LS  R
Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316
           + +    L++ GV+  +I  + G+ 
Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196


>gi|322514054|ref|ZP_08067125.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
 gi|322120071|gb|EFX92042.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
          Length = 106

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 18/89 (20%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + G+TD        + N  LS  RA      L++ GV   +I+ + G+       A D  
Sbjct: 1   MAGYTDRL---GSEKYNLDLSQRRANMVKSRLVQQGVI-VQINAV-GYGKASQVKACDGE 55

Query: 328 NSA--------NRRIDI-----LVEDRQG 343
           +          NRR++I     +++  +G
Sbjct: 56  SGQALRDCLRPNRRVEISANGGVLKQNEG 84


>gi|224437881|ref|ZP_03658828.1| hypothetical protein HcinC1_07905 [Helicobacter cinaedi CCUG 18818]
 gi|313144330|ref|ZP_07806523.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129361|gb|EFR46978.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 238

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 54/195 (27%), Gaps = 24/195 (12%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I ++    L   +++ +   +    +      +   L   +     K +           
Sbjct: 30  ITQKTQEDLKIQNQKLLELNEAMSEIAQNYSNLQQELYEALLKEFEKDLKKWDAHIDEDN 89

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV---------LAHSTEVISIRGHTDASPF 277
           +I       +FD  +         +L                  S E I I GHT  S F
Sbjct: 90  TIRFNEPEVLFDTGAKQVKKRFQDILDDFFPRYVKILSLPKFQDSIEEIRIEGHTSQSWF 149

Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMK-SGVSED-----RISKISGFAHHRLKIASDP 326
                      N  LS  RA    +       +        ++ + +G +  +     D 
Sbjct: 150 SAQTLEERYLGNAELSQARALEVLKYCFNLKKIDSHKEWLIKVFRANGLSFAKPLEDDD- 208

Query: 327 MNSANRRIDILVEDR 341
               +RR++  V  +
Sbjct: 209 ---KSRRVEFRVITK 220


>gi|190893274|ref|YP_001979816.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           CIAT 652]
 gi|190698553|gb|ACE92638.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
           CIAT 652]
          Length = 178

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           +   FD  SS    +    L +  + LA       ++ GH D          N  L   R
Sbjct: 69  DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 125

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333
           A +A   L   GV   R+  IS +   R           S NRR
Sbjct: 126 AAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 168


>gi|71909306|ref|YP_286893.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71848927|gb|AAZ48423.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 188

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD +S+    +    L+     LA      + + G+ D       +  N RL L 
Sbjct: 79  QRSVYFDLNSADIKADYDPALRAHARYLAEHPNARVRVEGNADER---GSSEHNRRLGLK 135

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340
           RA +    ++ +G +E +I  I      R       +   S NRR D++ E 
Sbjct: 136 RAENVRSAMLSNGAAEKQI-AIKTLGEARPKLVGHDEASWSENRRADVIYER 186


>gi|83593747|ref|YP_427499.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83576661|gb|ABC23212.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 347

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 78/290 (26%), Gaps = 14/290 (4%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117
             D   ++ +      +    A +G        +         +     T+    L +G 
Sbjct: 64  TLDELNSVTEGLVADREASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLGVGP 123

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
                           L     +     +             S        +        
Sbjct: 124 AAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVANAPAGSPGPAAVAARPSAAPTSV 183

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L   +  AM        +    +        +++    +        L     +     F
Sbjct: 184 LPASEAPAMPAVPGSGTVVIDSAGVHQE---NSLQGSAVRRLDEAAALAGGGAKVGVVYF 240

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD----NWRLSLDRAY 293
             SSS      + V+ +I +    +  V+ + GH+ +             N R+S +RA 
Sbjct: 241 ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERAD 300

Query: 294 SAYQVLMKSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILVE 339
           +  Q LM +GV    I  +   A     +R  +      + NRR +I +E
Sbjct: 301 AVAQALMSAGVFPANIV-VGAVADDQKEYREVMP--SGEAFNRRAEIFLE 347


>gi|260550726|ref|ZP_05824934.1| small protein A [Acinetobacter sp. RUH2624]
 gi|260406232|gb|EEW99716.1| small protein A [Acinetobacter sp. RUH2624]
          Length = 260

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283
           +  +  + +F    S      + +  +  + + +  S     I + G  D          
Sbjct: 142 VNGRTASVLFAFDRSDASAIQQGLNNIDNVVDQIKQSPSTAPIIVSGFADPL---GKFSY 198

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRI 309
           N  LS  RA +  ++L+K GV  +RI
Sbjct: 199 NQELSSKRANTVAKLLVKQGVDPNRI 224


>gi|254417815|ref|ZP_05031539.1| OmpA family protein [Brevundimonas sp. BAL3]
 gi|196183992|gb|EDX78968.1| OmpA family protein [Brevundimonas sp. BAL3]
          Length = 384

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289
           ++    FD   S    E   V+ +            + I G+TD       A  N  LS 
Sbjct: 276 RQFVVYFDWDRSDLTTEARSVVSQAATYAKSGRPTRVLIVGYTDT---SGSAAYNLGLSN 332

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336
            R+ +    L+  GV+   +  +       L   +        NRR  I
Sbjct: 333 RRSRTVADALVAQGVNGG-VIALDAKGETALAKPTADGVREPLNRRATI 380


>gi|163789576|ref|ZP_02184014.1| Flagellar motor protein [Carnobacterium sp. AT7]
 gi|159875108|gb|EDP69174.1| Flagellar motor protein [Carnobacterium sp. AT7]
          Length = 61

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
            ++G+   R+  + G+  +R K  +        NRR+DIL+ + +
Sbjct: 9   QRTGIDPKRV-SVVGYGEYRPKADNKTKEGRLENRRVDILILNSE 52


>gi|88859106|ref|ZP_01133747.1| putative assembly or transport protein for curli synthesis
           [Pseudoalteromonas tunicata D2]
 gi|88819332|gb|EAR29146.1| putative assembly or transport protein for curli synthesis
           [Pseudoalteromonas tunicata D2]
          Length = 417

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 10/112 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S+   P     L  I  ++  +    I ++G  D      + ++N  LSL R++S 
Sbjct: 311 FRTGSAQLEPVYSEQLNSIVSLVKSTDYLAIELQGFADQR---GLEQENRSLSLARSHSV 367

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL--VEDRQG 343
            Q L   G+ + RI  ++G    +             +RR+ I+  ++ R G
Sbjct: 368 AQYLNNQGIVQQRI-SVAGLGDEQAVYQVTDPEGLFFDRRV-IVKLIDTRSG 417


>gi|288927834|ref|ZP_06421681.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330668|gb|EFC69252.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 383

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            +     E +     ++  +     +  RL +  ++IS     L   N     + +  ++
Sbjct: 211 AQVRDQAEIDGLNAQINSLRGDLSNKDSRLAEKDRQISDLQKALDDCNNQPKTIVKNVKS 270

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
             + ++   + T +F +  ++  P     L+ I   + +  E  + IRG+         A
Sbjct: 271 ETVTNL---QPTVLFRQGKAVIDPAQYAPLELIASYMRNHPEAKVEIRGYASPE---GSA 324

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
             N +LS  RA +    L+K   ++  R++   G  
Sbjct: 325 ELNQKLSNARAQAVKDALVKRYKIAASRLTT-KGMG 359


>gi|189423681|ref|YP_001950858.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
 gi|189419940|gb|ACD94338.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
          Length = 734

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 8/73 (10%)

Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328
            TDA    +    +  LS  R     Q L   G+    ++   GF        +      
Sbjct: 668 FTDA---SSDPHSSLALSHQRVGQVAQELRSRGIM---VAAAEGFGSSLPVADNSTKEGR 721

Query: 329 SANRRIDILVEDR 341
             N R++I +  R
Sbjct: 722 QRNNRVEIWLAKR 734


>gi|303229266|ref|ZP_07316061.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302516039|gb|EFL57986.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 55

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340
           S  R     Q L+ +GV  +R+  I+     +    +   N  + NRR+D+ +  
Sbjct: 2   SERRVQDVAQYLVNNGVDANRLIGIA-NGDAKPVATNATANGKAENRRVDVFIHR 55


>gi|91225058|ref|ZP_01260280.1| flagellar motor protein [Vibrio alginolyticus 12G01]
 gi|91190001|gb|EAS76272.1| flagellar motor protein [Vibrio alginolyticus 12G01]
          Length = 38

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWI 53
             D  P  L  W   +AD M++LM FF+++  
Sbjct: 6  NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLS 38


>gi|237739553|ref|ZP_04570034.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229423161|gb|EEO38208.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 232

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 24/169 (14%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            K+++ ++       + +S +  D   +G+  +       I I D+    +F+    +  
Sbjct: 49  RKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDIDPQTGTIKIDDK---ILFNTGEYLLK 105

Query: 246 PETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           PE    L              E +      I I GHTD          N  LS  RA+  
Sbjct: 106 PEGKKYLNDFVPIYINLLLNDEEVKKELSQIIIEGHTDDV---GSYIYNMELSQKRAFEV 162

Query: 296 YQVLMK-----SGVSE-DRISKISGFAHHRLKIAS--DPMNSANRRIDI 336
            + +        G  E       +G ++ ++   +  +     +RR++ 
Sbjct: 163 IKYIYDEMPNFKGKEELKSYITANGRSNIKVLRDNSGNIDRDKSRRVEF 211


>gi|71907931|ref|YP_285518.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847552|gb|AAZ47048.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 225

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F   S++  P     L ++   L  +   I+I G TD +        N  L+L RA +  
Sbjct: 118 FGLGSAMLSPAARSSLNEVMSALLSAR-QITIIGRTDNT---GPLAFNESLALARALAVR 173

Query: 297 QVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
             L+ +   ++      +          A+D +     NRR++++
Sbjct: 174 DHLLSTHPMLTPT--LSVKARGTCCFIAANDTLAGRTQNRRVELV 216


>gi|307568444|pdb|3OON|A Chain A, The Structure Of An Outer Membrance Protein From Borrelia
           Burgdorferi B31
          Length = 123

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  +S   L +    +  I ++L       I I GHT+         +       RA + 
Sbjct: 21  FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEXHELS---EKRARAI 77

Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340
              L+K  V  +D+I    G+   + K   S P+ + NRR++I + +
Sbjct: 78  GNYLIKXKVKDKDQIL-FKGWGSQKPKYPKSSPLKAKNRRVEITILN 123


>gi|312959447|ref|ZP_07773964.1| OmpA/MotB [Pseudomonas fluorescens WH6]
 gi|311286164|gb|EFQ64728.1| OmpA/MotB [Pseudomonas fluorescens WH6]
          Length = 381

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326
           + GH DA+     A  +  L+ +RA S   +   SG+ +DR+  + G      + A+D  
Sbjct: 224 VLGHVDAT---GTAPASQALTKERAQSIASIFSLSGLKQDRLM-LRGMGDLMPRAANDSN 279

Query: 327 -MNSANRRIDILVEDR 341
              + NRR++I+   R
Sbjct: 280 QGRALNRRMEIMFTQR 295


>gi|313674265|ref|YP_004052261.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312940963|gb|ADR20153.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 571

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 11/170 (6%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           T D E         +     +  E                 +K  +D   K+    +  +
Sbjct: 388 TVDDEVYFHPTADGERGYLASVREEGLGFTDIYMVTHVGNLEKTAKDRISKLKERDNDFI 447

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
            D   + +  +     +   +        F+ +SS         L ++   L       +
Sbjct: 448 TD---EQLEVKRLIDSV---LNISAYQVYFEVNSSEIDESHDQKLIEMANFLKSHQNLGV 501

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            I     +       + N+ LS  RA S  +   ++G+  DR+    GF 
Sbjct: 502 QISAFASSD---GNPKYNYELSNRRAQSVLKFFKENGIESDRL-AARGFG 547


>gi|218674466|ref|ZP_03524135.1| probable outer membrane lipoprotein [Rhizobium etli GR56]
          Length = 178

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L      L  +   +  ++G  D S   +       
Sbjct: 62  ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADDSGSASQMET--- 118

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167


>gi|302036309|ref|YP_003796631.1| hypothetical protein NIDE0942 [Candidatus Nitrospira defluvii]
 gi|300604373|emb|CBK40705.1| exported protein of unknown function, OmpA family [Candidatus
           Nitrospira defluvii]
          Length = 273

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 48/162 (29%), Gaps = 8/162 (4%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
             + E   +    + L           S   A               + I   D  +  +
Sbjct: 49  SQADEAAHSNPSAEALNSSQVSQVLKDSTDHAPVSASIPTTHVDTAPLAIRSTDILHDDI 108

Query: 237 -FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F+        +    LQ+  E L       I ++G+TD          N  L + RA +
Sbjct: 109 HFEIGRKGLTDDGKAALQRHAEFLKSERDWGILLQGYTDQQ---GSRSFNKILGMKRAET 165

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRI 334
             Q LM  GV E  I  +S            SD     NRR+
Sbjct: 166 VKQHLMALGVPESSIRTVS-LGEEGALCIDNSDVCRRMNRRV 206


>gi|124266869|ref|YP_001020873.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
 gi|124259644|gb|ABM94638.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
          Length = 217

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD  S+       V    + +  A ++ ++ +RG TD +          R++ +RA +  
Sbjct: 104 FDFGSARVAIPPDVTAALVED--AKNSPLVLLRGRTDGTTDAPTES---RIARERAAAVR 158

Query: 297 QVLMKSGVSEDRISKISGFAHHRL----KIASDPM--NSANRRIDILVED 340
             L+ +GV   RI        ++        +        NRR++I +  
Sbjct: 159 DYLVAAGVDPARIRAT-----YQPAGDHVADNASAGGRGLNRRVEIELYR 203


>gi|91784930|ref|YP_560136.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
           LB400]
 gi|91688884|gb|ABE32084.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
           LB400]
          Length = 212

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 24/188 (12%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 L  ++ LA  +  +   +A+ + +  + L        +  + +   + +     
Sbjct: 32  QKSTSDLRYQQELANAKASKGDSVARMMQTLGAKLGNGEASGLMTLDRSTNRLTLR---- 87

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI------ 280
               +F++ S+   PE    +  +   LAH         + + G+TD  P          
Sbjct: 88  --DGVFERGSACLTPEARAAIGAVQGELAHFIADNPKARMLVEGYTDNLPVTRPVIDYQR 145

Query: 281 ----ARDNWRLSLDRAYSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
                 DN+ LS  RA  A + L+   S  +  RI  ++G+   R     D  +  NRR+
Sbjct: 146 FCTVYDDNFTLSAARAREARRALLGTISDDAAKRIV-VAGYGESRPLPGVDAADPRNRRV 204

Query: 335 DILVEDRQ 342
           ++     Q
Sbjct: 205 EVQFLVDQ 212


>gi|126728677|ref|ZP_01744492.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
 gi|126710607|gb|EBA09658.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
          Length = 703

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 13/157 (8%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI---IDQRN 233
           P    +    +   R    A  +   L+  VA  + +       R    +         +
Sbjct: 528 PQVSSRGNEERTIYREGTDAATLEQALASQVAPQVGRTFSLNQIRNIDRVRQLVPEVSVD 587

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLS 288
           T  F+ +S+   P+    L  +G  L    +        I GHTDA         N  LS
Sbjct: 588 TINFETNSAAIRPDEAQELAALGNALKAFIDKNPSEVFLIEGHTDAV---GNYAYNLALS 644

Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
             RA S    L +   V  + +  + G+    L + +
Sbjct: 645 DRRAESVALALTEYFKVPPENMV-LQGYGESDLLVPT 680


>gi|269104043|ref|ZP_06156740.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163941|gb|EEZ42437.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 261

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 9/107 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + S  LP     L +   +L       + + GHTD         DN+ L L RA + 
Sbjct: 136 FALNRSELLPAYQQALTQAAAILKRHRHWHVKLVGHTDTQ---GQKHDNYHLGLTRANNV 192

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI--DILV 338
            + L++ GV+  ++  +      +    +    M  ANR++  +ILV
Sbjct: 193 KRFLLEHGVNGHQV-SVLSTGESQAVPDTHSRTMQLANRQVVAEILV 238


>gi|219853797|ref|YP_002470919.1| hypothetical protein CKR_0454 [Clostridium kluyveri NBRC 12016]
 gi|219567521|dbj|BAH05505.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 248

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 31/173 (17%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSS 241
           ++K+L++L  ++   +   V  +I++ +       G+ I+I             +F+ + 
Sbjct: 60  QQKQLKNLRLQVEKVI--GVRQSIIEDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNK 117

Query: 242 SIPLPETIVVLQKIGEVLAHS---------TEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   PE    L K      +             I I GHTD          N  LS  RA
Sbjct: 118 ADIRPEFKSNLDKFIPQYVNVLTSPKYISSVSEIVIEGHTDNI---GDYNYNMDLSQKRA 174

Query: 293 YSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDP--MNSANRRI 334
            S    ++ +               I   +G +  +L   SD       +RR+
Sbjct: 175 NSIVNYILNNNFKNLDSYSKENLKNIITANGRSKSQLIKNSDGSVNQEKSRRV 227


>gi|183222494|ref|YP_001840490.1| hypothetical protein LEPBI_I3149 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912532|ref|YP_001964087.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777208|gb|ABZ95509.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780916|gb|ABZ99214.1| Putative bacterial outer membrane protein; putative signal peptide
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 189

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 268 IRGHTDAS---PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           I GH DAS         + N   S  R+ +    L+K G+  +RI   +     +     
Sbjct: 114 ITGHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVTKAA-GSSKPISGF 172

Query: 325 DPMNSANRRIDILVEDR 341
           D  ++ NRR+   V  +
Sbjct: 173 DEKDAINRRVTFQVVSK 189


>gi|217419973|ref|ZP_03451479.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 576]
 gi|217397277|gb|EEC37293.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 576]
          Length = 517

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513


>gi|167814044|ref|ZP_02445724.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 91]
 gi|167844146|ref|ZP_02469654.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei B7210]
 gi|167892651|ref|ZP_02480053.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 7894]
          Length = 507

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 467

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503


>gi|121598969|ref|YP_991521.1| cytochrome c oxidase, subunit II [Burkholderia mallei SAVP1]
 gi|124385712|ref|YP_001027405.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10229]
 gi|126450607|ref|YP_001082370.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10247]
 gi|167717920|ref|ZP_02401156.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei DM98]
 gi|167736940|ref|ZP_02409714.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 14]
 gi|167822565|ref|ZP_02454036.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 9]
 gi|238563018|ref|ZP_00439522.2| cytochrome c oxidase, subunit II [Burkholderia mallei GB8 horse 4]
 gi|251767567|ref|ZP_02267750.2| cytochrome c oxidase, subunit II [Burkholderia mallei PRL-20]
 gi|254175026|ref|ZP_04881687.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 10399]
 gi|254181939|ref|ZP_04888536.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1655]
 gi|254207100|ref|ZP_04913451.1| cytochrome c oxidase, subunit II [Burkholderia mallei JHU]
 gi|254357584|ref|ZP_04973858.1| cytochrome c oxidase, subunit II [Burkholderia mallei 2002721280]
 gi|121227779|gb|ABM50297.1| cytochrome c oxidase, subunit II [Burkholderia mallei SAVP1]
 gi|124293732|gb|ABN03001.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10229]
 gi|126243477|gb|ABO06570.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10247]
 gi|147752642|gb|EDK59708.1| cytochrome c oxidase, subunit II [Burkholderia mallei JHU]
 gi|148026648|gb|EDK84733.1| cytochrome c oxidase, subunit II [Burkholderia mallei 2002721280]
 gi|160696071|gb|EDP86041.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 10399]
 gi|184212477|gb|EDU09520.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1655]
 gi|238521497|gb|EEP84948.1| cytochrome c oxidase, subunit II [Burkholderia mallei GB8 horse 4]
 gi|243062286|gb|EES44472.1| cytochrome c oxidase, subunit II [Burkholderia mallei PRL-20]
          Length = 517

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513


>gi|254187872|ref|ZP_04894384.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pasteur
           52237]
 gi|254196504|ref|ZP_04902928.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei S13]
 gi|254296011|ref|ZP_04963468.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 406e]
 gi|157806128|gb|EDO83298.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 406e]
 gi|157935552|gb|EDO91222.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pasteur
           52237]
 gi|169653247|gb|EDS85940.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei S13]
          Length = 492

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 396 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 452

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 453 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 488


>gi|254201767|ref|ZP_04908131.1| cytochrome c oxidase, subunit II [Burkholderia mallei FMH]
 gi|147747661|gb|EDK54737.1| cytochrome c oxidase, subunit II [Burkholderia mallei FMH]
          Length = 522

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 426 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 482

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 483 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 518


>gi|86359052|ref|YP_470944.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
 gi|86283154|gb|ABC92217.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
          Length = 178

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 10/133 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +      +  G     +     +++ D+     FD  S+    +    L +  + L    
Sbjct: 43  NSAGDMGLGAGAATPGSTQDFTVNVGDR---IFFDTDSTSIRADAAQTLDRQAQWLGRYP 99

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
               ++ GH D          N  L   RA +    L   GV   R+  IS +   R   
Sbjct: 100 NYQITVEGHADER---GTREYNLALGARRAAATKDYLASRGVPAQRMKTIS-YGKERPVA 155

Query: 323 --ASDPMNSANRR 333
                   S NRR
Sbjct: 156 VCDDISCWSQNRR 168


>gi|167917395|ref|ZP_02504486.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei BCC215]
          Length = 517

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513


>gi|167909366|ref|ZP_02496457.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 112]
          Length = 525

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521


>gi|53718092|ref|YP_107078.1| putative cytochrome c oxidase [Burkholderia pseudomallei K96243]
 gi|53724516|ref|YP_104674.1| cytochrome c oxidase subunit II [Burkholderia mallei ATCC 23344]
 gi|76810581|ref|YP_332086.1| cytochrome c oxidase subunit II [Burkholderia pseudomallei 1710b]
 gi|126455009|ref|YP_001064790.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106a]
 gi|226193702|ref|ZP_03789305.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810693|ref|YP_002895144.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei
           MSHR346]
 gi|242315097|ref|ZP_04814113.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106b]
 gi|254259540|ref|ZP_04950594.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710a]
 gi|52208506|emb|CAH34441.1| putative cytochrome c oxidase [Burkholderia pseudomallei K96243]
 gi|52427939|gb|AAU48532.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 23344]
 gi|76580034|gb|ABA49509.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710b]
 gi|126228651|gb|ABN92191.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106a]
 gi|225934280|gb|EEH30264.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505984|gb|ACQ98302.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei
           MSHR346]
 gi|242138336|gb|EES24738.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106b]
 gi|254218229|gb|EET07613.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710a]
          Length = 525

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521


>gi|319903022|ref|YP_004162750.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319418053|gb|ADV45164.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 411

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------- 234
           K   +   ++ + + +    +    +  +    +     +  I +++ D           
Sbjct: 253 KKATIAPMQQTESIVEYEKPSTEQNIVKD--SVISEHPMKDEIKVTVTDPTERTSSIKFP 310

Query: 235 -PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +S    P     L +I  +L  + +   +I G  D    +     N R+S  RA
Sbjct: 311 IISFSFNSVWIEPSQRTKLHEIKLLLEKNPQTTITISGWCDN---KGSEDVNKRISAKRA 367

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            +    L++ G+S +RI    G                 RR +I
Sbjct: 368 DAVKLWLVRRGISTERIIT-EGCG----IDRQQTDVDKVRRAEI 406


>gi|89053467|ref|YP_508918.1| OmpA/MotB [Jannaschia sp. CCS1]
 gi|88863016|gb|ABD53893.1| OmpA/MotB [Jannaschia sp. CCS1]
          Length = 172

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +  +F    S        VL    + L  + E  + I GH D          N  L   R
Sbjct: 62  DRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQ---GTREYNLALGARR 118

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343
           A +  + L+  GV + R+  IS +   R     + +   S NRR   ++    G
Sbjct: 119 AAAVREYLVSQGVPDARLRTIS-YGKERPLQICSDEACYSQNRRAVTVISAGLG 171


>gi|209546851|ref|YP_002278769.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538095|gb|ACI58029.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 184

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286
           I++      F + S+      +  L      L  +   +  ++G  D S   +       
Sbjct: 68  ILNVGRRIYFKQDSAALDSVAMATLDNQANWLNRNPTWLLKLQGFADDSGSASKMET--- 124

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334
           LS  RA +A   L   GV   R+    G+ + R         S    NRR+
Sbjct: 125 LSQKRADAAMAYLASKGVDTKRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173


>gi|291288745|ref|YP_003505561.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290885905|gb|ADD69605.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 296

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 260 AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           A++ +   I GHTD           DN+ LS  RA      L ++G+  + +  + G   
Sbjct: 213 ANNAKKYVIIGHTDDVRVVPNTEYADNFELSAKRAAFFLNKLTEAGIPAENVQTL-GLGP 271

Query: 318 HRLKIASDP-MNSANRR 333
                 +       NRR
Sbjct: 272 AFPAAPNKKNGQPLNRR 288


>gi|163789217|ref|ZP_02183659.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
           ALC-1]
 gi|159875432|gb|EDP69494.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
           ALC-1]
          Length = 238

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 14/126 (11%)

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280
             +  S  + ++   FD             L      +     E ISI G  D       
Sbjct: 12  FQLAFSQQELKHEVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDR---GS 68

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRR 333
              N  LS  RA +   V   +   E  I+ + G       + +         +   NR+
Sbjct: 69  DNYNLVLSQQRADAIKTVFSNNEFDESVITNVDGKGE---ILLNIVHEENLSKIRGLNRK 125

Query: 334 IDILVE 339
           ++I+V+
Sbjct: 126 VEIIVK 131



 Score = 39.6 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----WRL 287
           +  +F    S    E+  VL KI  +LA  T    +I GH   +     A D       L
Sbjct: 163 DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDAIDRKTKKRNL 222

Query: 288 SLDRAYSAYQVLMKS 302
           S+ RA   Y  L+K 
Sbjct: 223 SVARAKYIYDYLVKK 237


>gi|260777763|ref|ZP_05886656.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605776|gb|EEX32061.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 1581

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 17/157 (10%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++  +KI   L    A +            G  I I    N+           P    + 
Sbjct: 574 ENQQEKIEQVLEKARAASDEITATMVNNSRGAGIKIEFNFNSR--KSELERNAPLFSQLA 631

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310
             + EVL   +   + I GH            N ++S DRA  A Q+L++S  V +DRI 
Sbjct: 632 SALAEVLESESNLRVEIEGHACQVD---TEEANMKVSADRANYAKQLLIESSDVFKDRI- 687

Query: 311 KISGFAHHRL---------KIASDPMNSANRRIDILV 338
            ++ F   +             ++P    NRR++I +
Sbjct: 688 SVAVFGESKPLYIPKKGESIDRNNPNLRQNRRVEIRI 724


>gi|187918870|ref|YP_001887901.1| RND family efflux transporter MFP subunit [Burkholderia
           phytofirmans PsJN]
 gi|187717308|gb|ACD18531.1| efflux transporter, RND family, MFP subunit [Burkholderia
           phytofirmans PsJN]
          Length = 560

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 15/120 (12%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286
           +   +    F   S+    ++   L  +   L A       I G+TD+         N +
Sbjct: 451 LPAGQTAVFFALGSASLDSQSADALAGVARRLLAAPGSRAVISGYTDS---SGSYEANVK 507

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVEDRQG 343
           L+  RA +    L+ +GV   RI         R      +  P    +RR+D+ +    G
Sbjct: 508 LAAARAATVRSALIVAGVDVARIDM------RRPARIVASDAPD--KSRRVDVTLAPSTG 559


>gi|282877841|ref|ZP_06286653.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281300052|gb|EFA92409.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 313

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 74/217 (34%), Gaps = 9/217 (4%)

Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180
           +   Q +      + N         + T+  +  + + +     ++++            
Sbjct: 101 QNGTQPIYPPYPPVQNLMPENAESENSTQTEQLQEQINQLQKQIETLSSTVQDPAVKQQI 160

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           + +       R+Q  +  +++ L     ++     L +  +T  +           F+ S
Sbjct: 161 DSMARQLNNFRVQKDSVIMAAPLEETATESAQNHELVQPAQTAKIAPFDTNIRQVFFEIS 220

Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           S     E    L  + E L ++ +    + G +           N  L++ R  S    L
Sbjct: 221 SDALSKEAKHTLDGLAETLKNNRKLKAELTGFSSQD---GPKAFNRDLAMRRMNSVRTYL 277

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +K GV  +++S +S +           MN+  RR+++
Sbjct: 278 LKKGVHANQVSALS-YG----IDKHSEMNTYARRVEV 309


>gi|222111071|ref|YP_002553335.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
 gi|221730515|gb|ACM33335.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
          Length = 179

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 10/125 (8%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           V+   T     + +        F    +   P     L  + + +    +   + G  DA
Sbjct: 62  VVIMITEDAASVVVEGGVVKFFFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDA 121

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRR 333
           +     A  N  L+  RA +    L   GV+E+++         + +       N+  RR
Sbjct: 122 T---GDAAVNAELAKQRALAVRDALKALGVAEEKVEL------KKPEATQGSGSNAEARR 172

Query: 334 IDILV 338
           +++++
Sbjct: 173 VEVIL 177


>gi|121594411|ref|YP_986307.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
 gi|120606491|gb|ABM42231.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
          Length = 179

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 10/125 (8%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274
           V+   T     + +        F    +   P     L  + + +    +   + G  DA
Sbjct: 62  VVIMITEDAASVVVEGGVVKFFFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDA 121

Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRR 333
           +     A  N  L+  RA +    L   GV+E+++         + +       N+  RR
Sbjct: 122 T---GDAAVNAELAKQRALAVRDALKALGVAEEKVEL------KKPEATQGSGSNAEARR 172

Query: 334 IDILV 338
           +++++
Sbjct: 173 VEVIL 177


>gi|239816681|ref|YP_002945591.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
 gi|239803258|gb|ACS20325.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
          Length = 183

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 11/116 (9%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I + D      F   S+   P     L  + + +  S     + G  D +     A  N 
Sbjct: 78  IRVADGVVNFYFATGSADLAPGAAEALAAVIKGV-ESGRKAVVSGFHDTT---GDAAINE 133

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILVED 340
           +L+  RA +   VL+  GV   ++         R  I +    ++  RR+++ + D
Sbjct: 134 QLAKKRAETVRDVLVGLGVPAGKVDL------QRPAITAGSGNDAQARRVEVKLVD 183


>gi|226953610|ref|ZP_03824074.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
 gi|226835644|gb|EEH68027.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
          Length = 79

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309
           + K+ E LA        I GHTD +        N RLSL RA S    L+ +  V   R+
Sbjct: 4   IAKVAEKLAEYPNATARIEGHTDNT---GPRALNERLSLARANSVKSALVNEYNVDASRL 60

Query: 310 SKISGFAHHRLKIASDPMNS 329
           S   GFA  +    +     
Sbjct: 61  ST-QGFAWDQPIADNKTKEG 79


>gi|332883547|gb|EGK03830.1| hypothetical protein HMPREF9456_01897 [Dysgonomonas mossii DSM
           22836]
          Length = 381

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 10/103 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
           N   F   S++      V +    + L  +      I G+ D       A  N +LS  R
Sbjct: 279 NVVFFRLGSAVIDKNQEVSIYNTAKYLQDNPSKNVKIVGYADKK--TGTASINMKLSEKR 336

Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHH-RLKIASDPMNSANR 332
           A +    L+ K  ++ +R+  +       +    +    + NR
Sbjct: 337 AKNVANALINKYNINSNRVK-VEWKGDTEQPYAEN----AWNR 374


>gi|254476965|ref|ZP_05090351.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
 gi|214031208|gb|EEB72043.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
          Length = 587

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 11/228 (4%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
              S        +   +   +  N   +   + +E      T+    G+ +    D +K+
Sbjct: 346 QPGSNVTTYRFADGSTRTVVVRENGVEVETIRSAEGRVLRRTKLLPDGRSVVLFDDTQKA 405

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
                N  LP + +++      +    +      +       +                +
Sbjct: 406 ERVVVNE-LPQVQEDRSAVSSSRAVSAEDLAAALAAQDAKSVERRFSLAQIRNIDAVRRL 464

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIA 281
           + +   ++  FD  SS+  P+    L  +G  L    +        I GHTDA      A
Sbjct: 465 TPVINVDSVNFDTGSSVIRPQEAEELAALGNALRELIDRNPAEVFLIEGHTDAV---GAA 521

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
             N  LS  RA +    L +   V  + +  + G+    L + +    
Sbjct: 522 TFNLALSDRRAETVALALTEYFDVPPENMV-VQGYGESDLAVRTLTAE 568


>gi|270339927|ref|ZP_06006476.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333289|gb|EFA44075.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 388

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                      +    + ++  L  +++   +       +     +      +   +   
Sbjct: 227 ATWEKTPDVDAIKALSQSQIDALNAQLNDANAENARLKNLLANQPKPETPKAVKEFVTTP 286

Query: 233 NTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +  F+ + +     + +V +Q + +    +   +++ G+ D+         N RLS  R
Sbjct: 287 VSVFFNINRTNIASQKDLVNVQAVAKYAKENGSKLAVTGYADS--ATGTPEINQRLSEGR 344

Query: 292 AYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340
           A +    L+K G+   +IS + G                 S NRR  + V D
Sbjct: 345 AATVADELVKLGIDRSKISTV-GKGGVDDLSPI-------SFNRRATVQVTD 388


>gi|257486672|ref|ZP_05640713.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 160

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335
                 N ++S +RA S   +   SG+  +R+S+  G      + A+D     + NRR++
Sbjct: 3   SGPTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVE 61

Query: 336 IL 337
           IL
Sbjct: 62  IL 63


>gi|282880767|ref|ZP_06289463.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305301|gb|EFA97365.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 314

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 13/202 (6%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK--- 198
             K+S T++S++ K L +  D  +   +  +  +   +  + +    K++    AKK   
Sbjct: 119 QPKSSDTKESQEVKQLQEQIDQLQKQIEVLSQTVKDPTLRQQVESMVKQQNALCAKKDTV 178

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGE 257
           I    +    +   +          + ++  D       F+ SS     E    L  + +
Sbjct: 179 IMRAPANNPTEQCCQEKALVEPAHPVKVTPFDTNLRQVFFEISSKQLSKEAEHTLDAVVD 238

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           VL ++ +  + + G +           N  L++ R  S    L+  GV+ ++IS +S + 
Sbjct: 239 VLKNNRDLKVELTGFSSND---GPKAFNKDLAMKRMNSVRSYLVNHGVNTNQISALS-YG 294

Query: 317 HHRLKIASDPMNSANRRIDILV 338
                     M +  RR+++ +
Sbjct: 295 ----IDKKSEMKTYARRVELCI 312


>gi|237716074|ref|ZP_04546555.1| outer membrane porin F [Bacteroides sp. D1]
 gi|262407686|ref|ZP_06084234.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643794|ref|ZP_06721592.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294808454|ref|ZP_06767207.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298480834|ref|ZP_06999029.1| outer membrane porin F [Bacteroides sp. D22]
 gi|229443721|gb|EEO49512.1| outer membrane porin F [Bacteroides sp. D1]
 gi|262354494|gb|EEZ03586.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292640883|gb|EFF59103.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294444382|gb|EFG13096.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|295085223|emb|CBK66746.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Bacteroides xylanisolvens XB1A]
 gi|298272857|gb|EFI14423.1| outer membrane porin F [Bacteroides sp. D22]
          Length = 379

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++        R   +F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFIPRYVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
               + ++ + + +  + +V ++ G+ D       A  N +LS  RA +   +++   GV
Sbjct: 291 KREYMNIEAMAKGIKATDKVFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348

Query: 305 SEDRI 309
              ++
Sbjct: 349 PASQL 353


>gi|213420068|ref|ZP_03353134.1| hypothetical protein Salmonentericaenterica_20830 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 64

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
            + L   GV   R+  I G         +      + NRR++ILV +
Sbjct: 19  RRCLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVEILVVE 64


>gi|71908555|ref|YP_286142.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
 gi|71848176|gb|AAZ47672.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
          Length = 425

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 13/187 (6%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            ++ D   + + +    L   +       + +                  A    K V +
Sbjct: 243 AEAIDAYDAGHYQNALELYGSALATPAGNQFRVHNGIYLAHWKLGHRQQAAAAFGKIVDY 302

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
                 + +  + +  +  F + + +  P   + L+ I +    S   + + GHT  +  
Sbjct: 303 GLEHRRLAVKFLFRPGSTAFVQDAKLSGP-YPLWLKTIAQRSGGSANCLEVTGHTSPT-- 359

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSED---RISKISGFAHHRLKIAS---DPMNSAN 331
                 N RLSL RA    + L  +G+S     R+   +G    +  + +   D  ++ +
Sbjct: 360 -GPEPLNERLSLLRAEYVKERL--AGMSPSLAKRMIA-NGVGSRQTLVGTGRDDASDALD 415

Query: 332 RRIDILV 338
           RR++  V
Sbjct: 416 RRVEFKV 422


>gi|167901146|ref|ZP_02488351.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei NCTC
           13177]
          Length = 507

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 411 FETGKSELPADAKDAIAAAAEYVRAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 467

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503


>gi|48429443|gb|AAT42489.1| HMP-like outer membrane protein [Acinetobacter junii]
          Length = 284

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ + L         I GHTD +      + N RLSL RA
Sbjct: 202 RVFFDTNKSNIKDQYKPEVAKVADALNTFPNATARIEGHTDNT---GPRKLNERLSLARA 258

Query: 293 YSAYQVLM-KSGVSEDRISKISGFA 316
            S    L+ +  +   R+S   GFA
Sbjct: 259 NSVKSALVSEYNIDASRLST-QGFA 282


>gi|197337147|ref|YP_002158389.1| OmpA family protein [Vibrio fischeri MJ11]
 gi|197314399|gb|ACH63848.1| OmpA family protein [Vibrio fischeri MJ11]
          Length = 1590

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 31/182 (17%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS----IIDQ 231
             + ++K  A K +  + ++A +    +       +      +     + I       D 
Sbjct: 565 EEIVEQKKKAEKARGNMAEVASEYLKHIPVWTETQLEINKENKQAFEQLTIKNKTLFNDD 624

Query: 232 RNTPM---FDKSSSIPLPETIVV-LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
             + +   F+          +   + +I   L    +  I I GHT         + N  
Sbjct: 625 YGSGIEVVFEFDKKTADTSMVRQGIAEIVSFLEKQPDVHIVIEGHTCQV---GTNQYNMN 681

Query: 287 LSLDRAYSAYQVLMKSGVSEDRI---SKISGFAHHRLKIASDPMNS---------ANRRI 334
           LS  RA +   +         ++     +  F   +  +                 NRR+
Sbjct: 682 LSQQRAQNVADLF------PKKLQEKITVIAFGETQPLV-EATGREVSSDNLKLKVNRRV 734

Query: 335 DI 336
            I
Sbjct: 735 KI 736


>gi|126442214|ref|YP_001057542.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 668]
 gi|134279592|ref|ZP_01766304.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 305]
 gi|126221707|gb|ABN85213.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 668]
 gi|134248792|gb|EBA48874.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 305]
          Length = 525

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 429 FETGKSELPADAKDAIAAAAEYVRAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521


>gi|254523963|ref|ZP_05136018.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14]
 gi|219721554|gb|EED40079.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14]
          Length = 2015

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/235 (10%), Positives = 59/235 (25%), Gaps = 8/235 (3%)

Query: 73   GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
              ++      +          +       +           +   T      +   +   
Sbjct: 1754 LADVHGGDARLGRNFIIKLDPATVPAGAELTTENPLLRRVTQGVPTRFSFGVRLPPSPQA 1813

Query: 133  YLSNSQQSEH----CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                 + +         S    ++    L K  ++       +         + +   + 
Sbjct: 1814 SAERMELALGEVLFAPGSSELRADYRPVLLKMAEVVNRYQGGDVVIAANGESQALAFARA 1873

Query: 189  KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                  L  +++ +    +   +   V    +    + +        +FD   +    E 
Sbjct: 1874 AVVRDALQAEVAESARAGLTVQLRTDVQDPHSLLAGVDANGALLGNVLFDTDKAAVREEF 1933

Query: 249  IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              +L  I   L       +S+ GHTD    R     N  L L RA + ++ L   
Sbjct: 1934 KPLLAAIAARLEKMGGGQVSLVGHTD---VRGSHAYNQALGLRRASAVFEALRSQ 1985


>gi|332830269|gb|EGK02897.1| hypothetical protein HMPREF9455_01147 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 383

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           N   F   S+       V +    + L  +    + + G+ D          N +LS  R
Sbjct: 281 NVVFFRLGSANIDKNQEVSIFNTAKYLQDNPSAKVKVVGYADKK--TGTPSINEKLSEKR 338

Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
           A +    L+K   +  +R+  +       +    +    + N R+ I V
Sbjct: 339 AKNVANELIKKYNIDSNRV-TVEWKGDTVQPYAEN----AWN-RVAIFV 381


>gi|218961922|ref|YP_001741697.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730579|emb|CAO81491.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 201

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 20/154 (12%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +    +      +        I+I         +F+   S    + +  +++  + L
Sbjct: 45  QKDIDDFKSMFKSLDLELNQENNEIII-----PADILFEFDKSELKSDNLPKIRQFRKKL 99

Query: 260 AHST--------EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV--SEDRI 309
            +            I I GHTD          N++LSLDR+ S  +   +       D  
Sbjct: 100 KNYMQVGDRKKRYCIIIEGHTDTV---GDKNYNYKLSLDRSLSLIKEFKEDDFFRDPDID 156

Query: 310 SKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
              + F   +L + +  + +N  NRR+ I +  +
Sbjct: 157 LIPAAFGESKLAVPTPDNTINKKNRRVVIRIVPK 190


>gi|153953154|ref|YP_001393919.1| hypothetical protein CKL_0517 [Clostridium kluyveri DSM 555]
 gi|146346035|gb|EDK32571.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 245

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 31/173 (17%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSS 241
           ++K+L++L  ++   +   V  +I++ +       G+ I+I             +F+ + 
Sbjct: 57  QQKQLKNLRLQVEKVI--GVRQSIIEDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNK 114

Query: 242 SIPLPETIVVLQKIGEVLAHS---------TEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +   PE    L K      +             I I GHTD          N  LS  RA
Sbjct: 115 ADIRPEFKSNLDKFIPQYVNVLTSPKYISSVSEIVIEGHTDNI---GDYNYNMDLSQKRA 171

Query: 293 YSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDP--MNSANRRI 334
            S    ++ +               I   +G +  +L   SD       +RR+
Sbjct: 172 NSIVNYILNNNFKNLDSYSKENLKNIITANGRSKSQLIKNSDGSVNQEKSRRV 224


>gi|270157638|ref|ZP_06186295.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269989663|gb|EEZ95917.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 230

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 30/173 (17%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K  ++    ++  L    A ++ +          I     D     +FD  SS+  P   
Sbjct: 43  KEFEETKSDLAQALQKEFAKDLSQWNAELLGDMTIRFDNPD----VLFDTGSSVVKPAFK 98

Query: 250 VVLQKI---------GEVLAHSTEVISIRGHTD-----ASPFRNIARDNWRLSLDRAYSA 295
            +L             E   +S + I I GHT       +  +     N RLS +RA S 
Sbjct: 99  RILNDFIPRYISLVSSEKYRNSIKEIRIEGHTSKKWALDTDEKTAYIKNMRLSQERAQSM 158

Query: 296 YQVLMKSGVSE--------DRISKISGFAHHRLKIASDPMNSANR--RIDILV 338
            + ++   +           +    SGF+  +       +   NR  R++ ++
Sbjct: 159 LEYILS--LPSLLEHEKWMRKYLTSSGFSSSKPVFNQLHIADDNRSQRVEFVI 209


>gi|332881530|ref|ZP_08449179.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680528|gb|EGJ53476.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 377

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 12/147 (8%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 +S  +  A  + + LQ+  K IS     L      K     T        +   
Sbjct: 222 AALNATISSMEAEAAGKDRALQNAQKTISDLQKDLNDCKNKKVPTTTTQA------VEKS 275

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
               +F +SSS      +  + ++   L  ++   +SI G+         A+ N +LS  
Sbjct: 276 EYVVIFRQSSSKVDALQMPNIDRLASYLKKNSSAKVSISGYASPE---GNAKFNQKLSEK 332

Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFA 316
           RA +   +L+K  G+S +RI    G  
Sbjct: 333 RAEAVKNILVKEYGISANRIET-QGKG 358


>gi|149202957|ref|ZP_01879928.1| OmpA/MotB [Roseovarius sp. TM1035]
 gi|149143503|gb|EDM31539.1| OmpA/MotB [Roseovarius sp. TM1035]
          Length = 518

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 53/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    ++   +    A  I+   + +  + + + V        +  +         F+ 
Sbjct: 361 DQTPEEIEINAQGDRFANAIAQAGTEVGLEELQRMVRVLGPLKRLTTTFR-------FEA 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S     ++    +++   +               S     A  N  ++L RA +  + +
Sbjct: 414 GSVRLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVQRAV 473

Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           M++  +   +RI  ++  F         D       NRR+++ V 
Sbjct: 474 MRAAETANLERIGLELDAFGEAMPMACDDTAWGRQVNRRVEVWVR 518


>gi|325279593|ref|YP_004252135.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324311402|gb|ADY31955.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 377

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPMF 237
           +  K   +        +     + L     +  V             + I++   +T  F
Sbjct: 219 TAPKQAVIDEMAAANLVLANQVTQLQNRPPEIKVIEKEVVRPVETKNVEIVESIPSTIPF 278

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
             +S++       ++  IG  + ++ +  I I G+ D          N R+S +RA +  
Sbjct: 279 KFNSAVVQDIYDPLIYNIGTFMKNNPDVKIRIVGYADKF---GPINVNLRISQERAEAVA 335

Query: 297 QVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANR--RIDIL 337
            +L K  G++ +R+  I      +    ++     NR   ++I+
Sbjct: 336 NMLKKDYGINSNRMV-IEYVGKEKPYYNNNNKW--NRCAMVEII 376


>gi|29346915|ref|NP_810418.1| hypothetical protein BT_1505 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338813|gb|AAO76612.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
          Length = 362

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V +      + E  +    + I   +    F  +S+    +    +  + E L   +
Sbjct: 232 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHS 291

Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF-AHH-RL 320
              +S+ G+ D          N  LS  RA +  ++L   GV  DRI  + G+     + 
Sbjct: 292 AAKVSVTGYADKE--TGNPNINMTLSEKRAKNVIEMLKAKGVVADRI--VIGYKGDTVQP 347


>gi|300309835|ref|YP_003773927.1| outer membrane protein peptidoglycan-associated (lipo)protein
           [Herbaspirillum seropedicae SmR1]
 gi|300072620|gb|ADJ62019.1| outer membrane protein peptidoglycan-associated (lipo)protein
           [Herbaspirillum seropedicae SmR1]
          Length = 232

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 27/171 (15%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             ++    +   L    + ++ +          + I   D   T +F   S+   P+   
Sbjct: 46  EFEETKSDMLQALQKEFSRDLKQW--NAELLGDMTIRFNDP--TVLFATGSAELRPKFKQ 101

Query: 251 VLQKIG---------EVLAHSTEVISIRGHTD-----ASPFRNIARDNWRLSLDRAYSAY 296
           +L+            +    + + I I GHT      ++  +     N  LS  R  SA 
Sbjct: 102 ILRDFFPRYVTMLTSDKYRDAIKEIRIEGHTSRSWTNSTDTKTAYFLNMELSQARTRSAL 161

Query: 297 QVLMKSGVSEDRI------SKISGFAHHRLKIASDPMNS---ANRRIDILV 338
           + L++    E +          +G +  +     D   +   AN+R++  +
Sbjct: 162 EFLLRLPAVERQQDWLVGHVTANGLSSSKPISPDDNSAAAQLANQRVEFRI 212


>gi|160883800|ref|ZP_02064803.1| hypothetical protein BACOVA_01772 [Bacteroides ovatus ATCC 8483]
 gi|156110885|gb|EDO12630.1| hypothetical protein BACOVA_01772 [Bacteroides ovatus ATCC 8483]
          Length = 379

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++         +   F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
               + ++ + + +  + +V +I G+ D       A  N +LS  RA +   +++   GV
Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348

Query: 305 SEDRI 309
              ++
Sbjct: 349 PASQL 353


>gi|257126467|ref|YP_003164581.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
 gi|257050406|gb|ACV39590.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
          Length = 197

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 22/178 (12%)

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISS---TLSGLVADNIVKGVLFETTRTGIL 225
            + +         KI      K+ +   K +       + +V D +   +  E  +  + 
Sbjct: 9   AKNDQTEQAEKYYKIAIQNGSKKAEKNLKILEKFPLMSNPMVMDYLAWDIPMEDAKGELK 68

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIAR 282
           ISI        F ++           ++ I   + +           G++D +       
Sbjct: 69  ISIRG------FKENGKDLNEFERNRMKGIVRKIWNKLYESADLEFIGYSDNTE------ 116

Query: 283 DNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            N +LSL+RA    ++  +SG+  E RI K+ G         +D +     NRR++I+
Sbjct: 117 -NKKLSLERAKRLAELFRESGLKDEMRIVKVLGKGSENSSDTNDTVEGRYNNRRVEII 173


>gi|152968039|ref|YP_001363823.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
 gi|151362556|gb|ABS05559.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
          Length = 180

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 38/118 (32%), Gaps = 18/118 (15%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR- 291
             +F   S+         L  IG  +       I + GHTD          N  LS  R 
Sbjct: 70  DVLFAFGSADLPASAAGQLAGIGARIGRGHPTAIRVEGHTDGI---GDDAANQSLSERRA 126

Query: 292 -AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRRIDILVED 340
            A +A      +GV      +  GF   R                 +ANRR+ +++ D
Sbjct: 127 AAVAAALSAAAAGVP----VQQEGFGETRPLRPETTASGEDDPAARAANRRVTVVLRD 180


>gi|326776942|ref|ZP_08236207.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326657275|gb|EGE42121.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 215

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             +   + + G TD       A     LS  RA + + VL K  +      +I G+    
Sbjct: 133 KQNATKVRVFGFTDNL---GSAAHGDVLSKQRADAVHGVLSKE-LGATITYEIRGYGEQY 188

Query: 320 LKIASDPMNSA--NRRIDI 336
              ++        NRR+++
Sbjct: 189 PIASNSNEEGRKKNRRVEV 207


>gi|254468321|ref|ZP_05081727.1| OmpA/MotB [beta proteobacterium KB13]
 gi|207087131|gb|EDZ64414.1| OmpA/MotB [beta proteobacterium KB13]
          Length = 165

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           + +  FD       PE + ++    +  A      ++++GH D   +R     N  L   
Sbjct: 58  QRSIYFDFDKFEVKPEYLDIVNAHAQYAADHPAAKMTLKGHAD---YRGSHEYNLALGQK 114

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336
           R+ S   V+  SG S+ +I  +S +        +   N  S +RR+DI
Sbjct: 115 RSVSVKDVMNTSGASDGQIETVS-YGEEE-ANQNCQGNECSQDRRVDI 160


>gi|301164479|emb|CBW24037.1| putative membrane protein [Bacteroides fragilis 638R]
          Length = 445

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254
            +++   ++ L         + +       I   ++     F + S+          L +
Sbjct: 303 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 362

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I + L    E+  I  GH D +        N ++SL RA +    L K G+   RI  + 
Sbjct: 363 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 418

Query: 314 G 314
           G
Sbjct: 419 G 419


>gi|260170794|ref|ZP_05757206.1| outer membrane porin F precursor [Bacteroides sp. D2]
 gi|293372828|ref|ZP_06619206.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|299149162|ref|ZP_07042223.1| outer membrane porin F [Bacteroides sp. 3_1_23]
 gi|315919128|ref|ZP_07915368.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|292632203|gb|EFF50803.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|298512829|gb|EFI36717.1| outer membrane porin F [Bacteroides sp. 3_1_23]
 gi|313693003|gb|EFS29838.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 379

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++         +   F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
               + ++ + + +  + +V +I G+ D       A  N +LS  RA +   +++   GV
Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348

Query: 305 SEDRI 309
              ++
Sbjct: 349 PASQL 353


>gi|253566150|ref|ZP_04843604.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265766901|ref|ZP_06094730.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|251945254|gb|EES85692.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263253278|gb|EEZ24754.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 435

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254
            +++   ++ L         + +       I   ++     F + S+          L +
Sbjct: 293 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 352

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I + L    E+  I  GH D +        N ++SL RA +    L K G+   RI  + 
Sbjct: 353 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 408

Query: 314 G 314
           G
Sbjct: 409 G 409


>gi|60683014|ref|YP_213158.1| hypothetical protein BF3556 [Bacteroides fragilis NCTC 9343]
 gi|60494448|emb|CAH09244.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
          Length = 445

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254
            +++   ++ L         + +       I   ++     F + S+          L +
Sbjct: 303 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 362

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I + L    E+  I  GH D +        N ++SL RA +    L K G+   RI  + 
Sbjct: 363 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 418

Query: 314 G 314
           G
Sbjct: 419 G 419


>gi|53715052|ref|YP_101044.1| putative outer membrane protein [Bacteroides fragilis YCH46]
 gi|52217917|dbj|BAD50510.1| putative outer membrane protein [Bacteroides fragilis YCH46]
          Length = 442

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254
            +++   ++ L         + +       I   ++     F + S+          L +
Sbjct: 300 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 359

Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           I + L    E+  I  GH D +        N ++SL RA +    L K G+   RI  + 
Sbjct: 360 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 415

Query: 314 G 314
           G
Sbjct: 416 G 416


>gi|237722141|ref|ZP_04552622.1| outer membrane porin F [Bacteroides sp. 2_2_4]
 gi|229447951|gb|EEO53742.1| outer membrane porin F [Bacteroides sp. 2_2_4]
          Length = 379

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++         +   F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304
               + ++ + + +  + +V +I G+ D       A  N +LS  RA +   +++   GV
Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348

Query: 305 SEDRI 309
              ++
Sbjct: 349 PASQL 353


>gi|160944675|ref|ZP_02091902.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443859|gb|EDP20863.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii
           M21/2]
          Length = 246

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 26/185 (14%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 L +++ + + ++ ++  +       +  L  +     +  +       I+    
Sbjct: 47  EAKQAELEEKEQIILNQQSQIDTIVGVRGDLIDALSKEFSGNDLSVKVDAQSGAITF--- 103

Query: 232 RNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASPFRNIAR 282
            +T +F  +           L +          G+  +     I I GHTD         
Sbjct: 104 DSTLLFGYNDDKLQDSGKTFLAEFLPKYFSVLLGKDFSPYVAEIIIEGHTDTD---GGYM 160

Query: 283 DNWRLSLDRAYSAYQV--------LMKSGVSEDR-ISKISGFAHHRLKIASDP--MNSAN 331
            N +LS +RA++            L  S + E R +   +G +      A+D      A+
Sbjct: 161 YNLQLSQNRAFAVVSYCLDENNHFLSDSQLEELRVLLTANGRSWSAPIYAADGTVDMQAS 220

Query: 332 RRIDI 336
           RR++I
Sbjct: 221 RRVEI 225


>gi|153808398|ref|ZP_01961066.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
 gi|149128720|gb|EDM19937.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
          Length = 274

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           I +   +    F  +S+    E    +  + E L  +    I I G+ D +     A  N
Sbjct: 166 IVVEPMKQNIFFALNSARIQDEQQQKISSLVEYLEKNPAAKICITGYADVN--TGNATIN 223

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVED 340
           ++LS  RA +  + L   G++ DRI  +       +             R+ I + +
Sbjct: 224 FKLSEARAKNVAEALKSKGIAADRIK-VDFKGDTVQPYST-----PKENRVSICITE 274


>gi|254486102|ref|ZP_05099307.1| conserved hypothetical protein [Roseobacter sp. GAI101]
 gi|214042971|gb|EEB83609.1| conserved hypothetical protein [Roseobacter sp. GAI101]
          Length = 66

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 280 IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332
              DNW+L   RA S  + ++   G++ DR+    GF  +      D  ++   NR
Sbjct: 3   AFADNWKLIQARALSVVKYMINFLGIAPDRL-AAKGFGRYHPVPEGDSESARAHNR 57


>gi|237727280|ref|ZP_04557761.1| outer membrane protein 40 [Bacteroides sp. D4]
 gi|229434136|gb|EEO44213.1| outer membrane protein 40 [Bacteroides dorei 5_1_36/D4]
          Length = 408

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 18/162 (11%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            +  +  + +L +KI+   +  +   +V  V  E  +  +L        T  F       
Sbjct: 259 EVNDQAWVDELNRKINEERNKPIPAPVVTEVKKEVVKNEML------GMTVSFIIDKYNI 312

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
                  + +  + L    E  + + G+ D          N +LS  RA +   +++K  
Sbjct: 313 TDIQKKNVAEAAKYLEDHPEVNLIVTGYADVQ--TGNPAYNLKLSQRRAEAVCNMMVKEF 370

Query: 303 GVSEDRISKISGFAHH-RLK-IASDPMNSANRRIDILVEDRQ 342
           GV   RI ++       +   + ++       R+ + + + +
Sbjct: 371 GVDPSRI-RVDYKGDSLQPYQLKNEWN-----RVVVFITEAR 406


>gi|124514981|gb|EAY56492.1| putative Outer membrane protein, OmpAfamily [Leptospirillum
           rubarum]
          Length = 521

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 5/121 (4%)

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            +   +    +    G+L    +  +       R    F    +        +L++   +
Sbjct: 51  AAEARADPPGNTPGPGMLLHQDKKLLRRIQDLSRKDLSFATGKADLNQRDRRILREDAVL 110

Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
           L    +  I + GH+D          N+RL LDR  SA Q L   G++  RI  +S F  
Sbjct: 111 LKRYPKVEILLIGHSDER---GNQIYNFRLGLDRGKSARQFLESLGIAASRIHVVS-FGK 166

Query: 318 H 318
            
Sbjct: 167 R 167


>gi|327404085|ref|YP_004344923.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319593|gb|AEA44085.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 725

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLK 321
           +  HTD          N  LS +RA + Y+ L+ + GV   RI  + G      +
Sbjct: 588 LSSHTDPR---GNDVYNQVLSENRAKACYKYLVEEKGVDPRRIIPV-GKGEREPR 638


>gi|288801265|ref|ZP_06406720.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331876|gb|EFC70359.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 401

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 9/131 (6%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +   L     +I+     L   N     + +  +   + ++   + T +F +  S+  P 
Sbjct: 256 KDAELNGKDARIADLQKALQDANNRPVAVVKEVKETTVTNL---QPTVLFRQGKSVIDPA 312

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
               ++ I   + +     + IRG+         A  N +LS  RA +    L+K   ++
Sbjct: 313 QYAPIELIASYMRNHPTAKVEIRGYASPE---GNAEFNQKLSTARAEAVKTALVKRYKIA 369

Query: 306 EDRISKISGFA 316
             R++   G  
Sbjct: 370 ASRLTT-KGMG 379


>gi|308448969|ref|XP_003087813.1| hypothetical protein CRE_11630 [Caenorhabditis remanei]
 gi|308252596|gb|EFO96548.1| hypothetical protein CRE_11630 [Caenorhabditis remanei]
          Length = 264

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 32/153 (20%)

Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGEVLAHST 263
                 +  G+  ++      +S   Q  + +F    S     +   V+ KI + +  + 
Sbjct: 123 EQCQGLMAWGINNQSATEQTALSATGQSASVLFYFDHSDKNGVKNPEVISKIADQIKQTD 182

Query: 264 EV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321
               I + G+TD          N RLS  RA +   +L + G+  D+I         +  
Sbjct: 183 GNSKIFVAGYTDRL---GSFPYNQRLSAARANTVVDLLKQQGIPADQI---------QFS 230

Query: 322 IASDPM-----------------NSANRRIDIL 337
             +                     + NRR++I 
Sbjct: 231 AENKTDVYQKCNGMNKKIQLVECLAPNRRVNIT 263


>gi|167579701|ref|ZP_02372575.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis TXDOH]
          Length = 507

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQIV 467

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503


>gi|257092025|ref|YP_003165666.1| membrane-bound proton-translocating pyrophosphatase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257044549|gb|ACV33737.1| V-type H(+)-translocating pyrophosphatase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 806

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   S+    +    L+ I      +    ++I G  D          N  ++ +RA 
Sbjct: 709 VYFATGSAELPADATKTLEVIVVHAKANPGAKLAISGFHD---PSGSQAVNEEVAKNRAK 765

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVE 339
           +    L   G++E+RI         + ++ +   DP  +  RR+++ V+
Sbjct: 766 AVRDSLKNVGIAEERIEL------RKPEVTTGGGDPAEA--RRVEVSVQ 806


>gi|225024563|ref|ZP_03713755.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC
           23834]
 gi|224942714|gb|EEG23923.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC
           23834]
          Length = 176

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTD 273
                    I++            ++  LPE    L ++ E L       + I++ GHTD
Sbjct: 41  VVAAPQVERINLSADALFRFNQSDAADMLPEGKATLDRLAENLVSRQAHIDSIALTGHTD 100

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
                   + N+ L L RA +    L   GV       ++     +    +   
Sbjct: 101 RL---GSEQYNYNLGLRRAQTVKNYLQDKGVQAP--ISVASAGESQPVTTACTG 149


>gi|91224838|ref|ZP_01260098.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
 gi|91190384|gb|EAS76653.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
          Length = 1581

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 22/196 (11%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           K      + NK+ +       +     + +    +         L   + D   +     
Sbjct: 532 KKAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEEKLEQALKD--ARDQSGN 589

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPL-----PETIVVLQKIGEVLAHSTE-VISIRGHT 272
                ++ S         F  +S         P    +   +  VL +     + I GH 
Sbjct: 590 QIDAILVNSSRGAGIKIEFAFNSREKELKDHAPIFKQLAASLANVLENEPNLRVEIEGHA 649

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------I 322
                    + N ++S +RA  A ++LMK   V E R+  ++ F   +            
Sbjct: 650 CQV---GTEKANMQVSAERAEYAKKLLMKEFPVFEGRV-SVAAFGESKPVYVPKQGEKVD 705

Query: 323 ASDPMNSANRRIDILV 338
            ++P    NRR+ I +
Sbjct: 706 RNNPNLRQNRRVVIRI 721


>gi|288958040|ref|YP_003448381.1| MotB protein [Azospirillum sp. B510]
 gi|288910348|dbj|BAI71837.1| MotB protein [Azospirillum sp. B510]
          Length = 240

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%)

Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73
            I  +    D        W I + D +++++AFF++M+ ++  + +    + +      
Sbjct: 5  PGIPNRAGTDDHAGQRKTLWLISFTDLISLMLAFFVLMYSMSEPEAERWTRLAKGVAQSI 64

Query: 74 KNLMTASKGIFDEQNPPER 92
              + +    D    P  
Sbjct: 65 PAARSTASAPSDRPADPGA 83



 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 5/160 (3%)

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            K + +S    +S     +                 +   DL    +   S L ++  + 
Sbjct: 57  AKGVAQSIPAARSTASAPSDRPADPGAAFNAMAVEARAAIDLDYLAALLGSQLRSNVELA 116

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V        ++I +       +FD + +   PE   VL  +G V+      I + GH +
Sbjct: 117 VVDVRREDDRVVIRL---PGERIFDLTGAAFTPEGRRVLFLLGAVIGRIGNRIELVGHAE 173

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
                      W  +L RA +    L ++G   D +++  
Sbjct: 174 HEDSTGGVA--WERALTRAVAVSAALRETGYRRDLVARAV 211


>gi|206603884|gb|EDZ40364.1| Putative Outer membrane protein, OmpAfamily [Leptospirillum sp.
           Group II '5-way CG']
          Length = 521

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 5/119 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
              +   A+   +G+L    +  +       R    F    +        +L++   +L 
Sbjct: 53  EARADPPANTPGEGMLLHQDKKLLRRIQDLSRQDLSFATGKADLNQRDRRILREDAVLLK 112

Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
              +  I + GH+D          N+RL LDR  SA Q L   G++  RI  +S F   
Sbjct: 113 RYPKVEILLIGHSDER---GNEIYNFRLGLDRGKSARQFLEDLGIAASRIHVVS-FGKR 167


>gi|32475799|ref|NP_868793.1| MotB-like protein [Rhodopirellula baltica SH 1]
 gi|32446342|emb|CAD76170.1| probable MotB homolog [Rhodopirellula baltica SH 1]
 gi|327540987|gb|EGF27543.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47]
          Length = 251

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/223 (8%), Positives = 63/223 (28%), Gaps = 1/223 (0%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT-DDDTKKAIEQYFNPFGKNLMTAS 80
             +     +  W + + D M++L+ FF+++  ++   +++T +A+            T  
Sbjct: 2   DDEPEEIGIPEWVVTFGDMMSLLLTFFIMLVSLSEIKEEETYQALVDSMQQQFGYKRTLE 61

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
                +  P              +        +   +   ++ + R+       +     
Sbjct: 62  ALAPGDAKPRSMEFSVLSTTGRAKKKDTARGGVPEKAPIGEEHHVRIVRPGHMTAVGSVV 121

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                S        + L ++    +   +         ++     +   + +    ++ +
Sbjct: 122 FFEVGSDLLTPASQRILEQTAQQLRGKPQRIEVRGHVSAEYAARTVGTDEAMLLAIRRAA 181

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
           +    LV+   +    F  +       I        F   S +
Sbjct: 182 AVKRYLVSKQGIASDRFRVSSAEATEPITRNATITKFGNDSRV 224



 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 21/206 (10%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL--QDLAKKISSTL 203
           S  ++ E  + L  S   +    +      P  +K + +                    +
Sbjct: 35  SEIKEEETYQALVDSMQQQFGYKRTLEALAPGDAKPRSMEFSVLSTTGRAKKKDTARGGV 94

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                      V          +      +   F+  S +  P +  +L++  + L    
Sbjct: 95  PEKAPIGEEHHVRIVRPGHMTAV-----GSVVFFEVGSDLLTPASQRILEQTAQQLRGKP 149

Query: 264 EVISIRGHTDAS---PFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319
           + I +RGH  A               L++ RA +  + L+ K G++ DR  ++S      
Sbjct: 150 QRIEVRGHVSAEYAARTVGTDEA-MLLAIRRAAAVKRYLVSKQGIASDRF-RVSSAEATE 207

Query: 320 LKIASDP-----MNSANRRIDILVED 340
               +        +S   R+++ + D
Sbjct: 208 PITRNATITKFGNDS---RVEVFLLD 230


>gi|260550724|ref|ZP_05824932.1| LOW QUALITY PROTEIN: small protein A [Acinetobacter sp. RUH2624]
 gi|260406230|gb|EEW99714.1| LOW QUALITY PROTEIN: small protein A [Acinetobacter sp. RUH2624]
          Length = 88

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           + +T  I + G TD          N +LS  RA +  ++L++ G+   RI +I   +   
Sbjct: 6   SQTTNPIIVSGFTDRL---GKFSYNQQLSSQRANTVAKLLVQQGIEASRI-QIQANSQTD 61

Query: 320 LK---IASDPMN-----SANRRIDI 336
           L      ++        + NRR++I
Sbjct: 62  LYKQCSGNNSSQLIQCLAPNRRVNI 86


>gi|170691537|ref|ZP_02882702.1| cytochrome c oxidase, subunit II [Burkholderia graminis C4D1M]
 gi|170143742|gb|EDT11905.1| cytochrome c oxidase, subunit II [Burkholderia graminis C4D1M]
          Length = 552

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 19/111 (17%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
             +  FD   S    +    ++          +   ++ G TDA      A  N +L+  
Sbjct: 447 PASVYFDTGKSTLPADAKAAVEAASAYAKAHPDAKFTLSGFTDA---SGSADTNAKLAKS 503

Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           RA +    L  +G++ED I       I+G    +         +  RR++I
Sbjct: 504 RAEAVRDALKAAGIAEDHIILKKPETITGGGDAK--------EA--RRVEI 544


>gi|270339928|ref|ZP_06006481.2| outer membrane protein [Prevotella bergensis DSM 17361]
 gi|270333294|gb|EFA44080.1| outer membrane protein [Prevotella bergensis DSM 17361]
          Length = 376

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 8/147 (5%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   +         VA         E T   +   I   R    F  +           +
Sbjct: 235 ETKPEPAPEPTQEYVAPTPTPTPAPEPTPEPVAKKIEPIRRDVFFTINKYAIRAAEQSKI 294

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +I   L  + +  +S+ G+ DA         N RL+  RA S  + +   G+S +RI  
Sbjct: 295 DEIVSFLKENPDATVSVTGYADA--GTGNNTINDRLAAQRAASVVKAIKDKGISANRIKS 352

Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338
            S  A  +    ++     N R+ I++
Sbjct: 353 DSKGARVQPFAENN----KN-RVSIMI 374


>gi|163733012|ref|ZP_02140456.1| OmpA domain protein [Roseobacter litoralis Och 149]
 gi|161393547|gb|EDQ17872.1| OmpA domain protein [Roseobacter litoralis Och 149]
          Length = 519

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +   ++   LA  I++  + +    + + V        +  S         F+ 
Sbjct: 362 DQAPEEVPITQQGDRLANAIAAAGAEIPLSELQRIVQRLGGMKRLTTSFR-------FEA 414

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+    ++   + ++   L               S  +  A  N  ++L RA S    +
Sbjct: 415 GSARLDAQSRSNVVQLAHDLEQGRFDARQMIFVGFSDGQGSAEANMEIALSRANSVADAV 474

Query: 300 MKSGVSEDRI---SKISGFAHHRLKIASDP--MNSANRRIDILVE 339
                + D +    ++  F         D      ANRR+++ V 
Sbjct: 475 RTKAETADLMQIDMQVDAFGEAMPLACDDSVWGRQANRRVEVWVR 519


>gi|109900220|ref|YP_663475.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109702501|gb|ABG42421.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 274

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 12/223 (5%)

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T         +T +K      +N++   ++                 G      ++ 
Sbjct: 19  APLTYAQTTPHAQTTKEKSAQSNTQNDLVGFASGALLGTAVGGPVGGVIGGIMGLFISND 78

Query: 164 EKSINKEENYFLPPLSKEK-------ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216
             + N           KE+             ++   D    ++++L             
Sbjct: 79  MNNDNALAQAQSGLRQKEQQLVALRLAQQRMYQQENPDNHTALTASLESHNVTAHHGTEQ 138

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275
             T +T    SI        F   S          L  I  ++  S +  I++ G+ D  
Sbjct: 139 QSTEQTTESHSITPIETNIQFRTGSHAVESHYHRQLDLIAALVRQSPDLQITLAGYADER 198

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                +  N  LS  RA S  + L K  V   ++     F   
Sbjct: 199 ---GSSHYNQALSQQRAISVKRYLTKQHVPGAQLHT-ESFGES 237


>gi|212694744|ref|ZP_03302872.1| hypothetical protein BACDOR_04276 [Bacteroides dorei DSM 17855]
 gi|237710983|ref|ZP_04541464.1| outer membrane protein 40 [Bacteroides sp. 9_1_42FAA]
 gi|265750572|ref|ZP_06086635.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
 gi|212662723|gb|EEB23297.1| hypothetical protein BACDOR_04276 [Bacteroides dorei DSM 17855]
 gi|229454827|gb|EEO60548.1| outer membrane protein 40 [Bacteroides sp. 9_1_42FAA]
 gi|263237468|gb|EEZ22918.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
          Length = 408

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 18/162 (11%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
            +  +  + +L +KI+   +  V   +V  V  E  +  +L        T  F       
Sbjct: 259 EVNDQAWVDELNRKINEERNKPVPAPVVTEVKKEVVKNEML------GMTVSFIIDKYNI 312

Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
                  + +  + L    E  + I G+ D          N +LS  RA +   +++K  
Sbjct: 313 TDIQKKNVAEAAKYLEDHPEVNLIITGYADVQ--TGNPAYNLKLSQRRAEAVCNMMVKEF 370

Query: 303 GVSEDRISKISGFAHH-RLK-IASDPMNSANRRIDILVEDRQ 342
           GV   RI ++       +   + ++       R+ + + + +
Sbjct: 371 GVDPSRI-RVDYKGDSLQPYQLKNEWN-----RVVVFITEAR 406


>gi|86136815|ref|ZP_01055393.1| OmpA domain protein [Roseobacter sp. MED193]
 gi|85826139|gb|EAQ46336.1| OmpA domain protein [Roseobacter sp. MED193]
          Length = 518

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   L+  I +    +  + + + V   T    +  S         F+ 
Sbjct: 361 DQAPERISMNAQGDRLSNAILAAGPEVKLEELQRLVKRLTGFRRLTTSFR-------FEA 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+ P  ++   ++++   L        +      S     A  N  ++L RA      +
Sbjct: 414 GSARPDAQSRSNIEQLARALETGLYDGKVLNFVGFSDGDGAASGNRAIALKRAQGVRDAV 473

Query: 300 MKSGVSED--RI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +  +    R+  ++  F         D       NRR+++ V+
Sbjct: 474 LATAEAGSVARVDVQVDAFGEALPMACDDSDWGRQVNRRVEVWVQ 518


>gi|161505468|ref|YP_001572580.1| hypothetical protein SARI_03626 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866815|gb|ABX23438.1| hypothetical protein SARI_03626 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 275

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 9/90 (10%)

Query: 236 MFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLD 290
           +F  +          +   L KI   +    +  SI   G+ D        + N +LS  
Sbjct: 156 LFRLNEYQLNMSDKNSQNNLDKIISFIRERGKYSSISVYGYADRQ---GTHQHNMKLSAL 212

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           RA    + L+  G  ED+I    G      
Sbjct: 213 RAEYVKKYLVSKGFPEDKIFA-KGMGEAVP 241


>gi|126662222|ref|ZP_01733221.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
           BAL38]
 gi|126625601|gb|EAZ96290.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
           BAL38]
          Length = 444

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD +   P   +   L  I   L    E  +  RG  D +      + N  L+  RA
Sbjct: 340 NIFFDTNKDTPNTASTNNLYYIINFLKKHPEAKVRARGFADTT---GDEKKNEELAQKRA 396

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRIDILV 338
            ++ + ++KSG+S DRI +I G         S        RR+   +
Sbjct: 397 MNSKEFIVKSGISADRI-EILGSGEDASMDTSSKTGRQLARRVSFEL 442


>gi|182436312|ref|YP_001824031.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178464828|dbj|BAG19348.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 219

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
             +   + + G TD       A     LS  RA + + VL K  +      +I G+    
Sbjct: 137 KQNATKVRVFGFTDNL---GSAAHGDVLSKQRADAVHGVLSKE-LGATITYEIRGYGEQY 192

Query: 320 LKIASDPMNSA--NRRIDI 336
              ++        NRR+++
Sbjct: 193 PIASNSNEEGRKKNRRVEV 211


>gi|312115743|ref|YP_004013339.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311220872|gb|ADP72240.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 789

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLSLDR 291
           F+  S    P+   +LQ I + +    +        I GHTDA        DN  LS  R
Sbjct: 661 FEFGSWEVRPDQAPLLQGIADSVNRIVQNNPGEVFLIEGHTDAV---GTDEDNLSLSDRR 717

Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS 324
           A +   VL +   V  + +    G+    L + +
Sbjct: 718 AQAVADVLTQYYQVPRENLVT-QGYGEQFLLVPT 750


>gi|327479120|gb|AEA82430.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
          Length = 187

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                V+++ GHTD          N ++ + RA    ++L   G+    + ++       
Sbjct: 110 RRDYPVVTVIGHTDTL---GHRAANEQVGMRRAQRMAELLRARGLEAMEL-RVESHGERN 165

Query: 320 LKI--ASDPMNSANRRIDILVE 339
           L +          NRR+++LV 
Sbjct: 166 LLVATPDATAEPRNRRVEVLVR 187


>gi|238023265|ref|ZP_04603691.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147]
 gi|237865648|gb|EEP66788.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147]
          Length = 176

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 8/114 (7%)

Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTD 273
                    I++            ++  LPE    L ++ E L      I    + GHTD
Sbjct: 41  VVAEPQVERINLSADALLRFNQSDAADMLPEGKATLDRLPENLVSCQAHIDGIALTGHTD 100

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
                   + N+ L L RA +    L   GV       ++     +    +   
Sbjct: 101 RL---GSEQYNYNLGLQRAQTVKNYLQGKGVQAP--ISVASAGESQPVTTACTG 149


>gi|153876506|ref|ZP_02003792.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152067030|gb|EDN66208.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 240

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 57/191 (29%), Gaps = 25/191 (13%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                 +  +K    +  +  +    ++   L      ++ +          +  +    
Sbjct: 36  QRSKNQIEHQKNAMAEIVEVAEHSRLRLHQELLQEFISDLKRWNADILEDNTVRFNSP-- 93

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE-------VLAHSTEVISIRGHTDASP-----FRN 279
               +F +  S+  P+   +L                  E I I GHT +          
Sbjct: 94  --QVLFHQGKSMLQPQFKNILDSFFPRYLAILLHYQEDIEAIRIEGHTSSDWLNADDIAT 151

Query: 280 IARDNWRLSLDRAYSAYQVL-MKSGVSED------RISKISGFAHHRLK--IASDPMNSA 330
              +N  LS  RA +  +   + + + E+      ++ + +G +  +             
Sbjct: 152 RYLNNVELSQQRALATLEYCYLLASLDENLRKWLPQVLRANGLSFAKPIFNADGSENAEQ 211

Query: 331 NRRIDILVEDR 341
           +RR++  V  +
Sbjct: 212 SRRVEFKVVTK 222


>gi|319762300|ref|YP_004126237.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
 gi|330825779|ref|YP_004389082.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|317116861|gb|ADU99349.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
 gi|329311151|gb|AEB85566.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 173

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 10/114 (8%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + +        F    +         L +  + +    +   + G  DA+     A  N 
Sbjct: 67  VVVEGGVVKFFFASGKADLAAGASEALAEAVKGVLEGGKTAVVSGFHDAT---GDAAVNA 123

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
            LS  RA +    L   GV E+++         + ++      N+  RR+++++
Sbjct: 124 ELSKQRALAVRDALKALGVPEEKVEL------KKPEVTQGSGSNAEARRVEVML 171


>gi|186682294|ref|YP_001865490.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186464746|gb|ACC80547.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102]
          Length = 594

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 16/142 (11%)

Query: 210 NIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---- 264
                 L E   + + +S I  ++    F + ++  +P  I  L  +   +         
Sbjct: 451 QFQDQKLVEIELSELRLSKIKIEKEIFFFTEGTTELMPGEIDKLPNLFLSIRKCLNIAKY 510

Query: 265 -----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH-- 317
                 I I GHT+++      R N  LS  RA      L+  G+  ++   ++  +   
Sbjct: 511 LGKNVQIQIIGHTNST---GTERRNRPLSQARANKILSYLISQGIKINQFQALTVSSSLT 567

Query: 318 HRLKIASDPMNSANRRIDILVE 339
            + ++ S+     NRR+   V 
Sbjct: 568 SQPELTSESKE-FNRRVSFKVL 588


>gi|256380952|ref|YP_003104612.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
 gi|255925255|gb|ACU40766.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
          Length = 407

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 12/118 (10%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            N  +F   S + +P     L++I            + GHT        A+    LS  R
Sbjct: 290 PNALLFQPDSDVLMPAASAALERIARRF-GPGTTARVTGHTAHR---GAAQGALALSERR 345

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASDP---MNSANRRIDILVEDR 341
           A      L+  GV  + ++ + G  +             P       NR + + +   
Sbjct: 346 ARRVAGALVSLGVPSEALTSVRGVGYAEPVRPEVDATGQPVPGAAEQNRAVVVELTGP 403


>gi|162454212|ref|YP_001616579.1| thrombospondin-like alanine-rich exported protein [Sorangium
           cellulosum 'So ce 56']
 gi|161164794|emb|CAN96099.1| thrombospondin-like alanine-rich exported protein [Sorangium
           cellulosum 'So ce 56']
          Length = 674

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 67/241 (27%), Gaps = 12/241 (4%)

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
           + + D    ++S        +        +       +    +        D++  +   
Sbjct: 417 NDAEDRDGFQDSDGCPDPDNDGDGILDARDTCPMGAEDVDGFKDDDGCPDPDNDIDQVPD 476

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
            S          + +       E+           D     + T+ G    +        
Sbjct: 477 ASDQCPLVAEDRDGFQDDDGCPERDNDEDGVADAADACPMTAETIDGTNDADGCPEPAGR 536

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASP 276
           +        ++       F  +S+   P     L  I +++      +++ +  + D   
Sbjct: 537 SLPRWSGDQVVLD-GLARFPAASARVPPALAAQLGMIAQLMRGRMPLDIVIVEAYADRQG 595

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            ++       L+  RA +  ++L  +G+  DRI+  +G           P       I++
Sbjct: 596 DQSARA--LELAGARASAVKELLATAGLPADRITAAAG----DPSAKRAPGAPQ---IEV 646

Query: 337 L 337
            
Sbjct: 647 T 647


>gi|319793210|ref|YP_004154850.1| v-type h(+)-translocating pyrophosphatase [Variovorax paradoxus
           EPS]
 gi|315595673|gb|ADU36739.1| V-type H(+)-translocating pyrophosphatase [Variovorax paradoxus
           EPS]
          Length = 839

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 9/104 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +SS   P     L  + + +  S   + + G+ DA      A  N  L+  RA +  
Sbjct: 745 FASASSEVAPNAKEALADVIKAV-QSGSTVLVSGYHDA---SGDAAKNAELAKQRAMAVS 800

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             L  +G  ED+I         + +    P  +  RR+++ V+ 
Sbjct: 801 DALKAAGAPEDKIELAK---PEQSQADGPPSEA--RRVEVKVKS 839


>gi|284038865|ref|YP_003388795.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283818158|gb|ADB39996.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 145

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 9/110 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD+SS +  P     L  + +VL      + ++ G+TD          N  L+  RA + 
Sbjct: 40  FDQSSPVLRPGVKTTLDSLAQVLVEQPALIATVTGYTD---LIGKRELNLALAEYRAKAV 96

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQ 342
              L + GV +DRI   +     + K  +      N   RR+ + +  R+
Sbjct: 97  GSYLAQRGVRKDRIIA-NWEGPDK-KATTTGSEGVNTIGRRVVVQLLPRE 144


>gi|189461675|ref|ZP_03010460.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
 gi|189431647|gb|EDV00632.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
          Length = 364

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 10/108 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
               F  +SS         ++K+ E + +  E   +I G+ D       A  N RLS  R
Sbjct: 263 ENVFFALNSSAIRSGEKQKIEKLAEFMKNHAECKVTICGYADKQ--TGNADINMRLSKKR 320

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
           A +    L + G+   RI  +       +     +       R+ I +
Sbjct: 321 AENVATQLKEMGIDSQRI-TVDYKGDTVQPFSTPEEN-----RVSICI 362


>gi|304411391|ref|ZP_07393005.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307305287|ref|ZP_07585035.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|304350246|gb|EFM14650.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306911590|gb|EFN42015.1| OmpA/MotB domain protein [Shewanella baltica BA175]
          Length = 276

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           + P  S   ++ L       + S+D  + ++      +    +    +            
Sbjct: 16  SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                 G  +   T      +  +   L    ++  L   +   L    +          
Sbjct: 76  LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQNAEK--RASE 133

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                + +    +    L+S +       F   SS      +  L  + EV+  S E  +
Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +R++    F       A   
Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249

Query: 327 MNSA--NRRIDILVE 339
             S   +RR+ + ++
Sbjct: 250 RESDVFDRRVTLTLQ 264


>gi|153000353|ref|YP_001366034.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
 gi|151364971|gb|ABS07971.1| OmpA/MotB domain protein [Shewanella baltica OS185]
          Length = 276

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           + P  S   ++ L       + S+D  + ++      +    +    +            
Sbjct: 16  SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                 G  +   T      +  +   L    ++  L   +   L    +          
Sbjct: 76  LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEK--RASE 133

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                + +    +    L+S +       F   SS      +  L  + EV+  S E  +
Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +R++    F       A   
Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249

Query: 327 MNSA--NRRIDILVE 339
             S   +RR+ + ++
Sbjct: 250 RESDVFDRRVTLTLQ 264


>gi|170728833|ref|YP_001762859.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169814180|gb|ACA88764.1| OmpA domain protein transmembrane region-containing protein
           [Shewanella woodyi ATCC 51908]
          Length = 341

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 5/114 (4%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286
           I       +F   SS         L ++  +   S     +  G +D       +  N +
Sbjct: 225 IEQSSVAVLFGFDSSSLSSTAKAKLDEVIRLSKQSDNDTILLNGQSDNQ---GDSEYNQK 281

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           LS  R       L  +GV    + + +          S    +  RR+ I +  
Sbjct: 282 LSEARVQQVADYLNANGVEVQTLEQQAT-GEQNAHANSRTDRALERRVIITLTS 334


>gi|163741431|ref|ZP_02148822.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis
           2.10]
 gi|161385165|gb|EDQ09543.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis
           2.10]
          Length = 624

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 65/222 (29%), Gaps = 12/222 (5%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
              S        +   +   +  +   +   +  +      TR    G  +    D +++
Sbjct: 384 QPGSNVTTYRFKDGSTRTVVVREDGAEVETIRARDGRVLRRTRTLTDGSSVVLFDDTQRA 443

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            N   +       ++   +       +      +     +     ++ +        ++ 
Sbjct: 444 DNVVVSELPTAAPRKSAFSSDTIDADELALVLAAKEAPAVSRRFSLRQIRNIDAVRRLVP 503

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIA 281
            I  Q     F+  S++        L  +G  L         EV  I GHTDA      A
Sbjct: 504 EITVQSIN--FETGSAVIRAAEAEELAALGNALRDMIAQNPQEVFLIEGHTDAV---GAA 558

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             N  LS  RA S    L +   V  + +  + G+    L +
Sbjct: 559 PFNLALSDRRAESVALALTEYFKVPPENMV-VQGYGETDLAV 599


>gi|146280852|ref|YP_001171005.1| outer membrane protein [Pseudomonas stutzeri A1501]
 gi|145569057|gb|ABP78163.1| outer membrane protein [Pseudomonas stutzeri A1501]
          Length = 179

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                V+++ GHTD          N ++ + RA    ++L   G+    + ++       
Sbjct: 102 RRDYPVVTVIGHTDTL---GHRAANEQVGMRRAQRMAELLRARGLEAMEL-RVESHGERN 157

Query: 320 LKI--ASDPMNSANRRIDILVE 339
           L +          NRR+++LV 
Sbjct: 158 LLVATPDATAEPRNRRVEVLVR 179


>gi|302530640|ref|ZP_07282982.1| predicted protein [Streptomyces sp. AA4]
 gi|302439535|gb|EFL11351.1| predicted protein [Streptomyces sp. AA4]
          Length = 251

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 57/219 (26%), Gaps = 1/219 (0%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           Q          L  +           R +       +       I +  +      +   
Sbjct: 34  QDDLAARARSALDAAGLRGGEVKFSGRQATLEGFPAEEAGRALGIVQGVDGVESAQASGG 93

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               +                    +         +       +          F+  ++
Sbjct: 94  AGPAQPAPSPSPEPSTAPPASPPPSSSAPPPAPPTDRDGIQAELDRRLAAAPITFEPDTA 153

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               +     + +  +L  + +    R     +          +LS +RA +  ++L++ 
Sbjct: 154 QLTDQGEQAARDLAPLLRDAPDNFRYRLVGRVADGPGGRSAALKLSRNRALTVIRLLIRE 213

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
            V  DR+  ++           +  +S +RR++I VE R
Sbjct: 214 DVPPDRLLAVASAGGSGTGADDNGGDS-DRRVEITVEQR 251


>gi|262066774|ref|ZP_06026386.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC
           33693]
 gi|291379577|gb|EFE87095.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC
           33693]
          Length = 232

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 26/173 (15%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               K+++ ++       + +S +  D   +G+  +       I I D+    +F+    
Sbjct: 46  QELRKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDLDPQTGTIKIDDK---ILFNTGEY 102

Query: 243 IPLPETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  PE    L +            E +      I I GHTD          N  LS  RA
Sbjct: 103 LLKPEGKKYLNEFVPIYINLLLNDEQVKKELSQIIIEGHTDDV---GSYIYNMELSQKRA 159

Query: 293 YSAYQVLMK-----SGVSEDRISKISGFAHHRLKI----ASDPMNSANRRIDI 336
           +   + +        G  E + S I+      +K+    + +     +RR++ 
Sbjct: 160 FEVIKYIYDEMPNFKGKEELK-SYITANGRSNIKVLRDESGNIDRDKSRRVEF 211


>gi|46251334|gb|AAS84615.1| outer membrane protein [Helicobacter pylori]
          Length = 147

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD             L +I +    +   + + G+TD       +  N  L + R  S  
Sbjct: 61  FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 117

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP 326
             L+  GV +D I  IS F   + K     
Sbjct: 118 NALVIKGVEKDMIKTIS-FGETKPKCTQKT 146


>gi|300773376|ref|ZP_07083245.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759547|gb|EFK56374.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 394

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            ++ L  L ++++     +  ++  + +      T   +  +I+       F   SS   
Sbjct: 243 DEEELNALRRRVNELAANNDALSKQLEEAGNKSMTNVIVNKNILAAPILVTFKIGSSEIS 302

Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
            ET V L    +V+    +     I G+ D       +  N RLS+ RA +   +L+   
Sbjct: 303 NETRVNLGFFAKVIKEGDQQVVYRITGYAD--KGTGTSEINQRLSMARAEAVKNILVNEF 360

Query: 303 GVSEDRISKISGFA 316
            V   +++ ++   
Sbjct: 361 AVPARQLATVAAGG 374


>gi|260909461|ref|ZP_05916166.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260636428|gb|EEX54413.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 174

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 24/173 (13%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           ++       +  L+ +   A     RL+++        +  + + +   V          
Sbjct: 24  ALKALSQAQMDALNAQLNDAASENARLKNMLANQQPAETKTIREFVTTPVSVFFNINKTN 83

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I                    + +V +Q + +    +   I++ G+ D+      A  N 
Sbjct: 84  I-----------------ASQKDLVNVQAVAKYAKENNSNINVVGYADS--ATGSANVNQ 124

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            LS  RA +    L+K GVS DRIS + G       +      S NRR  + +
Sbjct: 125 VLSDKRAETVANELVKMGVSRDRISTV-GKGG----VDDLSPISFNRRATVQI 172


>gi|288929630|ref|ZP_06423474.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329135|gb|EFC67722.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 404

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 30/176 (17%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           ++       +  L+ +   A     RL+++        +  + + +   V          
Sbjct: 254 ALKALSQAQMDALNAQLNDAASENARLKNMLANQQPAETKTIKEFVTTPVSVFFNINKTN 313

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I                    + +V +Q + +    +   I++ G+ D+         N 
Sbjct: 314 I-----------------ASQKDLVNVQAVAKYAKENNSNINVVGYADS--ATGSVNRNQ 354

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILV 338
            LS  RA      L+K G+S D+IS + G                 S NRR  + +
Sbjct: 355 YLSDKRAEMVANELVKMGISRDKISTV-GKGGVDDLSPI-------SFNRRATVQI 402


>gi|217973615|ref|YP_002358366.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
 gi|217498750|gb|ACK46943.1| OmpA/MotB domain protein [Shewanella baltica OS223]
          Length = 276

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 7/163 (4%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +++ ++++  +  +   K+ ++           + +    +    L+S +       F  
Sbjct: 106 QQRQISLQESQLSELSVKQQAAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRT 165

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            SS      +  L  + EV+  S E  + ++G+ D          N  LS  R       
Sbjct: 166 GSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR---GDVSYNQALSEQRLLEVRGY 222

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           L+K GV+ +R++    F       A     S   +RR+ + ++
Sbjct: 223 LIKQGVAAERMTT-QAFGALSPLQAEQDRESDVFDRRVTLTLQ 264


>gi|325522834|gb|EGD01304.1| peptidoglycan-associated lipoprotein [Burkholderia sp. TJI49]
          Length = 140

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E   +LQ+  + L    +  + I+G+TD       +  N  L   RA + 
Sbjct: 68  FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124

Query: 296 YQVLMKSGVSEDRISK 311
            + +   GV++ ++  
Sbjct: 125 RRAMSLLGVNDSQMEA 140


>gi|298384145|ref|ZP_06993706.1| outer membrane protein [Bacteroides sp. 1_1_14]
 gi|298263749|gb|EFI06612.1| outer membrane protein [Bacteroides sp. 1_1_14]
          Length = 363

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V     + V+ +     + + +   +    F  +S++   +    +  +   +    
Sbjct: 233 EPIVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQEDQQSKIDAMVAYMEKYP 292

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
              ++I G+ D        R N  LS  RA      L   G++ DRI  
Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339


>gi|319942877|ref|ZP_08017160.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599]
 gi|319743419|gb|EFV95823.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599]
          Length = 205

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 19/108 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ +S+    +    +  + E L  +     +  G+ D +        N  L+  RA   
Sbjct: 109 FESASATLPADAQKAIATVVEALKAAEGRRVLLAGYHDPT---GNIDFNRDLAKRRALGV 165

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDILV 338
              L+  G+   RI      + +G         ++      RR++IL+
Sbjct: 166 RDALIAQGIPAQRIILRKPEQTTGSG-------NNAEA---RRVEILL 203


>gi|304395571|ref|ZP_07377454.1| OmpA/MotB domain protein [Pantoea sp. aB]
 gi|304356865|gb|EFM21229.1| OmpA/MotB domain protein [Pantoea sp. aB]
          Length = 235

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 49/182 (26%), Gaps = 27/182 (14%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
              K K +A+  ++  Q L   +    S    D        +     +     D     +
Sbjct: 47  EKEKIKEVAVAYEQAQQQLYNALEIEFSK---DLPSWDAEIDKQTLEVRFKSPD----VL 99

Query: 237 FDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNI-----ARDN 284
           F   SS   P+   +L           +        + I GHT               +N
Sbjct: 100 FGLGSSELKPKFKEILNDFFPRYLRVLDQYKQHITEVRIEGHTSTDWTGAANQDVAYFNN 159

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRI------SKISGFAHHRLKIASDPMNSAN--RRIDI 336
             LS  R  +  Q +     SE             G++     + +      N  RR+  
Sbjct: 160 MELSQGRTRAVLQYVYSLKESETHQKWVKSKFAAVGYSSSHPILDAAEKEDPNRSRRVTF 219

Query: 337 LV 338
            V
Sbjct: 220 KV 221


>gi|303236743|ref|ZP_07323322.1| OmpA family protein [Prevotella disiens FB035-09AN]
 gi|302482911|gb|EFL45927.1| OmpA family protein [Prevotella disiens FB035-09AN]
          Length = 381

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 11/162 (6%)

Query: 182 KILAMKRKKRLQDLAKKI--SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +  + +  L  L  ++  +   +  + D +      ET    +   +I    +  F+ 
Sbjct: 228 DAINAQHQAALDALNARLRDAEAENARLRDALANQKPTETVSQSVK-ELITTPISVFFNI 286

Query: 240 SSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +     + +V +Q + +    +   + + G+ D+      A+ N  LS  RA +    
Sbjct: 287 DKTNIASKKDLVNVQALAKYAIDNNNNLLVTGYADS--ATGSAKHNQWLSEQRAKTVAGE 344

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           L+K GVS D+I+++ G       + +    S NRR  + V D
Sbjct: 345 LVKMGVSSDKITEV-GKGG----VDTLSPISFNRRATVQVTD 381


>gi|288942645|ref|YP_003444885.1| hypothetical protein Alvin_2951 [Allochromatium vinosum DSM 180]
 gi|288898017|gb|ADC63853.1| conserved hypothetical protein [Allochromatium vinosum DSM 180]
          Length = 243

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 32/174 (18%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             +  + I + L     D++ +            +++  +    +FD++S+   PE   +
Sbjct: 63  AAESRQAIYTALEREFRDDLPRW---NAELVERTLTLRFREPDILFDRNSARIKPEFEAI 119

Query: 252 LQKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVL 299
           L           E        I + GHT +              N  LS  R  +  +  
Sbjct: 120 LSDFLPRYVARLEPFRDVIREIRLEGHTSSEWNAGTAPLDAYFLNMELSQQRIQAVLRF- 178

Query: 300 MKSGVS--------EDRISKISGFAHHRLKIASDPMNSAN----RRIDILVEDR 341
              G+           R++ + G +  R     D     N    RR++  V   
Sbjct: 179 -AYGLDRLKGEDWFRGRVAAV-GLSSSRPV--QDAQGRENPTASRRVEFSVLTD 228


>gi|32265616|ref|NP_859648.1| hypothetical protein HH0117 [Helicobacter hepaticus ATCC 51449]
 gi|32261664|gb|AAP76714.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 238

 Score = 55.7 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 56/195 (28%), Gaps = 24/195 (12%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
           I ++    L   +++ +   +    +      +   L   +     K +     +     
Sbjct: 30  ITQKTQEDLKIHNQKLLELNQAMSEIAKNYSNLQQELYEALLKEFSKDLKRWDAQIDEDN 89

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV---------LAHSTEVISIRGHTDASPF 277
           +I       +FD  ++        +L                  + E + I GHT  S +
Sbjct: 90  TIRFNEPEVLFDTGAAQVKKRFQDILNDFFPRYVKILSLPKFQDNIEEVRIEGHTSQSWY 149

Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMKSGVSED------RISKISGFAHHRLKIASDP 326
                      N  LS  RA    +         +      ++ + +G +  +     D 
Sbjct: 150 VAHTLEERYLGNAELSQARALEVLKYCFNLKSINNYKEWLIKVFRANGLSFAKPLEDDD- 208

Query: 327 MNSANRRIDILVEDR 341
               +RR++  V  +
Sbjct: 209 ---KSRRVEFRVVTK 220


>gi|269102040|ref|ZP_06154737.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161938|gb|EEZ40434.1| outer membrane protein A precursor [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 339

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +         L ++   +  + EV   I G TDA         N ++S  RA    + 
Sbjct: 241 GQTKLNDYGRYNLNEVVATMNANPEVTAQIVGRTDAV---GSKAINEKVSNARAQGVAEY 297

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339
           L  +G+   R+  +S  A++   +A +   + N   R + I+++
Sbjct: 298 LEANGIDASRL-TVSSVANNDPLVAGNSNGA-NLIERSVQIILK 339


>gi|167950567|ref|ZP_02537641.1| Cobyrinic acid ac-diamide synthase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 202

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
              ++ + GV   R++ I GF  +     +        NRR+ +++
Sbjct: 1   MVDLISRLGVEPKRLAAI-GFGEYHPIADNTSEAGRQKNRRVTLVI 45


>gi|255535771|ref|YP_003096142.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
 gi|255341967|gb|ACU08080.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
          Length = 427

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             +   F+ +S+   PE+   L  I  +LA   +  I I  ++D    +     N  LS 
Sbjct: 322 NFDNLSFEFNSTKLTPESQTQLDNIKAILAAYPDAKIKIGAYSDK---KGDDAANKTLSR 378

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANR 332
            RA +    L     +  ++    G+   R  +   ASD     +R
Sbjct: 379 QRADAVKSAL-----ASAQVISAEGYGEERATVAETASDEEREKDR 419


>gi|160874991|ref|YP_001554307.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
 gi|160860513|gb|ABX49047.1| OmpA/MotB domain protein [Shewanella baltica OS195]
 gi|315267223|gb|ADT94076.1| OmpA/MotB domain protein [Shewanella baltica OS678]
          Length = 276

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           + P  S   ++ L       + S+D  + ++      +    +    +            
Sbjct: 16  SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                 G  +   T      +  +   L    ++  L   +   L    +          
Sbjct: 76  LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQAAEK--RASE 133

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                + +    +    L+S +       F   SS      +  L  + EV+  S E  +
Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+K GV+ +R++    F       A   
Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249

Query: 327 MNSA--NRRIDILVE 339
             S   +RR+ + ++
Sbjct: 250 RESDVFDRRVTLTLQ 264


>gi|294669045|ref|ZP_06734131.1| putative cytochrome c oxidase, subunit II [Neisseria elongata
           subsp. glycolytica ATCC 29315]
 gi|291309037|gb|EFE50280.1| putative cytochrome c oxidase, subunit II [Neisseria elongata
           subsp. glycolytica ATCC 29315]
          Length = 241

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +  ++E +  Y   +             + +  +    TDLE       +  L  + +  
Sbjct: 38  ETGKIEGSPTYGQAAASEVAASAVSQAAASESNEPAVITDLETGETGTADGSLFIIQEAP 97

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L ++         K +S  +   VA N          +    I   +      F    +
Sbjct: 98  PLEVELAPSESVGDKGLSVPVDESVAQNPG---SANEAQDEARIVTANGAVKFYFATGKA 154

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
              P     L+ +    A   + I + G+ D++     A+ N  LS  RA++   VL+  
Sbjct: 155 DVAPGAQEALKDVLVA-ALGGKKIVVSGYHDST---GNAQVNEELSKQRAFAVRTVLLGF 210

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           GV + +I         +         +  RR+++ VE
Sbjct: 211 GVPDKQIEL------RKPSDTEAGSGAEARRVEVFVE 241


>gi|94500304|ref|ZP_01306837.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
 gi|94427603|gb|EAT12580.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
          Length = 242

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 34  KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
            + YAD MT+L A F+V++  +  + +    + +       +  +        +   E  
Sbjct: 1   MVSYADLMTLLFALFVVLYAASNINSEKFYEMRRALE-VRFSETSNVPVSEAVRQFLEAP 59

Query: 94  SQNKIDLSIDEHITKNSVDLK 114
           S   ++ ++D     +++  +
Sbjct: 60  SVEGLNQALDPEKESSTLPQR 80



 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 66/214 (30%), Gaps = 19/214 (8%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + S  +      + R  E       +  + +++ +           + +   K    L  
Sbjct: 20  AASNINSEKFYEMRRALEVRFSETSNVPVSEAVRQFLEAPSVEGLNQALDPEKESSTLPQ 79

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI------PLPET 248
              +IS   + L  +         T    I I +       +F   +           E 
Sbjct: 80  RLLQISDISAALPENEY----TLSTMDQWISIEV---PMGKLFRWDNRQNRYGSRITQEG 132

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
              + ++  V A   E I+I   +  +       + W+    +  +  Q L   G+   R
Sbjct: 133 AKTMVELVNVFAEGDEAINIEVFSADTL---DDDNPWQHGAMQGAAIVQYLQLEGLQPSR 189

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +  +S +  ++    +D       N R++ +++ 
Sbjct: 190 L-AVSNYGPYQPIATNDDEQGRQLNARVNFMIDR 222


>gi|281421739|ref|ZP_06252738.1| outer membrane protein [Prevotella copri DSM 18205]
 gi|281404234|gb|EFB34914.1| outer membrane protein [Prevotella copri DSM 18205]
          Length = 381

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 9/151 (5%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K     AK +                  E     +   + + R    F  +S    P   
Sbjct: 236 KSYTKKAKPVEEPAPAPAPKQEYVAPKPEPKPAPVEKKVEEIRRDIFFTINSYKIAPAED 295

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
             ++ + + L  + E  + + G+ D          N R++  RA +   +L K   +  +
Sbjct: 296 AKIRGVVDFLNKNPEAKVVVTGYAD--KGTGNDVINDRIAAKRAAAVVWMLTKKYNIPSE 353

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RI++ S  A  +    +    + N R+ I++
Sbjct: 354 RITEESKGARVQPFAEN----AEN-RVTIMI 379


>gi|257140362|ref|ZP_05588624.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis E264]
          Length = 507

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 467

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503


>gi|167617777|ref|ZP_02386408.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis Bt4]
          Length = 517

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 477

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513


>gi|83718717|ref|YP_440984.1| cytochrome c oxidase subunit II [Burkholderia thailandensis E264]
 gi|83652542|gb|ABC36605.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis E264]
          Length = 525

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA   
Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 485

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521


>gi|126736197|ref|ZP_01751940.1| OmpA domain protein [Roseobacter sp. CCS2]
 gi|126714363|gb|EBA11231.1| OmpA domain protein [Roseobacter sp. CCS2]
          Length = 564

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 13/112 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293
           F     +   +    L ++ E ++            G  D+         N +LS DRA 
Sbjct: 457 FPTDVFVLDSKGQRDLDRLVEFMSRPENANRELIFVGFADSV---GQYVYNTQLSRDRAQ 513

Query: 294 SAYQVLMKS---G-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
              Q +      G +   R+S + G +       +D     S NRR+++ V 
Sbjct: 514 QVLQQVRNHPNAGPLRSTRMSTV-GLSEAAPVSCNDDAYGRSRNRRVEVWVR 564


>gi|258649209|ref|ZP_05736678.1| putative immunoreactive antigen PG33 [Prevotella tannerae ATCC
           51259]
 gi|260850474|gb|EEX70343.1| putative immunoreactive antigen PG33 [Prevotella tannerae ATCC
           51259]
          Length = 389

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQ 231
               +           ++    +++ L     +N     +    +    I       +  
Sbjct: 226 TDWDQVPDVDALMAMNKEQMDALNAALKDQQDENARLREMLANQKPAETIEKVTTEYVVT 285

Query: 232 RNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  F+ +SS     + +V ++++ E    +   I + G+ D+      A  N RLS  
Sbjct: 286 TTSVFFNLNSSKIASRKDLVNVKEVAEYAKANNTKIRVTGYADSK--TGSASINRRLSEA 343

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RA +    L+K GVS D I   +        + +    S NRR  + +
Sbjct: 344 RAAAVANELVKMGVSRDNIITEAKGG-----VDTLSPFSYNRRATVKI 386


>gi|237510234|ref|ZP_04522949.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|235002439|gb|EEP51863.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
          Length = 230

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 27/172 (15%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K  +   + +   L    A ++ +          + I   D   T +F   SS   P   
Sbjct: 45  KEYETTKRDMQLALQKEFAKDLKQW--NAEILGDMTIRFNDP--TVLFATGSSELRPRFK 100

Query: 250 VVLQKIG---------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSA 295
            VL +                + + I I GHT A              N  LS  R  SA
Sbjct: 101 QVLGQFFPRYVALLTSAQYKDAVKEIRIEGHTSALWTGTTDEKIAYFRNMELSQARTRSA 160

Query: 296 YQVLMKS-GVSED-----RISKISGFAHHRLKIASDPMNS---ANRRIDILV 338
            + L+    V  +     +    +G +  R        ++   AN+R++  +
Sbjct: 161 LEYLLSLPAVQGNEKWLVQHVTANGLSSSRPLAQDSQSSASQIANQRVEFRI 212


>gi|253569743|ref|ZP_04847152.1| outer membrane protein [Bacteroides sp. 1_1_6]
 gi|251840124|gb|EES68206.1| outer membrane protein [Bacteroides sp. 1_1_6]
          Length = 363

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V     + V+ +     + + +   +    F  +S++   +    +  +   +    
Sbjct: 233 EPVVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQKDQQSKIDAMVAYMEKYP 292

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
              ++I G+ D        R N  LS  RA      L   G++ DRI  
Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339


>gi|332826497|gb|EGJ99326.1| hypothetical protein HMPREF9455_00359 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 619

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 27/123 (21%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S+ LP  I  L+        H+ E + I G+ D          N+ LS  RA 
Sbjct: 498 VYFDFDKSVLLPSAIQELKMWLAETDLHNIESLIIDGYADEM---GTEDYNYDLSRRRAE 554

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------SAN--------------RR 333
              Q L + G+     ++++G        +  P+       + N              RR
Sbjct: 555 VVAQWLSQQGIKAR--ARVTGKGKIF-VNSDSPLEVPFYNDNRNTSIWNHKIWMNRKARR 611

Query: 334 IDI 336
           +DI
Sbjct: 612 VDI 614


>gi|146342461|ref|YP_001207509.1| hypothetical protein BRADO5620 [Bradyrhizobium sp. ORS278]
 gi|146195267|emb|CAL79292.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278]
          Length = 222

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 8/186 (4%)

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
            L  ++    S               ++   +    +   A K  +     +        
Sbjct: 10  WLIAASLPLASAPARAQEVTREDIVRQLSRFEAAPTIDLPALKQQTQERSKMRGRNEPPP 69

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHT 272
                    L S+        FD  + I  PE+   + +I + + +         I GH 
Sbjct: 70  SKRPPIAPELTSLPTFNVDIQFDVDTPIVRPESYQTVGRIADAMVYADLLPYTFLIVGHI 129

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331
           +A         N  LS  RA +   +L  +  +S  R+  + G    +L   S P    N
Sbjct: 130 EA---NGKRESNVILSQRRADAIRDILANTFKISVKRLQSV-GLGEEQLLDPSKPTAPIN 185

Query: 332 RRIDIL 337
           ++I I+
Sbjct: 186 QQIQII 191


>gi|517110|dbj|BAA06035.1| outermembrane P6 protein homologue [Haemophilus parainfluenzae]
          Length = 91

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 4/83 (4%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
           +  + NT  F         E + +L      L  +    + + G+TD          N  
Sbjct: 10  LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 66

Query: 287 LSLDRAYSAYQVLMKSGVSEDRI 309
           L   RA +    L   GV   ++
Sbjct: 67  LGQRRADAVKGFLTGKGVDAGKL 89


>gi|262198940|ref|YP_003270149.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
 gi|262082287|gb|ACY18256.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
          Length = 570

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 22/243 (9%)

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
           +  +    +  +   G  ++     R  +      ++      +  L RD     D    
Sbjct: 335 ADADDACPDEAEDPDGFEDEDGCPDRDNDGDGTPDDTDACPTQQGPLKRDGCPVPDGDGD 394

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
              ++         +   +          +   D      +           + V     
Sbjct: 395 GIDDERDACPAIAGVESGAGCPDGDGDSVRDRLDNCPN-EAGERDYYGCQTAQRVALSED 453

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279
              +   +        F          ++ VL ++  VL    E  + I  H        
Sbjct: 454 SVLLAAPVP-------FRGG--ALRERSLPVLDELAAVLTAHPELRVRIEVHVAERR--- 501

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR----RID 335
            A  N RLS  RA +    L++ G+ E+R+ + +G     L+   D   +A R    R+D
Sbjct: 502 DAAANQRLSEQRAAAVRAYLLRRGLDEERV-EGAGMGESALR--GDTEAAA-RGDKARVD 557

Query: 336 ILV 338
           + +
Sbjct: 558 VRI 560


>gi|320324886|gb|EFW80958.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 240

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 9/203 (4%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               + + + S D +    +        ++ I    +  ++E   + L   ++       
Sbjct: 26  QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218
           S+   +   +  N  L      K+   +++ +L     K++S        ++ +  +   
Sbjct: 86  SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+TD++  
Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199

Query: 278 RNIARDNWRLSLDRAYSAYQVLM 300
               ++N +LS DRA +   VLM
Sbjct: 200 -GDRQENLKLSKDRAQAVADVLM 221


>gi|238023262|ref|ZP_04603688.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147]
 gi|237865645|gb|EEP66785.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147]
          Length = 178

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 21/132 (15%)

Query: 225 LISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVL---AHSTEVISIRGHTDASPFR 278
            +  I+     +F  + S      P+    L  +   L       + I++ GHTD     
Sbjct: 46  QVERINLAADALFQFNRSSVKDLLPQGRATLDDLAARLVSRQAHIDSIALVGHTDRL--- 102

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----DPMNSA--- 330
              + N+ L L RA +    L + GV +            +                   
Sbjct: 103 GSEQYNYNLGLKRAETVKAYLQEKGVQDP--ISTRSAGETQPVTTDCHGTRATAALKACL 160

Query: 331 --NRRIDILVED 340
             +RR+ + +  
Sbjct: 161 QPDRRVVVEITG 172


>gi|42527170|ref|NP_972268.1| OmpA family protein [Treponema denticola ATCC 35405]
 gi|41817594|gb|AAS12179.1| OmpA family protein [Treponema denticola ATCC 35405]
          Length = 167

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 4/146 (2%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   K+     +        + V  ET +     ++ D   T  F   S      T  +L
Sbjct: 20  KSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQIDQFTAQIL 79

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++IGE L        +     A        D   L   RA +      K  + +     +
Sbjct: 80  KEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIAL--QRAIAVASYFQKMKLFDANNIIV 137

Query: 313 SGFAHHRLKIASD--PMNSANRRIDI 336
            G        +         NRR++I
Sbjct: 138 EGKGASEPARSHSEITDRFKNRRVEI 163


>gi|126734277|ref|ZP_01750024.1| OmpA/MotB [Roseobacter sp. CCS2]
 gi|126717143|gb|EBA14007.1| OmpA/MotB [Roseobacter sp. CCS2]
          Length = 527

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 15/163 (9%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                + RL+D+   +  T +     +  +             S      +  F+  SS+
Sbjct: 364 DRELERMRLEDMGMMLVHTAAVEPDFDGAQYSDMMQQLR----SADRLSTSFRFNTGSSV 419

Query: 244 PLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
              E+I  ++++   +         + + G  D+         N  L+ +RA +   VL 
Sbjct: 420 LDVESIRNIEELAARMEAGEFDGLEVLLVGFADSV---GERARNTALAQNRADAVRNVLA 476

Query: 301 K--SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339
              S  +  R+  IS +        ++       NRR+++ + 
Sbjct: 477 DTLSRENAQRLRPIS-YGELLPLSCNEDEVGRERNRRVEVWLR 518


>gi|29347852|ref|NP_811355.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572429|ref|ZP_04849831.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298387858|ref|ZP_06997408.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|29339754|gb|AAO77549.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251837844|gb|EES65933.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|298259463|gb|EFI02337.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 364

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 12/140 (8%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
               +V +      + E  +    + +   +    F  +S+    +    +  + E L +
Sbjct: 232 EAEPVVVEQPKPVPVVEQPQPKKEVVVQPMKQDIFFALNSAKIQDDQKSKIDMLVEYLQN 291

Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-R 319
           +    + + G+ D        + N  LS  RA +    L   G++ DRI  +       +
Sbjct: 292 NPAAKVKVTGYAD--VNTGNPKINKSLSEKRAGNVADALKAKGITTDRIM-VDSKGDTVQ 348

Query: 320 L-KIASDPMNSANRRIDILV 338
             K   +       R+ I +
Sbjct: 349 PYKAPEE------NRVSICI 362


>gi|332884964|gb|EGK05217.1| hypothetical protein HMPREF9456_02887 [Dysgonomonas mossii DSM
           22836]
          Length = 389

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 5/129 (3%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           ++ +   + L+    +     V+ +     + +S     N  +F  +         V + 
Sbjct: 248 NMQRADMARLAQRPVEQAEPTVVVKEVIREVQVSEEPVNNVVLFGINKVKVESHQEVNVY 307

Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
            + + L  + +    + G+TD       A  N +LS  RA +   V+  K G+++DR+  
Sbjct: 308 NVAKYLKENPDKKVRVIGYTDKE--TGTAVINEKLSRQRAQNVADVITGKYGINQDRVI- 364

Query: 312 ISGFAHHRL 320
           +        
Sbjct: 365 VEWEGQTNP 373


>gi|221211146|ref|ZP_03584125.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD1]
 gi|221168507|gb|EEE00975.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD1]
          Length = 532

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSALPADAKAAIAAAADYANAHPDAKLTLSGFTDKT---GSADANAELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 528


>gi|254462635|ref|ZP_05076051.1| OmpA/MotB [Rhodobacterales bacterium HTCC2083]
 gi|206679224|gb|EDZ43711.1| OmpA/MotB [Rhodobacteraceae bacterium HTCC2083]
          Length = 517

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 7/173 (4%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
             P        A    +  ++L+              +   +     +  + +    +R 
Sbjct: 345 RSPSAQIVIRRAGFVDQAPEELSINKQGDRFANAISLLGTEINLTEVKRLVKVLSPMKRL 404

Query: 234 TPMFDK--SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  F     SS    +++  +Q++   +               S  +  A  N  ++L R
Sbjct: 405 STSFRFRAGSSALDAQSLSNVQQLARAIETGVYDERSVTFVGFSDGQGPADGNKTIALRR 464

Query: 292 AYSAYQVLMKSG--VSEDRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           A S    + K+   V    +   +  F         D       NRR++I V 
Sbjct: 465 ANSVLAAVKKAAETVDLSELNISVEAFGEALPMACDDSAWGRQVNRRVEIWVR 517


>gi|198275751|ref|ZP_03208282.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135]
 gi|198271380|gb|EDY95650.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135]
          Length = 358

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 4/145 (2%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
            + +       + E  L   + K + +    +   ++ L  +   + V+           
Sbjct: 189 EQFKGASKNISAAEMELVQSQLKSMHEENANLRKQVNTLEEEKNNRPVVTAAAPENENRL 248

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286
                    FD + +    +  V L+    ++         I G+ D       A  N R
Sbjct: 249 ADAVEYVAFFDINKAYLSDKEAVNLEAYANLIKKYPENKFVITGYADKQ--TGTAEFNER 306

Query: 287 LSLDRAYSAYQVLM-KSGVSEDRIS 310
           LS  RA + Y  L+ K GV +++++
Sbjct: 307 LSKLRAEAVYNTLVDKYGVDKNQLT 331


>gi|83815059|ref|YP_446342.1| OmpA domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83756453|gb|ABC44566.1| OmpA domain protein, putative [Salinibacter ruber DSM 13855]
          Length = 208

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 8/126 (6%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265
             N+ + V           +    +    F   S+         L +    +        
Sbjct: 66  NQNLTRQVQALRDSLRAREAGTTLQPPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAG 125

Query: 266 ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRL 320
             I+G+TD  P           NW LS  RA +    L     +    + +I  F    +
Sbjct: 126 FRIQGYTDPVPIGPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASL-EIEAFGPRTM 184

Query: 321 KIASDP 326
               + 
Sbjct: 185 VGPDET 190


>gi|304393352|ref|ZP_07375280.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
 gi|303294359|gb|EFL88731.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
          Length = 174

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
           +   F   S+    +    L K    L+       +  GH D          N  L   R
Sbjct: 65  DRVFFTTDSTSLTGDARATLDKQATWLSRYGNYSIVVEGHADER---GTREYNLALGARR 121

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333
           A +    L+  GV+  RI  IS F   R     +D    S NRR
Sbjct: 122 AAATRDYLVARGVNRGRIRTIS-FGKERPVAVCNDISCFSQNRR 164


>gi|221199935|ref|ZP_03572978.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2M]
 gi|221207396|ref|ZP_03580405.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2]
 gi|221172599|gb|EEE05037.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2]
 gi|221180174|gb|EEE12578.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2M]
          Length = 524

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 428 FETGKSALPADAKAAIAAAADYANAHPDAKLTLSGFTDKT---GSADANAELAKHRAQAV 484

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 485 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 520


>gi|29349889|ref|NP_813392.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|29341800|gb|AAO79586.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
          Length = 363

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
             +V     + V+ +     + + +   +    F  +S++   +    +  +   +    
Sbjct: 233 EPIVEQPKPQPVVKQPEPESVAVVVEPMKQNIFFALNSALLQKDQQSKIDAMVAYMEKYP 292

Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
              ++I G+ D        R N  LS  RA      L   G++ DRI  
Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339


>gi|226944060|ref|YP_002799133.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
           DJ]
 gi|226718987|gb|ACO78158.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
           DJ]
          Length = 215

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 11/155 (7%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
             ++    ++   + +           E     ++++         F+      L    +
Sbjct: 43  ESRESRAWVADHEASVREAVKGSQFEVERRGDLLVVT---APVDSSFNPDRPSMLLVATL 99

Query: 251 VLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
                   LA     +++   GH D+      A    RLS +RA S   +   SG+  DR
Sbjct: 100 GPLSRVAKLAAQDREVAVLLLGHGDS---SGSAELTNRLSQERAQSMAAIFRMSGLHHDR 156

Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +    G      + ++   +    NRR+++ +  R
Sbjct: 157 LM-YKGMGSDVPRSSNANKDGRSLNRRVEMYLTTR 190


>gi|229495776|ref|ZP_04389504.1| outer membrane protein 40 [Porphyromonas endodontalis ATCC 35406]
 gi|229317350|gb|EEN83255.1| outer membrane protein 40 [Porphyromonas endodontalis ATCC 35406]
          Length = 296

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           N   F  +S+       + +         +   I I G+ D          N  LS  RA
Sbjct: 195 NVVYFRIASAKIDQNQYINIYNTARYALENNSKIYIVGYADE--ATGNPSINMTLSERRA 252

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHH-RLKIASDPMNSANRRIDIL 337
            +  + L++  GVSED + ++       +    ++       R+ I+
Sbjct: 253 KAVAKALVEKYGVSED-MIEVDFKGDTVQPYETNEWN-----RVVIM 293


>gi|323344217|ref|ZP_08084443.1| hypothetical protein HMPREF0663_10979 [Prevotella oralis ATCC
           33269]
 gi|323094946|gb|EFZ37521.1| hypothetical protein HMPREF0663_10979 [Prevotella oralis ATCC
           33269]
          Length = 406

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
            +F +  S+  P     ++ I   + +  +  + I+G+            N RLS +RA 
Sbjct: 302 VLFRQGKSVIDPAQYAPIELIAHYMRNHKDAKVEIKGYASPE---GSKEINQRLSEERAQ 358

Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHR 319
           +    L+K   ++  R++   G     
Sbjct: 359 AVKNALVKKYKIAASRLTT-KGMGATD 384


>gi|323343299|ref|ZP_08083526.1| major outer membrane protein OmpA family protein [Prevotella oralis
           ATCC 33269]
 gi|323095118|gb|EFZ37692.1| major outer membrane protein OmpA family protein [Prevotella oralis
           ATCC 33269]
          Length = 381

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 16/162 (9%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             +    + ++  L  +++   +       +        +   +   +    +  F+ + 
Sbjct: 229 DAIKALSQAQIDALNAQLNDANAENARLKELLANQKPVEQPAAVKEFVTTPVSVFFNLNK 288

Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     + +V +Q + +        + + G+ D+         N  LS +RA +    L+
Sbjct: 289 TNIASQKDLVNVQALAKYAKQKNSKVLVNGYADS--ATGKPAHNQWLSEERAKTVANELV 346

Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337
           K G+S D I+   G                 S NRR  +++ 
Sbjct: 347 KLGISRDNITT-KGNGGVDELSPI-------SFNRRATVEVT 380


>gi|300114482|ref|YP_003761057.1| chemotaxis protein MotB-like protein [Nitrosococcus watsonii C-113]
 gi|299540419|gb|ADJ28736.1| chemotaxis protein MotB-related protein [Nitrosococcus watsonii
           C-113]
          Length = 250

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 36/199 (18%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L++ +    +   +L++  +     L  +  +   + +         ++ I +  +T  
Sbjct: 43  ELTQTQKKIEQDIDQLKNAEQARRDILHEIRDELAKRNIKILIADNDTVLRIPE--STLA 100

Query: 237 FDKSSSIPLPETI-------------------VVLQKIGEVLAHSTEVISIRGHTDASPF 277
           F  +S     +                            +      + + I GHTD+ P 
Sbjct: 101 FASNSYALPADEKVRSSVVAIGQVLHAAINRSFKPGVSEKRRFDYLDTVFIEGHTDSRPT 160

Query: 278 RNIARDNWRLSLDRAYSAYQVLMK-SGVSE----------DRISKISGFAHHRLKIASD- 325
           +   + NW LS  RA S ++       VS           D++  +SG+A  R    ++ 
Sbjct: 161 K-RIKGNWGLSTFRAISLWEYWDDVLDVSPVLTDMSNAFGDKLFSVSGYAATRRVNEAEI 219

Query: 326 --PMNSANRRIDILVEDRQ 342
                  NRRIDI    ++
Sbjct: 220 TREDRRENRRIDIRFTVKR 238


>gi|312962647|ref|ZP_07777136.1| hypothetical protein PFWH6_4568 [Pseudomonas fluorescens WH6]
 gi|311283022|gb|EFQ61614.1| hypothetical protein PFWH6_4568 [Pseudomonas fluorescens WH6]
          Length = 437

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 25/126 (19%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-------SIRGHTDASPFRNIARDNWRL 287
            +F+ + + P       + +    L    +         SI G+ D  P +     N  L
Sbjct: 311 SLFESNGAEPTALGKRKINEFRRQLRAFAKTSGLSVVEASITGYADRQPLKAKGDTNLEL 370

Query: 288 SLDRAYSAYQVL--------------MKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           S  RA S  Q L              +  GV++ R    +G A            S++RR
Sbjct: 371 SRRRALSVSQYLGSILVPLSEDNKSIVGRGVAQTRAECPAGLAP----ADMSSCLSSDRR 426

Query: 334 IDILVE 339
           ++++VE
Sbjct: 427 VEVVVE 432


>gi|134297038|ref|YP_001120773.1| cytochrome c oxidase subunit II [Burkholderia vietnamiensis G4]
 gi|134140195|gb|ABO55938.1| cytochrome c oxidase, subunit II [Burkholderia vietnamiensis G4]
          Length = 528

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 19/110 (17%)

Query: 233 NTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           +T  F+   S +P      +        AH    +++ G TD       A  N  L+  R
Sbjct: 428 STVYFETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKRR 484

Query: 292 AYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           A +    L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 485 AQAVRDALKAAGVAEDHIVLKKPETITGGADAK--------EA--RRVEI 524


>gi|296127841|ref|YP_003635093.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
 gi|296019657|gb|ADG72894.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
          Length = 371

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 15/117 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR---DNWRLSLDRA 292
           F   S       +  ++++   L  +      + GH+D  PF N       N  LS  RA
Sbjct: 37  FRLGSYGFDRFNLEKVKQVAMFLQANPNTYLIVEGHSDYRPFYNETPNGTSNVMLSYYRA 96

Query: 293 YSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNS------ANRRIDILVEDRQ 342
            +  Q + + G + +DR+  + G+ +   K               NRR++ +V + +
Sbjct: 97  LAFSQQINEYGANLKDRLIPL-GYGYTNPKY---TERDDYYDHTKNRRLEFIVVESK 149


>gi|134095750|ref|YP_001100825.1| putative OmpA family protein [Herminiimonas arsenicoxydans]
 gi|133739653|emb|CAL62704.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
          Length = 225

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 17/116 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIG-EVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAY 293
           F  + ++        + +    +LA    +   +I GHTD       +R N  LS  RA 
Sbjct: 112 FAFNKAVLNKAAKQQIDQKVLPILAECKGIDGITITGHTDHL---GASRSNQILSEKRAA 168

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---------NSANRRIDILVED 340
           S    L   GVS      + G    +     D            + NRR+ I V  
Sbjct: 169 SVAGYLKTKGVSTK--MNVLGAGETQGVKLCDEKLPHGKLIACLAPNRRVLIEVHG 222


>gi|326410244|gb|ADZ67308.1| TraQ protein [Brucella melitensis M28]
 gi|326553537|gb|ADZ88176.1| TraQ protein [Brucella melitensis M5-90]
          Length = 78

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS----KISGFAH 317
             + I++RG TD S          +++  RA + Y  L+  GV   RI+     +  +A 
Sbjct: 1   MPKHINVRGLTDNSCPPPGDT---QVARVRALAIYNWLINQGVPASRITISYAPVKDYAS 57

Query: 318 HRLKIASDPMNSANRRIDILVEDR 341
           +       P    NRR+DI +  +
Sbjct: 58  NAPL---SPGRVLNRRVDIEILRK 78


>gi|254459885|ref|ZP_05073301.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
 gi|206676474|gb|EDZ40961.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 291

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 43/158 (27%), Gaps = 7/158 (4%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
               L      +      L      K  L         +  + ++    F          
Sbjct: 7   EPVALATQVASLQDNEESLAFFANAKANLMAQESCIGDLRSLTEQARVYFPAGGLTLDES 66

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
            I   + I  +        I + GH+D          N RLS  RA    Q L  +G+  
Sbjct: 67  GIAQARLIAALAQDCNGVEIIVEGHSD---PSGDPAVNLRLSQKRAEQVIQRLGATGLDI 123

Query: 307 DRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQ 342
               +  G    R      S+     +RR++ +V    
Sbjct: 124 SNF-RAEGLGSARPSNVTGSESDAYYDRRVEFVVIQTN 160


>gi|161523636|ref|YP_001578648.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC
           17616]
 gi|189351595|ref|YP_001947223.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC
           17616]
 gi|160341065|gb|ABX14151.1| cytochrome c oxidase, subunit II [Burkholderia multivorans ATCC
           17616]
 gi|189335617|dbj|BAG44687.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC
           17616]
          Length = 532

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSALPADAKAAIAAAADYANAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 528


>gi|29346921|ref|NP_810424.1| outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572383|ref|ZP_04849786.1| outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|29338819|gb|AAO76618.1| outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482]
 gi|251838158|gb|EES66246.1| outer membrane protein OmpA [Bacteroides sp. 1_1_6]
          Length = 364

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 45/122 (36%), Gaps = 5/122 (4%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                +V     + V+ +      ++ +   +    F  +S++   + +  +  + + + 
Sbjct: 231 EPEPAVVEQPKPEPVVAKEPEPKPVVVVEPMKQNIFFALNSALLQNDQLAKIDAMIKYME 290

Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH- 318
            +    +++ G+ D        + N  LS  RA +  + L   G++ DRI   S      
Sbjct: 291 KNPTSKVAVTGYADKE--TGNPKINMTLSEKRAKNVVEALKAKGIAADRIIT-SYKGDTV 347

Query: 319 RL 320
           + 
Sbjct: 348 QP 349


>gi|330950601|gb|EGH50861.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae Cit 7]
          Length = 129

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  SS   PE +  L    + L  +   + + G+TD          N  L   RA +  
Sbjct: 68  FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124

Query: 297 QVLM 300
           + L+
Sbjct: 125 RYLV 128


>gi|320329251|gb|EFW85248.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330880852|gb|EGH15001.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 240

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 9/208 (4%)

Query: 95  QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154
                    + + + S D +    +        ++ I    +  ++E   + L   ++  
Sbjct: 21  GGAGHQDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVA 80

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVK 213
                S+   +   +  N  L      K+   +++ +L     K++S        ++ + 
Sbjct: 81  HYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQIL 140

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHT 272
            +    T  G+++++ D     +FD   +         + K+ + L  +   V+ I G+T
Sbjct: 141 SLATTETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYT 196

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM 300
           D++      ++N +LS DRA +   VLM
Sbjct: 197 DST---GDRQENLKLSKDRAQAVADVLM 221


>gi|301597288|ref|ZP_07242296.1| OmpA/MotB domain protein [Acinetobacter baumannii AB059]
          Length = 216

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+  S++       +L ++   L         I GHTD+      A  N +LS DRA + 
Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210

Query: 296 YQVLMK 301
              L+ 
Sbjct: 211 KNYLIS 216


>gi|301598138|ref|ZP_07243146.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
           AB059]
          Length = 45

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 3/46 (6%)

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+   +  D +S   G    +    +        NRRI+  V 
Sbjct: 1   KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 45


>gi|281420786|ref|ZP_06251785.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205]
 gi|281405078|gb|EFB35758.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205]
          Length = 381

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 20/164 (12%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +  +    +N + N     L+ +      + K+++DL   ++                 
Sbjct: 215 PRDQNEIDGLNGQINNLRNDLNSKDSELAAKDKQIKDLQNALNECQKAPKYVKPATATNL 274

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
           + T               +F    S      +  ++ I + + +  +  + I+G+     
Sbjct: 275 QPT--------------VLFTVGKSKVERSQMPNIEMIAQYMKNHPDAKVEIKGYASPE- 319

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319
                  N +LS  RA +   +L+K   +S +R+    G     
Sbjct: 320 --GSKELNQKLSEARANAVKNILVKTYKISANRLQA-KGMGATD 360


>gi|213025158|ref|ZP_03339605.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 69

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+ + S   PE    L ++   L++       + + G TD          N  LS
Sbjct: 1   KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 57

Query: 289 LDRAYSAYQVLM 300
             RA S    L+
Sbjct: 58  EKRAQSVVDYLI 69


>gi|171059315|ref|YP_001791664.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170776760|gb|ACB34899.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 271

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 65/217 (29%), Gaps = 12/217 (5%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184
            RL  +        Q+   ++      E  + L     +       EN         K  
Sbjct: 58  ARLRIDDTVGRLQGQAPDERSRAALTGEANRLLRPLMGVPGVFLHLENQAQLNEELPKRP 117

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                + L DL   ++   +G  +         E     +            F   S+  
Sbjct: 118 PAPPPEPLDDLLANLAPPGAGKSSARGPDLAACEKAFGAVQ-----AARAIRFKPGSAQL 172

Query: 245 LPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
               + V+ +I  +        + I GH D          N RLS  RA +    ++  G
Sbjct: 173 EQAAMPVVHQIAALAQRCSRWRVIIEGHADT---SGDPVQNERLSRRRAAAVAAAMILEG 229

Query: 304 VSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338
           V  D+I  + G    R   AS    +   NRRI+  +
Sbjct: 230 VPLDQIESV-GRGASRPIAASSDAQASVKNRRIEFHL 265


>gi|255692006|ref|ZP_05415681.1| outer membrane porin F [Bacteroides finegoldii DSM 17565]
 gi|260622419|gb|EEX45290.1| outer membrane porin F [Bacteroides finegoldii DSM 17565]
          Length = 380

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++         +   F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGLVPRLVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303
               + ++ + + +  +     +I G+ D       A  N +LS  RA +   +++   G
Sbjct: 291 KREYMNIEAMAKGIKENPGKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 348

Query: 304 VSEDRI 309
           V   ++
Sbjct: 349 VPASQL 354


>gi|213864669|ref|ZP_03386788.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
          serovar Typhi str. M223]
          Length = 37

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 9  QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVL 44
          +     II+ K+          GSWKI YADFMT +
Sbjct: 2  KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAM 37


>gi|78059712|ref|YP_366287.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
 gi|77964262|gb|ABB05643.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
          Length = 235

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 19/219 (8%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
           +   S++        ++           +   L + ++            + +  + +++
Sbjct: 17  LAACSSASGPTFNAYAVDLADGSRAFRVECHGLFEPLSACMREAQRVCGDQPVRLLDQQQ 76

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLPE 247
           RL D  +KI  T +           +  T        I+   +  +F           PE
Sbjct: 77  RLSDPVQKIDDTDAMTFQCGAPPQPVVATPVPVEEKPIVLAAD-ALFAFDEGDVDAINPE 135

Query: 248 TIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
               L +I   L        I + G+TD          N  LS  RA      L   GV+
Sbjct: 136 GRAELDEIAAKLIAMPAVRHIDVAGYTDRL---GSKEYNVALSQRRAEVVKWYLTSRGVT 192

Query: 306 EDRISKISGFAHHRLKIASDPM-NSA-------NRRIDI 336
                   G        + +    +        +RR++I
Sbjct: 193 AA--IDARGHGKVLPGTSCEMHIRAELIRCLSPDRRVEI 229


>gi|294828486|ref|NP_714363.2| endoflagellar motor protein [Leptospira interrogans serovar Lai
          str. 56601]
 gi|293386339|gb|AAN51381.2| endoflagellar motor protein [Leptospira interrogans serovar Lai
          str. 56601]
          Length = 216

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
           YAD +T+L+  F++M+ I+  D    K +  
Sbjct: 2  TYADMITLLLGLFIIMYSISQVDQTKLKQVAD 33


>gi|225620698|ref|YP_002721956.1| OmpA family protein [Brachyspira hyodysenteriae WA1]
 gi|225215518|gb|ACN84252.1| OmpA family protein [Brachyspira hyodysenteriae WA1]
          Length = 213

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283
              I++     +F    +       +   ++ E L  +  V  +   HT           
Sbjct: 77  RGRILETTPKVIFKFVETNMPATAEMSFNQVVEFLEKNPNVNIVLEAHTSNR--GKAYPY 134

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338
           N+ LS+ RA +    L+  G+  +R+ + S       +  +      N  RR + ++
Sbjct: 135 NYNLSVVRAKNGKAYLLAKGIPSERVIE-SPLGEALPEYPT-----QNELRRYEFVI 185


>gi|325474220|gb|EGC77408.1| OmpA family protein [Treponema denticola F0402]
          Length = 167

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 4/146 (2%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           +   K+     +        + V  ET +     ++ D   T  F   S      T  +L
Sbjct: 20  KSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQTDQFTAQIL 79

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
           ++IGE L        +     A        D   L   RA +      K  + +     +
Sbjct: 80  KEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIAL--QRAIAVASYFQKMKLFDANNIIV 137

Query: 313 SGFAHHRLKIASD--PMNSANRRIDI 336
            G        +         NRR++I
Sbjct: 138 EGKGAREPARSHSEITDRFKNRRVEI 163


>gi|189466076|ref|ZP_03014861.1| hypothetical protein BACINT_02446 [Bacteroides intestinalis DSM
           17393]
 gi|189434340|gb|EDV03325.1| hypothetical protein BACINT_02446 [Bacteroides intestinalis DSM
           17393]
          Length = 372

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
               F+ +SS+        +  +   L  + +  +SI G+ DA         N RLS +R
Sbjct: 271 ENIFFNINSSVIRSSEESKIANLVAFLQKNADVKVSICGYADA--GTGTTAINLRLSKER 328

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVED 340
           A +  + L   G++ DRI  +       +    ++       R+ I + +
Sbjct: 329 ALAVEKALKAKGIAADRIM-VDFKGDKVQPFSTNNEN-----RVAICITE 372


>gi|124267308|ref|YP_001021312.1| membrane-bound proton-translocating pyrophosphatase [Methylibium
           petroleiphilum PM1]
 gi|124260083|gb|ABM95077.1| Inorganic diphosphatase [Methylibium petroleiphilum PM1]
          Length = 823

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I + +      F  +SS         L  + + +A   +   I G+ DA+        N 
Sbjct: 720 IKVENGVVKFYFASASSSLAGGAAEALADVVKGVAA-GKKAVISGYHDAT---GDPDKNV 775

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVE 339
            L+  RA +    L  +GV+ED+I         +     A D   +  RR+++ +E
Sbjct: 776 ELAKQRALAVRDALKAAGVAEDKIEL------KKPEQLNAGDAAEA--RRVEVKLE 823


>gi|325266116|ref|ZP_08132800.1| outer membrane protein A [Kingella denitrificans ATCC 33394]
 gi|324982346|gb|EGC17974.1| outer membrane protein A [Kingella denitrificans ATCC 33394]
          Length = 178

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 21/132 (15%)

Query: 225 LISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVL---AHSTEVISIRGHTDASPFR 278
            +  I+     +F  + S      P+    L ++   L       + I++ GHTD     
Sbjct: 46  QVERINLAADALFQFNRSSVKDLLPQGRATLDELAARLVSRQAQIDSIALVGHTDRL--- 102

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----DPMNSA--- 330
              + N+ L L RA +    L + GV +            +                   
Sbjct: 103 GSEQYNYNLGLKRAETVKAYLQEKGVQDP--ISTRSAGETQPVTTDCHGTRATAALKACL 160

Query: 331 --NRRIDILVED 340
             +RR+ + +  
Sbjct: 161 QPDRRVVVEITG 172


>gi|72161146|ref|YP_288803.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Thermobifida fusca YX]
 gi|71914878|gb|AAZ54780.1| similar to Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins [Thermobifida
           fusca YX]
          Length = 310

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 53/208 (25%), Gaps = 33/208 (15%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             L      E    ++    E        T  E      +    PP      L    + +
Sbjct: 87  AVLFPPAAPEQDTIAVDTPEESANPATPPTTAEPQERTADADVSPPQEDAAPLPEDHRAQ 146

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             +         +     +  + +                     F  + +    E IV 
Sbjct: 147 ADE---------NHEPQADPPRTITAVVH----------------FSHNGTELTYEGIVE 181

Query: 252 LQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRI 309
           LQ    E  A     + I G+ D +        N ++SL R+  A   L +   V     
Sbjct: 182 LQRFAEEAAAADASWVRIDGYGDDT---GTPEANLQVSLQRSEEAAAFLQEMMPVDGVAF 238

Query: 310 SKISGFAHHRLKIASDP--MNSANRRID 335
               G         +      + NRRI+
Sbjct: 239 ITA-GHGAANPIADNSTVEGRARNRRIE 265


>gi|315104919|gb|EFT76895.1| OmpA family protein [Propionibacterium acnes HL050PA2]
          Length = 284

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287
           D   + +FD  S +  P  + ++ +  + L     +  I + G+TD+      A  N  L
Sbjct: 198 DLDASVLFDLDSDVVKPAGLQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 254

Query: 288 SLDRAYSAYQVL---MKSGV 304
           S  RA S  +VL   +  G+
Sbjct: 255 SRRRAASVAKVLGSQLSKGI 274


>gi|296131330|ref|YP_003638580.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
 gi|296023145|gb|ADG76381.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
          Length = 412

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 15/89 (16%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                V+ + GHT             R+S DRA +    L   GV+ + +  + G    R
Sbjct: 318 EEPAWVVRVEGHTADFGTPEGRA---RVSQDRADAVAAALRSQGVTNE-VVAV-GRGADR 372

Query: 320 LKIAS---------DPMNS-ANRRIDILV 338
            +            D   +  NRR++I +
Sbjct: 373 PRADEWPAGPRGPHDTAAADVNRRVEIRL 401


>gi|281421751|ref|ZP_06252750.1| putative immunoreactive antigen PG33 [Prevotella copri DSM 18205]
 gi|281404246|gb|EFB34926.1| putative immunoreactive antigen PG33 [Prevotella copri DSM 18205]
          Length = 390

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 26/174 (14%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +IN      L  L+ +   A     RL++L           V + +   V          
Sbjct: 240 AINALHQSELDALNAKLNDANAENDRLKNLLNNQKPVEEKAVKEYVATPVSV-------- 291

Query: 226 ISIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
                      F+   S +   + +V +Q + +    +   + + G+ D+      A  N
Sbjct: 292 ----------FFNIGKSKVASKKDLVNVQALAQYAKDNNAKLVVNGYADS--ATGSAAVN 339

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
            ++S  RA    + L+K GV+++ I  +         +      S NRR  + V
Sbjct: 340 QKISKARAEKVAEELVKLGVAKENIV-VKANGG----VKDLTPASYNRRATVQV 388


>gi|298385171|ref|ZP_06994730.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
 gi|298262315|gb|EFI05180.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
          Length = 365

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272
            V+ +      ++++   +    F  +S+    +    + ++ E L  +    + + G+ 
Sbjct: 245 PVVEQPQPKKEVVTVQPMKQDIFFALNSARIQDDQKSKIDELAEYLQKNPSAKVQVTGYA 304

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSAN 331
           D       +R N  LS  RA +    L   G+S DRI  I       +     +      
Sbjct: 305 D--VNTGNSRINKTLSDKRAVNVADALKTKGISTDRII-IDSKGDTVQPYKTPEEN---- 357

Query: 332 RRIDILV 338
            R+ I +
Sbjct: 358 -RVSICI 363


>gi|296126315|ref|YP_003633567.1| outer membrane protein [Brachyspira murdochii DSM 12563]
 gi|296018131|gb|ADG71368.1| outer membrane protein [Brachyspira murdochii DSM 12563]
          Length = 205

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   +++ +         + +++ ++  +   + G++        A  N++LS  RA ++
Sbjct: 86  FGFDNTVEIGSYKEAYNLVYQIIKNNPNIRIMVEGNSSKE---GPAPYNYQLSQRRADTS 142

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +  ++K G    R+ K + F     +  +      NRR + ++
Sbjct: 143 FNYIIKLGSENSRLLK-NAFGEALPEYPTLKE---NRRCEFII 181


>gi|294853085|ref|ZP_06793757.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294818740|gb|EFG35740.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 78

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS----KISGFAH 317
             + I++RG TD +          +++  RA + Y  L+  GV   RI+     +  +A 
Sbjct: 1   MPKHINVRGLTDNNCPPPGDT---QVARVRALAIYNWLINQGVPASRITISYAPVKDYAS 57

Query: 318 HRLKIASDPMNSANRRIDILVEDR 341
           +       P    NRR+DI +  +
Sbjct: 58  NAPL---SPGRVLNRRVDIEILRK 78


>gi|163739583|ref|ZP_02146992.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis
           BS107]
 gi|161387042|gb|EDQ11402.1| putative outer membrane protein [Phaeobacter gallaeciensis BS107]
          Length = 624

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 65/222 (29%), Gaps = 12/222 (5%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
              S        +   +   +  +   +   +  +      TR    G  +    D +++
Sbjct: 384 QPGSNVTTYKFKDGSTRTVVVREDGAEVETIRARDGRVLRRTRTLTDGSSVVLFDDTQRA 443

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            N   +       ++   +       +      +     +     ++ +        ++ 
Sbjct: 444 DNVVVSELPTAAPRKSAFSSDTIDADELALVLAAKEAPAVSRRFSLRQIRNIDAVRRLVP 503

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIA 281
            I  Q     F+  S++        L  +G  L         EV  I GHTDA      A
Sbjct: 504 EITVQSIN--FETGSAVIRAAEAEELAALGNALRDMIAQNPQEVFLIEGHTDAV---GAA 558

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322
             N  LS  RA S    L +   V  + +  + G+    L +
Sbjct: 559 PFNLGLSDRRAESVALALTEYFKVPPENMV-VQGYGETDLAV 599


>gi|282878153|ref|ZP_06286950.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281299731|gb|EFA92103.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 385

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 14/163 (8%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             +    + ++  L  +++   +       +            +   +    +  F+ + 
Sbjct: 233 DAIKALSQSQIDALNAQLNDANAENARLKDMLANQKPAETPATVKEFVTTPVSVFFNINK 292

Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     + +V +Q + +    +   + + G+ D+       + N  LS +RA +    L+
Sbjct: 293 TNIASQKDLVNVQAVAKYAKENNSRLMVNGYADS--ATGKPKYNQWLSEERAKTVANELV 350

Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340
           K GVS D IS   G                 S NRR  + V +
Sbjct: 351 KMGVSRDNIST-KGNGGVDELSPI-------SFNRRATVQVSE 385


>gi|187924373|ref|YP_001896015.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
 gi|187715567|gb|ACD16791.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
          Length = 240

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286
           ++  +F    S      P     L ++   +  S  V S+   GHTD          N+ 
Sbjct: 122 QSDALFAFGQSSRASILPGGAAALDQVIARIRQSRGVQSVSVVGHTDRL---GPETVNYP 178

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
           LSL RA +  + ++  G+  + +   +G   H 
Sbjct: 179 LSLARAQTVREYMIDHGLDGE-LIHATGVGSHN 210


>gi|330818392|ref|YP_004362097.1| Cytochrome c oxidase, subunit II [Burkholderia gladioli BSR3]
 gi|327370785|gb|AEA62141.1| Cytochrome c oxidase, subunit II [Burkholderia gladioli BSR3]
          Length = 537

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD + S +P      +        AH    +++ G+TD +     A  N  L+  RA + 
Sbjct: 441 FDTNKSDLPGDAKAAIDAAAQYASAHPDAKLALSGYTDKT---GSASANAELAKHRAQAV 497

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+EDRI       I+G A  +         +  RR++I
Sbjct: 498 RDALKAAGVAEDRIVLKKPQTITGGADAK--------EA--RRVEI 533


>gi|149910430|ref|ZP_01899071.1| hypothetical protein PE36_04773 [Moritella sp. PE36]
 gi|149806489|gb|EDM66460.1| hypothetical protein PE36_04773 [Moritella sp. PE36]
          Length = 254

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 54/177 (30%), Gaps = 16/177 (9%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
                 L      G  +  + D      +                ++  + L D+     
Sbjct: 49  AGGPIGLVLGIAAGDWINNTWDKSIESEQLTAENQQATENLLASELQNNQLLHDVLILDQ 108

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                   + + + ++ ++ +  +           +F  + S    +    L ++ + L 
Sbjct: 109 QLQQVSETEELNQQLILDSLQLDL-----------LFAVNQSAIDTKNQARLTQLSDYLI 157

Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            +  +  +  GH D          N  L+  RA +    L+  GV+E+ I ++  F 
Sbjct: 158 DNPTMNIVLSGHAD---PSGQEELNMNLAQQRAVAVQDQLIALGVNENNI-QVQSFG 210


>gi|88798781|ref|ZP_01114364.1| ABC-type phosphate transport system, periplasmic component
           [Reinekea sp. MED297]
 gi|88778544|gb|EAR09736.1| ABC-type phosphate transport system, periplasmic component
           [Reinekea sp. MED297]
          Length = 445

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 76/277 (27%), Gaps = 21/277 (7%)

Query: 71  PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL--E 128
           P   +      G +D  N         +      + + + +   + ST     +  L   
Sbjct: 182 PVSVHARDNQSGTYDTFNTLVLKRGYDLTADAARYESNDVLSATVSSTPGAIGFTSLASI 241

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                ++                               IN    + L  L   +  A ++
Sbjct: 242 GEANAVAVIDGDSTPMRPQNATIATEDYPLARRLYLYEINSANAFVLDFLRFARSQAGQQ 301

Query: 189 K-KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              +   +++ + S    +                 I  +         F   ++    +
Sbjct: 302 VVAQTGFVSQNLQSMPMPVSGTLPAGYTFISENSERITTNFR-------FRPGTNHLDNK 354

Query: 248 TIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            +  L ++   +A          + G +D     N       +S  R     + L + G+
Sbjct: 355 AMDDLDRLAAFMARPENKDRKLILIGFSDQQ---NNEFRAQLVSEARVIQVKRALAEKGI 411

Query: 305 SEDRISKISGFAHHRLKIAS-DPMNS-ANRRIDILVE 339
                  ++G+ H     ++ DP  +  N+RI++ + 
Sbjct: 412 QSS---ALTGYGHLNPVASNVDPKYALRNQRIEVWIR 445


>gi|302340145|ref|YP_003805351.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
 gi|301637330|gb|ADK82757.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 343

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 59/204 (28%), Gaps = 8/204 (3%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           ++   ++T      +          +  K        +  ++  A    +          
Sbjct: 143 KNTDRTVTASVSAEESRHSEESSPAATGKMTQEASETIETQQSPAKPSPQASSPPPTSPP 202

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                       +      T +      +++R    F  + S    E    L+  G  L 
Sbjct: 203 QEQPQEQRKIAEQEPTAPVTASAFR--SVEKRAVIYFHPNDSELTAEAQTQLRVFGRQLR 260

Query: 261 HST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
                + +SI GH          +    LS +RA ++   L   G+   +   +  FA  
Sbjct: 261 EWNSIDAVSIEGHC---ALLGTEKGRIELSRERAENSAAFLETIGIPA-QGVSLQWFAGE 316

Query: 319 RLKIASDPMNSANRRIDILVEDRQ 342
           R           NRR++I  + ++
Sbjct: 317 RPATRDPDKQELNRRVEISAKGKE 340


>gi|294508280|ref|YP_003572338.1| Motility protein B [Salinibacter ruber M8]
 gi|294344608|emb|CBH25386.1| Motility protein B [Salinibacter ruber M8]
          Length = 181

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 8/126 (6%)

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265
             N+ + V           +    +    F   S+         L +    +        
Sbjct: 39  NQNLTRQVQALRDSLRAREAGTTLQPPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAG 98

Query: 266 ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRL 320
             I+G+TD  P           NW LS  RA +    L     +    + +I  F    +
Sbjct: 99  FRIQGYTDPVPIGPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASL-EIEAFGPRTM 157

Query: 321 KIASDP 326
               + 
Sbjct: 158 VGPDET 163


>gi|320537035|ref|ZP_08037014.1| OmpA family protein [Treponema phagedenis F0421]
 gi|320146110|gb|EFW37747.1| OmpA family protein [Treponema phagedenis F0421]
          Length = 165

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289
              T  F   + +    T   L  I E L   +   + I GH+             +LSL
Sbjct: 59  DGFTVYFAPDTYVIDSFTAHKLDVIAEQLKAQNITHVKITGHSAKLDTAKAEN---KLSL 115

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336
            RA +  +     G+ +    ++ G   +    +         NRR++I
Sbjct: 116 QRAVAVAEYFRSIGLFDADSMELEGLGANEPAGSHAEITKRHYNRRVEI 164


>gi|319900004|ref|YP_004159732.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319415035|gb|ADV42146.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 616

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S    PE++  L++  + +       +   G  D          N+RLS  RA   
Sbjct: 500 FDFDSDALTPESVQRLERFVDEMGTYDFSELRFDGFADEI---GSDSYNYRLSERRAEQV 556

Query: 296 YQVLMKSGVSEDRISKISGF 315
              L   G+  +   +  G 
Sbjct: 557 ADFLRARGIDVNFNIQAHGR 576


>gi|163801589|ref|ZP_02195487.1| hypothetical protein 1103602000597_AND4_09052 [Vibrio sp. AND4]
 gi|159174506|gb|EDP59308.1| hypothetical protein AND4_09052 [Vibrio sp. AND4]
          Length = 1582

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 73/220 (33%), Gaps = 20/220 (9%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
           +          +    ++  D   +   +    KE    L   ++  + ++   +R  + 
Sbjct: 553 SGTNRALPAIGVIASGKEALDQYSAFSEQIQNAKEAQETLSKYAENYLSSLTFVRRFDNP 612

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
                   +   A              G+++ +  + N+  F+    +   + I V +K+
Sbjct: 613 EHWQKKAETVQEALGKEGNAQIFADGQGVVVRMNFKFNSAEFENEVQVLHIDYIEVCKKL 672

Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-----I 309
            ++L+ + +    I GH           +N ++S  RA    + ++     E+R      
Sbjct: 673 CQLLSQNPDYQVAIIGHA---GPIGTHENNLKISKMRADVVKEAILAKASGEERANLESR 729

Query: 310 SKISGFAHHRLKIA-------SDPMN----SANRRIDILV 338
             I      +L          +D  +    + NRR+++ +
Sbjct: 730 LWIEFKGKSQLIDDIDGYDDVNDRSDNADIAVNRRVEVRL 769


>gi|59713902|ref|YP_206677.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
 gi|59482150|gb|AAW87789.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
          Length = 1613

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 20/205 (9%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
               L       +  + +E       + + +  +   K   D AK++S     L  D   
Sbjct: 568 DFYQLVDKQGELEKQSTKEQENFDGATTDYLQKIVMVKAEADWAKQLSDATKVLNNDGKE 627

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271
           +     T  +  +I I  + N+     + +    +   V +KI E+L    +    I GH
Sbjct: 628 QIARIITQGSRAIIHINFKFNSSELPNTGTTLRSDIDKVCEKIAELLKTHPDYRIQIDGH 687

Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS----GVSEDRISKISGFAHHRLKIA---- 323
                     + N  ++ DRA    Q ++          +RI  +S   + +   A    
Sbjct: 688 AGRI---GSDKANKTIAEDRAKQVEQAILDKAKEDNTLPERIITLS-HGNTQPISAGNAK 743

Query: 324 -------SDPMNSANRRIDILVEDR 341
                   D   + +RR++I +   
Sbjct: 744 VDMSETGDDSALAEDRRVEISLLPP 768


>gi|117924306|ref|YP_864923.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117608062|gb|ABK43517.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
          Length = 255

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 24/171 (14%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            +A + + R      +I+     L        +     R    +S     N+  F+  S 
Sbjct: 44  AVASRDEVRQNQRKDEITKVFDALEQSAAQSNLPLVINRKEQTLSFG---NSARFELDSF 100

Query: 243 IPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
               +    L+    +L            + + I G+TD          N RLS++RA +
Sbjct: 101 YLSAQVRQQLKDFVPMLLKVRKKGEGKWLKRVHIEGYTDDI---GTYLYNVRLSMNRAQA 157

Query: 295 AYQVLMKSGVSED------RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
               LM++ VSE       R+  I G A      +       +RR++I +E
Sbjct: 158 VLCTLMEAEVSEAQRRELQRMIIIDGAAST----SIRSSREESRRVEIRLE 204



 Score = 39.6 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
          +K++ + D       W I YAD MT L+  FLV+  I+     ++  + Q
Sbjct: 9  RKRLDVGDN----PFW-ISYADLMTALVMLFLVVMSISMIAVASRDEVRQ 53


>gi|294054986|ref|YP_003548644.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221]
 gi|293614319|gb|ADE54474.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221]
          Length = 191

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 38/115 (33%), Gaps = 20/115 (17%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F   SS         LQ+    L+ +  + + I GH D   +      N  L   R+ 
Sbjct: 88  VYFGFDSSAIGASERGKLQQAANHLSQNPSDGLLIEGHCD---WHGTTEYNLALGDRRST 144

Query: 294 SAYQVLMKSGVSEDR--------ISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           SA   L   G+   R        +   SG +            S +RR D+++  
Sbjct: 145 SALDYLSTLGIDSSRVELLSKGSLEATSGLSKSD--------ASQDRRADLIILK 191


>gi|304384242|ref|ZP_07366653.1| possible major outer membrane protein OmpA [Prevotella marshii DSM
           16973]
 gi|304334558|gb|EFM00840.1| possible major outer membrane protein OmpA [Prevotella marshii DSM
           16973]
          Length = 383

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                +   + +    +  L  L  ++S   +       +      T  T    +     
Sbjct: 222 ATWSKVPDTEAMRALSQAELDALNAQLSDANAENERLQTLLNEQKPTEETATPAAPPVTE 281

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
            +  FD    +  P+ +V +  + +    +   +++ G+ D+      A  N  L+  RA
Sbjct: 282 VSVFFDHDDVLSSPKDLVDVAALADYAKENHAKLTVTGYADS--ATGHAEQNQTLAERRA 339

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
                 L+K G++++ IS ++     +L          NRR  + + 
Sbjct: 340 QCLANELIKMGIAKEDISIVAKGGVSQL-----SPAPYNRRATVQIT 381


>gi|126174068|ref|YP_001050217.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
 gi|125997273|gb|ABN61348.1| OmpA/MotB domain protein [Shewanella baltica OS155]
          Length = 276

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 9/255 (3%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           + P  S   ++ L       + S+D  + ++      +    +    +            
Sbjct: 16  SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
                 G  +   T      +  +   L    ++  L   +   L    +          
Sbjct: 76  LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEK--RASE 133

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266
                + +    +    L+S +       F   SS      +  L  + EV+  S E  +
Sbjct: 134 YAKAQQDLDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            ++G+ D          N  LS  R       L+  GV+ +R++    F       A   
Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIMQGVAAERMTT-QAFGALSPLQAEQD 249

Query: 327 MNSA--NRRIDILVE 339
             S   +RR+ + ++
Sbjct: 250 RESDVFDRRVTLTLQ 264


>gi|253567814|ref|ZP_04845225.1| outer membrane porin F [Bacteroides sp. 1_1_6]
 gi|298384713|ref|ZP_06994273.1| outer membrane porin F [Bacteroides sp. 1_1_14]
 gi|251841887|gb|EES69967.1| outer membrane porin F [Bacteroides sp. 1_1_6]
 gi|298262992|gb|EFI05856.1| outer membrane porin F [Bacteroides sp. 1_1_14]
          Length = 381

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++S L G         V     +  +++         +   F+   S   
Sbjct: 233 ESQLDDMRNRLNS-LKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 291

Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303
               + ++ + + +  + E   ++ G+ D       A  N +LS  RA +   +++   G
Sbjct: 292 KREYMNIEAMAKGIKANPEKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 349

Query: 304 VSEDRI 309
           V   ++
Sbjct: 350 VPASQL 355


>gi|114562800|ref|YP_750313.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334093|gb|ABI71475.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 255

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 26/192 (13%)

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
                ++K    ++   L   +++ +    +++ L+ +++K     S L    + +    
Sbjct: 75  EAELSVQKQQLVQQEKKLTQTNEQLMALSTKQQSLEQVSEKYYQLQSNLAEQKVNQQQTL 134

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276
                G+ +          F    S   P     L  +  +++ S E  I + G+ D   
Sbjct: 135 NELTIGMNVQ---------FKTGLSHIEPLFEQQLDNVAYMMSLSPELTIDLTGYADRR- 184

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----- 331
                  N  LS  R     Q L+  G++ +R+     +               N     
Sbjct: 185 --GDNDFNQALSEQRLAEVTQYLVTQGIARERLH-GQAYGSTLPMHQE-----QNFENDF 236

Query: 332 --RRIDILVEDR 341
             RR+ + +   
Sbjct: 237 FDRRVTLKLLAP 248


>gi|297560201|ref|YP_003679175.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844649|gb|ADH66669.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 1124

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   S+    +    L  + E++    +    + I GHTD       A+ N  LS  RA 
Sbjct: 155 FGVGSAELTEQMRDDLAPVAEMIDSYGDTETPVRITGHTD---PSGNAQTNQELSERRAQ 211

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           +    L +    E    ++ G    + +   +   +A RR ++
Sbjct: 212 AVADHLDEVLGEEAPEMEVEGVGSEQPR---EGGAAAQRRAEV 251


>gi|116622486|ref|YP_824642.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225648|gb|ABJ84357.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 270

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 5/180 (2%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +EK   L    + E S   E+       + + + A ++ +     A + + + S  ++ N
Sbjct: 57  NEKIAYLDNKLNTEMSQANEQIATANQKATQAMDAAQQAQGTASRAMEETESNSAKISAN 116

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIR 269
                   +     L   + ++    F    +   P     L  I          VI + 
Sbjct: 117 AEATNTLASGMANALNYQLVEQGDVTFAFGKADLRPADKAALDAIVAKYNSLPRGVIELA 176

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G TD       A  N  LS  RA +  + L+   V   R   I G           P  +
Sbjct: 177 GFTDPI---GSANFNLALSRRRAQAVERYLVNQKV-PLRAINIVGLGKEMPPAPFAPDQA 232


>gi|300727058|ref|ZP_07060477.1| major outer membrane protein OmpA [Prevotella bryantii B14]
 gi|299775602|gb|EFI72193.1| major outer membrane protein OmpA [Prevotella bryantii B14]
          Length = 373

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 16/151 (10%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           KR+ +  K +   +  +V   +   V  E     +            F   S+       
Sbjct: 235 KRVVEAPKPVERIIERIVEKPVPTPVKEEKKVEALR-------KDVFFTIGSNKISATEE 287

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307
             ++++ + L  + +  +++ G+ DA      A+ N +++  RA +   +L  K GVSE 
Sbjct: 288 AKIKELVDYLNENKDAKVAVTGYADA--GTGSAKINEKIAAKRAQAVVAMLRDKYGVSES 345

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILV 338
           RI+  S  A+ +    +D     N R+ I +
Sbjct: 346 RITSDSKGAYIQPFSEND----KN-RVSICI 371


>gi|206603227|gb|EDZ39707.1| Putative outer membrane protein, OmpA/MotB family [Leptospirillum
           sp. Group II '5-way CG']
          Length = 179

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 11/103 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +    S+   E   +L+K   +L  +    + I GH D          N  L   RA +A
Sbjct: 72  YGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADER---GTDTYNIVLGQKRAKAA 128

Query: 296 YQVLMKSGVSEDRISKISGFAH-HRLKIA-----SDPMNSANR 332
              L+  G+ ++RI  +S +              ++   S NR
Sbjct: 129 MMYLVNLGIKKNRIKIVS-YGKRTIPGYDLCSDHNEQCWSKNR 170


>gi|124516387|gb|EAY57895.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum
           rubarum]
          Length = 179

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 11/103 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           +    S+   E   +L+K   +L  +    + I GH D          N  L   RA +A
Sbjct: 72  YGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADER---GTDTYNIVLGQKRAKAA 128

Query: 296 YQVLMKSGVSEDRISKISGFAH-HRLKIA-----SDPMNSANR 332
              L+  G+ ++RI  +S +              ++   S NR
Sbjct: 129 MMYLVNLGIKKNRIKIVS-YGKRTIPGYDLCSDHNEQCWSKNR 170


>gi|186475045|ref|YP_001856515.1| cytochrome c oxidase subunit II [Burkholderia phymatum STM815]
 gi|184191504|gb|ACC69469.1| cytochrome c oxidase, subunit II [Burkholderia phymatum STM815]
          Length = 557

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  F+ + SS+P      +        AH     ++ G TDA+     A  N +L+  
Sbjct: 456 PASVYFETNKSSLPTDAKAAIEAAAAYAKAHPDAKFALSGFTDAT---GSADKNAKLAKA 512

Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           RA +    L  +G++ED I       I+G A  +         +  RR++I
Sbjct: 513 RAEAVRDALKAAGIAEDHIILKKPETITGGADAK--------EA--RRVEI 553


>gi|301060006|ref|ZP_07200880.1| OmpA family protein [delta proteobacterium NaphS2]
 gi|300445885|gb|EFK09776.1| OmpA family protein [delta proteobacterium NaphS2]
          Length = 218

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 54/149 (36%), Gaps = 19/149 (12%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           + D  K ++  L+  +                  + ++ Q     F   SS+   + I  
Sbjct: 83  MDDRKKDLTKALAPQINAG-----EVTLQVLKGNVILVTQTGETAFAPGSSVVKQDFIST 137

Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +Q +  ++    ++   I GH D +  +        L+  RA +   + +  G+S   + 
Sbjct: 138 IQTVANIMKTYGKMTVDIIGHPDRTGTKTER---QTLADQRAEAVRTMFLGMGISPA-LV 193

Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339
           + SG A+ +             R+++++ 
Sbjct: 194 RSSGNANSQYLDG---------RVELVIT 213


>gi|258650298|ref|YP_003199454.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM
           44233]
 gi|258553523|gb|ACV76465.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233]
          Length = 378

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
             +  IS+ G T A P     +    LS  RA     +L + GV  + I+ + G      
Sbjct: 299 DPSTKISVEGRTAAVP-GGDPQGAIDLSTQRATEVAVLLQEVGVPGENITSVVGLGDSSP 357

Query: 321 KI--ASDPMNSANRRIDILVED 340
            +  ASDP    NR + +    
Sbjct: 358 LVQPASDPE---NRSVVVTFTS 376


>gi|255605082|ref|XP_002538335.1| conserved hypothetical protein [Ricinus communis]
 gi|223512676|gb|EEF24048.1| conserved hypothetical protein [Ricinus communis]
          Length = 210

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 9/88 (10%)

Query: 232 RNTPMFDKSS---SIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWR 286
            +  +F          LP     L +I   +    +V  I++ GHTD          N  
Sbjct: 127 ESDALFPFGKSAAYTMLPSAKAELDEIAARIRKHEQVSAIAVVGHTDRL---GPESLNGP 183

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISG 314
           LSL RA +    L+  G+    I +  G
Sbjct: 184 LSLARANTVRDYLIAHGLDGS-IIEAKG 210


>gi|163737938|ref|ZP_02145354.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
 gi|161388554|gb|EDQ12907.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
          Length = 518

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 51/166 (30%), Gaps = 14/166 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   LA  I++  S +  + + + V        +  S         F+ 
Sbjct: 361 DQAPERISMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFR-------FEP 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+ P  ++   + ++   L               S     A  N  ++  RA +    +
Sbjct: 414 GSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAV 473

Query: 300 MKSGVSEDRISK----ISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +      + +    I+ F         D       NRR+++ V 
Sbjct: 474 IAA-AETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518


>gi|239815340|ref|YP_002944250.1| membrane-bound proton-translocating pyrophosphatase [Variovorax
           paradoxus S110]
 gi|239801917|gb|ACS18984.1| V-type H(+)-translocating pyrophosphatase [Variovorax paradoxus
           S110]
          Length = 842

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 9/115 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + + +      F+   +   P     L  + + +  S  V+ + G+ DA         N 
Sbjct: 737 VKVENGVVKFYFESGKAEVAPNAKEALADVIKAV-QSGSVLLVSGYHDA---SGDPAKNA 792

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            L+  RA +    L  +G   D+I         + +       +  RR+++ V+ 
Sbjct: 793 ELAKQRAVAVGDALKAAGAPADKIELAK---PEQTQADGPASEA--RRVEVKVKA 842


>gi|330946477|gb|EGH47518.1| OmpA family protein [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 63

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339
           LS  RA +  + L+KSGV+      I G         +  D     NRR+++ V+
Sbjct: 12  LSRLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 63


>gi|218440795|ref|YP_002379124.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424]
 gi|218173523|gb|ACK72256.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424]
          Length = 222

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 22/154 (14%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            ++  + ++  LQ   + I   L   +   + + +             +   N  +FD+ 
Sbjct: 43  AQVQLLHKQDELQKYKEAIDQ-LPVKIIKALNETIPNSGIIVHPETGDVSLDNRILFDEG 101

Query: 241 SSIPLPETIVVLQKIGEV----------LAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           S+   PE    LQ+   +          L      + I GHT +   +    DN  LSL 
Sbjct: 102 SASLKPEGKQFLQQFIPIYSQHIFSNTLLDQQIIRVIIEGHTSS---KGSDSDNMELSLR 158

Query: 291 RAYSAYQVLMKSGVS-------EDRISKISGFAH 317
           RA S    +    ++       + ++   SG   
Sbjct: 159 RALSVSDYIFSDEINFPTKEKFQKKLLA-SGRGE 191


>gi|226226461|ref|YP_002760567.1| hypothetical protein GAU_1055 [Gemmatimonas aurantiaca T-27]
 gi|226089652|dbj|BAH38097.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 531

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 33/131 (25%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291
           +T +F    ++ L      L+ I +V+  +  +   I GHTD          N +L+  R
Sbjct: 378 DTTLFSFDRAVVLKAGNDTLKVIVDVMKANPSIRISIEGHTDWY---GSEAYNNKLAKSR 434

Query: 292 AYSAYQVLMK-SGVSEDRISKISGF---------------AHHR----LKI------ASD 325
           A + Y+ L+K +G   D    I G                                 A+ 
Sbjct: 435 AEAVYKQLLKVAGTDAD---AIKGRVVWSSFGEQCILVRDGDTEQEPPPANRSRISDANR 491

Query: 326 PMNSANRRIDI 336
              +ANRR++I
Sbjct: 492 RAQAANRRVEI 502


>gi|163743880|ref|ZP_02151251.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161382821|gb|EDQ07219.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
          Length = 518

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 51/166 (30%), Gaps = 14/166 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +   LA  I++  S +  + + + V        +  S         F+ 
Sbjct: 361 DQAPERISMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFR-------FEP 413

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S+ P  ++   + ++   L               S     A  N  ++  RA +    +
Sbjct: 414 GSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAV 473

Query: 300 MKSGVSEDRISK----ISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +      + +    I+ F         D       NRR+++ V 
Sbjct: 474 IAA-AETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518


>gi|29345828|ref|NP_809331.1| outer membrane porin F [Bacteroides thetaiotaomicron VPI-5482]
 gi|29337721|gb|AAO75525.1| outer membrane porin F precursor [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 372

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++S L G         V     +  +++         +   F+   S   
Sbjct: 224 ESQLDDMRNRLNS-LKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 282

Query: 246 PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303
               + ++ + + +  + E    + G+ D       A  N +LS  RA +   +++   G
Sbjct: 283 KREYMNIEAMAKGIKANPEKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 340

Query: 304 VSEDRI 309
           V   ++
Sbjct: 341 VPASQL 346


>gi|298369755|ref|ZP_06981072.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282312|gb|EFI23800.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 183

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 12/118 (10%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            + +        F    +        V+  + E      + + I G  D++     A  N
Sbjct: 76  QVVMDGGVAKFFFATGKNDVAEGAEQVVADLIEAGKE-GKKLVISGFADST---GNAASN 131

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
             LS  RA +        GV    I         + K  +     ++  RR+++ VE 
Sbjct: 132 QELSKKRAQAVQAFFEAHGVKAGNIEL------RKPKSTTGAEGNDAEGRRVEVKVEG 183


>gi|213964218|ref|ZP_03392452.1| OmpA family protein [Capnocytophaga sputigena Capno]
 gi|213953137|gb|EEB64485.1| OmpA family protein [Capnocytophaga sputigena Capno]
          Length = 346

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 84/290 (28%), Gaps = 15/290 (5%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD- 112
           ++A     K+              T S  I          ++   + +I    T  ++  
Sbjct: 62  LSAVKYKQKEMPYTSAVTEESKFATKSPTIVVGTASNTAVARTATNTAIARTATNTAIAR 121

Query: 113 --LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                 + +           +  ++ SQ          + ++  K + +    ++ +   
Sbjct: 122 NTAIPRTASTTTSRVMPRTTVAPMAVSQTRSSTTAIAQQVAQLSKSVDQLRKQQQLLLAA 181

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
                      K                I           +       +    +L +   
Sbjct: 182 LAANTGVGIATKNARATTVTPTTASQTPIVVQNVTATGVPMQISAERRSELEQLLAAYGH 241

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           ++    F  + S PL      + ++  +L    E  I + G+            N  LS+
Sbjct: 242 KKAVLYFANNKSEPLTYDPTTIDEMVTMLKTHPELSILLEGYASEV---GSVAYNNVLSM 298

Query: 290 DRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRRIDILV 338
            RA +  Q+L   G+S +RI +   G      ++   P  +  RR+++ V
Sbjct: 299 QRAVNVAQILKAKGISSERILTAFKGI---DPQVT--PAEA--RRVELRV 341


>gi|254251341|ref|ZP_04944659.1| Cytochrome c oxidase [Burkholderia dolosa AUO158]
 gi|124893950|gb|EAY67830.1| Cytochrome c oxidase [Burkholderia dolosa AUO158]
          Length = 533

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 437 FETGKSTLPADAKAAIAAAADYANAHPDAKLALSGFTDKT---GSADANAELAKQRAQAV 493

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 494 RDALKAAGVAEDHIVLKKPETITGGADAK--------AA--RRVEI 529


>gi|311696161|gb|ADP99034.1| OmpA/MotB domain protein [marine bacterium HP15]
          Length = 419

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 74/275 (26%), Gaps = 14/275 (5%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P          G +D         Q ++D +   + + + +   +        +  L +
Sbjct: 156 RPIHLYARDDRSGTWDTFKSLVLGKQFELDSNARRYESNDQLSDDVSRDPSGIGFSGLAS 215

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                  +    +             +    +          +              ++ 
Sbjct: 216 VRKSKLLAISEGNAPALHPNQLTVASEDYPLSRRLFMYTPGSDVPPLSAGLIGFALGQQG 275

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           + L   +  IS     +  +          +   +  +         F +  +    +  
Sbjct: 276 QALVAESGFISQNPIAVKPEFDE---STPESFRRLTSNYHRLTVNFRFSEGRTKLDNKAR 332

Query: 250 VVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             LQ++ + L  +    + + + G  D       A     +S  RA S  + L +  V +
Sbjct: 333 RDLQRVQQYLNQNGRSADDLLLIGFADTQSHELRA---QMISELRALSVRKALQEVNVPD 389

Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
                 +G+  +         +  N R+++ ++ R
Sbjct: 390 ---VAYTGYGQYMPV--GGSGSPRNGRVEVWIKSR 419


>gi|114762915|ref|ZP_01442347.1| Outer membrane protein, OmpA/MotB family [Pelagibaca bermudensis
           HTCC2601]
 gi|114544525|gb|EAU47532.1| Outer membrane protein, OmpA/MotB family [Roseovarius sp. HTCC2601]
          Length = 674

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 65/217 (29%), Gaps = 12/217 (5%)

Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177
            +   +      N   +   + ++       R    G+ +    D +       N     
Sbjct: 446 DDGSTRTVVQYENGNAVETVKAADGRVLRRIRTLPDGEQIVLFDDTQAEQQVVVNDLPQT 505

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
               + + ++     +  A   +   + +     +  +    T   ++  I        F
Sbjct: 506 QETPRRMNIREVDEAELAAALAAENGTDVGRTFSLNQIRNIDTVRHLVPEISVDSIN--F 563

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +  S+   P+    L  +G  +         EV  I GHTDA+        N  LS  RA
Sbjct: 564 ETGSAAIRPQEAQALAALGNAMKRVISDNPGEVFLIEGHTDATGGWG---YNLALSDRRA 620

Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328
            S    L +   V  + +  + G+    L I +    
Sbjct: 621 ESVALALTEYFDVPPENMV-LQGYGESDLAIETQTSE 656


>gi|300871695|ref|YP_003786568.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000]
 gi|300689396|gb|ADK32067.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000]
          Length = 190

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
            +   ++ + GH D    +     N  LSL RA     V++  G+S  R+  I  +++  
Sbjct: 88  NNRNAILIVEGHADEIS-KEKLDLNMMLSLQRASVIRDVIVSFGISHQRVK-IYPYSYFA 145

Query: 320 LKIASDPMNSANRRIDIL 337
            K  ++     NRR+D +
Sbjct: 146 PKYTTNTF--QNRRVDFV 161


>gi|148257389|ref|YP_001241974.1| hypothetical protein BBta_6143 [Bradyrhizobium sp. BTAi1]
 gi|146409562|gb|ABQ38068.1| Putative outer membrane protein [Bradyrhizobium sp. BTAi1]
          Length = 222

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 8/175 (4%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
                          ++   +    L   A K  +     +                 L+
Sbjct: 21  APARSQEVTRDDIVRQLARFEAAPTLDLPALKQQTQERSKLRGRNEPPPQKRPPIAPELM 80

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283
           ++        FD+ + I  P++   + +I + + HS        I GH +A         
Sbjct: 81  NLPALNVDIQFDQDTPIVRPDSYQTVGRIADAMVHSELLPYTFLIVGHVEA---NGRREP 137

Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           N  LS  RA +   +L  +  +S  R+  I G    +L   S P  S N++I I+
Sbjct: 138 NVILSQRRADAIRDILANTFKISVKRLQSI-GLGEEQLLDPSKPTASVNQQIQII 191


>gi|325299222|ref|YP_004259139.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324318775|gb|ADY36666.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 370

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 10/115 (8%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284
           + +   R    F  +SS         +  +   L   T+  +S+ G+ D       AR N
Sbjct: 262 VKVQPMRQNIFFLINSSEIRTSEQSKVNNLIAYLKEHTDAKVSLCGYAD--KNTGNARIN 319

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
            +LS +RA +  + L   G++ DRI  I       +     +       R+ I +
Sbjct: 320 KKLSQERAEAVAEALKAEGIAADRI-TIDYKGDTEQPFNVIEEN-----RVTICI 368


>gi|315607966|ref|ZP_07882959.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250435|gb|EFU30431.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 379

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +  +L    ++I+   + L   N     +   T T +  ++       +F +  S+  P 
Sbjct: 236 KDAQLAAKDRQIADLQNALDECNKKPKYVKPATATNLQPTV-------LFRQGKSVIDPA 288

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
               ++ I   +  +    + I+G+         A  N +LS  RA    + L+K   ++
Sbjct: 289 QYAPIELIATYMKKNPTAKVEIKGYASPE---GSAELNQKLSDARAEVVKKALIKKYKIA 345

Query: 306 EDRISKISGFAHHR 319
            DR++   G     
Sbjct: 346 ADRLTT-KGMGATD 358


>gi|288924935|ref|ZP_06418871.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|288338125|gb|EFC76475.1| conserved hypothetical protein [Prevotella buccae D17]
          Length = 379

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +  +L    ++I+   + L   N     +   T T +  ++       +F +  S+  P 
Sbjct: 236 KDAQLAAKDRQIADLQNALDECNKKPKYVKPATATNLQPTV-------LFRQGKSVIDPA 288

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305
               ++ I   +  +    + I+G+         A  N +LS  RA    + L+K   ++
Sbjct: 289 QYAPIELIATYMKKNPTAKVEIKGYASPE---GSAELNQKLSDARAEVVKKALIKKYKIA 345

Query: 306 EDRISKISGFAHHR 319
            DR++   G     
Sbjct: 346 ADRLTT-KGMGATD 358


>gi|4105267|gb|AAD02332.1| flagellar motor rotation protein MotB [Campylobacter jejuni]
          Length = 141

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F++ S+  +   I    K    L         I IRG+TD S     +     L+  RA 
Sbjct: 17  FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSY---ELAYQRAE 73

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           +  +  ++ G +   I  I  +  +     + P    N R++I 
Sbjct: 74  NVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 115


>gi|289207539|ref|YP_003459605.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288943170|gb|ADC70869.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 315

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 8/107 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
            R +  F   S          + +  E L         + G TDA         N RLS 
Sbjct: 176 DRWSVYFATGSRELDSRGRETVARAAETLRTVERPRVRLVGLTDAE---GPRELNERLSR 232

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
            RA +    L+++GV  D ++  +G      +   +   S  RR+DI
Sbjct: 233 QRAEAVRAALVEAGVPGDGLTVEAG--GVDPEADGEREGS--RRVDI 275


>gi|300870376|ref|YP_003785247.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli
           95/1000]
 gi|300688075|gb|ADK30746.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Brachyspira pilosicoli 95/1000]
          Length = 194

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    ++ + E       +  +L ++ E+   + G++        A  N+ LS+ R+ ++
Sbjct: 76  FQFDKAVEIGEYKQAYNLVYTILNNNPEIRIMVEGNSSKE---GKAPYNYNLSVRRSDTS 132

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           Y  L+K G   +R+ K + F     +     + + NRR + +V
Sbjct: 133 YNYLIKLGTKNNRLLK-NAFGEGLPEYP--TLEA-NRRTEFIV 171


>gi|288800862|ref|ZP_06406319.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332323|gb|EFC70804.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 394

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 12/171 (7%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
              P +   K L+  +   L       ++  + L      +    +      +   I   
Sbjct: 233 DNAPDVDAIKALSQSQIDALNAQLNDANAENARLKDLLSKQPDQQQPVENKTVKEFIMTP 292

Query: 233 NTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            T  F+   +     + I  +  + +    +   + + G+ D+         N  LS +R
Sbjct: 293 ITVFFNLDKTNIASKKDIFNIAGVAKYAKANNANLLVTGYADS--ATGKPGHNQWLSEER 350

Query: 292 AYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIASDPMNSANRRIDILVED 340
           A +    L+K GV+ D I   +  G                NRR  + + +
Sbjct: 351 AKTVANELVKMGVNRDNIKTDARGGVNELSPI-------QFNRRATVQITE 394


>gi|153808039|ref|ZP_01960707.1| hypothetical protein BACCAC_02325 [Bacteroides caccae ATCC 43185]
 gi|149129648|gb|EDM20862.1| hypothetical protein BACCAC_02325 [Bacteroides caccae ATCC 43185]
          Length = 380

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245
           + +L D+  +++  L G         V     +  +++         +   F+   S   
Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 290

Query: 246 PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303
               + ++ + + +  + +    + G+ D       A  N +LS  RA +   +++   G
Sbjct: 291 KREYMNIEAMAKGIKANPDKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 348

Query: 304 VSEDRI 309
           V   ++
Sbjct: 349 VPASQL 354


>gi|304383452|ref|ZP_07365915.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304335416|gb|EFM01683.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 380

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 13/156 (8%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            +     E +     ++  +     +  +L    ++I+   S L   N     +   T T
Sbjct: 211 AQMRDQGEIDGLNAQINDLRNNLNGKDAQLSAKDRQIAELQSALDECNKKPKYVKPATVT 270

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
            +  ++       +F +  +   P     ++ I   +  +   V+ I+G+          
Sbjct: 271 NLQPTV-------LFRQGKADIDPAQYAPIELIATYMKKNPSAVVEIKGYASPE---GNP 320

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316
             N +LS  RA +    L+K   ++ +R+    G  
Sbjct: 321 ELNQKLSDARAEAVKNALIKKYKIAANRLIT-KGMG 355


>gi|253571969|ref|ZP_04849374.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|251838566|gb|EES66652.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
          Length = 363

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 10/144 (6%)

Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256
             I      +V +      + E  +    +     +    F  +S+    +    L  + 
Sbjct: 226 APIYYEPEPVVVEQPKPAPVVEQPQPKKEVVAEPMKQNIFFALNSAKIQDDQQAKLVSLI 285

Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           E L       ISI G+ D +      + N +LS  RA +  + L   G++ DRI  I   
Sbjct: 286 EYLETHPAAKISITGYADVN--TGNPKINSKLSEKRAVNVAEALKVKGIAADRIK-IDFK 342

Query: 316 AHH-RLKIASDPMNSANRRIDILV 338
               +     +       R+ I +
Sbjct: 343 GDTVQPYATPEEN-----RVSICI 361


>gi|254446133|ref|ZP_05059609.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
 gi|198260441|gb|EDY84749.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
          Length = 163

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 6/110 (5%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
              +F   SS   P     L ++   L  +  V  +  GH D          N  L   R
Sbjct: 58  EPVLFQFDSSSIAPSERAKLDQVASFLKGADRVGIVLEGHCDWR---GTQEYNLALGDRR 114

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-SANRRIDILVED 340
           A S    L   GV+   +  +S     +    +     +  R++++L+  
Sbjct: 115 AKSVENYLSTLGVNASVMQTLS-QGDLQATEGASSAQMAKERKVELLIIR 163


>gi|282880889|ref|ZP_06289582.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305271|gb|EFA97338.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 367

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 30/183 (16%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
             T    +I       +  L+ +   A     RL+D+        +  V   +   V   
Sbjct: 210 DKTPDVDAIKALSQSQIDALNAQLNDANAENARLKDMLANQKPVETPAVKKFVTTPVSVF 269

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
                  I                    + +V +Q + +    +   + + G+ D+    
Sbjct: 270 FKLDKTNI-----------------ASQKDLVNVQAVAKYAKENNCKLEVNGYADS--AT 310

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRID 335
                N  LS +RA +    L+K GVS D I+   G                 S NRR  
Sbjct: 311 GKPAHNQWLSEERAKTVANELVKMGVSRDNITT-KGNGGVDDLSPI-------SFNRRAT 362

Query: 336 ILV 338
           + V
Sbjct: 363 VKV 365


>gi|332666720|ref|YP_004449508.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335534|gb|AEE52635.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 508

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 26/254 (10%)

Query: 90  PERSSQNKIDLSIDEHIT---KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           P     N ID  I++  T   K+     +     +         +     +  S+     
Sbjct: 258 PLDGVLNSIDDKINQRTTGLIKDEDGDGVLDAIDQDPNTPAGAMVDTKGRTLDSDRDGVP 317

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
              D E       +  +++           P        +  ++  + + + + +     
Sbjct: 318 DHIDKEPFYMPQPNEKVDEQGVVTNPQPGSPGRPGGPGGVTEERVKELIDQALQNYQIAD 377

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
              N  +  L                    F  S+++        L  +G +L  +  + 
Sbjct: 378 NRSNAAEWFLPMLH----------------FPSSTAVIKYSDYGNLAGVGRMLKANPSIR 421

Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324
             + G TD++        N +LS DRA +  + LM   G++  R   +         + +
Sbjct: 422 LVVTGFTDST---GSESINNQLSYDRAKNVIEHLMNNHGIARGRFV-LQWKGSADNLVPT 477

Query: 325 DPMNSANRRIDILV 338
                 NRR +  +
Sbjct: 478 SSSY-MNRRAEFRI 490


>gi|260901886|ref|ZP_05910281.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
 gi|308108170|gb|EFO45710.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
          Length = 1580

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 22/196 (11%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           K      + NK+ +       +     + +    +         L   + D   +     
Sbjct: 531 KKAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEDKLEQALKD--ARDQSGN 588

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-----VLAHSTE-VISIRGHT 272
                ++ S         F  +S     +    + K        VL       + I GH 
Sbjct: 589 QIDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLANVLEDEPNLRVEIEGHA 648

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------I 322
                    + N ++S +RA  A ++LMK   V + R+  I+ F   +            
Sbjct: 649 CQV---GTEKANMQVSAERAEYAKKLLMKEFPVFDGRV-SIAAFGESKPVYVPKQGEKVD 704

Query: 323 ASDPMNSANRRIDILV 338
            ++P    NRR+ I +
Sbjct: 705 RNNPNLRQNRRVVIRI 720


>gi|196230730|ref|ZP_03129591.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus
           Ellin428]
 gi|196225071|gb|EDY19580.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus
           Ellin428]
          Length = 326

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 66/252 (26%), Gaps = 19/252 (7%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
              +      S +   T      +   T                  +++       +   
Sbjct: 83  SPGNAVATTTSSELPATPEPTVARTEPTPATPVPA-TPEPSTPNPATRRVAMPPPPVATP 141

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
             K               +  +     +        +  +  + +  +I +       + 
Sbjct: 142 MAKAPPAPPPVPATTPAPENASASTATIPPLVENKEENSEVKKQVLARIDAMPHLSPTNR 201

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK------IGEVLAHSTE 264
                  +       ++I        F+     P P  +  L           +L+  T 
Sbjct: 202 TKLYTAVDHAHGMYKLAI------ISFESGRIAPTPAAVAQLTDGLHTSDAQRLLSDPTA 255

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
           VI + G+ D+   +   + N ++S+DRA    + L   G   + +  + G     +    
Sbjct: 256 VIIVLGYADS---KGDDKRNLQISIDRADGLVRALRDQGKILNVMHAV-GMGSSEMFGKG 311

Query: 325 DPMNSANRRIDI 336
                 NR ++I
Sbjct: 312 --QRDKNRVVEI 321


>gi|312887292|ref|ZP_07746895.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311300250|gb|EFQ77316.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 643

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 35/109 (32%), Gaps = 12/109 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           R + +FD   +         L             + I GHTD          N +LS +R
Sbjct: 529 RFSILFDFDRANSTAAYTKFLSNTVASSITDGATVIIHGHTD---IIGEEDHNLKLSQER 585

Query: 292 AYSAY----QVLMKSGVSEDRISKISGFAH---HRLKIASDPMNS-ANR 332
           A        + L K+G +  +   I GF     H     + P     NR
Sbjct: 586 AREVQSILERALAKAGKNSVKFETI-GFGEDVSHSPFDNNLPEERFYNR 633


>gi|325523985|gb|EGD02181.1| putative OmpA family membrane protein [Burkholderia sp. TJI49]
          Length = 50

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
             L++ GV+  R+S   G         +      + NRR++I +   Q
Sbjct: 1   NALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 47


>gi|300773379|ref|ZP_07083248.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759550|gb|EFK56377.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 394

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            ++ L  L ++++     +  ++  + +      T   +  +++       F   +S   
Sbjct: 243 DEEELNALRRRVNELAANNDALSKQLEEAGNKSMTNVIVNKNLLAAPILVTFKIGNSEVS 302

Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
            ET V L    +V+    +     I G+ D          N RLS+ RA +   +L+   
Sbjct: 303 NETRVNLGFFAKVIREGDQQVVYRITGYAD--KGTGTPEINQRLSMARAEAVKNILVNEF 360

Query: 303 GVSEDRISKISGFA 316
            V   +++ ++   
Sbjct: 361 AVPARQLATVAAGG 374


>gi|168333865|ref|ZP_02692108.1| hypothetical protein Epulo_03110 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 229

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 48/178 (26%), Gaps = 22/178 (12%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             +   + ++      + S ++  +       +           +I       +F+   +
Sbjct: 48  DQSTDEQSKVIASYXLVKSEINDDLMRAFGDQLEMLNMEITSGSTIXFDSPEVLFETGQA 107

Query: 243 IPLPET--------IVVLQKIGEVLAHSTEVISIRGHTDASP-----FRNIARDNWRLSL 289
                          + L  I        + I I GHT               +N  LS 
Sbjct: 108 ALNDTFKSILDKFFPIYLDLIYNNYKEVIKEIRIEGHTSTEWGNQIDVNKAYFNNMELSQ 167

Query: 290 DRAYSAYQVLMKS-GVSEDR-----ISKISGFAHHRLKIASDPM---NSANRRIDILV 338
           DR     + ++     +  R         +G +  R  I        +  +RR++  +
Sbjct: 168 DRTREVLEYVINLPSSAPYRDWLIANMTANGLSSSRPIIDPKTGLEDHIKSRRVEFKI 225


>gi|114563549|ref|YP_751062.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334842|gb|ABI72224.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 163

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+ +S     +    +  +   LA++++  ++++G TD    +   + N  L+  RA
Sbjct: 56  PVYFEVNSDKSYSKLDTHMSCVATYLANNSDKELNVQGFTDD---KGTVKYNKALAQRRA 112

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
               + L+  G S D++   +          +    S  RR++  + ++
Sbjct: 113 DGLVEFLISLGTSNDQLISTTKVIEDNGVKLTSSERSKTRRVNFSITNK 161


>gi|29347201|ref|NP_810704.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|29339100|gb|AAO76898.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482]
          Length = 396

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           +    F  +S+    +    +  + E +  +    +++ G+ D          N +LS  
Sbjct: 294 KQNVFFALNSARIQTDQQSKIAALVEYMEKNPAAKVNVTGYADKE--TGNPVINLKLSEA 351

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
           RA +  + L   G+S DRI  I       +             R+ I +
Sbjct: 352 RAKNVAEALKAKGISSDRI-AIDFKGDTVQPYST-----PKENRVSICI 394


>gi|93005424|ref|YP_579861.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
 gi|92393102|gb|ABE74377.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
          Length = 232

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 18/142 (12%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           N  +GV+ +     + +S+I      +   F+++S+    + +  ++K+ E +  + E++
Sbjct: 62  NTPEGVMTDEYGCPVAVSLIGYLTMELRVFFERNSNELQTKYLPEVEKVAEKMHSNPELV 121

Query: 267 SI-RGHTD---ASPFRNIARD--NWR------LSLDRAYSAYQVLMKSGVSEDRISKISG 314
            +  GHT    A+          N        L  DRA      L+K  ++ D+I     
Sbjct: 122 VVLSGHTSELEAAHASGDIYGEMNQEKVDKRQLGRDRAQIIKTALVKRNIATDKIYTFD- 180

Query: 315 FAHHRLKIASDPMNSA--NRRI 334
            A       +D       N+RI
Sbjct: 181 CADSMPIAPNDTEEGRSMNQRI 202


>gi|256821499|ref|YP_003145462.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
 gi|256795038|gb|ACV25694.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
          Length = 459

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 16/161 (9%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           ++  A    +    ++ K++        +   + +   T    + I+         FD+ 
Sbjct: 310 QQDQAQSVVENTGLISLKVNDATIRFNRNYPPRYLNMITDSKRLSITFH-------FDEG 362

Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
           +     +  + +Q++ + +  +  E + + G T  S      +D+   S   A    + L
Sbjct: 363 TDELDNKAKLDIQRLVKYVEQNQLEDLFLFGFTYESGTEETDKDD---SKRLARIIAREL 419

Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338
            K+GV       + GF       ++   N  N  RR+++ V
Sbjct: 420 EKAGVKP---FYVQGFGSKGAIASNSTENGRNKNRRVEVWV 457


>gi|332830050|gb|EGK02678.1| hypothetical protein HMPREF9455_00928 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 222

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
            +   F  +  +  P     ++     L  +    + + G+ D       A  N RLS +
Sbjct: 117 PDPVFFRINKWVIDPTEWSKIELAVNYLNANAGSTVVVTGYADKK--TGNAAINLRLSKE 174

Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHH-RLKI-ASDPMNS 329
           R+ +  + L +  G+S++RI  ++      +     +D   +
Sbjct: 175 RSNAVAKALEEKYGISKNRI-SVNWKGDGLQPFELDNDKNRA 215


>gi|193213926|ref|YP_001995125.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087403|gb|ACF12678.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 702

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 4/53 (7%)

Query: 288 SLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337
           S +RA +  + L+    +   RI  + G+   R           + NR + I+
Sbjct: 105 SEERALAIQRFLIYTHNIDPSRIQTV-GYGSARPLTVEKTAADKARNRAVTIV 156


>gi|325270710|ref|ZP_08137305.1| hypothetical protein HMPREF9141_2515 [Prevotella multiformis DSM
           16608]
 gi|324986956|gb|EGC18944.1| hypothetical protein HMPREF9141_2515 [Prevotella multiformis DSM
           16608]
          Length = 472

 Score = 53.0 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 41/169 (24%), Gaps = 22/169 (13%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              +             ++R +    ++   L+             + +           
Sbjct: 321 QRDVATEKARAEREAADRQRAEQQQAELQRRLTDCEERQAESPATVQPSHF--------- 371

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
                F  +SS    E    L+     +      +     T           N +LS  R
Sbjct: 372 ---VQFAHNSSYMSREEAEHLKAFARSVRGHRLTLVAEAST-----PGADGYNQQLSERR 423

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
                + L++ G     +   +          +    +  RR+ I VE 
Sbjct: 424 LARVAEALVREGFDRADLHPQTAIGER-----NGKPAAEGRRVTIKVEK 467


>gi|282877597|ref|ZP_06286412.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281300169|gb|EFA92523.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 383

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 59/156 (37%), Gaps = 12/156 (7%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
            +     E +     ++  +     +  +L +  ++IS     L      K V  +    
Sbjct: 214 AQLRDQAEIDGLNAQINSLRSDLNGKDAQLSNKDRQISDLQKALEECKNKKPVYVKPA-- 271

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281
               +  + + T +F    S+     +  ++ I + + +  +  I+I+G+         A
Sbjct: 272 ----TATNLQPTVLFRVGQSVVDRSQMPNVEMIAKYMKNHKDSKITIKGYASPE---GPA 324

Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
             N RLS +RA +   +L+ K  ++  R+  + G  
Sbjct: 325 ELNQRLSENRAKNVKNLLVDKYKIAPSRL-TVVGMG 359


>gi|264680074|ref|YP_003279983.1| cytochrome C oxidase subunit II [Comamonas testosteroni CNB-2]
 gi|262210589|gb|ACY34687.1| cytochrome c oxidase, subunit II [Comamonas testosteroni CNB-2]
          Length = 524

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+   S+   +    +++  E   AH    I++ G  D++     A  N  L+ +RA
Sbjct: 424 QVFFETGKSVLDDKAQAAVKRAAEYWSAHKDGKIALSGFVDST---GNADKNAELAKERA 480

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
            +  ++L  SG++ DRI         +     A+   +   RR+DI 
Sbjct: 481 KAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 521


>gi|153872134|ref|ZP_02001113.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152071400|gb|EDN68887.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 386

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 89/294 (30%), Gaps = 21/294 (7%)

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
           +  K + ++++      +   +K I         SS      +         +  K+   
Sbjct: 101 ESKKSSAKKHYQISASIVDLTTKTIVTNGTVWIVSSGLDYKPTASYEDNPMYIKGKLIEY 160

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178
             K     +   + +  +    E   +  T+D    +   +  + + + +         +
Sbjct: 161 LLKTVQSPVGTQVDFKHSKDSKEDKADKDTKDFNFIEIKARLVEAQTAYDNGNYEQARLM 220

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            KE +     +   + +        + +   ++ +          + +         +F 
Sbjct: 221 FKEIL----NQPDGKIIEAYGGLYATNIKLGSLEEAEQNFGNMVAVAVETRSLPIKFLFQ 276

Query: 239 KSS------SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291
                         +  + L+++G    +      +I GHT       I   N  LS  R
Sbjct: 277 SQMRDLLEVPTLRQQYAIWLRQMGLYFKNHPNHCVNIIGHTSQY---GIYDFNKELSKRR 333

Query: 292 AYSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVED 340
           A     ++ +  SG+ E   S   G       + + P ++ N   RR++  + D
Sbjct: 334 AERIQFIMAQTFSGIFEH--SSTIGKGPDETIVGTVPDSAENAIDRRVEFQITD 385


>gi|228471204|ref|ZP_04056017.1| OmpA family protein [Porphyromonas uenonis 60-3]
 gi|228307019|gb|EEK16101.1| OmpA family protein [Porphyromonas uenonis 60-3]
          Length = 338

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 9/224 (4%)

Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172
           +K       +   +    I +           N +     +G  +    D  K++  E  
Sbjct: 118 MKASVPTFAQPAMQAGQPISWGGQLYYPAGSSNLVVTQGAQGAPVANDADKIKALEDELA 177

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                    +    +  ++L  L ++I           +               + +   
Sbjct: 178 RLKEAQQNPQRNDDQIAQQLAALRQQIDELEKAPAQAPVYNYDNRRVIHQDRSRNNVQLS 237

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +  F  +S +   E +  ++ + +  +     ++ + G+            N RL+  R
Sbjct: 238 RSVFFKVNSDVLNAEGLEAVRNVADFVIGDPRALVLVYGYAS---IDGPVAFNNRLAAKR 294

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335
           A S  + L  +GV    I +            +D      RR+D
Sbjct: 295 AASVIKALQAAGVPAAAIKRYDNGVDTTPSKRTDA-----RRVD 333


>gi|283781950|ref|YP_003372705.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283440403|gb|ADB18845.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
          Length = 333

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/315 (8%), Positives = 85/315 (26%), Gaps = 32/315 (10%)

Query: 45  MAFFLVMWIIN---ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101
              F++ ++     +  +   + ++   +     L          ++      Q   +  
Sbjct: 19  FVTFVLAFLFAAGCSAPNAQLQQVQLEKDQLIAALKAERDAATAAKSRLATVEQRLDEAE 78

Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161
               +  +       S+     +               +       T+   + K + +  
Sbjct: 79  KQLAMGGSRGVTSTASSRSSSGFSAASRPASSSPAKPGAMQPLPPPTKPKPESKPIGEPL 138

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISSTLSGLVADNIVKGVLFET 219
           +                 ++        + + +  L   ++     L  D+  +  + E 
Sbjct: 139 EWRSLDKTPIRPPASGAVRQSSYEDFVSEEVTEPSLLYAVAQRDRRLRFDDATRSAVVEM 198

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASP 276
                           +F+  +++   E    L ++  +L +       + + G     P
Sbjct: 199 P--------------ILFEAGTAVLTAEGRESLDELSRLLRNDNLKKTKVLVAGIATGRP 244

Query: 277 -------FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH--RLKIASDPM 327
                            L   RA +    L + GVSE+R+  ++G            +  
Sbjct: 245 SQQAGQSTTARYSSARALGTARAQAVADYLDRHGVSENRL-AVTGSGERGDAPLAKIEQP 303

Query: 328 NSANRRIDILVEDRQ 342
            +  R ++I + + +
Sbjct: 304 GTQVRGVEIHLLESE 318


>gi|282881743|ref|ZP_06290406.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304502|gb|EFA96599.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 382

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 13/134 (9%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           +  +L D  ++IS     L   N  K  +   T T +  ++       +F +  S+    
Sbjct: 239 KNAQLTDKDRQISDLQKALDDCNKRKAYVKPATATNLQPTV-------LFRQGQSVVDRS 291

Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVS 305
            +  ++ I   + +     ++I+G+            N RLS +RA +   +L+ K  ++
Sbjct: 292 QMPNIELIANYMKNHKSATVTIKGYASPE---GPTELNQRLSENRAKNVKNLLVDKYRIA 348

Query: 306 EDRISKISGFAHHR 319
            +R+  + G     
Sbjct: 349 PNRLKTV-GMGETN 361


>gi|126729352|ref|ZP_01745166.1| OmpA/MotB [Sagittula stellata E-37]
 gi|126710342|gb|EBA09394.1| OmpA/MotB [Sagittula stellata E-37]
          Length = 155

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F + +S+   E   +   +   L    + + I GHT  +     A  N  LS  RA  A 
Sbjct: 49  FSRGTSLANGEEERLRGVLASALPDDRKHVVIVGHTGTT---GDADANLELSEKRAQVAA 105

Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNS-ANR--RIDILVEDRQ 342
           Q+    G+ +DR+  ++G            +   +  +R  R+D+ V+ R+
Sbjct: 106 QIARAMGLPDDRL-TVTGIGGSAPLPQDDGESDRAHQSRMARVDVTVQVRR 155


>gi|89073110|ref|ZP_01159649.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34]
 gi|89051063|gb|EAR56520.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34]
          Length = 336

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +         L ++   +  + E    I G  D       A+ N ++S +RA +    
Sbjct: 238 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAKINEKVSAERAANVANY 294

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339
           L  +G+   R+  +S   ++     +D     N   R + I+++
Sbjct: 295 LEANGIDASRL-TVSSVGYNNPL-KTDTSTKTNYVQRSVQIILK 336


>gi|148653764|ref|YP_001280857.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148572848|gb|ABQ94907.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
          Length = 213

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            + +    +   + E       +  + D+  +  +T   +V D              +  
Sbjct: 27  TSTDSPKQIVTTAIEASQLDSDEDGVPDINDECPNTPQNMVVDPNGCPASLLPKEGSVRA 86

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDN 284
                     +D +SS    +    L +  + +    +  + I  H      R      +
Sbjct: 87  EFR-----AFYDTNSSEIKSKYREELDRWAKKMDEYPDAYMLIEAHISEPEARLEENASH 141

Query: 285 WRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334
             L+L R       L+ K  +  +RI   + ++  R    +D       N+R+
Sbjct: 142 QTLALSRVEGIKNYLIQKHNIDPNRIRTYT-YSAERPIAPNDDAEGIKLNQRV 193


>gi|284005612|ref|YP_003391432.1| hypothetical protein Slin_6677 [Spirosoma linguale DSM 74]
 gi|283820796|gb|ADB42633.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
          Length = 222

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +  +++D+  KI + L    +    +          + I   D     +FD    +P 
Sbjct: 35  QNKVGQVEDVKAKIYTDLKAEFSQVATQW--NLEINNDLSIRFKDAD--GLFDGGKGVPT 90

Query: 246 PETIVVLQKI-GEVLA--------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            + + +L +   + LA         S E + + GHT         +    LS  RA +  
Sbjct: 91  GKFVNILNQFIPKYLAIISKPEYVKSIEEVRVEGHT----ASGDYQQTIELSQQRANNVL 146

Query: 297 QVLMKS------GVSEDR----ISKISGFAHHRLKIAS--------DPMNSANRRIDILV 338
             L+K            R    I   SG+   R   A            +  +RR++  +
Sbjct: 147 YYLVKHPSFFRLNQESQRHLQYILTTSGYGWSRALDADGKYSKITRKQYDVQSRRVEFRI 206


>gi|197124507|ref|YP_002136458.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
 gi|196174356|gb|ACG75329.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
          Length = 357

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            +    DA+P         RLS   A +A   L + GV+E R+S + G+   R  + +  
Sbjct: 284 RVEAFVDATPDAQAD---QRLSQAMADAAIGRLRELGVAERRLSGV-GYGGERPLLPNFT 339

Query: 327 MNSA--NRRIDIL 337
           +     NRR++I+
Sbjct: 340 VRGRTANRRLEIV 352


>gi|162450403|ref|YP_001612770.1| hypothetical protein sce2131 [Sorangium cellulosum 'So ce 56']
 gi|161160985|emb|CAN92290.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 327

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 84/280 (30%), Gaps = 23/280 (8%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
              L  +       +   E S    +  +         V   + +     +++       
Sbjct: 9   KVQLPVSGVAEVSAKRRAEASPPRALRAAFAGRGLAALVASALLAGCGYTEFEWQAQLDR 68

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
                ++    +  + +  E+G     + D   +        + P + +        +  
Sbjct: 69  SERLQRELVASQARVRQLEEQGPRGGAAADPHWANGPSSGLDVEPGATQPRGEPAGARPA 128

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            +    +      +        V        ++ISI    +  +F  +     P    VL
Sbjct: 129 SERDSDVLRAFLPV----AAGDVTVAPRDGRVVISI---PSRVLFKGNRDALSPAGEKVL 181

Query: 253 QKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGVS 305
           + I  ++  +         + GHT +       R+ W +++ +A +    L    ++GV 
Sbjct: 182 RDIAAIIRSNEPLKGLAYQVVGHTASGTPGVAWRNGWDVTVAQARAVLLFLAQPKEAGVP 241

Query: 306 EDRISKISGFAHHRLK-----IASDPMNSANRRIDILVED 340
             R+S  S FA            + P      R++I++E 
Sbjct: 242 LARLSLAS-FADLPPADAGGGAPAQPQEP---RVEIVIEG 277


>gi|121605878|ref|YP_983207.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120594847|gb|ABM38286.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 179

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 19/119 (15%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + +        F    +         L  + +  A +   + I G  DA+     A  N 
Sbjct: 75  VKVEQGVVKFYFASGKADLAAGASEALTDVVKG-AQAGRKLVISGFHDAT---GNAAQNA 130

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRI-----SKISGFAHHRLKIASDPMNSANRRIDILVE 339
            L+  RA +    L  +GV+E +I      +I+G         +       RR++I ++
Sbjct: 131 ELAKQRALAVRDALTAAGVAEGQIELKKPEQITGSG------PNAEA----RRVEISLQ 179


>gi|254785203|ref|YP_003072631.1| hypothetical protein TERTU_1036 [Teredinibacter turnerae T7901]
 gi|237686899|gb|ACR14163.1| conserved hypothetical OmpA family protein [Teredinibacter turnerae
           T7901]
          Length = 238

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 10/207 (4%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           + S  +    ++ T     G     +     +      +             K  +R + 
Sbjct: 27  AASSATPSDVSATTAAKSAGIFTTATIVGGVAGGPVGFFLGALSGAYLGEQNKNHERNKT 86

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
             K+  ++L+    +  ++  +    +  +   I        F         +    +Q 
Sbjct: 87  ALKEAETSLTSSRNEVAMQQRVIAKMQKQVEQPI---EFLVYFPTGEDALSHQDSQRIQS 143

Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-KI 312
           +   +  +    + + G  D          N  LS +RA S    L+  G+   RI  + 
Sbjct: 144 LANYMTDNPSLRVRLDGFADPR---GTDEYNNVLSEERARSVVDALVARGIDSRRIEYQA 200

Query: 313 SGFAHHRLKIASDPMNSANR--RIDIL 337
            G +            +  R  RI++ 
Sbjct: 201 HGASMSMATAGDKDAYALERKVRIEVY 227


>gi|167622471|ref|YP_001672765.1| OmpA domain-containing protein [Shewanella halifaxensis HAW-EB4]
 gi|167352493|gb|ABZ75106.1| OmpA domain protein transmembrane region-containing protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 346

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 5/118 (4%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           I         +F   SS         L ++ ++      +VI + G +D       ++ N
Sbjct: 228 IHTEKSSVAVLFSFDSSELTSAAKAKLDQVIQLSKSKDQDVILLNGQSDNQ---GDSQYN 284

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +LS  R       L+  GV   +I                   +  RR+ + +  ++
Sbjct: 285 LKLSEKRVQHVEAYLVSHGVEVKKIDT-QAVGEQDAHANLRKDRALERRVIVTLTSQE 341


>gi|300778953|ref|ZP_07088811.1| OmpA/MotB family protein [Chryseobacterium gleum ATCC 35910]
 gi|300504463|gb|EFK35603.1| OmpA/MotB family protein [Chryseobacterium gleum ATCC 35910]
          Length = 443

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 9/107 (8%)

Query: 231 QRNTPMFDKSS-SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288
             +   F   S +     +   L  +  +L    +  I I G+TD +        N +LS
Sbjct: 333 DFDHVNFKMGSSTELEAGSQGQLDNLVAILKAFPDAKIKIGGYTDKT---GNEASNVKLS 389

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANR 332
             RA      L K+GV   ++    G+     K+    SD   +A+R
Sbjct: 390 QARADYIKSALAKAGV-GGQVLGAEGYGSKFAKVDAKASDAERAADR 435


>gi|189911990|ref|YP_001963545.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167776666|gb|ABZ94967.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
          Length = 159

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 9/147 (6%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L   +   L         +GV+FE               T  F K S++     +V LQ 
Sbjct: 15  LTYTVQYFLRPNFDLLAEEGVIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQT 74

Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
           + + L  +        H DA         +N  +S  R+    + L+   V  ++I ++ 
Sbjct: 75  VADFLNRNRNY---EIHIDAHAVEGKNNEENIMISEKRSLEVERFLLIHFVEPNQIRRLF 131

Query: 314 GFAHHRLKIASDPMN--SANRRIDILV 338
            + + +    +      + NRR++I +
Sbjct: 132 -YGNTK--SPNQTKEHEALNRRVEIQL 155


>gi|170699781|ref|ZP_02890814.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria IOP40-10]
 gi|170135308|gb|EDT03603.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria IOP40-10]
          Length = 535

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 19/165 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L  +++   +  K  +D A   +   +         G   ++             +T  F
Sbjct: 380 LQPKQVADARNGKMPEDTAGAAAPAEAASAPAQAASGAADQSAAASAAAPASTALSTIYF 439

Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +   S +P      +        AH    +++ G TD +     A  N  L+  RA +  
Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAVR 496

Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
             L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531


>gi|46398703|gb|AAS92037.1| IcmN protein [Legionella pneumophila]
          Length = 165

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 26  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 82

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 83  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 138

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 139 KPITSYTLGGD--RSPNARVEITFRR 162


>gi|46398701|gb|AAS92036.1| IcmN protein [Legionella pneumophila]
          Length = 170

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 31  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 87

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 88  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 143

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 144 KPITSYTLGGD--RSPNARVEITFRR 167


>gi|46398707|gb|AAS92039.1| IcmN protein [Legionella pneumophila]
          Length = 168

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 29  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 85

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 86  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 141

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 142 KPITSYTLGGD--RSPNARVEITFRR 165


>gi|46398699|gb|AAS92035.1| IcmN protein [Legionella pneumophila]
          Length = 166

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 27  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 83

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 84  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 139

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 140 KPITSYTLGGD--RSPNARVEITFRR 163


>gi|46398691|gb|AAS92031.1| IcmN protein [Legionella pneumophila]
          Length = 189

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 50  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186


>gi|46398709|gb|AAS92040.1| IcmN protein [Legionella pneumophila]
          Length = 175

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 36  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 92

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 93  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 148

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 149 KPITSYTLGGD--RSPNARVEITFRR 172


>gi|54293440|ref|YP_125855.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
 gi|53753272|emb|CAH14719.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
          Length = 189

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 50  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186


>gi|28898164|ref|NP_797769.1| hypothetical protein VP1390 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260366463|ref|ZP_05778902.1| OmpA family protein [Vibrio parahaemolyticus K5030]
 gi|260878509|ref|ZP_05890864.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
 gi|260897090|ref|ZP_05905586.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|28806378|dbj|BAC59653.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087682|gb|EFO37377.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
 gi|308091128|gb|EFO40823.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
 gi|308113073|gb|EFO50613.1| OmpA family protein [Vibrio parahaemolyticus K5030]
          Length = 1580

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 22/195 (11%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
                 + NK+ +       +     + +    +         L   + D   +      
Sbjct: 532 KAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEDKLEQALKD--ARDQSGNQ 589

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-----VLAHSTE-VISIRGHTD 273
               ++ S         F  +S     +    + K        VL       + I GH  
Sbjct: 590 IDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLANVLEDEPNLRVEIEGHAC 649

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------IA 323
                   + N ++S +RA  A ++LMK   V + R+  I+ F   +             
Sbjct: 650 QV---GTEKANMQVSAERAEYAKKLLMKEFPVFDGRV-SIAAFGESKPVYVPKQGEKVDR 705

Query: 324 SDPMNSANRRIDILV 338
           ++P    NRR+ I +
Sbjct: 706 NNPNLRQNRRVVIRI 720


>gi|52840692|ref|YP_094491.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|148360936|ref|YP_001252143.1| hypothetical protein LPC_2896 [Legionella pneumophila str. Corby]
 gi|296105998|ref|YP_003617698.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
 gi|2897615|emb|CAA75327.1| LphA protein [Legionella pneumophila]
 gi|52627803|gb|AAU26544.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|148282709|gb|ABQ56797.1| LphA (DotK) [Legionella pneumophila str. Corby]
 gi|295647899|gb|ADG23746.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
 gi|307609255|emb|CBW98722.1| Dot/Icm secretion system protein [Legionella pneumophila 130b]
          Length = 189

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 50  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186


>gi|54296482|ref|YP_122851.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
 gi|53750267|emb|CAH11661.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
          Length = 189

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L ++   L
Sbjct: 50  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEVAAFL 106

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186


>gi|329895780|ref|ZP_08271156.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
 gi|328922142|gb|EGG29499.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
          Length = 44

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
           +++  G++E R   ++GFA       ++       NRR++I++++
Sbjct: 1   MIINQGLAELRF-SVTGFADTEPVDTNETPASRQRNRRVEIIIDN 44


>gi|156124986|gb|ABU50810.1| putative antigen [Acinetobacter venetianus]
          Length = 262

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 15/109 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD+S++  + ++   +  I E +  S     I++ G  D          N +LS  RA +
Sbjct: 154 FDRSNANAIEQSSSSVAAIAERIKQSNSTGPITVAGFADPL---GKFSYNHQLSAQRANT 210

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN------SANRRI 334
             ++L+  G+  +RI +I   +   L      +   N      + NRR+
Sbjct: 211 VAKLLVNEGIDVNRI-QIQANSQTDLYQQCAGNKTNNRLVGCLAPNRRV 258


>gi|148257384|ref|YP_001241969.1| hypothetical protein BBta_6138 [Bradyrhizobium sp. BTAi1]
 gi|146409557|gb|ABQ38063.1| hypothetical protein BBta_6138 [Bradyrhizobium sp. BTAi1]
          Length = 268

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 62/237 (26%), Gaps = 11/237 (4%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
             +P      +    +  E  T    +  +           L   +      Q       
Sbjct: 9   GSSPLPHGMPSSSAAARFEPCTVAGEEAPVWLAAAFAVAGVLIAIMSAALWQQSLARTPE 68

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                             E++          P  +     +            IS     
Sbjct: 69  VAASAPPAVTQAPMPAPAERTPEPMLKPPETPSPEPLQTPVTIAAPAAAPEPVISVPSPT 128

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGEVLAHSTE 264
            VA             T           +  F++ S+ P P +    L  +   LA   +
Sbjct: 129 PVAALPEPATAARKAATE-----CFAPLSIAFERGSTRPNPADVKRSLPILQSALARHGD 183

Query: 265 VIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-KISGFAHHR 319
               + GHTDA         N  LS  RA +  ++L + G++  RI+ + +G    R
Sbjct: 184 AAVLVEGHTDA---SGSEDLNVLLSYSRAKAVAELLKRDGIAAHRITVRAAGAGEAR 237


>gi|295105094|emb|CBL02638.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Faecalibacterium prausnitzii SL3/3]
          Length = 392

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 231 QRNTPMFDKSSSIPLPETIVV--LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
                 F   S+  L E      L  + E L  ++    I   + A            LS
Sbjct: 268 SAEQVAFQPDSTAFLDEAAARAALNGLAEQLKGTSAAHYIVAGSTAQVDNASREGAQALS 327

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332
           L RA +   VL+++GV  DR     G   +            NR
Sbjct: 328 LARAQAVRDVLVEAGVPADRF-TCLGLG-NEPTSVRSANEPENR 369


>gi|290953318|ref|ZP_06557939.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313451|ref|ZP_06804053.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 108

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           +AH  + I + G+TD        + N+ L   RA + Y  L+   V++D+I  +S +   
Sbjct: 3   IAHPDQPIKLSGNTDPR---GSEKYNFNLGQKRAEAVYNYLLGKNVNKDQICVVS-YGKL 58

Query: 319 RLKI 322
           +   
Sbjct: 59  KPAA 62


>gi|46398711|gb|AAS92041.1| IcmN protein [Legionella pneumophila]
          Length = 165

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +      ISI     + +F   S      +  +L +I   L
Sbjct: 26  DATIIKMMTDLNKKGIKVASVGQNYXISI---PASALFADQSPRLNWASYSLLNEIAAFL 82

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 83  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 138

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 139 KPITSYTLGGD--RSPNARVEITFRR 162


>gi|119900062|ref|YP_935275.1| hypothetical protein azo3773 [Azoarcus sp. BH72]
 gi|119672475|emb|CAL96389.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 392

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%)

Query: 90  PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149
             +S+      ++D+  T+   +      ++  +            N+        S   
Sbjct: 146 IAQSAVPVQRAAVDQTPTRFFAESPSMVKDRVTEGYLKTAETPAGGNADPVYLGSVSTAA 205

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
              +  +   +   EK++         P   +  +          L +  ++        
Sbjct: 206 VLAEALEAYNAEQWEKALTYYTEAASRPDGAQLRVFNGIYLANVQLGRHEAAE------Q 259

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
              + V        + + I+    +  F            + +++I          ++I 
Sbjct: 260 AFGRIVALGLATDNLAVRILFNPGSTDF-WRDQRVSGAYPMWIRQIARETQAGGYCLTIV 318

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDPMN 328
           GHT  +        N RLSL RA     +L++  V       +I G    +  + S   +
Sbjct: 319 GHTSRT---GAENVNARLSLARARVMRDLLLRE-VPALSTALRIDGKGSSQNIVGSGTDD 374

Query: 329 SA---NRRIDI 336
                +RR++ 
Sbjct: 375 VRDSLDRRVEF 385


>gi|299534095|ref|ZP_07047447.1| cytochrome c oxidase, subunit II [Comamonas testosteroni S44]
 gi|298718004|gb|EFI59009.1| cytochrome c oxidase, subunit II [Comamonas testosteroni S44]
          Length = 503

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 12/109 (11%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                F+   S+   +    ++K  E   AH    I++ G  D++     A  N  L+ +
Sbjct: 401 PYQVFFETGKSVLDDKAQAAVKKAAEYWSAHKDGKIALSGFVDST---GNADKNAELAKE 457

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
           RA +  ++L  SG++ DRI         +     A+   +   RR+DI 
Sbjct: 458 RAKAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 500


>gi|46398693|gb|AAS92032.1| IcmN protein [Legionella pneumophila]
          Length = 145

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 6   DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 62

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 63  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 118

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 119 KPITSYTLGGD--RSPNARVEITFRR 142


>gi|325281084|ref|YP_004253626.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324312893|gb|ADY33446.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 367

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290
           R    F  +SS+ L      +  +   +   TE   +  G+ D        R N  LS  
Sbjct: 263 RQDIFFALNSSVILASETAKIDSLVAFMKTHTETQVVITGYADVQ--TGNPRYNKVLSQR 320

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVEDRQ 342
           RA     +L  +G+S +RI  +       +      P+   N R+ I +  ++
Sbjct: 321 RAEQVAVLLTVNGISRERI-TVFAKGDTEQPF----PVMEQN-RVAICLIGKK 367


>gi|325525379|gb|EGD03214.1| cytochrome c oxidase, subunit II [Burkholderia sp. TJI49]
          Length = 534

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 438 FETGKSTLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 494

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 495 RDALKAAGVAEDHIVLKKPETITGGADAK--------EA--RRVEI 530


>gi|330719881|gb|EGG98362.1| hypothetical protein imdm_109 [gamma proteobacterium IMCC2047]
          Length = 234

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 5/137 (3%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SS 242
             +    +++ +  +++   +     +       E +      ++   +   +F    S 
Sbjct: 64  EQVATADQVESVESELADARAEADLLSRKLAASEEASNDYQQFALQQLQLELLFKTGASE 123

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           + LP  + +      +L     ++ + G+ D       A  N  LS  R     + L+  
Sbjct: 124 LTLPAQLKMSLLASLLLEQPKLMVRLDGYADPR---GDANYNQTLSAKRVQVVQEFLITK 180

Query: 303 GVSEDRISKISGFAHHR 319
           GV+ +R   I      +
Sbjct: 181 GVAPERF-TIHSHGASQ 196


>gi|58616261|ref|YP_195390.1| OmpA family protein [Azoarcus sp. EbN1]
 gi|56315722|emb|CAI10366.1| OmpA family protein [Aromatoleum aromaticum EbN1]
          Length = 201

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 62/218 (28%), Gaps = 22/218 (10%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
           + +  +  L  +       + + +D         +       +            ++ + 
Sbjct: 2   KPQVPLNILLAAAAFIGATSVIAQDRHSVYPFEATEYEPSQFSYGVGQDTATTLIKRPVQ 61

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP- 244
               + ++     + +  +   +D             G  +          F   S++P 
Sbjct: 62  KGETQWVEMERTPLRTASTSAKSDGTGSNTGDYDLIPGATV---------FFAFDSTVPL 112

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            PE I   Q   +        I + G TD          N RL+  RA S   +    G+
Sbjct: 113 NPEVISSFQFGDDT------KIRLIGRTDPI---GTNSYNDRLAYKRAASVASLFKLKGM 163

Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340
            + ++  +S          +D       NR++ I +  
Sbjct: 164 KQSQMELVS-LGARSPIAPTDTESGRQKNRQVLIELRK 200


>gi|83643026|ref|YP_431461.1| phosphate ABC transporter periplasmic protein [Hahella chejuensis
           KCTC 2396]
 gi|83631069|gb|ABC27036.1| ABC-type phosphate transport system, periplasmic component [Hahella
           chejuensis KCTC 2396]
          Length = 460

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 11/131 (8%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHT 272
               +   +  +         F    S    +    L+++ E L  S      + + G  
Sbjct: 334 SVPESFRQLTRNYNRLTVNFRFAAGRSKLDNKAHRDLERLLEYLRESSRSPTDLMLIGFA 393

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330
           D             +S  RA +  + L + G     +  ++G+  ++   A+  +   S 
Sbjct: 394 DK---SGDELRAQMVSELRATAVSRALKERGAE---VKAVTGYGQYKTVGATGGEHGASR 447

Query: 331 NRRIDILVEDR 341
           N R+++ V   
Sbjct: 448 NGRVEVWVRKD 458


>gi|332877840|ref|ZP_08445578.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684135|gb|EGJ56994.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 362

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290
           +    F  +S++        ++++   L  + +   +  G+ D        + N  LSL 
Sbjct: 260 QENVFFKLNSAVIRASEEAKIERLAAYLTANPQAKVVICGYAD--KATGTPKINDALSLK 317

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338
           RA +  + L    +   RI ++       +           N R+ I +
Sbjct: 318 RAQAVSKALQVKKIDAGRI-RVEHKGDSVQPF----TEVEKN-RVSICI 360


>gi|237751010|ref|ZP_04581490.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           bilis ATCC 43879]
 gi|229373455|gb|EEO23846.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           bilis ATCC 43879]
          Length = 222

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 56/183 (30%), Gaps = 24/183 (13%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            L    K+  +  ++ + L +    +   L   +     K +           +I  Q+ 
Sbjct: 12  TLENEKKQLEIQNEKMRDLAENYSNLQQELYKDLMQEFGKDLKKWDAFIDEDTTIRFQKQ 71

Query: 234 TPMFDKSSSIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTD-----ASPFRN 279
             +FD            +L             E      E I I GHT      A     
Sbjct: 72  DILFDVGQKRVKERFQKILDDFFPRYVRILYGEKYRDFIEDIRIEGHTSKDWEGAQSLER 131

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSED-----RISKISGFAHHRLKIASDPMNSANRR 333
               N  LS +RA+   +       +++      ++ + +G +  +   + +     +RR
Sbjct: 132 RYLGNAELSQERAFQVLKYCFSLPSINDKQEWLIKLLRANGVSFAKPLASDE----LSRR 187

Query: 334 IDI 336
           ++ 
Sbjct: 188 VEF 190


>gi|114762079|ref|ZP_01441547.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114545103|gb|EAU48106.1| OmpA domain protein [Roseovarius sp. HTCC2601]
          Length = 517

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 50/165 (30%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +   ++   LA  I           + + V        +  S         F+ 
Sbjct: 360 DQMPEEIALAQQGDRLANAIIVAEGDQGLTGLQRLVATLAPMRRLTTSFR-------FEA 412

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
             +    ++   +Q++   L               S  +  A  N  ++ +RA +    +
Sbjct: 413 GETGLDAQSRSNVQQLARALEAGEYDGRELVFVGFSDAQGPAEANLEIAYERAEAVRAAV 472

Query: 300 MKSGVSED--RI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +  + D  R+   +  F         D +     NRR+++ + 
Sbjct: 473 LNAAEAADLRRLELGVEAFGEAMPMACDDTVWGRQVNRRVEVWLR 517


>gi|320106453|ref|YP_004182043.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
 gi|319924974|gb|ADV82049.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
          Length = 594

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 86/328 (26%), Gaps = 46/328 (14%)

Query: 50  VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           V+++ +              N       TAS G      P  + +    D     +  K 
Sbjct: 237 VVYVGSMETVGVHARAVDADNDALIYAWTASSGTVTGSGPDAQWNY--ADAPAGAYTVKV 294

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
            V+   G T+      ++   + ++     S    +    +           D   ++  
Sbjct: 295 HVEDGKGGTSDCAVDIQVAPKVNHVPVLTCSVDQASVEAGEIVHLTANGSDAD-NDALTY 353

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                   L+        +       +  +   ++     +    +   T  +  +I + 
Sbjct: 354 TWETTGGQLAGSGAAGTLQTPTGAGSSYTVMGHVNDGHGGSADCSLTVTTHPSAAMIKLE 413

Query: 230 DQR--NTPMFDKSSSIPLPETIVVLQKIGEVL------------AHSTEVISIRGHTDAS 275
           ++   ++  F  +          ++    + L            A     + + GH D  
Sbjct: 414 ERLELHSIYFPTAEPTEKEPNRGLVPSQHKTLLSLAADFSEYLKARPDAHLILEGHADPR 473

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR--------------L- 320
                   N +LS  R     + L++ GV E  I +   F                    
Sbjct: 474 ---GSVEYNQKLSGLRVEITKRFLVEHGVPEQSIDQ-KAFGDQHNLSKAQVTDAIEHTPE 529

Query: 321 KIASDPMNSA----------NRRIDILV 338
               D   +           NRR+D+ +
Sbjct: 530 LGPEDRARALRNMTTILLASNRRVDVTL 557


>gi|206559146|ref|YP_002229906.1| putative cytochrome c oxidase [Burkholderia cenocepacia J2315]
 gi|198035183|emb|CAR51057.1| putative cytochrome c oxidase [Burkholderia cenocepacia J2315]
          Length = 524

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 428 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 484

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 485 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 520


>gi|78067645|ref|YP_370414.1| cytochrome c oxidase, subunit II [Burkholderia sp. 383]
 gi|77968390|gb|ABB09770.1| Cytochrome c oxidase, subunit II [Burkholderia sp. 383]
          Length = 531

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD       A  N  L+  RA + 
Sbjct: 435 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKHRAQAV 491

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 492 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 527


>gi|149912029|ref|ZP_01900622.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
 gi|149804890|gb|EDM64925.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
          Length = 293

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 227 SIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDN 284
           S+ D   + + F+ +S     ++ + L  I E L +S ++  +    D+          N
Sbjct: 176 SLDDIAYSVLDFNAASDELTQQSQLRLAMITEFLQYSPDINVVV--VDSYTGSYGDELQN 233

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
            + S  RA +  Q  + +G+    I   +G+       ++        N+R+ I +
Sbjct: 234 LQTSSLRAENIKQYFLDNGLKNLEIQT-NGYGEKSQIASNGNIIERQKNQRVVISL 288


>gi|254247128|ref|ZP_04940449.1| Cytochrome c oxidase, subunit II [Burkholderia cenocepacia PC184]
 gi|124871904|gb|EAY63620.1| Cytochrome c oxidase, subunit II [Burkholderia cenocepacia PC184]
          Length = 532

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528


>gi|107023780|ref|YP_622107.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia AU 1054]
 gi|105893969|gb|ABF77134.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia AU 1054]
          Length = 532

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528


>gi|116690867|ref|YP_836490.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia HI2424]
 gi|116648956|gb|ABK09597.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia HI2424]
          Length = 532

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528


>gi|268315879|ref|YP_003289598.1| PKD domain containing protein [Rhodothermus marinus DSM 4252]
 gi|262333413|gb|ACY47210.1| PKD domain containing protein [Rhodothermus marinus DSM 4252]
          Length = 317

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           + N   FD++SS+        LQ+  ++L       + + G           R+  +LS 
Sbjct: 210 EMNPVFFDRNSSVLNDAARSALQENLQILQDCPNLSVRVEGWA-----APGERNPQQLST 264

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS 313
           DRA +  Q    +G+   RI+ +S
Sbjct: 265 DRARAVEQFYTSNGIPASRITTVS 288


>gi|313205988|ref|YP_004045165.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
 gi|312445304|gb|ADQ81659.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
 gi|315022301|gb|EFT35329.1| OmpA/MotB [Riemerella anatipestifer RA-YM]
 gi|325336572|gb|ADZ12846.1| OmpA4 [Riemerella anatipestifer RA-GD]
          Length = 215

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
             +   F   S+  L      +  + ++L    +  I I G+TD +        N ++S 
Sbjct: 106 DFDHVNFKMGSTNQLESGAEQIDNLAKILKAYPDAKIKIGGYTDKT---GSEETNVKISQ 162

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANR 332
            RA      L K+GV   ++    G+     K+   ASD   +++R
Sbjct: 163 ARAEFIKAQLEKAGVGA-QVVSAEGYGSKFAKVAADASDEERASDR 207


>gi|192360398|ref|YP_001983048.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
           Ueda107]
 gi|190686563|gb|ACE84241.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
           Ueda107]
          Length = 392

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           +  H+D       A  +   S  +A    Q L+  G++  +I+            ++   
Sbjct: 235 VDAHSDKRD---EAEQSMDASRTQAELVSQYLIAKGMNVAQITS-RWHGDKYPAASNATE 290

Query: 328 --NSANRRIDILVED 340
              + NRR+ + +E+
Sbjct: 291 QGRAQNRRVTVRLEN 305


>gi|327405902|ref|YP_004346740.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327321410|gb|AEA45902.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 238

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 5/106 (4%)

Query: 235 PMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F              +   + +   H      I  ++D+         N +LS DRA 
Sbjct: 133 VFFPYKKWSINLSFYQEIDDLVNQYFNHKGSSFKINAYSDS---HGSEESNLKLSKDRAK 189

Query: 294 SAYQVLMKSGVSEDRISKISGFAH-HRLKIASDPMNSANRRIDILV 338
                L+     + R  +  G     + +I    ++  NRR  I++
Sbjct: 190 FIRNYLINEKKVDARDIQTEGKGSKSKERITEPDLDFMNRRAVIIL 235


>gi|19352400|ref|NP_598158.1| hypothetical protein pB4p61 [uncultured bacterium]
 gi|19070067|emb|CAD24383.1| Upf30.5 protein [uncultured bacterium]
          Length = 147

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292
             F  SS+   P+         E+LA +    +I I G T              L+L RA
Sbjct: 43  VSFPDSSTTFRPDAST-----AELLAEAKGAAIIYISGRTSTLRASASDE---ALALRRA 94

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA Q L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 95  LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRYQNQRVDIEV 141


>gi|58616636|ref|YP_195845.1| outer membrane protein [Achromobacter xylosoxidans A8]
 gi|190571962|ref|YP_001967686.1| hypothetical protein pCNB_p42 [Comamonas testosteroni CNB-1]
 gi|311109703|ref|YP_003982555.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
 gi|58416234|emb|CAI47829.1| outer membrane protein [Achromobacter xylosoxidans]
 gi|119943700|gb|ABM06222.1| hypothetical protein [Comamonas testosteroni CNB-1]
 gi|310764392|gb|ADP19840.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
          Length = 147

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292
             F  SS+   P+         E+LA +    +I + G T              L+L RA
Sbjct: 43  VSFSDSSTTFRPDAST-----AELLAEAKGATIIYVSGRTSTLRPSAADE---ALALRRA 94

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA Q L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 95  LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRHQNQRVDIEV 141


>gi|157364674|ref|YP_001471441.1| OmpA/MotB domain-containing protein [Thermotoga lettingae TMO]
 gi|157315278|gb|ABV34377.1| OmpA/MotB domain protein [Thermotoga lettingae TMO]
          Length = 289

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEV 265
           +A+     +  +    G +I + D      F  +S+   PE   +L KIG + + H+T V
Sbjct: 88  IAEEYKGKITIQEKDEGTVIIMQD---MAFFYPASAKLTPEAKELLGKIGSIVIEHTTNV 144

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS 302
           + I G+ D  P    +I   NW LS  RA S  Q   + 
Sbjct: 145 LQIYGYADDQPLSQDSIYVSNWHLSSARASSVVQFFTEE 183


>gi|167585369|ref|ZP_02377757.1| cytochrome c oxidase, subunit II [Burkholderia ubonensis Bu]
          Length = 514

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+        +    +    +      +  +++ G TD       A  N  L+  RA + 
Sbjct: 418 FETGKDTLPADAQSAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKHRAQAV 474

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 475 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 510


>gi|46398705|gb|AAS92038.1| IcmN protein [Legionella pneumophila]
          Length = 164

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI       +F   S      +  +L +I   L
Sbjct: 25  DATIIKMMTDLNKKGIKVASVGQNDLISIXAS---ALFADQSPRLNWASYSLLNEIAAFL 81

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 82  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 137

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 138 KPITSYTLGGD--RSPNARVEITFRR 161


>gi|46398695|gb|AAS92033.1| IcmN protein [Legionella pneumophila]
          Length = 167

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI       +F   S      +  +L +I   L
Sbjct: 28  DATIIKMMTDLNKKGIKVASVGQNDLISIXAS---ALFADQSPRLNWASYSLLNEIAAFL 84

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 85  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 140

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 141 KPITSYTLGGD--RSPNARVEITFRR 164


>gi|296127832|ref|YP_003635084.1| hypothetical protein Bmur_2818 [Brachyspira murdochii DSM 12563]
 gi|296019648|gb|ADG72885.1| hypothetical protein Bmur_2818 [Brachyspira murdochii DSM 12563]
          Length = 197

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                 + V+ + +  +  +   ++ + GH D +   N    N+RLS  RA     V++ 
Sbjct: 77  YNIEDYSYVMNEVMTFMSNNRNSILIVEGHADITGHNNGDI-NFRLSERRASVIRDVILS 135

Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
           SG S  R+ +I  ++    K       S NRR+D +
Sbjct: 136 SGFSYKRV-QIFAYSDIIPKY--ITNISQNRRVDFV 168


>gi|126732885|ref|ZP_01748676.1| OmpA domain protein [Sagittula stellata E-37]
 gi|126706661|gb|EBA05735.1| OmpA domain protein [Sagittula stellata E-37]
          Length = 518

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 9/174 (5%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQ 231
             P        A    +  ++++  +      + ++      G+      TG L  +   
Sbjct: 346 RSPQAQIVIRRAGFVDQAAEEISADLQGDRLSNAILTAQGANGLATLQRLTGTLAPMRRL 405

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
             +  F+  SS    ++   + ++   L               S     A  N  ++  R
Sbjct: 406 TTSFRFETGSSRLDAQSRSNVLQLAHDLEAGRYDGRKLLFVGFSDGAGPADANLAIARRR 465

Query: 292 AYSAYQVLMKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339
           A +     ++       ++        F         D       NRR+++ V+
Sbjct: 466 AEAVKSA-VEVTAETADLTSFELALDAFGEAMPMACDDTSWGRQVNRRVEVWVK 518


>gi|313886679|ref|ZP_07820389.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923841|gb|EFR34640.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
          Length = 310

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 62/196 (31%), Gaps = 13/196 (6%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               N +     +G       D  K++ +E           +    +  ++L  L  ++ 
Sbjct: 122 PAGSNFVVTQGAQGALPTNDADKIKALEEELARLKATQQNPQRDDDQIAQQLAALRNQLD 181

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-L 259
                 V +   + V+ +      +        +  F  +S +   E    ++ + +  +
Sbjct: 182 ELEKAPVYNYDNRRVIHQDRSRNNV----QLSRSVFFKVNSDVLNAEGREAVRNVADFVI 237

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                ++ + G+            N +L+  RA S  + L ++GV    I +        
Sbjct: 238 NDPRALVLVYGYAS---IDGPVDFNNKLAAKRAASVIKALQEAGVPAAAIKRYDNGVDTT 294

Query: 320 LKIASDPMNSANRRID 335
               +D      RR+D
Sbjct: 295 PAKRTDA-----RRVD 305


>gi|270159049|ref|ZP_06187705.1| IcmN (DotK) [Legionella longbeachae D-4968]
 gi|269987388|gb|EEZ93643.1| IcmN (DotK) [Legionella longbeachae D-4968]
          Length = 183

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L  +  K    +     +T+  L  +   KGV   T     +ISI       +F+  + 
Sbjct: 27  ALDKEEPKYPCKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASY---LFESETP 83

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               ++  +L +I   L    ++        +            L+L R+    + L   
Sbjct: 84  HLKWKSYALLNEIAVFLKQFRKIAINIASYSSKYISPQREH--ALTLARSRVVSEYLWSQ 141

Query: 303 GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
           GV   R     G    +          +S N R++I    
Sbjct: 142 GVD-SRFIFTQGLGSDKPIIAYTEGGDSSVNARVEITFRR 180


>gi|296126314|ref|YP_003633566.1| OmpA family protein [Brachyspira murdochii DSM 12563]
 gi|296018130|gb|ADG71367.1| OmpA family protein [Brachyspira murdochii DSM 12563]
          Length = 200

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 11/117 (9%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283
              +++     +F    +       +   ++ E L  +T    I   HT           
Sbjct: 64  RGRVLETNPKIIFKLVETNIPASADITFAQVMEFLDKNTNANIILEAHTSNRGI--AYPY 121

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338
           N+ LS+ RA +  + L+  GV+ +R+ + S       +  +      N  RR + ++
Sbjct: 122 NYNLSVVRAKNGKKYLLDKGVASERVIE-SPLGEALPEYPT-----QNDLRRYEFVI 172


>gi|289166115|ref|YP_003456253.1| Hypothetical protein of unknown function [Legionella longbeachae
           NSW150]
 gi|18693264|gb|AAL78305.1|AF288617_2 DotK [Legionella longbeachae]
 gi|288859288|emb|CBJ13222.1| Hypothetical protein of unknown function [Legionella longbeachae
           NSW150]
          Length = 167

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L  +  K    +     +T+  L  +   KGV   T     +ISI       +F+  + 
Sbjct: 11  ALDKEEPKYPCKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASY---LFESETP 67

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
               ++  +L +I   L    ++        +            L+L R+    + L   
Sbjct: 68  HLKWKSYALLNEIAVFLKQFRKIAINIASYSSKYISPQREH--ALTLARSRVVSEYLWSQ 125

Query: 303 GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
           GV   R     G    +          +S N R++I    
Sbjct: 126 GVD-SRFIFTQGLGSDKPIIAYTEGGDSSVNARVEITFRR 164


>gi|170734192|ref|YP_001766139.1| cytochrome c oxidase subunit II [Burkholderia cenocepacia MC0-3]
 gi|169817434|gb|ACA92017.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia MC0-3]
          Length = 532

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S +P      +        AH    +++ G TD +     A  N  L+  RA + 
Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANTELAKHRAQAV 492

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528


>gi|289548246|ref|YP_003473234.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
 gi|289181863|gb|ADC89107.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
          Length = 209

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD        +    L +  + +  S   + + G  D       ++ N+ LS+ RA    
Sbjct: 111 FDFDKFNIKKKEAKKLDEAVDKIKSSGREVLVVGFADKV---GTSKYNFNLSMWRAQMVA 167

Query: 297 QVLMKSGVSEDRISKISGFAHH 318
             L K GV   +I +++ +   
Sbjct: 168 SYLAKKGVDIGKI-RMAAYGKE 188


>gi|71906332|ref|YP_283919.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71845953|gb|AAZ45449.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 184

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 8/159 (5%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +  K+ + LA  + +     +  +    +      T     I +  N   F   S+    
Sbjct: 31  ELPKQEEPLASVVQNGHQAPLPRSTGARIEMHRDETEEAPVIAE-ENAVFFTLGSAALSH 89

Query: 247 ETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
                L+ I E L A  T  + + G+ +       +  N  +S +R  +    L K GV 
Sbjct: 90  SGTQKLEIIAERLIADRTLHVLLVGYAND---NGSSSFNLAVSDNRLATVAAFLRKRGVH 146

Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
            ++I ++      +              RR+D+++ +++
Sbjct: 147 GEQI-RVQALGSEKNLSNCRSSKCRQKFRRVDLVIRNKK 184


>gi|313610151|gb|EFR85461.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208]
          Length = 98

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 42/96 (43%)

Query: 19  KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           K+       +   +W I Y+D +T+L+A F+V++  ++ D    + +   F    +    
Sbjct: 3   KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            ++    ++  P+  + N +  +++E   K     +
Sbjct: 63  GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQ 98


>gi|221065313|ref|ZP_03541418.1| cytochrome c oxidase, subunit II [Comamonas testosteroni KF-1]
 gi|220710336|gb|EED65704.1| cytochrome c oxidase, subunit II [Comamonas testosteroni KF-1]
          Length = 524

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 12/107 (11%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+   S    +    ++K  E   AH    I++ G  D++     A  N  L+ +RA
Sbjct: 424 QVFFETGKSALDDQAQAAVKKAAEYWKAHKDGKIALSGFVDST---GNADKNAELAKERA 480

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337
            +  ++L  SG++ DRI         +     A+   +   RR+DI 
Sbjct: 481 KAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 521


>gi|71907423|ref|YP_285010.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847044|gb|AAZ46540.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 156

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 15/116 (12%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
           + +      F   ++        V+ K  E L+ +   ++ + G  D          N  
Sbjct: 52  VGEALAKVFFAVGAAALDEADKGVVAKTLEALSANPNAIVLLSGFHD---PSGDPAKNAE 108

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVE 339
           L+  RA S    L+ +GV+ +RI         +      A  P     RR++I V+
Sbjct: 109 LAKHRAQSVRDALVAAGVAAERIK------FRKPESTLGAGSPEEG--RRVEIRVQ 156


>gi|149919334|ref|ZP_01907816.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
 gi|149819834|gb|EDM79258.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
          Length = 383

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 11/79 (13%)

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISKISGFAH------ 317
            + I GH D     N    N  LS  RA    + L     SE R    +           
Sbjct: 65  HLLIIGHADED---NTDEYNRALSQRRAEHVRERLAARLPSEARERLHLEARGEWDASDR 121

Query: 318 HRLKIASDPMNSANRRIDI 336
                + +   + NRR+++
Sbjct: 122 AEP-SSDEDAKARNRRVEL 139


>gi|251733459|emb|CAR82479.1| pal [Rhizobium undicola]
          Length = 87

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 5/88 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + L   ++  I++ GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARRAAATKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325
            L+  G+   RI  IS +   R     D
Sbjct: 58  YLVSRGIPASRIKTIS-YGKERPVATCD 84


>gi|302875501|ref|YP_003844134.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307687955|ref|ZP_07630401.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302578358|gb|ADL52370.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
          Length = 233

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 25/167 (14%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
             +     ++   L   +   +   ++F+     + I     +   +F         E +
Sbjct: 58  DDIAKQRAELYERLENDLKPKLGDDIIFDKENGRLEI-----KTEVLFQVDKYELTGEGV 112

Query: 250 ---------VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                            V     + + ++GHTD +     A  N  LS +RA S    ++
Sbjct: 113 KIAKEVSEAFYTLFSNPVYRDKIKYVEVKGHTDNTFL---ADYNRFLSTNRAASFVNAMV 169

Query: 301 KSGVSEDRISKI---SGFAHHRLKIASDPMNS-----ANRRIDILVE 339
            +G   +  +     SG +    K+ S    S      NRRI+I +E
Sbjct: 170 PNGSKYEEYAAYFKSSGMSKFEPKVGSVDGQSMVEQDQNRRIEINIE 216


>gi|300728164|ref|ZP_07061535.1| putative immunoreactive 43 kDa antigen PG32 [Prevotella bryantii
           B14]
 gi|299774590|gb|EFI71211.1| putative immunoreactive 43 kDa antigen PG32 [Prevotella bryantii
           B14]
          Length = 378

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 21/155 (13%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +  +    +N + N     L+ +      + K++ DL   +               +   
Sbjct: 216 RDQNEIDGLNNQINSLRSDLNDKDAQLSAKDKKIADLQNALDECQKKPKKAATATNLQPT 275

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
                            +F +  S         ++ I   + +  E  + I+G+      
Sbjct: 276 ----------------VLFRQGKSSIDKAQYAPIELIASYMKNHPEANVEIKGYASPE-- 317

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
              A  N +LS  RA +    L+K   +S DR+  
Sbjct: 318 -GNAEFNQKLSQARAEAVKNALVKKYKISADRLKA 351


>gi|46398697|gb|AAS92034.1| IcmN protein [Legionella pneumophila]
          Length = 166

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 27  DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLHWASYSLLNEIATFL 83

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 84  KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 139

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 140 KPITSYTLGGD--RSPNARVEITFRR 163


>gi|227536735|ref|ZP_03966784.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243427|gb|EEI93442.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 394

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
            ++ L  L ++++     + +++  + +      T   +  +++       F   +S   
Sbjct: 243 DEEELNALRRRVNELAANNDVLSKQLEEAGNKSMTNVVVNKNVLAAPILVTFKIGTSEIS 302

Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
            ET V L    +V+          I G+ D          N RLS+ RA +   +L+   
Sbjct: 303 NETRVNLGFFAKVIKEGDAQVIYRITGYAD--KGTGTPEINQRLSIARAEAVKSILVNEF 360

Query: 303 GVSEDRISKISGFA 316
            V   +++ ++   
Sbjct: 361 AVPARQLTTVAAGG 374


>gi|332300026|ref|YP_004441947.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177089|gb|AEE12779.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 325

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 9/196 (4%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
               N +     +G       D  K++ +E           +    +  ++L  L  +++
Sbjct: 133 PAGSNLVVTQGAQGALPTNDADKIKALEEELARLKAAQQNPQRDDDQIAQQLAALRNQLN 192

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-L 259
                     +               + +    +  F  +S +   E    ++ + +  +
Sbjct: 193 ELEKASEKAPVYNYDNRRVIHQDRSRNNVQLSRSVFFKVNSDVLNAEGREAVRNVADFVI 252

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319
                ++ + G+            N +L+  RA S  + L ++GV    I +        
Sbjct: 253 NDPRALVLVYGYAS---IDGPVDFNNKLAAKRAASVIKALQEAGVPAAAIKRYDNGVDTT 309

Query: 320 LKIASDPMNSANRRID 335
               +D      RR+D
Sbjct: 310 PAKRTDA-----RRVD 320


>gi|90579803|ref|ZP_01235611.1| hypothetical protein VAS14_16496 [Vibrio angustum S14]
 gi|90438688|gb|EAS63871.1| hypothetical protein VAS14_16496 [Vibrio angustum S14]
          Length = 342

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 9/104 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +         L ++   +  + E    I G  D       A+ N ++S +RA +  + 
Sbjct: 244 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAKVNEKVSAERAANVAKY 300

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339
           L  +G+   R+  +S   ++     +D     N   R + I+++
Sbjct: 301 LEANGIDASRL-TVSSVGYNNPL-KTDAATKTNYVQRSVQIILK 342


>gi|46398715|gb|AAS92043.1| IcmN protein [Legionella pneumophila]
          Length = 176

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 14/137 (10%)

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267
           D   KG+   +     LISI     + +F   S      +  +L ++   L    ++ I+
Sbjct: 46  DLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEVAAFLKQFRKIAIT 102

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323
           +  ++         R    L+L R+    + L   GV   RI    G    +   +    
Sbjct: 103 VTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSDKPITSYTLG 158

Query: 324 SDPMNSANRRIDILVED 340
            D   S N R++I    
Sbjct: 159 GD--RSPNARVEITFRR 173


>gi|46398689|gb|AAS92030.1| IcmN protein [Legionella pneumophila]
          Length = 189

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +T+  ++ D   KG+   +     LISI     + +F   S      +  +L +I   L
Sbjct: 50  DATIIKMMTDLNKKGIKVASVGQNDLISI---PASALFXDQSPRLNWASYSLLNEIAAFL 106

Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               ++ I++  ++         R    L+L R+    + L   GV   RI    G    
Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162

Query: 319 RLKIA----SDPMNSANRRIDILVED 340
           +   +     D   S N R++I    
Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186


>gi|229903070|ref|ZP_04518186.1| Outer membrane protein [Yersinia pestis Nepal516]
 gi|229679980|gb|EEO76080.1| Outer membrane protein [Yersinia pestis Nepal516]
          Length = 71

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
           +L  S VS      + G+   R    +D     + NRR++I +
Sbjct: 1   MLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 42


>gi|157960285|ref|YP_001500319.1| OmpA domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157845285|gb|ABV85784.1| OmpA domain protein transmembrane region-containing protein
           [Shewanella pealeana ATCC 700345]
          Length = 346

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 5/118 (4%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284
           I         +F   SS         L ++ ++      +VI + G +D       ++ N
Sbjct: 228 IHTEKSSVAVLFGFDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQ---GDSQYN 284

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            +LS  R       L+  GV   +I                   +  RR+ + +  ++
Sbjct: 285 LKLSEKRVQHVEAYLVSHGVEVKKIDT-QAVGEQDAHANLRKDRALERRVIVTLTSQE 341


>gi|218261428|ref|ZP_03476249.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224038|gb|EEC96688.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii
           DSM 18315]
          Length = 214

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 16/156 (10%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLAKKISST-- 202
           +L RD+ +     ++     S N  E   L  L  +K+  +  ++R + +L   I++   
Sbjct: 61  ALERDTTRMGKNIRNYQNMLSTNMTEQEKLNSLLSQKMSELDERERTINELQDMINAQTE 120

Query: 203 --------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
                   +   +       +        + +++ D+    +F+  S+         L K
Sbjct: 121 RVQNLLNSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFESGSARVDKRGKEALAK 177

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLS 288
           + EVL   +++   I GHTD+ P       DNW LS
Sbjct: 178 LAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNWDLS 213


>gi|255608876|ref|XP_002538967.1| conserved hypothetical protein [Ricinus communis]
 gi|223509514|gb|EEF23416.1| conserved hypothetical protein [Ricinus communis]
          Length = 313

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PL 245
              +R+ D+ K +    + L A      V        + +       T  FD+       
Sbjct: 192 ASAQRVDDVTKTLPQIDAALAACMPPVAVQPVGLPPKLTLE---GDATFAFDRGDIAGLS 248

Query: 246 PETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           P     L+++   +  + +V    + G+TD          N RLS  RA +  + L  +G
Sbjct: 249 PAGKARLEQLIRDMKQAGDVTAIRVEGYTDRL---GGDALNRRLSAARAETVRRYLAANG 305

Query: 304 VSE 306
           +  
Sbjct: 306 IDA 308


>gi|311746524|ref|ZP_07720309.1| putative outer membrane protein [Algoriphagus sp. PR1]
 gi|126575424|gb|EAZ79756.1| putative outer membrane protein [Algoriphagus sp. PR1]
          Length = 777

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 85/291 (29%), Gaps = 27/291 (9%)

Query: 56  ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115
               +      + F                     +  ++ + +        +      +
Sbjct: 508 TFTKEEFDEELEKFRSEMLQAQAKRDSAMLMAFASKIPTEEEENSRARNRDNEEDPQEVL 567

Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            +T+        +         +  +     L      G     ++ +  S +K+E    
Sbjct: 568 INTDGIDDKTAKKLEKNRKKQEKLEKKNNELLKDALLIGGTAAATSAINNSGDKKEAAAQ 627

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
                  +  +     L D  + I   +  +  +                  +   +   
Sbjct: 628 AAYDSALLAKIALDSMLIDSLRNIPPVIDTVEIEKPTPQ------------FLSSSKVEL 675

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            FD + + P  E I  L  + E L ++ E  + + G  D +        N +++  R  S
Sbjct: 676 YFDINMTEPSEEEIQKLDPVIEYLTNNPEVKVELIGFADNT---GSISYNLKITEKRVES 732

Query: 295 AYQVLMKS-GVSEDRISKISG----FAHHRLKIASDPMNSANRRIDILVED 340
             ++L     +SEDRI K +G        +  + +D      R+++I + +
Sbjct: 733 VTEILTSKFQISEDRILKNNGGLIIRGSTKGSVKND------RKVEIRILN 777


>gi|323137327|ref|ZP_08072405.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
 gi|322397314|gb|EFX99837.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
          Length = 559

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/200 (10%), Positives = 63/200 (31%), Gaps = 11/200 (5%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
            + ++E    +            +      ++  +        ++      + + +++ L
Sbjct: 357 AANEAEPLAVADALVEAASPYRVEREVSIVALASQTQEMRAGETRAAATLQEAQAQIETL 416

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV-LQK 254
             ++  T + L                 + +    +     F +  ++  P      L +
Sbjct: 417 RAELKETRASLDRYLAQD------EAPHVKLRRFVETFAVFFTELDTLSNPAATAKGLDE 470

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314
           +  ++  S   + + G+ D       A  N   S  RA     +L++ GV   R++ +  
Sbjct: 471 LAGLMKASGANLRVVGYADEV---GSATLNRAASRKRADKIVSMLVERGVPRQRLALVP- 526

Query: 315 FAHHRLKIASDPMNSANRRI 334
            +       ++     +RR+
Sbjct: 527 RSTLDPIADTEFDAIRSRRV 546


>gi|313141693|ref|ZP_07803886.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130724|gb|EFR48341.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 241

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 24/190 (12%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              L   + E +   K+   +    + + + L   +     K +           ++  +
Sbjct: 18  QKELALQNAELLALNKQMSDVAKTHQNLQTELYKDLVAEFSKDLGKWNAEIDEDNTVRFR 77

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTD-----ASPF 277
               +FD+           +L                    E I I GHT      A   
Sbjct: 78  EPDILFDQGEKEVKSRFKEILDDFFPRYIKILSRPQYKEDIEEIRIEGHTSKEWKNAKSL 137

Query: 278 RNIARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKIASDPMNSAN 331
            +    N  LS  RA    +       +++ +     + + +G +  +   +++     +
Sbjct: 138 EDRYLGNAELSQARALEVLKYCFNNQQIAKQKEWLVSVLRANGLSFAKPLESAE----LS 193

Query: 332 RRIDILVEDR 341
           RR++  V  +
Sbjct: 194 RRVEFKVLTK 203


>gi|42522454|ref|NP_967834.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
 gi|39574986|emb|CAE78827.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
          Length = 368

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 15/157 (9%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A      ++++ + I+       A  +         +   +  I    +   F  S    
Sbjct: 205 AAAEPTVMEEVQEDITYQERVEPARPVAAVEAGSALKDVNMNMIAGAGSAIQFRSSQYAI 264

Query: 245 LPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                  LQ++ +VL  + +    + I G+ DA+        N R+S  RA S   +L +
Sbjct: 265 SGADNRKLQQVAKVLNENPDLVERVEIHGYADAT---GTDEINQRISQARADSVKNILER 321

Query: 302 SGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDIL 337
           +G     +  + G               S +RR +++
Sbjct: 322 NGF--TNVEAV-GKG-----ATDSTGIRSQDRRAELV 350


>gi|169836490|ref|ZP_02869678.1| hypothetical protein cdivTM_05195 [candidate division TM7
           single-cell isolate TM7a]
          Length = 349

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294
           F     +P       L+ I  V+    +  SI   GHTD++     A  N +LS+ RA +
Sbjct: 239 FKVDGRVPNEGEAADLRTIAGVINQFADGGSIDFVGHTDST---GSAAYNQKLSVARAQN 295

Query: 295 AYQVLMKSGV 304
             ++L   G+
Sbjct: 296 VARLLRDYGL 305


>gi|46202522|ref|ZP_00053085.2| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Magnetospirillum magnetotacticum MS-1]
          Length = 164

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 13/105 (12%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ + +     T+ VL  +   L      +I I+G TD+      A  N  LS  RA + 
Sbjct: 61  FNHAKADITGSTMQVLWGLAPALKAAEPGLIRIQGFTDS---SGKAAYNQVLSEKRAQAV 117

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337
            + L K G++     +++G       +        +   RR++I 
Sbjct: 118 AEQLRKLGITAR--IEVTGQG----IVKGGKKGQKDQGARRVEIT 156


>gi|307944849|ref|ZP_07660187.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307772063|gb|EFO31286.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 310

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 82/297 (27%), Gaps = 17/297 (5%)

Query: 20  KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78
           + A ++  N+       + D   T++M    ++ I+        + I + +         
Sbjct: 3   RRAAEEAENHWPG----FVDALSTIVMVVTFLLIILAVAIFVLSQNIAKSYIETHSAKTE 58

Query: 79  ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG------STNQKKQYQRLENNIF 132
              G   + +P   + +   D  ++  +   + +           T              
Sbjct: 59  QGGGDKMDPDPGSATKEFMGDKKVEAPVPDTATEKMTEAPPPPVPTEPDPTVTPQPQEPV 118

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
               +  +         D+       KS    +S +   +     L     +       +
Sbjct: 119 TQPPAPTTSATAPQSLSDTPNENTAPKSPGKTQSKDTFNSQLAEELKGNDDVEEDTDLSI 178

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
                 I      +   +  +     T +    I +ID      F  +S          +
Sbjct: 179 LSRKVPIEEKRIVVAPQDKTEQPKASTVQKAQTILVID------FQSASVKMDEAAANEI 232

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           +K  +  +   +   +   +  SP         R++  RA +A   L+ SG   + I
Sbjct: 233 RKFSQTNSAILKDQKVTVWSFTSPAEGSVSQAKRVAYYRALAARNNLLSSGTPPENI 289


>gi|332304686|ref|YP_004432537.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172015|gb|AEE21269.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 589

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 20/259 (7%)

Query: 67  QYFNPFGKNLMTASKGIFDEQNPPERS----SQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
             F  +   LM                    +Q      +   + ++     I +    +
Sbjct: 307 TSFYAYKLWLMQGYVNQVQTLQQEPGIMLIRAQRDGIQQVILDVLRDPNAQPINTWLASR 366

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +      N+   S          +  R           TD   ++  E            
Sbjct: 367 EIPAEVINLTEKSFLSLESQIVRARLRGLLSNYPAIAITDDGNTLAGELTQQQHHALSAD 426

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           +  +      Q L   I  +    +            T   + IS+I    +  F  +S+
Sbjct: 427 LAQLPGVTDPQSLLAPIQISDKQTLELGAKDSA---MTLIKLKISLI-NSTSVEFASNST 482

Query: 243 IPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              P+    L  +                     I G +DA   +     N  LS+ RA 
Sbjct: 483 QLSPQAEQSLASLASHAKALLSLAGQAQLDVSFIIIGASDA---KGSQSYNEVLSIKRAQ 539

Query: 294 SAYQVLMKSGVSEDRISKI 312
           +    L + G+  D+++ I
Sbjct: 540 TVRDTLQEYGLPSDKLNAI 558


>gi|237741814|ref|ZP_04572295.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|229429462|gb|EEO39674.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
          Length = 233

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 61/190 (32%), Gaps = 37/190 (19%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            ++K+K       K  ++  + I   L+    +++ K            +SI  +     
Sbjct: 35  QVNKQKEHIEVIAKDFKNTKQSIYKDLNKEFEEDLKKW---NAYIDKDTLSITFKEPDVF 91

Query: 237 FDKSSSIPLPET--------IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-----ARD 283
           F+  SS                 ++ + +      E I I GHT +   ++         
Sbjct: 92  FEVGSSEINDNFKVVLKDFFPRYIEMLYKNYKDEIEEIRIEGHTSSEWNKDDDNLQAYFK 151

Query: 284 NWRLSLDRAYSA-------------YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329
           N  LS  RA S                 L++        +  +G ++    I     N +
Sbjct: 152 NMSLSQARARSVLEYCMLLDSMENYRDFLIEK-------ATANGLSYSHRIIEDGKENYN 204

Query: 330 ANRRIDILVE 339
            +RR++  ++
Sbjct: 205 KSRRVEFKIK 214


>gi|217970277|ref|YP_002355511.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
 gi|217507604|gb|ACK54615.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
          Length = 756

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 16/114 (14%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-------ISIRGHTDASPFRNIARDNWRLSL 289
           FD  S       I  L         +          + I GHT A         N  LS 
Sbjct: 505 FDYDSDALTGTAIATLNGFIARFNGAVGNAAHQEVRVEIVGHTSA---AGSEHYNVDLSR 561

Query: 290 DRAYSAYQVLMKSGVS--EDRI-SKISGFAHHRLKIASDPMNSANRRIDILVED 340
            RA +    L + G +   +R+  +  G A       + P  ++++R D++V+ 
Sbjct: 562 RRAEAVRTHLERHGFANTANRVHIRARGEAEADP---TQPRRASDQRADLVVDG 612


>gi|223938134|ref|ZP_03630031.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
 gi|223893178|gb|EEF59642.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
          Length = 214

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD             L ++   L       + + G+ D          N  L   RA 
Sbjct: 107 VYFDFDKFSIRSSDQSKLSEVANYLKSHPGTAVRVEGNCDER---GTEEYNRSLGERRAL 163

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342
           +A + L   GV    +  +S F   +  +    +   + NRR + +V +  
Sbjct: 164 AAREALATMGVDPTLVETVS-FGEDKPAVPGHDESAYAKNRRDEFVVLNPP 213


>gi|109675220|gb|ABG37059.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 282

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 218 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 274

Query: 293 YSAYQVLM 300
            S    L+
Sbjct: 275 NSVKSALV 282


>gi|108761445|ref|YP_635359.1| hypothetical protein MXAN_7246 [Myxococcus xanthus DK 1622]
 gi|108465325|gb|ABF90510.1| hypothetical protein MXAN_7246 [Myxococcus xanthus DK 1622]
          Length = 244

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 21/95 (22%)

Query: 268 IRGHTDASPFRN--------------IARDNWRLSLDRAY----SAYQVLMKSGVSEDRI 309
           + GHTD  PF                   +N R S  RA     +    L  +G   D  
Sbjct: 147 LEGHTDDRPFLGTSWECGVREGVARYSFENNVRASAARAQEVFFTVRNQLRDAGYERDCF 206

Query: 310 SK---ISGFAHHRLKIASDPMNSANRRIDILVEDR 341
                +SG      +  +D     NRR+ I V   
Sbjct: 207 DSNFVVSGRGQTAPRPGTDGSEPENRRLVIRVRGD 241


>gi|254427536|ref|ZP_05041243.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196193705|gb|EDX88664.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 212

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   S++    + + L+   + +A     + +  G++D       A  N  L+  RA + 
Sbjct: 99  FAFDSAVLTDASRIALKAWYQEVASLEGPVVVVNGYSDPL---GGAAYNLALAERRAQAV 155

Query: 296 YQVLMKS--GVSEDRISKISGFAHHRLKIASDPMN----------SANRRIDILVEDRQG 343
            Q   +   G+++     + G                          +RR+ +LV+   G
Sbjct: 156 AQWWRQQGEGIAD---VTVIGHGEDHSVTGDRCKALRGDALKQCHQQDRRVQLLVKMGSG 212


>gi|110589616|gb|ABG77310.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 217 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 273

Query: 293 YSAYQVLMKS 302
            S    L+  
Sbjct: 274 NSVKSALVNE 283


>gi|313159176|gb|EFR58549.1| OmpA family protein [Alistipes sp. HGB5]
          Length = 402

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 17/109 (15%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLS 288
             +  +FD S S+  P+    L+ I E +       V  I GH D       A  N R++
Sbjct: 299 DTSIILFDYSMSVLTPQEKTRLELIAEQIKSGSKDAVYQIVGHADQQ--TGTAAGNKRVA 356

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-----NSANR 332
             RA   Y  L+  GV+  +++   G         + P       +ANR
Sbjct: 357 EHRAKRVYDFLVSKGVNPKQLN-YEGKG-------NSPDPFKKVQAANR 397


>gi|86143302|ref|ZP_01061704.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217]
 gi|85830207|gb|EAQ48667.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217]
          Length = 239

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 12/183 (6%)

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +S D  K     ++           L    ++RL+   + I      L    + K     
Sbjct: 63  ESEDASKKRGIYQDSSFAETGNYDALINNIQERLERNQRAIEEDEERLRLAKLNKKSKAS 122

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277
            T         D    P F  +  +   +    L ++   L  +    I I GHTD    
Sbjct: 123 KTPRPEA----DLTFRPSFKLARLVHDQKAAEFLAQVERQLKINPLTQIEIIGHTDHI-- 176

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334
               RDN++++L++A    Q ++KS  + E+++   S           +  +    N R 
Sbjct: 177 -GDDRDNYKIALEQAQKIRQFIIKSFNLPENQVIATS-KGEADPLYPREMEDKIELNNRY 234

Query: 335 DIL 337
           +++
Sbjct: 235 ELI 237


>gi|326794508|ref|YP_004312328.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
 gi|326545272|gb|ADZ90492.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
          Length = 723

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 2/206 (0%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            D +  ++            I     S   E          +             S +  
Sbjct: 492 PDAQKVTSWLGDVVSSELITINERRFSAYDERLIPRRLARIDAAFPNVAFDAQSHSFSGV 551

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
            +       +  I  ++    +  + + +S     + +    + ++ +  R   L S+  
Sbjct: 552 LSAPKFDQLRSAIQRIQELVEVDSVLRGVSIKSQRVDSGVSNELLIEQQIREVELSSVPF 611

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             N      + S  +      + ++ E LA   +   +      S        N +LSLD
Sbjct: 612 DVNASQLPSNHSDLIKSLSREITRLAE-LAKVLDQRLLVVVMGTSTLGGTDSYNQQLSLD 670

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFA 316
           RA S  + L+  GVS + I + +G  
Sbjct: 671 RADSVIKALISEGVSPE-ILRTAGLG 695


>gi|315607436|ref|ZP_07882432.1| possible major outer membrane protein OmpA [Prevotella buccae ATCC
           33574]
 gi|315250868|gb|EFU30861.1| possible major outer membrane protein OmpA [Prevotella buccae ATCC
           33574]
          Length = 382

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 14/163 (8%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             L  + +  +  L  +++   +       +     +      +   +    +  F+ + 
Sbjct: 230 DALKAQYQNEIDGLRNQLNDANAENDRLRNMLANQPKAETPAAVKEFVQTPISVFFNLNK 289

Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           +     + +V +Q + +    +   + + G+ D+         N  LS +RA +    L 
Sbjct: 290 TNIASQKDLVNVQALAKYAKENNSKLLVNGYADS--ATGKPAHNQWLSEERAKTVAGELQ 347

Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340
           K G++   I+   G                 S NRR  + V +
Sbjct: 348 KMGINSSNITT-KGNGGVDELSPI-------SFNRRATVQVTE 382


>gi|220919231|ref|YP_002494535.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957085|gb|ACL67469.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 357

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            +    DA+P         RLS   A +A   L + GV+E R+S + G    R  + +  
Sbjct: 284 RVEAFVDATPDAQAD---QRLSQAMADAAVGRLRELGVAERRLSGV-GCGGERPLLPNFT 339

Query: 327 MNSA--NRRIDIL 337
           +     NRR++I+
Sbjct: 340 VRGRTANRRLEIV 352


>gi|257454660|ref|ZP_05619916.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
 gi|257447970|gb|EEV22957.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
          Length = 404

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +   + R +  F    +            I E  A   + I I G+TD++     A  N 
Sbjct: 278 VVFENGRLSFYFATGKAQVAGNAKEKANDILEA-AKQGKKIGISGYTDST---GNAAANE 333

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342
           +L+ +RA +    L+ +GV + ++  I      + +  +     +   RR+D  + D  
Sbjct: 334 KLAKERAQAVRSFLVANGVPQSQLELI------KPQDTTGAAGKDQEGRRVDAYIVDDN 386


>gi|88811687|ref|ZP_01126941.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
 gi|88791078|gb|EAR22191.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
          Length = 237

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 49/180 (27%), Gaps = 24/180 (13%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            +   +        ++     ++ +     D        +           D     +F+
Sbjct: 46  QERDQIREIAVAYQENQVAIYNALMKEFKDDLAHWNASIDRDSLAFRFKSPD----VLFE 101

Query: 239 KSSSIPLPETIVVLQKIGEV-------LAHSTEVISIRGHTDASP-----FRNIARDNWR 286
             S+   P    +L+               S + + I GHT ++             N  
Sbjct: 102 VGSAEIRPRFKDILEDFFPRYLGILKGFKDSIDEVRIEGHTSSTWNQRVTDTKAYFLNME 161

Query: 287 LSLDRAYSAYQVLMK----SGVSE--DRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338
           LS  R  S  Q + +     G      R     GF+  R  +        + +RR+   V
Sbjct: 162 LSQGRTRSVLQHVYRMPSIRGDQPWVQRQFAAVGFSSSRPILRPDGKEDRAHSRRVTFRV 221


>gi|88799106|ref|ZP_01114686.1| ompA family protein [Reinekea sp. MED297]
 gi|88778089|gb|EAR09284.1| ompA family protein [Reinekea sp. MED297]
          Length = 1048

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  SS   P  +  L K+  +L  +T+    I GHTD          N  LS  RA S 
Sbjct: 290 FDFDSSFLKPTMLNGLVKLERLLKENTDYKVQIVGHTD---LVGGNDYNMSLSERRARSV 346

Query: 296 YQV 298
              
Sbjct: 347 LAY 349


>gi|167643943|ref|YP_001672041.1| hypothetical protein pTer331_15 [Collimonas fungivorans]
 gi|166863235|gb|ABZ01491.1| hypothetical protein [Collimonas fungivorans Ter331]
          Length = 186

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 8/175 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           + +      +   S    +       +  L  +++ +   L  +     +     +    
Sbjct: 15  ACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQARPVIAPAVLQPAPP 74

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
                +  +  F  +++          Q +   L      I +RG TD            
Sbjct: 75  PPARSRTFSVHFPYNNTNFHLSADDSAQLLP--LLAKARRIEVRGRTDGQRPSTADE--- 129

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +++L+RA +A + L+  GVS   I  ++  +       +      S NRR+DI V
Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183


>gi|254966498|gb|ACT97225.1| TraQ [Synthetic plasmid pMOL98]
          Length = 186

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 8/175 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           + +      +   S    +       +  L  +++ +   L  +     +     +    
Sbjct: 15  ACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQARPVISPAVLQPAPP 74

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
                +  +  F  +++          Q +   L      I +RG TD            
Sbjct: 75  PPARSRTFSVHFPYNNTNFHLSADDSAQLLP--LLAKARRIEVRGRTDGQRPSTADE--- 129

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +++L+RA +A + L+  GVS   I  ++  +       +      S NRR+DI V
Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183


>gi|209519812|ref|ZP_03268597.1| cytochrome c oxidase, subunit II [Burkholderia sp. H160]
 gi|209499755|gb|EDZ99825.1| cytochrome c oxidase, subunit II [Burkholderia sp. H160]
          Length = 535

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 19/163 (11%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           + K +A  R  +L +    ++   +         G    +       +      +  FD 
Sbjct: 382 QPKQVADARNGKLPEGGDHLAEAGAAASGAAAASGAEAASAPAASDNAAATLPASVYFDT 441

Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             S++P      V        AH     ++ G TDA+     A  N +L+  RA +    
Sbjct: 442 GKSTLPADAKAAVDAAAAYAKAHPDAKFTLSGFTDAT---GSADVNAKLAKSRAEAVRDA 498

Query: 299 LMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           L  +G++ED I       I+G         +D   +  RR+ I
Sbjct: 499 LKAAGIAEDHIILKKPETITG--------GTDAKEA--RRVQI 531


>gi|257456384|ref|ZP_05621580.1| OmpA family protein [Treponema vincentii ATCC 35580]
 gi|257446044|gb|EEV21091.1| OmpA family protein [Treponema vincentii ATCC 35580]
          Length = 175

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 41/158 (25%), Gaps = 6/158 (3%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               K+ K  + + +   +  +             E        +      T  F   + 
Sbjct: 20  ASQPKQPKEEKPVVQTQQAETAPAEEKTAEPEKAPEQQPQRNTNNNAGTETTVYFAPKTY 79

Query: 243 IPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                T   L  I E L       I I GH              +LSL RA +  +    
Sbjct: 80  TIDTFTAHKLDGIAEQLKAKDVTQIKIVGHCAKMDSTKDEE---KLSLQRALAVARYFES 136

Query: 302 SGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337
           +G        ++         +         NRR++I 
Sbjct: 137 TGAFTADNMTVAAEGAQHPAGSHAEISERKHNRRVEIY 174


>gi|2895292|gb|AAC38192.1| DotK [Legionella pneumophila]
          Length = 134

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 14/140 (10%)

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265
           ++ D   KG+   +     LISI     + +F   S      +  +L +I   L    ++
Sbjct: 1   MMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFLKQFRKI 57

Query: 266 -ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323
            I++  ++         R    L+L R+    + L   GV   RI    G    +   + 
Sbjct: 58  AITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSDKPITSY 113

Query: 324 ---SDPMNSANRRIDILVED 340
               D   S N R++I    
Sbjct: 114 TLGGD--RSPNARVEITFRR 131


>gi|171057549|ref|YP_001789898.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170774994|gb|ACB33133.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
          Length = 230

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 18/221 (8%)

Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185
                    +    +          +E  +    S  +    +         +   +   
Sbjct: 4   PTLALSLAAALLLGACDAPPKPPAVNETTRRPANSAWVVDLQSCRSELANTRIDAAESAR 63

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSI 243
                               L+  +    V   +  +   +   + +   T  FD  SS 
Sbjct: 64  RADFAMATADRMVALQQAIELIKPSSPASVAIASPTSIREVMQPLANSIYTVQFDYGSSR 123

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
                  +   + +  A +  ++ +RG TD +          R++ +RA +    L+ +G
Sbjct: 124 VNLAPTFLRAVLDQ--ARTAPLVVLRGRTDGTQDVAAEG---RIARERAQAVKSHLVAAG 178

Query: 304 VSEDRISKISGFAHHRL----KIASDPMN--SANRRIDILV 338
           +  +RI         +        +   +  + NRR++I V
Sbjct: 179 LDPNRIRTT-----WQPTGDHAADNGTPDGQARNRRVEIEV 214


>gi|124516388|gb|EAY57896.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum
           rubarum]
          Length = 232

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           +    F  +S       + VL     +L  +    + + GHTD       +R N +L L+
Sbjct: 104 QKDIYFSFNSKKISYANLSVLHAYSRLLRKNPRLALRLYGHTDPV---GSSRFNHKLGLE 160

Query: 291 RAYSAYQVLMKSGVSEDRIS 310
           RA +A +VL+ +GV   RI 
Sbjct: 161 RALAARRVLLATGVPAKRIF 180


>gi|218508705|ref|ZP_03506583.1| hypothetical protein RetlB5_14646 [Rhizobium etli Brasil 5]
          Length = 56

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           SL RA +A +++        R+ +  G        ++      + NRRI I++   Q
Sbjct: 1   SLARASAAAEIIKSMMDDPGRV-REEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 56


>gi|329119291|ref|ZP_08247978.1| cytochrome c oxidase, subunit II [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464638|gb|EGF10936.1| cytochrome c oxidase, subunit II [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 223

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E  +   + D  +     ++     +    E+  +  L  +     +  ++++ +A+   
Sbjct: 37  ETGRIEGSPDYGRAASQEEAGQPAPTPQGGEDTGVVILLDKGEAPAQVPEQVEFVAEPDD 96

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           +  +        +          I+           F    S         L+ +    A
Sbjct: 97  APAAAPENAPAPQQPAAAQDEAKIVAQ--GGVVKFYFATGKSDVPSGAQEALKDVLVA-A 153

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
              + + + G+ D++     A  N  LS  RA +   VL   GV + +I          L
Sbjct: 154 LGGKKVVVSGYHDST---GNAAFNEELSKQRALAVRAVLQGFGVPDKQI---------EL 201

Query: 321 KIASDPMNS---ANRRIDIL 337
           +   +         RR+++ 
Sbjct: 202 RKPENTEAGSGEEARRVEVF 221


>gi|27381673|ref|NP_773202.1| hypothetical protein blr6562 [Bradyrhizobium japonicum USDA 110]
 gi|27354842|dbj|BAC51827.1| blr6562 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 13/231 (5%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                 VD   G   Q  Q Q  E       +  +++    +    +     L  +   +
Sbjct: 134 DQGDQQVDPLPGLDAQGHQQQLPEGRGRRGVSMMRAKGLTTAGLGIALGMALLAGAASAQ 193

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +    ++        E+   +      Q + ++  + +           +  +  +   
Sbjct: 194 TTPPTRDDIVGKLNHFEEAAEIDLPALKQQVMERAKARIKNDPGPVNRPPIAPDLAK--- 250

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281
              +        FD  + I  P +   + +I + L H         I GH +++      
Sbjct: 251 ---LPAFNAQIQFDADTPIIQPASYQTVGRIADALVHASLLPYTFLIVGHVESN--AKTR 305

Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331
             N  LS  RA +   VL+ +  +S  R+  I G    +    + P ++AN
Sbjct: 306 EANAILSQRRADAIRDVLVNTFKISTKRLHPI-GLGEEQFLDRAKPTSAAN 355


>gi|332653291|ref|ZP_08419036.1| OmpA family protein [Ruminococcaceae bacterium D16]
 gi|332518437|gb|EGJ48040.1| OmpA family protein [Ruminococcaceae bacterium D16]
          Length = 213

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 18/152 (11%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF--DKSSSIPLPETIVVLQKIGEVLA 260
           + G    +    V  E                 MF  +  + +        L+ + EV+ 
Sbjct: 55  IHGPEEQSAAGSVTVEEEPLVFETPFELNSTQVMFKAESDAFLDEAAAKEALKPVAEVIL 114

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA-HH 318
              +   +   T A+      +    LS  RA +   +L+ + GV E++++ I G     
Sbjct: 115 AHPDHPILLAGTTATD--GDQQARVDLSNRRAAAVKNLLVSAFGVPENQLTTI-GLGFEA 171

Query: 319 RLKIAS----------DPMNSANRRIDILVED 340
              +            +   + NRR+ I+++ 
Sbjct: 172 DPFVRGQDRDANGKFVESEGAKNRRV-IVMDA 202


>gi|312130909|ref|YP_003998249.1| thrombospondin type 3 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311907455|gb|ADQ17896.1| Thrombospondin type 3 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 571

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 67/253 (26%), Gaps = 10/253 (3%)

Query: 73  GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132
             +L    KG+   Q  P+R      D          + +   G  +        +++  
Sbjct: 309 KDDLCIDVKGLASLQGCPDRDGDGVADKDDACPDQAGTAN---GCPDSDGDGIADKDDAC 365

Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192
             S      +       D            +  +              +          L
Sbjct: 366 PYSAGTAELNGCPDSDGDGVVDNIDNCLNKVGSAAAAGCPDADGDGVPDVADKCPNLAGL 425

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
            D A        G+      K           L  +     +  F   +S     +   L
Sbjct: 426 VDNAGCPEDYKDGVPLLKGFKSASGCAITKDELDILSYAAQSIEFHPGTSRIKAASNAQL 485

Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRIS 310
           QKI +V+    +  ++IR + D          N +L+  R+ + Y  L+    + + R+ 
Sbjct: 486 QKICDVIKRCKDAKLTIRTYND----GPADAKNMKLATARSAAVYNFLLSKKCIDKSRL- 540

Query: 311 KISGFAHHRLKIA 323
              G A      A
Sbjct: 541 AYEGAADEDPTNA 553


>gi|253572376|ref|ZP_04849779.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|251838151|gb|EES66239.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
          Length = 68

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIAS 324
           +S+ G+ D       AR N +LS  RA +  + L   G++ DRI  ++      +    +
Sbjct: 1   MSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY--N 55

Query: 325 DPMNSANRRIDILV 338
            P      R+ I +
Sbjct: 56  TPEE---NRVSICI 66


>gi|88858356|ref|ZP_01132998.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
 gi|88819973|gb|EAR29786.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
          Length = 247

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS         L ++  VLA + +  + ++G  D        + N  LS  R  + 
Sbjct: 132 FRSGSSAIEAHFASQLDEVAAVLAQNPDLSLDLQGFADRR---GDEQANLILSKQRVTNV 188

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342
              L+K GV+  R++    F       A         +RR+ +  ++ Q
Sbjct: 189 KAYLVKQGVNAVRLNT-DAFGEQHALAAQQDFEGDFFDRRVTLKAKNNQ 236


>gi|217077698|ref|YP_002335416.1| motility protein B [Thermosipho africanus TCF52B]
 gi|217037553|gb|ACJ76075.1| motility protein B [Thermosipho africanus TCF52B]
          Length = 288

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265
           +++     V  E    G LI+I D     +F+  S+    E   +L+K+G V+   T  V
Sbjct: 87  ISEEYKGKVTVEERDEGTLITISDLD---IFNPGSARLTAEAKKLLEKLGAVIIEHTTNV 143

Query: 266 ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300
           + I G+ +  P    +I + NW LS  RA S      
Sbjct: 144 LEIYGYANEIPVPENSIYQSNWHLSSARASSVVYFFT 180



 Score = 39.2 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 45/132 (34%), Gaps = 1/132 (0%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS- 80
              + P     W   Y D +T+L+ FF++++ +++      + +             +  
Sbjct: 3   KKQECPKGAPLWMTTYGDMVTLLLTFFVLLFAMSSISPGKFQQVAVGLTSALNGNPPSVL 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G    Q  P  S    +   I +   +    + +   ++       + +IF   +++ +
Sbjct: 63  TGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVEERDEGTLITISDLDIFNPGSARLT 122

Query: 141 EHCKNSLTRDSE 152
              K  L +   
Sbjct: 123 AEAKKLLEKLGA 134


>gi|317504762|ref|ZP_07962722.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606]
 gi|315664144|gb|EFV03851.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606]
          Length = 389

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 7/195 (3%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDS--EKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +   N +    +  +     NS       +K   L     L   + K      P +   K
Sbjct: 180 EAGWNRMEDNFDGNEMAQLSNSHHGRGWEDKDNHLYAEIGLTFKLGKATWNKTPDVDAIK 239

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L+  +   L      +++  +G +   + +          +    +    +  F+    
Sbjct: 240 ALSQSQIDALNSQLNDLNAE-NGKLRKELAEKPKTTVLTKSLK-EFVATPISVFFNIGKI 297

Query: 243 IPLP-ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                + +V ++ + +    +   I + G+ D+S        N RLS  RA +  + L+K
Sbjct: 298 DVALLKDLVNVRALAKYAIENNSHILVTGYADSS--TGTPAINQRLSEQRANTIVEELVK 355

Query: 302 SGVSEDRISKISGFA 316
            GV+   I   +G  
Sbjct: 356 MGVNRSNIRTAAGGG 370


>gi|73746013|ref|YP_302605.1| outer membrane protein precursor [Sphingomonas sp. A1]
 gi|72534579|dbj|BAE19699.1| Upf30.5 [Sphingomonas sp. A1]
          Length = 155

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292
             F  SS+   P+         E+LA +    +I + G T              L+L RA
Sbjct: 51  VSFPDSSTTFRPDAST-----AELLAEAKGAAIIYVSGRTSTLRPSAADE---ALALRRA 102

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA Q L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 103 LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRYQNQRVDIEV 149


>gi|237751947|ref|ZP_04582427.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376514|gb|EEO26605.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 252

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 52/185 (28%), Gaps = 24/185 (12%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              L   + E     ++   +    + +  TL   +     K +           ++  +
Sbjct: 37  QKQLALQNAELKELNRQMSDIAKTHEDLKITLHKDLLAEFSKNLESWNAEIDADNTVRFR 96

Query: 232 RNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASP-----F 277
               +FD            +L             E   +  E I I GHT          
Sbjct: 97  EPEILFDSGKKEVKTRFQEILDDFFPRYIKILTQEKYKNDIEEIRIEGHTSTEWQNAKTL 156

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSED------RISKISGFAHHRLKIASDPMNSAN 331
            +    N  LS  RA    +    + V +       ++ + +G +  +     +     +
Sbjct: 157 ESRYLGNAELSQARALEVLKYCFSNPVIKADKQWLIKVLRANGLSFAKPL---ETAE-LS 212

Query: 332 RRIDI 336
           RR++ 
Sbjct: 213 RRVEF 217


>gi|224418158|ref|ZP_03656164.1| hypothetical protein HcanM9_02663 [Helicobacter canadensis MIT
           98-5491]
 gi|253827485|ref|ZP_04870370.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510891|gb|EES89550.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 263

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 24/190 (12%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
              L   + E +   K+   +    + + + L   +     K +           ++  +
Sbjct: 40  QKELALQNAELLALNKQMSDVAKTHQNLQTELYKDLVAEFSKDLGKWNAEIDEDNTVRFR 99

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTD-----ASPF 277
               +FD+           +L                    E I I GHT      A   
Sbjct: 100 EPDILFDQGEKEVKSRFKEILDDFFPRYIKILSRPQYKEDIEEIRIEGHTSKEWKNAKSL 159

Query: 278 RNIARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKIASDPMNSAN 331
            +    N  LS  RA    +       +++ +     + + +G +  +   +++     +
Sbjct: 160 EDRYLGNAELSQARALEVLKYCFNNQQIAKQKEWLVSVLRANGLSFAKPLESAE----LS 215

Query: 332 RRIDILVEDR 341
           RR++  V  +
Sbjct: 216 RRVEFKVLTK 225


>gi|320190585|gb|EFW65235.1| hypothetical protein ECoD_02000 [Escherichia coli O157:H7 str.
           EC1212]
 gi|326345387|gb|EGD69130.1| hypothetical protein ECF_01276 [Escherichia coli O157:H7 str. 1125]
 gi|326346758|gb|EGD70492.1| hypothetical protein ECoA_01138 [Escherichia coli O157:H7 str.
           1044]
          Length = 206

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                     + +    L  + +  L    A+   + +        +L  +      P F
Sbjct: 23  KEVAVAYENAQLQLYNALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 82

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292
                   P  + VL    E +        I GHT               +N  LS  R 
Sbjct: 83  KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 138

Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338
            +  Q +     ++  +          G++     +      DP  S  RR+   V
Sbjct: 139 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 192


>gi|156932816|ref|YP_001436732.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|156531070|gb|ABU75896.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 246

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
          IKK+   +        W I YAD MT +M  FLV+ + + +    +    + 
Sbjct: 8  IKKRRGDEAEK---PFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQKAEQ 55


>gi|150021176|ref|YP_001306530.1| flagellar motor protein-like protein [Thermosipho melanesiensis
           BI429]
 gi|149793697|gb|ABR31145.1| Flagellar motor protein-like protein [Thermosipho melanesiensis
           BI429]
          Length = 288

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265
           +++     V  +    G LI+I D     +F+  S+    E   +L+K+G V+   T  V
Sbjct: 87  ISEEYKGKVTVQEKDEGTLITISDLD---IFEPGSARLTAEAKRLLEKLGTVIIEHTTNV 143

Query: 266 ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300
           + I G  +  P    +I   NW LS  RA S      
Sbjct: 144 LEIYGFANEIPLPESSIYFSNWHLSSARAASVVLFFT 180



 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 1/131 (0%)

Query: 22  AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS- 80
              + P     W   Y D +T+L+ FF++++ +++      + +             +  
Sbjct: 3   KKQECPKGAPLWMTTYGDMVTLLLTFFVLLFAMSSISPGKFQQVAVGLTSALNGNPPSVL 62

Query: 81  KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140
            G    Q  P  S    +   I +   +    + +   ++       + +IF   +++ +
Sbjct: 63  TGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVQEKDEGTLITISDLDIFEPGSARLT 122

Query: 141 EHCKNSLTRDS 151
              K  L +  
Sbjct: 123 AEAKRLLEKLG 133


>gi|172061805|ref|YP_001809457.1| cytochrome c oxidase subunit II [Burkholderia ambifaria MC40-6]
 gi|171994322|gb|ACB65241.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria MC40-6]
          Length = 535

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 19/165 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L  +++   +  K  +D A   +   +         G   ++             +T  F
Sbjct: 380 LQPKQVADARNGKMPEDAAGAAAPAEAASAPAQAASGAAEQSAAASAAAPASTALSTVYF 439

Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +   S +P      +        AH    +++ G TD +     A  N  L+  RA    
Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQVVR 496

Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
             L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531


>gi|307728349|ref|YP_003905573.1| cytochrome c oxidase subunit II [Burkholderia sp. CCGE1003]
 gi|307582884|gb|ADN56282.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1003]
          Length = 552

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 19/111 (17%)

Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
             +  FD   S++P      V        AH     ++ G TDA+     A  N +L+  
Sbjct: 447 PASVYFDTGKSTLPADAKAAVEAAAAYAKAHPDAKFTLSGFTDAT---GSADTNAKLAKS 503

Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           RA +    L  +G++ED I       I+G         SD   +  RR+ I
Sbjct: 504 RAEAVRDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 544


>gi|115352953|ref|YP_774792.1| cytochrome c oxidase subunit II [Burkholderia ambifaria AMMD]
 gi|115282941|gb|ABI88458.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria AMMD]
          Length = 535

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 19/165 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
           L  +++   +  K  +D A   +   +         G   ++             +T  F
Sbjct: 380 LQPKQVADARNGKMPEDTAGAAAPAEAASAPAQAASGAAEQSAAASAAAPASTALSTVYF 439

Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           +   S +P      +        AH    +++ G TD +     A  N  L+  RA    
Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQVVR 496

Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
             L  +GV+ED I       I+G A  +         +  RR++I
Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531


>gi|323524639|ref|YP_004226792.1| cytochrome c oxidase subunit II [Burkholderia sp. CCGE1001]
 gi|323381641|gb|ADX53732.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1001]
          Length = 547

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 77/286 (26%), Gaps = 26/286 (9%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
            D   KK      +P     M        +      +  ++                   
Sbjct: 274 VDAQKKKMAAGQDDPNKTYTMAELMERGGKVYAANCAVCHQPTGKGAGAFPALDGSKIAN 333

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
               +     L+      S +      + +     E+      + D+ +     +     
Sbjct: 334 GPIAEHVSLVLKGKNAMPSWAPTLNDVEIASVVTFERNSWGNHTGDILQPKQVADARNGK 393

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
                  LA            + +S  +   A +             +  SI        
Sbjct: 394 LPEGGNHLADAGAAVSDASGAQAASGGAASEASSAQAAAAGSEGAAALPASIY------- 446

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S++P      V        AH     ++ G TDA+     A  N +L+  RA + 
Sbjct: 447 FETGKSTLPADAKAAVEAAAAYAKAHPDAKFALSGFTDAT---GSADTNAKLAKSRAEAV 503

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +G++ED I       I+G         SD   +  RR+ I
Sbjct: 504 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 539


>gi|294782117|ref|ZP_06747443.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA]
 gi|294480758|gb|EFG28533.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA]
          Length = 232

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 37/190 (19%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            ++K+K       K  ++  + I   L+    +++ +            +SI  +     
Sbjct: 35  QVNKQKEHIEVIAKDFRNTKQSIYKDLNKEFEEDLKRW---NAYIDKDTLSITFKEPDVF 91

Query: 237 FDKSSSIP--------LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-----ARD 283
           FD  SS                 ++ + +      E I I GHT +   ++         
Sbjct: 92  FDVGSSEINSNFKLILKDFFPRYIEMLYKNYRDEIEEIRIEGHTSSEWNKDDDDLQAYFK 151

Query: 284 NWRLSLDRAYSA-------------YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329
           N  LS  R+ S                 L++        +  +G ++    I +   N +
Sbjct: 152 NMSLSQARSKSVLEYCMLLDSMEEYRDFLIEK-------ATANGLSYSHRIIENGKENYN 204

Query: 330 ANRRIDILVE 339
            +RR++  ++
Sbjct: 205 KSRRVEFKIK 214


>gi|302383729|ref|YP_003819552.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302194357|gb|ADL01929.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 242

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 60/210 (28%), Gaps = 13/210 (6%)

Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
               + ++       +    ++    + +     ++      + +   S     +   ++
Sbjct: 21  WPAAAQTRSVCFEPGTAQLTADAYAAVREVGLEMQTGPGRWPHAVLGGSVADDGSALDRE 80

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSI 243
           R+  +  ++     G+    I            + +   D     +       F +  + 
Sbjct: 81  RVDQVLLELVRVGVGVGRVKIEPIPSPSAHCVPLDVGQDDPPYYALWHFWPLFFPEGGTE 140

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              +    ++ I         V  ++G+ D       A  +  +S  RA +    L++ G
Sbjct: 141 VASDGARRMRFIVADYQPGQTVYRVQGYADT---AGSAAASMAVSRRRADNVASELIRQG 197

Query: 304 VSEDRISKISGFAHHRLK--IASDPMNSAN 331
           V  D I  +  F   RL            N
Sbjct: 198 VRWDDIV-VEAFGETRLARPTPDGTGEPLN 226


>gi|167835314|ref|ZP_02462197.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis
           MSMB43]
          Length = 117

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 19/106 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+   S    +    +    E +    +  +++ G TD +     A  N  L+  RA + 
Sbjct: 21  FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELARRRAQAV 77

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +GV+++RI       I+G A  +         +  RR++I
Sbjct: 78  RDALKTAGVAQERIILKKPETITGGADAK--------EA--RRVEI 113


>gi|60683246|ref|YP_213390.1| hypothetical protein BF3801 [Bacteroides fragilis NCTC 9343]
 gi|60494680|emb|CAH09481.1| putative exported protein [Bacteroides fragilis NCTC 9343]
          Length = 616

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E++  L++    +       +   G  D          N+ LS  RA S 
Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556

Query: 296 YQVLMKSGVS 305
            + L   G++
Sbjct: 557 AEFLRNHGLN 566


>gi|325068013|ref|ZP_08126686.1| OmpA/MotB domain protein [Actinomyces oris K20]
          Length = 336

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 65/245 (26%), Gaps = 13/245 (5%)

Query: 58  DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP----PERSSQNKIDLSIDEHITKNSVDL 113
           DD   K +    N  G N+  A + +  +       P       +DL  +      +   
Sbjct: 99  DDAAVKEVSDSLNDHGSNVFEADRPLTRQGGNRTYRPAAGGVRLLDLPTNRVWLATTGVE 158

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
           +    N                    +   K       + G       D   +     ++
Sbjct: 159 QTSKDNYANTIALKPGETTTCFVLFGAVDTKQVTVFVPQAGFVTVNVLDSSAAAASGIDF 218

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                + + +++  R +  + +    +          +            + +++     
Sbjct: 219 KAVDKAFDDVISYSRDES-KPIQALAAPAPIERYTQALDDSTSTLADNQKVTVTLASDVT 277

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291
              F   S+   P     L+ +   LA       +SI GHTD          N  LS  R
Sbjct: 278 ---FASDSADLAPAADAQLKTVAGQLAQYPDGGTLSIVGHTDDVQ---DDAYNQTLSEKR 331

Query: 292 AYSAY 296
           A +  
Sbjct: 332 ANAVK 336


>gi|261417369|ref|YP_003251052.1| Thrombospondin type 3 repeat protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373825|gb|ACX76570.1| Thrombospondin type 3 repeat protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327349|gb|ADL26550.1| thrombospondin type 3 repeat protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 708

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 60/229 (26%), Gaps = 4/229 (1%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           N P   + NK    +D        +      +   +   +             +      
Sbjct: 457 NTPAGLTVNKYGCFLDRDRDGVPDEWDKCPDSAPNEIVNMYGCPIDSDEDGIPDFMDKCT 516

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
              +    D              +     P + E     K+   L      +   L    
Sbjct: 517 NTPAGVKVDSIGCRLDFDGDGVFDEEDKCPDTPENAPVDKQGCPLDSDKDGVFDYLDNCP 576

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267
                  V          +++        F K +  PL  +   L  +  V+        
Sbjct: 577 NTLERTEVDVNGCPIREKLNLDKIARRIQFHKGTDKPLNSSYTALSDVVSVMR---HNKQ 633

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           I      S     ++D   LS  RA   Y+ ++  G+ E+++ + +GF 
Sbjct: 634 IAIEIQCSVKPGESKDPQALSDARATMVYEFIVNKGIKEEKL-RANGFG 681


>gi|183221921|ref|YP_001839917.1| hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167780343|gb|ABZ98641.1| Hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 125

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 9/105 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295
           F K S++     +V LQ + + L  +        H DA         +N  +S  R+   
Sbjct: 23  FAKKSNLIPKPDLVRLQTVADFLNRNRNY---EIHIDAHAVEGKNNEENIMISEKRSLEV 79

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338
            + L+   V  ++I ++  + + +    +      + NRR++I +
Sbjct: 80  ERFLLIHFVEPNQIRRLF-YGNTK--SPNQTKEHEALNRRVEIQL 121


>gi|53715312|ref|YP_101304.1| hypothetical protein BF4028 [Bacteroides fragilis YCH46]
 gi|253567202|ref|ZP_04844652.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265767798|ref|ZP_06095330.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52218177|dbj|BAD50770.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|251944033|gb|EES84552.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263252470|gb|EEZ23998.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301164765|emb|CBW24324.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 616

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E++  L++    +       +   G  D          N+ LS  RA S 
Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556

Query: 296 YQVLMKSGVS 305
            + L   G++
Sbjct: 557 AEFLRNHGLN 566


>gi|332883495|gb|EGK03778.1| hypothetical protein HMPREF9456_01845 [Dysgonomonas mossii DSM
           22836]
          Length = 235

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 7/102 (6%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290
            N   F  +  +        ++     L        +  G+ D       A+ N +LS  
Sbjct: 130 PNPVFFRINKYVIDASEWSKIELAVNYLNEHPGSTVVVTGYADKK--TGTAKINMKLSEQ 187

Query: 291 RAYSAYQVL-MKSGVSEDRISKISGFAHH-RLK-IASDPMNS 329
           R+    + L  K G++++RI  ++      +   + +D   +
Sbjct: 188 RSNEVAKALETKYGIAKNRI-SVNWKGDGLQPFQLENDKNRA 228


>gi|167722111|ref|ZP_02405347.1| hypothetical protein BpseD_24069 [Burkholderia pseudomallei DM98]
          Length = 351

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290
           R   MF   ++   P    +++KI   +A     +++RG+TD  P ++     N  LS +
Sbjct: 285 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 344

Query: 291 RAYSAYQ 297
           RA    Q
Sbjct: 345 RATQVMQ 351


>gi|327399255|ref|YP_004340124.1| PA14 domain-containing protein [Hippea maritima DSM 10411]
 gi|327181884|gb|AEA34065.1| PA14 domain protein [Hippea maritima DSM 10411]
          Length = 554

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 12/87 (13%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
           R   +F++ S    PE I VL KI +++    + I+I G  D             LS DR
Sbjct: 471 RRGVLFEEYSDRLKPEGIKVLMKIKKLIGEKYKSINIYGRDD------------ELSKDR 518

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH 318
             S   +L+  G+   RI K  G    
Sbjct: 519 IKSIVNMLVGFGIDPSRIRKYYGLGDS 545


>gi|294789473|ref|ZP_06754709.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453]
 gi|294482553|gb|EFG30244.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453]
          Length = 179

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 18/114 (15%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
             D      F   SS    + I  +         S + + I G+TD +     A  N +L
Sbjct: 76  YEDGIVKIYFAVGSSKI-AKNIQTVSNQIIDAGKSGKKLIISGYTDGT---GSATTNAKL 131

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSAN----RRIDI 336
           +  RA +    L+K  VS   I          L+  ++    + N    RR+DI
Sbjct: 132 AKQRAEAVKAFLVKQNVSAANI---------ELRKPNNTIGAAGNHVEGRRVDI 176


>gi|255011757|ref|ZP_05283883.1| hypothetical protein Bfra3_21635 [Bacteroides fragilis 3_1_12]
 gi|313149595|ref|ZP_07811788.1| OmpA family protein [Bacteroides fragilis 3_1_12]
 gi|313138362|gb|EFR55722.1| OmpA family protein [Bacteroides fragilis 3_1_12]
          Length = 616

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD  S     E++  L++    +       +   G  D          N+ LS  RA S 
Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556

Query: 296 YQVLMKSGVS 305
            + L   G++
Sbjct: 557 AEFLRNHGLN 566


>gi|251733485|emb|CAR82492.1| pal [Sinorhizobium kostiense]
 gi|251733487|emb|CAR82493.1| pal [Sinorhizobium kostiense]
 gi|251733489|emb|CAR82494.1| pal [Sinorhizobium kostiense]
          Length = 87

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLISRGVPANRMRTIS-YGKEKPVA 81


>gi|294787779|ref|ZP_06753023.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453]
 gi|294484072|gb|EFG31755.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453]
          Length = 214

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 28/118 (23%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL------------AHSTEVISIRGHTDASPFRNIARDN 284
           F+   ++  PE   +L ++  V                   + + GHTD+         N
Sbjct: 85  FESGKAVLKPEGKAILDQLMPVFAKAVFDELSGEQQEEITRLIVEGHTDSV---GSYASN 141

Query: 285 WRLSLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLKIASDPMNSANRRI 334
            +LS +RA +     + + + +         +++ + G   +    AS   N A+RR+
Sbjct: 142 MQLSTERANAVLSY-IDTQMPDFPHKAELLAKMTAV-GRGEN---DASPTENPADRRV 194


>gi|221067138|ref|ZP_03543243.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
 gi|220712161|gb|EED67529.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
          Length = 174

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
              V+      V          + + +      F    +         L  + + +A   
Sbjct: 47  EAAVSAPSATNVPVVVIEETARVIVENGVVKFYFVSGKAEVAAGANEALSDVVKGVAE-G 105

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           +   I G  DA+     A  N  L+  RA +    LM  GV+ED++         + +  
Sbjct: 106 KRALISGFHDAT---GSAEINAELAKQRAQAVQAALMALGVAEDKVELKK---PEQTQAD 159

Query: 324 SDPMNSANRRIDILV 338
                +  RR+++++
Sbjct: 160 GSNAEA--RRVEVIL 172


>gi|154250209|ref|YP_001411034.1| motility protein B [Fervidobacterium nodosum Rt17-B1]
 gi|154154145|gb|ABS61377.1| motility protein B [Fervidobacterium nodosum Rt17-B1]
          Length = 290

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265
           +++     +  E    G LI++    N  +F+ +S+    E   +++K+G V+   T  +
Sbjct: 88  ISEEYKGKITIEDKDEGTLITLT---NFKIFEPASARLTAEAKEIIEKLGAVIIEHTSNI 144

Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVL 299
           I +RG+ D  P    +I   NW LS  RA +    +
Sbjct: 145 IEVRGYADDRPLTPDSIYPSNWHLSSARASTVVNFM 180


>gi|332520733|ref|ZP_08397195.1| hypothetical protein LacalDRAFT_1808 [Lacinutrix algicola 5H-3-7-4]
 gi|332044086|gb|EGI80281.1| hypothetical protein LacalDRAFT_1808 [Lacinutrix algicola 5H-3-7-4]
          Length = 234

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 53/189 (28%), Gaps = 43/189 (22%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
            +     L   +   +   V +    G +    +T         ++  +F         E
Sbjct: 43  EQDIYNSLELNLKQEIENEVIELSPDGTVKFNLQT---------KDKELFPSDRYTMTYE 93

Query: 248 TIVVLQ-KIGEVLA--------HSTEVISIRGHTDASPFR-----NIARDNWRLSLDRAY 293
               L     + L         ++   + I GHTD  P R     +    N  LS +RA 
Sbjct: 94  FEKTLNEFTPKYLKIITASNYLNNISEVRIEGHTDTIPPRRSRNRDSYDYNLELSSNRAR 153

Query: 294 SAYQVLMKS----GVSED---R---ISKISGFAHHRLKIASDP----------MNSANRR 333
           S    +          +    R   +   +G ++ R   +              N  +RR
Sbjct: 154 SVLNYIRNHESYLNYPDSIKTRLDFLFTANGLSYSRALNSGKEVSYLSSDKSVDNDLSRR 213

Query: 334 IDILVEDRQ 342
           ++  +    
Sbjct: 214 VEFKIVTSN 222


>gi|298369577|ref|ZP_06980894.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282134|gb|EFI23622.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 159

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +  +  +A+  +S           +      +     + + +      F    S      
Sbjct: 18  QAVVNGMAENSASETVAPADVAPAEASASMPSENEAAVVVENGIVKFYFASGKSDLAAGA 77

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
              L+ +   +    +   + G  D +        N  LS  RA++    LM  GV+E++
Sbjct: 78  EDALKDVLAGVKA-GKKAVVSGFHDKT---GNQALNEELSKQRAFAVKNALMGLGVAENQ 133

Query: 309 ISKISGFAHHRLKIASDPMN-SANRRIDILVE 339
           I         +   +    + +  RR+++++E
Sbjct: 134 IEL------RKPSDSEGSGSKAEARRVEVVLE 159


>gi|170021864|ref|YP_001726818.1| hypothetical protein EcolC_3889 [Escherichia coli ATCC 8739]
 gi|169756792|gb|ACA79491.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
          Length = 235

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 27/180 (15%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
           EK    +     ++   +I + L    A ++      E  +  + +         +F   
Sbjct: 47  EKEKIKEVAVAYENAQLQIYNALDIEFAKDLQDW-DAEIDKQTLEVRFKSPD--VLFGLG 103

Query: 241 SSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLS 288
           S+   P+  ++L           +        + I GHT               +N  LS
Sbjct: 104 STELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTSTDWTGTTNPDIAYFNNMALS 163

Query: 289 LDRAYSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338
             R  +  Q +     ++  +          G++     +      DP  S  RR+   V
Sbjct: 164 QGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221


>gi|253569364|ref|ZP_04846774.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251841383|gb|EES69464.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 381

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            + L+ + +++ +                + T   +  +I+       F  S      E 
Sbjct: 234 DEELRLMREQLKAMNDENNRLKDELATSNKVTERVVETNILSAPYLVTFQISRYALSNEA 293

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
            V +    +++  +   V +I G+ D          N  LS  RA + Y  L+   GV  
Sbjct: 294 RVNIGFQAKIMKENKNAVYTIIGYAD--KGTGTKEFNQFLSKARAEAVYNCLVNEFGVPA 351

Query: 307 DRI 309
            ++
Sbjct: 352 SQL 354


>gi|29348270|ref|NP_811773.1| putative outer membrane protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340173|gb|AAO77967.1| putative outer membrane protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 396

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            + L+ + +++ +                + T   +  +I+       F  S      E 
Sbjct: 249 DEELRLMREQLKAMNDENNRLKDELATSNKVTERVVETNILSAPYLVTFQISRYALSNEA 308

Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
            V +    +++  +   V +I G+ D          N  LS  RA + Y  L+   GV  
Sbjct: 309 RVNIGFQAKIMKENKNAVYTIIGYAD--KGTGTKEFNQFLSKARAEAVYNCLVNEFGVPA 366

Query: 307 DRI 309
            ++
Sbjct: 367 SQL 369


>gi|331665946|ref|ZP_08366840.1| hypothetical protein ECMG_03823 [Escherichia coli TA143]
 gi|331056997|gb|EGI28991.1| hypothetical protein ECMG_03823 [Escherichia coli TA143]
          Length = 159

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 24/135 (17%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFR 278
           + +  +    +F   S+   P+  ++L           +        + I GHT      
Sbjct: 13  LEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTSTDWTG 72

Query: 279 N-----IARDNWRLSLDRAYSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA---- 323
                    +N  LS  R  +  Q +     ++  +          G++     +     
Sbjct: 73  TTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGK 132

Query: 324 SDPMNSANRRIDILV 338
            DP  S  RR+   V
Sbjct: 133 EDPNRS--RRVTFKV 145


>gi|327403395|ref|YP_004344233.1| hypothetical protein Fluta_1401 [Fluviicola taffensis DSM 16823]
 gi|327318903|gb|AEA43395.1| hypothetical protein Fluta_1401 [Fluviicola taffensis DSM 16823]
          Length = 547

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 16/115 (13%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             +       L +    + K          + + + G  D++      R N+RLS  R+ 
Sbjct: 48  VYYPSGDYKLLDDNKQEIDKYIFSHNLRKIDSLHVIGFADST---GKKRLNFRLSRKRSE 104

Query: 294 SAYQVLMKSGV-SEDRISKISGFAHHR-LKIASDPMNSAN-RRIDILV--EDRQG 343
              + L+  G+     + +         L+  ++     N RR++I +  E ++G
Sbjct: 105 KVKEYLV--GILPPKTLVRSLAKGEENALRNPNE-----NHRRVEIHLFYEGKRG 152


>gi|206603228|gb|EDZ39708.1| Probable OmpA family protein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 232

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290
           +    F  +S       + VL     +L  +    + + GHTD       ++ N +L L+
Sbjct: 104 QKDIYFSFNSKKISYANLSVLHAYSRLLRKNPRLALRLYGHTDPV---GGSKFNHKLGLE 160

Query: 291 RAYSAYQVLMKSGVSEDRIS 310
           RA +A +VL+ +GV   RI 
Sbjct: 161 RALAARRVLLATGVPAKRIF 180


>gi|146342455|ref|YP_001207503.1| hypothetical protein BRADO5614 [Bradyrhizobium sp. ORS278]
 gi|146195261|emb|CAL79286.1| hypothetical protein BRADO5614 [Bradyrhizobium sp. ORS278]
          Length = 247

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 10/100 (10%)

Query: 237 FDKSSSIPLP-ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           F++ S+ P P +    L  + + L+   +  + + GH DA         N  LS  RA +
Sbjct: 134 FERGSTRPNPADMKRALSILPKALSRHADATLLVEGHADA---NGSEDLNVLLSFSRAKA 190

Query: 295 AYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRR 333
             ++L K G+   ++  + +G          D   +A+ R
Sbjct: 191 VAELLKKDGIPAQQLAVRAAGAG----TARGDTEAAADDR 226


>gi|300928437|ref|ZP_07143969.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300463554|gb|EFK27047.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 235

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                     + +    L  + +  L    A+   + +        +L  +      P F
Sbjct: 52  KEVAVAYENAQLQLYNALDIEFAKDLKDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 111

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292
                   P  + VL    E +        I GHT               +N  LS  R 
Sbjct: 112 KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 167

Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338
            +  Q +     ++  +          G++     +      DP  S  RR+   V
Sbjct: 168 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221


>gi|15804874|ref|NP_290915.1| hypothetical protein Z5895 [Escherichia coli O157:H7 EDL933]
 gi|15834511|ref|NP_313284.1| hypothetical protein ECs5257 [Escherichia coli O157:H7 str. Sakai]
 gi|168749548|ref|ZP_02774570.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754862|ref|ZP_02779869.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760537|ref|ZP_02785544.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766571|ref|ZP_02791578.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773999|ref|ZP_02799006.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168782807|ref|ZP_02807814.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168784934|ref|ZP_02809941.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168797862|ref|ZP_02822869.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|170680753|ref|YP_001746734.1| hypothetical protein EcSMS35_4823 [Escherichia coli SMS-3-5]
 gi|195937305|ref|ZP_03082687.1| hypothetical protein EscherichcoliO157_12775 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208805799|ref|ZP_03248136.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812352|ref|ZP_03253681.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821526|ref|ZP_03261846.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396899|ref|YP_002273822.1| hypothetical protein ECH74115_5802 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325545|ref|ZP_03441629.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254796300|ref|YP_003081137.1| hypothetical protein ECSP_5382 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261226603|ref|ZP_05940884.1| hypothetical protein EscherichiacoliO157_18722 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256954|ref|ZP_05949487.1| hypothetical protein EscherichiacoliO157EcO_14173 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285682|ref|YP_003502500.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12519300|gb|AAG59481.1|AE005660_2 hypothetical protein Z5895 [Escherichia coli O157:H7 str. EDL933]
 gi|13364735|dbj|BAB38680.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|170518471|gb|ACB16649.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|187770296|gb|EDU34140.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016168|gb|EDU54290.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|188999800|gb|EDU68786.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357848|gb|EDU76267.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364307|gb|EDU82726.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368928|gb|EDU87344.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374962|gb|EDU93378.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379550|gb|EDU97966.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208725600|gb|EDZ75201.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733629|gb|EDZ82316.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741649|gb|EDZ89331.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158299|gb|ACI35732.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217321766|gb|EEC30190.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254595700|gb|ACT75061.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
 gi|290765555|gb|ADD59516.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str.
           CB9615]
 gi|320639026|gb|EFX08672.1| hypothetical protein ECO5101_17161 [Escherichia coli O157:H7 str.
           G5101]
 gi|320644396|gb|EFX13461.1| hypothetical protein ECO9389_14588 [Escherichia coli O157:H- str.
           493-89]
 gi|320649714|gb|EFX18238.1| hypothetical protein ECO2687_22184 [Escherichia coli O157:H- str. H
           2687]
 gi|320660616|gb|EFX28077.1| hypothetical protein ECO5905_14943 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320665544|gb|EFX32590.1| hypothetical protein ECOSU61_14616 [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 235

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
                     + +    L  + +  L    A+   + +        +L  +      P F
Sbjct: 52  KEVAVAYENAQLQLYNALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 111

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292
                   P  + VL    E +        I GHT               +N  LS  R 
Sbjct: 112 KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 167

Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338
            +  Q +     ++  +          G++     +      DP  S  RR+   V
Sbjct: 168 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221


>gi|311695658|gb|ADP98531.1| OmpA family protein-like protein [marine bacterium HP15]
          Length = 202

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 20/185 (10%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++ + +   + +   P +          +   +     I S    L           +  
Sbjct: 29  SESDSADMIDRSVQGPDMGALNARLANLEALQKQNVDAIKSLSERLDRFEAAICRGDDCG 88

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           R  ++      R T +F  + S    +    + ++ E +     +IS+RG  DA      
Sbjct: 89  RRMLI------RETVLFALNDSTLSEQAKDRINRLMEGVKE-GALISLRGQADAL---GD 138

Query: 281 ARDNWRLSLDRAYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RR- 333
              N+ LSL RA +  Q     L +SG + D +  I G       ++     S N  RR 
Sbjct: 139 EIYNYLLSLRRAAAVKQYLDTLLAESGQTGDLLITIDGTGEA---LSGGSDESENPARRM 195

Query: 334 IDILV 338
           ++IL+
Sbjct: 196 VEILI 200


>gi|262377779|ref|ZP_06070996.1| small protein A [Acinetobacter lwoffii SH145]
 gi|262307288|gb|EEY88434.1| small protein A [Acinetobacter lwoffii SH145]
          Length = 262

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 15/109 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD+S++  + +    +  I E +  S     I++ G  D          N +LS  RA +
Sbjct: 154 FDRSNANAIEQGSSSVAAIAERIKQSNSTGPITVAGFADPL---GKFSYNHQLSAQRANT 210

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN------SANRRI 334
             ++L+  G+  +RI +I   +   L      +   N      + NRR+
Sbjct: 211 VAKLLVNEGIDVNRI-QIQANSQTDLYQQCAGNKANNRLVGCLAPNRRV 258


>gi|83746859|ref|ZP_00943906.1| Cytochrome c oxidase polypeptide II [Ralstonia solanacearum UW551]
 gi|207742207|ref|YP_002258599.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2
           oxidoreductase protein [Ralstonia solanacearum IPO1609]
 gi|83726444|gb|EAP73575.1| Cytochrome c oxidase polypeptide II [Ralstonia solanacearum UW551]
 gi|206593595|emb|CAQ60522.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2
           oxidoreductase protein [Ralstonia solanacearum IPO1609]
          Length = 525

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS--INKEENYF 174
             N K        +   ++N   ++H    L              D+E +  I  E N +
Sbjct: 307 QPNGKGGGPFPALDGSKIANGPLADHVGIVLHGKGAMPPWASALNDVEIASVITYERNNW 366

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
               +        ++ R   + +          A    +                     
Sbjct: 367 GNHTNDVLQPTQVKEARGGKMPEGGGHLAGAGAAAPAPEAASASAASGNAAAGAATLPAN 426

Query: 235 PMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   S++P      V        AH     ++ G TD +     A  N +L+  RA 
Sbjct: 427 VYFDTGKSTLPADAKAAVDAAAAYAKAHPDAKFTVSGFTDTT---GSADLNAKLAKSRAQ 483

Query: 294 SAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           +    L  +G++ED I       I+G A        +   +  RR+ I
Sbjct: 484 AVRDALKAAGIAEDHIVLKKPETITGGA--------NAKEA--RRVQI 521


>gi|207727804|ref|YP_002256198.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2
           protein [Ralstonia solanacearum MolK2]
 gi|206591045|emb|CAQ56657.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2
           protein [Ralstonia solanacearum MolK2]
          Length = 527

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 19/111 (17%)

Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                FD   S++P               AH     ++ G TD +     A  N +L+  
Sbjct: 426 PANVYFDTGKSTLPADAKAAGDAAAAYAKAHPDAKFTVSGFTDTT---GSADLNAKLAKS 482

Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
           RA +    L  +G++ED I       I+G A        +   +  RR+ I
Sbjct: 483 RAQAVRDALKAAGIAEDHIVLKKPETITGGA--------NAKEA--RRVQI 523


>gi|254495834|ref|ZP_05108746.1| IcmN (DotK) [Legionella drancourtii LLAP12]
 gi|254354991|gb|EET13614.1| IcmN (DotK) [Legionella drancourtii LLAP12]
          Length = 189

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 14/146 (9%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
            +++   +     KGV   T     +ISI       +F+  +     +   +L ++   +
Sbjct: 50  DASIIKYIKKLRKKGVTVVTIGQDYMISIPAAY---LFEPQTPHIKWKAYKLLNEVAIFI 106

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWR---LSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
                   I  + D+  + +      R   L+L R+    + L   GV   R     G  
Sbjct: 107 KQ---FRKISIYIDS--YSSKYVSPQREHALTLARSRIVSEYLWSQGVD-SRFIFTQGLG 160

Query: 317 HHRLKIASDPMN--SANRRIDILVED 340
             +  IA  P    SAN R++I    
Sbjct: 161 SDKPIIAYTPGGDYSANARVEIKFRR 186


>gi|218674007|ref|ZP_03523676.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
          Length = 50

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341
           +   +L  SGV   ++    G A  +   A+D     +ANRRI+IL++ R
Sbjct: 1   TIASLLAASGVPTGQLKS-QGRAATQPLAANDSREGRAANRRIEILIQKR 49


>gi|319641322|ref|ZP_07996019.1| outer membrane protein [Bacteroides sp. 3_1_40A]
 gi|317387068|gb|EFV67950.1| outer membrane protein [Bacteroides sp. 3_1_40A]
          Length = 474

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPETIV-VLQKI 255
                  +    K +  E     ++  + D          F  +++     +    L ++
Sbjct: 338 KDKQNPDSLVSNKFITAEGHNPMVVNHVSDSCIGAPVYFFFTLNTARLTDVSQKLNLDEL 397

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS-- 313
             V       + + G  D+S     +  N  LS  RA      L + G+  +RI+KIS  
Sbjct: 398 ARVAKKYDLHVRVTGAADSS--TGTSGINDSLSQSRADFIVSELKQRGIPAERITKISRG 455

Query: 314 GFAHHRLKIAS 324
           G A H+   A+
Sbjct: 456 GIADHQPTEAN 466


>gi|292491142|ref|YP_003526581.1| hypothetical protein Nhal_1021 [Nitrosococcus halophilus Nc4]
 gi|291579737|gb|ADE14194.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
          Length = 237

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 23/166 (13%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q+    I   L      ++ +      + T   ++   Q    +F   S+        +L
Sbjct: 59  QENQVAIYEALMKEFEKDLERWDARIDSDT---LAFEFQSPEVLFATGSTEIRQRFKEIL 115

Query: 253 QKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVLM 300
                      +    S + I I GHT +              N  LS  R  S    + 
Sbjct: 116 ADFFPRYLVILKHYKDSIDEIRIEGHTSSVWNNQVSETEAYFLNMLLSQGRTRSVLHYVY 175

Query: 301 KS-GVSEDRI-----SKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +   V  DR          GF+  RL +    +   + +RR+   V
Sbjct: 176 ELPKVESDRGWVKRHFAAVGFSSSRLVLDDQGNEDRARSRRVSFRV 221


>gi|110589614|gb|ABG77309.1| outer membrane protein A [Acinetobacter baumannii]
          Length = 273

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              FD + S    +    + K+ E L+        I GHTD +      + N RLSL RA
Sbjct: 210 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 266

Query: 293 YSAYQVL 299
            S    L
Sbjct: 267 NSVKSAL 273


>gi|323455133|gb|EGB11002.1| hypothetical protein AURANDRAFT_71054 [Aureococcus anophagefferens]
          Length = 1595

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDI 336
             LS  RA +  Q ++  G+  DR+    GFA  R     +  + +   NRR+++
Sbjct: 651 MGLSTARADAVKQFILACGIEPDRVYA-QGFAGTRRLTGDVIDETVGHVNRRVEV 704


>gi|328473818|gb|EGF44653.1| hypothetical protein VP10329_14185 [Vibrio parahaemolyticus 10329]
          Length = 1592

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 100/316 (31%), Gaps = 33/316 (10%)

Query: 39  DFMTVLMAFFLVMWIINATDDDTKK-AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNK 97
           D MT  +A   + +  +A  +  K+ A    F   G ++  A+   F +           
Sbjct: 468 DLMTSSVA---LTFGFSAFKESRKELAKAITFANQGLDINQAAALAFRKS--------GM 516

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
               I   +      L  G+ ++             +                     DL
Sbjct: 517 NISFIKRELDVIKASLITGTFSENSTRLARSWFNGSVMEKMNRAFPILESGSSLVDLYDL 576

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
            +  +  +  + E       +S+  + ++   K  Q+ A+ +    + +   N       
Sbjct: 577 VQKENELEKKSLEAKEDFDAVSQSYLQSISVIKAYQEWAQALDDAKNLINGSNGESIAHI 636

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASP 276
              R G+ I I  + N   +         +   V Q + + +L + +  +SI GH     
Sbjct: 637 VEDRQGLAIHINFKFNEWQYGNEHGKLRTDIKQVCQNLAQLMLDNPSYKLSIEGHAGRI- 695

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPM------ 327
               +  N  ++  RA +    ++   +    E+R+   S + + +   A          
Sbjct: 696 --GSSDANDIVAAKRAKTVTNAIIS--IDSNLEERVYTAS-YGNTQPLTADGTKSDMSQT 750

Query: 328 -----NSANRRIDILV 338
                 + +RR+++ +
Sbjct: 751 GDSAPAALDRRVEVRL 766


>gi|319945500|ref|ZP_08019760.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Lautropia
           mirabilis ATCC 51599]
 gi|319741286|gb|EFV93713.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Lautropia
           mirabilis ATCC 51599]
          Length = 361

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 66/239 (27%), Gaps = 22/239 (9%)

Query: 86  EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145
              P    +Q +  L   E      V       + ++    L      L    +   C  
Sbjct: 99  GGFPRASLAQAQGILDQLEAGQNPDVSETPLVNDARRLRDDLWARHDRLRQDTEGMQCAA 158

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
                +E      +       I +       P  +      +  ++L    K      + 
Sbjct: 159 QRLACAE-----VELVHAGNEIRQGGWRHASPYIQIAEDLTEEAEKLAAQCKPKQVVSAP 213

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--- 262
           +    +   V+       + +     R         +  LPE    L    EVL      
Sbjct: 214 VEKPAVPAPVIEAPAMPTLDVRFRFDR------SGVADILPEDRQKLMDFAEVLKGHGPN 267

Query: 263 -TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI-SKISGFAHHR 319
             +V+ + GHTD          N RLS+ RA +    L + GV   R+  ++       
Sbjct: 268 EHQVLKLMGHTDRL---GNRAYNERLSMRRAVTVRDELQRLGV---RLPMEVRAMGATE 320


>gi|317404170|gb|EFV84613.1| OmpA family domain-containing protein [Achromobacter xylosoxidans
           C54]
          Length = 312

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             FD   +    E+   L ++G++L  + +  + + GHTD          N  LS  RA 
Sbjct: 217 VYFDTDKAEVKAESKAALDEMGKLLNANPKLKVYVVGHTDNQ---GTLAGNLELSQKRAD 273

Query: 294 SAYQVLMKS 302
           +  + L   
Sbjct: 274 AVVKALEAG 282


>gi|16751949|ref|NP_444533.1| TraP protein [Plasmid pIPO2T]
 gi|16610017|emb|CAC82763.1| TraP protein [Plasmid pIPO2T]
          Length = 186

 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 8/175 (4%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           + +      +   S    +       +  L  +++ +   L  +     +     +    
Sbjct: 15  ACSSPPKPPVVDGSNRHAINTPETAEVIALRAQLAQSEEKLRVEQARPVIAPTVLQPAPP 74

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
             +  +  +  F  + +         +Q +   L  +   I +RG TD            
Sbjct: 75  PPVRSRTFSVHFPYNDTNFHLSADDRVQLLP--LLANARRIEVRGRTDGQRPSTADE--- 129

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           +++L+RA +A + L+  GVS   I  ++  +       +      S NRR+DI V
Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183


>gi|167949297|ref|ZP_02536371.1| hypothetical protein Epers_23486 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 117

 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 3/33 (9%)

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDIL 337
           DR+    G+        +      + NRR++++
Sbjct: 17  DRLLA-RGYGEDHPVADNGTSEGRAKNRRVELI 48


>gi|330825361|ref|YP_004388664.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329310733|gb|AEB85148.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
          Length = 234

 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +S+   P     L+++   LA     I++ G TD++     A  N  L+  RA +  
Sbjct: 127 FPFASAQLGPSARAALREVAPRLAQ-ASEITLSGRTDST---GPAATNDGLAKARAQAVL 182

Query: 297 QVLMKS--GVSEDRISKISG---FAHHRLKIASDPMNSANRRIDI 336
           + L+     ++        G   +A       S    + NRR++I
Sbjct: 183 RQLLALSPAIAAHVSVDAQGTCCYAES---NDSPAGRANNRRVEI 224


>gi|284035432|ref|YP_003385362.1| hypothetical protein Slin_0499 [Spirosoma linguale DSM 74]
 gi|283814725|gb|ADB36563.1| hypothetical protein Slin_0499 [Spirosoma linguale DSM 74]
          Length = 445

 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 73/270 (27%), Gaps = 12/270 (4%)

Query: 65  IEQYFNPFGKNLMTASKGIFDEQNPPER-SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
           + + F P   + +   + +     P  R  +             + ++   +   +    
Sbjct: 166 VPESFMPQLVDKVGLHQIVAGAAGPARRTPADAPGKPVATAAPVRPTIAYDVADDSDSDN 225

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
               +  +  L     +           +      ++ DL    +          S    
Sbjct: 226 GALTKWGVGILVALALAFGGYYLYQNTQKYSDGQEETADLATVTSDTIQADTVTRSLAVP 285

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDK 239
                    +     I++  +      +   +  E T      ++   R   +    F  
Sbjct: 286 KEQPAATAPKSATTAIATPATATATTAVAGSLTREMTPYLTNPTLPKGRFFALPGIAFQP 345

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            S      +   + ++  +L    +  I + G+ + +        N  LS  R     Q 
Sbjct: 346 GSLSMTATSQASINELSTLLKTYPQLQIQLVGYANDAQVG---ITNKGLSFKRVNLIKQQ 402

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN 328
           L+ SG++  R+  I G       + +D   
Sbjct: 403 LITSGINFQRVDAI-GRGTG--VMRNDTSR 429


>gi|330445248|ref|ZP_08308900.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489439|dbj|GAA03397.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 332

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +         L ++   +  + E    I G  D       A  N ++S +RA +    
Sbjct: 234 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAAINEKVSAERAANVANY 290

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339
           L  +G+   R+  +S  +++     +D     N   R + I+++
Sbjct: 291 LEANGIDASRL-TVSSVSYNDPI-KTDAATKTNYVQRSVQIILK 332


>gi|311697110|gb|ADP99982.1| conserved hypothetical protein, secreted [marine bacterium HP15]
          Length = 141

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I G T             RL+L RA SA   L+  GVS  +I  I+  +       +   
Sbjct: 67  INGRTSTLRPSKRDE---RLALARAVSARDYLVAHGVSPLKIM-INYVSAADFIADNGTP 122

Query: 328 NSA--NRRIDI 336
                N+R+DI
Sbjct: 123 EGRYLNQRVDI 133


>gi|218129608|ref|ZP_03458412.1| hypothetical protein BACEGG_01185 [Bacteroides eggerthii DSM 20697]
 gi|217988338|gb|EEC54661.1| hypothetical protein BACEGG_01185 [Bacteroides eggerthii DSM 20697]
          Length = 496

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 234 TPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+   S +  P  +V L ++  V       + + G  D+         N  LS  RA
Sbjct: 383 FFFFELGTSHLTDPSQLVNLDELARVAKKYGLKVKVTGAADS--ATGTIGINNALSASRA 440

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR--RIDIL 337
                 L K G+S DR++K +G           P  + NR  R+++ 
Sbjct: 441 DYIASELNKRGLSPDRMTK-TGEGG---ISDYAPTEA-NRHTRVELF 482


>gi|251733441|emb|CAR82470.1| pal [Mesorhizobium loti]
          Length = 87

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + L    +  I + GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GVS  R+  IS +   R   
Sbjct: 58  FLVAKGVSASRLKTIS-YGKERPVA 81


>gi|160899374|ref|YP_001564956.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
 gi|160364958|gb|ABX36571.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
          Length = 174

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 9/127 (7%)

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273
            V          + + +      F  + +         L  +   +    +   I G+ D
Sbjct: 57  MVPVVLEEDVARVVVENGVVKFYFASAKAELAVGANEALADVVAGVKG-GKRAVISGYHD 115

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333
           A+     A  N  L+  RA +    L   GV+E+++         +L+       +  RR
Sbjct: 116 AT---GSAELNAELAKKRALAVQAALSALGVAEEKVELKK---PEQLQADGSNAEA--RR 167

Query: 334 IDILVED 340
           +++++ D
Sbjct: 168 VEVILVD 174


>gi|170745045|ref|YP_001766503.1| hypothetical protein Mrad2831_6338 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170659207|gb|ACB28260.1| VirBTraTrw family protein [Methylobacterium radiotolerans JCM 2831]
          Length = 185

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 11/168 (6%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
              P +S    + +      Q L ++       +V        +            +   
Sbjct: 20  PKPPTVSGRDRVPVNSPVAAQTLQQEAFPPAPVVVQRQGGPQAVQRQQAPRAAARPLYPV 79

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
            +  F  +S+   P T   +  +  ++A     + +RG TD     +      R++  RA
Sbjct: 80  VSVQFPWNSAQFRP-TPAQVAHLRGLIAAGVAHVQVRGRTDNPNPSSGDE---RIARGRA 135

Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASD---PMNSANRRIDI 336
            +A   L+  GV    I         +R   +++      + NRR+DI
Sbjct: 136 EAAKDWLIGEGVPSGIIDLNFVSAGDYR---SNNRLSDGRALNRRVDI 180


>gi|251733491|emb|CAR82495.1| pal [Sinorhizobium medicae]
 gi|251733493|emb|CAR82496.1| pal [Sinorhizobium medicae]
 gi|251733495|emb|CAR82497.1| pal [Sinorhizobium medicae]
          Length = 87

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      ++I GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLVSRGVPGNRMRTIS-YGKEKPVA 81


>gi|225620699|ref|YP_002721957.1| outer membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225215519|gb|ACN84253.1| outer membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 203

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   ++I +         + +++ ++    I + G++        A  N++LS  R+  +
Sbjct: 84  FGFDNTIEIGTYKEAYNLVYQIINNNPGVRIMVEGNSSKE---GPAPYNYKLSQRRSDKS 140

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           +  ++K GV   ++ K + F     +  +      NRR + ++
Sbjct: 141 FNYIIKLGVENSKLLK-NAFGEALPEYPTLKE---NRRSEFII 179


>gi|91781675|ref|YP_556881.1| putative cytochrome c oxidase [Burkholderia xenovorans LB400]
 gi|91685629|gb|ABE28829.1| Putative cytochrome c oxidase [Burkholderia xenovorans LB400]
          Length = 538

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S++P      V        +H     ++ G TDA+     A  N +L+  RA + 
Sbjct: 442 FDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDAT---GSADLNAKLAKSRAEAV 498

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +G++ED I       I+G         SD   +  RR+ I
Sbjct: 499 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 534


>gi|289208674|ref|YP_003460740.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
 gi|288944305|gb|ADC72004.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
          Length = 253

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 24/185 (12%)

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            + +     ++ +     L   I S L     +++ +            +++  +    +
Sbjct: 50  QVERSSAAHVEVRNEATALRAAIYSVLEEEFREDLPRW---NAELDRDTLTLRFREPEVL 106

Query: 237 FDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNI-----ARDN 284
           F++SS+   P    +L              A     + I GHT +    +         N
Sbjct: 107 FERSSASIRPRFETILDDFMPRYAEQLRPFADVIREVRIEGHTSSEWAGSDDAMDAYFGN 166

Query: 285 WRLSLDRAYSAYQV------LMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336
             LS  R  +  +       L +      R++ + G +  R          + A+RR++ 
Sbjct: 167 MDLSQRRTRAVLEHAYRLEPLQEDDWFRSRVAAV-GLSSSRRVLDADGQEDHEASRRVEF 225

Query: 337 LVEDR 341
            V   
Sbjct: 226 SVLTD 230


>gi|242237467|ref|YP_002985648.1| hypothetical protein Dd703_0007 [Dickeya dadantii Ech703]
 gi|242129524|gb|ACS83826.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 248

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 36/179 (20%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++  + +   L     D++ +          +      Q    +F+ +S+   PE   +L
Sbjct: 55  KNTLQGLGQALQHEFKDDLKRWHATIDEDLTVRF----QEPNILFNNNSADLKPEFKAIL 110

Query: 253 Q-KIGEVLA--------HSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQV 298
              I   L          + E I I GHT                N  LS  R  S  + 
Sbjct: 111 DEFIPRYLNIITNPKYIDNIEEIRIEGHTSTVWRAGVSEKEAYIHNMELSQSRTRSTLEY 170

Query: 299 LMKSGV--SEDRI-------SKISGFAHHRLKIASD---------PMNSANRRIDILVE 339
           +M   V    + +        +  GF+  R   +              + ++R++  V 
Sbjct: 171 IMNMSVVSEPESMFSWFKGHVRAIGFSSARPVDSEGKVIISADKIEDRARSQRVEFRVR 229


>gi|307564567|ref|ZP_07627107.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
 gi|307346725|gb|EFN92022.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
          Length = 360

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 69/255 (27%), Gaps = 24/255 (9%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
              I   +NP     +    GI       +  + +  +   D  +T  +      +  ++
Sbjct: 115 FTNIFCEYNPDRAFELIGEAGIGYTIFYGDNRAVSPDNTLDDTELTSKTGLQFAFNFGEE 174

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           KQ+Q         + +             ++ G  L  +     S               
Sbjct: 175 KQFQFYVEPAVLWNLTHGPGDAVQFNKHAAQLGLFLGVNYKFMTSNGTHNFKVY------ 228

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                   K +  L  ++++    ++ + + +  +       +   I        F +  
Sbjct: 229 --DVAAMNKEINSLRDQLAAKPKEVIKEVVKEVPVEAQKELCVEDLIF-----VTFAQGK 281

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                +    L K+ E        + I G    +        N RLS  RA    + L  
Sbjct: 282 HYLTNDAKAALDKVPE-----GRHVQIVG---TASPEGPKELNDRLSQARADEVAKYLQN 333

Query: 302 SGVSEDRISKISGFA 316
            GV    I   +G  
Sbjct: 334 KGVV---IDSATGKG 345


>gi|323935681|gb|EGB31998.1| OmpA family protein [Escherichia coli E1520]
          Length = 137

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           A          G          G   +  
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKNIP 137


>gi|82777964|ref|YP_404313.1| putative outer membrane protein [Shigella dysenteriae Sd197]
 gi|81242112|gb|ABB62822.1| putative outer membrane protein [Shigella dysenteriae Sd197]
 gi|315253132|gb|EFU33100.1| OmpA family protein [Escherichia coli MS 85-1]
 gi|323941377|gb|EGB37561.1| OmpA family protein [Escherichia coli E482]
 gi|323946268|gb|EGB42301.1| OmpA family protein [Escherichia coli H120]
          Length = 137

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 52  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           A          G          G   +  
Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKNIP 137


>gi|254227706|ref|ZP_04921137.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262395752|ref|YP_003287605.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
 gi|151939748|gb|EDN58575.1| OmpA family protein [Vibrio sp. Ex25]
 gi|262339346|gb|ACY53140.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
          Length = 1591

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 31/315 (9%)

Query: 39  DFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98
           D MT  +A   + +  +A  +  K+                    F++            
Sbjct: 467 DLMTSSVA---LAFGFSAFKESRKEL-------TKAIRFANKGLDFNQAAALAFRKSGMN 516

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
              I   +     +L  G+ ++             +                     DL 
Sbjct: 517 ISFIKRELDVIKANLITGTFSENSTRLARSWFNGSVMEKMNRAFPILESGSSLVDLYDLV 576

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218
           +  +  +  + E       +S+  + ++   K  Q+ A+ +    + +   +  +     
Sbjct: 577 QKENELEKKSLEAKEDFDAVSQSYLQSISVIKAYQEWAQALDDAKNVINGSDGEEIAHIV 636

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF 277
               G+ I I  + N             +   V + + + +L + +  +SI GH      
Sbjct: 637 EDSQGLAIHINFKFNEWQHGNEHGKLRTDIKQVCKYLSQLMLDNPSYKVSIEGHAGRI-- 694

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSE---DRISKISGFAHHRLKIASDPM------- 327
              +  N  ++  RA +    ++   +     +R+   S + + +   A           
Sbjct: 695 -GSSDANALVAAKRAKTVTNAIIS--IDPSLEERVYTAS-YGNTQPLTADSTKSDMSQTG 750

Query: 328 ----NSANRRIDILV 338
                + +RR+++ +
Sbjct: 751 DSAPAALDRRVEVRL 765


>gi|299142777|ref|ZP_07035906.1| major outer membrane protein OmpA [Prevotella oris C735]
 gi|298575806|gb|EFI47683.1| major outer membrane protein OmpA [Prevotella oris C735]
          Length = 389

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 7/195 (3%)

Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDS--EKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +   N +    +  +     N+       +K   L     L   + K      P ++  K
Sbjct: 180 EAGWNRMEDDFDGLEGAALLNTHNGRGWEDKDNHLYAEVGLTFKLGKATWNKTPDVAAIK 239

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
            L+  +   L       ++  +  +   + +          +    I    +  F+    
Sbjct: 240 ALSQSQIDALNSQLNDANAE-NDKLRKQLAEKPKTTVLTKSVK-EFITTPISVFFNIGKI 297

Query: 243 IPLP-ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                + +V ++ + +    +   I + G+ D+S        N RLS  RA +  + L+K
Sbjct: 298 NVALLKDLVNVRALAKYAIANKSNILVTGYADSS--TGTPAINQRLSEQRANTVLEELVK 355

Query: 302 SGVSEDRISKISGFA 316
            GV   +I   +   
Sbjct: 356 MGVDRSKIRTAASGG 370


>gi|10955226|ref|NP_044255.1| hypothetical protein R751p46 [Enterobacter aerogenes]
 gi|1572563|gb|AAC64458.1| Upf30.5 [Enterobacter aerogenes]
          Length = 142

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
               S+  P++    Q   E L     A +  +I I G T              L+L RA
Sbjct: 33  KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 89

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA   L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 90  LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 136


>gi|254882132|ref|ZP_05254842.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|255013736|ref|ZP_05285862.1| putative outer membrane protein [Bacteroides sp. 2_1_7]
 gi|254834925|gb|EET15234.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 480

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 434 GFITAELEQRGIPAKRIIRVSKGGIADYMPVEAN 467


>gi|251733497|emb|CAR82498.1| pal [Sinorhizobium meliloti]
 gi|251733499|emb|CAR82499.1| pal [Sinorhizobium meliloti]
 gi|251733501|emb|CAR82500.1| pal [Sinorhizobium meliloti]
          Length = 87

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I+I GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLVSRGVPGNRMRTIS-YGKEKPVA 81


>gi|251733463|emb|CAR82481.1| pal [Agrobacterium rhizogenes]
          Length = 87

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325
            L   GV   R+  IS +   R     D
Sbjct: 58  YLASRGVPAQRMKTIS-YGKERPVATCD 84


>gi|325498706|gb|EGC96565.1| hypothetical protein ECD227_2803 [Escherichia fergusonii ECD227]
          Length = 246

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
          +KK+   +        W I YAD MT +M  FLV+ + + +    +    + 
Sbjct: 8  VKKRRGDEAEK---PFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQ 55


>gi|241764446|ref|ZP_04762469.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
 gi|241366139|gb|EER60722.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
          Length = 181

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + + +      F  + +         L  + + +A   +   + G  DA+     A  N 
Sbjct: 76  VRVENGVVKFYFATAKAELAAGANEALADVVKGVAE-GKKAVVSGFHDAT---GDAALNA 131

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338
            L+  RA++    L   GV+ED++         + +  +    N+  RR+++ +
Sbjct: 132 ELAKQRAFAVRDALQALGVAEDKVEL------KKPEETTATGSNAEARRVEVTL 179


>gi|325269069|ref|ZP_08135690.1| hypothetical protein HMPREF9141_0899 [Prevotella multiformis DSM
           16608]
 gi|324988690|gb|EGC20652.1| hypothetical protein HMPREF9141_0899 [Prevotella multiformis DSM
           16608]
          Length = 381

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + V          +S         F +       
Sbjct: 251 RDQAEIDALNAQINELRNRKPEVITKEVVKEVPAVKEFTVS---DLVFVTFAQGKYALTN 307

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +    L  I E        + + G    +        N RLS  RA      L   GV+ 
Sbjct: 308 DAKSALNNIKE-----GSHVQVVG---TASPEGSKEINDRLSQARADVVADYLKARGVN- 358

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 359 --VDEATGKG 366


>gi|242310642|ref|ZP_04809797.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523040|gb|EEQ62906.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 242

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 56/194 (28%), Gaps = 24/194 (12%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
           +   +  +    L   + E +   K+   +    K + + L G +       +       
Sbjct: 31  VYMVVISKAEKRLATQNAELLELNKQMSDIAKTYKNLQAELYGDLVAEFSGDLEKWNAEI 90

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---------AHSTEVISIRGHTD 273
               ++  +    +FD+           +L                    E I I GHT 
Sbjct: 91  DEDNTVRFREPEILFDQGKKEVKLRFKQILDDFFPRYVNILTQPKYKGDIEEIRIEGHTS 150

Query: 274 ASPFRN-----IARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKI 322
                          N  LS  RA    +     + + ED+     + + +G +  +   
Sbjct: 151 TEWQNAKSLEDRYLGNAELSQARALEVLKYCFNNTQIKEDKQWLIGVLRANGLSFAKPLE 210

Query: 323 ASDPMNSANRRIDI 336
           + +     +RR++ 
Sbjct: 211 SVE----LSRRVEF 220


>gi|31795134|ref|NP_857992.1| putative outer membrane protein [uncultured bacterium]
 gi|49176934|ref|YP_025437.1| hypothetical protein pJP4_73 [Ralstonia eutropha JMP134]
 gi|72384319|ref|YP_293672.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
 gi|77993246|ref|YP_358836.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
           pB8]
 gi|84310702|ref|YP_447032.1| hypothetical protein pTP6_37 [uncultured bacterium]
 gi|115345512|ref|YP_771697.1| hypothetical protein Bamb_6620 [Burkholderia ambifaria AMMD]
 gi|121582564|ref|YP_974093.1| hypothetical protein Ajs_4259 [Acidovorax sp. JS42]
 gi|319765131|ref|YP_004129067.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
 gi|13661673|gb|AAK38017.1| Upf30.5 [Comamonas testosteroni]
 gi|31746378|emb|CAD97503.1| putative outer membrane protein [uncultured bacterium]
 gi|39777514|gb|AAR31089.1| Upf30.5 [Ralstonia eutropha JMP134]
 gi|72123672|gb|AAZ65815.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
 gi|77733999|emb|CAI10763.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
           pB8]
 gi|84094982|emb|CAJ15604.1| Upf30.5 protein [uncultured bacterium]
 gi|89211885|gb|ABD63300.1| Upf30.5 [Proteus mirabilis]
 gi|89211891|gb|ABD63305.1| Upf30.5 [Bordetella bronchiseptica]
 gi|115286689|gb|ABI92163.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
 gi|120608620|gb|ABM44358.1| conserved hypothetical protein [Acidovorax sp. JS42]
 gi|317119818|gb|ADV02305.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
          Length = 143

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
               S+  P++    Q   E L     A +  +I I G T              L+L RA
Sbjct: 34  KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 90

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA   L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 91  LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 137


>gi|296160425|ref|ZP_06843242.1| cytochrome c oxidase, subunit II [Burkholderia sp. Ch1-1]
 gi|295889406|gb|EFG69207.1| cytochrome c oxidase, subunit II [Burkholderia sp. Ch1-1]
          Length = 538

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S++P      V        AH     ++ G TDA      A  N +L+  RA + 
Sbjct: 442 FDTGKSTLPADAKAAVEAAAAYAKAHPDAKFTLSGFTDA---SGSADLNAKLAKSRAEAV 498

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +G++ED I       I+G         SD   +  RR+ I
Sbjct: 499 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 534


>gi|251733469|emb|CAR82484.1| pal [Rhizobium tropici]
          Length = 87

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSSSIRADASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325
            L   GV   R+  IS +   R     D
Sbjct: 58  YLASRGVPAQRMKTIS-YGKERPVATCD 84


>gi|83311569|ref|YP_421833.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
 gi|82946410|dbj|BAE51274.1| Outer membrane protein and related peptidoglycan-associated lipo
           protein [Magnetospirillum magneticum AMB-1]
          Length = 239

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 19/108 (17%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ + +     T+ VL  +   L      VI ++G TDA      A  N  LS  RA + 
Sbjct: 66  FNHAKADITGSTMQVLWGLAPALKAAEPGVIRVQGFTDA---SGKAAYNRILSEKRAQAV 122

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS------DPMNSANRRIDIL 337
              L K GV+     ++SG       +        D      RR++I 
Sbjct: 123 ADQLRKLGVTAR--IEVSGQG----IVKGGKKGHKDQGA---RRVEIT 161


>gi|294787986|ref|ZP_06753230.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453]
 gi|294484279|gb|EFG31962.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453]
          Length = 165

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 13/76 (17%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           I G+TD++     A++N  LS  RA +     +K GVS   I         R   ++   
Sbjct: 100 ISGYTDST---GNAKNNELLSKKRAEAVKAFFIKHGVSAKNIEL------RRP-ESTIGA 149

Query: 328 NSAN---RRIDILVED 340
              N   RR+++ + D
Sbjct: 150 QGKNQEGRRVEVQITD 165


>gi|153833424|ref|ZP_01986091.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148870312|gb|EDL69242.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 235

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 70/210 (33%), Gaps = 23/210 (10%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            + G+     +DL   +     +    L ++ ++   + K + +  +K    +   + + 
Sbjct: 12  GDSGEHWMSVSDLMAGLMMVFLFISVALMRDAMVERDKIKEVAETYQKTQQAIYIALLEE 71

Query: 211 IVKGVLF-ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-------EVLAHS 262
             K +           +S+       +F    +    +  ++L           E     
Sbjct: 72  FAKDLDTWGAEIDRDTLSVNFTAPEVLFGNGKANLTQQFQIILNDFFPRYLEVLEQYKPI 131

Query: 263 TEVISIRGHTDASPFRNI-----ARDNWRLSLDRAYSAYQVLMK--------SGVSEDRI 309
            + I I GHT +    +        +N RLS  R  +    +MK         G  ++ +
Sbjct: 132 IQEIKIEGHTSSRWNHDSSDYEAYFNNMRLSQSRTRAVLGYVMKLDDVRAQHYGWVKNNV 191

Query: 310 SKISGFAHHRLKI-ASDPMNSANRRIDILV 338
           + + G++  +  +  +      +RR+   V
Sbjct: 192 AAV-GYSSSKAVVKDNVEDEKRSRRVSFRV 220


>gi|93005782|ref|YP_580219.1| hypothetical protein Pcryo_0954 [Psychrobacter cryohalolentis K5]
 gi|92393460|gb|ABE74735.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5]
          Length = 243

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
          K            W I +AD MT LM  FLV+  ++      K
Sbjct: 8  KKTRSKDEGEKPFW-ISFADLMTALMTLFLVVMAVSLMVVTKK 49


>gi|326334702|ref|ZP_08200909.1| immunoreactive antigen PG32 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693152|gb|EGD35084.1| immunoreactive antigen PG32 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 391

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 55/164 (33%), Gaps = 15/164 (9%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +         + +  +++NK+       L  ++    + ++R+  L + +    +     
Sbjct: 217 NGAHHFTRPSNREELEALNKQLAGLRSDLRGKEDQLSESQRRIAQLERDLEEARNKKPQV 276

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI- 268
                   + T   ++           +    +   P  +  +++I   L        + 
Sbjct: 277 IEKTITTSKKTLESVVT----------YRVGRTNIEPSQLPNVERIATYLKKYPNSKVVI 326

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           +G+            N +L+ DRA S  ++L+    ++ DRI  
Sbjct: 327 KGYASPE---GNLEKNQKLAADRAQSVKKILVSRYKIAADRIQA 367


>gi|281423980|ref|ZP_06254893.1| putative immunoreactive antigen PG33 [Prevotella oris F0302]
 gi|281401905|gb|EFB32736.1| putative immunoreactive antigen PG33 [Prevotella oris F0302]
          Length = 389

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 5/167 (2%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            +K   L     L   + K      P ++  K L+  +   L       ++  +  +   
Sbjct: 208 EDKDNHLYAEVGLTFKLGKATWNKTPDVAAIKALSQSQIDALNSQLNDANAE-NDKLRKQ 266

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGEVLAHSTEVISIR 269
           + +          +    I    +  F+         + +V ++ + +    +   I + 
Sbjct: 267 LAEKPKTTVLTKSVK-EFITTPISVFFNIGKINVALLKDLVNVRALAKYAIANKSNILVT 325

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           G+ D+S        N RLS  RA +  + L+K GV   +I   +   
Sbjct: 326 GYADSS--TGTPAINQRLSEQRANTVLEELVKMGVDRSKIRTAASGG 370


>gi|90410140|ref|ZP_01218157.1| hypothetical protein P3TCK_05216 [Photobacterium profundum 3TCK]
 gi|90329493|gb|EAS45750.1| hypothetical protein P3TCK_05216 [Photobacterium profundum 3TCK]
          Length = 237

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++      + L    +D    G   +       +S        +F    +   P+  V+L
Sbjct: 61  ENQQAIYLALLDEFESDLNKWGAEIDRES----LSFNFTAPEVLFANGRASLTPQFQVIL 116

Query: 253 QKIGEVL-------AHSTEVISIRGHTDASPFRNI-----ARDNWRLSLDRAYSAYQVLM 300
                           S + + I GHT +             +N RLS  R  +    +M
Sbjct: 117 DDFFPRYLQALNTYKPSIQEVRIEGHTSSRWNNGSTDSEAYFNNMRLSQSRTRTVLSYVM 176

Query: 301 KSGVSEDRI---------SKISGFAHHRLKIASD--PMNSANRRIDILV 338
              +   +I             G++  +  + +D       +RR+   V
Sbjct: 177 A--LEPVKINHYDWVKGHVAAVGYSSSKTIVNTDGIEDEKKSRRVSFRV 223


>gi|325300582|ref|YP_004260499.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324320135|gb|ADY38026.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 488

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETI-VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F   +      +  V L  I  ++      I I G  D+         N  LS  RA
Sbjct: 381 YFFFVLDTDRLTDNSQLVNLDGIARIVKKHGLRIQIIGAADS--ATGNDSINNSLSQRRA 438

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + GV  D+I  +S  G   +    A+
Sbjct: 439 AYMAGELRRRGVDADKIETVSVGGINDYNPVEAN 472


>gi|218659387|ref|ZP_03515317.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
          Length = 198

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F   SS   P+   +LQK+  V+       I I GHTDA      AR N  LS  RA   
Sbjct: 109 FAFDSSAIAPKEKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSTLRAREV 165

Query: 296 YQVLMKS-GVSEDRIS 310
            +   +   +  +R+ 
Sbjct: 166 ARFFTEDCQIPRERLE 181


>gi|330996823|ref|ZP_08320692.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329572266|gb|EGG53925.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 378

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 14/184 (7%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           + N+ +        +    A      +    +K +  ++        +      T     
Sbjct: 182 ANNRSDRINSKTTDRNDWAATASLGLIFKFGQKKAEKMAEEPVLVAEEWATRTDTVWYDD 241

Query: 226 ISIIDQRNTPMFDKSSS----IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280
           I+  D      ++ +      +  P+    +QKI + +         +  + D       
Sbjct: 242 ITYRDVPEKVTYEDNIYYKIRLSEPDPASKIQKIADFVKAHKNCNVQVTAYAD--KATGT 299

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVE 339
              N + S +RA      L+K+GVS   I+         +    +D     N R+ I+  
Sbjct: 300 PELNMQYSKERAEKVVAALVKAGVSRSVITS-EYKGDTVQPFAEND----KN-RVAIVKV 353

Query: 340 DRQG 343
             +G
Sbjct: 354 TGEG 357


>gi|317051627|ref|YP_004112743.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
 gi|316946711|gb|ADU66187.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
          Length = 193

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD +           ++++   L      +++ GH+D       A    R++  RA S  
Sbjct: 100 FDLNGFTLTEAQKERIKELASSLQ---GSVAVTGHSDHF---GPAWAKERVANRRAESVA 153

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             L   GVS   ++  +G + H     +    + NRR +I + +
Sbjct: 154 AYLTTLGVS---VASATGQSDHNQISTNP---AQNRRAEITLTE 191


>gi|300113444|ref|YP_003760019.1| hypothetical protein Nwat_0743 [Nitrosococcus watsonii C-113]
 gi|299539381|gb|ADJ27698.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
          Length = 237

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 36/126 (28%), Gaps = 24/126 (19%)

Query: 235 PMFDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDA-----SPFRNIAR 282
            +F   S+        +L           +    S + I I GHT +             
Sbjct: 98  VLFATGSTEIRQRFKEILSDFFPRYLVILKHYKDSIDEIRIEGHTSSIWNNRVSETKAYF 157

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANR 332
            N  LS  R  S    + +  +           R     GF+  RL      +   + +R
Sbjct: 158 LNMLLSQGRTRSVLHYVYE--LPAVERDRDWVKRHFAAVGFSSSRLVLDAQGNEDRARSR 215

Query: 333 RIDILV 338
           R+   V
Sbjct: 216 RVSFRV 221


>gi|313204864|ref|YP_004043521.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
 gi|312444180|gb|ADQ80536.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
          Length = 439

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 37/118 (31%), Gaps = 23/118 (19%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
            D   T  FD        + +  + KI   +       + +RG+ D   +      N  L
Sbjct: 332 FDDTPTVYFDFDRIDLDNDALETISKIAFKMKADPSLYVEVRGYCD---YLGKNPYNETL 388

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAH-------HRLKIASDPMNSANRRIDIL 337
           S  RA      L+K   +  D I  ++G          +R           NRR D  
Sbjct: 389 SKKRAERVKAELVKMWKIPSDHII-VNGKGKIIEPRVRYRP----------NRRCDFF 435


>gi|251733471|emb|CAR82485.1| pal [Sinorhizobium arboris]
 gi|251733473|emb|CAR82486.1| pal [Sinorhizobium arboris LMG 14919]
 gi|251733475|emb|CAR82487.1| pal [Sinorhizobium arboris]
          Length = 87

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I+I GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQATLDRQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GV  +R+  IS +   +   
Sbjct: 58  YLVSRGVPGNRMRTIS-YGKEKPVA 81


>gi|160889612|ref|ZP_02070615.1| hypothetical protein BACUNI_02038 [Bacteroides uniformis ATCC 8492]
 gi|156860604|gb|EDO54035.1| hypothetical protein BACUNI_02038 [Bacteroides uniformis ATCC 8492]
          Length = 197

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 6/129 (4%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
           P    ++        R +    +  + L+             +     + +         
Sbjct: 74  PVSKIDEDAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEV---AGPRAI 130

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294
            F   S+       V ++   ++L  + +    + G+ D       A  N +LS  RA  
Sbjct: 131 FFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSASWNQKLSEKRAQV 188

Query: 295 AYQVLMKSG 303
            Y  L+  G
Sbjct: 189 VYDALIAQG 197


>gi|261212910|ref|ZP_05927194.1| hypothetical protein VCJ_003186 [Vibrio sp. RC341]
 gi|262402954|ref|ZP_06079514.1| hypothetical protein VOA_000935 [Vibrio sp. RC586]
 gi|260837975|gb|EEX64652.1| hypothetical protein VCJ_003186 [Vibrio sp. RC341]
 gi|262350453|gb|EEY99586.1| hypothetical protein VOA_000935 [Vibrio sp. RC586]
          Length = 217

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 24/126 (19%)

Query: 235 PMFDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNI-----AR 282
            +F    +    +  ++L           E    + + I I GHT +    +        
Sbjct: 79  VLFANGKADLTQQFQIILNDFFPRYLEVLEQYKPTIQEIKIEGHTSSRWNHDSSDYEAYF 138

Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRI---------SKISGFAHHRLKIASD-PMNSANR 332
           +N  LS  R  +    +M   + + RI             G++  +  I +       +R
Sbjct: 139 NNMGLSQSRTRAVLSYVMA--IDKVRINHYGWVKNNVAAVGYSSSKAVIKNGLEDEKRSR 196

Query: 333 RIDILV 338
           R+   V
Sbjct: 197 RVSFRV 202


>gi|257092162|ref|YP_003165803.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044686|gb|ACV33874.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 176

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 20/123 (16%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287
            + R    F    ++   E+  +L++  + L    + V+++ GHTD       A  N  +
Sbjct: 64  DETRRVVYFAFGETMIDSESADILRQNAQKLKEDPQLVVTLVGHTDNL---GSAAYNLAV 120

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSAN--RRIDILV 338
           +  R  +    L   GV   +I ++          +        D        RR++++ 
Sbjct: 121 ADKRIEAVSDRLRSLGVPRSQIRRL-------PVGSEQSSKQACDSEACRRTMRRVELVY 173

Query: 339 EDR 341
           E R
Sbjct: 174 ERR 176


>gi|116006769|ref|YP_787953.1| hypothetical protein pBP136_p33 [Bordetella pertussis]
 gi|115500076|dbj|BAF33472.1| Upf30.5 [Bordetella pertussis]
          Length = 143

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
               S+  P++    Q   E L     A +  +I I G T              L+L RA
Sbjct: 34  KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 90

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA   L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 91  LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 137


>gi|255262704|ref|ZP_05342046.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
 gi|255105039|gb|EET47713.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
          Length = 43

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 3/41 (7%)

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
           ++  GV  +RIS   G+        ++       NRR  I 
Sbjct: 1   MVARGVDAERISA-QGYGESEPIATNETEEGRAANRRTTIT 40


>gi|109900289|ref|YP_663544.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
 gi|109702570|gb|ABG42490.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
          Length = 585

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 47/156 (30%), Gaps = 13/156 (8%)

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           + N            +    +++   + D    +            +  V    T   + 
Sbjct: 405 ANNSISGELDQQQYFDLRNRVQQLPGMLDSESVLGQISVTDPLTLQMDDVESIQTLIDLK 464

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASP 276
           I+  +  +   F  +SS   PE    +  + E+                  + G +DA  
Sbjct: 465 INQFNGASIE-FAINSSQLTPEAKDGISTVAEIGKTLLNLAKQTEQEMSFIVIGASDAQ- 522

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                  N  LS+ RA +    L   G+  D+++ I
Sbjct: 523 --GSRSYNEVLSIKRAQTVKNALQMRGIPADKLNAI 556


>gi|86160426|ref|YP_467211.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776937|gb|ABC83774.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 359

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            +    DA+          RL+   A +A   L + GV+  R++ + G+   R  + +  
Sbjct: 286 RVEAFVDATADAVAD---QRLTQAMADAATGRLRELGVAAARLTGV-GYGGERPLLPNFT 341

Query: 327 MNSA--NRRIDIL 337
           +     NRR++I+
Sbjct: 342 VRGRTANRRLEIV 354


>gi|15805563|ref|NP_294259.1| hypothetical protein DR_0536 [Deinococcus radiodurans R1]
 gi|6458233|gb|AAF10120.1|AE001912_5 hypothetical protein DR_0536 [Deinococcus radiodurans R1]
          Length = 201

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLS 288
           R+  MF   S++  PE    L    +VL    +      I GHT  S      R  W LS
Sbjct: 87  RSENMFVGESAVLTPEGETALVDFAQVLRSQKKNWKRIRIEGHTQTSRPNTPER--WDLS 144

Query: 289 LDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
             RA +      ++ G+S +R+  ++                 N R++I+VE
Sbjct: 145 ATRASAVAAAFYLRGGISPNRL-AVAARGGQTPFN-GHKFAPQNERVEIVVE 194


>gi|294627796|ref|ZP_06706376.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292597892|gb|EFF42049.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 186

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +S+   P T   +  +  ++A     + +RG TD     +       ++  RA +A 
Sbjct: 85  FPWNSAQFRP-TPAQVAHLRGLIAAGVAHVQVRGRTDNPNPSSGDE---HIARGRAEAAK 140

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASD---PMNSANRRIDI 336
             L+  GV    I         +R   +++      + NRR+DI
Sbjct: 141 DWLIGEGVPSGIIDLNFVSAGDYR---SNNRLSDGRALNRRVDI 181


>gi|327313681|ref|YP_004329118.1| OmpA family protein [Prevotella denticola F0289]
 gi|326945797|gb|AEA21682.1| OmpA family protein [Prevotella denticola F0289]
          Length = 369

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + V    T     +S         F +       
Sbjct: 239 RDQAEIDALNAQINELRNRKPEVITKEVVKEVPTVKEFTVS---DLVFVTFAQGKYALTN 295

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +    L  I E        + + G    +        N RLS  RA      L   GV+ 
Sbjct: 296 DAKSALNNIKE-----GSHVQVVG---TASPEGSKEINDRLSQARADVVANYLKARGVN- 346

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 347 --VDEATGKG 354


>gi|53714190|ref|YP_100182.1| putative outer membrane protein [Bacteroides fragilis YCH46]
 gi|52217055|dbj|BAD49648.1| putative outer membrane protein [Bacteroides fragilis YCH46]
          Length = 480

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 434 SFITAELEQRGIPAKRIIRVSKGGIADYTPVEAN 467


>gi|166710684|ref|ZP_02241891.1| OmpA family outer membrane lipoprotein [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 163

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD  +S   P+ + V+  +G  LA  + + + +RGHTDA   +     N  LS  
Sbjct: 2   NDRIVFDFDTSDIRPDAVRVIDPLGAALAKVSAKDMQVRGHTDA---KGSDDHNQALSER 58

Query: 291 RAYSAYQVLMKS 302
           RA +    L   
Sbjct: 59  RANAVLAALRAR 70


>gi|157156048|ref|YP_001461438.1| hypothetical protein EcE24377A_0284 [Escherichia coli E24377A]
 gi|157078078|gb|ABV17786.1| hypothetical protein EcE24377A_0284 [Escherichia coli E24377A]
          Length = 246

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68
          +KK+ + +        W I YAD MT +M  FLV+ + + +    +    + 
Sbjct: 8  VKKRRSDEAEK---PFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQ 55


>gi|312881649|ref|ZP_07741427.1| hypothetical protein VIBC2010_10367 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370712|gb|EFP98186.1| hypothetical protein VIBC2010_10367 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 331

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285
            +    N+ ++    +   P     L ++   +         + G  D+ P       N 
Sbjct: 218 QVDLAENSGIYRYDVAELEPTMKSQLLQLVNRIERLETYDIRVTGGADSKPMYLS--HNT 275

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            L+  RA +    L++ G+ +D I          +   ++  + + R+++I V   +
Sbjct: 276 DLAQRRAIAVADFLIQHGIQKDYIQI------EVMVTENEEDDPSARKVEITVHGTE 326


>gi|86146740|ref|ZP_01065060.1| hypothetical protein MED222_15379 [Vibrio sp. MED222]
 gi|85835390|gb|EAQ53528.1| hypothetical protein MED222_15379 [Vibrio sp. MED222]
          Length = 236

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 22/189 (11%)

Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
             +  +  EK +       + +   +I   L      +  K  +       + I    + 
Sbjct: 38  ALMNRIDVEKRVIKAMDITISEAQVRIHQALEKEFTQDFDKWQVELAADKSLSIDFYAKP 97

Query: 233 NTPMFDKSSSIPLPE-------TIVVLQKIGEVLAHSTEVISIRGHTDASPFR----NIA 281
               F  S S   P               + E      + I I GHT +           
Sbjct: 98  YH--FVSSESELSPALLSTLKVFFPRYINVLEQYQDDIQAIQIEGHTSSYWEGLNSFEAY 155

Query: 282 RDNWRLSLDRAYSAYQ-------VLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANR 332
           + N  LS +RA + ++       +L + G    +     G+   +L+        +S +R
Sbjct: 156 KQNMMLSQNRASAVFEKVVNFDGILEQHGSWVMKKLAALGYGPAQLRFHATGKEDSSRSR 215

Query: 333 RIDILVEDR 341
           R+   V  +
Sbjct: 216 RVSFKVITK 224


>gi|229043921|ref|ZP_04191617.1| Excalibur domain protein [Bacillus cereus AH676]
 gi|229127581|ref|ZP_04256572.1| Excalibur domain protein [Bacillus cereus BDRD-Cer4]
 gi|228655927|gb|EEL11774.1| Excalibur domain protein [Bacillus cereus BDRD-Cer4]
 gi|228725452|gb|EEL76713.1| Excalibur domain protein [Bacillus cereus AH676]
          Length = 299

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 50/171 (29%), Gaps = 6/171 (3%)

Query: 40  FMTV---LMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           F T+   L  FFLV+ I++         K+ I           ++       E+     +
Sbjct: 68  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALSGISDPSSEKTTATST 127

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                +    +   K   D K      +K+    +         Q  E  +         
Sbjct: 128 KVASNNEEQKDSEKKKEADEKTQKQEDEKRLADEQARKQEDEKRQADEQARKQQEEQKRL 187

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
             +  +    E+    +E        ++++   + +K+ ++  ++      
Sbjct: 188 ADEQARKQQEEQKRLADEQARKQQEEQKRLADEQARKQQEEQKRQADEQAR 238


>gi|281423309|ref|ZP_06254222.1| putative immunoreactive antigen PG33 [Prevotella oris F0302]
 gi|281402645|gb|EFB33476.1| putative immunoreactive antigen PG33 [Prevotella oris F0302]
          Length = 390

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 8/139 (5%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             L    + ++ DL  KI +       D +   +           SI +    P+    +
Sbjct: 237 DALKTMSQSQIDDLNNKIKNA--NDEGDRLRNELAQAPKDDVQTKSIKEFIAMPISVFFN 294

Query: 242 SIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
                   +        LA         + + G+ D+         N RLS  RA     
Sbjct: 295 INRTELARLKDLVNVRALAKYAVENNSRMVVTGYADS--ATGTPAINQRLSEARAKRLVD 352

Query: 298 VLMKSGVSEDRISKISGFA 316
            L+K GV+   IS  +G  
Sbjct: 353 ELVKMGVNRSNISVAAGGG 371


>gi|313149002|ref|ZP_07811195.1| predicted protein [Bacteroides fragilis 3_1_12]
 gi|313137769|gb|EFR55129.1| predicted protein [Bacteroides fragilis 3_1_12]
          Length = 445

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 29/167 (17%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +++ I   + K+ +  L  ++    +          VL       +            F 
Sbjct: 297 TEDSIEKNRMKQEIASLNMQLQQAQTDAKERVESNPVLGFNELPPV-----------YFK 345

Query: 239 KSSSIPL-PETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAY 296
           + S+          L +I E L    ++  I  G+ D +        N ++SL RA    
Sbjct: 346 RGSAYLNVALYKNELSRIVETLKKYPDLKVILLGYADHT---GNPDINQKISLQRAEVLA 402

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----RR--IDI 336
             L K G+   RI+ + G       I +   +  N     RR  ++I
Sbjct: 403 AYLEKKGIDSKRIN-VKGEC-----IDTLTSDPNNYSVLARRVIVEI 443


>gi|255011191|ref|ZP_05283317.1| hypothetical protein Bfra3_18764 [Bacteroides fragilis 3_1_12]
          Length = 435

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 29/167 (17%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
           +++ I   + K+ +  L  ++    +          VL       +            F 
Sbjct: 287 TEDSIEKNRMKQEIASLNMQLQQAQTDAKERVESNPVLGFNELPPV-----------YFK 335

Query: 239 KSSSIPL-PETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAY 296
           + S+          L +I E L    ++  I  G+ D +        N ++SL RA    
Sbjct: 336 RGSAYLNVALYKNELSRIVETLKKYPDLKVILLGYADHT---GNPDINQKISLQRAEVLA 392

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----RR--IDI 336
             L K G+   RI+ + G       I +   +  N     RR  ++I
Sbjct: 393 AYLEKKGIDSKRIN-VKGEC-----IDTLTSDPNNYSVLARRVIVEI 433


>gi|126661870|ref|ZP_01732869.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
           BAL38]
 gi|126625249|gb|EAZ95938.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
           BAL38]
          Length = 260

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 12/125 (9%)

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
            I   +     +++V  V        +++          F   S   +PE+  VL+++ +
Sbjct: 123 NIEKEIVEEGQNSLVNQVSIAKVGDKLIL------KNLHFYNRSGNFVPESRPVLEELLK 176

Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
           ++  +    I I+GH       ++       +  RA + Y  L+  G++++R+     F 
Sbjct: 177 IMLDNPNLKIEIQGHICCQKGTDVEDT----AKVRALAVYNYLINKGINKNRL-SYKSFG 231

Query: 317 HHRLK 321
             R  
Sbjct: 232 SSRPI 236



 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           IS    + T  FD  S       +  L    +      +   + G+ D   +R     N 
Sbjct: 14  ISFGQNKFTVYFDTDSYQLQLSELNRLDDFLK--NKDIKFTKVIGYCD---YRASNSYND 68

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            L+ +RA     ++ K  ++  +   I     +      D   + NR+++I 
Sbjct: 69  TLAFNRANFVNGIIEK--LTNQKQIAIESKGEN---FEQDSNLALNRKVEIY 115


>gi|46398713|gb|AAS92042.1| IcmN protein [Legionella pneumophila]
          Length = 112

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 11/114 (9%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
             + +F   S      +  +L ++   L    ++ I++  ++         R    L+L 
Sbjct: 2   PASALFXDQSPRLNWASYSLLNEVAAFLKQFRKIAITVTSYSSKYVSVKRER---ALTLA 58

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVED 340
           R+    + L   GV   RI    G    +   +     D   S N R++I    
Sbjct: 59  RSRVVSEYLWSQGVD-SRIIFTQGLGSDKPITSYTLGGD--RSPNARVEITFRR 109


>gi|317127354|ref|YP_004093636.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
 gi|315472302|gb|ADU28905.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
          Length = 232

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 37/174 (21%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN------TPMFDKSSSIP 244
           +++++ + I   +   V  NI++ +  E + + + + I +           +F+   +  
Sbjct: 48  QIEEMKRTIDQIMGVRV--NIIEDLNEEFSDSSLAVEIDENTGALIFNTDILFEFDEAEL 105

Query: 245 LPETIVVLQKIGEVL---------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            PE    L +                    I I GH D +        N  LS +RA+S 
Sbjct: 106 KPEGFEFLDEFVPTYLEVLLEGGYDEYISEIIIEGHADRT---GGYLYNLELSQERAFSV 162

Query: 296 YQVLMKSGVSEDRI-------SKISGFAHHRLKIASDPMNSAN------RRIDI 336
            + ++    S+  +         ++G ++             N      RR++ 
Sbjct: 163 AEHILSDRFSDPTVQEPLKEKLTVNGRSYT----DGRTDEEGNYSHEDSRRVEF 212


>gi|327402535|ref|YP_004343373.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327318043|gb|AEA42535.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 396

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 39/115 (33%), Gaps = 14/115 (12%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT----DASPFRNIARDNW 285
           ++    F    +   P+    L  + +V+  +  + I++ G      D    +     + 
Sbjct: 280 EKQEVYFGFGKTFLTPQAKAALDIVAKVMTENPTMSITVIGSNNEEEDKLAEKKDFYADM 339

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN---SANRRI 334
                R  +  + L+  G+S  R+       +         SD  +   + NRR+
Sbjct: 340 D--TKRNQAVKEYLLSKGISATRLKS-ESKGNEEPSPEIKESDDEDLKLAKNRRV 391


>gi|55418024|ref|YP_133924.1| putative outer membrane protein precursor [Plasmid pB3]
 gi|54969578|emb|CAG26014.1| putative outer membrane protein precursor [Plasmid pB3]
 gi|116874771|emb|CAJ98564.1| putative outer membrane protein precursor [uncultured bacterium]
          Length = 143

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
               S+  P++    Q   E L     A +  +I I G T              L+L RA
Sbjct: 34  KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 90

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            SA   L+  GVS  +I  ++  +       +        N+R+DI V
Sbjct: 91  LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 137


>gi|325860548|ref|ZP_08173652.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|325481933|gb|EGC84962.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
          Length = 375

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + V          +S         F +       
Sbjct: 245 RDQAEIDALNAQINELRNRKPEVITKEVVKEVPAVKEFTVS---DLVFVTFAQGKYALTN 301

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +    L  I E        + + G    +        N RLS  RA      L   GV+ 
Sbjct: 302 DAKSALNNIKE-----GSHVQVIG---TASPEGSKEINDRLSQARADVVANYLKARGVN- 352

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 353 --VDEATGKG 360


>gi|299142490|ref|ZP_07035621.1| major outer membrane protein OmpA [Prevotella oris C735]
 gi|298575925|gb|EFI47800.1| major outer membrane protein OmpA [Prevotella oris C735]
          Length = 390

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 10/152 (6%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +   + +        +      + K   D   ++   L+    D++    + E     I
Sbjct: 230 WNKTPDTDALKTMSQSQIDDLNNKIKNANDEGDRLRKELAQAPKDDVQTKSIKEFIAMPI 289

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            +     +        + +   + +V ++ + +    +   + + G+ D+         N
Sbjct: 290 SVFFNINK--------TELARLKDLVNVRALAKYAVENNSRMLVTGYADS--ATGTPAIN 339

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            RLS  RA      L+K GV+   IS  +G  
Sbjct: 340 QRLSEARAKRLVDELVKMGVNRSNISVAAGGG 371


>gi|320577124|gb|ADW54071.1| outer membrane protein A [endosymbiont of Columbicola columbae]
          Length = 250

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288
           ++  +F+   ++  PE    L ++   ++        + + G+TD          N +LS
Sbjct: 183 KSDVLFNFDKAMLKPEGQQALDQLYSKMSAMDPKDSSVIVLGYTDRI---GSDAYNQKLS 239

Query: 289 LDRAYSAYQVL 299
             R  S    L
Sbjct: 240 QARVQSVVSYL 250


>gi|94501278|ref|ZP_01307799.1| hypothetical protein RED65_02659 [Oceanobacter sp. RED65]
 gi|94426549|gb|EAT11536.1| hypothetical protein RED65_02659 [Oceanobacter sp. RED65]
          Length = 236

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 51/180 (28%), Gaps = 24/180 (13%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             K+   +  L   + + L   +       +          ++    +   +F K  S  
Sbjct: 46  QRKKIADVAILYDTLRTQLYEDLQKEFAPDLPQWGAEIDEDLTFRFNKTDLLFAKGESSL 105

Query: 245 LPETIVVLQKI---------GEVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLD 290
            PE   +L                      + I GHT +       +D     N  LS  
Sbjct: 106 NPEFQAILSDFFPRYLAIITQPQYRDDILEVRIEGHTSSGWLGAKDKDEAYINNMALSQA 165

Query: 291 RAYSAYQVLMKS-GVSEDR-----ISKISGFAHHRLKIASDPM---NSANRRIDILVEDR 341
           R  S    L+    V +++         +G +  +  I  +        +RR++  V   
Sbjct: 166 RTRSTLAYLLNLPRVQDEKTWLKTYLTANGLSSAK-VIRDETGIESGERSRRVEFKVRTD 224


>gi|124004173|ref|ZP_01689019.1| putative exported isomerase [Microscilla marina ATCC 23134]
 gi|123990243|gb|EAY29742.1| putative exported isomerase [Microscilla marina ATCC 23134]
          Length = 777

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 11/113 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           + N   FDK   +        L  +  +L  +      + GH D +           LS 
Sbjct: 567 KVNNVYFDKEQKVLDQNAQRTLLSVANLLKKNRHYKLELSGHIDPAEPVG-------LSS 619

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
            R  +    L++  +  DRI+    + + +     D     NRRI+      Q
Sbjct: 620 QRLQNTLDFLLRQRIGVDRITT-KDYKNSKPVSIKD--RRRNRRIEFAFYSSQ 669


>gi|206975258|ref|ZP_03236172.1| conserved domain protein [Bacillus cereus H3081.97]
 gi|217959697|ref|YP_002338249.1| hypothetical protein BCAH187_A2296 [Bacillus cereus AH187]
 gi|206746679|gb|EDZ58072.1| conserved domain protein [Bacillus cereus H3081.97]
 gi|217067730|gb|ACJ81980.1| conserved domain protein [Bacillus cereus AH187]
          Length = 331

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 58/177 (32%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L  FFLV+ I++          +         +  A   I +  +    ++  K+  +  
Sbjct: 73  LFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFGALSSISNPTSEKTTATSKKVASNTT 132

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
           E    +  +L+    ++K Q Q  E         +Q +  + +  +  ++ ++  +  D 
Sbjct: 133 EQKDSDKKELEKKEADEKTQKQEDEKRQAEEQARKQEDEKRQADEQARKQQEEQKRLADE 192

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           +    +EE   L      K    ++++  +   K+              +    +  
Sbjct: 193 QTRKQQEEQKRLADEQTRKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQ 249


>gi|332880998|ref|ZP_08448668.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681172|gb|EGJ54099.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 378

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 14/149 (9%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS----IPLPETIVVLQKIG 256
             ++        +      T     I+  D     +++ +      +  P+    +QKI 
Sbjct: 217 EKMAEEPVPVAEEWATRTDTVWYDDITYRDVPEKVIYEDNIYYKIRLSEPDPASKIQKIA 276

Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           + +         +  + D          N + S +RA      L+K+GVS   I+     
Sbjct: 277 DFVKAHKNCSVQVTAYAD--KATGTPELNMQYSKERAEKVVAALVKAGVSRSVITS-EYK 333

Query: 316 AHH-RLKIASDPMNSANRRIDILVEDRQG 343
               +    +D     N R+ I+    +G
Sbjct: 334 GDTVQPFAEND----KN-RVAIVKVTGEG 357


>gi|251733513|emb|CAR82506.1| pal [Sinorhizobium terangae]
 gi|251733515|emb|CAR82507.1| pal [Sinorhizobium terangae]
 gi|251733517|emb|CAR82508.1| pal [Sinorhizobium terangae]
          Length = 87

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  YLASRGVPANRMRTIS-YGKEKPVA 81


>gi|319901547|ref|YP_004161275.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319416578|gb|ADV43689.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 418

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 13/119 (10%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282
           +  SI   ++   F    +       + +  + + L    E  + + G+           
Sbjct: 307 VAKSIPGLKSFVAFGNGQASVASTQEMNVLAVADYLKQYPETEVVVTGYAST--GTGSRE 364

Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF--AHHRLKIASDPMNSANRRIDILV 338
            N RL+  RA +  + L  K G+S DR+  +        +    SD       R+ I+V
Sbjct: 365 LNLRLARQRAEAVAKTLTDKYGISSDRL-TVKSMQDGE-QPFQTSDWN-----RVTIMV 416


>gi|284051994|ref|ZP_06382204.1| hypothetical protein AplaP_11036 [Arthrospira platensis str.
           Paraca]
 gi|291568824|dbj|BAI91096.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 266

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 36/216 (16%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           +D   S ++E    +  L         +   LQ    ++ + L       +      E  
Sbjct: 48  SDATASRSEELQIQMSELQSRLQQQTTQVTGLQGEVARLQTELRNRGDRIMQLQGEVERL 107

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-----GEVLAHSTEVI-SIRGHTDA 274
           ++  +I + D  +   FD  S+    E    +         +        +  + GHTD 
Sbjct: 108 KSPPVIVLRDSSSRT-FDSGSAAISLELTEFIDNQLVAQIKDFAKDYEGYVVEVIGHTDG 166

Query: 275 SPFRNIAR----------------------DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                                          N  L L RA +  Q L ++   +      
Sbjct: 167 QITGGGYSNLDQVLEEVARNNQAVTSLVPGSNADLGLMRALAVVQRLQENEELQSLGLTF 226

Query: 313 SGFAHHRLKIASDPMNSAN-------RRIDILVEDR 341
             ++  +L  AS    + N       RRI+I    +
Sbjct: 227 KAYSAAQLYEASGNYAAINRTSDPSRRRIEIRFTPK 262


>gi|83815923|ref|YP_445040.1| hypothetical protein SRU_0906 [Salinibacter ruber DSM 13855]
 gi|83757317|gb|ABC45430.1| conserved protein [Salinibacter ruber DSM 13855]
          Length = 323

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 63/228 (27%), Gaps = 8/228 (3%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E          +  H   ++    I      +     +     +    Q     +     
Sbjct: 73  EFGDGATGSGLLTNHSYSSTGQYAIRFQASNEGGSDSDTISVRVVPPPQPASITSINATP 132

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +   +            +   +           ++       ++  +  +   +      
Sbjct: 133 NPVDEGETVRFSSNVQGDTPVSRSWSFGDGSSSMSQSPTHTYEEPGQYTARLEASNDVGE 192

Query: 211 IVKGVLFETTRTGILI-SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268
             + V     R    I + + + N+  FD++SS    E    LQ+  ++L+      + +
Sbjct: 193 DTRTVTVRVNRVLPEICTTVSEMNSAFFDRNSSTLTEEGEESLQENADILSDCPNLSVQV 252

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            G           R+   LS DRA +       +GV   RI   SG  
Sbjct: 253 EGFA-----APGERNVQSLSEDRAEAVSSFYQNNGVPGSRIMT-SGQG 294


>gi|327398805|ref|YP_004339674.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
 gi|327181434|gb|AEA33615.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
          Length = 234

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 10/73 (13%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327
           + G+TD          N  L+  RA +  Q L + G +   +     F  +     +   
Sbjct: 172 VEGYTDC---AGSREYNNVLARKRAENVAQFLNRHGFNAVVLPS---FGKYHTLKTAKES 225

Query: 328 NSANRRIDILVED 340
               RR++I VE 
Sbjct: 226 ----RRVEIYVEK 234


>gi|222095784|ref|YP_002529841.1| hypothetical protein BCQ_2124 [Bacillus cereus Q1]
 gi|221239842|gb|ACM12552.1| conserved hypothetical protein [Bacillus cereus Q1]
          Length = 331

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 57/177 (32%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L  FFLV+ I++          +         +  A   I +  +    ++  K+  +  
Sbjct: 73  LFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFGALSSISNPTSEKTTATSKKVASNTT 132

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
           E    +  +L+    ++K Q Q  E         +Q +  + +  +  ++ ++  +  D 
Sbjct: 133 EQKDSDKKELEKKEADEKAQKQEDEKRQAEEQARKQEDEKRQADEQARKQQEEQKRLADE 192

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           +    +EE          K    ++++  +   K+              +    +  
Sbjct: 193 QTRKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQ 249


>gi|325520678|gb|EGC99724.1| outer membrane protein A [Burkholderia sp. TJI49]
          Length = 74

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 10/59 (16%)

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDIL 337
           S  RA +   +L++ G+  DRI    GF         A    +         +RR++I+
Sbjct: 2   SQRRANAVKALLVEHGIPADRIDA-RGFGAQDPIAQCADTMPHDRLVACLQPDRRVEIV 59


>gi|329117903|ref|ZP_08246617.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465984|gb|EGF12255.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 172

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 8/92 (8%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
           +T  F   S++        LQ+   +L      +++ G+ D          N RL+  RA
Sbjct: 82  HTVYFRTDSAVLSAHEKQALQRAAPMLRQQG--VTLSGYADPRAGV---EYNNRLAARRA 136

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324
            S  + L   GV   R+++   F   RL  + 
Sbjct: 137 ESVARYLDGLGV---RVNRRCIFGETRLPDSD 165


>gi|288802715|ref|ZP_06408153.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|288334865|gb|EFC73302.1| conserved hypothetical protein [Prevotella melaninogenica D18]
          Length = 382

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 68/219 (31%), Gaps = 12/219 (5%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
                 +   + S++      ++ K+     N +  ++ +   E+   + ++  +   ++
Sbjct: 161 GSAKQFQFYVEPSINFAFLGQSKSKELVATGNALAPVALADHQEYGYKAASQAGQPAYNI 220

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             S     +    +           I+  + +  +  L  +I+  L     + I K V+ 
Sbjct: 221 NNSFVQLNAGFIYKFANSNGTHNFTIVTPRDQAEIDALNAQINE-LRNRKPEVITKEVVK 279

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
           E     +    +       F +  S    +    L  + E +      + + G    +  
Sbjct: 280 EVPSVKVKEFTVSDLVFVTFAQGKSALTNDAKAALNNVKEGV-----HVQVVG---TASP 331

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
                 N RLS  RA      L   GV    + + +G  
Sbjct: 332 EGSKELNDRLSQARADVVANYLKGRGVI---VDEATGKG 367


>gi|187922551|ref|YP_001894193.1| cytochrome C oxidase subunit II [Burkholderia phytofirmans PsJN]
 gi|187713745|gb|ACD14969.1| cytochrome c oxidase, subunit II [Burkholderia phytofirmans PsJN]
          Length = 544

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S++P      V        AH     ++ G TDA+        N +L+  RA + 
Sbjct: 448 FDTGKSTLPADAKAAVDAAAAYAKAHPDAKFALSGFTDAT---GSGDLNAKLAKSRAEAV 504

Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336
              L  +G++ED I       I+G         SD   +  RR+ I
Sbjct: 505 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 540


>gi|294506913|ref|YP_003570971.1| PKD repeat protein [Salinibacter ruber M8]
 gi|294343241|emb|CBH24019.1| PKD repeat protein [Salinibacter ruber M8]
          Length = 324

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 63/228 (27%), Gaps = 8/228 (3%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
           E          +  H   ++    I      +     +     +    Q     +     
Sbjct: 74  EFGDGATGSGLLTNHSYSSTGQYAIRFQASNEGGSDSDTISVRVVPPPQPASITSINATP 133

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
           +   +            +   +           ++       ++  +  +   +      
Sbjct: 134 NPVDEGETVRFSSNVQGDTPVSRSWSFGDGSSSMSQSPTHTYEEPGQYTARLEASNDVGE 193

Query: 211 IVKGVLFETTRTGILI-SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268
             + V     R    I + + + N+  FD++SS    E    LQ+  ++L+      + +
Sbjct: 194 DTRTVTVRVNRVLPEICTTVSEMNSAFFDRNSSTLTEEGEESLQENADILSDCPNLSVQV 253

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            G           R+   LS DRA +       +GV   RI   SG  
Sbjct: 254 EGFA-----APGERNVQSLSEDRAEAVSSFYQNNGVPGSRIMT-SGQG 295


>gi|241761156|ref|ZP_04759245.1| hypothetical protein ZmobDRAFT_0322 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374775|gb|EER64236.1| hypothetical protein ZmobDRAFT_0322 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 218

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 11/181 (6%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           ++     ++  +      D  +  N             K  +     +  D     +   
Sbjct: 31  EHDPKEVADSLRSAFNHEDHNRQKNNGAGGSALQSDVNKTASPADAMKANDTNTSNAKDD 90

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    DN    +            + D     +F    +I   +    L +  +  A ++
Sbjct: 91  NKSTTDN---CLTKTGAACPTQDFLADD----LFSPQDAILTDKGKAALAQFAKKAARAS 143

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I  H           D W L+  R  S  + L  SGV E+ +  +   A       
Sbjct: 144 AYFMIESH--GIGNGTARFDKWELAAARTASVARQLKSSGVDENHLKIM--MAPDNPLAD 199

Query: 324 S 324
           +
Sbjct: 200 N 200



 Score = 39.9 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 55/176 (31%), Gaps = 17/176 (9%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN-----LMTASKGIFDE 86
            W + Y D +  ++ FF++++      +   K +         +           G    
Sbjct: 8   RWTVSYIDLLMTILGFFVLLYA----REHDPKEVADSLRSAFNHEDHNRQKNNGAGGSAL 63

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN--------QKKQYQRLENNIFYLSNSQ 138
           Q+   +++     +  ++  T N+ D    +T+               L +++F   ++ 
Sbjct: 64  QSDVNKTASPADAMKANDTNTSNAKDDNKSTTDNCLTKTGAACPTQDFLADDLFSPQDAI 123

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++  K +L + ++K         +E                         ++L+ 
Sbjct: 124 LTDKGKAALAQFAKKAARASAYFMIESHGIGNGTARFDKWELAAARTASVARQLKS 179


>gi|296448454|ref|ZP_06890337.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
 gi|296254042|gb|EFH01186.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
          Length = 571

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 49/204 (24%), Gaps = 11/204 (5%)

Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195
             +           D      L   T L        +  +               + +  
Sbjct: 379 AGEIGVAAGAPAGFDRAAAAALRAVTRLRTGAAAISDRRIAVEGAAFTARAAEDIKARLA 438

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +      S  +                  I+             S++      V     
Sbjct: 439 KETPEGFESSALLGLASPEDEIAPAELHAAIARTVAPGFSFSADHSALAEEAEPVADALA 498

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
             +L      ++I G  D         +N  +   RA +    L+ +GV   R+   +  
Sbjct: 499 FVLLRAPRAKVAIIGRFD---GAGSEAENETIGRRRAEALRDYLVAAGVDATRLKAAASG 555

Query: 316 AHHRLKIASDPMNSANRRIDILVE 339
           A         P     RRI+++V+
Sbjct: 556 AS----GDDAPG----RRIELMVD 571


>gi|284042327|ref|YP_003392667.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
 gi|283946548|gb|ADB49292.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
          Length = 913

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +   F   S+  LP  +  L+++   L  +  + S+ GHTDA       R   R     
Sbjct: 809 PSDGQFATDSARLLPAGVRHLRRVAADLDGARSIRSV-GHTDARGDATANRALGRARA-- 865

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338
             +   VL ++GV       ++     R +         + NRR++++V
Sbjct: 866 -AAVCAVLRRAGVRAR--LPVASAGESRPRADDATPAGRALNRRVELVV 911


>gi|262394041|ref|YP_003285895.1| hypothetical protein VEA_003270 [Vibrio sp. Ex25]
 gi|262337635|gb|ACY51430.1| hypothetical protein VEA_003270 [Vibrio sp. Ex25]
          Length = 416

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-------IRGHTDASPFRNIARDN 284
            +  +FD   S P  + +  L      +    +          I G+TD  P  +    N
Sbjct: 286 ESDTLFDSYESTPSAQGLKKLDVFTNKIQGYLKSSKLEIASASITGYTDRMPVLSDVDTN 345

Query: 285 WRLSLDRAYSAYQVLMKSGVSED--RISKISGFAHHRLKIAS----DPMNSA-----NRR 333
             LSL RA S +  L     +E   ++ K++G      K       + M        +RR
Sbjct: 346 HALSLRRAKSVFGSLSSL-FNEHVIKLVKVTGKGALNPKSKCGKELESMELKECLSVDRR 404

Query: 334 IDI 336
           ++I
Sbjct: 405 VEI 407


>gi|254228194|ref|ZP_04921623.1| hypothetical protein VEx25_B0156 [Vibrio sp. Ex25]
 gi|151939267|gb|EDN58096.1| hypothetical protein VEx25_B0156 [Vibrio sp. Ex25]
          Length = 433

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-------IRGHTDASPFRNIARDN 284
            +  +FD   S P  + +  L      +    +          I G+TD  P  +    N
Sbjct: 303 ESDTLFDSYESTPSAQGLKKLDVFTNKIQGYLKSSKLEIASASITGYTDRMPVLSDVDTN 362

Query: 285 WRLSLDRAYSAYQVLMKSGVSED--RISKISGFAHHRLKIAS----DPMNSA-----NRR 333
             LSL RA S +  L     +E   ++ K++G      K       + M        +RR
Sbjct: 363 HALSLRRAKSVFGSLSSL-FNEHVIKLVKVTGKGALNPKSKCGKELESMELKECLSVDRR 421

Query: 334 IDI 336
           ++I
Sbjct: 422 VEI 424


>gi|253573133|ref|ZP_04850519.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837280|gb|EES65386.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 96

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +S+    +    +  + E L   +   +S+ G+ D          N  LS  RA +  ++
Sbjct: 2   NSAKIQDDQQAKISSLVEYLEKHSAAKVSVTGYADKE--TGNPNINMTLSEKRAKNVIEM 59

Query: 299 LMKSGVSEDRISKISGF-AHH-RL 320
           L   GV  DRI  + G+     + 
Sbjct: 60  LKAKGVVADRI--VIGYKGDTVQP 81


>gi|325954884|ref|YP_004238544.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
 gi|323437502|gb|ADX67966.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
          Length = 439

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID---QRNTPMFDKSS-S 242
            R++   DL           + D +++ +  +  +     S+ D     +   F+ +S  
Sbjct: 282 AREEATFDLDGLTIKGYKDGLEDQLIRFIKSDDYKNATEESLKDKWFNFDNVNFEFNSTD 341

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                +   L+ +  +L    E  I I  ++D    +     N  +S  RA      L K
Sbjct: 342 QLEAGSHEQLENLAAILKKFPESKIKIGAYSDK---KGDDNINKEVSQKRADFLKTELGK 398

Query: 302 SGVSEDRISKISGFAH---HRLKIASDPMNSANR 332
            GV  +++    G+        + ASD   + +R
Sbjct: 399 LGV-GEQVVSAEGYGEEFATVPETASDEERAVDR 431


>gi|269124147|ref|YP_003306724.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268315473|gb|ACZ01847.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2078

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 9/160 (5%)

Query: 161  TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
             +     N   N     L ++    + + K+L++   ++    +  + D I +       
Sbjct: 1899 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDRLRRE-NDRIGDEIKELRERIKA 1957

Query: 221  RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278
               I ++  D      +             +L  I   L  + +     I G+TD     
Sbjct: 1958 IEKIKMNEDDLYTLDGYRLGIHELTSSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2014

Query: 279  NIARDNWRLSLDRAYSAYQVLMKSGVSED---RISKISGF 315
            +    N  L L RA    + L + G+      R    SG+
Sbjct: 2015 SGEDLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGY 2054


>gi|309784651|ref|ZP_07679286.1| ompA family protein [Shigella dysenteriae 1617]
 gi|312973153|ref|ZP_07787326.1| ompA family protein [Escherichia coli 1827-70]
 gi|308927548|gb|EFP73020.1| ompA family protein [Shigella dysenteriae 1617]
 gi|310333095|gb|EFQ00309.1| ompA family protein [Escherichia coli 1827-70]
          Length = 104

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           A          G          G   +  
Sbjct: 76  ANVVADAWAMGGQIPRSNLTTQGLGKNIP 104


>gi|313146790|ref|ZP_07808983.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135557|gb|EFR52917.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 369

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 265 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 322

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 323 GFITAELEQRGIPAKRIIRVSKGGIADYTPVEAN 356


>gi|298483893|ref|ZP_07002064.1| outer membrane protein [Bacteroides sp. D22]
 gi|298269953|gb|EFI11543.1| outer membrane protein [Bacteroides sp. D22]
          Length = 480

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 434 GFITAELEQRGIPAKRIIRVSKGGIADYTPVEAN 467


>gi|255009049|ref|ZP_05281175.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 480

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 434 GFITAELEQRGIPAKRIIRVSKGGIADYTPVEAN 467


>gi|224026661|ref|ZP_03645027.1| hypothetical protein BACCOPRO_03418 [Bacteroides coprophilus DSM
           18228]
 gi|237717911|ref|ZP_04548392.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|253567288|ref|ZP_04844737.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|256840266|ref|ZP_05545774.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|293369584|ref|ZP_06616162.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|294644301|ref|ZP_06722069.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294807206|ref|ZP_06766020.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|224019897|gb|EEF77895.1| hypothetical protein BACCOPRO_03418 [Bacteroides coprophilus DSM
           18228]
 gi|229452851|gb|EEO58642.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|251943857|gb|EES84385.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|256737538|gb|EEU50864.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|292635288|gb|EFF53802.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292640372|gb|EFF58622.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294445504|gb|EFG14157.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 480

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     +    L ++  V    +  + + G  D+S     +  N  LS+ RA
Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
                 L + G+   RI ++S  G A +    A+
Sbjct: 434 GFITAELEQRGIPAKRIIRVSKGGIADYTPVEAN 467


>gi|251733461|emb|CAR82480.1| pal [Agrobacterium tumefaciens]
          Length = 87

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    LQ+  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  FLASQGVPANRMKTIS-YGKEKPVA 81


>gi|251733455|emb|CAR82477.1| pal [Rhizobium huautlense]
          Length = 87

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + L       I++ GH D          N  L   RA +  +
Sbjct: 1   TDSTSIRADAQQTLDRQAQWLQRYPNYAITVEGHADER---GTREYNLALGARRAAATKE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   R   
Sbjct: 58  YLASRGVPANRMKTIS-YGKERPVA 81


>gi|313683484|ref|YP_004061222.1| hypothetical protein Sulku_2362 [Sulfuricurvum kujiense DSM 16994]
 gi|313156344|gb|ADR35022.1| hypothetical protein Sulku_2362 [Sulfuricurvum kujiense DSM 16994]
          Length = 238

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 35/188 (18%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             ++K  +  ++  + ++  L      +++K          +     D     +F   SS
Sbjct: 42  QDSVKVPQIYKETTQGLNHALKKEFDKDLMKWGAVIDKDLTVRFQQPD----ILFATGSS 97

Query: 243 IPLPETIVVLQ---------KIGEVLAHSTEVISIRGHTDASPFRNIARD-----NWRLS 288
              P    +L           + +   ++ E I I GHT +       R      N  LS
Sbjct: 98  ALTPRFKEILDDFFIRYLKIMMSKPFINNIEEIRIEGHTSSMWEGESDRGKAYFKNMTLS 157

Query: 289 LDRAYSAYQVLMKS------GVSED---RISKISGFAHHRL-------KIASDPMNSA-N 331
            +R  +  + +M S      G  ++   R     GF+            +  +  +S  +
Sbjct: 158 QERTRATLEYIMTSDKINLTGEQKEWLMRHFSAIGFSSGHPLTNKGTYLVDGESEDSQLS 217

Query: 332 RRIDILVE 339
           +R++  V 
Sbjct: 218 QRVEFRVR 225


>gi|332753351|gb|EGJ83731.1| ompA family protein [Shigella flexneri 4343-70]
 gi|332755671|gb|EGJ86034.1| ompA family protein [Shigella flexneri 2747-71]
 gi|333015519|gb|EGK34858.1| ompA family protein [Shigella flexneri K-227]
          Length = 104

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291
           +  +F K+    LPE+   +Q +   LA +      + GHTD          N  LSL R
Sbjct: 19  DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           A          G          G   +  
Sbjct: 76  ANVVADAWAIGGQIPRSNLTTQGLGKNIP 104


>gi|213421509|ref|ZP_03354575.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 34

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADF 40
             +++K++          GSWKI YADF
Sbjct: 6  HPIVVVKRRRHKPHGGGAHGSWKIAYADF 34


>gi|148652830|ref|YP_001279923.1| outer membrane protein [Psychrobacter sp. PRwf-1]
 gi|148571914|gb|ABQ93973.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein-like protein [Psychrobacter sp. PRwf-1]
          Length = 266

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 76/264 (28%), Gaps = 20/264 (7%)

Query: 44  LMAFFLVMWII---NATDDDTKKAIEQ-----YFNPFGKNLMTASKGIFDEQNPPERSSQ 95
           L+   +++  +          ++ I         N         +   F   N  +  + 
Sbjct: 7   LLTVLIMLIAMTGCQTVSTPIEQGISTADGMRQLNKIESIQWDKTGEAFSILNNLQLDAN 66

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQK--KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
               + I +H+ +          +          + +   + N +Q    +NS    +  
Sbjct: 67  QSRIVFIHDHLDQTIPHSINIDVDSAFHTSLHPGQYSQSIVCNGEQVIGIQNSAVNTNTF 126

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
              +       +     +    P   K  I  ++     Q L + +S             
Sbjct: 127 NDQIVTPFFQPQQTYYYQVSLDPQSDKASINPVEEAVAFQ-LLQGLSEQTHQKNRVEAKD 185

Query: 214 GVLFETTRTGILISIIDQRNTP-----MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268
             + E     +      + N P     +FD  S+         L+ + + L+ +    ++
Sbjct: 186 CTVIEKETETVEPPAPVEVNKPITLDVLFDFDSAKIKSTYQQTLRDVAQFLSANANTKAV 245

Query: 269 -RGHTDASPFRNIARDNWRLSLDR 291
             GHTD++     A  N  LS  R
Sbjct: 246 LEGHTDST---GPASYNLILSQAR 266


>gi|260752881|ref|YP_003225774.1| hypothetical protein Za10_0642 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552244|gb|ACV75190.1| hypothetical protein Za10_0642 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 218

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 11/181 (6%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           ++     ++  +      D  K  N             K  +     +  D     +   
Sbjct: 31  EHDPKEVADSLRSAFNHEDHNKQKNNGAGGSTLQSDVNKTASPADAMKANDTNTSNAKDD 90

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    DN    +            + D     +F    +I   +    L +  +  A ++
Sbjct: 91  NKSTTDN---CLNKTGAACPTQDFLADD----LFSPQDAILTDKGKAALAQFAKKAARAS 143

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I  H           D W L+  R  S  + L  SGV E+ +  +   A       
Sbjct: 144 AYFMIESH--GIGNGTARFDKWELAAARTASVARQLKSSGVDENHLKIM--MAPDNPLAD 199

Query: 324 S 324
           +
Sbjct: 200 N 200



 Score = 39.9 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 55/176 (31%), Gaps = 17/176 (9%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN-----LMTASKGIFDE 86
            W + Y D +  ++ FF++++      +   K +         +           G    
Sbjct: 8   RWTVSYIDLLMTILGFFVLLYA----REHDPKEVADSLRSAFNHEDHNKQKNNGAGGSTL 63

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN--------QKKQYQRLENNIFYLSNSQ 138
           Q+   +++     +  ++  T N+ D    +T+               L +++F   ++ 
Sbjct: 64  QSDVNKTASPADAMKANDTNTSNAKDDNKSTTDNCLNKTGAACPTQDFLADDLFSPQDAI 123

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++  K +L + ++K         +E                         ++L+ 
Sbjct: 124 LTDKGKAALAQFAKKAARASAYFMIESHGIGNGTARFDKWELAAARTASVARQLKS 179


>gi|205374483|ref|ZP_03227279.1| hypothetical protein Bcoam_15431 [Bacillus coahuilensis m4-4]
          Length = 41

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 4/32 (12%), Positives = 15/32 (46%)

Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFF 48
          +++    +        W + ++D +T+++  F
Sbjct: 1  MRRDRRPEPPEKGAPKWMVTFSDLVTLILVIF 32


>gi|206602384|gb|EDZ38865.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 238

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 61/224 (27%), Gaps = 28/224 (12%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           +       ++       +DL   +             +  LA  R KR+     ++   L
Sbjct: 4   RGKGHGPEDQEDHWIPLSDLMTGLMMIFLLVAVSYMTDMELANYRIKRIAVRYNEVHDAL 63

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV----- 258
              +       +          +SI  +    +F   S    P    +L           
Sbjct: 64  YRDLEKEFKNDLPRWGAEIHRDLSIRFREPDVLFATGSDALKPRFQAILNDFFPRYVAIL 123

Query: 259 ----LAHSTEVISIRGHTDASPFRN-------IARDNWRLSLDRAYSAYQVLMKSGVSE- 306
                  S   I I GHT +   R+           N  LS  R  +    ++  G+   
Sbjct: 124 SSPKYRKSISEIRIEGHTSSFWNRSVSASSDDAYFRNMALSQARTRTTLAYVL--GLPSV 181

Query: 307 -------DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341
                    +   +G +  RL    +     + ++R++  V   
Sbjct: 182 SGKKGWLKGLLTANGLSSSRLIYDKNGEEDPALSQRVEFRVRTD 225


>gi|259907265|ref|YP_002647621.1| Outer membrane protein [Erwinia pyrifoliae Ep1/96]
 gi|224962887|emb|CAX54368.1| Outer membrane protein [Erwinia pyrifoliae Ep1/96]
 gi|283477078|emb|CAY72976.1| Uncharacterized 24.6 kDa protein in ccpA 3'region; ORF2 [Erwinia
          pyrifoliae DSM 12163]
          Length = 245

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
                      W I YAD MT +M  FLV+ + + +    +    +
Sbjct: 9  KKRRSDEAEKPFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQRAE 54


>gi|310765241|gb|ADP10191.1| Outer membrane protein [Erwinia sp. Ejp617]
          Length = 245

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67
                      W I YAD MT +M  FLV+ + + +    +    +
Sbjct: 9  KKRRSDEAEKPFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQRAE 54


>gi|111038072|ref|YP_709159.1| putative outer membrane protein [IncP-1 plasmid pKJK5]
 gi|110781077|emb|CAK02661.1| putative outer membrane protein [IncP-1 plasmid pKJK5]
          Length = 143

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 11/108 (10%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
              F  SS+   P   V           +  +I + G T  +           L+L RA 
Sbjct: 38  MVSFPDSSTTFQPPADVAAVLADAR---AASMIYVNGRTSTNRPSARDE---ILALKRAL 91

Query: 294 SAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSA--NRRIDILV 338
           SA + L+  GVS  +I    +  A +     +        N+R++I +
Sbjct: 92  SARKYLVDRGVSPLKIMVNFASAADY--VTENITPEGRYQNQRVEIEL 137


>gi|283856291|ref|YP_162352.2| hypothetical protein ZMO0617 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775287|gb|AAV89241.2| hypothetical protein ZMO0617 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 218

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 11/181 (6%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           ++     ++  +      D  +  N             K        +  D     +   
Sbjct: 31  EHDPKEVADSLRSAFNHEDHNRQKNNGAGGSALQSDVNKTAPPADAMKANDTNTSNAKDD 90

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    DN    +            + D     +F    +I   +    L +  +  A ++
Sbjct: 91  NKSTTDN---CLTKTGAACPTQDFLADD----LFSPQDAILTDKGKAALAQFAKKAARAS 143

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I  H           D W L+  R  S  + L  SGV E+ +  +   A       
Sbjct: 144 AYFMIESH--GIGNGTARFDKWELAAARTASVARQLKSSGVDENHLKIM--MAPDNPLAD 199

Query: 324 S 324
           +
Sbjct: 200 N 200



 Score = 39.9 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 55/176 (31%), Gaps = 17/176 (9%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN-----LMTASKGIFDE 86
            W + Y D +  ++ FF++++      +   K +         +           G    
Sbjct: 8   RWTVSYIDLLMTILGFFVLLYA----REHDPKEVADSLRSAFNHEDHNRQKNNGAGGSAL 63

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN--------QKKQYQRLENNIFYLSNSQ 138
           Q+   +++     +  ++  T N+ D    +T+               L +++F   ++ 
Sbjct: 64  QSDVNKTAPPADAMKANDTNTSNAKDDNKSTTDNCLTKTGAACPTQDFLADDLFSPQDAI 123

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            ++  K +L + ++K         +E                         ++L+ 
Sbjct: 124 LTDKGKAALAQFAKKAARASAYFMIESHGIGNGTARFDKWELAAARTASVARQLKS 179


>gi|257093021|ref|YP_003166662.1| hypothetical protein CAP2UW1_1409 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045545|gb|ACV34733.1| conserved hypothetical protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 398

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 10/136 (7%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
                    + V        + +    +     F   S    P  + + +   + L  ++
Sbjct: 265 KKPAMQAFGQLVEMGLASDRLAVRFDFKPGATAF---SQEQQPYALWLSEIAKQSLRQTS 321

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
             I + GHT  S    +     RLSL RA    Q L+ +  +  + +   G+   R  + 
Sbjct: 322 -CIEVAGHTRRSTSEQMDE---RLSLQRAEFIRQKLVATTPTLAKRTSAKGYGSQRAVVG 377

Query: 324 S---DPMNSANRRIDI 336
           +   +  ++ ++RI+ 
Sbjct: 378 TGKGNESDALDQRIEF 393


>gi|295675364|ref|YP_003603888.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1002]
 gi|295435207|gb|ADG14377.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1002]
          Length = 538

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 18/76 (23%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-----KISGFAHHRL 320
            ++ G TDA+     A  N +L+  RA +    L  +G++ED I       I+G      
Sbjct: 472 FTLSGFTDAT---GSADVNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITG------ 522

Query: 321 KIASDPMNSANRRIDI 336
              +D   +  RR+ I
Sbjct: 523 --GTDAKEA--RRVQI 534


>gi|165940117|ref|ZP_02228650.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165940373|ref|ZP_02228888.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165911693|gb|EDR30355.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165911940|gb|EDR30584.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
           str. IP275]
          Length = 512

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            +  +FD         +  +L      +       I + GHTD       A+ N  LSL 
Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499

Query: 291 RAYSAYQVLMK 301
           RA +    ++ 
Sbjct: 500 RAEALRDWMLS 510


>gi|229172879|ref|ZP_04300433.1| Excalibur domain protein [Bacillus cereus MM3]
 gi|228610624|gb|EEK67892.1| Excalibur domain protein [Bacillus cereus MM3]
          Length = 302

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 2/177 (1%)

Query: 37  YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           +A    +L  FFLV+ I++          +         +  A   I +  +    ++  
Sbjct: 66  FATLSLILFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFGALSSISNPSSEKTSATSK 125

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
           K+  +  E    +  +L+    ++K Q Q  E         +Q +  + +  +  ++  +
Sbjct: 126 KVASNNAEQNDSDKKELEKKEADEKTQKQENEKLQAEEQARKQEDEKRLADEQARKQQDE 185

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
             +  D +    +EE          K    + +KRL D   +        +AD   +
Sbjct: 186 QKRLADEQARKQQEEQKRQADEQARKQQ--EEQKRLADEQARKQQEEQKRIADEQAR 240


>gi|312196129|ref|YP_004016190.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
 gi|311227465|gb|ADP80320.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
          Length = 452

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 15/156 (9%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
             + A    +  +    D   +            +S+ DQ    +F + S+   P+  + 
Sbjct: 296 ASETAIPAENGAADEPVDFPAQPRPRPAGTGVFTVSLPDQ---VLFARDSNDLSPDADLT 352

Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS-EDRI 309
           L  +   +      V+++ GHTD +        N  LS  RA +    L+  G+    R 
Sbjct: 353 LTAVVSEVRGLRGSVVNVIGHTDTT---GTDAYNRLLSKSRADAVADALVARGLPVASRT 409

Query: 310 SKIS-----GFA-HHRLKIASDPMNSA-NRRIDILV 338
              S     G    HR     D      +RR+++++
Sbjct: 410 GAGSSIPGPGCGPEHRPDGTDDERAMRCDRRVELVI 445


>gi|251733453|emb|CAR82476.1| pal [Rhizobium gallicum]
          Length = 87

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + LA      I++ GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAAQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV   R+  IS +   R   
Sbjct: 58  YLSSRGVPAQRMKTIS-YGKERPVA 81


>gi|88798301|ref|ZP_01113887.1| hypothetical protein MED297_13622 [Reinekea sp. MED297]
 gi|88779077|gb|EAR10266.1| hypothetical protein MED297_13622 [Reinekea sp. MED297]
          Length = 232

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 21/181 (11%)

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
             +   + + +  L  K+ + L   + +     +          +SI   R   +FDK  
Sbjct: 39  AEIERNKIRDVAVLYDKLRTQLYQDLVNEFEPDLQTWGAEINPDLSIRFGRPELIFDKGE 98

Query: 242 SIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTDASPFRNIARD----NWRLS 288
           +    E  V+L             E        + I GHT +        +    N  LS
Sbjct: 99  NDLKDEFEVILSDFFPRYLNIIASEKYREDIAEVRIEGHTSSGWVSRGEDEAYILNMGLS 158

Query: 289 LDRAYSAYQVLMKS-GVSEDR-----ISKISGFAHHRLK--IASDPMNSANRRIDILVED 340
             R  S  + L++   V  ++         +G +  +     + +  +  +RR++  +  
Sbjct: 159 QARTRSTLEFLLQLPAVQAEKAWLKEHMTANGLSSSKPILQTSGEEDSERSRRVEFRLRT 218

Query: 341 R 341
            
Sbjct: 219 D 219


>gi|261878767|ref|ZP_06005194.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334627|gb|EFA45413.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 317

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 77/258 (29%), Gaps = 7/258 (2%)

Query: 57  TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116
            D   + A      P+  +  T             R  Q    + +   +++    + + 
Sbjct: 44  MDILRRVAASNKRTPYRSHRGTTPYTSGAAPYRYNRGYQPGSTVPVYNTVSRQVESIPVY 103

Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176
                     L  N        ++   +    +  ++  D  +        N ++     
Sbjct: 104 VPQGAGMNPYLPYNNLQNPQEDRARRDEYQQAQLLQEEIDQLQEQLRNLGQNMQDPAVKH 163

Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236
            L          +KR    A  +   L      ++ +  + E  ++ +            
Sbjct: 164 QLDSMANHLNTLQKRQ---ASSLEKPLVENGPKSMEQPQVDEQAKSIMTTPFETNMRQVF 220

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F+ SS     E    L+ + ++L  + +  + + GH            N  L+  R  S 
Sbjct: 221 FEISSDKLTNEAKQTLKAVADLLVDNRDLKVKLTGHASKD---GPDAFNQNLAKRRMQSV 277

Query: 296 YQVLMKSGVSEDRISKIS 313
              L++ GV  +++S +S
Sbjct: 278 KSNLLRHGVKANQMSTLS 295


>gi|217076142|ref|YP_002333858.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
 gi|217035995|gb|ACJ74517.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
          Length = 217

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 64/169 (37%), Gaps = 26/169 (15%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             ++ RL+++    +  +  LV       +  +       I I +     +F+ +     
Sbjct: 38  QNKETRLKEIIGIKAKIVEELVNTFKDLDLEIQVDPNSGAIIINND---ILFNYNDYTLS 94

Query: 246 PETIVVLQKIGEVL---------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            +   +L K+ +                   + G++D +        N  LS+ RA+  +
Sbjct: 95  TKGKNILLKVIKTYLNVILKPEYETYIAEFYLEGNSDPT---GTYEYNIDLSMKRAFEVF 151

Query: 297 QVLMKSGVSE--------DRISKISGFAHHRLKIASDPMN-SANRRIDI 336
           + L ++ + E         ++  +SG  ++   I +  +N + +RR+++
Sbjct: 152 KYLREN-LDEIPYQELFFKKLV-VSGKGYNNPIIENGKINYTKSRRVEL 198


>gi|119488988|ref|ZP_01621923.1| hypothetical protein L8106_19541 [Lyngbya sp. PCC 8106]
 gi|119454944|gb|EAW36087.1| hypothetical protein L8106_19541 [Lyngbya sp. PCC 8106]
          Length = 891

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
              ++    K I  +    V           +  + + +  +       F+ +S     E
Sbjct: 732 EPDQVTIEGKVIHQSDWENVTQAFENIEGVNSVVSTLQVEPVPIATRVYFNLNSDEFRSE 791

Query: 248 -TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
             I+ +  + + L       + I G++           N +L+L R+ +    L   G+ 
Sbjct: 792 DMIIKIYPVSQYLKQYPNLKVRIVGYSHPGEKTKKNSKNSKLALKRSQAVQIALESYGID 851

Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRI--DILVEDRQG 343
             R++ I G       +  +  +  +R +  +I++ + QG
Sbjct: 852 RRRMTAI-GKNERPPGVEENQPDWLSRAVIFEIILPEDQG 890


>gi|28275237|ref|NP_783492.1| outer membrane protein OmpA weak-like protein [Shewanella
           oneidensis MR-1]
          Length = 49

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 299 LMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341
           +   G+  +R+  + G         +        NRR+++++ D+
Sbjct: 1   MQGQGIQSNRLISL-GKGESDPVANNKSASGRQQNRRVEVIITDK 44


>gi|113475537|ref|YP_721598.1| hypothetical protein Tery_1869 [Trichodesmium erythraeum IMS101]
 gi|110166585|gb|ABG51125.1| hypothetical protein Tery_1869 [Trichodesmium erythraeum IMS101]
          Length = 253

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 53/199 (26%), Gaps = 44/199 (22%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             + K+  + L  +   +                     I+I+  +  +   F   S+  
Sbjct: 58  ENRVKQLTKSLDFEKEKSSELYKKLTAETSARIPQFPPNIVITAAEGYD---FPSGSAEL 114

Query: 245 LPETIVV-----LQKIGEVLAHST-EVISIRGHTDASPFRNI------------------ 280
                       L+ I E +       + + GHTD  P  +                   
Sbjct: 115 TDALNKYIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNLDGLVEEVASGSKSI 174

Query: 281 ----ARDNWRLSLDRAYSAYQVLMK--------SGVSEDRISKISGFAHHRLKI-----A 323
                  N  L + RA +  + L           G+   +  +        LK       
Sbjct: 175 KELQEGSNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQP 234

Query: 324 SDPMNSANRRIDILVEDRQ 342
           ++  +   RRI+I   + +
Sbjct: 235 NENPDQQRRRIEIRFTNSE 253


>gi|288924574|ref|ZP_06418511.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|288338361|gb|EFC76710.1| conserved hypothetical protein [Prevotella buccae D17]
          Length = 151

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 14/160 (8%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
             + +  +  L  +++   +       +     +      +   +    +  F+ + +  
Sbjct: 2   KAQYQNEIDGLRNQLNDANAENDRLRNMLANQPKAETPAAVKEFVQTPISVFFNLNKTNI 61

Query: 245 -LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
              + +V +Q + +    +   + + G+ D+         N  LS +RA +    L K G
Sbjct: 62  ASQKDLVNVQALAKYAKENNSKLLVNGYADS--ATGKPAHNQWLSEERAKTVAGELQKMG 119

Query: 304 VSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340
           +    I+   G                 S NRR  + V +
Sbjct: 120 IDSSNITT-KGNGGVDELSPI-------SFNRRATVQVTE 151


>gi|34557279|ref|NP_907094.1| hypothetical protein WS0889 [Wolinella succinogenes DSM 1740]
 gi|34482995|emb|CAE09994.1| Z5895 PROTEIN [Wolinella succinogenes]
          Length = 236

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 56/194 (28%), Gaps = 24/194 (12%)

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
                +  +   L   ++E      +   +    + +   L   +     K +       
Sbjct: 27  SYMVSSAYDRKNLEKKNRELRELNDKIGDVAKTFETLQLELYNDLIKEFSKDLTSWNATI 86

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTD 273
               +I  +    +FD   S       VVL             E      E I I GHT 
Sbjct: 87  DPDNTIRFKEPDVLFDSGKSQVKERFKVVLDDFFPRYVKILSQEKYKGDIEEIRIEGHTS 146

Query: 274 ASPFRN-----IARDNWRLSLDRAYSAYQV---LMKSGVSED---RISKISGFAHHRLKI 322
           +              N  LS  RA+   +    L +    +D   ++ + +G +  +   
Sbjct: 147 SEWLNAKTLEERYLGNAALSQARAFEVLKYCFALERIKGEQDWLIKVLRANGLSFAKPLD 206

Query: 323 ASDPMNSANRRIDI 336
           + +      RR++ 
Sbjct: 207 SEEHS----RRVEF 216


>gi|282878140|ref|ZP_06286937.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281299718|gb|EFA92090.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 384

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 9/141 (6%)

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +   VA         E     +   +   R    F  +S+         ++++ + L
Sbjct: 249 EPVVEEHVAPAPAPAPAPEVKEEVVETKVEPFRRDVFFLINSAKIRATEANKIKEMVDYL 308

Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAH 317
             +     S+ G+ DA       R N RL   RA    + L  K  ++ DRI   S  A 
Sbjct: 309 NANPNTKVSVTGYADA--GTGNNRINDRLGRLRAQIVVKTLKEKYNIAADRIISDSKGAR 366

Query: 318 HRLKIASDPMNSANRRIDILV 338
            +    ++     N R+ I +
Sbjct: 367 VQPFAQNN----KN-RVTICI 382


>gi|328469634|gb|EGF40570.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
          Length = 282

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +       +   L ++ + L +   + + I G  D+         N  L+  RA +
Sbjct: 178 LFPVNEYELTQASKETLLQLIQKLKNLPVKELVIYGIADS---SGSYAKNRVLADRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA--NRR--IDILVED 340
               L++ G+   R   I+        + +  +        RR  ID+ ++ 
Sbjct: 235 VRDFLVEEGL---RNVSIAIRG----TVENGLETAEQRVKQRRFSIDVRLKS 279


>gi|221271472|dbj|BAH15024.1| putative outer membrane protein [Vibrio parahaemolyticus]
          Length = 282

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +       +   L ++ + L +   + + I G  D+         N  L+  RA +
Sbjct: 178 LFPVNEYELTQASKETLLQLIQKLKNLPVKELVIYGIADS---SGSYAKNRVLADRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA--NRR--IDILVED 340
               L++ G+   R   I+        + +  +        RR  ID+ ++ 
Sbjct: 235 VRDFLVEEGL---RNVSIAIRG----TVENGLETAEQRVKQRRFSIDVRLKS 279


>gi|4378863|gb|AAD19731.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 201

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 11/181 (6%)

Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203
           ++     ++  +      D  +  N             K        +  D     +   
Sbjct: 14  EHDPKEVADSLRSAFNHEDHNRQKNNGAGGSALQSDVNKTAPPADAMKANDTNTSNAKDD 73

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           +    DN    +            + D     +F    +I   +    L +  +  A ++
Sbjct: 74  NKSTTDN---CLTKTGAACPTQDFLADD----LFSPQDAILTDKGKAALAQFAKKAARAS 126

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I  H           D W L+  R  S  + L  SGV E+ +  +   A       
Sbjct: 127 AYFMIESH--GIGNGTARFDKWELAAARTASVARQLKSSGVDENHLKIM--MAPDNPLAD 182

Query: 324 S 324
           +
Sbjct: 183 N 183


>gi|319794925|ref|YP_004156565.1| ompa/motb domain protein [Variovorax paradoxus EPS]
 gi|315597388|gb|ADU38454.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
          Length = 186

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 11/111 (9%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I +++      F   S+   P     L  + + +  S   + + G  D +     A  N 
Sbjct: 81  IRVVNGVVNFYFATGSADLAPGAAEALAAVIKGV-ESGRKVVVSGFHDTT---GDAAINE 136

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRID 335
            L+  RA     VL+  GV   ++         + ++ +    N+  RR++
Sbjct: 137 SLAKKRAEMVRDVLVGLGVPAAKVDL------QKPEVTAGSGNNAEARRVE 181


>gi|228910335|ref|ZP_04074151.1| hypothetical protein bthur0013_44820 [Bacillus thuringiensis IBL
          200]
 gi|228849287|gb|EEM94125.1| hypothetical protein bthur0013_44820 [Bacillus thuringiensis IBL
          200]
          Length = 81

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%)

Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92
           +T+L A F+V++ +++ D    K +   F           + + D++   E+
Sbjct: 1  MLTLLFALFIVLFAMSSIDAAKFKQMAVAFRSELAGGTGNKEFLSDQKPNDEK 53


>gi|251733465|emb|CAR82482.1| pal [Agrobacterium rubi]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    LQ+  + LA      I++ GH D          N  L   RA +  +
Sbjct: 1   TDSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   R   
Sbjct: 58  FLASQGVPANRMKTIS-YGKERPVA 81


>gi|260899852|ref|ZP_05908247.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308107254|gb|EFO44794.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
          Length = 282

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +       +   L ++ + L +   + + I G  D+         N  L+  RA +
Sbjct: 178 LFPVNEYELTQASKENLLQLIQKLNNLPVKELVIYGIADS---SGSYAKNRVLADRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA--NRR--IDILVED 340
               L++ G+   R   I+        + +  +        RR  ID+ ++ 
Sbjct: 235 VRDFLVEEGL---RNVSIAIRG----TVENGLETAEQRVKQRRFSIDVRLKS 279


>gi|213963104|ref|ZP_03391362.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
           sputigena Capno]
 gi|213954188|gb|EEB65512.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
           sputigena Capno]
          Length = 419

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           +        +    +     +   +       L++ +     + K+L D  K+I +    
Sbjct: 234 TQVTAGVVYRFKGSNGAHHFTTAAQAPDNSAELARLRDELNGKNKQLADNQKQIKNLQDE 293

Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE- 264
           L A    K  + E   T    ++    +   F  + S      +  +++I   L      
Sbjct: 294 LEAARNKKPEVVEKVVTKNKKTL---ESVVTFRVAKSTIDASQLPNVERIASYLNKYRNA 350

Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK-ISGFAH 317
            +SI+G+            N +L+  RA +   +L+K   +S DRI    +G   
Sbjct: 351 KVSIKGYASPE---GDLEKNKKLATARAEAVKTLLVKRYKISADRIEAEGNGIGD 402


>gi|224026446|ref|ZP_03644812.1| hypothetical protein BACCOPRO_03202 [Bacteroides coprophilus DSM
           18228]
 gi|224019682|gb|EEF77680.1| hypothetical protein BACCOPRO_03202 [Bacteroides coprophilus DSM
           18228]
          Length = 398

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238
            + K +       + D+  +++                       + +  +   +  +F 
Sbjct: 241 DRSKTVTRYDNAAINDMRAQLNKLTEENERLQKA-IAEGNQKAAEVAVRKVASGSLIVFA 299

Query: 239 KSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
              +    E  V L  + EV+    S  V +I G++DA       + N +LS +RA + +
Sbjct: 300 MGQTELSNEARVNLGMLAEVIKSSDSNTVYTITGYSDA--GTGSKKRNEQLSKERAQAVF 357

Query: 297 QVLMKS-GVSEDRI 309
             L K  GVS  ++
Sbjct: 358 DCLTKEFGVSASQL 371


>gi|251733443|emb|CAR82471.1| pal [Mesorhizobium mediterraneum]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + L    +   +  GH D          N  L   RA +   
Sbjct: 1   TDSSSIRADAQTTLSRQAQWLNQYGQYAIVIEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L+  GVS  R+  IS +   R   
Sbjct: 58  FLVARGVSGQRLKTIS-YGKERPVA 81


>gi|153827984|ref|ZP_01980651.1| putative OmpA domain protein [Vibrio cholerae 623-39]
 gi|148876565|gb|EDL74700.1| putative OmpA domain protein [Vibrio cholerae 623-39]
          Length = 282

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +       +   L ++ + L     + + I G  D+     +   N  L+  RA +
Sbjct: 178 LFPVNEFELTQASKETLLQLIQKLNKLPVKELVIYGVADS---SGLYAKNRVLADRRALA 234

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA--NRR--IDILVED 340
               L++ GV   R   I         + +  +        RR  ID+ +++
Sbjct: 235 VRNFLIEEGV---RGISIMTRGS----VENGLETAEQRVKQRRFSIDVRLKN 279


>gi|153215426|ref|ZP_01950010.1| hypothetical protein A55_B0269 [Vibrio cholerae 1587]
 gi|124114720|gb|EAY33540.1| hypothetical protein A55_B0269 [Vibrio cholerae 1587]
          Length = 275

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +       +   L ++ + L     + + I G  D+     +   N  L+  RA +
Sbjct: 171 LFPVNEFELTQASKETLLQLIQKLNKLPVKELVIYGVADS---SGLYAKNRVLADRRALA 227

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA--NRR--IDILVED 340
               L++ GV   R   I         + +  +        RR  ID+ +++
Sbjct: 228 VRNFLIEEGV---RGISIMTRGS----VENGLETAEQRVKQRRFSIDVRLKN 272


>gi|167722110|ref|ZP_02405346.1| hypothetical protein BpseD_24064 [Burkholderia pseudomallei DM98]
          Length = 43

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%)

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340
           L  +GV   R+  + G         +      + NRR++I V  
Sbjct: 1   LQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 43


>gi|154251303|ref|YP_001412127.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154155253|gb|ABS62470.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 157

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           + D+     F+ +SS   P+      +I + LA       I     AS      + N  L
Sbjct: 46  LFDKNYYIYFETNSSRIDPKYDKEFARIVK-LAKGQNAQQICVFGKASKI-GNQQGNINL 103

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKIS 313
           S  RA +    L   G    ++  ++
Sbjct: 104 SNKRAQNVAAALEAQGWPRSKMVTLA 129


>gi|295085991|emb|CBK67514.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Bacteroides xylanisolvens XB1A]
          Length = 386

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +E +     +++    A K  + LQ+  +K++   + L      +  + + T      
Sbjct: 215 DQQEVDVLNAKINELHTQAGKDAEALQEAVRKVTELEAALNKCRNQEPKIVKDTIDNTKK 274

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           ++    +   F +  +      +  +++I   L +       I+G+            N 
Sbjct: 275 TL---ESVITFRQGRTTVDNSQLPNVERIATYLKNHKGASVLIKGYASPE---GSLEVNE 328

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
           R++  RA +  ++L+ K G++E+RI    G  
Sbjct: 329 RIARQRAEAVKKMLVGKYGIAEERIVA-EGQG 359


>gi|260591570|ref|ZP_05857028.1| putative immunoreactive antigen PG32 [Prevotella veroralis F0319]
 gi|260536479|gb|EEX19096.1| putative immunoreactive antigen PG32 [Prevotella veroralis F0319]
          Length = 376

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 12/130 (9%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+  L     + I K V+ E     +    +       F +  S    
Sbjct: 244 RDQAEIDALNAQINE-LRNRKPEVITKEVVKEVPAVKVKEFTVSDLVFVTFAQGKSALTN 302

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +    L  + E +      + + G    +        N RLS  RA      L   GV  
Sbjct: 303 DAKAALNNVKEGV-----HVQVVG---TASPEGSKELNDRLSQARADVVANYLKGRGVI- 353

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 354 --VDEATGKG 361


>gi|255320271|ref|ZP_05361456.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
 gi|255302710|gb|EET81942.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
          Length = 243

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
                      W I +AD MT LM  FLV+  ++      K
Sbjct: 9  KPRSKDEGEKPFW-ISFADLMTALMTLFLVVMAVSLMVVTKK 49


>gi|251733507|emb|CAR82503.1| pal [Sinorhizobium saheli]
 gi|251733509|emb|CAR82504.1| pal [Sinorhizobium saheli]
 gi|251733511|emb|CAR82505.1| pal [Sinorhizobium saheli]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I+I GH D          N  L   RA +  +
Sbjct: 1   TDSSSIRADAQATLDRQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAAATKE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  YLASRGVPANRMRTIS-YGKEKPVA 81


>gi|251771203|gb|EES51784.1| hypothetical protein UBAL3_95450004 [Leptospirillum
           ferrodiazotrophum]
          Length = 236

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 28/142 (19%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTDASP 276
           +SI  +    +F   S    P    +L             +   HS   I I GHT +  
Sbjct: 84  LSIRFREPDVLFTTGSDALNPRFKAILDNFFPRYIAILDSKKYRHSITEIRIEGHTSSFW 143

Query: 277 FRN-------IARDNWRLSLDRAYSAYQVLMK----SGVSE--DRISKISGFAHHRLKIA 323
            +           +N  LS  R  S    +M+    SG      R+   +G +  RL   
Sbjct: 144 NKGTPPNSDAAYFNNMALSQARTRSTLLYVMELPAVSGERPWLKRVLTANGLSSSRLIYR 203

Query: 324 S----DPMNSANRRIDILVEDR 341
           S    DP+ S   R++  V+  
Sbjct: 204 SDGREDPVRSQ--RVEFRVKTD 223


>gi|251733477|emb|CAR82488.1| pal [Sinorhizobium fredii]
 gi|251733479|emb|CAR82489.1| pal [Sinorhizobium fredii]
 gi|251733481|emb|CAR82490.1| pal [Sinorhizobium fredii]
 gi|251733483|emb|CAR82491.1| pal [Sinorhizobium fredii]
 gi|251733519|emb|CAR82509.1| pal [Sinorhizobium xinjiangense]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I++ GH D          N  L   RA +  +
Sbjct: 1   TDSSSIRADAQATLARQAQWLAKYPNYAITVEGHADER---GTREYNLALGARRAAATRE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  YLAGQGVPANRMRTIS-YGKEKPVA 81


>gi|251733521|emb|CAR82510.1| pal [Sinorhizobium xinjiangense]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I + GH D          N  L   RA +  +
Sbjct: 1   TDSSSIRADAQATLARQAQWLAKYPNYAIIVEGHADER---GTREYNLALGARRAAATRE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  YLAGQGVPANRMRTIS-YGKEKPVA 81


>gi|255008024|ref|ZP_05280150.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313145740|ref|ZP_07807933.1| outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313134507|gb|EFR51867.1| outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 378

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +     L K+ ++  + +      K  + +         I    +T  F  +SS      
Sbjct: 233 EANYTSLKKENAAQQAEIAELKARKPEVIKEETVIDNSEIKALPSTITFPFNSSKIELSQ 292

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSE 306
            V +  I E L  + E+   + G+ D        + N  +S  RA +  +V + K G+++
Sbjct: 293 EVSIFNIAEFLKANPEIRVRLTGYADKR---GSEQANRIVSERRANAVTEVFVNKYGIAK 349

Query: 307 DRISK 311
           DRI+ 
Sbjct: 350 DRITT 354


>gi|119486989|ref|ZP_01620861.1| hypothetical protein L8106_18771 [Lyngbya sp. PCC 8106]
 gi|119455918|gb|EAW37052.1| hypothetical protein L8106_18771 [Lyngbya sp. PCC 8106]
          Length = 259

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 63/207 (30%), Gaps = 36/207 (17%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
           +S+++        L ++   +  R   L+    ++   L    +         E  ++  
Sbjct: 45  QSVSEANASLSEQLERQLQQSSNRVNDLEGEIARMRGDLKQRSSRITELNQEIERLKSPP 104

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVIS-----IRGHTDASPFR 278
           +I + D      F+  S+         +++   E +  S +        + GHTD     
Sbjct: 105 IIVLRDSTERK-FESGSAELSEPLNQFIEQDLVEQIKTSAQDYQGYIVEVIGHTDGQVNT 163

Query: 279 NIAR----------------------DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
                                      N  L L RA +  + L ++   ++   K   ++
Sbjct: 164 GNYSNLDSNLEQVLQGNESLNQLIPGSNADLGLMRALAVVEKLQENQELQELGLKFKAYS 223

Query: 317 HHRLKIASDPMNSAN-------RRIDI 336
             +L   S      N       RRI+I
Sbjct: 224 AAQLYNPSGDYAPQNRAANPNRRRIEI 250


>gi|251733457|emb|CAR82478.1| pal [Rhizobium leguminosarum]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA       ++ GH D          N  L   RA +A  
Sbjct: 1   TDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARRAAAAKD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV   R+  IS +   R   
Sbjct: 58  YLASRGVPAQRLKTIS-YGKERPVA 81


>gi|296102166|ref|YP_003612312.1| OmpA/MotB domain-containing protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056625|gb|ADF61363.1| OmpA/MotB domain-containing protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 475

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282
           +   II   +  +FD       P T  +L      +      + +  GHTD++      +
Sbjct: 394 VAPKIIRLDSMSLFDTGKWALKPGTTKLLVNSLVGIKAKPGWLIVIAGHTDST---GDDQ 450

Query: 283 DNWRLSLDR 291
            N  LSL R
Sbjct: 451 SNQVLSLRR 459


>gi|265762730|ref|ZP_06091298.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255338|gb|EEZ26684.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 378

 Score = 46.5 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +     L K+ ++  + +      K  + +         I    +T  F  +SS      
Sbjct: 233 EANYATLKKENAAQQAEIAELKARKPEIVKEETIIDNSEIKALPSTITFPFNSSKIELSQ 292

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSE 306
            V +  I E L  + E+   + G+ D        + N  +S  RA +  +V + K G+++
Sbjct: 293 EVSIFNIAEFLKANPEIRVRLTGYADKR---GSEQANRIVSERRANAVTEVFVNKYGIAK 349

Query: 307 DRISK 311
           DRI+ 
Sbjct: 350 DRITT 354


>gi|251733439|emb|CAR82469.1| peptidoglycan-associated lipoprotein [Sinorhizobium americanum]
          Length = 87

 Score = 46.5 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             SS    +    L +  + LA      I+I GH D          N  L   RA +  +
Sbjct: 1   TDSSSIRADAQATLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAAATRE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   +   
Sbjct: 58  YLAGQGVPANRMRTIS-YGKEKPVA 81


>gi|60680803|ref|YP_210947.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|253563384|ref|ZP_04840841.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|60492237|emb|CAH07002.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
 gi|251947160|gb|EES87442.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 378

 Score = 46.5 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +     L K+ ++  + +      K  + +         I    +T  F  +SS      
Sbjct: 233 EANYATLKKENAAQQAEIAELKARKPEIVKEETIIDNSEIKALPSTITFPFNSSKIELSQ 292

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSE 306
            V +  I E L  + E+   + G+ D        + N  +S  RA +  +V + K G+++
Sbjct: 293 EVSIFNIAEFLKANPEIRVRLTGYADKR---GSEQANRIVSERRANAVTEVFVNKYGIAK 349

Query: 307 DRISK 311
           DRI+ 
Sbjct: 350 DRITT 354


>gi|269123378|ref|YP_003305955.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
           12112]
 gi|268314704|gb|ACZ01078.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 601

 Score = 46.5 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 50/159 (31%), Gaps = 20/159 (12%)

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
           +  IN +E      + +E I+      +L DL  K++  +  L              +  
Sbjct: 432 QFGINGKEKTNEIIVERENIINRDELDKLNDLNNKLNQRIDELE----------RRLKAF 481

Query: 224 ILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRN 279
             I I +     +  +             +L+ I   L  +       I G+TD     +
Sbjct: 482 EDIKINEDELYTLTGYKTGKFELTNSQEEILKDIVRELNENYRNRKIYITGYTDTM---S 538

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSED---RISKISGF 315
               N  L L RA    + L   G+      R    SG+
Sbjct: 539 NEDLNLELGLKRANVVAKKLRALGLDMSISIRKVSSSGY 577


>gi|261415554|ref|YP_003249237.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372010|gb|ACX74755.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327335|gb|ADL26536.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 205

 Score = 46.5 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 8/116 (6%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARD 283
           SI     + +F+ +S+    E   V+  +G   A +    +   + G+T           
Sbjct: 95  SIEFPNVSSLFELASAELSSEGRAVIATVGSKFAQTNIDAASLLVEGYTCDL---GSVAY 151

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           N  LS  RA +      K  +   +I+    +     K          RR+++ ++
Sbjct: 152 NDELSQRRAETVKAEFSKY-IPASKITA-KWYGKRMFKKFKYGSREEYRRVNVRIQ 205


>gi|254459054|ref|ZP_05072477.1| type I secretion outer membrane protein, TolC, putative
           [Campylobacterales bacterium GD 1]
 gi|207084325|gb|EDZ61614.1| type I secretion outer membrane protein, TolC, putative
           [Campylobacterales bacterium GD 1]
          Length = 604

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 8/116 (6%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWR 286
           ++ +  +F+  S+         L K+   +           + G+ +            +
Sbjct: 489 ERYSGFLFEDGSANLTGAGQDRLNKLITQIQPYGWDNLKFDVLGNVEDEKMTEEQL--LQ 546

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340
           LS  RA +    L ++G + D    +   A      +++  +S   N R DI+V  
Sbjct: 547 LSQQRAETIKTKLTEAGANVD-FIVLHSKADTAPMFSNESDDSIELNNRADIIVRK 601


>gi|53712590|ref|YP_098582.1| putative outer membrane protein [Bacteroides fragilis YCH46]
 gi|52215455|dbj|BAD48048.1| putative outer membrane protein [Bacteroides fragilis YCH46]
          Length = 378

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +     L K+ ++  + +      K  + +         I    +T  F  +SS      
Sbjct: 233 EANYATLKKENAAQQAEIAELKARKPEIVKEETVIDNSEIKALPSTITFPFNSSKIELSQ 292

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSE 306
            V +  I E L  + E+   + G+ D        + N  +S  RA +  +V + K G+++
Sbjct: 293 EVSIFNIAEFLKANPEIRVRLTGYADKR---GSEQANRIVSERRANAVTEVFVNKYGIAK 349

Query: 307 DRISK 311
           DRI+ 
Sbjct: 350 DRITT 354


>gi|269123921|ref|YP_003306498.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Streptobacillus moniliformis
           DSM 12112]
 gi|268315247|gb|ACZ01621.1| Outer membrane protein and related peptidoglycan- associated
           (lipo)protein-like protein [Streptobacillus moniliformis
           DSM 12112]
          Length = 151

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+ +        + ++  +   L +    I + G+TD        + N  L L RA S  
Sbjct: 89  FNSNKFTLNKNQMAIIDALITNLENKE--IIVVGYTDTD---GNDKYNLNLGLSRANSVK 143

Query: 297 QVLMKSGV 304
             L   G+
Sbjct: 144 AYLESKGI 151


>gi|262372083|ref|ZP_06065362.1| small protein A (tmRNA-binding) [Acinetobacter junii SH205]
 gi|262312108|gb|EEY93193.1| small protein A (tmRNA-binding) [Acinetobacter junii SH205]
          Length = 181

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 21/115 (18%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD+S++  +      +  I + +  S     + + G  D          N +LS  R  +
Sbjct: 73  FDRSNANAIEHGSDSVTSIAQRIKQSNATGPVIVAGFADPL---GKFAYNQQLSSQRVNT 129

Query: 295 AYQVLMKSGVSEDRI-----------SKISGF-AHHRLKIASDPMNSANRRIDIL 337
             ++L   G+  +RI            + +G  A+++L        + NRR++I+
Sbjct: 130 VAKLLFNEGIDVNRIQIQANSQTDLYQQCAGHKANNQLVN----CLAPNRRVNII 180


>gi|253570786|ref|ZP_04848194.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839735|gb|EES67818.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 372

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +E +     +++    A K  + LQ+  +K++   + L      +  + + T      
Sbjct: 201 DQQEVDVLNAKINELHTQAGKDAEALQEAVRKVTELEAALDKCRNQEPKIVKDTIDNTKK 260

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           ++    +   F +  +      +  +++I   L +       I+G+            N 
Sbjct: 261 TL---ESVITFRQGRTTVDNSQLPNVERIATYLKNHKGASVLIKGYASPE---GSVEVNE 314

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
           R++  RA +  ++L+ K G++E+RI    G  
Sbjct: 315 RIARQRAEAVKKMLVGKYGIAEERIVA-EGQG 345


>gi|301162300|emb|CBW21845.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 378

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +     L K+ ++  + +      K  + +         I    +T  F  +SS      
Sbjct: 233 EANYATLKKENAAQQAEIAELKARKPEIVKEETIIDNSEIKALPSTITFPFNSSKIELSQ 292

Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSE 306
            V +  I E L  + E+   + G+ D        + N  +S  RA +  +V + K G+++
Sbjct: 293 EVSIFNIAEFLKANPEIRVRLTGYADKR---GSEQANRIVSERRANAVTEVFVNKYGIAK 349

Query: 307 DRISK 311
           DRI+ 
Sbjct: 350 DRITT 354


>gi|289661540|ref|ZP_06483121.1| hypothetical protein XcampvN_00160 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 145

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 11/104 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F  +S+  LP T   +  +  ++A     + +RG TD     +      R++  RA +A 
Sbjct: 44  FRWNSAQFLP-TPAQVAHLRGLIAAGVAHVQVRGRTDNPNPSSGDE---RIARGRAEAAK 99

Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASD---PMNSANRRIDI 336
             L+  GV    I         ++   +++      + NRR+DI
Sbjct: 100 DWLIGEGVPSGIIDLNFVSAGDYQ---SNNRLSDGRALNRRVDI 140


>gi|332881603|ref|ZP_08449252.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680601|gb|EGJ53549.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 382

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F  + + P       L ++   L  +    + + G+ DA+        N  L+  RA   
Sbjct: 282 FSVNRNKPNEGQETQLYEVARFLHDNPGAAVCVEGYADAT--SGSEAYNRELAGQRAEYV 339

Query: 296 YQVLM-KSGVSEDRISK 311
            + L+ K GV   +++ 
Sbjct: 340 KKQLVDKYGVRSSQVTT 356


>gi|251733451|emb|CAR82475.1| pal [Rhizobium giardinii]
          Length = 87

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L K  + L       I+I GH D          N  L   RA +   
Sbjct: 1   TDSTSIRADAQATLDKQAQWLQRYPNYAITIEGHADER---GTREYNLALGARRAAATRD 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   G+   ++  IS +   +   
Sbjct: 58  YLASRGIPAGKMKTIS-YGKEKPVA 81


>gi|262273543|ref|ZP_06051357.1| hypothetical protein VHA_000519 [Grimontia hollisae CIP 101886]
 gi|262222521|gb|EEY73832.1| hypothetical protein VHA_000519 [Grimontia hollisae CIP 101886]
          Length = 284

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIV 250
           LQD    I S     V  ++V           + IS    RNT + F   +         
Sbjct: 131 LQDREGDIQSVQITNVNFSVVAEAFNACRAQLLPISYGTARNTVLNFANGAFEVDAGNAK 190

Query: 251 VLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            L  I E++A   S   + I G+      R+    N RLS  RA     +L++SGV   +
Sbjct: 191 DLASIAELIASDSSINKVLIDGYAGDYSDRSA---NLRLSQSRAEEVASLLVESGVPLSK 247

Query: 309 ISKISGFAHHRLKIASDPM 327
           + +I         +  +  
Sbjct: 248 L-EIRWHGDRY-IVTEESE 264


>gi|312132202|ref|YP_003999542.1| hypothetical protein Lbys_3541 [Leadbetterella byssophila DSM
           17132]
 gi|311908748|gb|ADQ19189.1| hypothetical protein Lbys_3541 [Leadbetterella byssophila DSM
           17132]
          Length = 399

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 14/266 (5%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           +VM+     D D    I +  +      +  S  + ++  P     +            +
Sbjct: 134 VVMFS-KDMDKDQMVKILREHHEPLIKAIPES--LLEKMIPSLGLHELLGSKPTPIKKVE 190

Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168
                K+      K     E                  L           ++        
Sbjct: 191 TPNAPKVKEETPAKAPVYPEIQKESSGAGIWIGVLLGILILGGGAYWYYTQNGGFNFFSK 250

Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228
           KE          E+ +A++  K      K   S ++        K +L ++   G     
Sbjct: 251 KEVPVESVETPVEEEIAIEEPKVETTEVKVTPSPITESEFSAFKKYILNKSEAAGKEFEF 310

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288
                   F   S      ++ V+  I  ++  ++    ++    A         N    
Sbjct: 311 KSIN----FVTDSVTLHSTSVAVIDSIATLMKENS---RLQVKITAFSASGDTPFN---- 359

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISG 314
             RA++  +VL K+G+   RI  +SG
Sbjct: 360 NKRAFAVKRVLTKNGIPAVRIDAVSG 385


>gi|228941689|ref|ZP_04104236.1| hypothetical protein bthur0008_43250 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228817901|gb|EEM63979.1| hypothetical protein bthur0008_43250 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 80

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F        T +K    +Q P E    +   
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPNEEKELSASS 59

Query: 100 LSIDEHITKNSVDLKIGSTNQ 120
           L  ++   +     K    + 
Sbjct: 60  LEAEQAKKQEEARAKRKKRDG 80


>gi|119947015|ref|YP_944695.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Psychromonas ingrahamii 37]
 gi|119865619|gb|ABM05096.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins-like protein [Psychromonas ingrahamii 37]
          Length = 220

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 16/117 (13%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           + +  K    +  L       G+  E       I+++D     +FD +      E    L
Sbjct: 52  EQIQNKRVIVIQALQEQFNANGISAEINPETGDITLLDS---VLFDFNKKQLKQEGKDFL 108

Query: 253 Q----------KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
                         + ++     + I GHT +         N +LSL RA S +Q +
Sbjct: 109 IKFIPVYSGVIFSEDGISDEINRVIIEGHTSSD---GSLGYNMQLSLGRANSVFQYI 162


>gi|298384208|ref|ZP_06993768.1| immunoreactive antigen PG32 [Bacteroides sp. 1_1_14]
 gi|298262487|gb|EFI05351.1| immunoreactive antigen PG32 [Bacteroides sp. 1_1_14]
          Length = 372

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +E +     +++    A K  + LQ+  +K++   + L      +  + + T      
Sbjct: 201 DQQEVDVLNAKINELHTQAGKDAEALQEAVRKVTELEAALDKCRNQEPKIVKDTIDNTKK 260

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           ++    +   F +  +      +  +++I   L +       I+G+            N 
Sbjct: 261 TL---ESVITFRQGRTTVDNSQLPNVERIATYLKNHKGASVLIKGYASPE---GSVEVNE 314

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
           R++  RA +  ++L+ K G++E+RI    G  
Sbjct: 315 RIARQRAEAVKKMLVGKYGIAEERIVA-EGQG 345


>gi|302381418|ref|YP_003817241.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192046|gb|ADK99617.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 152

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 5/111 (4%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289
           +R    F+++        +  +      L       + + G   A      A  N  LS 
Sbjct: 43  KRFDVYFNENQDRLTSPALEAIGLTATQLQGCRITSVKVLGLASA---SGAADANLDLSE 99

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
            RA +  + L  +G         +             +    RR ++LVE 
Sbjct: 100 RRALAVAEALTAAGWPAPAFELAAA-GDSGATTPDGVLEPLRRRTEVLVEA 149


>gi|301165252|emb|CBW24823.1| putative outer membrane protein [Bacteroides fragilis 638R]
          Length = 387

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +E +     +++    A K  K LQ+  +K++   + L      +  + + T      
Sbjct: 216 DQQEVDVLNAKINELHTQAGKDAKALQEAVRKVTELEAALDKCRNQEPKIVKDTIDNTKK 275

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           ++    +   F +  +      +  +++I   L +       I+G+            N 
Sbjct: 276 TL---ESVITFRQGRTTVDNSQLPNVERIATYLKNHKGASVLIKGYASPE---GSVEVNE 329

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
           R++  RA +  ++L+ K G++E+RI    G  
Sbjct: 330 RIARQRAEAVKKMLVGKYGIAEERIVA-EGQG 360


>gi|324326202|gb|ADY21462.1| hypothetical protein YBT020_11090 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 331

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 55/171 (32%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L  FFLV+ I++          +         +  A   I +  +    ++  K+  +  
Sbjct: 73  LFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFGALSSISNPTSEKTTATSKKVASNTT 132

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
           E    +  +L+    ++K Q Q  E         +Q +  + +  +  ++ ++  +  D 
Sbjct: 133 EQKDSDKKELEKKEADEKAQKQEDEKRQAEEQARKQEDEKRQADEQARKQQEEQKRLADE 192

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
           +    +EE          K    +++   +   K+              + 
Sbjct: 193 QTRKQQEEQKRQADEQARKQQEEQKRLADEQTRKQQEEQKRQADEQARKQQ 243


>gi|153003288|ref|YP_001377613.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152026861|gb|ABS24629.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter sp.
           Fw109-5]
          Length = 385

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326
            I    DAS  R       +LS + A +A + L + GV+  R+   SG       + +  
Sbjct: 314 RIEAFVDASDDRAGDG---KLSEEMARTAGERLHQLGVARARL-AWSGRGGESPLLPNFT 369

Query: 327 MNSA--NRRIDI 336
                 NRRI++
Sbjct: 370 ARGRAANRRIEV 381


>gi|228920870|ref|ZP_04084209.1| Excalibur domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838801|gb|EEM84103.1| Excalibur domain protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 316

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 48/176 (27%), Gaps = 7/176 (3%)

Query: 44  LMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           L  FFLV+ I++         K+ I           +        E+     +     + 
Sbjct: 73  LFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALLGISAPSSEKTTATSTKVASNNE 132

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160
              +   K  ++ K      +KQ              +  +       R  E  K L   
Sbjct: 133 EQKDSEQKKELEKKAADEKTQKQEDEKRQAEEQARKQEDEKRQAEEQARKQEDEKRLADE 192

Query: 161 TDLEKSINK----EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
              ++   +    +E        +++    + +K+ ++  ++          +   
Sbjct: 193 QARKQQEEQKRLADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKR 248


>gi|229032156|ref|ZP_04188132.1| hypothetical protein bcere0028_41980 [Bacillus cereus AH1271]
 gi|228729162|gb|EEL80162.1| hypothetical protein bcere0028_41980 [Bacillus cereus AH1271]
          Length = 81

 Score = 46.1 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
            +T+L A F+V++ +++ D    K +   F           + + D++   E+       
Sbjct: 1   MLTLLFALFIVLFAMSSIDAAKFKQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSASSL 60

Query: 100 LSIDEHITK 108
            +      +
Sbjct: 61  EAEQAKKQE 69


>gi|298383525|ref|ZP_06993086.1| outer membrane protein [Bacteroides sp. 1_1_14]
 gi|298263129|gb|EFI05992.1| outer membrane protein [Bacteroides sp. 1_1_14]
          Length = 466

 Score = 46.1 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+ +++     + +  L ++  V       + + G  D+S        N  LS 
Sbjct: 363 SPVYFFFNLNTAHLTDASQMLNLDELARVAKKYGLSVKVTGAADSS--TGTPVLNGSLST 420

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
            RA      L K G+  +RI K+S  G A H    A+
Sbjct: 421 LRADHIVAELEKRGIPIERIVKVSRGGIADHVPVEAN 457


>gi|160886684|ref|ZP_02067687.1| hypothetical protein BACOVA_04696 [Bacteroides ovatus ATCC 8483]
 gi|254883551|ref|ZP_05256261.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|156107095|gb|EDO08840.1| hypothetical protein BACOVA_04696 [Bacteroides ovatus ATCC 8483]
 gi|254836344|gb|EET16653.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 466

 Score = 46.1 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+ +++     + +  L ++  V       + + G  D+S        N  LS 
Sbjct: 363 SPVYFFFNLNTAHLTDASQMLNLDELARVAKKYGLSVKVTGAADSS--TGTPVLNGSLST 420

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
            RA      L K G+  +RI K+S  G A H    A+
Sbjct: 421 LRADHIVAELEKRGIPIERIVKVSRGGIADHVPVEAN 457


>gi|304412857|ref|ZP_07394455.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|307306021|ref|ZP_07585766.1| OmpA/MotB domain protein [Shewanella baltica BA175]
 gi|304348774|gb|EFM13194.1| OmpA/MotB domain protein [Shewanella baltica OS183]
 gi|306910894|gb|EFN41321.1| OmpA/MotB domain protein [Shewanella baltica BA175]
          Length = 280

 Score = 46.1 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  + S+   +   +L ++ E L     E I + G  D+         N RL+  RA S
Sbjct: 176 LFMVNESVLTSDGRNMLVRMIEDLRGKPIESIVVYGIADS---SGAYASNRRLADARANS 232

Query: 295 AYQVLMKSGV 304
               L   G+
Sbjct: 233 VKYFLQTEGM 242


>gi|71907735|ref|YP_285322.1| OmpA/MotB [Dechloromonas aromatica RCB]
 gi|71847356|gb|AAZ46852.1| OmpA/MotB [Dechloromonas aromatica RCB]
          Length = 183

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
                 F   SS    +    +  +   L      V ++ GH +       +  N  +S 
Sbjct: 73  DDECVFFSLGSSTVSNKEKYKIDSLARRLLDDKSLVATLIGHAND---NGSSSFNLAVSD 129

Query: 290 DRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKI-ASDPMNSANRRIDILVEDRQ 342
            R  +  + L   GV   +I  ++ G +    K   S+     +RR++ +   ++
Sbjct: 130 SRVMAVAERLRNHGVQRSQIRKEVLG-SERTPKSCRSEECRLRSRRVEFVFTKQR 183


>gi|194288963|ref|YP_002004870.1| hypothetical protein RALTA_A0829 [Cupriavidus taiwanensis LMG
           19424]
 gi|193222798|emb|CAQ68801.1| conserved hypothetical protein; putative outer membrane protein,
           OmpA motif [Cupriavidus taiwanensis LMG 19424]
          Length = 252

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 55/182 (30%), Gaps = 6/182 (3%)

Query: 18  KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77
           +++   +        W I ++D MT LM  FLV   +       K  I            
Sbjct: 9   RRRGREEGEK---PFW-ISFSDLMTALMVLFLVALSVALLAVTKK--ISDDEREEKARAE 62

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
             S  + + +   E+    ++     +   +   + +  +T   +Q   + +    L   
Sbjct: 63  QISGLMTEVRKVAEQFPGVRVIDRTIDFGPRGRFEREGQNTLSAQQRALVRDFTPRLLEQ 122

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            ++        + +       ++     ++N         + +          RL D  +
Sbjct: 123 LRTTEAGRHWFKRAVVEGYASQTGKYLFNLNLSLERSSRVICELLREPPAGDTRLSDADR 182

Query: 198 KI 199
           ++
Sbjct: 183 QL 184


>gi|332828541|gb|EGK01241.1| hypothetical protein HMPREF9455_02433 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 632

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD +S +   E++  L+   +       + + + G+ D        + N  LS  RA   
Sbjct: 507 FDFNSYMLGVESLKALEAWQKESDFSKIDTLVMEGYADEI---GGEQYNQTLSEKRAVEV 563

Query: 296 YQVLMKSGVSEDRISKISG 314
              +  +G++   + +  G
Sbjct: 564 GNWMKDNGITAKLLMQGKG 582


>gi|83594714|ref|YP_428466.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
 gi|83577628|gb|ABC24179.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
          Length = 242

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F    +    +   +L +   VL       + + GHTD     + A     LS  RA + 
Sbjct: 140 FASDQADLDDDAGPLLAEAARVLKQDPRLSLMVMGHTDDRHALDEA---LDLSARRAEAV 196

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336
              L++  GV   R+    G        ++      + NRR+D+
Sbjct: 197 VAALVEDHGVERGRLVP-RGAGWLAPVASNRTQAGRALNRRVDL 239


>gi|153871184|ref|ZP_02000420.1| OmpA/MotB [Beggiatoa sp. PS]
 gi|152072349|gb|EDN69579.1| OmpA/MotB [Beggiatoa sp. PS]
          Length = 292

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 16/149 (10%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              K  K LQ     +  +     A +    V  E  R  ++ +I       + + +   
Sbjct: 127 ADSKTYKALQQRLANLPISEEAFAAIDTSNLVDAEHERNNLINTIETTNIYFLGESTKFS 186

Query: 244 PLPET--------IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
              ET        I  L    + L+  T+ + I G TD          N +LS  RA   
Sbjct: 187 IEQETALQSLLKNIQKLLVQSQTLSQPTD-LQIIGDTDGL---GSKSYNEKLSQQRAKVV 242

Query: 296 YQVLMKSGVSEDRISKISG----FAHHRL 320
           +  L + G+ +  +  +S     F   + 
Sbjct: 243 FNWLEQEGIEKTFLKIVSPENIRFGESKP 271


>gi|323445947|gb|EGB02315.1| hypothetical protein AURANDRAFT_68995 [Aureococcus anophagefferens]
          Length = 664

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 5/166 (3%)

Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              +++  +A  R   +    +++    + L  +               +I  +   +T 
Sbjct: 15  ASKAEDPAVADARAAAVAAKLEELGVDPARLRHEGHGAATAARREVQFTVIQELRVSDTV 74

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
            F   SS     +  VL  +  VLA     V+ + GH   SP          L+ DRA +
Sbjct: 75  QFAACSSDVTDGSAGVLDAVARVLAERPHLVVRVEGHCCTSPMWGSTTI-EELAADRAEA 133

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
               L   GV  D++ +  GF        ++     NRR +  V D
Sbjct: 134 VVAALAARGVPRDQL-RPRGFGADLPVDVAN--KRLNRRTEFHVVD 176


>gi|114327542|ref|YP_744699.1| hypothetical protein GbCGDNIH1_0878 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315716|gb|ABI61776.1| hypothetical protein GbCGDNIH1_0878 [Granulibacter bethesdensis
           CGDNIH1]
          Length = 132

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289
           +     F + S++  P    V+    E+        +++ G+   S  +        L+ 
Sbjct: 24  RSYNVYFLQDSAVLDPAATQVVSYAAELAKQYPGLKVTVSGYGGKSSDQASTVTETPLAK 83

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----RRIDI 336
            RA +    L+  G+++ RI +           +   ++++N     RR+DI
Sbjct: 84  LRANAVRDQLVSDGIAKSRIER-----------SVHTVDASNLAVAERRVDI 124


>gi|198276407|ref|ZP_03208938.1| hypothetical protein BACPLE_02602 [Bacteroides plebeius DSM 17135]
 gi|198270849|gb|EDY95119.1| hypothetical protein BACPLE_02602 [Bacteroides plebeius DSM 17135]
          Length = 496

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 12/193 (6%)

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
            +              S       +  +   +         P  +        R+  + D
Sbjct: 291 DDDDAIGRKGYPRNNYSGLNSLRARLKNKHWNGKSPLEGQAPNGNGRTDSLQHRQDSVFD 350

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQ 253
           L       L      +    +       G  I          F+   S +  P  +V L 
Sbjct: 351 LGTGQFKNLPDSTLADYAVLMQSGRECIGAPIFF-------FFELGTSHLTDPSQLVNLD 403

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI- 312
           ++  V       + + G  D+         N  LS  RA      L K G+S DR++K  
Sbjct: 404 ELARVAKKYGLKVKVTGAADS--ATGTVGINNALSASRADYIASELNKRGLSPDRMTKTG 461

Query: 313 -SGFAHHRLKIAS 324
             G + +    A+
Sbjct: 462 EGGISDYAPTEAN 474


>gi|91223832|ref|ZP_01259096.1| outer membrane protein [Vibrio alginolyticus 12G01]
 gi|91191324|gb|EAS77589.1| outer membrane protein [Vibrio alginolyticus 12G01]
          Length = 206

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F        P   + L ++  +L  +     +    D SP  ++   N  L+  R  +
Sbjct: 76  FFFAMDEHQVTPSHDMPLSELKALLQSNPN-AQVILIGDTSPEASLE-YNKALAKKRTAA 133

Query: 295 AYQVLMKSGVSEDRISKISGF 315
             ++L+++G+ ++RI +   +
Sbjct: 134 IRELLVRNGIQDNRIEEQEFY 154


>gi|295691377|ref|YP_003595070.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
 gi|295433280|gb|ADG12452.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
          Length = 154

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 5/102 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD+ S+   PE  +VL            E + + G  DA      +  N  LS  RA   
Sbjct: 49  FDQDSAALTPEARMVLANARTQAKGCRVESVRVIGLADAV---GASEANLALSKRRADVV 105

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
              L   G  +     ++       +  S       RR DI+
Sbjct: 106 SSALAAHGFGKADFD-LAAVGDAGARAPSGAAAPLRRRADIV 146


>gi|162449046|ref|YP_001611413.1| hypothetical protein sce0776 [Sorangium cellulosum 'So ce 56']
 gi|161159628|emb|CAN90933.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 286

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 16/192 (8%)

Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200
           E  + S  R  E  + L +     ++   +         + +       +R+  +  +++
Sbjct: 77  EEQRKSNQRAKELEQTLSQVRGELEAKTAQIEKGEAERQQTEAAKKSGVERVGQIKAELA 136

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             L   V   +   V     +  + +S      + +F  ++    P+   +L ++   L+
Sbjct: 137 GKLDKHVKKGVA-AVAVAEGQAFVALS-----ESAVFLPNTVDVSPQGQALLCQVSGALS 190

Query: 261 HSTEVIS------IRGHTDASPFRNIARDN--WRLSLDRAYSAYQVLMKS-GVSEDRISK 311
            S    +      + G   + P    A     W LS  RA +  Q L     V+  R+S 
Sbjct: 191 ASGGGQAPLRVGAVSGPPASVPAPLQAAYPTPWELSAVRAATVTQTLQDKCSVAGARLSA 250

Query: 312 ISGFAHHRLKIA 323
           + G+A H    A
Sbjct: 251 V-GYAEHDPAAA 261


>gi|326562208|gb|EGE12536.1| hypothetical protein E9G_01148 [Moraxella catarrhalis 7169]
 gi|326567162|gb|EGE17284.1| hypothetical protein E9Q_07464 [Moraxella catarrhalis BC1]
          Length = 204

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +  +  QD  ++I   L    AD++ K    +  +  + IS +      +F    S 
Sbjct: 14  QVRQIAEEYQDTQEQIYKALLHEFADDLPKW-GAKIDKDTLTISFLSPD--ILFKTGQSD 70

Query: 244 PLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDR 291
                  +L           +    S   I I GHT +     +  D     N RLS DR
Sbjct: 71  LQDNYKEILSDFFPRYIKVIDHYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDR 130

Query: 292 AYSAYQV 298
             +  Q 
Sbjct: 131 TRTVLQF 137


>gi|228471772|ref|ZP_04056545.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276925|gb|EEK15620.1| putative immunoreactive 43 kDa antigen PG32 [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 391

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 54/164 (32%), Gaps = 15/164 (9%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +         + +  +++NK+       L  +       +KR+  L K++    +     
Sbjct: 217 NGAHHFTRPSNREELEALNKQLAGLREDLRGKDGQLSDSQKRIAQLEKELQEARNKKPEV 276

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI- 268
                   + T   ++           +    +      +  +++I   L        + 
Sbjct: 277 IERTITKSKKTLESVVT----------YRVGRTNIESSQLPNVERIATYLKKYPNSKVVI 326

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
           +G+            N +L+ DRA S  ++L+ +  +S DRI  
Sbjct: 327 KGYASPE---GNLEKNQKLAADRAESVKKILVTRYKISSDRIQA 367


>gi|153836089|ref|ZP_01988756.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|308125498|ref|ZP_05775635.2| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|149750843|gb|EDM61588.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|308112028|gb|EFO49568.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
          Length = 256

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +        +  L  + + L +   E ++I G  D+       + N  LS  RA S
Sbjct: 152 LFPVNQYQLTNSGVKTLFDVLDKLKYLPVEELTIYGVADS---SGSYQKNRVLSDRRAQS 208

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 209 VKTFLVEEGLS 219


>gi|28901208|ref|NP_800863.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260880054|ref|ZP_05892409.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260895171|ref|ZP_05903667.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|28809721|dbj|BAC62696.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085575|gb|EFO35270.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308092236|gb|EFO41931.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
          Length = 268

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +        +  L  + + L +   E ++I G  D+       + N  LS  RA S
Sbjct: 164 LFPVNQYQLTNSGVKTLFDVLDKLKYLPVEELTIYGVADS---SGSYQKNRVLSDRRAQS 220

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 221 VKTFLVEEGLS 231


>gi|153871320|ref|ZP_02000522.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152072212|gb|EDN69476.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 219

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 44/172 (25%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           Q L K+    L   VA      +        I+  + D      +    +   P  + +L
Sbjct: 62  QALLKEFKPDLPLWVAKIEPTTLTIRFQEPTIIFQLGDDSLNTHYQFILTDFFPRYVRIL 121

Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQV--------- 298
           ++   V+   +    I GHT +    +        +N  LS  R  +  +          
Sbjct: 122 KQYAHVIEAVS----IEGHTSSEWRSSFSEDEAYFNNMALSQKRTRTVLEYCILLPTVKN 177

Query: 299 --------LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILV 338
                   L  +G+S  R+    GF               N    RR++  +
Sbjct: 178 DKEWLQQILTANGLSSSRLMIEDGF--------------ENIEHSRRVEFRI 215


>gi|315180950|gb|ADT87864.1| OmpA family protein [Vibrio furnissii NCTC 11218]
          Length = 337

 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 6/103 (5%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +S    P     L  I   L    +  I I G  D+       R N +L+L RA +A   
Sbjct: 234 NSYQLTPAVKAQLNTIIAALVTQPDHVIHITGGADSRMAY--RRYNHQLALRRAQAAQSY 291

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
           LM+ GV   +I   +           +  N A R++ I V   
Sbjct: 292 LMQHGVKPGQIVVAASL--TH-LAQGEADNPAARKVTIDVRRS 331


>gi|288802114|ref|ZP_06407555.1| hypothetical protein HMPREF0660_00560 [Prevotella melaninogenica
           D18]
 gi|288335549|gb|EFC73983.1| hypothetical protein HMPREF0660_00560 [Prevotella melaninogenica
           D18]
          Length = 449

 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 15/167 (8%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           N  +  L KE      R  R     +++    + L                 + I     
Sbjct: 296 NDRVNALQKEATENRARADREATERQRVEQKNADLQQRLSEYERSISEPSPAVQI----- 350

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
            +   F  +S+    + +  L+     +      I     T           N +LS  R
Sbjct: 351 AHYVQFANNSAGISRDELAHLKYFAAYMRGHQLSIIAEAST-----PGPTGYNQKLSERR 405

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
                +VL+K G +++ +                P  +  RR+ I +
Sbjct: 406 LKHVVKVLLKEGFAKEDLHPQIAIGEQ----DGKPDAAG-RRVTIKL 447


>gi|126659428|ref|ZP_01730562.1| OmpA/MotB [Cyanothece sp. CCY0110]
 gi|126619264|gb|EAZ89999.1| OmpA/MotB [Cyanothece sp. CCY0110]
          Length = 705

 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 237 FDKSSSIP-LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           FD++SS          L+ I + LA   +  + I GH+D +        N  L+  R   
Sbjct: 601 FDQNSSSIKTDNINEKLKTIEKFLAEHPQVHLIIIGHSDTT---GSVVQNEALAQARVNE 657

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANR--RIDILV 338
             +VL+K+ V   R++             ++ P+   +R  R +IL+
Sbjct: 658 VKRVLLKNKVDASRLTTAVSL-EPPPGVTSNQPLW-LSRCVRFEILI 702


>gi|298482994|ref|ZP_07001175.1| immunoreactive antigen PG32 [Bacteroides sp. D22]
 gi|298270738|gb|EFI12318.1| immunoreactive antigen PG32 [Bacteroides sp. D22]
          Length = 387

 Score = 45.3 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
             +E +     +++    A K  K LQ+  +K++   + L      +  + + T      
Sbjct: 216 DQQEVDVLNAKINELHTQAGKDAKALQEAVRKVTELEAALDKCRNQEPKIVKDTIDNTKK 275

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285
           ++    +   F +  +      +  +++I   L +       I+G+            N 
Sbjct: 276 TL---ESVITFRQGRTTVDNSQLPNVERIATYLKNHKGASVLIKGYASPE---GSVEVNE 329

Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
           R++  RA +  ++L+ K G++E+RI    G  
Sbjct: 330 RIARQRAEAVKKILVGKYGIAEERIVA-EGQG 360


>gi|237798774|ref|ZP_04587235.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021627|gb|EGI01684.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 240

 Score = 45.3 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 17/65 (26%), Gaps = 5/65 (7%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294
           F              L  +   L     V  +   GH+D          N  LS  RA +
Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRVELDGHSDN---SGNRLTNRDLSRRRALA 234

Query: 295 AYQVL 299
               L
Sbjct: 235 VMDYL 239


>gi|116327318|ref|YP_797038.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332067|ref|YP_801785.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116120062|gb|ABJ78105.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116125756|gb|ABJ77027.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 589

 Score = 45.3 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 37/138 (26%), Gaps = 18/138 (13%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           S          +L       + +SI +                    +   +  +L    
Sbjct: 465 SNGRGAEFKTEILVVEEDHSLRVSIPES-----------QVEARWWRLPGILRSILNEYP 513

Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
                ++ H+           N   + +RA  A++      V   RI +  G+      +
Sbjct: 514 GYNIELQSHSSHQ---GDEEVNQVQTEERARDAFEYFFSKKVPFGRI-RFRGYGETLPLV 569

Query: 323 ASDP--MNSANRRIDILV 338
                     N+RID  +
Sbjct: 570 PGSGKYEADKNQRIDFYL 587


>gi|307565572|ref|ZP_07628052.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
 gi|307345731|gb|EFN91088.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
          Length = 344

 Score = 45.3 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + +        +  S     +   F +       
Sbjct: 214 RDQTEIDALNAQINELRNRKPEVITKEVIKEVPANKDLSAS---NLSFVTFAQGKYTLTT 270

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
                L  I E        + I G    +     A+ N +LS +RA      L   GV  
Sbjct: 271 AAKTELNNIKE-----GSRVQIVG---TASPEGSAKFNKKLSENRANVVAHYLRSRGVI- 321

Query: 307 DRISKISGFA 316
             + K++G  
Sbjct: 322 --VEKVTGKG 329


>gi|282859600|ref|ZP_06268704.1| OmpA family protein [Prevotella bivia JCVIHMP010]
 gi|282587651|gb|EFB92852.1| OmpA family protein [Prevotella bivia JCVIHMP010]
          Length = 358

 Score = 45.3 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + V          +S         F +  SI   
Sbjct: 228 RDQAEIDALNAQINELRNRKPEVITKEIVKEVPAVKEFTVS---DLVFVTFAQGKSILTK 284

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E    L  I E +      + + G    +     A  N ++S +RA      L   GV  
Sbjct: 285 EAKAALGNIKEGV-----HVQVVG---TASPEGSAEINQKISQNRANVVADYLRGRGVI- 335

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 336 --VDEATGKG 343


>gi|332667555|ref|YP_004450343.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336369|gb|AEE53470.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 684

 Score = 45.3 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 16/91 (17%)

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI------SKISGF 315
               + + GHTD          N +LS++RA    +++ ++G+   R+       ++ G 
Sbjct: 600 QGGTVIVHGHTD---IIGDETYNQKLSMERANDVKRIM-ENGL--SRLGRNDVKFQVYGS 653

Query: 316 AHHR---LKIASDPMNS-ANRRIDILVEDRQ 342
                      + P     NR + I +  R 
Sbjct: 654 GEDESMSPFDNNYPEERFYNRTVIIDIVPRN 684


>gi|317480804|ref|ZP_07939888.1| OmpA family protein [Bacteroides sp. 4_1_36]
 gi|316903027|gb|EFV24897.1| OmpA family protein [Bacteroides sp. 4_1_36]
          Length = 377

 Score = 45.3 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 54/174 (31%), Gaps = 6/174 (3%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + +    +T                      +   +  L++            +      
Sbjct: 182 ANNAAVEITAGIVYHFKNSNGKHYFTMTKPYDQAEIDGLNRSINELRMEVDSKKQDLNSA 241

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+ L +  + +    E     ++ +     +   F +  S      +  +++I   L
Sbjct: 242 NQKLAQL-SQMLEECQKREPQVQTVVETAKTLESVVTFRQGKSSIDASQLPNVERIATYL 300

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
              +   + ++G+            N R++  RA +   +L+K   +S DRI+ 
Sbjct: 301 NKHSNAKVVVKGYASPE---GSIEVNERIAQARANAVMNLLVKKYRISADRITA 351


>gi|152992430|ref|YP_001358151.1| hypothetical protein SUN_0836 [Sulfurovum sp. NBC37-1]
 gi|151424291|dbj|BAF71794.1| hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 624

 Score = 45.3 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 31/207 (14%)

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           + D    K   K  +      K  N       +   ++ K K+  + L   +   +   +
Sbjct: 411 SADKSIVKLTEKLKEQVLQNKKIINELTAKSDRLLKMSKKEKQISRLL--NLKKNIDKHL 468

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG----------E 257
           A      + +   +  ++ S         F K S         +L++             
Sbjct: 469 AAAFADSIYYNPKKNVLVFS-----GPQFFPKGSVALQGNAKKILEETSIKYFSVLLSIP 523

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA------YQVLMKSGVSEDRISK 311
                 + IS+  +TD+       + N +LS  RA          Q L   G+   +  K
Sbjct: 524 EAKKYIDRISVSAYTDSD---GTLQYNTQLSFKRAQVVTESLASLQYLKGKGLL--KYLK 578

Query: 312 ISGFAHHRLKIASDPMNSAN--RRIDI 336
             G+A   + + +   +  N  RR++I
Sbjct: 579 FKGYAGRDVIMVNGIED-KNASRRVEI 604


>gi|59714403|ref|YP_207177.1| outer membrane protein [Vibrio fischeri ES114]
 gi|59482680|gb|AAW88289.1| outer membrane protein [Vibrio fischeri ES114]
          Length = 182

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS--SSIP 244
           +  +      + I++    + A N     L E      +IS+  +     +  +      
Sbjct: 29  REAQINDIQQETINAQSKQIAALNYKVQQLVENNFPSPMISVTPRLYQVYYPYNVSKLTV 88

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
            PE    + K     A     I++ G TD     +  +   ++++ RA       + +G+
Sbjct: 89  TPELRYSILKD----AKQATRINLLGRTDGVRPTDSDK---KVAMARAMFLRDYFVHNGI 141

Query: 305 SEDRISKISGFAHHRLKIASDPMN-SA--NRRIDILVEDRQ 342
               +  ++ +A       ++        NRR++I +  R+
Sbjct: 142 DPT-LIYVN-YASATDYADNNWSRIGRKNNRRVEIEIYPRE 180


>gi|332882793|ref|ZP_08450404.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679295|gb|EGJ52281.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 415

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 13/132 (9%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           K  L       ++       +  ++       +  ++ S+       +F+  SS+   E 
Sbjct: 274 KSSLNGCETLTNAANFKTEWEKNLENAKINEAKQIVIPSVG-----VLFELGSSVVSEEG 328

Query: 249 IVVLQ-KIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
             ++Q      L  + EV   I  +T          +N  LS DRA     VL   GV+ 
Sbjct: 329 RKLIQEFASAYLQTNKEVTVLIESYTCDI---GTDENNMTLSNDRANVIKAVLENMGVTS 385

Query: 307 DRISKISGFAHH 318
               ++  +   
Sbjct: 386 ---VEVKSYGES 394


>gi|172039620|ref|YP_001806121.1| hypothetical protein cce_4707 [Cyanothece sp. ATCC 51142]
 gi|171701074|gb|ACB54055.1| hypothetical protein cce_4707 [Cyanothece sp. ATCC 51142]
          Length = 583

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269
            I + +    T+  +   I   +N+  F   +     +TI         +      + I 
Sbjct: 459 GIEQVISTFQTQPYLETRIYFDQNSSQFQTDNINQKVKTIEKFLAEHPRI-----HLIII 513

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           GH+D +        N  L+  RA +  +VL+++ V   R+
Sbjct: 514 GHSDTT---GSVAQNESLAKARAKAVERVLLQNKVDSRRL 550


>gi|281424046|ref|ZP_06254959.1| putative immunoreactive antigen PG32 [Prevotella oris F0302]
 gi|281401829|gb|EFB32660.1| putative immunoreactive antigen PG32 [Prevotella oris F0302]
          Length = 356

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 16/132 (12%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                  L      + S L+    + I + V        ++  +        F +  S  
Sbjct: 226 DQNEIDALNSQISDLRSELAKKPKEIIKEVVKEVPGAATVVNPLF-----VTFAQGKSTL 280

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             E   VL  + +        + I G    S     +  N RLS +RA      L   GV
Sbjct: 281 TSEAKSVLDNVAK-----GSTVQIVG---TSSPEGSSSLNKRLSQNRANVVANYLKNKGV 332

Query: 305 SEDRISKISGFA 316
           +   + K  G  
Sbjct: 333 N---VEKADGKG 341


>gi|229109630|ref|ZP_04239218.1| Excalibur domain protein [Bacillus cereus Rock1-15]
 gi|228673816|gb|EEL29072.1| Excalibur domain protein [Bacillus cereus Rock1-15]
          Length = 289

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 5/161 (3%)

Query: 40  FMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           F T+   L  FFLV+ I++          +         +  A  GI D  +  E+++  
Sbjct: 68  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALSGISDPSS--EKTTAT 125

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
              ++ +    K+S   K     +  +  + + +   L+  Q  +        D +  K 
Sbjct: 126 STKVASNNEEQKDSEKKKDLEKKEADEKTQKQEDEKRLAEEQARKQEDEKRQADEQARKQ 185

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +         +++       + E+    + +++ Q   +
Sbjct: 186 QEEQKRQAGEQARKQQEEQKRQADEQARKQQEEQKRQADEQ 226


>gi|170739040|ref|YP_001767695.1| hypothetical protein M446_0701 [Methylobacterium sp. 4-46]
 gi|168193314|gb|ACA15261.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 630

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322
            A  +  L+  RA +    L+K+GV  DR++ ++G A  R   
Sbjct: 583 PAEPDLTLAQRRAAAIVDYLLKAGVPADRVATVTGEAAQRAVA 625


>gi|42781280|ref|NP_978527.1| hypothetical protein BCE_2215 [Bacillus cereus ATCC 10987]
 gi|42737202|gb|AAS41135.1| hypothetical protein BCE_2215 [Bacillus cereus ATCC 10987]
          Length = 332

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 57/203 (28%), Gaps = 10/203 (4%)

Query: 40  FMTV---LMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           F T+   L  FFLV+ I++         K+ I           +++      E+      
Sbjct: 66  FATLSFILFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFGALSSISNPTSEKTAATSK 125

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                +    E   K  ++ K      +KQ              +  +       R  E 
Sbjct: 126 KVTSNNAEEKESEKKKELEKKEADEKTQKQEDEKRQAEEQTRKQEDEKRQAEEQARKQED 185

Query: 154 GKDLCKSTDLEKSINK----EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            K L      ++   +    +E        +++    + +K+ ++  ++          +
Sbjct: 186 EKRLADEQARKQQEEQKRLADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEE 245

Query: 210 NIVKGVLFETTRTGILISIIDQR 232
              +       +        D++
Sbjct: 246 QKRQADEQARKQQEEQKRQADEQ 268


>gi|56475701|ref|YP_157290.1| hypothetical protein ebA521 [Aromatoleum aromaticum EbN1]
 gi|56311744|emb|CAI06389.1| hypothetical protein ebA521 [Aromatoleum aromaticum EbN1]
          Length = 161

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 15/134 (11%)

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI- 268
           +    +         +  + +      F    +         L  +   L  + E  ++ 
Sbjct: 39  DAEPALATTAGGFVEVAEVGEPLVKFYFGVGETALPANASADLATVIAALEAAPEKKALL 98

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---D 325
            G  D +     A  N  ++ +R  S  + L+ +GV  +R+         R  + S   D
Sbjct: 99  SGFHDET---GGAAVNAEVAKNRGLSVREALLAAGVPAERVLL------RRPAVTSGGGD 149

Query: 326 PMNSANRRIDILVE 339
              +  RR+++ V+
Sbjct: 150 AAEA--RRVEVRVQ 161


>gi|239817549|ref|YP_002946459.1| hypothetical protein Vapar_4587 [Variovorax paradoxus S110]
 gi|239804126|gb|ACS21193.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 234

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 10/69 (14%)

Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWII------NATDDDTKKAIEQY 68
          I++K+    +        W I ++D M+ LM  FLV+  +       + D  T+  IE+ 
Sbjct: 5  IVLKRGGKHEGE---SPFW-ISFSDLMSALMVLFLVVMAVTLVAVTQSIDSATRATIERS 60

Query: 69 FNPFGKNLM 77
                  M
Sbjct: 61 AAINKVMAM 69



 Score = 40.3 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 32/166 (19%)

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
           + +  I+  ++ +  D    GV  +     I +          FD             L+
Sbjct: 58  ERSAAINKVMAMIANDPKSTGVGVDQQNYRINL-----GKEVRFDSGRFTISVPAAQFLR 112

Query: 254 KIGEVL---------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKS 302
               VL               + + G TD          N +LSLDR+ S    L    +
Sbjct: 113 SYIPVLLTAKDTPEGMRWMRSVVVEGFTDED---GTYLYNLQLSLDRSRSVVCSLFQSAA 169

Query: 303 G---VSEDRISKIS------GFAHHRLKIASDPMNSANRRIDILVE 339
           G   +S +++ K+       G+            +   RR++  V+
Sbjct: 170 GNDSLSAEQLRKVQELFLVGGY-SFNSIKKDKSES---RRVEFKVD 211


>gi|162454093|ref|YP_001616460.1| hypothetical protein sce5817 [Sorangium cellulosum 'So ce 56']
 gi|161164675|emb|CAN95980.1| hypothetical protein sce5817 [Sorangium cellulosum 'So ce 56']
          Length = 592

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 52/201 (25%), Gaps = 7/201 (3%)

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
           +    L                              +++       L       + +   
Sbjct: 357 DPRAVLERGGPVHQEVVLRFEPFYSLHPQIVERRAARALAPPPGVTLALRGGAVVASGVA 416

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            +R  + A+  ++ L G+   +  +    E+       +   +     F + ++    E 
Sbjct: 417 PQRWIERARWSAAVLPGVSGFDGERLTAQESIDRARAAARSLEAMELFFRRGAARLSGEQ 476

Query: 249 IVVLQKIG---EVLAHSTEVISIRGHTDASPFR---NIARDNWRLSLDRAYSAYQVLMKS 302
              L ++    E L        +        +         N  LS  RA      L+  
Sbjct: 477 AARLDEVAAAAERLIARAREAHMTAEIRDIGYADPVGSEASNRALSQARAEHVAAELVAR 536

Query: 303 GVSEDRISKISGFAHHRLKIA 323
           G+  D + + SG    R  + 
Sbjct: 537 GIPAD-LLRASGGGTRREVVP 556


>gi|315224598|ref|ZP_07866424.1| probable immunoreactive antigen PG32 [Capnocytophaga ochracea
           F0287]
 gi|314945464|gb|EFS97487.1| probable immunoreactive antigen PG32 [Capnocytophaga ochracea
           F0287]
          Length = 387

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 8/163 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               +    +     +   +       L + +     + K L D  ++++     L A  
Sbjct: 207 GVVYRFKGSNGAHHFTTATQNPDNSAELGRLRDELNSKNKELSDCQRQVNKLQDDLEAAR 266

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             K  + E   T    ++    +   F  + S      +  +++I   L       +SI+
Sbjct: 267 NKKPEVVEKVVTKNKKTL---ESVVTFRVAKSTIDASQLPNVERIASYLNKYRNAKVSIK 323

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           G+            N +L+  RA +   +L+K   +S DRI  
Sbjct: 324 GYASPE---GNLEKNKQLATARAEAVKNLLVKRYKISADRIQA 363


>gi|2642367|gb|AAB86977.1| peptidoglycan associated lipoprotein [Allochromatium vinosum DSM
           180]
          Length = 62

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 4/55 (7%)

Query: 252 LQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
           L      L     V   I GH D          N  L   RA +  + L  SG+ 
Sbjct: 8   LDAHASYLRERPSVKVLIEGHADER---GTPEYNIALGERRAKAVAKYLHTSGLP 59


>gi|256819163|ref|YP_003140442.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
           7271]
 gi|256580746|gb|ACU91881.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
          Length = 387

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 8/163 (4%)

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
               +    +     +   +       L + +     + K L D  ++++     L A  
Sbjct: 207 GVVYRFKGSNGAHHFTTATQNPDNSAELGRLRDELNSKNKELSDCQRQVNKLQDDLEAAR 266

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
             K  + E   T    ++    +   F  + S      +  +++I   L       +SI+
Sbjct: 267 NKKPEVVEKVVTKNKKTL---ESVVTFRVAKSTIDASQLPNVERIASYLNKYRNAKVSIK 323

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
           G+            N +L+  RA +   +L+K   +S DRI  
Sbjct: 324 GYASPE---GNLEKNKQLATARAEAVKNLLVKRYKISADRIQA 363


>gi|299141629|ref|ZP_07034765.1| outer membrane protein [Prevotella oris C735]
 gi|298576965|gb|EFI48835.1| outer membrane protein [Prevotella oris C735]
          Length = 411

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAH 261
           L  L      K     +      I+  D      F ++++     + +V +Q+I   +  
Sbjct: 278 LKSLQERLANKNTESISGNGDENIAQFDAPILFFFKRNTTELVDKQQLVNIQEIAAAVKE 337

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
               + I G  D+       + N +LS+ R     ++L+ +GV + +++
Sbjct: 338 YNLEVRIVGSADSK--TGTPKHNRKLSIKRCRYVAKLLINAGVPKSKMT 384


>gi|260771348|ref|ZP_05880274.1| hypothetical protein VFA_004412 [Vibrio furnissii CIP 102972]
 gi|260613664|gb|EEX38857.1| hypothetical protein VFA_004412 [Vibrio furnissii CIP 102972]
          Length = 337

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +S    P     L  I   L    +  I I G  D+       R N +L+L RA +A   
Sbjct: 234 NSYQLTPAVKAQLNTIIAALVMQPDYVIHITGGADSRMAY--RRYNHQLALRRAQAAQTY 291

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           LM+ GV   +I   +           +  N A R++ I V  
Sbjct: 292 LMQHGVKPAQIVVAASL--TH-LAQGEADNPAARKVTIDVRR 330


>gi|315607555|ref|ZP_07882550.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250738|gb|EFU30732.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 403

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAH 261
           L  L      K     +      I+  D      F ++++     + +V +Q+I   +  
Sbjct: 270 LKSLQERLANKNTESVSGNGDENIAQFDAPILFFFKRNTTELVDKQQLVNIQEIAAAVKE 329

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
               + I G  D+       + N +LS+ R     ++L+ +GV + +++
Sbjct: 330 YNLEVRIVGSADSK--TGTPKHNRKLSIKRCRYVAKLLINAGVPKSKMT 376


>gi|193216227|ref|YP_001997426.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089704|gb|ACF14979.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 360

 Score = 44.6 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 29/129 (22%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNIARDNWRLS 288
           +  +F    +          QK  + L          I I GH D    R     N+ L 
Sbjct: 208 SNILFAYDRANIDASAQAQFQKNQDSLKTLLDDPDINIVIEGHCD---VRGDNSYNYELG 264

Query: 289 LDRAYSAYQVLMKS--GVSEDRISKISGFAH----HRLKIA-----SDPMNS--AN---- 331
             RA +A+  L++      E R  K+  F      ++ ++      +D       N    
Sbjct: 265 AKRANNAWLQLVERFNLSDEYRRFKVVSFGKAKANYKPRVPEPYPTNDSQYQPDRNVTFV 324

Query: 332 -----RRID 335
                RR+D
Sbjct: 325 PLKKGRRVD 333


>gi|302381837|ref|YP_003817660.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192465|gb|ADL00037.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 148

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 7/108 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        P     L+      L      + + G  DA      A  N  LS  RA   
Sbjct: 44  FADQQDALSPAADTALRFDVASALTCRIVSVRVVGLADA--LTGTAESNQALSQRRADRV 101

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR--IDILVEDR 341
              + + GV    +            +         RR  I+  + D 
Sbjct: 102 AARITELGVPAG-LITTEALGQED-AMTGSIERPLRRRTHIEFSLSDP 147


>gi|265751268|ref|ZP_06087331.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
 gi|263238164|gb|EEZ23614.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
          Length = 377

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 53/174 (30%), Gaps = 6/174 (3%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + +    +T                      +   +  L++            +      
Sbjct: 182 ANNAAVEITAGIVYHFKNSNGKHYFTMTKPYDQAEIDGLNRSINELRMEVDSKKQDLNSA 241

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  L+ L    + +    E     ++ +     +   F +  S      +  +++I   L
Sbjct: 242 NQKLARL-NQMLEECQKREPQVQTVVETAKTLESVVTFRQGKSSIDASQLPNVERIATYL 300

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311
              +   + ++G+            N R++  RA +   +L+K   +S DRI+ 
Sbjct: 301 NKHSNAKVVVKGYASPE---GSIEVNERIAQARANAVMNLLVKKYRISADRITA 351


>gi|218897150|ref|YP_002445561.1| hypothetical protein BCG9842_B3160 [Bacillus cereus G9842]
 gi|218544373|gb|ACK96767.1| conserved domain protein [Bacillus cereus G9842]
          Length = 330

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 55/203 (27%), Gaps = 7/203 (3%)

Query: 37  YADFMTVLMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           +A    +L  FFLV+ I++         K+ I           +        E+     +
Sbjct: 66  FAILSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALLGISAPSSEKTTATST 125

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                +    +   K  ++ K      +KQ              +  +       R  E 
Sbjct: 126 KVASNNEEQKDSEKKKELEKKEADEKTQKQEDEKRQAEEQARKQEDEKRQAEEQARKQED 185

Query: 154 GKDLCKS----TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            + L          E+    +E        +++    + +K+ ++  ++          +
Sbjct: 186 EERLADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEE 245

Query: 210 NIVKGVLFETTRTGILISIIDQR 232
              +       +        D++
Sbjct: 246 QKRQADEQARKQQEEQKRQADEQ 268


>gi|260879443|ref|ZP_05891798.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
           AN-5034]
 gi|308093505|gb|EFO43200.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
           AN-5034]
          Length = 292

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342
           DRI ++ G+   R    +        NRR+ I +   Q
Sbjct: 255 DRI-QVQGYGKRRPIADNGTPIGKDKNRRVVISLGRTQ 291


>gi|213023658|ref|ZP_03338105.1| outer membrane protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 67

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 12/56 (21%)

Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDILVED 340
              L+  G+  D+IS   G         +      P  +       +RR++I V+ 
Sbjct: 3   VDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKG 57


>gi|312881216|ref|ZP_07741014.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309371108|gb|EFP98562.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 343

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 10/113 (8%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           Q  T  F+  +S     +   L+     +  S   ISI   TD          N +LS  
Sbjct: 235 QEITIYFEFDNSKLSSVSEKKLKAFVSTVLPSQ-QISIFASTDTL---GSKIYNDKLSFK 290

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR-IDILVEDRQ 342
           RA S   +L++SG+ + +I  I+          S     A RR   +++ +++
Sbjct: 291 RAMSVRTILLESGLDKSQIEIIA-LGESH----SASAKPATRRFTKVIIHEKE 338


>gi|295093126|emb|CBK82217.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Coprococcus sp. ART55/1]
          Length = 88

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 17/60 (28%), Gaps = 5/60 (8%)

Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSEDRISKISGFAH 317
                 I I GHTD          N  LS  R +S  +      +G+       +     
Sbjct: 21  REYVSEIIIEGHTDT---NGSYIYNLELSQQRTFSVAKYCLTESNGIISSGHGSVETRGD 77


>gi|258542353|ref|YP_003187786.1| hypothetical protein APA01_12600 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633431|dbj|BAH99406.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636490|dbj|BAI02459.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639543|dbj|BAI05505.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642599|dbj|BAI08554.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645654|dbj|BAI11602.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648707|dbj|BAI14648.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651760|dbj|BAI17694.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654751|dbj|BAI20678.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 125

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 13/111 (11%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289
           ++    F   S+        VL ++ E        I  + G+  A    +       L++
Sbjct: 22  RKYVVFFSAGSTELDDNARNVLLQVAEKSKRHPSRIVKVEGYAHAGQDLSADAL---LAI 78

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338
            RA +  Q L + GV+ D I +         +  S        +RR++I +
Sbjct: 79  QRAKAVAQQLSEDGVAGDHIVQT-------PRAPSSSEGMQVGSRRVEIEL 122


>gi|330993557|ref|ZP_08317492.1| hypothetical protein SXCC_03456 [Gluconacetobacter sp. SXCC-1]
 gi|329759587|gb|EGG76096.1| hypothetical protein SXCC_03456 [Gluconacetobacter sp. SXCC-1]
          Length = 124

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 12/106 (11%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F ++S+        V+ +  +    S   + + G+  AS   +       L++DRA  
Sbjct: 26  VFFTENSTQLDTPAQTVITQAAQRAVASHANVRVEGYAAASHDLSADEL---LAIDRAKV 82

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
             + L+  GV   RI +       + +    ++    A+RR++I V
Sbjct: 83  VARQLVVDGVDTSRIRQ-------QPRGPMNNESGALASRRVEIEV 121


>gi|326560563|gb|EGE10944.1| hypothetical protein E9K_09484 [Moraxella catarrhalis 103P14B1]
 gi|326561436|gb|EGE11786.1| hypothetical protein E9M_06283 [Moraxella catarrhalis 46P47B1]
 gi|326565609|gb|EGE15772.1| hypothetical protein E9O_03254 [Moraxella catarrhalis 12P80B1]
 gi|326568444|gb|EGE18524.1| hypothetical protein E9S_08729 [Moraxella catarrhalis BC7]
 gi|326572334|gb|EGE22329.1| hypothetical protein E9U_01141 [Moraxella catarrhalis BC8]
 gi|326573946|gb|EGE23896.1| hypothetical protein EA1_07870 [Moraxella catarrhalis O35E]
 gi|326574936|gb|EGE24866.1| hypothetical protein E9Y_04486 [Moraxella catarrhalis 101P30B1]
 gi|326576264|gb|EGE26179.1| hypothetical protein E9W_01405 [Moraxella catarrhalis CO72]
          Length = 204

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +  +  QD  ++I   L    AD++ K    +  +  + IS +      +F    S 
Sbjct: 14  QVRQIAEEYQDTQEQIYKALLHEFADDLPKW-GAKIDKDTLTISFLSPD--ILFKTGQSD 70

Query: 244 PLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDR 291
                  +L           +    S   I I GHT +     +  D     N RLS DR
Sbjct: 71  LQDNYKEILSDFFPRYIKVIDRYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDR 130

Query: 292 AYSAYQV 298
             +  Q 
Sbjct: 131 TRTVLQF 137


>gi|332142770|ref|YP_004428508.1| OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype']
 gi|332142807|ref|YP_004428545.1| OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552792|gb|AEA99510.1| OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552829|gb|AEA99547.1| OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype']
          Length = 587

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 13/96 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---------VISIRGHTDASPFRNIA 281
              T +F  +  +     +  L+ +   +               I + G +D       +
Sbjct: 474 SSQTVLFATNQQVLSEVQLAKLESLANEIKQLLSLANKTNTVVSIMVMGASDN---SGSS 530

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             N  LS  RA +    L+  GV  D +  +S    
Sbjct: 531 ARNRELSQKRAENVVNSLISLGVESDILIPVS-LGE 565


>gi|162147532|ref|YP_001601993.1| hypothetical protein GDI_1748 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209545637|ref|YP_002277866.1| hypothetical protein Gdia_3528 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786109|emb|CAP55691.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533314|gb|ACI53251.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 124

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 227 SIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           S   ++    F + S     P   VV     +       VI++ G+  A    +      
Sbjct: 18  SQPSRKYVVFFTRDSVKLEDPALWVVTHAAQQAARDPQSVITVEGYAAAHGDLSADAL-- 75

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-NRRIDILV 338
            L++DRA      L+  GV+  RI +         +  S+   +  +RR++I +
Sbjct: 76  -LAVDRAKKVASQLVADGVAAGRIRQ-------MPRAPSNEDGAVGSRRVEIEI 121


>gi|121582849|ref|YP_973291.1| hypothetical protein Pnap_4266 [Polaromonas naphthalenivorans
          CJ2]
 gi|120596111|gb|ABM39549.1| conserved hypothetical protein [Polaromonas naphthalenivorans
          CJ2]
          Length = 235

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
          +             W I +AD MT LM  FLV+  + 
Sbjct: 7  RTRRGSQGEAEKPFW-ISFADLMTALMVLFLVVMAVA 42


>gi|298372719|ref|ZP_06982709.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275623|gb|EFI17174.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 660

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 20/79 (25%)

Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFA--------H 317
            I+ + D         DN +L+  RA     +L+ K GV E RI    GF          
Sbjct: 582 QIKAYADEQGDD-KGFDNQKLTDVRAQETKDILVNKYGVDEKRIVLCKGFGSVKGAPSID 640

Query: 318 HRLKIASDPMNSANRRIDI 336
           ++           NRR DI
Sbjct: 641 YQP----------NRRTDI 649


>gi|300727293|ref|ZP_07060707.1| putative outer membrane protein [Prevotella bryantii B14]
 gi|299775337|gb|EFI71933.1| putative outer membrane protein [Prevotella bryantii B14]
          Length = 501

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 11/138 (7%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSSSIPL-PET 248
               +S        +       +  +   L+S+ D            F   +     P  
Sbjct: 357 ENTQNSMKKSGYNQDERTENAIDGYKHDCLVSMNDSNGCIGAPVYFFFKIGTDELTEPSQ 416

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
           ++ ++ I  +       + I G  D+         N  LS  RA    +++++ GV    
Sbjct: 417 LLNIEGIAGIAVKYGLKMKISGAADS--ATGTEAINCELSTKRAEFIKRLMIERGVDSRN 474

Query: 309 IS--KISGFAHHRLKIAS 324
           I+   I G        A+
Sbjct: 475 ITIHPIGGIDSFSPVTAN 492


>gi|156977422|ref|YP_001448328.1| hypothetical protein VIBHAR_06209 [Vibrio harveyi ATCC BAA-1116]
 gi|156529016|gb|ABU74101.1| hypothetical protein VIBHAR_06209 [Vibrio harveyi ATCC BAA-1116]
          Length = 1585

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 24/218 (11%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
              N      + G    ++ +                   K  A +    +  L +    
Sbjct: 554 SGTNQALPVIQLGLSAMETKEQYDKHIDALEDADQAHGSLKAYAQQYLSAIAYLRRSDEK 613

Query: 202 TL----SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
                 +  V   +       T   G+++ I  + N+  F+            + +K+  
Sbjct: 614 ERWETKATEVQGFLGNEAKIYTDAMGVVVRINFKFNSAEFENEVKALNSNYEELCKKLRN 673

Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI------- 309
           +L  + +    + GH       +    N  +S  R  +    ++     ++RI       
Sbjct: 674 LLVENPDYQIALIGH---GGPISSQEKNLIVSQRRIDTIKDRILNGTQGDERIKLERRLV 730

Query: 310 SKISGFAHHRLK--------IASDPMN-SANRRIDILV 338
           ++  G A    K          SD  + + NRR+++ +
Sbjct: 731 TQAKGKAELLPKEGGYHDHGDRSDTADIAINRRVEVRL 768


>gi|118591130|ref|ZP_01548529.1| hypothetical protein SIAM614_15927 [Stappia aggregata IAM 12614]
 gi|118436206|gb|EAV42848.1| hypothetical protein SIAM614_15927 [Stappia aggregata IAM 12614]
          Length = 316

 Score = 44.6 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           FD S +    E    L++    L      ISI G +        A  N  LS+ RA +  
Sbjct: 22  FDVSQANLKEEHKNWLRRNVVPLLKGNGSISIVGLSSR---SGKAAFNKALSMKRANAVK 78

Query: 297 QVLMKSGVSEDRISKISGFAHH 318
             L +  +S      + G    
Sbjct: 79  SFLEECLLSCFPFDLVDGLGES 100


>gi|166368741|ref|YP_001661014.1| McnE protein [Microcystis aeruginosa NIES-843]
 gi|166091114|dbj|BAG05822.1| McnE protein [Microcystis aeruginosa NIES-843]
          Length = 1418

 Score = 44.6 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 90/329 (27%), Gaps = 45/329 (13%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           FMT+L AFF+++   +         +              S  I         +   + D
Sbjct: 322 FMTLLAAFFVLISRYS----GQLDVLVGS-----PIANRNSSAIEKLMGFFANTLALRGD 372

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
           +S +    +    +K  + +           +      +   +   S     +    L  
Sbjct: 373 MSGNPSFLELLQRVKQTTLSAYAHQDLPFEMLV----EKLQLNRDLSHNPLIQVMFSLQN 428

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           +   E S++  +   LP LS E       +    +++ ++ +             +    
Sbjct: 429 TPQSEASLSGLKMESLP-LSVELKARFDLEVNFWEVSDRLEAVWCYSTDLFAAPTINQMW 487

Query: 220 TRTG-ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
                +L +I    N  +F   S +   E   +L    E          I    +    R
Sbjct: 488 QHFQNLLTAIAANPNMGIFQL-SMLSDEERYQLLSLWNETHTDYPSDQCIHQLFEEQVKR 546

Query: 279 NIAR-----DNWRLSLD----RAYSAYQVLMKSGVSEDRIS---------KISGF----- 315
                       +L+ +    RA      L K GV  D +           I G      
Sbjct: 547 TPDAVAVVCSEQQLTYNELNCRANQLAHYLQKLGVKPDELVGICLERSLDMIVGLLAILK 606

Query: 316 --AHHRLKIASDPMNSANRRIDILVEDRQ 342
               +       P      RI  +++D Q
Sbjct: 607 VGGAYVPIDPDYPQE----RISFMLQDTQ 631


>gi|24213001|ref|NP_710482.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24193684|gb|AAN47500.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 589

 Score = 44.6 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 37/137 (27%), Gaps = 16/137 (11%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           S          +L       + ISI + +                   L      L +  
Sbjct: 465 SNGKGAEFKTTILVLEEDHSLRISIPESQVEA------------RWWSLPGKIRSLLNEF 512

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I   + +S  +     N   + +RA  A +      V   RI +  G+      I 
Sbjct: 513 PGYKIELQSHSSH-QGDEEVNQVGTEERAREALEYFFSKTVPFGRI-RFRGYGETLPLIP 570

Query: 324 SDP--MNSANRRIDILV 338
                    N+RID  +
Sbjct: 571 GSGKYEADKNQRIDFYL 587


>gi|148973906|ref|ZP_01811439.1| outer membrane protein [Vibrionales bacterium SWAT-3]
 gi|145965603|gb|EDK30851.1| outer membrane protein [Vibrionales bacterium SWAT-3]
          Length = 212

 Score = 44.6 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD       PE   VL ++  +L    +  +++ G T +         N  L+  R    
Sbjct: 78  FDFDKYDLKPEHTAVLNELVRLLGEQPDASVTLVGDTSSE---GTNTYNKALAKKRTGVI 134

Query: 296 YQVLMKSGVSEDRISK 311
              L+  G+   RI +
Sbjct: 135 RDALIDRGIDSKRIFE 150


>gi|299142913|ref|ZP_07036040.1| major outer membrane protein OmpA [Prevotella oris C735]
 gi|298575642|gb|EFI47521.1| major outer membrane protein OmpA [Prevotella oris C735]
          Length = 356

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 39/132 (29%), Gaps = 16/132 (12%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                  L      + + L+    + I + V        ++  +        F +  S  
Sbjct: 226 DQNEIDALNSQISDLRNELAKKPKEVIKEVVKEVPGAATVVNPLF-----VTFAQGKSTL 280

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             E   VL  + +        + I G    S     +  N RLS +RA      L   GV
Sbjct: 281 TSEAKSVLDNVAK-----GSTVQIVG---TSSPEGSSSLNKRLSQNRANVVANYLKNKGV 332

Query: 305 SEDRISKISGFA 316
           +   + K  G  
Sbjct: 333 N---VEKADGKG 341


>gi|255014613|ref|ZP_05286739.1| putative outer membrane protein [Bacteroides sp. 2_1_7]
          Length = 482

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +S   + E+ +  L  I E+       ++I G  D+         N  L   RA
Sbjct: 382 YFFFQLNSDRLVDESQIVNLDDIAEISKAHNLRVTISGAADS--ATGTQSINQELGQRRA 439

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
               Q L+  GV E  +  +  F       A+D   
Sbjct: 440 RYVAQKLIDRGVPEG-LIHLHSFGGIDKFKANDSNR 474


>gi|270340016|ref|ZP_06006744.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333007|gb|EFA43793.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 371

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 38/136 (27%), Gaps = 11/136 (8%)

Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240
            ++        L      + + L+    + + + V          +  ++      F + 
Sbjct: 232 AQLRDQHEIDALNSTINDLRNQLAQKPKEVVKEVVKEVPAAAPKQVVKVENLVFVTFAQG 291

Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            S+        L  I      S   + + G    +        N RLS  RA      L 
Sbjct: 292 KSVLTRAAKNALDNI-----KSGSHVQVVG---TASPEGSKEINDRLSQSRADVVANYLK 343

Query: 301 KSGVSEDRISKISGFA 316
             GV    I + +G  
Sbjct: 344 NRGVV---IEEATGKG 356


>gi|187250984|ref|YP_001875466.1| hypothetical protein Emin_0574 [Elusimicrobium minutum Pei191]
 gi|186971144|gb|ACC98129.1| hypothetical protein Emin_0574 [Elusimicrobium minutum Pei191]
          Length = 549

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 83/300 (27%), Gaps = 29/300 (9%)

Query: 43  VLMAFFLVMWI---INATDDDT-------------KKAIEQYFNPFGKNLMTAS-----K 81
           +LMA F+ +     +  T                   A    F     +           
Sbjct: 8   LLMAIFVFILAGCTMQNTSSAKQLEQGKKYYEEGNYDAARDNFIDVMMHGTPQEYAEANM 67

Query: 82  GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141
            +    N        K     D    K +  +    T  + + Q + +     + + ++ 
Sbjct: 68  YVNKIHNQLGNVEPPKFIPDTDAEKAKAAQTVTDAKTQAEAEAQAIIDKANAEAEAIRTA 127

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
               +  ++         +         +        ++    + + + + + +A     
Sbjct: 128 AAGTTQAKEEVAAAKEEAAPTGVVVEEAKPYDPFEYYARLDPNSYEAQAKREQVAANTLI 187

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L     D++      +       I  ID  +  +FD  S       + +L+ +  ++  
Sbjct: 188 NLRQQAVDSLSARKGVKIYFRNNDIDAIDIESAAIFD-KSGQYSDNGLKILEDLYTLMVL 246

Query: 262 STEVISIRGHTDASPFRNIARDNWRLS-LDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
           S     +              D+  LS + +A +    L+  G+S  ++S   G  +   
Sbjct: 247 SPTPSFVI------LPPGSYTDDVNLSGVKQAVALSSYLIYKGISPAKLSYNMGLYNEEP 300


>gi|21230907|ref|NP_636824.1| hypothetical protein XCC1451 [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66769094|ref|YP_243856.1| hypothetical protein XC_2787 [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|21112519|gb|AAM40748.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66574426|gb|AAY49836.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. 8004]
          Length = 238

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)

Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFL 49
          +++   D        W I YAD MT +M  FL
Sbjct: 9  RRRNKDDGEK---PFW-ISYADLMTAMMVLFL 36



 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 57/178 (32%), Gaps = 31/178 (17%)

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
               +  +   ++  +   ++   +  ++      +       IS         F  +S 
Sbjct: 44  AAVTRVVEGPAEIRAREIQSVCEQLGRDLSGVSEIQINCADQRISF---PTVGTFGFNSY 100

Query: 243 IPLPETIVVLQKIGEVL---------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
               E    L ++   +             + + + G+TD    +     N  LSL R+ 
Sbjct: 101 RLPAEADGALAQLVPAVLNAADGELGKKWLKQVVVEGYTDT---KGGYLYNLHLSLQRSE 157

Query: 294 SAYQVLMK------SGVSEDRISKISGF----AHHRLKIASD--PMNSANRRIDILVE 339
               +LM         +S++++S++               ++       +RR+++ ++
Sbjct: 158 WVLCLLMDPSKNKSLALSDEQLSRVRKLFLAGG----VSFNNQRTTADESRRVELRIQ 211


>gi|209525997|ref|ZP_03274530.1| conserved hypothetical protein [Arthrospira maxima CS-328]
 gi|209493523|gb|EDZ93845.1| conserved hypothetical protein [Arthrospira maxima CS-328]
          Length = 266

 Score = 44.2 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 61/216 (28%), Gaps = 36/216 (16%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           +D   S +++    +  L         +   LQ    ++ + L       +      E  
Sbjct: 48  SDATASRSEQLEVQMSELQSRLQQQTTQVTGLQGEVARLQTELRNRGDRIMQLQGEVERL 107

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVIS-----IRGHTDA 274
           ++  +I + D  +   FD  S+    E    +       +    E        + GHTD 
Sbjct: 108 KSPPVIVLRDSSSRT-FDSGSAAISLELGEFIDNKLVAQIKDFAEDYEGYVVEVIGHTDG 166

Query: 275 SPFRNIAR----------------------DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312
                                          N  L L RA S  Q L  +   +      
Sbjct: 167 QVTGGGYSNLDQVLEEVARNNQAVTSLVPGSNADLGLMRALSVVQRLQGNEELQSLGLTF 226

Query: 313 SGFAHHRLKIASDPMNSAN-------RRIDILVEDR 341
             ++  +L  AS    S N       RRI+I    +
Sbjct: 227 KAYSAAQLYEASGNYASINRTSDPSRRRIEIRFTPK 262


>gi|293373639|ref|ZP_06619986.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292631294|gb|EFF49925.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 438

 Score = 44.2 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +S   + E+ +  L  I E+       ++I G  D+         N  L   RA
Sbjct: 338 YFFFQLNSDRLVDESQIVNLDDIAEISKAHNLKVTISGAADS--ATGTQSINQELGQRRA 395

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328
               Q L+  GV E  +  +  F       A+D   
Sbjct: 396 RYVAQKLIDRGVPEG-LIHLHSFGGIDKFKANDSNR 430


>gi|302345683|ref|YP_003814036.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302149640|gb|ADK95902.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 378

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/220 (10%), Positives = 63/220 (28%), Gaps = 12/220 (5%)

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
                 +   + S++      ++ K+     N +  ++ +   E+   + ++  +   ++
Sbjct: 155 GSAKQFQFYVEPSINFAFLGQSKSKELVATGNALAPVAVADHQEYGYKAASQAGQPAYNI 214

Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217
             S     +    +           I+  + +  +  L  +I+   +        + V  
Sbjct: 215 NNSFVQLNAGLVYKFANSNGTHNFTIVTPRDQAEIDALNAQINELRNRKPEVITKEVVKQ 274

Query: 218 ETTRTGILISII-DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276
                  +            F +  S    +    L  + + +      + + G    + 
Sbjct: 275 VVKEVPSVKEFTVSDLVFVTFAQGKSALTKDAKAALNNVKQGV-----HVQVVG---TAS 326

Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
                  N RLS  RA      L   GV    + + +G  
Sbjct: 327 PEGSKELNDRLSQARADVVANYLKGRGVI---VDEATGKG 363


>gi|317502610|ref|ZP_07960731.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666291|gb|EFV05837.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 355

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 39/132 (29%), Gaps = 17/132 (12%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
                  L      + + L+    + I + V      + +            F +  S  
Sbjct: 226 DQSEIDALNSQISDLRNELAKKPKEVIKEVVKEVPGASVV------NPLFVTFAQGKSNL 279

Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
             E   VL  I +        + I G    S     +  N +LS DRA      L   GV
Sbjct: 280 TSEAKSVLDNIAK-----GSTVQIVG---TSSPEGSSSLNKKLSQDRANVVANYLKNKGV 331

Query: 305 SEDRISKISGFA 316
           +   + + +G  
Sbjct: 332 N---VEQANGKG 340


>gi|228900776|ref|ZP_04064992.1| Excalibur domain protein [Bacillus thuringiensis IBL 4222]
 gi|228858876|gb|EEN03320.1| Excalibur domain protein [Bacillus thuringiensis IBL 4222]
          Length = 329

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 53/183 (28%), Gaps = 3/183 (1%)

Query: 37  YADFMTVLMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           +A    +L  FFLV+ I++         K+ I           +        E+     +
Sbjct: 68  FAILSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALLGISAPSSEKTTATST 127

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                +    +   K  ++ K      +KQ              +  +       R  E 
Sbjct: 128 KVASNNEEQKDSEKKKELEKKEADEKTQKQEDEKRQAEEQARKQEDEKRQAEEQARKQED 187

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
            K L +    ++   K          +++    + + R Q+  ++++   +    +   +
Sbjct: 188 EKRLAEEQARKQEDEKRLAEEQARKQEDEKRLAEEQARKQEDEERLADEQARKQQEEQKR 247

Query: 214 GVL 216
              
Sbjct: 248 QAD 250


>gi|218506976|ref|ZP_03504854.1| hypothetical protein RetlB5_04850 [Rhizobium etli Brasil 5]
          Length = 39

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341
           +  DR+    GF   +     D  ++   NRRI++ + ++
Sbjct: 1   MPADRLVAA-GFGEFQPIAPGDAPDARATNRRIELKLTEK 39


>gi|146310017|ref|YP_001175091.1| N-acetylmuramoyl-l-alanine amidase II [Enterobacter sp. 638]
 gi|145316893|gb|ABP59040.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter sp. 638]
          Length = 447

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 72/260 (27%), Gaps = 13/260 (5%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNL--MTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           +  +  D   K+++       G          G    ++    ++++   L +   +T+N
Sbjct: 49  YAFSQVD---KRSVALDIKQTGVIQGLPLQFSGNNLVKSIRSGTAKDAQSLRLVVDLTQN 105

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
                +   N          N                +       +    + +  K+ N 
Sbjct: 106 GKTRAVKQQNGANYTVVFTINADAPPPPPPPPVVAKRVEAPIVTSRPSEPARNPFKAEND 165

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229
                    +  +  A  R        K I +  +G    +        T    + I+I 
Sbjct: 166 RMTSVTSSNTVTRPAARARPATNTSDEKVIIAIDAGHGGQDPGAIGPGGTREKNVTIAIA 225

Query: 230 DQ-----RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RD 283
            +      + PMF         +  + +    +V         +  H DA+P R+     
Sbjct: 226 RKLRERLNDDPMFK-GVMTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGAS 284

Query: 284 NWRLSLDRAYS-AYQVLMKS 302
            W LS  RA S     L + 
Sbjct: 285 VWVLSNRRANSEMANWLEEH 304


>gi|119513344|ref|ZP_01632380.1| chemotaxis protein MotB, putative [Nodularia spumigena CCY9414]
 gi|119462009|gb|EAW43010.1| chemotaxis protein MotB, putative [Nodularia spumigena CCY9414]
          Length = 216

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 16/119 (13%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L          +  +V +     +  +       ISI +     +F + S+   PE   
Sbjct: 46  QLAQKDVPKRLIIGNVVGEMKSNNINVKVNPETGDISIQES---ILFAQGSNELKPEGKA 102

Query: 251 VLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            L +            E   +    + I GHT +       + N  LSL R+ S Y+ +
Sbjct: 103 FLSRFIPVYSGVIFSKEEFENEISRVVIEGHTSSE---GDEKINLELSLMRSLSVYKYI 158


>gi|294506100|ref|YP_003570158.1| Conserved hypothetical protein containing PKD repeat [Salinibacter
           ruber M8]
 gi|294342428|emb|CBH23206.1| Conserved hypothetical protein containing PKD repeat [Salinibacter
           ruber M8]
          Length = 575

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 17/107 (15%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291
           NT  F + +S         LQ+  EVL       + + G                LS DR
Sbjct: 469 NTVYFARRASSLDSAARQKLQENAEVLRTCPNLSVRVEGFA-----APDEPTPLLLSRDR 523

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-----MNSANRR 333
           A +  +    +G++  RI+  SG          DP      +  NRR
Sbjct: 524 ARAVAEFYEDNGIAPGRITT-SGEG-----AVGDPGGKKGADEQNRR 564


>gi|296113886|ref|YP_003627824.1| hypothetical protein MCR_1674 [Moraxella catarrhalis RH4]
 gi|295921580|gb|ADG61931.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
          Length = 228

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
              +  +  QD  ++I   L    AD++ K    +  +  + IS +      +F    S 
Sbjct: 38  QVRQIAEEYQDTQEQIYKALLHEFADDLPKW-GAKIDKDTLTISFLSPD--ILFKTGQSD 94

Query: 244 PLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDR 291
                  +L           +    S   I I GHT +     +  D     N RLS DR
Sbjct: 95  LQDNYKEILSDFFPRYIKVIDRYKDSINEIRIEGHTSSEWAAGVDADIAYFENMRLSQDR 154

Query: 292 AYSAYQV 298
             +  Q 
Sbjct: 155 TRTVLQF 161


>gi|229029881|ref|ZP_04185950.1| Excalibur domain protein [Bacillus cereus AH1271]
 gi|228731389|gb|EEL82302.1| Excalibur domain protein [Bacillus cereus AH1271]
          Length = 312

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 51/179 (28%), Gaps = 4/179 (2%)

Query: 37  YADFMTVLMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           +A    +L  FFLV+ I++         K+ I           +++      E+      
Sbjct: 66  FATLSLILFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFVALSSILAPSSEKTTATNK 125

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                +    +   K + +      ++K+              SQ  E  +         
Sbjct: 126 QVASNNAEKKDDKKKEADEKTQKQEDEKRLADEQARKQED-EKSQAEEQARKQQEEQKRL 184

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
             +  +    E+    +E        ++++   + +K+ ++  +           +   
Sbjct: 185 ADEEARKQQEEQKRLADEQARKQQEEQKRLADEQARKQQEEQKRLADEQARKQQEEQKR 243


>gi|69146493|gb|AAZ03554.1| McnE [Microcystis sp. NIVA-CYA 172/5]
          Length = 1418

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 91/329 (27%), Gaps = 45/329 (13%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           FMT+L AFF+++   +         +              S  I         +   + D
Sbjct: 322 FMTLLAAFFVLISRYS----GQLDVLVGS-----PIANRNSSAIEKLMGFFANTLALRGD 372

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
           +S +    +    +K  + +           +      +   +   S     +    L  
Sbjct: 373 MSGNPSFLELLERVKQTTLSAYAHQDLPFEMLV----EKLQLNRDLSHNPLIQVMFSLQN 428

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-LFE 218
           +   E S++  +   LP LS E       +    +++ ++ +             +    
Sbjct: 429 TPQSEVSLSGLKMESLP-LSVELKARFDLEVNFWEVSDRLEAVWCYSTDLFAAPTINQMG 487

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
                +L +I    N  +F+  S +   E   +L    E          I    +    R
Sbjct: 488 QHFQNLLTAIAANPNMGIFEL-SMLSDEERYQLLSLWNETHTDYPSDKCIHQLFEEQVKR 546

Query: 279 NIAR-----DNWRLSLD----RAYSAYQVLMKSGVSEDRIS---------KISGF----- 315
                       +L+ +    RA      L K GV  D +           I G      
Sbjct: 547 TPDGVAVVCSEQKLTYNELNCRANQLAHYLQKLGVKPDELVGICLERSLDMIVGLLAILK 606

Query: 316 --AHHRLKIASDPMNSANRRIDILVEDRQ 342
               +       P      RI  +++D Q
Sbjct: 607 VGGAYVPIDPDYPQE----RISFMLQDTQ 631


>gi|251733449|emb|CAR82474.1| pal [Rhizobium galegae]
          Length = 87

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
             S+    +    L +  + L    +  I++ GH D          N  L   RA +A +
Sbjct: 1   TDSTSIRADAQQTLDRQAQWLGRYPKYAITVEGHADER---GTREYNLALGARRAAAAKE 57

Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322
            L   GV  +R+  IS +   R   
Sbjct: 58  YLASRGVPANRMKTIS-YGKERPVA 81


>gi|90424373|ref|YP_532743.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
 gi|90106387|gb|ABD88424.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
          Length = 218

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 20/171 (11%)

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
           +          +  +        L       L+ L    +   V  +         I++ 
Sbjct: 58  DSVAEAGKAAVVCGVAGAVVGAQLDAYEQQLLNELQVAGVKMNVQQDA-------RILEM 110

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290
               +F ++ +     +   L  +G++     +    I GH+ +            ++L 
Sbjct: 111 EEPILFSRADARLSSTSANRLIAVGKIFQKFNQRQVDIIGHSASDEAD-------EVALA 163

Query: 291 RAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKIAS--DPMNSANRRIDILV 338
           RA      L +  ++  R+  ++           +  +     NRR+ I V
Sbjct: 164 RAKVVTSRLKE--MTGGRLPLRMRSKGSSEPVGDNRTETGRDRNRRVTIFV 212


>gi|83592411|ref|YP_426163.1| hypothetical protein Rru_A1075 [Rhodospirillum rubrum ATCC 11170]
 gi|83575325|gb|ABC21876.1| hypothetical protein Rru_A1075 [Rhodospirillum rubrum ATCC 11170]
          Length = 501

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 61/272 (22%), Gaps = 11/272 (4%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P    +   ++ +  +   P  +   +  ++  E + K                Q +  
Sbjct: 238 KPAEPVMAKPAEPVVAKPAEPVVAKPAEPVMAKAEPVVKPPPQPTKERVTLVSPSQIVRP 297

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
           +          E         S+      +       +        P        A   +
Sbjct: 298 SAPVSLVGPTDEVPSTVAVAPSKPPATSQRIALSTGGVPIRTEEPAPAAPPRAASAPAAQ 357

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247
              Q      +   +   A            +     +    D      F   ++     
Sbjct: 358 TAPQAAPPTPAVKPAPQAAAPAASPAAPPPQQLAARTAPAQADGGMAIRFASGTADLPAS 417

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
               L  +   L        +      +     A    RLSL RA +    LM  GV   
Sbjct: 418 AAGELDAVVRSLTDDPTRRVVLQAYATADASGGANRAKRLSLTRALNVRAYLMDKGVRSP 477

Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            I ++               +    R+DI V 
Sbjct: 478 SI-EVRAMGDQ----GGGTAD----RVDIRVT 500


>gi|332708989|ref|ZP_08428959.1| hypothetical protein LYNGBM3L_32710 [Lyngbya majuscula 3L]
 gi|332352178|gb|EGJ31748.1| hypothetical protein LYNGBM3L_32710 [Lyngbya majuscula 3L]
          Length = 284

 Score = 44.2 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 71/240 (29%), Gaps = 46/240 (19%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           ++    S   D  + +D       E +  + +   +  L +   +   R KR  D  K +
Sbjct: 44  AQTALESTIDDLTRSEDEVVQLARENAELRAKAVRVDQLERGVAIWRARAKRSTDRQKAL 103

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
              +  L           +T      I +I  +    FD  S+         +++     
Sbjct: 104 EQQVRALQVQIAAAPKPPDTPP----IIVIKDQGAYRFDSGSAEIPSAMKDYIRQQIVPA 159

Query: 260 AHST------EVISIRGHTDASPFRNIAR---------------------DNWRLSLDRA 292
             S        V+ + GHTD  P                            N  L L RA
Sbjct: 160 IESNAKDYEINVVELIGHTDGQPNLGAGNIDQTIGNVVNKNSSISQLRPGSNADLGLMRA 219

Query: 293 YSAYQVLMKSGVSEDRI--SKISGFAHHRLKIAS----------DPMNSANRRIDILVED 340
            +  Q+L +    E R+   +   ++  +L + +          D      RRI+I    
Sbjct: 220 LAVVQLLREIQSKEGRLKGLQFRAYSAAQLILPNGKIAPISLKDDQTR---RRIEIRFTR 276


>gi|218234366|ref|YP_002366871.1| excalibur domain family [Bacillus cereus B4264]
 gi|218162323|gb|ACK62315.1| excalibur domain family [Bacillus cereus B4264]
          Length = 287

 Score = 44.2 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 5/161 (3%)

Query: 40  FMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           F T+   L  FFLV+ I++          +         +  A  GI D  +  E+++  
Sbjct: 66  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALSGISDPSS--EKTTAT 123

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
              ++ +    K+S   K     +  +  + + +   L+  Q  +        D +  K 
Sbjct: 124 STKVASNNEEPKDSEQKKELEKKEADEKTQKQEDEKRLAEEQARKQEDEKRQADEQARKQ 183

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +         +++       + E+    + +++ Q   +
Sbjct: 184 QEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQ 224


>gi|258648297|ref|ZP_05735766.1| putative immunoreactiveantigen PG32 [Prevotella tannerae ATCC
           51259]
 gi|260851607|gb|EEX71476.1| putative immunoreactiveantigen PG32 [Prevotella tannerae ATCC
           51259]
          Length = 376

 Score = 44.2 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 12/130 (9%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
                +  L  ++ +    +V + + + +    T +   IS+ +      F +       
Sbjct: 244 ALNDEINSLRAELEAKPKEVVKEVVKEVIKEVPTVSTQKISV-ENLVFVTFAQGKHFLTN 302

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           +    L  I          + + G    +        N RLS  RA      L + GV  
Sbjct: 303 DAKKALNSIKA-----GSHVQVVG---TASPEGSKAFNDRLSQSRADVVANYLKERGVI- 353

Query: 307 DRISKISGFA 316
             I + +G  
Sbjct: 354 --IDEATGKG 361


>gi|153872262|ref|ZP_02001204.1| OmpA/MotB [Beggiatoa sp. PS]
 gi|152071269|gb|EDN68793.1| OmpA/MotB [Beggiatoa sp. PS]
          Length = 612

 Score = 44.2 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 16/158 (10%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
           +L++L K   +      +  I   +   T    I  + +       F       L     
Sbjct: 464 QLKELQKAQPAFAGIDTSGFIDAELEIHTLTQRIEKTALYFSEGTGFMPGQETMLDNLFA 523

Query: 251 VLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
            +Q++        + +   + G+TD          N +L   RA      L   G+ +  
Sbjct: 524 EIQQLLAFSQELNQQVQLQVIGNTDGV---GTQFYNQQLGQQRAELVGDWLKTHGLEKRY 580

Query: 309 IS----KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342
           +         F  +      +P    NR +   +  ++
Sbjct: 581 LVITLPAQIRFGENEP----NPG---NRNVSFRIIGKE 611


>gi|330720905|gb|EGG99087.1| Type IIA topoisomerase (DNA gyrase/topo II2C topoisomerase IV)2C A
           subunit [gamma proteobacterium IMCC2047]
          Length = 313

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 11/111 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH-TDASPFRNIARDNWRLS 288
                 FD  +          L+ +   L+ +T     + GH TD  P  ++ +     S
Sbjct: 212 DLRNLSFD-GNDEVTVVAEQRLKPVANALSKNTRLECYVVGHLTDEQPLTDLKKR----S 266

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
           L RA S  + L+K GV+ D+++   G                N RI ++++
Sbjct: 267 LARAESVIKALVKLGVNADQLNA-QGVGPLAPIRRGTEN--LN-RISLVLQ 313


>gi|302340616|ref|YP_003805822.1| hypothetical protein Spirs_4148 [Spirochaeta smaragdinae DSM 11293]
 gi|301637801|gb|ADK83228.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)protein [Spirochaeta smaragdinae DSM 11293]
          Length = 832

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 70/267 (26%), Gaps = 23/267 (8%)

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE---- 152
            +D         +S    + +T  +       +         + E       +D++    
Sbjct: 561 TVDYLKGATAEASSDSFLLDTTPPEVNLAVTSSPFAETDEGVEGEVFITVQAKDNDGIAD 620

Query: 153 -KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
              + + +  ++ ++ +   +        +K             + ++S    G      
Sbjct: 621 WSMELVDEKGEVLRAYDGAGDPSGDITWNQKTDLKAPNVDASRFSLRLSVADEGGNVATF 680

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---- 267
            + V  +                 +F    S        +L +  + +     +      
Sbjct: 681 TEPVPLDILLVKKDGKFYLSVPNVIFGAYRSELDSAGAEMLTRNNQTIDRVVGIYDRYPS 740

Query: 268 ----IRGHTDASPFRNIARDNWR-----LSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
               + GH                    L+  RA +    L+  G+SE++I     F   
Sbjct: 741 YDLILEGHALNIYRGTGREAREEAILQPLTERRAATVKNALVDQGMSEEKIET-QAFGGR 799

Query: 319 RLKIASDPMNS---ANRRIDILVEDRQ 342
               A     S     RR++ ++   +
Sbjct: 800 FP-NADVTDRSLWWKVRRVEFVMVPPE 825


>gi|145308172|gb|ABP57358.1| hypothetical protein bst103 [Bacteroides uniformis]
          Length = 321

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 7/118 (5%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPETIV-VLQKI 255
                  +    K +  E     ++  + D          F  +++     +    L ++
Sbjct: 204 KDKQNPDSLVSNKFITAEGHNPMVVNHVSDSCIGAPVYFFFTLNTARLTDVSQKLNLDEL 263

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
             V       + + G  D+S     +  N  LS  RA      L + G+  +RI+KIS
Sbjct: 264 ARVAKKYDLHVRVTGAADSS--TGTSGINDSLSQSRADFIVSELKQRGIPAERITKIS 319


>gi|60682286|ref|YP_212430.1| hypothetical protein BF2815 [Bacteroides fragilis NCTC 9343]
 gi|265766286|ref|ZP_06094327.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
 gi|60493720|emb|CAH08509.1| putative exported protein [Bacteroides fragilis NCTC 9343]
 gi|263253954|gb|EEZ25419.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
          Length = 365

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              + +   ++   L +   ++   L         + ++    +  + I I       MF
Sbjct: 216 PEADLLEIKEKIGMLCEEVMQMKQELKERRKITDGQNLMIVPPKDALSIDI-------MF 268

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           D+ SS    E    +  IGE + ++   I I   +D    +        L   R+ +  +
Sbjct: 269 DEFSSFVSEEQGQKIDGIGEWMKNNNASIRIIAFSDNLTDKKAD---QELRKRRSEAIRK 325

Query: 298 VLMKS-GVSEDRISK 311
           +L++   +S +RIS+
Sbjct: 326 ILIEKYHISPERISE 340


>gi|53714224|ref|YP_100216.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
 gi|52217089|dbj|BAD49682.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
          Length = 365

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              + +   ++   L +   ++   L         + ++    +  + I I       MF
Sbjct: 216 PEADLLEIKEKIGMLCEEVMQMKQELKERRKITDGQNLMIVPPKDALSIDI-------MF 268

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           D+ SS    E    +  IGE + ++   I I   +D    +        L   R+ +  +
Sbjct: 269 DEFSSFVSEEQGQKIDGIGEWMKNNNASIRIIAFSDNLTDKKAD---QELRKRRSEAIRK 325

Query: 298 VLMKS-GVSEDRISK 311
           +L++   +S +RIS+
Sbjct: 326 ILIEKYHISPERISE 340


>gi|291516020|emb|CBK65230.1| OmpA family [Alistipes shahii WAL 8301]
          Length = 389

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 5/132 (3%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
                V ++  + +     +  +   +        F    +    + +  L+        
Sbjct: 257 ASKNSVLNDENEKLRNAPAKVVVEQKVSASPVVLFFRIGKATLDSKELTNLEFYVRNAMK 316

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRL 320
                +      A         N RLS  R    Y +L  K GV+ +R+ +         
Sbjct: 317 LDSDKTFTLIGSADKDTGNRELNQRLSEQRMEYVYDLLKNKYGVAPERLVR-KAEGDTNN 375

Query: 321 KIASDPMNSANR 332
           + + +P    NR
Sbjct: 376 RFS-EPE--LNR 384


>gi|262274306|ref|ZP_06052117.1| putative outer membrane protein [Grimontia hollisae CIP 101886]
 gi|262220869|gb|EEY72183.1| putative outer membrane protein [Grimontia hollisae CIP 101886]
          Length = 268

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +      + +  L ++ + L H   + ++I G  D+       + N  L+  RA S
Sbjct: 164 LFPVNEYQLTNKGVQTLFEVIDNLKHLPVDELTIYGVADS---SGNYKKNRVLADRRAQS 220

Query: 295 AYQVLMKSGVS 305
               L++ G++
Sbjct: 221 VRTFLVEEGLN 231


>gi|91789406|ref|YP_550358.1| OmpA/MotB [Polaromonas sp. JS666]
 gi|91698631|gb|ABE45460.1| OmpA/MotB [Polaromonas sp. JS666]
          Length = 196

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 9/114 (7%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + +        F    +         +  + +  A S   + I G  DA+     A  N 
Sbjct: 92  VKVEYGVVKFYFASGKADLAAGAGDAMADLVKA-AKSGRRLVIAGFHDAT---GDATKNA 147

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339
            L+  RA +    L  +GV+E +I         ++  +    ++  RR++I ++
Sbjct: 148 SLARQRALAVRDALKAAGVAERQIELKK---PEQMAGSGSDADA--RRVEISIQ 196


>gi|301163760|emb|CBW23315.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 365

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
              + +   ++   L +   ++   L         + ++    +  + I I       MF
Sbjct: 216 PEADLLEIKEKIGMLCEEVMQMKQELKERRKITDGQNLMIVPQKDALSIDI-------MF 268

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297
           D+ SS    E    +  IGE + ++   I I   +D    +        L   R+ +  +
Sbjct: 269 DEFSSFVSEEQGQKIDGIGEWMKNNNASIRIIAFSDNLTDKKAD---QELRKRRSEAIRK 325

Query: 298 VLMKS-GVSEDRISK 311
           +L++   +S +RIS+
Sbjct: 326 ILIEKYHISPERISE 340


>gi|255010398|ref|ZP_05282524.1| hypothetical protein Bfra3_14774 [Bacteroides fragilis 3_1_12]
 gi|313148197|ref|ZP_07810390.1| predicted protein [Bacteroides fragilis 3_1_12]
 gi|313136964|gb|EFR54324.1| predicted protein [Bacteroides fragilis 3_1_12]
          Length = 365

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 11/121 (9%)

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251
           L +   ++   L         + ++    +  + I I       MFD+ SS    E    
Sbjct: 230 LCEEVMQMKQELKERRKIMDGQNLMIVPQKDALSIDI-------MFDEFSSFVSEEQGQK 282

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
           +  IGE +  +   I I   +D    +   R    L   R+ +  ++L+ K  ++ +RI+
Sbjct: 283 IDGIGEWMKDNNSSIQIIAFSDNLTDKKADR---ELRSRRSEAIRKILIEKHHIAPERIT 339

Query: 311 K 311
           +
Sbjct: 340 E 340


>gi|229150407|ref|ZP_04278624.1| Excalibur domain protein [Bacillus cereus m1550]
 gi|228633104|gb|EEK89716.1| Excalibur domain protein [Bacillus cereus m1550]
          Length = 289

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 5/161 (3%)

Query: 40  FMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
           F T+   L  FFLV+ I++          +         +  A  GI D  +  E+++  
Sbjct: 68  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALSGISDPSS--EKTTAT 125

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
              ++ +    K+S   K     +  +  + + +   L+  Q  +        D +  K 
Sbjct: 126 STKVASNNEEPKDSEQKKELEKKEADEKTQKQEDEKRLAEEQARKQEDEKRQADEQARKQ 185

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
             +         +++       + E+    + +++ Q   +
Sbjct: 186 QEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQ 226


>gi|253570599|ref|ZP_04848007.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
 gi|251839548|gb|EES67631.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
          Length = 396

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L+ + +K++   +                    +I  I   N   F  + S    E   
Sbjct: 251 DLESMRRKLNEMSAENERLKKA-LAEGNVQDARTIIKKIAAANLVTFPINKSKLDNEARA 309

Query: 251 VLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
            L  + E++         +I G+ DA       + N +LS +RA++ Y  L+K  GV E 
Sbjct: 310 NLGMLAEIIKSGDPEATYTITGYADA--GTGSKKGNEKLSKERAHAVYDCLVKEFGVKES 367

Query: 308 RI 309
           ++
Sbjct: 368 QL 369


>gi|90423193|ref|YP_531563.1| OmpA/MotB-like porin [Rhodopseudomonas palustris BisB18]
 gi|90105207|gb|ABD87244.1| OmpA/MotB-like porin [Rhodopseudomonas palustris BisB18]
          Length = 438

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           ++L     +         A       L +       +S +   +   F+  S+     ++
Sbjct: 301 QQLATADAESMPAKQPDAAVGAKTAALLDAKACQQKLSAVIAEDKISFEPKSAELSKASL 360

Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             L K+G  +A      I + G     PF   ++   RLS  RA +    L K GV   +
Sbjct: 361 AALTKLGSAIALCQPVQIEVAG-----PFDGGSKKALRLSQKRAEAVVGSLSKLGVGAAK 415

Query: 309 ISKISGF-----AHHRLKI 322
           ++ ++              
Sbjct: 416 LTAVAAVKPADGGKSGPIA 434


>gi|260771702|ref|ZP_05880621.1| hypothetical protein VIB_000141 [Vibrio metschnikovii CIP 69.14]
 gi|260613286|gb|EEX38486.1| hypothetical protein VIB_000141 [Vibrio metschnikovii CIP 69.14]
          Length = 235

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 17/174 (9%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237
               +     ++     L +  +  L    A+   + +    T   +L    D   T  F
Sbjct: 51  KDVAETYQQTQQAIYLSLLEAFAKDLDKWGAEIDRETLSVNFTAPEVLFGNGDANLTVQF 110

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-----ARDNWRLSLDRA 292
               S   P  + VL +   ++        I GHT +   ++        +N  LS  R 
Sbjct: 111 QMILSDFFPRYLNVLDQYRPIIQEIK----IEGHTSSRWNQDSSDYEAYFNNMNLSQART 166

Query: 293 YSAYQVLMKSG-VSEDRI------SKISGFAHHRLKIASD-PMNSANRRIDILV 338
            +    +MK   V  +            G++  +  + +       +RR+   V
Sbjct: 167 RTVLGYVMKLDSVGSEHYDWVKNNVAAVGYSSSKAVVKNGIEDEKRSRRVAFRV 220


>gi|296447611|ref|ZP_06889531.1| heavy metal translocating P-type ATPase [Methylosinus trichosporium
           OB3b]
 gi|296254876|gb|EFH01983.1| heavy metal translocating P-type ATPase [Methylosinus trichosporium
           OB3b]
          Length = 942

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 48/193 (24%), Gaps = 13/193 (6%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
           ++ Q              +         T  +          D        E    P   
Sbjct: 732 RRSQIDEPAAAGAPRRPERSRRLALAGATAAALAIAAGLAWRDWRPLFPVAETPPSPAQR 791

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +     ++R         +        V   +   +  ET           + +   F  
Sbjct: 792 EPAPSVVERPAEAPKTDARSGVAAGEGVESKLRAYLESETPPA--RKLAWFELDGVAFVP 849

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +   P     LQ I +VLA      +I   H DA           +LS  RA +    
Sbjct: 850 REARLQPSAQSRLQAIADVLATHPRARAIVAVHGDAK----------KLSKQRAEAVVLA 899

Query: 299 LMKSGVSEDRISK 311
           L + GV   R+  
Sbjct: 900 LTRLGVDASRLRA 912


>gi|224535602|ref|ZP_03676141.1| hypothetical protein BACCELL_00466 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522764|gb|EEF91869.1| hypothetical protein BACCELL_00466 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 376

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S L   V +   + +  ET      I      +   F +  S      +  ++++   + 
Sbjct: 244 SALQQEVNNLQNRVIPVETVVETSRI----PESIITFRQGRSTVDASQLPNVERVASYMK 299

Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK-ISGFAH 317
                  + +G+         A  N R++  RA +   +L+ K  ++  RI+    G   
Sbjct: 300 KYANTTVVIKGYASPE---GSAEVNARIAKARAEAVKTILVNKYKINPSRITAEGQGVGD 356

Query: 318 --HRL 320
                
Sbjct: 357 MFTEP 361


>gi|253699640|ref|YP_003020829.1| hypothetical protein GM21_1008 [Geobacter sp. M21]
 gi|251774490|gb|ACT17071.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 239

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 13/66 (19%)

Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWII---------NATDDDTKK---AIEQYF 69
                     W I Y+D MT LM  FLV+  +         + TD    +    I Q  
Sbjct: 10 KKASDEAEKPFW-ISYSDMMTALMVLFLVVMTVAILAVTNEASETDKQKTQRESEIAQLL 68

Query: 70 NPFGKN 75
               +
Sbjct: 69 AEIKAS 74


>gi|222085721|ref|YP_002544251.1| hypothetical protein Arad_2037 [Agrobacterium radiobacter K84]
 gi|221723169|gb|ACM26325.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 309

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 69/238 (28%), Gaps = 42/238 (17%)

Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202
            K   + D           D  + +   E          K   ++   ++  + K+    
Sbjct: 55  QKQLKSGDLSPADQAKLEKDWRELVLARETLDSIGTEGTKPEDLRELAKVAAVLKQHGVA 114

Query: 203 LSGLVADN---IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-- 257
           L+    +    +  G+          I  ++   T  F   S+      + +L       
Sbjct: 115 LAKAPDEVDRLLAAGLGGTGPHEWPPIINLEDVRTNYFQSGSTDLTRTFVQLLNTTVADE 174

Query: 258 ---VLAHST-EVISIRGHTDASPFRNI----------------------ARDNWRLSLDR 291
               L      ++ + GHTD  P                            DN  L L R
Sbjct: 175 IAGNLNDYDANIVEVIGHTDEQPVARRVSNLDDTLIGAMDGRLPISAVEPADNAGLGLAR 234

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANRRIDILVEDR 341
           A +   VL  +   + + + I   +  +L +  D +++          RRI+I V  R
Sbjct: 235 AIAVANVLKAN--PKLKNATILPMSAAQLILPGDTISAGQAGAVETR-RRIEIRVRGR 289


>gi|189467114|ref|ZP_03015899.1| hypothetical protein BACINT_03498 [Bacteroides intestinalis DSM
           17393]
 gi|189435378|gb|EDV04363.1| hypothetical protein BACINT_03498 [Bacteroides intestinalis DSM
           17393]
          Length = 376

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
           S L   V +   + V  ET      I      +   F +  S      +  ++++   + 
Sbjct: 244 SALQQEVNNLQNRAVPVETIVETSRI----PESIVTFRQGKSTVDASQLPNVERVASYMK 299

Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK-ISGFAH 317
                  + +G+         A  N R++  RA +   +L+ K  ++  RI+    G   
Sbjct: 300 KHANTTVVIKGYASPE---GSAEVNARIAKARAEAVKTILVNKYKINPSRITAEGQGVGD 356

Query: 318 --HRL 320
                
Sbjct: 357 MFTEP 361


>gi|149190743|ref|ZP_01869009.1| outer membrane protein [Vibrio shilonii AK1]
 gi|148835399|gb|EDL52370.1| outer membrane protein [Vibrio shilonii AK1]
          Length = 205

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD   S    +    ++++ ++L        +  G T +         N  L+  R  + 
Sbjct: 78  FDFDKSKLRSDQTSKVKRLVDMLEQYPNSNVVLIGDTSSE---GTDTYNKALAKRRTGAI 134

Query: 296 YQVLMKSGVSEDRISK 311
              L + G+  +RIS+
Sbjct: 135 RNELERMGIESERISE 150


>gi|300871117|ref|YP_003785989.1| hypothetical protein BP951000_1505 [Brachyspira pilosicoli 95/1000]
 gi|300688817|gb|ADK31488.1| hypothetical protein BP951000_1505 [Brachyspira pilosicoli 95/1000]
          Length = 197

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 29/156 (18%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHS 262
             +  +           +      ++  ++  +FD +SS+    +    L  +  VL  +
Sbjct: 32  ENITNEITTNTNSVYYVQNTKRGKLLILKDPILFDSNSSVVNTNKYAETLDYLSLVLKST 91

Query: 263 TE-VISIRGHTDASPFR---NIARDNW----------------RLSLDRAYSAYQVLMKS 302
               I I GH D+S  R        N                  LS  R+ +   +L  +
Sbjct: 92  NILNIYIEGHIDSSEVRYMNKNTVYNLSTTNNILYLYDRNNEVDLSYLRSLAVGDLLTDN 151

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
              ++++  I       L     P    NRR++ ++
Sbjct: 152 ---DNKLKAI---GLQNLIDYGTPE--QNRRVEFVI 179


>gi|218261435|ref|ZP_03476250.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224010|gb|EEC96660.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
           DSM 18315]
          Length = 52

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 3/39 (7%)

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337
             GV   +I    G         ++     + NRR +I+
Sbjct: 1   DYGVKPLQIQPC-GRGEFMPVDDNETADGRAKNRRTEII 38


>gi|253990525|ref|YP_003041881.1| hypothetical protein PAU_03051 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638903|emb|CAR67518.1| similar to putative exported protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781975|emb|CAQ85139.1| similar to putative exported protein [Photorhabdus asymbiotica]
          Length = 67

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILV 338
            + G    R    +      +ANRR++I +
Sbjct: 4   AVIGEGATRPVATNSTAAGRAANRRVEIRL 33


>gi|149926065|ref|ZP_01914328.1| hypothetical protein LMED105_03415 [Limnobacter sp. MED105]
 gi|149825353|gb|EDM84564.1| hypothetical protein LMED105_03415 [Limnobacter sp. MED105]
          Length = 253

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMW--IINATDDDTKKAIEQ 67
                 W I YAD MT LM  FLV+    + +     ++ +++
Sbjct: 14 EEAEKPFW-ISYADLMTALMILFLVIMVTALASITKKAEQTVKE 56


>gi|224025469|ref|ZP_03643835.1| hypothetical protein BACCOPRO_02209 [Bacteroides coprophilus DSM
           18228]
 gi|224018705|gb|EEF76703.1| hypothetical protein BACCOPRO_02209 [Bacteroides coprophilus DSM
           18228]
          Length = 494

 Score = 43.8 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/224 (10%), Positives = 57/224 (25%), Gaps = 19/224 (8%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
            +   +  +   + +   + + Q+    +  +S +  +          S+          
Sbjct: 78  ADGTQERELPPFVINGKVRDKVQQRMETLDGVSANPDAVVTVRRKNGSSQVLSYDASVPF 137

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222
               I                          D+  +++      V     + V   +   
Sbjct: 138 QRWMIGGNIQLRGYVTGCALCDDGDETATTGDILPEMTPEYYSPVMKPKEEIVKRRSETR 197

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-----LAHSTEVISIRGH--TDAS 275
              +          F ++SS   P+      ++  V     L      ++I G   T  +
Sbjct: 198 SARVQ---------FRQNSSNIRPDYKNNRAELDSVRQSILLVKDNNDLTITGIYVTGYA 248

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMK--SGVSEDRISKISGFAH 317
                   N  LS  RA S  + + +   G+    +  +     
Sbjct: 249 SPEGSFDYNMTLSERRAKSFTEYIKEDLKGIDPS-VYHVDWKGE 291


>gi|197103770|ref|YP_002129147.1| outer membrane protein [Phenylobacterium zucineum HLK1]
 gi|196477190|gb|ACG76718.1| outer membrane protein [Phenylobacterium zucineum HLK1]
          Length = 149

 Score = 43.8 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 9/112 (8%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           DQ     F+   +   PE   V+ +            +S+ G  DA         N  LS
Sbjct: 39  DQTVQIYFEPGQAEVTPEGRRVIAEAAAQARGCAVRRVSVLGLADA---AGDPSANLELS 95

Query: 289 LDRAYSAYQVLMKSGVSEDRI-SKISG-FAHHRLKIASDPMNSANRRIDILV 338
             RA S    L ++ +         +G          + P+    RR D+ +
Sbjct: 96  KKRAQSVTAALAQARLPAAEFQVAAAGQQGATTPAGQAAPLR---RRADVTL 144


>gi|42522707|ref|NP_968087.1| microtubule binding protein [Bdellovibrio bacteriovorus HD100]
 gi|39573903|emb|CAE79080.1| microtubule binding protein [Bdellovibrio bacteriovorus HD100]
          Length = 522

 Score = 43.8 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 58/216 (26%), Gaps = 29/216 (13%)

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
             ++   +  +    + E+   +L+ +      +        +     +   L     KE
Sbjct: 253 GQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAEEKAALAAGFGKE 312

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +      LS  +    K +  ++           G     I   +  +T    +      
Sbjct: 313 KAKLQGALSDTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQTGDVVL------ 366

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----------------------STEVIS 267
                 FD  S     E   VL+K   + +                        + +   
Sbjct: 367 DFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLFGNPKVSDKISAVEIIGFASPTYQGRF 426

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
           +  H+     +   + N  LS  RA S +  ++  G
Sbjct: 427 VDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEG 462


>gi|84500718|ref|ZP_00998967.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
 gi|84391671|gb|EAQ04003.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
          Length = 519

 Score = 43.8 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +    A  I+    G+  + + + V   T    + +S         F+ 
Sbjct: 362 DQLPEEIPIADQGTRFANAIAQAGGGIALEELQRMVSTLTPYERLTVSFR-------FEA 414

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299
            S++   ++   +++    L +             S     A  N R+S +RA +  + +
Sbjct: 415 GSALLDAQSRSNIEQFAAALENGLYDGREVMFVGFSDGSGDAATNLRISRERARAVRRAV 474

Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           + +      DRI      F         D       NRR+++ + 
Sbjct: 475 VLAAGDAELDRIRMTTDAFGEAMPMACDDSHWGRQVNRRVEVWIR 519


>gi|258648168|ref|ZP_05735637.1| putative immunoreactiveantigen PG32 [Prevotella tannerae ATCC
           51259]
 gi|260852048|gb|EEX71917.1| putative immunoreactiveantigen PG32 [Prevotella tannerae ATCC
           51259]
          Length = 382

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 13/135 (9%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
               +  +L D  ++I+   + L      K V+ ETT   +        +   F +  S+
Sbjct: 238 QLADKDGQLSDANRRIADLQNQLNDCRNRKPVVKETTNNLMT-------SAVTFRQGKSV 290

Query: 244 PLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
             P  +  ++++   LA+  E   + +G+            N +L+  RA +   +L+K 
Sbjct: 291 VDPSQMPNVERVATYLANHKEATVVIKGYASPE---GPLELNKKLAAARADAVKTILVKR 347

Query: 303 -GVSEDRISKISGFA 316
             ++  RI+   G  
Sbjct: 348 YRIAASRITA-EGQG 361


>gi|302878335|ref|YP_003846899.1| OmpA/MotB domain-containing protein [Gallionella
          capsiferriformans ES-2]
 gi|302581124|gb|ADL55135.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
          Length = 238

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 4/37 (10%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55
          ++   +        W I +AD MT LM  FL++  + 
Sbjct: 10 RRNKEEGEK---PFW-ISFADLMTALMVMFLLVMSVA 42


>gi|34499431|ref|NP_903646.1| hypothetical protein CV_3976 [Chromobacterium violaceum ATCC 12472]
 gi|34105283|gb|AAQ61638.1| hypothetical protein CV_3976 [Chromobacterium violaceum ATCC 12472]
          Length = 145

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+K ++   P     L  +   L  +  ++ IRGH       N        S  RA +  
Sbjct: 59  FEKMNAKLTPVGEAQLDLLLPKLKTAKSIL-IRGHCYRRDIGNAKAA----SQTRAANVR 113

Query: 297 QVLMKSGVSEDRIS 310
             LM +GV   +I+
Sbjct: 114 DYLMNAGVPSSKIT 127


>gi|330722512|gb|EGH00335.1| PsaB [gamma proteobacterium IMCC2047]
          Length = 55

 Score = 43.4 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341
           V  DR++   G+   + +  +D       NRR+  ++   
Sbjct: 10  VDRDRLTA-KGYGETQPRATNDSADGRQQNRRVTAVISAS 48


>gi|154252547|ref|YP_001413371.1| hypothetical protein Plav_2100 [Parvibaculum lavamentivorans DS-1]
 gi|154156497|gb|ABS63714.1| hypothetical protein Plav_2100 [Parvibaculum lavamentivorans DS-1]
          Length = 159

 Score = 43.4 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 10/105 (9%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             MF+   S         L    +     +  + ++ +      ++ A    RLSL RA 
Sbjct: 62  RIMFEPDESALSQGARDKLVAFAKDFTSRSGRLELKAYAGPPHDKSSAA--RRLSLRRAL 119

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338
           S  + LM SG+  +RI ++          +  P      R+DI +
Sbjct: 120 SVRRELMASGIVVERI-QVRALGGTS--DSGHPD-----RVDIKL 156


>gi|253564738|ref|ZP_04842194.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
 gi|251946203|gb|EES86580.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
          Length = 365

 Score = 43.4 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            +++    +   +  +  +   +  + +     I+          MFD+ SS    E   
Sbjct: 222 EIKEKIGMLCEEVMQMKQELKERRKITDGQNLMIVPQKDALSIDIMFDEFSSFVSEEQGQ 281

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309
            +  IGE + ++   I I   +D    +        L   R+ +  ++L++   +S +RI
Sbjct: 282 KIDGIGEWMKNNNASIRIIAFSDNLTDKKAD---QELRKRRSEAIRKILIEKYHISPERI 338

Query: 310 SK 311
           S+
Sbjct: 339 SE 340


>gi|149924013|ref|ZP_01912397.1| OmpA family protein [Plesiocystis pacifica SIR-1]
 gi|149815142|gb|EDM74694.1| OmpA family protein [Plesiocystis pacifica SIR-1]
          Length = 471

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 22/114 (19%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVL---------------AHSTEVISIRGHTDASPFRNIA 281
           FD   S    +    + +   VL                + +  + I G+TD       A
Sbjct: 211 FDSGKSEIKKDEEWKVAEAFAVLVHELAKLDKANEAVNGNLSAQLYIVGYTDTV---GKA 267

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRR 333
            DN +LS  RA S  +     G   +     +G     L + +        NRR
Sbjct: 268 SDNKKLSEARAKSIAKYFYDRGAWCE--IHYAGMGEKGLAVETGDSVDEVRNRR 319


>gi|310659034|ref|YP_003936755.1| motb (fragment) [Clostridium sticklandii DSM 519]
 gi|308825812|emb|CBH21850.1| MotB (fragment) [Clostridium sticklandii]
          Length = 43

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWI 53
          KK   ++    +  + + Y D MT+L+  F++ +I
Sbjct: 3  KKQKPEECKQKVAEYMLTYGDMMTLLLCSFVLFFI 37


>gi|189467578|ref|ZP_03016363.1| hypothetical protein BACINT_03968 [Bacteroides intestinalis DSM
           17393]
 gi|189435842|gb|EDV04827.1| hypothetical protein BACINT_03968 [Bacteroides intestinalis DSM
           17393]
          Length = 380

 Score = 43.4 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/230 (10%), Positives = 71/230 (30%), Gaps = 6/230 (2%)

Query: 91  ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150
                N     +  ++  N  + K  +   K          F  + S+ + +        
Sbjct: 135 GPGDTNSWSTRLGLNLNFNLGEEKAWTLGIKPAIVYDMQGDFSKTKSRFNANNATFELTA 194

Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
                 +C +     +  K  +        + +  ++ +   +D+    +   +  +   
Sbjct: 195 GLTYHFMCSNGSHHFTTVKPYDPVEVGELNDAVNRLRSQLNDKDMQLSNAVQQANNLQKE 254

Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269
           +            ++ +     +   F +  S+     +  ++++   +    E  + I+
Sbjct: 255 LADCRTQAANIETVVKTNRIPESIITFRQGKSVVDASQLPNVERVAIYMKKHPEAKVVIK 314

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK-ISGFAH 317
           G+            N +L+  RA +   +L+K   +++ RI+    G   
Sbjct: 315 GYASPE---GNLAFNEKLAKARAQAVKSILVKKYKINDTRITAEGQGIGD 361


>gi|251771622|gb|EES52198.1| OmpA family protein [Leptospirillum ferrodiazotrophum]
          Length = 223

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287
            + + T  F  +S+       +VL K+ E +  +   + +  G TD          N +L
Sbjct: 109 QEIQKTVYFSYNSARLSYWDKLVLNKVAEEIQKAPYRLIVLHGSTDPLV---SETYNKKL 165

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKIS 313
            L RA S    L+   +   +I   S
Sbjct: 166 GLWRALSVKHYLISRKIPAKKIRAYS 191


>gi|167763628|ref|ZP_02435755.1| hypothetical protein BACSTE_02003 [Bacteroides stercoris ATCC
           43183]
 gi|167698922|gb|EDS15501.1| hypothetical protein BACSTE_02003 [Bacteroides stercoris ATCC
           43183]
          Length = 424

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 235 PMFDKSSSIP-LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
             F++        +    L  I + L  + E  I I G+ D +        N +++L RA
Sbjct: 321 VYFERGKWKLDTDKYARELFTIAKTLKENPEIQIDICGYADHT---GGEAINKKVTLKRA 377

Query: 293 YSAYQVLMKSGVSEDRISKISGFA 316
            +  + L+K G+  +R+     + 
Sbjct: 378 EALKKFLVKVGIEPERLHT---YG 398


>gi|253570974|ref|ZP_04848382.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839923|gb|EES68006.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|313157091|gb|EFR56521.1| OmpA family protein [Alistipes sp. HGB5]
          Length = 466

 Score = 43.4 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+ +++     + +  L ++  V       + + G  D+S        N  LS 
Sbjct: 363 SPVYFFFNLNTAHLTDASQMLNLDELARVAKKYGLSLRVTGAADSS--TGTPVLNGSLST 420

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
            RA      L K G+  +RI K+S  G A H     +
Sbjct: 421 SRADYIVAELKKRGIPIERIVKVSRGGIADHVPVEVN 457


>gi|163796353|ref|ZP_02190314.1| Lysophospholipase [alpha proteobacterium BAL199]
 gi|159178495|gb|EDP63037.1| Lysophospholipase [alpha proteobacterium BAL199]
          Length = 364

 Score = 43.4 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/281 (9%), Positives = 62/281 (22%), Gaps = 29/281 (10%)

Query: 62  KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121
           ++     + P    L   +      ++ P  +  +    S      +        S   +
Sbjct: 112 RRPDAPQYAPLPDTLQNRTTAPRARESAPTLTPPSATKSSEPYRQVREPAVTPPKSAQPQ 171

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
                             +     +              T     I    +  +      
Sbjct: 172 VPAAAAVPTPTPPKPPAPAAPSVTASKAVPAAKAPEPPKTPPLPKIPSTASTPVAAPPPV 231

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
           K       +     +   ++  +      +   V                     F    
Sbjct: 232 KAEPEPTTQVAAATSGPAAAPSAPSSQGALGDVVRVP------------------FGSGQ 273

Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
           S    +    L  +   L       I +  + D            RLSL RA +    L+
Sbjct: 274 STLPDDAKGNLDSLAGRLRKDETLRIQLLAYADGDEDNANKA--RRLSLSRALAVRAYLI 331

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341
              V   R+  +    +        P +    R+D+++  R
Sbjct: 332 DKQVQSTRMD-VRALGNR---AKDSPKD----RVDVVLVSR 364


>gi|77464751|ref|YP_354255.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389169|gb|ABA80354.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/240 (10%), Positives = 66/240 (27%), Gaps = 16/240 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                    ++        +  + + +   S           ++          +  +  
Sbjct: 276 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 335

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S   +           +   +      Q L   I      +  D + +          +
Sbjct: 336 SSAPAQAAVAEAGFVDRRPSQVPLASDGQRLMNAIRIAGEEVPLDEVKRLTDLMAGADRL 395

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281
            I+         F++ +    P++   L ++ ++L       + + + G +D       A
Sbjct: 396 SITFR-------FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLVGFSDGR---GPA 445

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R N  LS +    A    ++  V E     + GF           +     NRR+++ + 
Sbjct: 446 RGNLDLSRE-RAEAVAAALREAVPELGPPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 504


>gi|328908054|gb|EGG27813.1| putative outer membrane protein A [Propionibacterium sp. P08]
          Length = 48

 Score = 43.4 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVED 340
           +G        ++D       NRR+ I V++
Sbjct: 18  AGKGEADPVASNDSEAGRRLNRRVTITVKE 47


>gi|223717791|dbj|BAH22765.1| nonribosomal peptide synthetase [Microcystis aeruginosa K-139]
          Length = 1386

 Score = 43.4 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 82/329 (24%), Gaps = 45/329 (13%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99
           FMT+L AFF++              I +Y       + +                     
Sbjct: 290 FMTLLAAFFVL--------------ISRYSGQLDVLVGSPIANRNSSAIEKLMGFFANTL 335

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
               +     S    +    Q         ++ +    ++ +  ++       +     +
Sbjct: 336 ALRGDMSRNPSFLELLERVKQTTLSAYAHQDLPFEMLVEKLQLNRDLSHNPLIQVMFSLQ 395

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-LFE 218
           +T   ++          PLS E       +    +++ ++ +             +    
Sbjct: 396 NTPQSEASLSGLKMESLPLSVELKARFDLEVNFWEVSDRLEAVWCYSTDLFAAPTINQMG 455

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
                +L +I    N  +F+  S +   E   +L    E          I    +    R
Sbjct: 456 QHFQNLLTAIAANPNMGIFEL-SMLSDEERYQLLSLWNETHTDYPSDKCIHQLFEEQVKR 514

Query: 279 NIARDNWRLSLD---------RAYSAYQVLMKSGVSEDRIS---------KISGF----- 315
                    S           RA      L K GV  + +           I G      
Sbjct: 515 TPNAVAVVCSQQQLTYNELNCRANQLAHYLQKLGVKPEELVGICLERSLDMIVGLLAILK 574

Query: 316 --AHHRLKIASDPMNSANRRIDILVEDRQ 342
               +       P      RI  +++D Q
Sbjct: 575 VGGAYVPIDPDYPQE----RISFMLQDTQ 599


>gi|298482722|ref|ZP_07000906.1| outer membrane protein [Bacteroides sp. D22]
 gi|298271185|gb|EFI12762.1| outer membrane protein [Bacteroides sp. D22]
          Length = 485

 Score = 43.4 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 10/107 (9%)

Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +++     + +  L  +  V       + I G  D+S        N  LS  RA
Sbjct: 377 YFFFSLNTARLTDASQMLNLDGLARVAKKYNLSVKITGAADSS--TGTPAINDSLSTARA 434

Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR--RIDIL 337
                 L + GV    + K+ G           P  + NR  R+++ 
Sbjct: 435 EFVAVELERRGVPTGMVIKV-GIGG---IANHIPTEA-NRHTRVELF 476


>gi|255017132|ref|ZP_05289258.1| hypothetical protein LmonF_03838 [Listeria monocytogenes FSL
          F2-515]
          Length = 51

 Score = 43.0 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%)

Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
          K+       +   +W I Y+D +T+L+A F+V++  ++ D    +
Sbjct: 3  KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKIR 47


>gi|303237223|ref|ZP_07323793.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302482610|gb|EFL45635.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 344

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 14/130 (10%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           + +  +  L  +I+   +        + +          +S         F ++      
Sbjct: 214 RDQAEIDALNAQINELRNRKPEVITKEVIKEVPAVKEFTVS---DLVFVTFAQAKYNLTN 270

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306
           E    L  + E        + I G    +     A  N  LS +RA    + L   GV  
Sbjct: 271 EAKAALDNVKE-----GSHVQIVG---TASPEGNAAFNQTLSENRAKVVAEYLSGRGVI- 321

Query: 307 DRISKISGFA 316
             + + +G  
Sbjct: 322 --VDEATGKG 329


>gi|282860282|ref|ZP_06269352.1| OmpA family protein [Prevotella bivia JCVIHMP010]
 gi|282586956|gb|EFB92191.1| OmpA family protein [Prevotella bivia JCVIHMP010]
          Length = 357

 Score = 43.0 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 16/131 (12%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
                 +  L  ++++    ++ + I +  +       +   I        F +      
Sbjct: 228 AAMNNEINSLRDQLAAKPKEVIKEVIKEVPVEAQKELCVEDLIF-----VTFAQGKYYLT 282

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305
            E    L K+ E        + I G    +        N RLS  RA    + L   GV 
Sbjct: 283 NEAKAALDKVAE-----GRHVQIVG---TASPEGPKALNDRLSQSRADEVAKYLQNKGVV 334

Query: 306 EDRISKISGFA 316
              I   +G  
Sbjct: 335 ---IDSSTGKG 342


>gi|171320543|ref|ZP_02909568.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
 gi|171094202|gb|EDT39284.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
          Length = 91

 Score = 43.0 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 18/74 (24%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKI 322
           + G TD +     A  N  L+  RA +    L  +GV+ED I       I+G A  +   
Sbjct: 27  LSGFTDKT---GSADANAELAKHRAQAVRDALKAAGVAEDHIILKKPETITGGADAK--- 80

Query: 323 ASDPMNSANRRIDI 336
                 +  RR++I
Sbjct: 81  -----EA--RRVEI 87


>gi|294787945|ref|ZP_06753189.1| putative OmpA/MotB [Simonsiella muelleri ATCC 29453]
 gi|294484238|gb|EFG31921.1| putative OmpA/MotB [Simonsiella muelleri ATCC 29453]
          Length = 180

 Score = 43.0 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 20/115 (17%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + +        F    +     T+  L+ I   +    + + +          +    N 
Sbjct: 85  VVVDGDIVRFYFATGKADVTANTLESLKGIVNGVKAGKKAVILT--------YSNVESNE 136

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVE 339
            L+ DRA +   VL+ +G+ +  I               +D      RR+++++ 
Sbjct: 137 NLARDRALAVRSVLLAAGIPDGSIQV------SNPTAETNDS-----RRVEVVLR 180


>gi|83591609|ref|YP_425361.1| hypothetical protein Rru_A0269 [Rhodospirillum rubrum ATCC 11170]
 gi|83574523|gb|ABC21074.1| hypothetical protein Rru_A0269 [Rhodospirillum rubrum ATCC 11170]
          Length = 293

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 57/211 (27%), Gaps = 10/211 (4%)

Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198
                       S   + +    D               +      A       +D    
Sbjct: 61  PPAAGAMEGALSSPTARLIEHGLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSC 120

Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--FDKS-SSIPLPETIVVLQKI 255
            +   S      +      E  R       +      M  F+   S +  P    ++  +
Sbjct: 121 WAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVFFEPGESGLGDPTARSLVSSV 180

Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
              L      + + G+ D             L+++RA +    L + GVS   +  +S  
Sbjct: 181 AHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVI-LSAR 239

Query: 316 AHHRL-----KIASDPMNS-ANRRIDILVED 340
                       A D + +   RR+++++ED
Sbjct: 240 VSVDPPTQTGSDAEDALAATRERRVEMIIED 270


>gi|29653408|ref|NP_819100.1| putative lipoprotein [Coxiella burnetii RSA 493]
 gi|153209098|ref|ZP_01947241.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
 gi|154707266|ref|YP_001425363.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
 gi|161830938|ref|YP_001596037.1| putative lipoprotein [Coxiella burnetii RSA 331]
 gi|165923897|ref|ZP_02219729.1| putative lipoprotein [Coxiella burnetii RSA 334]
 gi|212213417|ref|YP_002304353.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
 gi|212219453|ref|YP_002306240.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
 gi|29540670|gb|AAO89614.1| outer membrane protein [Coxiella burnetii RSA 493]
 gi|120575507|gb|EAX32131.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
 gi|154356552|gb|ABS78014.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
 gi|161762805|gb|ABX78447.1| putative lipoprotein [Coxiella burnetii RSA 331]
 gi|165916651|gb|EDR35255.1| putative lipoprotein [Coxiella burnetii RSA 334]
 gi|212011827|gb|ACJ19208.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
 gi|212013715|gb|ACJ21095.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
          Length = 186

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 18/114 (15%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI---------RGHTDASPFRNIARDNWR 286
            F   ++    + I  L+ I   L +      +          G   +  +R     N  
Sbjct: 79  FFLPQTTTVKEKHIETLRLIALYLHNYKRTHIVHYPIKVYAFSGTVHSRRYR-DYESNQY 137

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338
                A      L   G S  ++  + GF       +  +   N+ NRR+ I V
Sbjct: 138 -----AQVIGSFLWNHGFSPAQL-SVVGFGAKHPIASYRTPEGNAFNRRVMIQV 185


>gi|89074015|ref|ZP_01160516.1| Outer membrane protein, putative [Photobacterium sp. SKA34]
 gi|89050153|gb|EAR55664.1| Outer membrane protein, putative [Photobacterium sp. SKA34]
          Length = 202

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +       T  F+        +      ++ ++L    +   I      +        N 
Sbjct: 68  VKPKYDIQTVYFNFDDDHIRLDQNETYTQLYDLLKQKPQAKVIL--VGDTSPEGTNEYNK 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R       L+++G++ +RIS+
Sbjct: 126 ALAQRRTGVIKDALIENGIAPERISE 151


>gi|163939964|ref|YP_001644848.1| Excalibur domain-containing protein [Bacillus weihenstephanensis
           KBAB4]
 gi|163862161|gb|ABY43220.1| Excalibur domain protein [Bacillus weihenstephanensis KBAB4]
          Length = 334

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 55/198 (27%), Gaps = 9/198 (4%)

Query: 44  LMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100
           L  FFLV+ I++         K+ I          ++    G   E+             
Sbjct: 73  LFIFFLVLAILSVIKQTGVAKKQFIITAILFVIFVVLLGISGPSSEKTTATNKQVASNSE 132

Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ------SEHCKNSLTRDSEKG 154
              +   K  V+ K      +KQ +  +      +  Q+       E  +          
Sbjct: 133 EKKDDEKKKEVEKKEADEKARKQQEDEKRQAEEQALKQEDEKRLADEQARKQQEEQKRLA 192

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
            +  +    E+    +E        +++    + +K+ ++  ++          +   + 
Sbjct: 193 DEQARKQQEEQKRLADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKRQA 252

Query: 215 VLFETTRTGILISIIDQR 232
                 +        D++
Sbjct: 253 DEQARKQQEEQKRQADEQ 270


>gi|269968904|ref|ZP_06182876.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269826484|gb|EEZ80846.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 221

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F            + L ++  +L  +     +    D SP  ++   N  L+  R  +
Sbjct: 91  FFFAMDEHQVTSSHDMPLSELKALLQSNPN-AQVILIGDTSPEASLE-YNKALAKKRTAA 148

Query: 295 AYQVLMKSGVSEDRISKISGF 315
             ++L+++G+ ++RI +   +
Sbjct: 149 IRKLLVRNGIQDNRIEEQEFY 169


>gi|269123996|ref|YP_003306573.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268315322|gb|ACZ01696.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 1411

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 10/97 (10%)

Query: 226  ISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIA 281
            I + +     +  +             +L+ I   L  + +     I G+TD     +  
Sbjct: 1294 IKMNEDDLYTLDGYRLGIHELTKSQEEMLKNIVRELNENYKNRKIYITGYTDNV---SGE 1350

Query: 282  RDNWRLSLDRAYSAYQVLMKSGVSED---RISKISGF 315
              N  L L RA    + L + G+      R    SG+
Sbjct: 1351 NLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGY 1387


>gi|294140321|ref|YP_003556299.1| hypothetical protein SVI_1550 [Shewanella violacea DSS12]
 gi|293326790|dbj|BAJ01521.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 264

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278
            ++  +  S   +R    FD             L         + + I +  + D +   
Sbjct: 116 QSKPELQPSPYLKRLQLFFDLDQDQLNISETQRLTVWLSQFKSNPDRIELHAYADET--- 172

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSANRRIDIL 337
                N  LS  R+ +  Q L +  +    +  +           +       +R +++L
Sbjct: 173 GSQEYNKSLSHRRSQAISQCLQRLAIKPKELL-VIYHGERVSFSQAQQLPRQRDRLVELL 231

Query: 338 V 338
           V
Sbjct: 232 V 232


>gi|253723681|ref|YP_003023967.1| putative outer membrane protein [Photobacterium damselae subsp.
           piscicida]
 gi|251752745|dbj|BAH83618.1| putative outer membrane protein [Photobacterium damselae subsp.
           piscicida]
          Length = 150

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
            ++ +  +  F +SS+   P  +  +     +      +I+I G T  +       +   
Sbjct: 38  EVVSRTVSVSFGESSTRFRPGPVAKVMLETAL---DASMITINGRTSTNKPSKRDEN--- 91

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336
           L+L RA SA   L+  GVS  +I  I+  +       +        N+R+DI
Sbjct: 92  LALARAVSARNYLVAQGVSPLKIM-INYVSADDYLTENWTPEGRRINQRVDI 142


>gi|327403731|ref|YP_004344569.1| hypothetical protein Fluta_1740 [Fluviicola taffensis DSM 16823]
 gi|327319239|gb|AEA43731.1| hypothetical protein Fluta_1740 [Fluviicola taffensis DSM 16823]
          Length = 529

 Score = 43.0 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 24/119 (20%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285
           +   +  +  F   S      +   L+KI   L  +    I   G++D+         N 
Sbjct: 18  TYSQETQSVYFKTGSHKISTYSNKTLEKIFTNLDCTELIEIKFIGYSDSI---GNIDSNQ 74

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGF-AHHRLKIASDPMN------SANRRIDIL 337
           +LS  RA +  +              + G+ +     +            S +RR+D++
Sbjct: 75  KLSEKRARAVAK-------------SVKGYLSSTISIVTESKGELPRKVDSLSRRVDVV 120


>gi|45656163|ref|YP_000249.1| hypothetical protein LIC10258 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599396|gb|AAS68886.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 589

 Score = 43.0 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 36/137 (26%), Gaps = 16/137 (11%)

Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263
           S          +L       + ISI + +                   L      L +  
Sbjct: 465 SNGKGAEFKTTILVLEEDHSLRISIPESQVEA------------RWWSLPGKIRSLLNEF 512

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
               I   + +S  +     N   + +RA  A +      V   RI    G+      I 
Sbjct: 513 PGYKIELQSHSSH-QGDEEVNQVGTEERAREALEYFFSKTVPFGRIH-FRGYGETLPLIP 570

Query: 324 SDP--MNSANRRIDILV 338
                    N+RID  +
Sbjct: 571 GSGKYEADKNQRIDFYL 587


>gi|302039308|ref|YP_003799630.1| hypothetical protein NIDE4036 [Candidatus Nitrospira defluvii]
 gi|300607372|emb|CBK43705.1| conserved protein of unknown function [Candidatus Nitrospira
           defluvii]
          Length = 250

 Score = 43.0 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 46/175 (26%), Gaps = 23/175 (13%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
              +K  +     I   L        +      +    + I + +      F+       
Sbjct: 57  APERKVARATTDDIKGLLRDHFQRFDLSLDADSSDPHVVRIVVPEALLN--FEFGKGALS 114

Query: 246 PETIVVLQKIGEV--------LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY- 296
                 L              +    + + I GHTD          N +LS +R+ +   
Sbjct: 115 SAADRFLADAMPTYAALLCGAMRDQIDSLVIEGHTDDR---GTDIYNLKLSQERSLNVMV 171

Query: 297 --QVLMKSGVS-EDRI----SKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342
               ++K       R     +  SG     L +     P    +RR+   +  R 
Sbjct: 172 KGLEVIKDSAPWAYRCFHEKTSASGRGRQDLVMDESRGPDRDKSRRVVFKIRLRP 226


>gi|153870593|ref|ZP_01999962.1| hypothetical protein BGP_3582 [Beggiatoa sp. PS]
 gi|152072944|gb|EDN70041.1| hypothetical protein BGP_3582 [Beggiatoa sp. PS]
          Length = 322

 Score = 42.6 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 10/88 (11%)

Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHH--R 319
             + + GH D    ++    N+R+S +RA+   Q+LM  G  V       ++GFA +  +
Sbjct: 222 MQVVVEGHADYKRSKHDKLINYRVSKERAFKVMQLLMDEGGIVPPKYKMSMAGFAEYGRQ 281

Query: 320 LKIASDPM------NSANRRIDILVEDR 341
            K+               RR+ I +   
Sbjct: 282 PKLNEQEKQDEQQIRRRMRRVTISIVPD 309


>gi|322436170|ref|YP_004218382.1| hypothetical protein AciX9_2576 [Acidobacterium sp. MP5ACTX9]
 gi|321163897|gb|ADW69602.1| hypothetical protein AciX9_2576 [Acidobacterium sp. MP5ACTX9]
          Length = 227

 Score = 42.6 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 24/167 (14%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           ++++R + +  K+ S L   + +  +     +     ++I + +      F+   S    
Sbjct: 35  EQEERQESVKDKLLSELQQQLKEANLDQQNIKKDGDAVVIIVPEGLMN--FETGKSDLKD 92

Query: 247 ETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI-----ARDNWRLSLDRAY 293
                L K    ++           + + + G+TD               N  LS +R+ 
Sbjct: 93  GGKAFLAKYIPPISKMLVSDFRNDVDSLIVEGYTDRQRAAGSSEEQGEAQNLILSQERSM 152

Query: 294 SAYQVLMKSGVSEDRI---------SKISGFAHHRLKIASDPMNSAN 331
              +  ++     D I            SG    +      P N+ N
Sbjct: 153 KVVEESLRDLSGPDHIPEREFFLDRLSASGRGEQQAIHQGGPENNPN 199


>gi|289676831|ref|ZP_06497721.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
          Length = 144

 Score = 42.6 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                + I GH D          N ++S +RA S   +   SG+  +R+S+  G      
Sbjct: 85  DQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMP 140

Query: 321 KIA 323
           + A
Sbjct: 141 RAA 143


>gi|222823652|ref|YP_002575226.1| hypothetical protein Cla_0646 [Campylobacter lari RM2100]
 gi|222538874|gb|ACM63975.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 350

 Score = 42.6 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 91/295 (30%), Gaps = 20/295 (6%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
           N +D+   +A +    P  + + T +    DE    +  +      + +    + S +  
Sbjct: 59  NISDNTYYQAQQTNQEPLKEEISTQNNPAIDENTSSQEVAPTTQINTAEVSENEVSENEI 118

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQS----EHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
                 +++ +    N   ++  ++     +          +  +   + +D    +   
Sbjct: 119 TTPKITQEKQEAPVENNKQINIKKEKTTKYKSTMQEYIAKGKTSRYEPRLSDDFVKVYVL 178

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV------KGVLFETTRTGI 224
           +   L     + +  M    +       ++  +  L  DN+         V  +  +   
Sbjct: 179 DGKSLSDYRIDMLKEMINPVKANSQDYNLTIFIDMLSNDNMKLSIYNKDIVFAKNKKKYN 238

Query: 225 LISIIDQRNTPMFDK-SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283
            + +       +F++   S    E ++             + I I+G+ D          
Sbjct: 239 YVDVKISDLKFLFERNGYSEYSNENLLEKINQNLAREDIIKRIKIQGYADDR---GSTFA 295

Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA-HHRL-KIASDPMNSANRRIDI 336
           N+ + L+RA +  +           + +I          K  SD     NR+++I
Sbjct: 296 NYMIGLNRAMNVAKHFFSF----TEVIEIESLGKDTYPTKDKSDSQRQNNRKVEI 346


>gi|228907904|ref|ZP_04071756.1| Excalibur domain protein [Bacillus thuringiensis IBL 200]
 gi|228851799|gb|EEM96601.1| Excalibur domain protein [Bacillus thuringiensis IBL 200]
          Length = 318

 Score = 42.6 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/217 (11%), Positives = 61/217 (28%), Gaps = 8/217 (3%)

Query: 37  YADFMTVLMAFFLVMWIINATDD---DTKKAIEQY-----FNPFGKNLMTASKGIFDEQN 88
           +A    +L  FFLV+ I++         K+ I        F         +S+       
Sbjct: 68  FAILSFILFIFFLVLAILSVIKKTGVSKKQFIITAVLFVIFVALLGISAPSSEKTTATST 127

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
               +++ + D    + + K   D K      +K+    +         Q  E  +    
Sbjct: 128 KVASNNEEQKDSEKKKELEKKEADEKTQKQEDEKRQAEEQARKQEDEKRQADEQARKQQE 187

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208
                  +  +    E+    +E        +++    + +K+  +  ++          
Sbjct: 188 EQKRLADEQVRKQQDEQKRQADEQARKQQDEQKRQADEQARKQQDEQKRQADEQARKQQE 247

Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
           +   +       +     +   Q      + SS+   
Sbjct: 248 EQKRQADEQARKQQEEQKAQQTQTQPTSGNTSSAYYK 284


>gi|254490462|ref|ZP_05103648.1| hypothetical protein MDMS009_794 [Methylophaga thiooxidans DMS010]
 gi|224464206|gb|EEF80469.1| hypothetical protein MDMS009_794 [Methylophaga thiooxydans DMS010]
          Length = 212

 Score = 42.6 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 21/164 (12%)

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255
            +   +    L ++   + V ++ +     +S        +FD   S    E   +L   
Sbjct: 34  QQNQVAIYDALNSEFSHELVSWKASVDKETLSFQFNSPEVLFDSGDSNLKSEFEEILITF 93

Query: 256 G-------EVLAHSTEVISIRGHTDA-----SPFRNIARDNWRLSLDRAYSAYQVL-MKS 302
                   E    S + + I GHT +     +P       N  LS +R  S        +
Sbjct: 94  IPRYLSVLEKFKDSIDEVRIEGHTSSEWGNDTPPDAAYFLNMALSQNRTRSVLNFAYQDT 153

Query: 303 GVSED------RISKISGFAHHRLK--IASDPMNSANRRIDILV 338
           G+S++      +     G A  + K  I        +RR+   V
Sbjct: 154 GLSKNEQNWVKKTFSAVGLASAKAKLNIDGSENKELSRRVSFRV 197


>gi|90581643|ref|ZP_01237433.1| outer membrane protein [Vibrio angustum S14]
 gi|90437173|gb|EAS62374.1| outer membrane protein [Vibrio angustum S14]
          Length = 202

 Score = 42.6 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +       T  F+        +      K+ ++L    +   I      +        N 
Sbjct: 68  VKPKYDIQTVYFNFDDDHIRLDQNETYTKLFDLLKQKPQAKVIL--VGDTSPEGTNEYNK 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R       L+++G++ +RIS+
Sbjct: 126 ALAQRRTGVIKDALIENGIAPERISE 151


>gi|256396052|ref|YP_003117616.1| hypothetical protein Caci_6944 [Catenulispora acidiphila DSM 44928]
 gi|256362278|gb|ACU75775.1| hypothetical protein Caci_6944 [Catenulispora acidiphila DSM 44928]
          Length = 420

 Score = 42.6 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 3/85 (3%)

Query: 227 SIIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           ++     T  F+  ++           L      +       +I      +         
Sbjct: 294 TVFADSGTVGFEPDTTQFRDPAAAHTTLANYAATVKPYLPGATIEV-VGTTATWGDEAGR 352

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRI 309
            +LS +RA +    L+  G+    +
Sbjct: 353 LKLSAERAQAVVDELVTLGIPRANL 377


>gi|317504755|ref|ZP_07962715.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606]
 gi|315664137|gb|EFV03844.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606]
          Length = 390

 Score = 42.6 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            +   + +        +      + K   D   ++   L+    +++    + E   T I
Sbjct: 230 WNKTPDTDALKAMTQSQIDDLNNKIKNASDEGDRLRKELAEAPKEDVQSKSIKELVATPI 289

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
            +     +        + +   + +V ++ + +    +   + + G+ D+         N
Sbjct: 290 SVFFNINK--------TELARLKDLVNVRALAKYAVENNNRVLVTGYADS--ATGTPSIN 339

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
            +LS  RA +    L+K G+    IS  +
Sbjct: 340 QKLSEGRANTLVNELVKMGIKRSNISVAA 368


>gi|239994764|ref|ZP_04715288.1| OmpA/MotB [Alteromonas macleodii ATCC 27126]
          Length = 588

 Score = 42.6 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 13/96 (13%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---------VISIRGHTDASPFRNIA 281
                +F  +        +  L+ +   +               I + G +D       +
Sbjct: 474 SSQNVLFATNQEALSEVQLAKLEPLANDIKQLLTLADKTKTVVSIVVMGASDN---SGSS 530

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             N  LS  RA +    L+  GV  D +  +S    
Sbjct: 531 ARNRALSQKRAENVVNSLISLGVESDILIPVS-LGE 565


>gi|254787370|ref|YP_003074799.1| phosphate binding family protein [Teredinibacter turnerae T7901]
 gi|237685918|gb|ACR13182.1| phosphate binding family protein [Teredinibacter turnerae T7901]
          Length = 464

 Score = 42.6 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F    +    + +  + ++ + +         + + G ++     N A     LS  RA 
Sbjct: 347 FQPGKANLDNKALHDISRLVDYVKSLPGEPLHVQLVGFSNPEDSDNRAD---VLSKLRAS 403

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVEDRQ 342
                L ++G++   I    GF    L    +   ++ N R+++ + +  
Sbjct: 404 KVKIELFRNGLTTAPIM---GFGSDVLVANDNGNTSAKNERVEVWLFNPN 450


>gi|206972147|ref|ZP_03233095.1| excalibur domain protein [Bacillus cereus AH1134]
 gi|206733070|gb|EDZ50244.1| excalibur domain protein [Bacillus cereus AH1134]
          Length = 302

 Score = 42.6 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 51/176 (28%), Gaps = 11/176 (6%)

Query: 40  FMTV---LMAFFLVMWIINATDD---DTKKAIEQY-----FNPFGKNLMTASKGIFDEQN 88
           F T+   L  FFLV+ I++         K+ I        F         +S+       
Sbjct: 66  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALLGISAPSSEKTTATST 125

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
               +++   D    + + K   D K      +K+    +            E  +    
Sbjct: 126 KVASNNEEPKDSEQKKELEKKEADEKTQKQEDEKRLAEEQARKQEDEKRLADEQARKQQE 185

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204
                  +  +    E+    +E        ++++   + +K+ ++  +       
Sbjct: 186 EQKRLADEQARKQQEEQKRLADEQARKQQEEQKRLADEQARKQQEEQKRLADEQAR 241


>gi|302345853|ref|YP_003814206.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302149368|gb|ADK95630.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 362

 Score = 42.6 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 11/131 (8%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII-DQRNTPMFDKSSSIPL 245
           +    +  L  ++++    +V +  V   + +        ++  D      F +      
Sbjct: 228 QLNDEINSLRDQLNAKPKEVVKEVEVVKEVIKEVPAQTTQTLCIDNLVFVTFAQGKYFLT 287

Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-- 303
            E    L  +          + I G    +        N RLS +RA    + L   G  
Sbjct: 288 NEAKKALDDVKA-----GRHVQIVG---TASPEGPKALNDRLSQNRADVVAKYLQNRGVI 339

Query: 304 VSEDRISKISG 314
           V E +   + G
Sbjct: 340 VDEAKGQGVQG 350


>gi|75908071|ref|YP_322367.1| hypothetical protein Ava_1850 [Anabaena variabilis ATCC 29413]
 gi|75701796|gb|ABA21472.1| hypothetical protein Ava_1850 [Anabaena variabilis ATCC 29413]
          Length = 215

 Score = 42.6 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVL------QKIGEVLAHSTEVISIRGHTDASPFRN 279
           I +I       F   S+   P+ +V +      +       ++  V+ I GHTD  P  N
Sbjct: 56  IILIKDEGAYRFASGSAEIPPKMLVYILRRIVPEIEARTKQYNINVVEIIGHTDGQPNGN 115

Query: 280 ----------------------IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS--KISGF 315
                                  A  N  L L RA +  +VL      + ++S     G+
Sbjct: 116 VVSNLDQNLEKVVNGELPIVNLRAGSNADLGLMRALAVVKVLRDVQRKQGKLSKLSFRGY 175

Query: 316 AHHRLKIASDPMNS--------ANRRIDILVED 340
           +  ++ + S  + +          RRI+I    
Sbjct: 176 SAAQMILPSGEVAAIARQDDQTR-RRIEIRFTR 207


>gi|332559645|ref|ZP_08413967.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|332277357|gb|EGJ22672.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 512

 Score = 42.3 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 26/240 (10%), Positives = 66/240 (27%), Gaps = 16/240 (6%)

Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
                    ++        +  + + +   S           ++          +  +  
Sbjct: 276 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 335

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224
            S   +           +   +      Q L   I      +  D + +          +
Sbjct: 336 SSAPAQAAVAEAGFVDRRPSRVPLASDGQRLMNAIRIAGDEVPLDEVKRLTDLMAGADRL 395

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281
            I+         F++ +    P++   L ++ ++L       + + + G +D       A
Sbjct: 396 SITFR-------FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLVGFSDGR---GPA 445

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           R N  LS +    A    ++  V E     + GF           +     NRR+++ + 
Sbjct: 446 RANLDLSRE-RAEAVAAALREAVPELGPPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 504


>gi|330883886|gb|EGH18035.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 27

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVL 44
          + +++ A +   +    W + YADF+T+L
Sbjct: 1  MARRRQAEEHENH--ERWLVSYADFITLL 27


>gi|332885182|gb|EGK05433.1| hypothetical protein HMPREF9456_02634 [Dysgonomonas mossii DSM
           22836]
          Length = 487

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTD 273
           V     R     + I  R   + D  ++    + +  +    +          SI G+  
Sbjct: 188 VKARKDRHTATFNYIVDRYELLRDFGNNQSEFDQVDRVIGEIQNNNDLQITEFSIAGYAS 247

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317
                     N  LS +RA S    L+   G++ ++   + GF  
Sbjct: 248 PE---GGFEHNKVLSENRANSFADYLVTKFGITRNKF-TVEGFGE 288


>gi|307564850|ref|ZP_07627377.1| conserved domain protein [Prevotella amnii CRIS 21A-A]
 gi|307346440|gb|EFN91750.1| conserved domain protein [Prevotella amnii CRIS 21A-A]
          Length = 405

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 226 ISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284
           I+  D      F ++S+     +  + +++I   +      + I G  D+      ++ N
Sbjct: 295 IAKFDAPILFFFKRNSTELIDKQQFINIREIAAAIKEYDLDVRIVGSADSK--TGTSKHN 352

Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
             LS+ R     ++L+K+GV+ D+++     G ++++   A+
Sbjct: 353 RILSIKRCRYIAKLLLKAGVTRDKMTASIKGGNSYYKPYTAN 394


>gi|218129995|ref|ZP_03458799.1| hypothetical protein BACEGG_01578 [Bacteroides eggerthii DSM 20697]
 gi|217987853|gb|EEC54179.1| hypothetical protein BACEGG_01578 [Bacteroides eggerthii DSM 20697]
          Length = 366

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 12/139 (8%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
           +E        K     A  +   L+              T     L       +   F +
Sbjct: 217 READDNAAALKNANQKAADLEKALNDCKNQAPKVITETVTNNKKTL------ESVVTFRQ 270

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
             +         +++I   L +     +SI+G+         A  N R++  RA S   +
Sbjct: 271 GGTSVESSQTPNVERIATYLKNHKNATVSIKGYASPE---GNADVNARIAKQRAESVKNM 327

Query: 299 LM-KSGVSEDRISKISGFA 316
           L+ +  ++ +RI+   G  
Sbjct: 328 LINRYKIAANRITA-EGQG 345


>gi|255690354|ref|ZP_05414029.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
 gi|260624159|gb|EEX47030.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
          Length = 377

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 79/259 (30%), Gaps = 14/259 (5%)

Query: 65  IEQYFNPFGKNLMTASKGIF-DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123
              Y+       +    G+            +N I   +  +   N  + K  +   K  
Sbjct: 105 FAGYWGTPRLFEIETVAGLGWLHYAQNGNGDRNSISSKLGLNFNFNLGEAKAWTIGIKPA 164

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE-- 181
                N     +    +      +T   +                  +   +  L+++  
Sbjct: 165 LVYDLNACGERNVGFNANRAAWEITAGLKYHFRCSNGKHHISFAKLYDQAEVDALNEQVN 224

Query: 182 --KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +   + ++  L    ++ +     L        V+   T T    ++    +   F +
Sbjct: 225 NLRQTNVDQEAELTAANQRNAELEQQLADCKNQGPVIVTDTITSHKKTL---ESVVTFRQ 281

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
                +      +++I   L +  +  +SI+G+         A  N R++  RA +   +
Sbjct: 282 GGVSVVASQTPNVERIATYLKNHEKATVSIKGYASPE---GKAEVNARIAQQRADAVKSL 338

Query: 299 LMKS-GVSEDRISKISGFA 316
           L+K   ++E+RI+   G  
Sbjct: 339 LVKRYKIAENRITA-EGQG 356


>gi|300311129|ref|YP_003775221.1| hypothetical protein Hsero_1803 [Herbaspirillum seropedicae SmR1]
 gi|300073914|gb|ADJ63313.1| hypothetical protein Hsero_1803 [Herbaspirillum seropedicae SmR1]
          Length = 257

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 17/200 (8%)

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            + +  +L +         Q     ++            ++    +   + E       +
Sbjct: 43  AQMKVSKLISQGHVQVVGAQKASQTDAQATPESSSTQAAETPGEREKAQEIEQLKREVAT 102

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +  LA    +      +  ++  S        +    +    G+ I   ++  T  FD 
Sbjct: 103 LKAKLAAPPLQSDAGSLRSAAAPSSPNAIQVKAEP-SDKEVAPGLRIDANEKAVTLNFDV 161

Query: 240 SSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA--- 292
            S+    E    L             S   I I G        + A      S  RA   
Sbjct: 162 DSTQLSEEGGKALDKSIGDWVRRAKSSQGKIVITG-----VIGSGAYSE---SRRRAYYR 213

Query: 293 -YSAYQVLMKSGVSEDRISK 311
             +    L+ +GV ++R+  
Sbjct: 214 TVAVRNYLIDAGVDKERVVS 233


>gi|218264130|ref|ZP_03478022.1| hypothetical protein PRABACTJOHN_03712 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222248|gb|EEC94898.1| hypothetical protein PRABACTJOHN_03712 [Parabacteroides johnsonii
           DSM 18315]
          Length = 487

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 61/213 (28%), Gaps = 15/213 (7%)

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           + + L +   +L +     +    +   S       +  +         +      + + 
Sbjct: 278 EVEGLLDTYAHLFDDDSLNNDGYPVNNYSGLNSLRARLKNRRWDGKSVFDGQPSNGNTQA 337

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
           + A    K +QD             AD+     +         I          F+  ++
Sbjct: 338 LAAQDIPKSVQDSVPDSGKGKYVNPADSTSTEYIALMQSGNECI---GSPIYFFFELGTA 394

Query: 243 IPLPETI-VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
                +  + L ++  V       +++ G  D+         N  LS  RA      L K
Sbjct: 395 RLTDVSQLINLDELARVAKKYGLSVAVIGAADS--ATGTVDINDTLSALRADYIATELNK 452

Query: 302 SGVSEDRIS--KISGFAHHRLKIASDPMNSANR 332
            G+  + I+   + G + +           ANR
Sbjct: 453 RGLPAENITKNAMGGISDYSP-------EKANR 478


>gi|319641619|ref|ZP_07996304.1| OmpA family protein [Bacteroides sp. 3_1_40A]
 gi|317386771|gb|EFV67665.1| OmpA family protein [Bacteroides sp. 3_1_40A]
          Length = 482

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292
              F  +S   + E+ +V       ++      ++I G  D+         N  L+  RA
Sbjct: 382 YFFFQLNSDRLVDESQIVNLDDIAKISKVHNLKVTIFGAADS--ATGTQTINQELAQRRA 439

Query: 293 YSAYQVLMKSGVSEDRI 309
               Q+L+  GVSE  I
Sbjct: 440 RYIAQMLVDKGVSESLI 456


>gi|313158190|gb|EFR57594.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 389

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 3/137 (2%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
             P + +    + R +RL++    ++S  + L  +N  + +     +      +      
Sbjct: 232 SKPQAVDFTPYLDRIRRLEENNNDLASKNTALSDEN--EKLRNMPPKVVAEKKVAASPVA 289

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F    +    + +  L+        + +  +      A         N RLS  R   
Sbjct: 290 LFFKIGRATLDSKELTNLEFYVRNAMKADKEKTFTLIGSADKATGSKELNQRLSEQRMEY 349

Query: 295 AYQVLM-KSGVSEDRIS 310
            Y +L  K G++ +R+ 
Sbjct: 350 VYDLLKNKYGIAPERLI 366


>gi|440895|gb|AAB28583.1| OmpA=39 kda outer membrane protein [Proteus mirabilis, Peptide
           Partial, 34 aa, segment 5 of 6]
          Length = 34

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 3/35 (8%)

Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           + G+T+          N  LS  RA S    L+  
Sbjct: 3   VIGYTNRI---GSQDYNLPLSEKRAQSVVNYLVSK 34


>gi|317474001|ref|ZP_07933280.1| hypothetical protein HMPREF1016_00258 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909843|gb|EFV31518.1| hypothetical protein HMPREF1016_00258 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 492

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 237 FDKSSSIPLPETIVVLQ-----KIGEVLAHSTEVISIRGH--TDASPFRNIARDNWRLSL 289
           F + S    P+     Q     +    +      ++I G   T  +     A  N +LS 
Sbjct: 202 FRQDSHKIDPKFQNNRQELDSVRHSIAMVKDNGDLTITGIYVTGYASPEGRADYNEKLSQ 261

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAH 317
            RA +  + + +    + R+  ++    
Sbjct: 262 RRAEAFMRYVQRETEVDTRLWHVAWRGE 289


>gi|319945475|ref|ZP_08019735.1| hypothetical protein HMPREF0551_2584 [Lautropia mirabilis ATCC
          51599]
 gi|319741261|gb|EFV93688.1| hypothetical protein HMPREF0551_2584 [Lautropia mirabilis ATCC
          51599]
          Length = 236

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62
                      W I +AD MT LM  FLV+  +       K
Sbjct: 9  NRSRRDEAEKPFW-ISFADMMTALMVLFLVVMSVALLAVTKK 49


>gi|229515161|ref|ZP_04404621.1| hypothetical protein VCB_002818 [Vibrio cholerae TMA 21]
 gi|229529201|ref|ZP_04418591.1| hypothetical protein VCG_002294 [Vibrio cholerae 12129(1)]
 gi|229332975|gb|EEN98461.1| hypothetical protein VCG_002294 [Vibrio cholerae 12129(1)]
 gi|229347866|gb|EEO12825.1| hypothetical protein VCB_002818 [Vibrio cholerae TMA 21]
          Length = 268

 Score = 42.3 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +      + +  L ++ + L +   E ++I G  D+       + N  L+  RA S
Sbjct: 164 LFPVNQYQLTNKGVNTLFEVIDKLKYLPVEELTIYGIADS---SGTYQKNRVLADRRAQS 220

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 221 VKTFLVEEGLS 231


>gi|254285285|ref|ZP_04960250.1| hypothetical protein A33_1680 [Vibrio cholerae AM-19226]
 gi|150424557|gb|EDN16493.1| hypothetical protein A33_1680 [Vibrio cholerae AM-19226]
          Length = 255

 Score = 42.3 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +      + +  L ++ + L +   E ++I G  D+       + N  L+  RA S
Sbjct: 151 LFPVNQYQLTNKGVNTLFEVIDKLKYLPVEELTIYGIADS---SGTYQKNRVLADRRAQS 207

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 208 VKTFLVEEGLS 218


>gi|254224927|ref|ZP_04918542.1| hypothetical protein VCV51_1214 [Vibrio cholerae V51]
 gi|125622615|gb|EAZ50934.1| hypothetical protein VCV51_1214 [Vibrio cholerae V51]
          Length = 268

 Score = 42.3 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +      + +  L ++ + L +   E ++I G  D+       + N  L+  RA S
Sbjct: 164 LFPVNQYQLTNKGVNTLFEVIDKLKYLPVEELTIYGIADS---SGTYQKNRVLADRRAQS 220

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 221 VKTFLVEEGLS 231


>gi|71480618|gb|AAZ32240.1| NT01VC2338 [Vibrio cholerae non-O1/non-O139]
          Length = 268

 Score = 42.3 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  +      + +  L ++ + L +   E ++I G  D+       + N  L+  RA S
Sbjct: 164 LFPVNQYQLTNKGVNTLFEVIDKLKYLPVEELTIYGIADS---SGTYQKNRVLADRRAQS 220

Query: 295 AYQVLMKSGVS 305
               L++ G+S
Sbjct: 221 VKTFLVEEGLS 231


>gi|325268787|ref|ZP_08135413.1| hypothetical protein HMPREF9141_0622 [Prevotella multiformis DSM
           16608]
 gi|324988892|gb|EGC20849.1| hypothetical protein HMPREF9141_0622 [Prevotella multiformis DSM
           16608]
          Length = 360

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246
           +    +  L  ++++    +V + + + +    T T   IS+ D      F +   I   
Sbjct: 228 ELNDEINSLRDQLNAKPKEVVKEVVKEVIKEVPTTTTQTISV-DNLVFVTFQQGKYILTA 286

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
                L  I          + I G    +        N RLS +RA    + L   G+
Sbjct: 287 PNKKALDSIKA-----GRHVQIVG---TASPEGSKAFNDRLSQNRANVVAEYLQGRGI 336


>gi|212695185|ref|ZP_03303313.1| hypothetical protein BACDOR_04723 [Bacteroides dorei DSM 17855]
 gi|319641386|ref|ZP_07996079.1| hypothetical protein HMPREF9011_01676 [Bacteroides sp. 3_1_40A]
 gi|212662271|gb|EEB22845.1| hypothetical protein BACDOR_04723 [Bacteroides dorei DSM 17855]
 gi|317387001|gb|EFV67887.1| hypothetical protein HMPREF9011_01676 [Bacteroides sp. 3_1_40A]
          Length = 380

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 55/162 (33%), Gaps = 8/162 (4%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL--VADNIVKGVLFE 218
           ++        + Y    + +        + +L D   ++++ +     +   +       
Sbjct: 203 SNGTHHFTTMKPYDPVEIGELNDAVNNLRSQLNDKDMQLNNAMQQANNLQRELADCRTQA 262

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
                ++ +     +   F +  S+     +  ++++   +    E  + I+G+      
Sbjct: 263 ANIETVVKTNRIPESIITFRQGKSVVDASQLPNVERVATYMKKHPEARVIIKGYASPE-- 320

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK-ISGFAH 317
                 N +L+  RA S   +L+K   +S+ RI+    G   
Sbjct: 321 -GNLAFNKKLANARAESVKTILVKRYKISDTRITAEGQGIGD 361


>gi|220921474|ref|YP_002496775.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219946080|gb|ACL56472.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
          Length = 612

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 30/122 (24%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD---------------- 273
           +  T  F   S+    +    L  +  +        I + GH D                
Sbjct: 486 EPRTVRFAPGSADLQADFYPTLDDLATLARTCPGARIEVAGHDDPPGTVPPAKPPAPKPS 545

Query: 274 -------------ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320
                        A P       +  L   RA +    L+K+GV  DR++ +SG A  R 
Sbjct: 546 APKPAKSAKGKAKAEPVPEPEMPDVTLPQRRAAAIVDYLLKAGVPADRVAAVSGDAQRRA 605

Query: 321 KI 322
             
Sbjct: 606 VA 607


>gi|262193349|ref|YP_003264558.1| hypothetical protein Hoch_0023 [Haliangium ochraceum DSM 14365]
 gi|262076696|gb|ACY12665.1| hypothetical protein Hoch_0023 [Haliangium ochraceum DSM 14365]
          Length = 2233

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 9/63 (14%)

Query: 286 RLSL-----DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
           RLS       +A     +L ++GV+ DRI+   G      +       + +RR+ I V  
Sbjct: 677 RLSALVATTRQAELVATLLAEAGVARDRITA-RGRGSLEPRGD---GAADDRRVVITVTA 732

Query: 341 RQG 343
             G
Sbjct: 733 EGG 735


>gi|148240451|ref|YP_001225838.1| hypothetical protein SynWH7803_2115 [Synechococcus sp. WH 7803]
 gi|147848990|emb|CAK24541.1| Uncharacterized secreted protein [Synechococcus sp. WH 7803]
          Length = 208

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 49/184 (26%), Gaps = 43/184 (23%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           +   ++STL  L     V  +L        +I + D      FD  S +        L++
Sbjct: 19  MTDMLASTLMILCLFLAVSTILRAMNAKPPVIKLADTDAYR-FDTGSFLLSTTFKETLRE 77

Query: 255 IGEVLAHSTEVIS------IRGHTDASPFR---------NIARD-----------NWRLS 288
                   T          I GHTD  P                           N  L 
Sbjct: 78  NAVPQISRTIHCYGIDTVEIIGHTDGRPGGMVGNLDYSLGSFSSGSDMQEMVPGSNIDLG 137

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGF------------AHHRLKIASDPMNSANRRIDI 336
           L RA S    L  S     RI++  GF                    +    S  RRI+I
Sbjct: 138 LLRAISVKTELEFS--LSRRITQDVGFRVLSAGSTIGPDGSFLP-AKNLDEGSR-RRIEI 193

Query: 337 LVED 340
               
Sbjct: 194 RFLR 197


>gi|60681117|ref|YP_211261.1| hypothetical protein BF1621 [Bacteroides fragilis NCTC 9343]
 gi|60492551|emb|CAH07322.1| conserved hypothetical exported protein [Bacteroides fragilis NCTC
           9343]
          Length = 482

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/285 (8%), Positives = 75/285 (26%), Gaps = 24/285 (8%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L+A  +VM                  +         S  +  + +    +   +  L++ 
Sbjct: 9   LLALAVVM----PASAQKFFKDAISLSDVSLWQQGNSLYVDMKIDMKNLTVSPERMLTLT 64

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T    ++ +       + ++         + +          +            + 
Sbjct: 65  PLLTDGQHNVALEEIIINGKRRQKAYLRGLAISRELPAGIVIPYNKREVLNYAQVIPYEP 124

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +                   + ++    D++ +     +      ++  V +      
Sbjct: 125 WMANASLNLVENLCGCGNNEEMLAQELITNDVSTEAKRLSA------MIPVVAYIQPTVE 178

Query: 224 ILISIIDQRNTPM-FDKSSSIPLPETIVV---LQKIGEVLAHSTEVIS-------IRGHT 272
           ++ +  +Q    + F  S ++  PE +     L  I  +        +       I G  
Sbjct: 179 VVKNRSEQYEAHLDFPVSKAVIQPEFMNNHKELMNIHAMFDKIQNDKNLTVTGISIEGFA 238

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N +LS  RA +    L  +     ++ K++    
Sbjct: 239 SPE---GPLKFNEQLSQKRAEALKNYLTTNEKVPGKLYKVTFGGE 280


>gi|53712899|ref|YP_098891.1| hypothetical protein BF1609 [Bacteroides fragilis YCH46]
 gi|52215764|dbj|BAD48357.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|301162605|emb|CBW22152.1| conserved hypothetical exported protein [Bacteroides fragilis 638R]
          Length = 482

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/285 (8%), Positives = 75/285 (26%), Gaps = 24/285 (8%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L+A  +VM                  +         S  +  + +    +   +  L++ 
Sbjct: 9   LLALAVVM----PASAQKFFKDAISLSDVSLWQQGNSLYVDMKIDMKNLTVSPERMLTLT 64

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T    ++ +       + ++         + +          +            + 
Sbjct: 65  PLLTDGQHNVALEEIIINGKRRQKAYLRGLAISRELPAGIVIPYNKREVLNYAQVIPYEP 124

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +                   + ++    D++ +     +      ++  V +      
Sbjct: 125 WMANASLNLVENLCGCGNNEEMLAQELITNDVSTEAKRLSA------MIPVVAYIQPTVE 178

Query: 224 ILISIIDQRNTPM-FDKSSSIPLPETIVV---LQKIGEVLAHSTEVIS-------IRGHT 272
           ++ +  +Q    + F  S ++  PE +     L  I  +        +       I G  
Sbjct: 179 VVKNRSEQYEAHLDFPVSKAVIQPEFMNNHKELMNIHAMFDKIQNDKNLTVTGISIEGFA 238

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N +LS  RA +    L  +     ++ K++    
Sbjct: 239 SPE---GPLKFNEQLSQKRAEALKNYLTTNEKVPGKLYKVTFGGE 280


>gi|148549819|ref|YP_001269921.1| hypothetical protein Pput_4617 [Pseudomonas putida F1]
 gi|148513877|gb|ABQ80737.1| hypothetical protein Pput_4617 [Pseudomonas putida F1]
          Length = 247

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMW--IINATDD 59
                    W I +AD MT +M  FLV+    +++   
Sbjct: 11 RSKDEGEKPFW-ISFADLMTAMMILFLVVMVAALSSVTQ 48



 Score = 36.1 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 60/213 (28%), Gaps = 25/213 (11%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                   + EK   +  +  +   +       +  LS       + ++  +  +K IS 
Sbjct: 7   PSAARSKDEGEKPFWISFADLMTAMMILFLVVMVAALSSVTQRINQAEQGEKQRSKDISQ 66

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259
               L                   IS  D      F  +      +    LQ++  ++  
Sbjct: 67  ICEHLSLKAKTASKTIVVDCKDNRISFGDA---GRFGHNQYALSNDGQSALQEVVPMILD 123

Query: 260 -------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS------GVSE 306
                      + + I G TD          N  LSL R+      L+ S      G+S 
Sbjct: 124 AANSEEGRKWFKQVVIEGSTDTD---GSYLYNLHLSLQRSEWVMCSLLDSRSPLQVGLSP 180

Query: 307 DRISKISGF---AHHRLKIASDPMNSANRRIDI 336
           +   +I             A D     +RR+++
Sbjct: 181 EHQQQIRSMFLAGGVSFNNAKDTKE-ESRRVEL 212


>gi|124002809|ref|ZP_01687661.1| hypothetical protein M23134_04257 [Microscilla marina ATCC 23134]
 gi|123992037|gb|EAY31424.1| hypothetical protein M23134_04257 [Microscilla marina ATCC 23134]
          Length = 421

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 34/122 (27%), Gaps = 28/122 (22%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-------------STEVISIRGHTD------ASPF 277
           F      P P+    LQ++ + +                   + +RG+ D        P 
Sbjct: 286 FHTGWHTPKPQDYQYLQQLIKEIKEKVAIYRRNNDNKPMVIQLDVRGYADKQGFYYNQPI 345

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI---SKISGFAHHRLKIASDPMNSAN--- 331
                 N RLS  RA +  Q L K  +    I       G              + N   
Sbjct: 346 AQRQAQNKRLSEWRARTIGQFLQKY-LKSQSIKVALSTQGLGETLP--PGVTDGAVNDPL 402

Query: 332 RR 333
           RR
Sbjct: 403 RR 404


>gi|253990922|ref|YP_003042278.1| outer membrane protein [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782372|emb|CAQ85536.1| Putative outer membrane protein [Photorhabdus asymbiotica]
          Length = 250

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F  + S    +    L  + + L+      ++I G  D+         N  L+  RA S
Sbjct: 149 LFPVNESQLTSKGKATLLVVIKELSSIPVSEMTIYGIADS---SGNYPMNKVLANKRAES 205

Query: 295 AYQVLMKSGV 304
             Q L++ G+
Sbjct: 206 VRQFLIEEGL 215


>gi|226365373|ref|YP_002783156.1| hypothetical protein ROP_59640 [Rhodococcus opacus B4]
 gi|226243863|dbj|BAH54211.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 172

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 14/106 (13%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  ++     + V ++ +   +      I I  +   +           L+  RA +  
Sbjct: 80  FESGTAELNAISDVTIKAVAAAMKAGDSKIEIEAYASNTDEAAAEL----LADQRAQAVA 135

Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-RRIDILVEDR 341
             L   GV + RIS   G         ++P    N  +++I VED 
Sbjct: 136 NALEAQGVDKSRIST-EG--------TANPPEGVNVDQVEITVEDS 172


>gi|332826567|gb|EGJ99396.1| hypothetical protein HMPREF9455_00429 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 489

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 5/56 (8%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320
            S+ G+            N +L+ +RA S    L+   GV  ++   + G      
Sbjct: 242 FSVAGYASPE---GGFEHNRKLAENRANSFADYLVTKFGVPRNKF-TVDGMGEDWP 293


>gi|317476092|ref|ZP_07935344.1| hypothetical protein HMPREF1016_02327 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907730|gb|EFV29432.1| hypothetical protein HMPREF1016_02327 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 484

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 234 TPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292
              F+   S +  P  +V L ++  V       +S+ G  D+         N  LS+ RA
Sbjct: 383 FFFFELGTSHLTDPSQLVNLDELARVAKKYGLSVSVIGAADSM--TGTVSVNNALSVSRA 440

Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
               + L+K GV  D+I +    G + +    A+
Sbjct: 441 GYIAEELIKRGVLGDKIVQTHQGGISDYTPNEAN 474


>gi|288803219|ref|ZP_06408653.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|288334260|gb|EFC72701.1| conserved hypothetical protein [Prevotella melaninogenica D18]
          Length = 360

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 10/87 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           D      F +       E    L  +          + I G    +        N RLS 
Sbjct: 270 DNLVFVTFAQGKYFLTNEAKKALDDVKA-----GRHVQIVG---TASPEGPKALNDRLSQ 321

Query: 290 DRAYSAYQVLMKSG--VSEDRISKISG 314
           +RA    + L   G  V E +   + G
Sbjct: 322 NRADVVAKYLQSRGVIVDEAKGQGVQG 348


>gi|167765325|ref|ZP_02437438.1| hypothetical protein BACSTE_03713 [Bacteroides stercoris ATCC
           43183]
 gi|167696953|gb|EDS13532.1| hypothetical protein BACSTE_03713 [Bacteroides stercoris ATCC
           43183]
          Length = 387

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/227 (10%), Positives = 67/227 (29%), Gaps = 6/227 (2%)

Query: 88  NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147
           N      +N +   +  +   N  + K  +   K       N +   +    +      +
Sbjct: 132 NSGMGEDRNSMSSKLGLNFNFNLGESKAWTLAVKPALVYDMNAMGTEAVRFHANRAAWEI 191

Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207
           +                  +   +   +  L+ +             + +  +  +S L 
Sbjct: 192 SAGLTYHFGCSNGRHYFTEVRPYDQAEVNQLNAQINRLRAEADNTAKVLQDANRKVSDLE 251

Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266
           ++               + +      + + F +         +  +++I   L +  E  
Sbjct: 252 SELAACRNRKPEVVKDTIDNSKKLLESVITFRQGRIGIDNSQLPNVERIATYLRNHKEAG 311

Query: 267 SI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
            + +G+         A  N R++  RA +   +L+ +  +++DRI  
Sbjct: 312 VVIKGYASPE---GSAEVNERIARQRAEAVRNMLVNRYRIAKDRIVA 355


>gi|196228648|ref|ZP_03127514.1| hypothetical protein CfE428DRAFT_0678 [Chthoniobacter flavus
           Ellin428]
 gi|196226929|gb|EDY21433.1| hypothetical protein CfE428DRAFT_0678 [Chthoniobacter flavus
           Ellin428]
          Length = 198

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 20/154 (12%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
              Q++ K+I    +    +        E  +    +       T  F+   +    +  
Sbjct: 53  AERQEVLKRIDRMPNVTAENKERLYAYVERAQNLQRL------LTVSFETGRTRVSEKET 106

Query: 250 VVLQK------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302
             + K         +   +  +  + G+ D        + N +LS +RA S   +L K  
Sbjct: 107 ARVVKASKQASFTAMARDAAAIFVVLGYADQ---HGDEKKNLQLSTERATSVMDLLRKQC 163

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           GV    + +        L    +P    NR  +I
Sbjct: 164 GV--HNVIQTVPMGSPLLFDPKNPGE--NRVAEI 193


>gi|298291606|ref|YP_003693545.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
 gi|296928117|gb|ADH88926.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
          Length = 725

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 75/276 (27%), Gaps = 13/276 (4%)

Query: 54  INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113
           ++ T +    A            +    G+  +  PP  S          + +T +    
Sbjct: 451 LSVTGEAQDSAAYTTVQAALSQPIPRGFGLQADVRPPVVSPYVFSMRKDADGLTISGFFP 510

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
                 +     + +     +++              +       +   LE    + ++ 
Sbjct: 511 SPDEHQRLVAAAKAQFLGAPVNDVSALAQGAPQGFATAAMAAMR-ELARLEAGEARFDDA 569

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
            L                              +  D   +    +       I+ +  + 
Sbjct: 570 KLKLTGTALYAGAVASIHANLATALPPGFALEVTLDVTSRHEAVDHAACQKSINELLDKG 629

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           T +F    +   P +  +L  +    A   +  ++   T   P    A     L+  RA 
Sbjct: 630 TIVFKGQGADIDPASQGLLDHVAAAAASCPD--TLIEITVRQPQTTPA-----LASARAQ 682

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           S  Q L  +G++ DR+  I G    R  +A+    +
Sbjct: 683 SVTQYLAAAGIAPDRLF-IGG----RPALAAQTPEA 713


>gi|260591234|ref|ZP_05856692.1| putative immunoreactive antigen PG32 [Prevotella veroralis F0319]
 gi|260537099|gb|EEX19716.1| putative immunoreactive antigen PG32 [Prevotella veroralis F0319]
          Length = 360

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 26/87 (29%), Gaps = 10/87 (11%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           D      F +       E    L  +      S   + I G    +        N RLS 
Sbjct: 270 DNLVFVTFAQGKYFLTNEAKKALDSV-----KSGRHVQIVG---TASPEGSKEFNDRLSQ 321

Query: 290 DRAYSAYQVLMKSG--VSEDRISKISG 314
           +RA    + L   G  V E +   + G
Sbjct: 322 NRANIVAKYLEGRGVVVDEAKGQGVQG 348


>gi|218709359|ref|YP_002416980.1| hypothetical protein VS_1368 [Vibrio splendidus LGP32]
 gi|218322378|emb|CAV18531.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 236

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 67/219 (30%), Gaps = 30/219 (13%)

Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205
           S   +   G+     +DL   +     +    L ++ ++   + K + +  K+    +  
Sbjct: 7   SQKPNEGSGEHWMSVSDLMAGLMMVFLFISVALMRDAMVERDKIKDVAETYKQTQQAIYV 66

Query: 206 LVADNIVKGVLF-ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-------E 257
            + +   K +           +S+       +F    +    +   +L           E
Sbjct: 67  ALLEEFAKDLDHWGAEIDRDTLSVNFTAPDVLFANGKANLTDQFQSILDDFFPRYLAVLE 126

Query: 258 VLAHSTEVISIRGHTDASPFRNI-----ARDNWRLSLDRAYSAYQVLMKSGVSEDRI--- 309
                 + I I GHT +    +        +N RLS  R  +    +M      +++   
Sbjct: 127 KYQPIIQEIKIEGHTSSRWNHDSTDYEAYFNNMRLSQSRTRAVLGYVMAL----EQVKND 182

Query: 310 --------SKISGFAHHRLK--IASDPMNSANRRIDILV 338
                       G++  +L   +A       +RR+   +
Sbjct: 183 YYEWVKGNVAAVGYSSSKLALDVAGVEDEKRSRRVSFRI 221


>gi|311281279|ref|YP_003943510.1| cell wall hydrolase/autolysin [Enterobacter cloacae SCF1]
 gi|308750474|gb|ADO50226.1| cell wall hydrolase/autolysin [Enterobacter cloacae SCF1]
          Length = 444

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 62/249 (24%), Gaps = 10/249 (4%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
           +  + +D   K+++       G       +   D      RS   K D S+   +     
Sbjct: 49  YAFSQSD---KRSVALDIKQTGVIQGLPLRFSGDNLVKSIRSGTPKDDQSLRLVVDLTEN 105

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
                   Q      +   I   +             R  E                  +
Sbjct: 106 GKTRAVKQQNGSNYMVVFTINADAPPPPPPPPPVVAKRVEEPVVAPRPVEPARNPFKSPD 165

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231
                  S         + R     K I +  +G    +        T    + I+I  +
Sbjct: 166 ERITSVTSSSPATRPAARTRAVSGDKVIIAIDAGHGGQDPGAIGPGGTKEKNVTIAIARK 225

Query: 232 -----RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNW 285
                 + PMF         +  + +    +V         +  H DA+P R       W
Sbjct: 226 LRAMLNDDPMFK-GVMTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRDATGASVW 284

Query: 286 RLSLDRAYS 294
            LS  RA S
Sbjct: 285 VLSNRRANS 293


>gi|189461658|ref|ZP_03010443.1| hypothetical protein BACCOP_02321 [Bacteroides coprocola DSM 17136]
 gi|189431630|gb|EDV00615.1| hypothetical protein BACCOP_02321 [Bacteroides coprocola DSM 17136]
          Length = 379

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 12/161 (7%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            T   ++     N  +  L  E     +  + LQ    ++   L+  +        + + 
Sbjct: 209 QTPYNQAEVDLLNDAINTLRAESAAKTEGLEALQYENDQLKEKLNECMNAPKEVETIVQN 268

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278
           T +          +   F +  +    + +  +++I   + ++     + +G+       
Sbjct: 269 THS------KSLESVITFGQGKATVSADQLPNVERIATYMKNNPSSTVVIKGYASPE--- 319

Query: 279 NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK-ISGFAH 317
             A  N R++  RA +   +L+ K  +S  RI+    G   
Sbjct: 320 GSAEINARIAKQRAEAVKTILINKYKISASRITAEGQGVGE 360


>gi|171059943|ref|YP_001792292.1| outer membrane protein [Leptothrix cholodnii SP-6]
 gi|170777388|gb|ACB35527.1| outer membrane protein [Leptothrix cholodnii SP-6]
          Length = 155

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 39/140 (27%), Gaps = 11/140 (7%)

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
                    L   R   L +L  ++   L G            E+    I +        
Sbjct: 10  AATGPAPPALFEPRALSLAELDAELRRELKGTPVQISATAASSESPALLIGV-----PQP 64

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F+  S+   P    VL ++   L  +     ++      P     +       DRA +
Sbjct: 65  HGFELGSAAVKPALAAVLDRLVAALKGNP-RWLVQVSAPFDPRSGSFQ-----GQDRASA 118

Query: 295 AYQVLMKSGVSEDRISKISG 314
               L+  GV+  R     G
Sbjct: 119 VRDYLVVRGVAAPRFEPPRG 138


>gi|198276293|ref|ZP_03208824.1| hypothetical protein BACPLE_02485 [Bacteroides plebeius DSM 17135]
 gi|198270735|gb|EDY95005.1| hypothetical protein BACPLE_02485 [Bacteroides plebeius DSM 17135]
          Length = 379

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 61/164 (37%), Gaps = 25/164 (15%)

Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
           +  +   L ++ +  ++ N  ++  L     E     K    L++  K++ + +    + 
Sbjct: 213 NQAEVNSLNETINALRAENARKDEALGAKDAENARLEKELTDLRNAPKQVETIIQNTHSK 272

Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISI 268
           ++   V                     F +  +    + +  +++I   + ++    +SI
Sbjct: 273 SLESVVT--------------------FRQGKTTISTDQVPNVERIATYMKNNPKSTVSI 312

Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
           +G+         A  N R++  RA +   +L+ K  +S  RI+ 
Sbjct: 313 KGYASPE---GSAEVNARVAKQRAEAVKNMLISKYKISASRITA 353


>gi|253563116|ref|ZP_04840573.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251946892|gb|EES87174.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 482

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/285 (9%), Positives = 73/285 (25%), Gaps = 24/285 (8%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L+A  +VM                  +         S  +  + +    +   +  L++ 
Sbjct: 9   LLALAVVM----PASAQKFFKDAISLSDVSLWQQGNSLYVDMKIDMKNLTVSPERMLTLT 64

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T    ++ +       + ++         + +          +            + 
Sbjct: 65  PLLTDGQHNVALEEIIINGKRRQKAYLRGLAISRELPAGIVIPYNKREVLNYAQVIPYEP 124

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +           L +        ++ L         +        ++  V +      
Sbjct: 125 WMANASLN------LVENLCGCGNNEEMLAQELITNDVSTEAKRLSTMIPVVAYIQPTVE 178

Query: 224 ILISIIDQRNTPM-FDKSSSIPLPETIVV---LQKIGEVLAHSTEVIS-------IRGHT 272
           ++ +  +Q    + F  S ++  PE +     L  I  +        +       I G  
Sbjct: 179 VVKNRSEQYEAHLDFPVSKAVIQPEFMNNHKELMNIHAMFDKIQNDKNLTVTGISIEGFA 238

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N +LS  RA +    L  +     ++ K++    
Sbjct: 239 SPE---GPLKFNEQLSQKRAEALKNYLTTNEKVPGKLYKVTFGGE 280


>gi|265755675|ref|ZP_06090296.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
 gi|263234281|gb|EEZ19874.1| bacterial outer membrane protein [Bacteroides sp. 3_1_33FAA]
          Length = 380

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 55/162 (33%), Gaps = 8/162 (4%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL--VADNIVKGVLFE 218
           ++        + Y    + +        + +L D   ++++ +     +   +       
Sbjct: 203 SNGTHHFTTMKPYDPVEIGELNDAVNNLRSQLNDKDMQLNNAMQQANNLQRELADCRTQA 262

Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277
                ++ +     +   F +  S+     +  ++++   +    E  + I+G+      
Sbjct: 263 ANIETVVKTNRIPESIITFRQGKSVVDASQLPNVERVATYMKKHPEARVIIKGYASPE-- 320

Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK-ISGFAH 317
                 N +L+  RA S   +L+K   +S+ RI+    G   
Sbjct: 321 -GNLAFNEKLANARAESVKTILVKRYKISDTRITAEGQGIGD 361


>gi|121605795|ref|YP_983124.1| hypothetical protein Pnap_2904 [Polaromonas naphthalenivorans CJ2]
 gi|120594764|gb|ABM38203.1| protein of unknown function DUF748 [Polaromonas naphthalenivorans
            CJ2]
          Length = 1298

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 199  ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258
            + +   G   + + + V  E  R  +   +     T           P+    L K    
Sbjct: 1160 LDAERDGFQREQLAEKVRAEKRRQMVRDGLALSPETS--------VSPDEYPALLKAVYK 1211

Query: 259  LAHSTEVISIRGHTDASP-----------FRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307
             +   +  ++ G     P                     L++ RA S    L+  G+   
Sbjct: 1212 QSELPKPRNLIGLVKDQPVAEMEKLLLAGIPASPEALHELAVKRAISVKDYLISRGLPPA 1271

Query: 308  RISKISGFAHHRLKIASDPMNSA 330
            R+    G A      A    ++ 
Sbjct: 1272 RLF--LGAAKAMPPEAKSTPHAE 1292


>gi|317476790|ref|ZP_07936033.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316906965|gb|EFV28676.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 377

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 23/157 (14%)

Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221
           D   ++ +E +     L      A   +K L D   +    ++  V +N        T  
Sbjct: 221 DQINNMRREADDNAAALKNANQKAADLEKALNDCKNQAPKVITETVTNNKKTLESVVT-- 278

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280
                          F +  +         +++I   L +     +SI+G+         
Sbjct: 279 ---------------FRQGGTSVESSQTPNVERIATYLKNHKNATVSIKGYASPE---GN 320

Query: 281 ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
              N R++  RA S   +L+ +  ++ +RI+   G  
Sbjct: 321 VDVNARIAKQRAESVKNMLINRYKIAANRITA-EGQG 356


>gi|163854528|ref|YP_001628826.1| hypothetical protein Bpet0224 [Bordetella petrii DSM 12804]
 gi|163258256|emb|CAP40555.1| conserved hypothetical protein [Bordetella petrii]
          Length = 237

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDT 61
          II+K+    +        W I +AD M+ L+  FLV+  +       
Sbjct: 6  IIVKRGGREEAEK---PFW-ISFADLMSALVVLFLVVMGVALLSVTQ 48


>gi|325297548|ref|YP_004257465.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324317101|gb|ADY34992.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
          Length = 487

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 231 QRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 FD +++        V L  +  V       + + G  D+      A  N  LS 
Sbjct: 383 SPVYFFFDLNTAHLTDSLQKVNLDALAHVAKKYGLSVKVTGAADS--ATGTASINNALST 440

Query: 290 DRAYSAYQVLMKSGVSEDRISK 311
            RA      L+K G+S + I++
Sbjct: 441 ARADYIAGELIKRGLSAESITR 462


>gi|229069713|ref|ZP_04202999.1| Excalibur domain protein [Bacillus cereus F65185]
 gi|228713453|gb|EEL65342.1| Excalibur domain protein [Bacillus cereus F65185]
          Length = 288

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/175 (10%), Positives = 50/175 (28%), Gaps = 1/175 (0%)

Query: 40  FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP-PERSSQNKI 98
           F T+    F+   ++       K  + +        L      +     P  E+++    
Sbjct: 68  FSTLSFILFIFFLVLAILSVIKKTGVAKKQFIITAVLFVIFVALLGISAPSSEKTTATST 127

Query: 99  DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158
            ++ +    K+S   K     +  +  + + +   L+  Q  +        D +  K   
Sbjct: 128 KVASNNEEPKDSEQKKELEKKEADEKTQKQEDEKRLAEEQARKQEDEKRQADEQARKQED 187

Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213
           +    ++   K++        ++     + +KR  D   +               
Sbjct: 188 EKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQARKQQEEQKAQQAQTQP 242


>gi|237718935|ref|ZP_04549416.1| LOW QUALITY PROTEIN: bacterial outer membrane protein [Bacteroides
           sp. 2_2_4]
 gi|229451713|gb|EEO57504.1| LOW QUALITY PROTEIN: bacterial outer membrane protein [Bacteroides
           sp. 2_2_4]
          Length = 310

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + +    LT        +         +       +  L+       ++           
Sbjct: 117 ANNATFELTAGLTYHFKMSTGNHYFTKVKVYNQSEIDDLNVAINALREQVGSRDRELNNA 176

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  +SGL  + + +          ++ +     +   F +  S      +  ++++   +
Sbjct: 177 NQRISGLHKE-LEECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYM 235

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI-SGFA 316
               +  + I+G+            N +++  RA +   +L+ K  ++  RI+    G  
Sbjct: 236 KKYPDSKVIIKGYASPE---GNVEINAKIATARAEAVKTILVNKYKINTSRITAEDQGVG 292

Query: 317 H--HRL 320
                 
Sbjct: 293 DMFTEP 298


>gi|196232100|ref|ZP_03130955.1| hypothetical protein CfE428DRAFT_4121 [Chthoniobacter flavus
           Ellin428]
 gi|196223822|gb|EDY18337.1| hypothetical protein CfE428DRAFT_4121 [Chthoniobacter flavus
           Ellin428]
          Length = 304

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 68/247 (27%), Gaps = 24/247 (9%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
             +   I +         +  ST+Q              S+S  +    ++    +    
Sbjct: 71  PPLRGMISKGKGHQEASDRPASTDQPSSTDNTPATPSSNSSSTPAGETNSTTPSTTHDTT 130

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215
                 +   ++   +   +    +E            D    I    SG   D +   V
Sbjct: 131 SSAPVAEPPATVTSPQRIEMDLSQQENKTVKAEVLTRVDQMPNI----SGGNKDKLYMAV 186

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA------HSTEVISIR 269
                   I I+I        F    +      I  L+   E           T V  I 
Sbjct: 187 EKARKMGKI-ITIP-------FGSGKTELTATDIQQLKAELEKPEIVSLRGDPTAVFVIL 238

Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329
           G+ D    +  A+ N  +S  RA S  +++         +    G    +L  A +    
Sbjct: 239 GYAD---PKGDAKKNITISESRADSVRKIMKDKC-DVINVMHTVGMGGSKLLDAHNLE-- 292

Query: 330 ANRRIDI 336
            NR ++I
Sbjct: 293 KNRIVEI 299


>gi|58038713|ref|YP_190677.1| hypothetical protein GOX0238 [Gluconobacter oxydans 621H]
 gi|58001127|gb|AAW60021.1| Hypothetical protein GOX0238 [Gluconobacter oxydans 621H]
          Length = 255

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 17/117 (14%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWR 286
           + D     +F   S     +++  LQ  G  L+H  E   +      +           R
Sbjct: 136 LPDGGMRVLFPSGSEALNADSLKALQDYGTELSHHPEQRVVL--MAYAALPGDDVSMPRR 193

Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS-KISGF---AHHRLKIASDPMNSANRRIDILVE 339
           ++L RA +   + + +GV+  R+  +  G                     R+D+++E
Sbjct: 194 IALARALAVRSIFIHAGVATTRLYPRALGRPDAGDTAPAD----------RLDVVIE 240


>gi|183220475|ref|YP_001838471.1| hypothetical protein LEPBI_I1072 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910586|ref|YP_001962141.1| OmpA-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167775262|gb|ABZ93563.1| OmpA-related protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778897|gb|ABZ97195.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 417

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAY 293
           FD  SS    E    L  I   L +  +   I   T  SP++       +N+ L  +RA 
Sbjct: 315 FDLPSSRIHLEGRARLDAIARSLENEYKEYDILIITYTSPYKEDLPGNFENYDLGFERAQ 374

Query: 294 SAYQVLMKSGVSEDRIS 310
           +  +VL + GVS  RI 
Sbjct: 375 AISRVLREKGVSPRRII 391


>gi|293370937|ref|ZP_06617480.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|294647105|ref|ZP_06724710.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294809380|ref|ZP_06768089.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|292634006|gb|EFF52552.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292637551|gb|EFF55964.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
 gi|294443398|gb|EFG12156.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 300

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + +    LT        +         +       +  L+       ++           
Sbjct: 107 ANNATFELTAGLTYHFKMSTGNHYFTKVKVYNQSEIDDLNVAINALREQVGSRDRELNNA 166

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  +SGL  + + +          ++ +     +   F +  S      +  ++++   +
Sbjct: 167 NQRISGLHKE-LEECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYM 225

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI-SGFA 316
               +  + I+G+            N +++  RA +   +L+ K  ++  RI+    G  
Sbjct: 226 KKYPDSKVIIKGYASPE---GNVEINAKIATARAEAVKTILVNKYKINTSRITAEDQGVG 282

Query: 317 H--HRL 320
                 
Sbjct: 283 DMFTEP 288


>gi|90410144|ref|ZP_01218161.1| chemotaxis protein MotB, putative [Photobacterium profundum 3TCK]
 gi|90329497|gb|EAS45754.1| chemotaxis protein MotB, putative [Photobacterium profundum 3TCK]
          Length = 219

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 23/163 (14%)

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             ++  +  ++        + G+       G+      T   ISI D     +FD +   
Sbjct: 40  ALVQISQAHEESQNTRIVIIKGINDALETAGIEVSADATTGDISITDS---ILFDLNDYK 96

Query: 244 PLPETIVVLQKIGEVLAHSTEVIS----------IRGHTDASPFRNIARDNWRLSLDRAY 293
                 V L K   + ++                I GH+ +         N  LS+ RA 
Sbjct: 97  LKASGKVFLDKFIPIYSNVIFQTEATAEEVSRIVIEGHSSSE---GAFARNMELSVLRAN 153

Query: 294 SAYQVLMKSGVSED----RISKISGFA--HHRLKIASDPMNSA 330
           S  + +     +      +   ISG           +DP +  
Sbjct: 154 SVSKYVSSMMFANKSPFFKKVAISGRGPIEANP-DKTDPADRK 195


>gi|296115203|ref|ZP_06833844.1| hypothetical protein GXY_05461 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978304|gb|EFG85041.1| hypothetical protein GXY_05461 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 124

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 12/108 (11%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F ++S+        V+ +  +        + + G+  AS   +       L++DRA  
Sbjct: 26  VFFTQNSTQLDTPAQAVISQAAQRALAHNATVRVEGYAAASKDLSADEL---LAIDRAKI 82

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340
             + L   GV   RI +       + +    ++    A+RR++I V  
Sbjct: 83  VARQLAVDGVDASRIRQ-------QPRGPVNNEDGALASRRVEIEVVR 123


>gi|189463470|ref|ZP_03012255.1| hypothetical protein BACCOP_04189 [Bacteroides coprocola DSM 17136]
 gi|265753822|ref|ZP_06089177.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|189429899|gb|EDU98883.1| hypothetical protein BACCOP_04189 [Bacteroides coprocola DSM 17136]
 gi|263235536|gb|EEZ21060.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 468

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 8/101 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F  +++     +    L ++  V       +S+ G  D+      A  N  LS 
Sbjct: 364 SPVYFFFQLNTARLTDTSQTLNLDELARVAKKYGLSVSVIGAADSM--TGTASVNNVLSA 421

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIASDPMN 328
            RA    + L+K GVS D+I+K    G + +     ++   
Sbjct: 422 SRADYIAEELIKRGVSGDKITKTHQGGISDY---APNEANR 459


>gi|255011480|ref|ZP_05283606.1| hypothetical protein Bfra3_20215 [Bacteroides fragilis 3_1_12]
 gi|313149301|ref|ZP_07811494.1| bacterial outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313138068|gb|EFR55428.1| bacterial outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 386

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
           K  + L +          A +  +    +  +  I  S     +   F +  +      +
Sbjct: 235 KNTEALEEAARKVTELKTALDKCRNQEPKIVKDTIDNSRKTLESVITFRQGRTTVDNSQL 294

Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307
             +++I   L +  E   + +G+            N R++  RA    ++L+ + G++E+
Sbjct: 295 PNVERIATYLKNHKEASVVIKGYASPE---GSVEVNDRIARQRAEIVKKMLVNRYGIAEE 351

Query: 308 RISK-ISGFAH--HRL---KIA----SDPMNSANR 332
           RI     G  +        +++    +    S NR
Sbjct: 352 RIVAEGQGVGNMFEEPDWNRVSICTINARTESRNR 386


>gi|240950213|ref|ZP_04754500.1| hypothetical protein AM305_03163 [Actinobacillus minor NM305]
 gi|240295300|gb|EER46086.1| hypothetical protein AM305_03163 [Actinobacillus minor NM305]
          Length = 229

 Score = 41.1 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 9/117 (7%)

Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247
           + +  Q L  +    L    A      + F  T   +L    D      F  + +   P 
Sbjct: 56  QNEIYQALKDEFEPNLETWKARIDKDTLTFIFTDPEVLFKTGDSTLQERFKTTLNEFFPR 115

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVL 299
            + V+    + +        + GHT +    N   D     N RLS +R       +
Sbjct: 116 YMRVINDYKDSINEVR----VEGHTSSEWNLNSDEDTAYFENMRLSQERTREVLYYI 168


>gi|226225592|ref|YP_002759698.1| hypothetical protein GAU_0186 [Gemmatimonas aurantiaca T-27]
 gi|226088783|dbj|BAH37228.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 230

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 36/151 (23%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---------AHSTEVI 266
                 + +L+ + D     +F++  S        V++    +L           + + +
Sbjct: 65  SIPNDPSTVLVILPDS---VLFERGDSRMSAAGQNVVRIATPLLAGVICADSIRQTLDQV 121

Query: 267 SIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVLMKSGVSEDR---------ISKI 312
            + GHTD +             N  LS  R+ +       +    +R         +   
Sbjct: 122 VVEGHTDNTIPFGMRPEAGRMFNLELSQRRSMNFVA--TSTATLAERDTLLECYLGLVSA 179

Query: 313 SGFAHHRLK----IASDPMNSANRRIDILVE 339
           +G             S P     RR+ + + 
Sbjct: 180 TGRGQENPLPRIPADSSPQ----RRVVLRIR 206


>gi|190015983|ref|YP_001965191.1| OmpA [Rhodococcus sp. NS1]
 gi|114796823|gb|ABI79416.1| OmpA [Rhodococcus sp. NS1]
          Length = 425

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 21/227 (9%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
               +  + +L                S  G      T L+             +     
Sbjct: 198 GADPQQIVDHLRAGSALPDLPGVTVVLSGIGYTAAPQTPLDAPRRGRLTGQWEQVLTAAG 257

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
             ++            +      V       +  + TR  ++    D ++   F+ +  +
Sbjct: 258 AVVQVDSTPSTALPVQTEQPVETVTVPPAPQIPVDCTRASLV---FDSQSQVAFEPNEPV 314

Query: 244 PLPETIVV--LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
            + E      L  +   L       ++ RG T             +L L RA   + +L+
Sbjct: 315 LIDEAAARAALGPVISWLTADPARRAVLRGTTADD---GTKIYREQLGLRRAEVVFALLI 371

Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM---------NSANR--RIDI 336
             GVS +++  + G      +   D            + NR  R+D+
Sbjct: 372 AGGVSPEQLHAV-GVGSDFPEFVPDRGPDGQLLPGPAALNRSIRVDL 417


>gi|237712867|ref|ZP_04543348.1| bacterial outer membrane protein [Bacteroides sp. D1]
 gi|262409699|ref|ZP_06086238.1| bacterial outer membrane protein [Bacteroides sp. 2_1_22]
 gi|229447091|gb|EEO52882.1| bacterial outer membrane protein [Bacteroides sp. D1]
 gi|262352441|gb|EEZ01542.1| bacterial outer membrane protein [Bacteroides sp. 2_1_22]
          Length = 305

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           + +    LT        +         +       +  L+       ++           
Sbjct: 112 ANNATFELTAGLTYHFKMSTGNHYFTKVKVYNQSEIDDLNVAINALREQVGSRDRELNNA 171

Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259
           +  +SGL  + + +          ++ +     +   F +  S      +  ++++   +
Sbjct: 172 NQRISGLHKE-LEECRTKVVPIETVVKTARVPESIITFRQGRSSVDASQLPNVERVASYM 230

Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI-SGFA 316
               +  + I+G+            N +++  RA +   +L+ K  ++  RI+    G  
Sbjct: 231 KKYPDSKVIIKGYASPE---GNVEINAKIATARAEAVKTILVNKYKINTSRITAEDQGVG 287

Query: 317 H--HRL 320
                 
Sbjct: 288 DMFTEP 293


>gi|307246105|ref|ZP_07528187.1| hypothetical protein appser1_13080 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307255086|ref|ZP_07536904.1| hypothetical protein appser9_13200 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259523|ref|ZP_07541248.1| hypothetical protein appser11_13200 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|157837298|gb|ABV82725.1| OmpA [Actinobacillus pleuropneumoniae]
 gi|306853040|gb|EFM85263.1| hypothetical protein appser1_13080 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306861959|gb|EFM93935.1| hypothetical protein appser9_13200 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866459|gb|EFM98322.1| hypothetical protein appser11_13200 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 230

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 15/127 (11%)

Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244
           A +     QD  +KI   L    +  +      +  +  +     D     +F+   S  
Sbjct: 45  AKRVADNYQDNQEKIYQALQTEFSPKLKDW-KAKIDKDTLTFIFTDPE--VLFETGRSDL 101

Query: 245 LPETIVVLQKIGEVLAHSTEVI-------SIRGHTDASPFRNIARD-----NWRLSLDRA 292
                 +L           +          I GHT        + D     N +LS DR 
Sbjct: 102 NAPFKKILDDFFPRYMKVVDNYKTSISEIRIEGHTSTEWDHKSSDDMAYFLNMQLSQDRT 161

Query: 293 YSAYQVL 299
            S    L
Sbjct: 162 RSVLIYL 168


>gi|120613375|ref|YP_973053.1| hypothetical protein Aave_4747 [Acidovorax citrulli AAC00-1]
 gi|120591839|gb|ABM35279.1| hypothetical protein Aave_4747 [Acidovorax citrulli AAC00-1]
          Length = 163

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + + +      F  + +   PE + +L  +    + + +   I+G++D    +N      
Sbjct: 66  LRVPEDGTVAEFSGTDTALPPEALALLDVVAADKSSAAQRWEIKGYSDRKAAKNAR---- 121

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRI 309
            ++L RA +  + L+  G+    +
Sbjct: 122 EIALARALAVRKELVARGIPAQNL 145


>gi|298481919|ref|ZP_07000108.1| major outer membrane protein OmpA [Bacteroides sp. D22]
 gi|298271783|gb|EFI13355.1| major outer membrane protein OmpA [Bacteroides sp. D22]
          Length = 394

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L+ + +K++   +             +     I+  I    N   F  + +    E   
Sbjct: 249 DLESMRRKLNDMSAENDRLKKALADGDKQKAQTIVKKIA-SANLVTFKINRTKLSNEARA 307

Query: 251 VLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
            L  + E++       V +I G+ DA      ++ N RLS +RA + Y  L+K  GVSE 
Sbjct: 308 NLGLLAEIIKLGDPETVYTITGYADA--GTGSSKGNERLSKERAENVYDCLVKEFGVSEK 365

Query: 308 RI 309
           ++
Sbjct: 366 QL 367


>gi|255690702|ref|ZP_05414377.1| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
 gi|260623733|gb|EEX46604.1| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
          Length = 494

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 7/98 (7%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F  +++     + +  L ++  V       + I G  D+S     A  N  LS+
Sbjct: 383 SPVYFFFTLNTAHLTDTSQMLNLDELARVAKKHNLSVKITGAADSS--TGTAVINDSLSV 440

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIAS 324
            RA      L + G+   R+ K  G      +    A+
Sbjct: 441 SRAEFIATELERRGIPSGRLLKA-GRGGIDDYLPTEAN 477


>gi|29345476|ref|NP_808979.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337368|gb|AAO75173.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 400

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250
            L+ + +K++   +             +     I+  I    N   F  + +    E   
Sbjct: 255 DLESMRRKLNDMSAENDRLKKALADGDKQKAQTIVKKIA-SANLVTFKINRTKLSNEARA 313

Query: 251 VLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307
            L  + E++       V +I G+ DA      ++ N RLS +RA + Y  L+K  GVSE 
Sbjct: 314 NLGLLAEIIKSGDPETVYTITGYADA--GTGSSKGNERLSKERAENVYDCLVKEFGVSEK 371

Query: 308 RI 309
           ++
Sbjct: 372 QL 373


>gi|284036688|ref|YP_003386618.1| hypothetical protein Slin_1774 [Spirosoma linguale DSM 74]
 gi|283815981|gb|ADB37819.1| hypothetical protein Slin_1774 [Spirosoma linguale DSM 74]
          Length = 453

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 5/78 (6%)

Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
              PE+   L           E   +I  + D+      A  N   + +RA +    L  
Sbjct: 126 RLTPESRTKLAAWASTFKAHPELSFTITLYWDSI---GAAASNQNTAENRANALRTFLHS 182

Query: 302 SGVSEDRI-SKISGFAHH 318
            G+S   I     G A  
Sbjct: 183 RGISPGSIAVATQGRAES 200


>gi|113460597|ref|YP_718662.1| hypothetical protein HS_0452 [Haemophilus somnus 129PT]
 gi|112822640|gb|ABI24729.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 229

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 29/173 (16%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
            ++  D  +KI   L      N+      +  +  +     D     +F    +    + 
Sbjct: 48  AEKYDDNQQKIYQALQSEFQSNLTNW-KAKIDKESLTFIFTDPE--VLFQTGRADLQSKF 104

Query: 249 IVVLQKIGEVLAHSTEVIS-------IRGHTDASPFRN-----IARDNWRLSLDRAYSAY 296
             +L           +          I GHT +   R         +N RLS +R  S  
Sbjct: 105 KEILTAFFPRYMKVIDQYRDFISEVRIEGHTSSDWSRLVSADVAYFENMRLSQERTRSVL 164

Query: 297 ---QVLMK----SGVSEDRISKISGFAHHRLKIASDPMNSANR----RIDILV 338
                L +     G  +  +S + G +  +  + +    S NR    R+   +
Sbjct: 165 EYTYYLPEVENYRGWIKKNVSAV-GLSSSK-IVLN-TDGSENREASKRVTFRI 214


>gi|295098325|emb|CBK87415.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 445

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 64/259 (24%), Gaps = 13/259 (5%)

Query: 52  WIINATDDD------TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
           +  +  D         +  + Q   P   +     K I        +S +  +DL+    
Sbjct: 49  YAFSQIDSRSVALDIKQTGVIQGL-PLQFSGNNLVKSIRSGTPKDAQSLRLVVDLTEKGK 107

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
                       T        +         +++ E    +               D   
Sbjct: 108 TKAVKQQNGANYTVVFTINADVPPPPPAPVVAKRVEAPVYTPRPSEPARNPFKSQNDRLT 167

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           ++        P +S  +      K  +   A         +      +  +       + 
Sbjct: 168 AVTSSNTVTRPAVSARRTPVSGDKVIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLR 227

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284
             + D    PMF         +  + +    +V         +  H DA+P RN      
Sbjct: 228 ALLNDD---PMFK-GVMTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRNATGASV 283

Query: 285 WRLSLDRAYS-AYQVLMKS 302
           W LS  RA S     L + 
Sbjct: 284 WVLSNRRANSEMANWLEEH 302


>gi|255008408|ref|ZP_05280534.1| hypothetical protein Bfra3_04661 [Bacteroides fragilis 3_1_12]
 gi|313146131|ref|ZP_07808324.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134898|gb|EFR52258.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 482

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/285 (9%), Positives = 75/285 (26%), Gaps = 24/285 (8%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L+A  +VM                  +         S  +  + +    +   +  L++ 
Sbjct: 9   LLALAVVM----PASAQKFFKDAISLSDVSLWQQGNSLYVDMQIDMKNLTVSPERMLTLT 64

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T    ++ +       + ++         + +          +            + 
Sbjct: 65  PLLTDGQHNVALEEIIINGKRRQKAYLRGLAISRELPAGIVIPYNKREVLNYAQVIPYEP 124

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +                   + ++    D++ +     +      +V  V +      
Sbjct: 125 WMANASLNLVENLCGCGNNEEMLAQELITNDVSTEAKRLSA------MVPVVAYIQPTVE 178

Query: 224 ILISIIDQRNTPM-FDKSSSIPLPETIVV---LQKIGEVLAHSTEVIS-------IRGHT 272
           ++ +  +Q    + F  S ++  PE +     L  I  +        +       I G  
Sbjct: 179 VVKNRSEQYEAHLDFPVSKAVIQPEFMNNHKELMNIHAMFDKIQNDKNLTVTGISIEGFA 238

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N +LS  RA +    L  +     ++ K++    
Sbjct: 239 SPE---GPLKFNEQLSQKRAEALKSYLTTNEKVPGKLYKVTFGGE 280


>gi|326424402|ref|NP_763392.2| membrane protein [Vibrio vulnificus CMCP6]
 gi|319999792|gb|AAO08382.2| membrane protein [Vibrio vulnificus CMCP6]
          Length = 204

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       T  F+   +    +      ++  +L   TE   I      +        N 
Sbjct: 68  IYQKVDIKTVYFNFDDAHIRLDQSSEFDELLALLNQGTEAKVIL--VGDTSPEGSDEYNQ 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R     + L+++G++ +RIS+
Sbjct: 126 VLAKKRTSVLKEALIENGIAPERISE 151


>gi|37675995|ref|NP_936391.1| outer membrane protein [Vibrio vulnificus YJ016]
 gi|37200535|dbj|BAC96361.1| outer membrane protein [Vibrio vulnificus YJ016]
          Length = 204

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       T  F+   +    +      ++  +L   TE   I      +        N 
Sbjct: 68  IYQKVDIKTVYFNFDDAHIRLDQSSEFDELLALLNQGTEAKVIL--VGDTSPEGSDEYNQ 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R     + L+++G++ +RIS+
Sbjct: 126 VLAKKRTSVLKEALIENGIAPERISE 151


>gi|254428896|ref|ZP_05042603.1| OmpA family protein [Alcanivorax sp. DG881]
 gi|196195065|gb|EDX90024.1| OmpA family protein [Alcanivorax sp. DG881]
          Length = 208

 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
            +Q     FD   S+   +   V+ +I  +VL+     ++I G T         + N RL
Sbjct: 74  YEQLYFVFFDFDKSLIRDDQQEVMDEIARDVLSSPDSQVAIVGDTSPE---GTIQYNQRL 130

Query: 288 SLDRAYSAYQVLMKSGVSEDRI 309
              RA +    L+  GV  +++
Sbjct: 131 GERRAEAISGELLNRGVHGEQL 152


>gi|239787605|emb|CAX84073.1| OmpA/MotB domain protein [uncultured bacterium]
          Length = 263

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 45/162 (27%), Gaps = 2/162 (1%)

Query: 27  PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG--KNLMTASKGIF 84
           P+    W +     MT+L+A  +++  I+  D+     +                   + 
Sbjct: 17  PSGSPGWLLPLVSMMTMLLAICILLLSISRPDELRLAEVVASIRNAFGLTGEFPVVSRVV 76

Query: 85  DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144
                P + +           I +    ++    + +    +     F +  S+ +   +
Sbjct: 77  SGGARPLQEAIEFEQAVQLVRIKERLESMQSRLPSAQGLEVKPVEEGFLVRLSRAALFPE 136

Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186
            SL    E    L +  +L   +                +A 
Sbjct: 137 GSLAIRPEALPLLKQMAELFAKLPNTVRIDSHAGDARLPVAA 178


>gi|327312534|ref|YP_004327971.1| hypothetical protein HMPREF9137_0228 [Prevotella denticola F0289]
 gi|326945028|gb|AEA20913.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 360

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +  L  ++++    +V + I + +    T     IS+ +      F ++  +     
Sbjct: 230 NDEINSLRNQLNAKPKEVVKEVIKEVIKEVPTTKTQTISV-ENLVFVTFQQAKYLLTAPN 288

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              L  I          + I G    +        N RLS +RA    + L   GV
Sbjct: 289 KKALDSIKA-----GRHVQIVG---TASPEGSKEFNDRLSQNRANVVAEYLKGRGV 336


>gi|325851851|ref|ZP_08171016.1| hypothetical protein HMPREF9303_0495 [Prevotella denticola CRIS
           18C-A]
 gi|325484693|gb|EGC87606.1| hypothetical protein HMPREF9303_0495 [Prevotella denticola CRIS
           18C-A]
          Length = 360

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
              +  L  ++++    +V + I + +    T     IS+ +      F ++  +     
Sbjct: 230 NDEINSLRNQLNAKPKEVVKEVIKEVIKEVPTTKTQTISV-ENLVFVTFQQAKYLLTAPN 288

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304
              L  I          + I G    +        N RLS +RA    + L   GV
Sbjct: 289 KKALDSIKA-----GRHVQIVG---TASPEGSKEFNDRLSQNRANVVAEYLKGRGV 336


>gi|94967302|ref|YP_589350.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549352|gb|ABF39276.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
           versatilis Ellin345]
          Length = 328

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 80/273 (29%), Gaps = 13/273 (4%)

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
               ++     +      ++Q+    +   +        +  + +Q  Q    E    +L
Sbjct: 22  QNTASTPSDNQKPAATAPAAQDSSSQAAQNNNGVTPAQEQGMAAHQPLQPDTHEGFWGHL 81

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           +   + ++ +  ++   ++  +L + T       K+ +       +          +   
Sbjct: 82  NPFARKKYVQRQMSPIRDRVNELDELTAKNSKDIKDVDARAQEGIRIASAKANEADQHAL 141

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
            A   +   +             +TT   I            F    S+   +    L  
Sbjct: 142 DAGNRAQQANTTATQASQHLQTVQTTVENIDQYKEASNIEIRFRPGQSVLSKKAKESLDD 201

Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKI 312
           + + LA     I  ++G         +       S   A    + L + S V   RI  +
Sbjct: 202 MSKGLADQKGYIVEVQGFAPGHGRVAVEN-----SQRIADEVVRYLVINSNVPVYRIYTM 256

Query: 313 SGFAHHRLKIASDPMNSANR-----RIDILVED 340
            G  + +++  S   +S  +     R++I +  
Sbjct: 257 -GMGNAKVQATSATADSKPKYTKGGRVEISLLQ 288


>gi|330445558|ref|ZP_08309210.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489749|dbj|GAA03707.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 202

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           +       T  F+   +    +       +  +L    +   I      +      + N 
Sbjct: 68  VKPKYDIQTVYFNYDDAHIRLDQNETYTLLFNLLEQKPQAKVIL--VGDTSPEGTDQYNK 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R       L+++G++ +RIS+
Sbjct: 126 ALAQRRTGVIKDALIENGIAPERISE 151


>gi|153865051|ref|ZP_01997721.1| conserved hypothetical protein [Beggiatoa sp. SS]
 gi|152145454|gb|EDN72279.1| conserved hypothetical protein [Beggiatoa sp. SS]
          Length = 296

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARD 283
           S++  +NT  F+   +    +   VL+ +   +   +   + I I GHTD S        
Sbjct: 179 SLMSGQNTVTFEPGKASLSEQAKRVLELLAIEICQKSFQIKRIVITGHTDNSQL--DDFK 236

Query: 284 NWRLSLDRAYSAYQVLMKS 302
           N +LS +RA +    LMK 
Sbjct: 237 N-KLSRERALAVADYLMKH 254


>gi|319900300|ref|YP_004160028.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
 gi|319415331|gb|ADV42442.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
          Length = 378

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
             E +     ++  +  A      LQ   + + +  + L A+      + + T   I  S
Sbjct: 215 QAEVDGLNAQINALRQEAGNTAAALQQSRQDVENLQNALNAEKNKAPQVVKET---IDNS 271

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286
                +   F +  +      +  +++I   L +     + I+G+         A  N R
Sbjct: 272 KHSLESVITFRQGKTAIDASQLPNVERIATYLKNHKSAKVVIKGYASPE---GSAEVNAR 328

Query: 287 LSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
           ++  RA +    L+ K  ++  RI    G       + +    +   R+ I
Sbjct: 329 IAKQRAEAVKSSLISKYKIAAGRIEA-EGQG-----VGNMFEEADWNRVSI 373


>gi|21224762|ref|NP_630541.1| hydrolytic protein [Streptomyces coelicolor A3(2)]
 gi|4158202|emb|CAA22765.1| putative hydrolytic protein [Streptomyces coelicolor A3(2)]
          Length = 464

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 35/157 (22%), Gaps = 9/157 (5%)

Query: 6   DKNQENDQFIIIKKKVAIDDTPNNL-------GSWKIVYADFMTVLMAFFLVMWIINATD 58
              QE    + +++                    W   +      L   F+++WI  A  
Sbjct: 186 GAKQERPYTLAVRRSGVEPTDVEGTYVQRGFLPRWLATFLGIALALAIAFVMIWI--AYK 243

Query: 59  DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118
              + +  +     G  L  +     +       S+  +   +      +   +   G  
Sbjct: 244 PQVRTSATEQTEQAGAALAPSPSATPELLPSTAGSAPAEQPQAQQPPTREPEDESGAGGE 303

Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
                 +R +            E            G 
Sbjct: 304 AAPAPEKREQPEKETSGGGGGDEKPDVEAPEPVAPGT 340


>gi|293371797|ref|ZP_06618207.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292633249|gb|EFF51820.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 389

 Score = 40.3 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 20/110 (18%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
            F+   +    + +  L+        + +  +      A         N RLS  R    
Sbjct: 291 FFNIGKATLDKKELTNLEFYVNNAIKADKNKTFTLIGSADSATGSKELNQRLSEQRMEYV 350

Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANR-------RIDIL 337
           Y +L++   +S +R+ K         K   D     NR       R+ I+
Sbjct: 351 YNLLVEKYKISPERLVK---------KAEGDTN---NRFSEPELNRVVIV 388


>gi|224024901|ref|ZP_03643267.1| hypothetical protein BACCOPRO_01632 [Bacteroides coprophilus DSM
           18228]
 gi|224018137|gb|EEF76135.1| hypothetical protein BACCOPRO_01632 [Bacteroides coprophilus DSM
           18228]
          Length = 502

 Score = 39.9 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F  +S+    E+    +  +  V       + + G  D       +  N  LSL
Sbjct: 385 SPVYFFFYLNSAQLTDESQSINIDALARVAVKYNLSVRVTGAADEE--TGTSAVNDSLSL 442

Query: 290 DRAYSAYQVLMKSGVSEDRIS--KISGFAHHRLKIASDPMNSANRRIDIL 337
            RA      L++ GVS  +I      G + +  + A+      N ++++L
Sbjct: 443 KRANYISDQLLQRGVSSGKIVVDSKGGISDYSPREAN-----RNTKVELL 487


>gi|320158138|ref|YP_004190516.1| membrane protein [Vibrio vulnificus MO6-24/O]
 gi|319933450|gb|ADV88313.1| membrane protein [Vibrio vulnificus MO6-24/O]
          Length = 204

 Score = 39.9 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           I       T  F+   +    +      ++  +L   TE   I      +        N 
Sbjct: 68  IYQKVDIKTVYFNFDDAHIRLDQSSEFDELLAILNQGTEAKVIL--VGDTSPEGSNEYNQ 125

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK 311
            L+  R     + L+++G++ +RIS+
Sbjct: 126 VLAKKRTSVLKEALIENGIAPERISE 151


>gi|149919297|ref|ZP_01907779.1| adenylylsulfate kinase [Plesiocystis pacifica SIR-1]
 gi|149819797|gb|EDM79221.1| adenylylsulfate kinase [Plesiocystis pacifica SIR-1]
          Length = 605

 Score = 39.9 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/237 (10%), Positives = 61/237 (25%), Gaps = 20/237 (8%)

Query: 78  TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137
                IF+ + P             +      +           + ++ +E     L ++
Sbjct: 103 GGHARIFELELPAPPGPATDDTPIDEGPGLAQAAPPPTQLRVLDRWHRPVEALTLALPST 162

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
            ++              +  C ++ +     +         + ++       +       
Sbjct: 163 PEAASDMGGGVALGSDEQGACSASLVTVEDARWAPEPAEDEAPQEPPEGIAVQTRTLRLS 222

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL----- 252
             S      VA ++ +       R  +   +  Q  +   D  S + +P     L     
Sbjct: 223 GASWEPEAAVALHLARMNWLVLERPVVERLVPAQARS---DHGSGLSVPGPWTQLEGEDN 279

Query: 253 ---------QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                      +  +L      + + GH  A      A+ N  LS  RA     +L 
Sbjct: 280 PRHPLAPFVHGLRRLLDEPGAQLLVVGHASAD---GGAKANQALSEARAAGFRHLLE 333


>gi|260175097|ref|ZP_05761509.1| outer membrane porin F precursor [Bacteroides sp. D2]
 gi|315923328|ref|ZP_07919568.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697203|gb|EFS34038.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 389

 Score = 39.9 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 26/178 (14%)

Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227
           N+ E       S         + +  DL+ +     + L A    K  +   ++      
Sbjct: 229 NRVEKVAPADYSSYNERINALRAKNHDLSTEAQRLAAELEAARNRKPEVVNESK------ 282

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +        F    +    + +  L+        + +  +      A         N RL
Sbjct: 283 VTASPVALFFHIGKATLDKKELTNLEFYVNNAIKADKNKTFTLIGSADSATGSKELNQRL 342

Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANR-------RIDIL 337
           S  R    Y +L++   +S +R+ K         K   D     NR       R+ I+
Sbjct: 343 SEQRMEYVYNLLVEKYKISPERLVK---------KAEGDTN---NRFSEPELNRVVIV 388


>gi|153833397|ref|ZP_01986064.1| putative chemotaxis protein MotB [Vibrio harveyi HY01]
 gi|148870285|gb|EDL69215.1| putative chemotaxis protein MotB [Vibrio harveyi HY01]
          Length = 219

 Score = 39.9 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 32/116 (27%), Gaps = 16/116 (13%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++        + G+       G+  +       ISI D     +FD       P     L
Sbjct: 49  EESQNTRVVIIKGINDALNAAGIEVKADPDTGDISITDS---ILFDLDDYRLKPSGKEFL 105

Query: 253 QKIGEVLAHSTEVIS----------IRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
            K   + +                 I GH+ +         N  LS+ RA S    
Sbjct: 106 NKFIPIYSDVVFQSKATADEVSRIVIEGHSSSE---GSFNRNMELSVLRANSVTAF 158


>gi|21241580|ref|NP_641162.1| hypothetical protein XAC0810 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106935|gb|AAM35698.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 51

 Score = 39.9 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 10/35 (28%), Gaps = 7/35 (20%)

Query: 312 ISGFAHHRLKIASD-------PMNSANRRIDILVE 339
             G    +    +             NRR++I + 
Sbjct: 16  AKGHGESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 50


>gi|256425936|ref|YP_003126589.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256040844|gb|ACU64388.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 514

 Score = 39.9 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 60/208 (28%), Gaps = 8/208 (3%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
           T   ++  +G+++++ +     N + Y  N   +       T           +   ++ 
Sbjct: 294 TSVRLNFNLGNSSKRVEPLWWVNPLNYAYNELSAPRHMKLPTPVLPDADGDGVTDQFDRE 353

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226
            N      +      K          +D      +    + AD + K    E  +    +
Sbjct: 354 PNTPAGAPVDVHGVAKDTDGDGVPDYKDKQLVTPTYCQPVDADGVGKCPDPECCKNIAPV 413

Query: 227 SIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283
           +       P   F  SS+    +   +L  +   L  +      + GH  A   +     
Sbjct: 414 ANCATLVLPSVSFKGSSTKVASDNEAILASVAATLKGAPSCNILVTGHAGAKGKKGG--- 470

Query: 284 NWRLSLDRAYSAYQVLM-KSGVSEDRIS 310
              LS  R  +    L  K G+   R  
Sbjct: 471 -VDLSSRRVDAVIDYLADKQGIDRGRFI 497


>gi|148554194|ref|YP_001261776.1| hypothetical protein Swit_1273 [Sphingomonas wittichii RW1]
 gi|148499384|gb|ABQ67638.1| hypothetical protein Swit_1273 [Sphingomonas wittichii RW1]
          Length = 166

 Score = 39.9 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 39/156 (25%), Gaps = 4/156 (2%)

Query: 32  SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
            W + +AD   +L+AFF++M    A     +  +                   D Q    
Sbjct: 8   RWVLSFADLTLLLLAFFVLMQAQAA----DRLKLAAGIRDAFGGDGADGASRNDVQGFTA 63

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            +     +  +     +    +   +     +           S    S     +    +
Sbjct: 64  AAIFESGEAILKPGALQRLRAIGAAAARTGARVVVASQGRDGQSARLDSWELAAARATAT 123

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187
            +       +D    I         P   ++I   +
Sbjct: 124 ARAIRSGGLSDARIEITLPPMRASEPAKGQRISVQR 159


>gi|326319509|ref|YP_004237181.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323376345|gb|ADX48614.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 157

 Score = 39.9 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285
           + I D      F    +     T  +L  +    A +++   I+G+ D    +N      
Sbjct: 60  VRIPDDGTVAEFSGLETELPASTAELLDALTADKAAASQRWEIKGYADRKVTKNAR---- 115

Query: 286 RLSLDRAYSAYQVLMKSGVSEDRI 309
           +++L RA +  + L+  GV    +
Sbjct: 116 QIALARALAVRKELVARGVPAQNL 139


>gi|325298797|ref|YP_004258714.1| hypothetical protein Bacsa_1678 [Bacteroides salanitronis DSM
           18170]
 gi|324318350|gb|ADY36241.1| hypothetical protein Bacsa_1678 [Bacteroides salanitronis DSM
           18170]
          Length = 490

 Score = 39.9 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/225 (8%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
             +  S D    K    + +    ++K Y R     +  + +      +       +   
Sbjct: 65  TPVLQSADGQTEKELAPVIVNGRIRQKVYDREIALGYAEAEAGPYAVVRRKNDTSQQLDY 124

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA--KKISSTLSGLVADNIVK 213
           ++    +                     ++   +     L   + +    + +  +   +
Sbjct: 125 EVSVPYERWMRGASLVLREEAEGCASCQMSEYERPLCTVLPVVQVVEPAYAAVYVEPRAE 184

Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHT 272
            V     +  + ++    R+  + +  ++    + +  +    E     T     I G+ 
Sbjct: 185 EVKRRDEQCELHLNYRVGRSEVLPNLGNNQEELKRLQDMADRVEANNDFTLTGFRITGYA 244

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N  LS  RA +      ++   + ++        
Sbjct: 245 SPE---GSYKSNMTLSERRAKALADYFRRTNNWDRKLFSTDWKGE 286


>gi|332881531|ref|ZP_08449180.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680529|gb|EGJ53477.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 393

 Score = 39.9 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 44/159 (27%), Gaps = 15/159 (9%)

Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214
                      +        +    +       + +  +  +  +   L           
Sbjct: 223 AYDASEVSALNATINNLRQDVNSKDESMRNTANKLRNEEQKSADLERALKECQNQGPKVI 282

Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273
              + T   ++           F +   +        +++I   L +  E  ++I G+  
Sbjct: 283 TNNKKTLESVVT----------FRQGKIVIDASQQPNVERIATYLKNHKEAKVNILGYAS 332

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311
                  A  N R++  RA +   +L+ K  +   RI+ 
Sbjct: 333 PE---GSAEVNERIANQRAEAVKNMLVNKYRIDARRITA 368


>gi|167644059|ref|YP_001681722.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
 gi|167346489|gb|ABZ69224.1| OmpA/MotB domain protein [Caulobacter sp. K31]
          Length = 156

 Score = 39.9 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 4/108 (3%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288
           D      F+  S+    E   VL+  G +          + G +DA      +  N  LS
Sbjct: 43  DFAVQIYFETESAALTNEARSVLKGAGALAKGCKVASARVIGLSDA--VGGGSNSNLALS 100

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336
             RA +    L K G   D   ++          +        RR DI
Sbjct: 101 RKRADTVKAALDKIGF-RDVAFEVGAAGDAGATTSGGEARPLRRRADI 147


>gi|317013503|gb|ADU80939.1| outer membrane protein (omp3) [Helicobacter pylori Gambia94/24]
          Length = 602

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 58/163 (35%), Gaps = 2/163 (1%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT- 107
           +++  +NATD +T  A+++  + F      ++KG     + P +        S  + +T 
Sbjct: 18  VLLGSMNATDLETYAALQKPSHVFSNYAKKSNKGSELSSDLPTQQQAQNTASSDSQEVTT 77

Query: 108 -KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
            +N+      +    + Y +  +     +  Q         + D+     + +  +  K+
Sbjct: 78  LENTATTDSQTATTDQTYTKSTDTTVADAAKQVETDNTAVQSADTALQSAVTQVENDAKA 137

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209
            N +E  F      E+      +K    L    ++  + L   
Sbjct: 138 TNFDEKTFESDQQAEQTAEANLQKAENQLTNDQNALETALKDQ 180


>gi|82703792|ref|YP_413358.1| hypothetical protein Nmul_A2679 [Nitrosospira multiformis ATCC 25196]
 gi|82411857|gb|ABB75966.1| Protein of unknown function DUF748 [Nitrosospira multiformis ATCC
            25196]
          Length = 1065

 Score = 39.6 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 10/58 (17%)

Query: 285  WRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
              L+  RA SA   L++ G + + RI  +S       K+ +        N R++  + 
Sbjct: 1015 QELAESRAVSARDWLIQQGKIPDARIFVLS------PKVEAGTNREKAGN-RVEFSLR 1065


>gi|254420591|ref|ZP_05034315.1| OmpA family protein [Brevundimonas sp. BAL3]
 gi|196186768|gb|EDX81744.1| OmpA family protein [Brevundimonas sp. BAL3]
          Length = 148

 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F ++ +         +     VL       I + G  DA+     +  N  LS  RA + 
Sbjct: 44  FRENEARLTDAADQAIDAAAGVLRTCDVRSIQVVGLADAT---GASEANLSLSQRRARTV 100

Query: 296 YQVLMKSGVSE 306
            Q L  +G+  
Sbjct: 101 AQALNAAGLPS 111


>gi|329960607|ref|ZP_08298950.1| OmpA family protein [Bacteroides fluxus YIT 12057]
 gi|328532480|gb|EGF59274.1| OmpA family protein [Bacteroides fluxus YIT 12057]
          Length = 377

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
           + + +++     N  +  L  +   + K+ +   + A  +   LS       +   + E 
Sbjct: 210 AKEYDQAEVDRLNTDINNLRSQLSNSRKQIEDASNRADMLQKQLSECQNKKPIIETIVEK 269

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278
            +T   I          F + SS      +  +++I   +    E   + +G++      
Sbjct: 270 AKTLESI--------VTFRQGSSKIDASQLPNVERIASYMNRHPESKVVIKGYSSPE--- 318

Query: 279 NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK-ISGFAH 317
                N R++  RA S   VL K   ++  RI+    G   
Sbjct: 319 GSIEVNERIARARAESVKSVLTKKYRIAASRITAEGQGIGD 359


>gi|296100936|ref|YP_003611082.1| N-acetylmuramoyl-l-alanine amidase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055395|gb|ADF60133.1| N-acetylmuramoyl-l-alanine amidase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 436

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 66/259 (25%), Gaps = 13/259 (5%)

Query: 52  WIINATDDD------TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105
           +  +  D         +  + Q   P   +     K I        +S +  +DL+    
Sbjct: 40  YAFSQPDSRSVALDIKQTGVIQGL-PLQFSGNNLVKSIRSGTPKDSQSLRLVVDLTEKGK 98

Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165
                       T                    +         R SE  ++  K+ +   
Sbjct: 99  TRAVKQQNGANYTVVFTINADAPPPPPPPPVVAKRVEEPVYTPRPSEPARNPFKTDNDRI 158

Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225
           +     N    P +  + +    K  +   A         +      +  +       + 
Sbjct: 159 TGVTSSNTVTRPAASARRVVSSDKVIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLR 218

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284
             + D    PMF         +  + +    +V         +  H DA+P RN      
Sbjct: 219 TLLNDD---PMFK-GVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRNATGASV 274

Query: 285 WRLSLDRAYS-AYQVLMKS 302
           W LS  RA S     L + 
Sbjct: 275 WVLSNRRANSEMANWLEEH 293


>gi|300796633|ref|NP_001178726.1| nik-related protein kinase [Rattus norvegicus]
          Length = 1454

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 68/272 (25%), Gaps = 24/272 (8%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              +   + F P      T        Q P       ++ + +    T  +   K     
Sbjct: 390 QQLQEAARMFMPLHSQDKTLKPLQKQAQLPQHLHVAPQVLMPVQVEATVATPLAKKIRAP 449

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +              +++ S     +     ++ ++    T+  + +++    F     
Sbjct: 450 PQLSKAAWGLTSPPSQDNKASSPEVQAPIPREQQAQNDALETEQPEDLDQVPEEFQGQDR 509

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +     +    +     +         +     V  E                     
Sbjct: 510 AAEEQRQGQAAEQEQRQNGVPEQHPEENREPEQAEVQEEAVEPP--------------QA 555

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN--------WRLSLDR 291
                 PE I V  ++   L      + +  H D      +   N        W L   R
Sbjct: 556 EVEEKDPEVIQVHARVFLPLQSQNHHVFLPLHLDTQLLIPVGEQNEEAPRAQAWDLEASR 615

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           A  A Q L++ G+S D +   + F   +    
Sbjct: 616 AAGAVQALVE-GLSRDLLRAPNAF-TSKPLGP 645


>gi|293351112|ref|XP_001055951.2| PREDICTED: Nik related kinase [Rattus norvegicus]
          Length = 1471

 Score = 39.6 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 68/272 (25%), Gaps = 24/272 (8%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              +   + F P      T        Q P       ++ + +    T  +   K     
Sbjct: 407 QQLQEAARMFMPLHSQDKTLKPLQKQAQLPQHLHVAPQVLMPVQVEATVATPLAKKIRAP 466

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +              +++ S     +     ++ ++    T+  + +++    F     
Sbjct: 467 PQLSKAAWGLTSPPSQDNKASSPEVQAPIPREQQAQNDALETEQPEDLDQVPEEFQGQDR 526

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +     +    +     +         +     V  E                     
Sbjct: 527 AAEEQRQGQAAEQEQRQNGVPEQHPEENREPEQAEVQEEAVEPP--------------QA 572

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN--------WRLSLDR 291
                 PE I V  ++   L      + +  H D      +   N        W L   R
Sbjct: 573 EVEEKDPEVIQVHARVFLPLQSQNHHVFLPLHLDTQLLIPVGEQNEEAPRAQAWDLEASR 632

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           A  A Q L++ G+S D +   + F   +    
Sbjct: 633 AAGAVQALVE-GLSRDLLRAPNAF-TSKPLGP 662


>gi|229841583|ref|ZP_04461741.1| Outer membrane protein A precursor [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229694046|gb|EEO84094.1| Outer membrane protein A precursor [Yersinia pestis biovar
           Orientalis str. PEXU2]
          Length = 66

 Score = 39.6 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 12/57 (21%)

Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDILVED 340
               L+  G+  D+I+   G         +      P  +       +RR++I V+ 
Sbjct: 1   MRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVKG 56


>gi|53713414|ref|YP_099406.1| hypothetical protein BF2125 [Bacteroides fragilis YCH46]
 gi|52216279|dbj|BAD48872.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 486

 Score = 39.6 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  ++ +  +     
Sbjct: 239 FRVTGYASPE---GNYSRNMKLSENRALAFVGYLQNHGGVDESLLTVDWKGE 287


>gi|295087269|emb|CBK68792.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Bacteroides xylanisolvens XB1A]
          Length = 400

 Score = 39.6 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLD 290
           N   F  + +    E    L  + E++       V +I G+ DA      ++ N RLS +
Sbjct: 296 NLVTFKINKTKLSNEARADLGLLAEIIKSGDPETVYTITGYADA--GTGSSKGNERLSKE 353

Query: 291 RAYSAYQVLMKS-GVSEDRI 309
           RA + Y  L+K  GVSE ++
Sbjct: 354 RAENVYNCLVKEFGVSEKQL 373


>gi|265763680|ref|ZP_06092248.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256288|gb|EEZ27634.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 483

 Score = 39.6 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  ++ +  +     
Sbjct: 236 FRVTGYASPE---GNYSRNMKLSENRALAFVGYLQNHGGVDESLLTVDWKGE 284


>gi|153808387|ref|ZP_01961055.1| hypothetical protein BACCAC_02681 [Bacteroides caccae ATCC 43185]
 gi|149129290|gb|EDM20506.1| hypothetical protein BACCAC_02681 [Bacteroides caccae ATCC 43185]
          Length = 381

 Score = 39.6 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 10/162 (6%)

Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220
           ++ E    K   Y             + +  L+     +      ++             
Sbjct: 203 SNGEHHFTKVRPYDQSEFDALNAQINQLRSELERNDNVLQDANQKVIDLETALEEYKNRE 262

Query: 221 RTGILISIIDQ----RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDAS 275
              +  +I +      +   F +         +  +++I   L +  E   +  G+    
Sbjct: 263 PKIVKDTIDNSKKTLESVITFRQGRITIDNSQLPNVERIAIYLRNHKEAGVVIKGYASPE 322

Query: 276 PFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316
                   N R++  RA    ++L+ K G+S++RI    G  
Sbjct: 323 ---GSEELNERIARQRAEVVQKMLVNKYGISKERIVA-EGQG 360


>gi|265762998|ref|ZP_06091566.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255606|gb|EEZ26952.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 482

 Score = 39.2 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/285 (8%), Positives = 75/285 (26%), Gaps = 24/285 (8%)

Query: 44  LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103
           L+A  +VM                  +         S  +  + +    +   +  L++ 
Sbjct: 9   LLALAVVM----PASAQNFFKDAISLSDVSLWQQGNSLYVDMKIDMKNLTVSPERMLTLT 64

Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163
             +T    ++ +       + ++         + +          +            + 
Sbjct: 65  PLLTDGQHNVALEEIIINGKRRQKAYLRGLAISRELPAGIVIPYNKREVLNYTQVIPYEP 124

Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223
             +                   + ++    D++ +     +      ++  V +      
Sbjct: 125 WMANASLNLVENLCGCGNNEEMLAQELITNDVSTEAKRLSA------MIPVVAYIQPTVE 178

Query: 224 ILISIIDQRNTPM-FDKSSSIPLPETIVV---LQKIGEVLAHSTEVIS-------IRGHT 272
           ++ +  +Q    + F  S ++  PE +     L  I  +        +       I G  
Sbjct: 179 VVKNRSEQYEAHLDFPVSKAVIQPEFMNNHKELMNIHAMFDKIQNDKNLTVTGISIEGFA 238

Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
                    + N +LS  RA +    L  +     ++ K++    
Sbjct: 239 SPE---GPLKFNEQLSQKRAEALKNYLTTNEKVPGKLYKVTFGGE 280


>gi|119510179|ref|ZP_01629317.1| hypothetical protein N9414_10353 [Nodularia spumigena CCY9414]
 gi|119465129|gb|EAW46028.1| hypothetical protein N9414_10353 [Nodularia spumigena CCY9414]
          Length = 244

 Score = 39.2 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 43/147 (29%), Gaps = 37/147 (25%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIG------EVLAHSTEVISIRGHTDASPFRNIAR-- 282
                 F   S+    +    + +            +   V+ I GHTD  P  N+A   
Sbjct: 90  DEGDYRFASGSADIPEKMSTYIFRQIVPEIEARTKQYGINVVEIIGHTDGQPNGNVASNL 149

Query: 283 --------------------DNWRLSLDRAYSAYQVLMKSGVSEDRIS--KISGFAHHRL 320
                                N  L L RA S  +VL      E R+S      ++  +L
Sbjct: 150 DVNLEKVVGGSLPVGKLQAGSNADLGLMRALSVVKVLHDIQKKEGRLSGLSFRAYSAAQL 209

Query: 321 KIASDPMN--SAN-----RRIDILVED 340
            + +      +       RRI+I    
Sbjct: 210 ILPNGQFASIARKEDVTRRRIEIRFTR 236


>gi|83745697|ref|ZP_00942755.1| Hypothetical Protein RRSL_04763 [Ralstonia solanacearum UW551]
 gi|207738699|ref|YP_002257092.1| lipoprotein [Ralstonia solanacearum IPO1609]
 gi|83727774|gb|EAP74894.1| Hypothetical Protein RRSL_04763 [Ralstonia solanacearum UW551]
 gi|206592067|emb|CAQ58973.1| lipoprotein [Ralstonia solanacearum IPO1609]
          Length = 337

 Score = 39.2 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 10/88 (11%)

Query: 237 FDKSSSIPLPETIVVLQ-----KIGEVLAHSTEVISIRGHTDASPFRNI----ARDNWRL 287
           F+   +   P     ++                ++ + G TD     +        N  L
Sbjct: 218 FESGRADVRPHMGETIRAVCDKWRAHGDRGQHGLLLVIGSTDRVRLSSTSATQYESNVGL 277

Query: 288 SLDRAYSAYQVLMKSGVSEDRISK-ISG 314
           +  RA      L+   +   ++   +SG
Sbjct: 278 ARARAEQVKARLLDCSIPTGQMVTMVSG 305


>gi|253565402|ref|ZP_04842857.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945681|gb|EES86088.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 483

 Score = 39.2 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  ++ +  +     
Sbjct: 236 FRVTGYASPE---GNYSRNMKLSENRALAFVGYLQNHGGVDESLLTVDWKGE 284


>gi|60681662|ref|YP_211806.1| hypothetical protein BF2183 [Bacteroides fragilis NCTC 9343]
 gi|60493096|emb|CAH07877.1| putative exported protein [Bacteroides fragilis NCTC 9343]
 gi|301163205|emb|CBW22755.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 483

 Score = 39.2 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  ++ +  +     
Sbjct: 236 FRVTGYASPE---GNYSRNMKLSENRALAFVGYLQNHGGVDESLLTVDWKGE 284


>gi|319644013|ref|ZP_07998572.1| hypothetical protein HMPREF9011_04175 [Bacteroides sp. 3_1_40A]
 gi|317384361|gb|EFV65329.1| hypothetical protein HMPREF9011_04175 [Bacteroides sp. 3_1_40A]
          Length = 466

 Score = 39.2 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 5/97 (5%)

Query: 231 QRNTPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                 F+ +++     + +  L ++  V       + + G  D+S        N  LS 
Sbjct: 363 SPVYFFFNLNTAHLTDASQMLNLDELARVAKKYGLSLRVTGAADSS--TGTPVLNGSLSA 420

Query: 290 DRAYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324
            R       L K G+  +RI K S  G A H    A+
Sbjct: 421 SRTDYIVTELEKRGIPIERIVKTSRGGIADHVPVEAN 457


>gi|260175476|ref|ZP_05761888.1| hypothetical protein BacD2_26709 [Bacteroides sp. D2]
 gi|315923704|ref|ZP_07919944.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697579|gb|EFS34414.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 401

 Score = 39.2 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 9/89 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRNIA---RDNWRLSL 289
           F    S    +       +   +    E+I     +  H     + +       N RLS 
Sbjct: 42  FKTGKSNLDLDYNGNRGTLQRCIDRVQEIIDKNEYVIDHIRIIGYASPEGPLALNLRLSA 101

Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAH 317
            RA      L+   G+S +    ++G   
Sbjct: 102 ARADVLKDYLVAKTGLSSNLFEVVAG-GE 129


>gi|189425754|ref|YP_001952931.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
 gi|189422013|gb|ACD96411.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
          Length = 370

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 90/287 (31%), Gaps = 12/287 (4%)

Query: 55  NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
                       +         +       ++       +  K  + + + +      LK
Sbjct: 88  AEPTVRYLAEAARLQAAVLLARIGKQDQDKEKSRLDGLITVTKAKIKVFDDLVAQVKALK 147

Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
             S +Q  Q   L   +  L+    ++    + +   +K  +L K+ D +K         
Sbjct: 148 KQSADQTNQITSLNAKVASLTAELSAKGSVITSS--DQKTGELLKALDEQKKATASSEQR 205

Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234
           +  L++E     ++  +LQ   +++++       +  V  +      T   +S+   R+ 
Sbjct: 206 VAALTQELEGLKQQTAQLQATGEQLAAEKRIKAFEAEVGKLGGIVKSTSAGLSVTFPRSQ 265

Query: 235 PMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLD 290
            +     S+    +    + K+ E++    E      + G    S   + A  +      
Sbjct: 266 LLKVTGKSTTLTADGDKQIVKLAELVRTYPEYRIKLRVHGFGQPSRHEDAAATDHM---- 321

Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337
            A    + L+  G  E    +  G            +   NRR++I+
Sbjct: 322 -ARFIREGLLTKGKLEQATVEALGVGAAEPVYPKGNIEG-NRRVEII 366


>gi|302876037|ref|YP_003844670.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307686755|ref|ZP_07629201.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302578894|gb|ADL52906.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
          Length = 234

 Score = 39.2 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 19/124 (15%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
               +   DL   I S LS   A+   + + F+ +   I+I     +    FD       
Sbjct: 48  EDTAEERADLYVNIESALSQQQAN--PEVIDFDKSEGRIII-----KTESFFDLGQFTLK 100

Query: 246 PETIVVLQKIGE---------VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
            E I     + E          + ++ + I + GHTD   +     DN  LS  RA S  
Sbjct: 101 EEGINTANMLNEVFSKLLKDKNIENAIQYIEVVGHTD---YIGNTIDNRELSTQRAVSFL 157

Query: 297 QVLM 300
             +M
Sbjct: 158 NAMM 161


>gi|73542619|ref|YP_297139.1| hypothetical protein Reut_A2935 [Ralstonia eutropha JMP134]
 gi|72120032|gb|AAZ62295.1| hypothetical protein Reut_A2935 [Ralstonia eutropha JMP134]
          Length = 165

 Score = 39.2 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 9/90 (10%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
           F   SS       + L      L     + E + I GH D        + + RL+ DRA 
Sbjct: 44  FPVESSALDTAQALRLGSWIADLKSSFPNYERVFIAGHVDE-----SEKGDKRLAHDRAD 98

Query: 294 SAYQVLMKSGVSEDRI-SKISGFAHHRLKI 322
           +  + L   G    RI  +  G ++++   
Sbjct: 99  TVRRFLADRGFGIARIHIEELGTSYNKPIA 128


>gi|307307915|ref|ZP_07587640.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
 gi|306901531|gb|EFN32134.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
          Length = 360

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                 K++     + K  +D  K + + L+   ++ + K            I  + + +
Sbjct: 153 AAESALKDRQNLAAQLKDAEDRRKLLETLLANAESE-LSKFQKTSKPHEWPPIISLSEAS 211

Query: 234 TPMFDKSSSIPLPETIVVLQ-----KIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR- 286
              F   S+    +  V L      +I + L     +++ + GHTD  P       N   
Sbjct: 212 GYYFRSGSAELTDKFTVDLNGSISTQIADNLKRYGVDIVEVIGHTDEQPLA-RPNSNMDK 270

Query: 287 ----------------------LSLDRAYSAYQVLMKS 302
                                 L L RA S   +L  +
Sbjct: 271 LSIGVVSSKTPITELVPADNAGLGLARAISVANILRAN 308


>gi|166368621|ref|YP_001660894.1| hypothetical protein MAE_58800 [Microcystis aeruginosa NIES-843]
 gi|166090994|dbj|BAG05702.1| hypothetical protein MAE_58800 [Microcystis aeruginosa NIES-843]
          Length = 185

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 40/147 (27%)

Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST------EVISIRGHTDASPFRN 279
           I I ++     F   S+   P     +++       +       + I + GHTD    + 
Sbjct: 34  IVIDEKSGKFKFQSGSAELNPALKTYIRQRIIPAIETITKDREIDFIQVIGHTDGQGIQK 93

Query: 280 IAR---------------------DNWRLSLDRAYSAYQVLMKSG---------VSEDRI 309
            +                       N  L L RA +  Q +  +G          S  ++
Sbjct: 94  TSNLDKNIESVASRKQSVKMLVPGSNTDLGLMRALAVVQEIENTGKLKNVKFRAFSAGQL 153

Query: 310 SKISGFAHHRLKIASDPMNSANRRIDI 336
              SG     L   +   +++ RRI+I
Sbjct: 154 YLPSG----NLAAVNRDADASRRRIEI 176


>gi|291514294|emb|CBK63504.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Alistipes shahii WAL 8301]
          Length = 490

 Score = 39.2 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303
             P  +V L ++  V       + + G  D+         N  LS+ RA      L K G
Sbjct: 391 TDPSQLVNLDELVRVATKYGLTVKVTGAADS--ATGTVGINDALSVSRADYIASELNKRG 448

Query: 304 VSEDRISKI--SGFAHHRLKIAS 324
           +  DRI+K    G + +    A+
Sbjct: 449 LPSDRITKTGEGGISDYVPTEAN 471


>gi|83950725|ref|ZP_00959458.1| OmpA domain protein [Roseovarius nubinhibens ISM]
 gi|83838624|gb|EAP77920.1| OmpA domain protein [Roseovarius nubinhibens ISM]
          Length = 493

 Score = 39.2 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 46/168 (27%), Gaps = 18/168 (10%)

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
            +    +    +    A  +      +  +++ + V   T    +  +         F+ 
Sbjct: 336 DQLPEEIAIDAQGDRFANAVLRAGEDVSLEDLQQMVRVLTPLKRLTTTFR-------FEP 388

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR------AY 293
            S+    ++   + ++ + L               S     A  N ++   R        
Sbjct: 389 GSARLDAQSRSNVTQLAQALERGLYDTRRLVFVGFSDGDGPAGPNRQI--ARKRAAAVRE 446

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339
           +       + +S  RI     F         D       NRR+++ V 
Sbjct: 447 AVVAAAETANLSRLRIET-QAFGEAMPMACDDSEWGRRANRRVEVWVR 493


>gi|325576632|ref|ZP_08147350.1| hypothetical protein HMPREF9417_0091 [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325161195|gb|EGC73310.1| hypothetical protein HMPREF9417_0091 [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 223

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 237 FDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           FD+ +          +     +    S + I+I G TD  P++     N +LS  RA S 
Sbjct: 110 FDEGAYHIQDSAKKEVDDFVLKYPKESIKEITIYGLTDLKPYKKGG--NKKLSEKRAESV 167

Query: 296 YQVLMK 301
            Q + +
Sbjct: 168 VQYIKE 173


>gi|253570228|ref|ZP_04847637.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840609|gb|EES68691.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 129

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
          W   YAD MT L    +V++II+  +     A
Sbjct: 10 W-ASYADLMTSLFFLMVVLFIISIVELKQIDA 40


>gi|327482017|gb|AEA85327.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 962

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 58/210 (27%), Gaps = 13/210 (6%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           D   +   +  +       +  Q     I  L+    ++    +    S +     + T 
Sbjct: 738 DPEFSVMPIVWQTLRNLVVRAAQAPFKFIAGLAGGGDADLSHVAFASASSELDGNARKTL 797

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTR 221
              +    E   L    +    A      L +  +++           + +         
Sbjct: 798 DTLAAALVERPALRLEVEGMANAAIDGPMLAE--QRLQQEFRETQYRILQRRGDKVPPDP 855

Query: 222 TGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
           + I I   D+      ++    +   P     L       A       I   +D +    
Sbjct: 856 SEIRIETSDEAPLLEGIYRSRINQQPPAEWKELDDEQR--AERLRQAVIDSWSDNAALL- 912

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
                 RLS +RA +    L+ +G+  +R+
Sbjct: 913 -----RRLSRERAAAIKGYLVDAGLESERV 937


>gi|144898368|emb|CAM75232.1| secreted protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 275

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 60/204 (29%), Gaps = 1/204 (0%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
                     +    + +  Q          +  ++ ++        +  +  K  ++ K
Sbjct: 41  SKPAAKPPAATGKPAVPAKPQIADVAPAPVALAPVAPAKVPPVSPPEVKAEPPKPVEIAK 100

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
             ++ K + + +   +    +    A       Q L   +   +S      +   V    
Sbjct: 101 PVEVPKPLEQPKPVEIVKPVELPKPAPVVAAAPQPLLSPVPPAVSMPPQPVVPPQVAALP 160

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
           +     +S      +  FD   +         L  + + +    + ++++    AS    
Sbjct: 161 SSEPPAMSGGSDTISLAFDAEDAKVSDRARNDLVTLVKRMQKDED-LNLQLLAYASGDEA 219

Query: 280 IARDNWRLSLDRAYSAYQVLMKSG 303
            A    RLSL RA    + LM  G
Sbjct: 220 SASKARRLSLSRALEVRKYLMDKG 243


>gi|212692356|ref|ZP_03300484.1| hypothetical protein BACDOR_01852 [Bacteroides dorei DSM 17855]
 gi|212665233|gb|EEB25805.1| hypothetical protein BACDOR_01852 [Bacteroides dorei DSM 17855]
          Length = 250

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64
          W   YAD MT L    +V++II+  +     A
Sbjct: 10 W-ASYADLMTSLFFLMVVLFIISIVELKQIDA 40


>gi|149033203|gb|EDL88010.1| Nik related kinase (predicted) [Rattus norvegicus]
          Length = 713

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 68/272 (25%), Gaps = 24/272 (8%)

Query: 60  DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119
              +   + F P      T        Q P       ++ + +    T  +   K     
Sbjct: 407 QQLQEAARMFMPLHSQDKTLKPLQKQAQLPQHLHVAPQVLMPVQVEATVATPLAKKIRAP 466

Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179
            +              +++ S     +     ++ ++    T+  + +++    F     
Sbjct: 467 PQLSKAAWGLTSPPSQDNKASSPEVQAPIPREQQAQNDALETEQPEDLDQVPEEFQGQDR 526

Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239
             +     +    +     +         +     V  E                     
Sbjct: 527 AAEEQRQGQAAEQEQRQNGVPEQHPEENREPEQAEVQEEAVEPP--------------QA 572

Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN--------WRLSLDR 291
                 PE I V  ++   L      + +  H D      +   N        W L   R
Sbjct: 573 EVEEKDPEVIQVHARVFLPLQSQNHHVFLPLHLDTQLLIPVGEQNEEAPRAQAWDLEASR 632

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323
           A  A Q L++ G+S D +   + F   +    
Sbjct: 633 AAGAVQALVE-GLSRDLLRAPNAF-TSKPLGP 662


>gi|46200869|ref|ZP_00207877.1| COG3210: Large exoproteins involved in heme utilization or adhesion
           [Magnetospirillum magnetotacticum MS-1]
          Length = 986

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 12/74 (16%)

Query: 268 IRGHTDASPFRNIARDNW--RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324
           + G    + F      N    L+  R  +    L    GV   R+     F   R  + +
Sbjct: 922 LVGFERPADFYGPPDHNLLSALAQRRTNAVRDFLADKGGVDPGRL-----FGC-RPMVET 975

Query: 325 DPMNSANRRIDILV 338
                   R+++L+
Sbjct: 976 AEKGP---RVELLL 986


>gi|167946711|ref|ZP_02533785.1| hypothetical protein Epers_09238 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 36

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 17/36 (47%), Gaps = 3/36 (8%)

Query: 304 VSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337
           +  +++  +  +   R      ++   + NRR++++
Sbjct: 1   MDTNQLI-VISYGEERPASFANNEEAWALNRRVELV 35


>gi|194218089|ref|XP_001915009.1| PREDICTED: similar to 182 kDa tankyrase 1-binding protein [Equus
           caballus]
          Length = 1565

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/232 (9%), Positives = 58/232 (25%), Gaps = 9/232 (3%)

Query: 63  KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122
           +A   +      +            + P  +S+N    S       +             
Sbjct: 249 RAFNGHLAQPASSEPPTDVAKLWALSSPGPASENGGSASPGLATEVSDPAPGSPHLLSPH 308

Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182
           +     + +    +   +          +     L                 +P  ++ +
Sbjct: 309 ESSPRHSQLPETQSPAAAGASPCLPETPASPTAALPDEGSRHPPSPGLPAAGVPEAARTE 368

Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPM----F 237
              +++        +  +++   L A+  ++       +   +  S+ D  +  +    F
Sbjct: 369 SPLLEKVSGCHSSEQPPATSPQPLRAEGGLLDLARTLPSEEEVAKSVADLPHVGLAQRRF 428

Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
            +    P  +    L      L  +    S        PF N    NW LS 
Sbjct: 429 SEGVLQPPGQEQEKLGGSLAALPQTQGSQSAL----DRPFGNGTESNWSLSQ 476


>gi|224026166|ref|ZP_03644532.1| hypothetical protein BACCOPRO_02922 [Bacteroides coprophilus DSM
           18228]
 gi|224019402|gb|EEF77400.1| hypothetical protein BACCOPRO_02922 [Bacteroides coprophilus DSM
           18228]
          Length = 380

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F + S     +    +++I   + +     +SI+G             N R++  RA + 
Sbjct: 281 FRQGSVSISADQTPNVERIATYMKNHPKSTVSIKGFASPE---GKIEVNERIARQRAEAV 337

Query: 296 YQVLM-KSGVSEDRISK 311
             +L+ K  +   RI+ 
Sbjct: 338 KNMLVNKYKIDSKRITA 354


>gi|163749730|ref|ZP_02156976.1| hypothetical protein KT99_15145 [Shewanella benthica KT99]
 gi|161330543|gb|EDQ01501.1| hypothetical protein KT99_15145 [Shewanella benthica KT99]
          Length = 261

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 24/92 (26%), Gaps = 4/92 (4%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
           S    R    FD          I  L           E I +  + D        + N  
Sbjct: 121 SPHFTRLQLFFDFDQDQLNIGEIKRLTLWLNQFDSEPERIEVHAYADE---AGSQQYNEA 177

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           LS  R+ +  Q L +  +    +  +      
Sbjct: 178 LSHRRSLAITQCLQRLAIKPKELL-VIHHGER 208


>gi|329851647|ref|ZP_08266404.1| hypothetical protein ABI_44920 [Asticcacaulis biprosthecum C19]
 gi|328840493|gb|EGF90065.1| hypothetical protein ABI_44920 [Asticcacaulis biprosthecum C19]
          Length = 240

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDI 336
             RA    + L + GV   ++  +      +        D    + RR++I
Sbjct: 187 QARAERTVEWLTRMGVDP-KVIVVKTSGRPQPVADPIVGDLSAPSLRRVEI 236


>gi|163816540|ref|ZP_02207904.1| hypothetical protein COPEUT_02730 [Coprococcus eutactus ATCC 27759]
 gi|158448240|gb|EDP25235.1| hypothetical protein COPEUT_02730 [Coprococcus eutactus ATCC 27759]
          Length = 441

 Score = 38.8 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 35/82 (42%)

Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287
           +     +  F   S+  +      L+ +  V++++T          ++ + +     + L
Sbjct: 308 LCFNDVSLSFQPDSAELITSENEALKVLSPVISYATSQDVTIAVFASTAWSDDKEALYDL 367

Query: 288 SLDRAYSAYQVLMKSGVSEDRI 309
           S  RA +   +L+K+GV E+ I
Sbjct: 368 SSARANTVKTLLIKAGVQEESI 389


>gi|52143286|ref|YP_083544.1| hypothetical protein BCZK1952 [Bacillus cereus E33L]
 gi|51976755|gb|AAU18305.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 287

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 48/160 (30%), Gaps = 3/160 (1%)

Query: 37  YADFMTVLMAFFLVMWIINATDD---DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93
           +A    +L  FFLV+ I++         K+ I           +++      E+      
Sbjct: 66  FATLSLILFIFFLVLAILSVIKKTGVAKKQFIITAILFVIFVALSSISAPSSEKTTATSK 125

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
                     +   K     +     QK++ ++ +          +    +    +  E+
Sbjct: 126 KVASNTTEQKDSDKKELEKKEANEKTQKQEDEKRQAEEQARKQEDEKRLAEEQARKQQEE 185

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
            K L      ++   ++         +++    +  ++ +
Sbjct: 186 QKRLADEQARQQQEEQKRQADEQARQQQEEQKRQADEQAR 225


>gi|300790891|ref|YP_003771182.1| hypothetical protein AMED_9091 [Amycolatopsis mediterranei U32]
 gi|299800405|gb|ADJ50780.1| hypothetical protein AMED_9091 [Amycolatopsis mediterranei U32]
          Length = 377

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRN 279
            IS     +   F   S++  P  + +L+ +   +          V+++RG+  A P  +
Sbjct: 256 RISTTVSDSALGFTGDSAVLSPGALDLLRTLAGSITAALAGRPGAVVTVRGYA-ADPPGS 314

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANR 332
            A     L+  RA      L ++GV   R+    G    +            +   +A R
Sbjct: 315 TAAGRQALADLRAQVVSDALRQAGV-RQRVDAA-GVG-TQPDRTAMAGGRFDEAAAAAMR 371

Query: 333 RIDI 336
           R++I
Sbjct: 372 RVEI 375


>gi|217977705|ref|YP_002361852.1| nuclease [Methylocella silvestris BL2]
 gi|217503081|gb|ACK50490.1| nuclease [Methylocella silvestris BL2]
          Length = 355

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 67/269 (24%), Gaps = 38/269 (14%)

Query: 87  QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146
           Q   E  +   +   + E+        +   ++           +               
Sbjct: 62  QALIESDANAHVARLLQENPQLREALERRAGSSSPTAIDEFWRKLVDALAVTDELERNGL 121

Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206
              ++ K        +                S    +     ++    A  +++   G 
Sbjct: 122 SNENARKDAQFLAEAERLHMRGLVLKDAEANASLVAKIEAALGEQPVSEATILTAVEKGQ 181

Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI--GEVLAHSTE 264
             D +              I  + + +   F   S+   P+   VL       +L  + E
Sbjct: 182 FQDKMPP------GHRWPPIIKLSEADGYFFANGSAELEPKFKEVLHSSVVDSLLKTAKE 235

Query: 265 VI----SIRGHTDASPFRNIA----------------------RDNWRLSLDRAYSAYQV 298
                  + GHTD  P                            DN  L L RA +   V
Sbjct: 236 YDVDIIEVVGHTDEQPIAPRTSNLDKDLAFSIDHPDASARLRPADNAGLGLARAVAVVSV 295

Query: 299 L-MKSGVSEDRISKISGFAHHRLKIASDP 326
           L     +S  +I  +SG    +L   ++ 
Sbjct: 296 LSSDKRLSPYKILPLSG---AQLIQTNET 321


>gi|146283622|ref|YP_001173775.1| hypothetical protein PST_3302 [Pseudomonas stutzeri A1501]
 gi|145571827|gb|ABP80933.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 930

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 57/210 (27%), Gaps = 9/210 (4%)

Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162
           D   +   +  +       +  Q     I  L+    ++    +    S +     + T 
Sbjct: 724 DPEFSVMPIVWQTLRNLVVRAAQAPFKFIAGLAGGGDADLSHVAFAGASSELDGNARETL 783

Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTR 221
              +    E   L    +    A      L +  +++           + +         
Sbjct: 784 DTLAAALVERPALRLEVEGMANAAIDGPMLAE--QRLQQEFRETQYRILQRRGDKVPPDP 841

Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281
           + I I   ++         S +         +   E  A       I   +D +      
Sbjct: 842 SEIRIETSEEAPLLEGIYRSRLNQQPPAEWKELDDEQRAERMRQAVIDSWSDNAALL--- 898

Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
               RLS +RA +    L+ +G+  +R+  
Sbjct: 899 ---RRLSRERAAAIKGYLVDAGLESERVPA 925


>gi|91791046|ref|YP_551997.1| hypothetical protein Bpro_5238 [Polaromonas sp. JS666]
 gi|91700926|gb|ABE47099.1| hypothetical protein Bpro_5238 [Polaromonas sp. JS666]
          Length = 437

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 12/116 (10%)

Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254
           L+   +  L         KG       +   +S         F   ++   P+    L  
Sbjct: 157 LSFMSNDALEANSYATPAKGDRVTWKESETEVS----ERQVYFATGTAALGPQAKRALSN 212

Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
           +   +      I+I G  D+S           L   RA +    L+K G+S +RI+
Sbjct: 213 MSAQVKG-ATSITIVGRDDSSEKEG-------LEKARAENLRDALVKMGISGERIT 260


>gi|307293792|ref|ZP_07573636.1| flagellar motor protein [Sphingobium chlorophenolicum L-1]
 gi|306879943|gb|EFN11160.1| flagellar motor protein [Sphingobium chlorophenolicum L-1]
          Length = 161

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
           + R + +F    ++  P     L  +    A     + +   +  +       D+W L+ 
Sbjct: 60  EMRASELFLPGEALLTPAGEARLAALAGRFASGRTRLEVS--SQGTDPGRQRFDSWDLAA 117

Query: 290 DRAYSAYQVLMKSGVSEDRIS 310
            R  +  + L   GV  DR+ 
Sbjct: 118 ARLGAVARALKSHGVDRDRLV 138


>gi|254003195|ref|YP_003052661.1| hypothetical protein Msip34_2910 [Methylovorus sp. SIP3-4]
 gi|253987278|gb|ACT52134.1| hypothetical protein Msip34_2910 [Methylovorus sp. SIP3-4]
          Length = 308

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F     +  P  +  L+ I   L   ++ I+I+G  D++   +       L+  RA +  
Sbjct: 52  FYAQKYLLGPTAVAALKNIIGDL-QRSKAITIQGRPDSNGQNDT-----DLARRRALAIK 105

Query: 297 QVLMKSGVSEDRIS 310
           + L+ +G+SE RIS
Sbjct: 106 KYLVTNGISESRIS 119


>gi|17549788|ref|NP_523128.1| putative lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
 gi|17432043|emb|CAD18720.1| putative lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
          Length = 335

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 10/88 (11%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFR----NIARDNWRL 287
           F+   +   P     ++ + +      +        + G TD              N  L
Sbjct: 216 FESGRADVRPHMGETIRAVCDKWRAHGDRGQHGLLLVIGSTDRVRLSPTSATQYESNVGL 275

Query: 288 SLDRAYSAYQVLMKSGVSEDRISK-ISG 314
           +  RA      L+   +   ++   +SG
Sbjct: 276 ARARAEQVKARLLDCSIPTGQMVTMVSG 303


>gi|124003558|ref|ZP_01688407.1| hypothetical protein M23134_03217 [Microscilla marina ATCC 23134]
 gi|123991127|gb|EAY30579.1| hypothetical protein M23134_03217 [Microscilla marina ATCC 23134]
          Length = 326

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
             +  L+ +   KG+   +   G+ I+    R   +F K ++        +L ++ + L 
Sbjct: 196 ENVKSLLYEVNSKGMAVTSNSKGVQIN---CRRGVLFTKGTTAISSLGQNILVRLAKTLK 252

Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316
            S   + +R          I    W L+  R  +  + L+  G+   RI +++ F 
Sbjct: 253 SS---VKVRLAIAVPVRNGIDAGRWMLASARGRTMVEQLINRGIDPARI-EVNTFG 304


>gi|294013081|ref|YP_003546541.1| flagellar motor protein [Sphingobium japonicum UT26S]
 gi|292676411|dbj|BAI97929.1| flagellar motor protein [Sphingobium japonicum UT26S]
          Length = 160

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261
            L                   G     ++ R   +F    ++   +    L+ + +  A 
Sbjct: 31  MLQASGQRRDAVLAQVRQQFGGHAGRPMEIRAAELFLPGEAVLTEQGRKRLKVVADRFAL 90

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
             E + +   +  +   +   D W LS  R  +  + L   G+  DR+
Sbjct: 91  GRERLEVS--SRGTDAAHRRFDGWDLSAARLGAVARALKADGIGGDRL 136


>gi|157964015|ref|YP_001504049.1| outer membrane protein [Shewanella pealeana ATCC 700345]
 gi|157849015|gb|ABV89514.1| outer membrane protein [Shewanella pealeana ATCC 700345]
          Length = 198

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 40/159 (25%), Gaps = 19/159 (11%)

Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVA--DNIVKGVLFETTRTGILISIIDQRNTPM 236
           ++         +    L   I   ++            V+         +S+ +     M
Sbjct: 20  AETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVINNDGCPTSTVSVKEDFRVIM 79

Query: 237 FDKSSSIPLPE-TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295
           F        PE        I  ++   +  + + G T           N  L+  R    
Sbjct: 80  FGFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTS---VEGSEDYNHALAKRRVDYI 136

Query: 296 YQVLMKSGVSEDRIS------------KISGFAHHRLKI 322
            Q+ +  G     I              +SG   +RL  
Sbjct: 137 TQLAVDQGFPASGIKEEVYFKQNHIPQSVSGR-EYRLVA 174


>gi|320537355|ref|ZP_08037310.1| hypothetical protein HMPREF9554_02056 [Treponema phagedenis F0421]
 gi|320145820|gb|EFW37481.1| hypothetical protein HMPREF9554_02056 [Treponema phagedenis F0421]
          Length = 320

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 6/163 (3%)

Query: 43  VLMAFFLVMWIIN------ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96
            L+  F+V++ +N        +    K I    N   +    AS  + +     E+    
Sbjct: 25  ALILLFIVLFFLNKDNIAAVLEKTQAKDILFSKNQKTEKEKEASDSLPEISIQEEKEESK 84

Query: 97  KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156
                  E       + ++    ++      +      + S Q    KN       + + 
Sbjct: 85  GDGSQEPEEPKPAVREPQVKEPEKQDTKPEQKEVKNQPAKSAQKTDTKNIKKETPSQEQK 144

Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
              ST  +    ++      P  K K  A  +K + +     I
Sbjct: 145 KPSSTVSKPEQTQKRQMPAKPEQKPKTAAQVQKPQPEKRTTTI 187


>gi|207722487|ref|YP_002252923.1| lipoprotein [Ralstonia solanacearum MolK2]
 gi|206587668|emb|CAQ18250.1| lipoprotein [Ralstonia solanacearum MolK2]
          Length = 337

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 10/88 (11%)

Query: 237 FDKSSSIPLPETIVVLQ-----KIGEVLAHSTEVISIRGHTDASPFR----NIARDNWRL 287
           F+   +   P     ++                ++ + G TD              N  L
Sbjct: 218 FESGRADVRPHMGETIRAVCDKWRAHGDRGQHGLLLVIGSTDRVRLSPTSATQYESNVGL 277

Query: 288 SLDRAYSAYQVLMKSGVSEDRISK-ISG 314
           +  RA      L+   +   ++   +SG
Sbjct: 278 ARARAEQVKARLLDCSIPTGQMVTMVSG 305


>gi|111022865|ref|YP_705837.1| hypothetical protein RHA1_ro05902 [Rhodococcus jostii RHA1]
 gi|110822395|gb|ABG97679.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 173

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 4/74 (5%)

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296
           F+  ++     + V ++ +   +      I I  +   S           L+  RA +  
Sbjct: 81  FESGTAELNAVSDVTIKAVAAAMKAGDSKIEIEAYATNSDEAAAEL----LADQRAQAVA 136

Query: 297 QVLMKSGVSEDRIS 310
             L   GV + RIS
Sbjct: 137 NALEAQGVDKGRIS 150


>gi|299069933|emb|CBJ41217.1| conserved membrane protein of unknown function, OmpA-like
           [Ralstonia solanacearum CMR15]
          Length = 336

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 10/88 (11%)

Query: 237 FDKSSSIPLPETIVVLQ-----KIGEVLAHSTEVISIRGHTDASPFR----NIARDNWRL 287
           F+   +   P     ++                ++ + G TD              N  L
Sbjct: 217 FESGRADVRPHMGETIRAVCDKWRAHGDRGQHGLLLVIGSTDRVRLSPTSATQYESNVGL 276

Query: 288 SLDRAYSAYQVLMKSGVSEDRISK-ISG 314
           +  RA      L+   +   ++   +SG
Sbjct: 277 ARARAEQVKARLLDCSIPTGQMVTMVSG 304


>gi|307132707|ref|YP_003884723.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
 gi|306530236|gb|ADN00167.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
          Length = 558

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 51/178 (28%), Gaps = 8/178 (4%)

Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191
             +   ++      +LT + +           + S     N  +P  S       +   R
Sbjct: 107 AQVQAVKEGNGAVFTLTGERKTALRKSAVQPAQPSAQAGRNPLVPQTSAVAATPTRVSGR 166

Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLP 246
           +    K I +  +G    +             + ISI  +    M     F         
Sbjct: 167 VGSGEKIIVAIDAGHGGQDPGATGPGGLHEKNVTISIARKLRAIMSADPAFKP-VLTRDG 225

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS-AYQVLMKS 302
           +  + +    +V       + +  H DA+P R       W LS  RA S     L + 
Sbjct: 226 DYFISVMGRSDVARKQGANLLVSIHADAAPNRGATGASVWVLSNRRANSEMANWLEQH 283


>gi|120611653|ref|YP_971331.1| hypothetical protein Aave_2990 [Acidovorax citrulli AAC00-1]
 gi|120590117|gb|ABM33557.1| protein of unknown function DUF748 [Acidovorax citrulli AAC00-1]
          Length = 1295

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 4/36 (11%)

Query: 286  RLSLDRAYSAYQVLMKSGVSEDRIS----KISGFAH 317
             L+  RA +    L + GV  +R+     ++     
Sbjct: 1247 ELAQARAVAVRDELARRGVPLERLFVAAPRVDARGE 1282


>gi|110680885|ref|YP_683892.1| hypothetical protein RD1_3736 [Roseobacter denitrificans OCh 114]
 gi|109457001|gb|ABG33206.1| hypothetical protein RD1_3736 [Roseobacter denitrificans OCh 114]
          Length = 2457

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 2/89 (2%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFR 278
                 +    +    +    +S   P          ++L+  + + ++I G        
Sbjct: 541 YTDYARVPGHIRDKEALTASKTSDWQPGARAFDVAYADILSRINPKDVTITGTASWDGDD 600

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           + A+ NW+LS  RA      L++      
Sbjct: 601 SKAQYNWKLSQRRAEGMR-ALIEDRFPPS 628


>gi|255036260|ref|YP_003086881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
           fermentans DSM 18053]
 gi|254949016|gb|ACT93716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
           fermentans DSM 18053]
          Length = 774

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 18/287 (6%)

Query: 52  WIINATDDDTK--KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109
           + +    +  K   A+       GK     +           R  Q   D     +  K 
Sbjct: 389 YALQEAPEQWKLVAALADSTLRTGKWDYQRAVSADWSTVTLFRIEQRPYDALSFLNYVKR 448

Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169
               +    + +  ++R   +   L+ S       +    + E    + +  +       
Sbjct: 449 KQTPRPKDASPEVVFRRHYTDY--LTESLMEYERDHLEETNPEFRSLMNEIREGVLLSQI 506

Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-I 228
            E         +        +R ++        L+ +V     + +             +
Sbjct: 507 MEEQVWQRSLSDSTGQRSFYERNKERYNYPERALATIVTAKDTQTLNSVRKSLATSPYKL 566

Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287
             +    +F  +S     E +  L  +  ++  + + +  I G+  A             
Sbjct: 567 ERKSKELLFPVNSVEIGNEQLDALTDLYIIMQKNADYVVEIAGYRSADEPEIT------- 619

Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
           S  R  +  + L    +   RI +   +   R   +++P    NRR+
Sbjct: 620 SSTRVRNVVKYLNARNIPILRIIE-KDYGSFR--QSAEPE--RNRRV 661


>gi|255693407|ref|ZP_05417082.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
 gi|260620791|gb|EEX43662.1| OmpA family protein [Bacteroides finegoldii DSM 17565]
          Length = 378

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 191 RLQDLAKKISSTL--SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
           +L D  K+    +  + ++   + +    +     ++       +   F + SS      
Sbjct: 231 QLSDSRKQTEEAVGRADMLQKQLAECQNKKPVIETVIEKAKTLESIVTFRQGSSKVDVSQ 290

Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306
           +  +++I   +    E   + +G++           N R++  RA S   +L K   ++ 
Sbjct: 291 LPNVERIASYMNRHPESKVVIKGYSSPE---GSIEVNERIARARAESVKSILTKKYRIAA 347

Query: 307 DRISK-ISGFAH 317
            RI+    G   
Sbjct: 348 SRITAEGQGIGD 359


>gi|15644709|ref|NP_206879.1| outer membrane protein (omp3) [Helicobacter pylori 26695]
 gi|2313160|gb|AAD07150.1| outer membrane protein (omp3) [Helicobacter pylori 26695]
          Length = 595

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 4/166 (2%)

Query: 49  LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108
           +++  +NATD +T  A+++  + FG              +P ++  Q     +      +
Sbjct: 18  VLLGSMNATDLETYAALQKSSHVFGNYAEKDKDSKLTSDSPTQQQDQKVAQNTASNDSQE 77

Query: 109 NSVDLKIGSTNQKKQYQRLEN----NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164
            +      ST+              +      +Q+ E    ++    +  K        +
Sbjct: 78  ATTLENTASTDNTTATTDETYTKSTDTTVAGAAQKVETDNTAVQSAEQTLKTDVAKVQAD 137

Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210
            S    +          +  A K  ++ +        TL+  + D 
Sbjct: 138 ASAKDFDETTFQADQAAEQTAEKALQQAESKLNTDQQTLNTALQDQ 183


>gi|148553076|ref|YP_001260658.1| hypothetical protein Swit_0149 [Sphingomonas wittichii RW1]
 gi|148498266|gb|ABQ66520.1| conserved hypothetical protein 341 [Sphingomonas wittichii RW1]
          Length = 531

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 70/305 (22%), Gaps = 16/305 (5%)

Query: 15  IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74
            ++ +        ++  SW   +     +L   F+ M I      +         N    
Sbjct: 219 TVMARYYGFGHHLSSQQSWTQTF-----ILFFVFVAMAIPLGISLERIAGEAVTTNRVRS 273

Query: 75  NLMTA-SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133
            L           Q   + ++Q     S+       +  +     + ++Q  R       
Sbjct: 274 FLSKQFGAEARVTQLEIDFAAQPLSVRSVIIAPRNGARPVGTLQADLERQLDRPVQLRLD 333

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
                      +       + +          S   +       +  ++I   + ++R  
Sbjct: 334 QVLLDPRAGAIDVQREQLRQAEHSAAMETNRISAVSQALAVSAGVDIDQITIDREQRRAT 393

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253
             A ++             +        T  ++       +  F        P     L 
Sbjct: 394 VNAAQLPGATIETYHALEKRAAAQAEGWTIAIVPPQGALPSIGFVDGGDALDPAGQAALS 453

Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS--EDRISK 311
                                 P    AR N  L   RA +   +L   G+     R   
Sbjct: 454 TSAWAARR---WNVPALGVPGLPRLPSARPN--LVERRAQAVAALLRAQGIEAVPAR--- 505

Query: 312 ISGFA 316
            +G  
Sbjct: 506 TTGRG 510


>gi|83310386|ref|YP_420650.1| lysophospholipase [Magnetospirillum magneticum AMB-1]
 gi|82945227|dbj|BAE50091.1| Lysophospholipase [Magnetospirillum magneticum AMB-1]
          Length = 420

 Score = 38.0 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 59/241 (24%), Gaps = 1/241 (0%)

Query: 70  NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129
            P     +     +   + P +     K+           + +       +  +  ++  
Sbjct: 158 KPEIAADVPPPAKVEAPKAPAKAIETPKVPEPPKVVEVPKAPEPVKVEAPKAPEPVKVVE 217

Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189
                   +  E  K      + +     +       +       + P+   +       
Sbjct: 218 APKAPEPVKIPEPVKVVEAPKAPEPPAAVQFAKAPPPVAPVAPTPVVPVPVVQAPVAPPL 277

Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249
                        +        +  +                  T  F   SS       
Sbjct: 278 PVAPPPVVVAPPPVVAPAPLPQIAALPPAAPAPVAAPVRKGDNLTVPFATDSSHLPETVR 337

Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
           + L ++ + +      ++++    A+     A    RLSL RA    + LM+ GV   RI
Sbjct: 338 IELDRLAQRMDKDEN-LNLQLLAYAAGDEANASKARRLSLSRALEVRKYLMEMGVRSTRI 396

Query: 310 S 310
            
Sbjct: 397 E 397


>gi|169838279|ref|ZP_02871467.1| hypothetical protein cdivTM_14466 [candidate division TM7
           single-cell isolate TM7a]
          Length = 36

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%), Gaps = 2/29 (6%)

Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDI 336
            +  G        ++D       NRRI++
Sbjct: 4   IETKGNGDLNPVASNDTEEGRAANRRIEV 32


>gi|332829096|gb|EGK01760.1| hypothetical protein HMPREF9455_01908 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 832

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%)

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
              ++I          F+ +      +   VL            ++       ++     
Sbjct: 526 YNTMVIYPKFATGKSTFNINYRDNKEQADKVLNTYRTFSGEGKLLMDSVIIRVSTALDGS 585

Query: 281 ARDNWRLSLDRAYSAYQVLMKS 302
             DN  LS+ RA +     +KS
Sbjct: 586 YDDNIELSMKRANALKDYFIKS 607


>gi|37528403|ref|NP_931748.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36787841|emb|CAE16956.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 419

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 27/284 (9%)

Query: 33  WKIVYADFMTVLMAFFLVMWIINATDDDTKK----AIEQYFNPFGKNLMTASKGIFDEQN 88
           W+I +     ++   F++M  +  T           +    N     ++ +         
Sbjct: 5   WQISF----MIMCWLFIMMSSLVVTTAAAATLSNIHVSNSINESKVTMVFSGGRPNYSFF 60

Query: 89  PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148
           P     +  +D+   E I    ++L      +K +  +  +        + +   K +  
Sbjct: 61  PLHSPERLVVDIHQSEKIVGLPMNLPEQDLVRKIRSSQAPDRQKKRIVFELNNKVKVNSI 120

Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS------- 201
                 +     T     +   ++ F      +         +L+   + +         
Sbjct: 121 VQQLDSEYRVIFTLRASGVPTGKSVFRESSQADTGKLSLTNSKLRTTKQAVLQTTSKGGQ 180

Query: 202 -----TLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIVV 251
                  +G    +             + IS+  +     RN PMF         +  + 
Sbjct: 181 RVVVAIDAGHGGQDPGAIGQRGLKEKNVTISVARKLEVLLRNDPMFKP-VLTRNGDYFIS 239

Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS 294
           +    EV    +  + I  H DA+P R+      W LS  RA S
Sbjct: 240 VAGRSEVARKHSANMLISIHADAAPNRSARGASVWVLSNKRANS 283


>gi|255008993|ref|ZP_05281119.1| hypothetical protein Bfra3_07622 [Bacteroides fragilis 3_1_12]
          Length = 483

 Score = 37.6 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  +  +  +     
Sbjct: 236 FKVTGYASPE---GNYNRNMKLSENRALALVGYLRNRGGVDRSLLTVDWKGE 284


>gi|188026360|ref|ZP_02961803.2| hypothetical protein PROSTU_03872 [Providencia stuartii ATCC 25827]
 gi|188020100|gb|EDU58140.1| hypothetical protein PROSTU_03872 [Providencia stuartii ATCC 25827]
          Length = 410

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 51/174 (29%), Gaps = 2/174 (1%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
           KQ       +F LS+ Q       + T    +  +        K  ++ +   + P   +
Sbjct: 107 KQVAGQYQVVFTLSSGQSRAPTSFNNTTQPMQVPNNAVQDKPLKMNSQAQRPAVAPAPVK 166

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
               M +  +   +A           A         + T +            PMF  + 
Sbjct: 167 TNKTMPKGAKQVVIAIDAGHGGKDPGAIGKNGYREKDVTLSVARKLYAKLEADPMFKPA- 225

Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS 294
                +  + +    +V       + +  H D++P  +      W LS  RA S
Sbjct: 226 MTRDGDYFISVSGRSDVARKKGANMLVSIHADSAPNSSARGASVWVLSNRRANS 279


>gi|253991556|ref|YP_003042912.1| N-acetylmuramoyl-L-alanine amidase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638434|emb|CAR67056.1| n-acetylmuramoyl-l-alanine amidase amib (ec 3.5.1.28) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253783006|emb|CAQ86171.1| N-acetylmuramoyl-L-alanine amidase [Photorhabdus asymbiotica]
          Length = 433

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 81/287 (28%), Gaps = 33/287 (11%)

Query: 33  WKIVYADFMTVLMA--FFLVMWII----------------NATDDDTKKAIEQYFNPFGK 74
           W+I +      +M    F++M  +                N+  +     +     P   
Sbjct: 19  WQISF------MMICSLFIIMNSLMVTTAIAATLSNIHVSNSISEAKVTMVFSDGRPDYS 72

Query: 75  NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134
                S            +          + + +     +     QKK+     N+   +
Sbjct: 73  FFPLHSPERLVVDIHQSGNIIGLPMSLPGQDLVRKIRSSQP-PVPQKKRIVLELNHKVKV 131

Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194
           ++  Q    +  +            +    +S     +  LP  +K         +R+  
Sbjct: 132 NSIVQQSGSEYRVIFTLRASDISVSNPVFRESSQVAASKPLPTNNKLPATKKAVPQRVPK 191

Query: 195 LAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPET 248
             +++   +           +         + IS+  +     RN PMF         + 
Sbjct: 192 GGQQVVVAIDAGHGGQDPGAIGQRGLKEKEVTISVARKLEALLRNDPMFKP-VLTRDGDY 250

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS 294
            + +    EV    +  + +  H DA+P R+      W LS  RA S
Sbjct: 251 FISVAGRSEVARKHSANMLVSIHADAAPNRSARGASVWVLSNKRANS 297


>gi|313146734|ref|ZP_07808927.1| outer membrane protein [Bacteroides fragilis 3_1_12]
 gi|313135501|gb|EFR52861.1| outer membrane protein [Bacteroides fragilis 3_1_12]
          Length = 486

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 3/52 (5%)

Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
             + G+            N +LS +RA +    L   G  +  +  +     
Sbjct: 239 FKVTGYASPE---GNYNRNMKLSENRALALVGYLRNRGGVDRSLLTVDWKGE 287


>gi|118580729|ref|YP_901979.1| hypothetical protein Ppro_2314 [Pelobacter propionicus DSM 2379]
 gi|118503439|gb|ABK99921.1| protein of unknown function DUF748 [Pelobacter propionicus DSM 2379]
          Length = 1189

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 64/198 (32%), Gaps = 36/198 (18%)

Query: 116  GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175
            G+     Q+ +  + +      +     K    R + K +        + +    +    
Sbjct: 998  GADLSTIQFSQGASALSQNEEQKLGALAKALADRPALKMELKGYVDREKDAEGYRKELLA 1057

Query: 176  PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235
              ++ E+ L++ ++++ +D+   +++ +        +K V  +                 
Sbjct: 1058 RKIANERALSLAKQRKSEDMTSALNAAMQPEEYSRYLKAVYRKEKFPKPR---------T 1108

Query: 236  MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL---SLDRA 292
            MF     +P  E   ++                          N A  N  L   + +R+
Sbjct: 1109 MFGLVKDLPDEEMKKLI------------------------IANTAVGNQDLQSLAQERS 1144

Query: 293  YSAYQVLMKSGVSEDRIS 310
             +    L+K GV+++R+ 
Sbjct: 1145 AAVMAYLVKQGVAQERLF 1162


>gi|228952532|ref|ZP_04114609.1| Excalibur domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228807143|gb|EEM53685.1| Excalibur domain protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 287

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 7/148 (4%)

Query: 40  FMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP-PERSSQ 95
           F T+   L  FFLV+ I++      K  + +        L      +     P  E+++ 
Sbjct: 68  FSTLSFILFIFFLVLAILSVI---KKTGVAKKQFIITAVLFVIFVVLLGISAPSSEKTTA 124

Query: 96  NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
               ++ +    K+S   K     +  +  + + +   L+  Q  +        D +  K
Sbjct: 125 TSTKVASNNEEPKDSEQKKELEKKEADEKTQKQEDEKRLAEEQARKQEDEKRQADEQARK 184

Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKI 183
              +         +++       + E+ 
Sbjct: 185 QQEEQKRQADEQARKQQEEQKRQADEQA 212


>gi|330821927|ref|YP_004350789.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3]
 gi|327373922|gb|AEA65277.1| hypothetical protein bgla_2g28610 [Burkholderia gladioli BSR3]
          Length = 1340

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 6/65 (9%)

Query: 249  IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
               L  + + L  +    ++  H  A            L+  RA +  Q L    V   R
Sbjct: 1260 PRNLIGMQKTLPDADMKAALEAHAPADDAALR-----ELAQQRAQAVRQYL-DGKVDASR 1313

Query: 309  ISKIS 313
            +  ++
Sbjct: 1314 MFIVA 1318


>gi|153832616|ref|ZP_01985283.1| OmpA family protein [Vibrio harveyi HY01]
 gi|148871182|gb|EDL70060.1| OmpA family protein [Vibrio harveyi HY01]
          Length = 331

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            N+P++    +    +    L ++   +A      + + G  D+ P       N RL+ +
Sbjct: 223 ENSPVYSYDDASLNLQMETQLMQMASRIAELESYEVVVTGGADSKPAY--LEHNTRLAEE 280

Query: 291 RAYSAYQVLMKSGVSEDRI 309
           RA      L+  GV  + I
Sbjct: 281 RAKVVADFLILHGVKAENI 299


>gi|126729350|ref|ZP_01745164.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic components [Sagittula stellata E-37]
 gi|126710340|gb|EBA09392.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic components [Sagittula stellata E-37]
          Length = 556

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 23/131 (17%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIA---RDN----- 284
             F+  S+    E      +    LA +    +I++ GH+D   F        DN     
Sbjct: 416 VYFEPDSTTFPIELYASDFEEILRLASTYSGAIITVEGHSDPLHFLRREQDGADNAELRA 475

Query: 285 -----WRLSLDRAYSAYQVLMKS----GVSEDR-ISKISGFAHHRLKI---ASDPMNSAN 331
                  LSLDRA +    L +     GV  +R    + G            ++     N
Sbjct: 476 IRTSTQNLSLDRAIAVVDALTQYAADLGVKMNRDQFTVDGVGISSPLHNPPKTEAEWREN 535

Query: 332 RRIDILVEDRQ 342
            R+   V   Q
Sbjct: 536 MRVVFRVLTVQ 546


>gi|330999160|ref|ZP_08322879.1| pseudouridine synthase B, ribosomal large subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329575360|gb|EGG56904.1| pseudouridine synthase B, ribosomal large subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 313

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 6/78 (7%)

Query: 259 LAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315
           L        I   T              N  LS  R     ++    G+   R+ ++  +
Sbjct: 165 LKGIKLDDGIAKFTTLEEGGGKGFNRWYNVTLSEGRNREVRRMFEAVGLPVSRLIRVK-Y 223

Query: 316 AHHRLKIASDPMNSANRR 333
            +  L   SD      RR
Sbjct: 224 GNLEL--PSDLPRGKTRR 239


>gi|238764689|ref|ZP_04625633.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia kristensenii ATCC
           33638]
 gi|238697085|gb|EEP89858.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia kristensenii ATCC
           33638]
          Length = 613

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 53/196 (27%), Gaps = 5/196 (2%)

Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159
                  T +  +  +  TN               + S+ +     S+ ++    K    
Sbjct: 126 PVRQTQPTLSQNNAPLNQTNTPSPNAGRLTAPATNAESRITSANTTSVAKNPFNNKPTVV 185

Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            +    + N          +     A   +  +   A         +  + + +  +   
Sbjct: 186 VSSENITTNTARPIKTARQTNTASAANSSRVVVAIDAGHGGQDPGAIGQNGLQEKSVTIA 245

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
               +   +      PMF         +  + +    +V       + +  H DA+P R+
Sbjct: 246 IARRLEALLNSD---PMFKP-VLTRNGDYFISVMGRSDVARKQGANVLVSIHADAAPNRS 301

Query: 280 IA-RDNWRLSLDRAYS 294
                 W LS  RA S
Sbjct: 302 ATGASVWVLSNRRANS 317


>gi|302526469|ref|ZP_07278811.1| predicted protein [Streptomyces sp. AA4]
 gi|302435364|gb|EFL07180.1| predicted protein [Streptomyces sp. AA4]
          Length = 193

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 43/174 (24%), Gaps = 4/174 (2%)

Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197
           Q++                 C S     S   + +      S          +       
Sbjct: 2   QRALVKAVVGAAAVVALVSACGSGGSNDSSGSKASGQNTAQSSAAAQPSGANQSGDAGQN 61

Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257
             S        +                I    Q +   F+   +    +    L  I +
Sbjct: 62  GASGQNGASGQNGAPGQGGPAAQAVTAAIQQASQASPIKFEPEKAELTGKAKEGLSAIAK 121

Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311
            +  +   + +  H         A    +LS +RA +    L   GV++DRI  
Sbjct: 122 AMQGNDVKLKVETHA----GYPDAEKAKKLSEERAQAIASALEADGVAKDRIQS 171


>gi|156976027|ref|YP_001446933.1| hypothetical protein VIBHAR_04797 [Vibrio harveyi ATCC BAA-1116]
 gi|156527621|gb|ABU72706.1| hypothetical protein VIBHAR_04797 [Vibrio harveyi ATCC BAA-1116]
          Length = 330

 Score = 37.6 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290
            N+P++    +    +    L ++   +A      + + G  D+ P       N RL+ +
Sbjct: 223 ENSPVYSYDDASLNLQMETQLMQMASRIAELESYEVVVTGGADSKPAY--LEHNTRLAEE 280

Query: 291 RAYSAYQVLMKSGVSEDRI 309
           RA      L+  GV  + I
Sbjct: 281 RAKVVADFLILHGVKAENI 299


>gi|144897928|emb|CAM74792.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 195

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSL 289
           Q  +  F+  +++   +    + ++  +   +  V+ + G   +              S 
Sbjct: 97  QVASVQFESGAALSRAD-KAAIGEVVRLYKQTKGVVRVVGFAPSPRQGGYQLIGGLDASQ 155

Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHH 318
           DRA +  + L + G+   +I  ++  A +
Sbjct: 156 DRADAVARELNRRGIPASKIM-VAAMAEY 183


>gi|119898052|ref|YP_933265.1| hypothetical protein azo1761 [Azoarcus sp. BH72]
 gi|119670465|emb|CAL94378.1| hypothetical protein azo1761 [Azoarcus sp. BH72]
          Length = 1201

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 286  RLSLDRAYSAYQVLMKSGVSEDRIS 310
            +L+  RA +  + L   GV+ +RI+
Sbjct: 1155 QLAERRAQAVREFLAARGVAAERIT 1179


>gi|329954711|ref|ZP_08295771.1| hypothetical protein HMPREF9445_00605 [Bacteroides clarus YIT
           12056]
 gi|328527252|gb|EGF54256.1| hypothetical protein HMPREF9445_00605 [Bacteroides clarus YIT
           12056]
          Length = 558

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 11/131 (8%)

Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AH 261
           +    A    K V    T     + +  + +  M D            + +   + L   
Sbjct: 19  IYSQEARETKKEVFSADTEQKTELVLHFRFDRSMVDYGYRDNNRILAAMHKIFADSLCVS 78

Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--GVSEDRISKISGFAHH- 318
             + + I+  +        A  N RL+L RA +    L+    G+++ RI + S  A   
Sbjct: 79  RIDSVCIQAFSSPE---GDADYNRRLALRRAQAVKGYLVWKYPGLNQYRI-RTSAQAESW 134

Query: 319 ---RLKIASDP 326
              R    +D 
Sbjct: 135 DALRDVALNDT 145


>gi|237711892|ref|ZP_04542373.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454587|gb|EEO60308.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 485

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 31/109 (28%), Gaps = 7/109 (6%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV------LQKIGEVLAHSTEVISIR 269
                   + +    +     F + S   LP           +    E++  +T+V  I 
Sbjct: 173 SIAPEPEPVKVRAETRTARLQFRQDSYNILPGFKNNRAELDTVSNSIELVKKNTDVRIIG 232

Query: 270 GH-TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
            + T  +        N  LS +RA +    + +       +  +     
Sbjct: 233 IYITGYASPEGSMAHNMALSENRAKALADYIRRYDAIAPEMLHVDWKGE 281


>gi|50291335|ref|XP_448100.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74690810|sp|Q6FNU4|SEC31_CANGA RecName: Full=Protein transport protein SEC31
 gi|49527411|emb|CAG61051.1| unnamed protein product [Candida glabrata]
          Length = 1281

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/222 (9%), Positives = 52/222 (23%), Gaps = 5/222 (2%)

Query: 71   PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130
                             +     +       +                   +        
Sbjct: 1055 APPAQQAGIPSAANPYASQIPSKAPVNAPPPMSSKKAPVGPPPMSSRKKAHEGKTLSHEA 1114

Query: 131  IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190
               L +S+  +    +     E       ++  +     +E      +S   + A   ++
Sbjct: 1115 ASVLDSSKPVQTQPIASELSREPAPVPTSASQTQVPPPVQETPARNTISPIDMAAPAVEQ 1174

Query: 191  RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETI 249
             +    + I    S      + +            +   D+R   +F     ++    T+
Sbjct: 1175 GISAAQQPIRDFFSSE----LARVTPLTPKEYNKQLKDCDKRLKILFTHLEKNLLSQPTV 1230

Query: 250  VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291
              L  I E+L       ++  H D +        NW   + R
Sbjct: 1231 DKLLHIIELLKEKKYHEAMEVHKDIATNHAEEGGNWLTGVKR 1272


>gi|167948760|ref|ZP_02535834.1| hypothetical protein Epers_20428 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 37

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309
               N +L+  RA S  Q L+ +GV  +RI
Sbjct: 3   SPSYNQQLAQLRAESLVQRLLAAGVDAERI 32


>gi|313157833|gb|EFR57244.1| putative lipoprotein [Alistipes sp. HGB5]
          Length = 551

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 7/102 (6%)

Query: 226 ISIIDQRNTPMFDKSSSIP------LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
           +++ D+     F   + +         +   +   I +++      +     T AS    
Sbjct: 269 VTVEDRNYIQFFVGDTRVVDTLGDNRQQLDKITGLIRQIVEQQEFWVDTITLTAASSPEG 328

Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320
               N RLS  RA +  + L++  G S D +  +   A +  
Sbjct: 329 AYAFNDRLSQGRAQALKRYLVRRYGRSIDTMLIVRWVAENWP 370


>gi|312211565|emb|CBX91650.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1264

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 41/150 (27%)

Query: 52  WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111
           + ++  D    KA+     P   +  T  +      +  E  +        D  I   + 
Sbjct: 588 FAMSEQDLQQFKALAIESQPHHSHGPTTERYGLGVSDQQEIPNGPSSAAPPDASIDTTAG 647

Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171
             +  STNQ      +  +   + + + +E  +       +    L         I++  
Sbjct: 648 ARQSRSTNQLDLGDDMYFDDGLIGDQEDAEPAEFDENVFDDPEGPLYDRKVKFSDIDEAS 707

Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISS 201
                  +         +     L+K +  
Sbjct: 708 QALPSHPNPVMNSETGYEADDDTLSKHLGK 737


>gi|332826484|gb|EGJ99313.1| hypothetical protein HMPREF9455_00346 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 763

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 3/103 (2%)

Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277
               + + I         +F+        +   ++             +     T ++  
Sbjct: 460 RNMYSLLTIYPKFATGKAVFNVRHENNRMQIDTLMSTYNVFTKEKGLDMDSVVMTASTAL 519

Query: 278 RNIARDNWRLSLDRAYSAYQVLMK---SGVSEDRISKISGFAH 317
                +N  LS  R  +    L+K    G+  + I KI     
Sbjct: 520 DGSFDNNAYLSKQRVEAIKDHLIKTYGGGIDVENIFKIRYTGE 562


>gi|124265360|ref|YP_001019364.1| outer membrane protein [Methylibium petroleiphilum PM1]
 gi|124258135|gb|ABM93129.1| outer membrane protein [Methylibium petroleiphilum PM1]
          Length = 182

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 29/120 (24%), Gaps = 11/120 (9%)

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                 + D +    +   +     + +        FD   +   P    VL +      
Sbjct: 58  EAQRLRLRDALKGTPVVVDSTGDHRLRVEVPTKHA-FDPQRTAVKPALAAVLDQFATGFK 116

Query: 261 HSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS---KISGFA 316
                  ++ G                   DRA S    L+  GV   RI    +  G  
Sbjct: 117 PHAATTELQIGAPADDKVSGRIV------QDRAASVRDYLVGRGVPISRIVGLGRAEGAG 170


>gi|317474967|ref|ZP_07934236.1| hypothetical protein HMPREF1016_01215 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316908870|gb|EFV30555.1| hypothetical protein HMPREF1016_01215 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 493

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 31/109 (28%), Gaps = 7/109 (6%)

Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV------LQKIGEVLAHSTEVISIR 269
                   + +    +     F + S   LP           +    E++  +T+V  I 
Sbjct: 181 SIAPEPEPVKVRAETRTARLQFRQDSYNILPGFKNNRAELDTVSNSIELVKKNTDVRIIG 240

Query: 270 GH-TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317
            + T  +        N  LS +RA +    + +       +  +     
Sbjct: 241 IYITGYASPEGSMAHNMALSENRAKALADYIRRYDAIAPEMLHVDWKGE 289


>gi|124265295|ref|YP_001019299.1| outer membrane related peptidoglycan-associated lipoprotein
           [Methylibium petroleiphilum PM1]
 gi|124258070|gb|ABM93064.1| outer membrane related peptidoglycan-associated lipoprotein
           [Methylibium petroleiphilum PM1]
          Length = 214

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 11/110 (10%)

Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291
            T  F    ++     +V L K  + +  + +   +  G  DA      A  N  L+  R
Sbjct: 114 GTVYFAVGQAVLPDGALVALDKAIQAVKDAPQQRVVLSGFHDA---SGAAALNAELAKAR 170

Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340
           A +    L+  GV   RI+        +  +   D      RR++I + +
Sbjct: 171 AKAVRAALVAEGVDAARIAL------RKPDVTLGDGAAPEARRVEIRLVE 214


>gi|113476334|ref|YP_722395.1| hypothetical protein Tery_2738 [Trichodesmium erythraeum IMS101]
 gi|110167382|gb|ABG51922.1| hypothetical protein Tery_2738 [Trichodesmium erythraeum IMS101]
          Length = 281

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 36/186 (19%)

Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245
             +  +LQ         L           +  +   +  +I I D ++   F+  S+   
Sbjct: 88  QNQVTQLQGKLTTSKKELEQKSNRVTELVIEIDKLNSPPVIVIRDLKSRR-FESGSAKIS 146

Query: 246 PETIVVLQ-----KIGEVLAHSTEVI-SIRGHTDASPFRNI------------------- 280
            +    ++     +I          I  + GHTD    +                     
Sbjct: 147 GKLKGFIESDLVKQIENFAKEYQGYIVEVIGHTDGQINQGSVSNLDTQLEQVTKGNGSVS 206

Query: 281 ---ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN------ 331
              A  N  L L RA +  Q L  +   ++   +   ++  +L  ++      N      
Sbjct: 207 ILAAGSNADLGLMRALAVVQKLQNNSRLQELGLQFRAYSAAQLYNSTGDYAEVNRNPDQS 266

Query: 332 -RRIDI 336
            RRI++
Sbjct: 267 RRRIEV 272


>gi|241589621|ref|YP_002979646.1| hypothetical protein Rpic12D_4757 [Ralstonia pickettii 12D]
 gi|240868333|gb|ACS65992.1| hypothetical protein Rpic12D_4757 [Ralstonia pickettii 12D]
          Length = 506

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 58/200 (29%), Gaps = 10/200 (5%)

Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173
            +   ++  + + LE     L  +      +  L R  E            ++ +     
Sbjct: 74  PVIELDEGGRRKLLEPMQEGLYYTVPLIGNRFVLQRGQETAVVEYDGAKSRQNGSVSSLV 133

Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233
                +      +        L +     +   +  N     +             + R 
Sbjct: 134 VRSNEASVSPQTLDPDALYAILQRGRPVHVKQSIQANSYAVPVTGDNAAWATSLPTEDRF 193

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             +F + SS  +        +I E  A     I + G  D S           L+  RA 
Sbjct: 194 DVLFKRGSSTLIVPKKAAAAEILES-ARRAGRIIVTGRDDDSLMET-------LAEKRAG 245

Query: 294 SAYQVLMKSGVSED--RISK 311
           +  + L+K+GV+ +  R++ 
Sbjct: 246 AVKEWLVKNGVAPNVIRLAA 265


>gi|145254698|ref|XP_001398710.1| rho guanyl nucleotide exchange factor [Aspergillus niger CBS 513.88]
 gi|134084293|emb|CAK43180.1| unnamed protein product [Aspergillus niger]
          Length = 1549

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/244 (10%), Positives = 64/244 (26%), Gaps = 6/244 (2%)

Query: 55   NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114
            ++  +  +  +              S       +P + +S  ++        T+     +
Sbjct: 1225 SSISNQPRTDVATPAGQARPQTSHGSGSTVRSTSPAKGNSPTRLPSPTRRSPTRPVTPSR 1284

Query: 115  IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174
              + + K             ++   ++  K      S          +    +N  +   
Sbjct: 1285 KENIDPKMPQTERATRRKGEASVSPTQEAKRRSRATSIPSSRAPGLKERPLQVNGSDARR 1344

Query: 175  LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-----KGVLFETTRTGILISII 229
            L P S +K   M+  +  Q L  +++S         +      + +  E     +  S++
Sbjct: 1345 LQPTSSQKTPKMRL-QSPQKLRDRLNSEKRAQNMAQLGLKDELELIGEELRAMRLTPSLV 1403

Query: 230  DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289
                            P     L      L    E +S   +   +        +  +S 
Sbjct: 1404 RGDGQGSDSLDEPFASPTANSFLVSRVHNLEMKFETLSGEFNGRTAAIEKDLESSLVVSE 1463

Query: 290  DRAY 293
             RA 
Sbjct: 1464 KRAK 1467


>gi|312142930|ref|YP_003994376.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311903581|gb|ADQ14022.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 46

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337
            + L+    + E+R+ +  G      +  ++       NRR++++
Sbjct: 1   MEFLVNNHNIDENRL-QPYGVGPLAPQATNETEEGRQQNRRVELV 44


>gi|303256973|ref|ZP_07342987.1| ribosomal large subunit pseudouridine synthase B [Burkholderiales
           bacterium 1_1_47]
 gi|302860464|gb|EFL83541.1| ribosomal large subunit pseudouridine synthase B [Burkholderiales
           bacterium 1_1_47]
          Length = 355

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 6/90 (6%)

Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSG 303
           +  +  +   ++L        I   T              N  LS  R     ++    G
Sbjct: 195 QGTMSPEAKDKLLKGIKLDDGIAKFTTLEEGGGKGFNRWYNVTLSEGRNREVRRMFEAVG 254

Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRR 333
           +   R+ ++  + +  L   SD      RR
Sbjct: 255 LPVSRLIRVK-YGNLEL--PSDLPRGKTRR 281


>gi|302035659|ref|YP_003795981.1| hypothetical protein NIDE0274 [Candidatus Nitrospira defluvii]
 gi|300603723|emb|CBK40054.1| conserved protein of unknown function [Candidatus Nitrospira
           defluvii]
          Length = 576

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 20/115 (17%)

Query: 236 MFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIRG------HTDASPFRNIARDNWRLS 288
           +F + ++    PE +  +++I  +L    ++  + G       T  +     +  N RLS
Sbjct: 460 LFQQGTATIQSPEQLQGVRRISALLYQLDDMARLSGATVMLEITGQTDVVGRSSRNQRLS 519

Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGF-------AHHRLKIASDPMNSANRRIDI 336
            DRA S  + L          S I+         A     + +  +   +RR+  
Sbjct: 520 EDRARSVLEAL-----HPATFSAITFHARGIGPAAETSPSLGAATL-PQDRRVSF 568


>gi|74318164|ref|YP_315904.1| hypothetical protein Tbd_2146 [Thiobacillus denitrificans ATCC 25259]
 gi|74057659|gb|AAZ98099.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
            25259]
          Length = 1169

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 10/49 (20%)

Query: 286  RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334
             L+  R  +    L+  G+   R++            A     +A++R+
Sbjct: 1108 ELAQARGEAVRAALVAQGLDAGRLA----------VAAPSTQAAADQRV 1146


>gi|259418181|ref|ZP_05742100.1| exopolysaccharide biosynthesis domain protein [Silicibacter sp.
           TrichCH4B]
 gi|259347087|gb|EEW58901.1| exopolysaccharide biosynthesis domain protein [Silicibacter sp.
           TrichCH4B]
          Length = 385

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/249 (10%), Positives = 72/249 (28%), Gaps = 11/249 (4%)

Query: 76  LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN--QKKQYQRLENNIFY 133
           +    + +  +    +   + K D +  +     S   +  S++   + +  +       
Sbjct: 1   MEEGGETLMTDHGFRKFRRRRKRDEAPAKDAVHPSPSDEARSSDVVDQPEPAKPVRPSRP 60

Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193
           +  +Q +   ++      E+ +    +              +   +++   A    +   
Sbjct: 61  VRPAQSARPPQSERPSRPERARAPQTAQPRHAGAKPLNGAQVVTETEQLQPARGEMRHAP 120

Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISII------DQRNTPMFDKSSSIPLPE 247
            + K     ++   +   V           ++  +        +   P+ D   S P   
Sbjct: 121 SVEKPAIEDIAAPQSQKSVALPAALPDPWHVMRQVEITGLNERRSRLPLVDFFRSSPTAR 180

Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVS 305
              +L+        +     +      +P    +    N  LSL R  ++  VLM   + 
Sbjct: 181 AFDLLRTRMLHSLRAHGWKRV-AICGPTPGCGASFTAANLALSLARVPNSRTVLMDMNLR 239

Query: 306 EDRISKISG 314
              I++  G
Sbjct: 240 NPGIARALG 248


>gi|163734749|ref|ZP_02142187.1| hypothetical protein RLO149_15013 [Roseobacter litoralis Och 149]
 gi|161391854|gb|EDQ16185.1| hypothetical protein RLO149_15013 [Roseobacter litoralis Och 149]
          Length = 2457

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 2/89 (2%)

Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFR 278
                 +    +    +    +S   P          ++L+  + + ++I G        
Sbjct: 541 YTDYARVPGHIRDKEALTASKTSDWQPGARAFDVAYTDILSRINPKDVTITGTASWDGDD 600

Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSED 307
           + A+ NW+LS  RA    + L++      
Sbjct: 601 SKAQYNWKLSQRRAEG-LRALIEDRFPPT 628


>gi|83594165|ref|YP_427917.1| hypothetical protein Rru_A2833 [Rhodospirillum rubrum ATCC 11170]
 gi|83577079|gb|ABC23630.1| hypothetical protein Rru_A2833 [Rhodospirillum rubrum ATCC 11170]
          Length = 217

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/188 (9%), Positives = 52/188 (27%), Gaps = 3/188 (1%)

Query: 23  IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82
              +      W + ++D + +L+AFF++++ ++      +               +    
Sbjct: 19  SQGSNAAANLWLVTFSDLVLLLLAFFVMLFAMSPMGGQERGGAVPLRAEAPLATESKPPE 78

Query: 83  IFDEQNPPERSSQNKIDLSI---DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139
                  P R +  +    +        +   D K+  +  +   +          ++  
Sbjct: 79  ESRPATVPPRGAATEYLAVVLRDGLDRVRALRDTKVVLSGDQVLLRPPVALFGEGGDASA 138

Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
                  L R   +   +    +                +  ++      ++L   A+ +
Sbjct: 139 LSELAGFLDRLDNRVILVVFRKEQSGGDPWRGALAEAVDAANRLREAGFGRQLTAQARLV 198

Query: 200 SSTLSGLV 207
           SS  S   
Sbjct: 199 SSAASEGP 206


>gi|332083166|gb|EGI88397.1| N-acetylmuramoyl-L-alanine amidase amiB [Shigella boydii 5216-82]
          Length = 445

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 44/181 (24%), Gaps = 6/181 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
              +           +       +     +       T+  ++     +  +   +    
Sbjct: 126 NADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARAT 185

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                K  +   A         +      +  +       +   + D    PMF      
Sbjct: 186 ANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD---PMFK-GVLT 241

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS-AYQVLMK 301
              +  + +    +V         +  H DA+P R+      W LS  RA S     L +
Sbjct: 242 RDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMANWLEQ 301

Query: 302 S 302
            
Sbjct: 302 H 302


>gi|255533293|ref|YP_003093665.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255346277|gb|ACU05603.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 343

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 6/77 (7%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
             F   S+        +L  + + L  S+    +      + + + +  + +LS  R  S
Sbjct: 238 VSFKSQSTKLATSEETILSSVAQTLRGSSGCKVVV-----TGYCSSSLTDRQLSWRRVES 292

Query: 295 AYQVLM-KSGVSEDRIS 310
             Q L  K G+   R  
Sbjct: 293 VIQYLTEKQGIDGSRFI 309


>gi|194434574|ref|ZP_03066831.1| N-acetylmuramoyl-L-alanine amidase AmiB [Shigella dysenteriae 1012]
 gi|194417159|gb|EDX33271.1| N-acetylmuramoyl-L-alanine amidase AmiB [Shigella dysenteriae 1012]
          Length = 443

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 44/181 (24%), Gaps = 6/181 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
              +           +       +     +       T+  ++     +  +   +    
Sbjct: 124 NADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARAT 183

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                K  +   A         +      +  +       +   + D    PMF      
Sbjct: 184 ANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD---PMFK-GVLT 239

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS-AYQVLMK 301
              +  + +    +V         +  H DA+P R+      W LS  RA S     L +
Sbjct: 240 RDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMANWLEQ 299

Query: 302 S 302
            
Sbjct: 300 H 300


>gi|332083630|gb|EGI88848.1| N-acetylmuramoyl-L-alanine amidase amiB [Shigella dysenteriae
           155-74]
          Length = 436

 Score = 36.9 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 44/181 (24%), Gaps = 6/181 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
              +           +       +     +       T+  ++     +  +   +    
Sbjct: 117 NADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARAT 176

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                K  +   A         +      +  +       +   + D    PMF      
Sbjct: 177 ANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD---PMFK-GVLT 232

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS-AYQVLMK 301
              +  + +    +V         +  H DA+P R+      W LS  RA S     L +
Sbjct: 233 RDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMANWLEQ 292

Query: 302 S 302
            
Sbjct: 293 H 293


>gi|332525840|ref|ZP_08401981.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2]
 gi|332109391|gb|EGJ10314.1| hypothetical protein RBXJA2T_08310 [Rubrivivax benzoatilyticus JA2]
          Length = 1194

 Score = 36.9 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 50/151 (33%), Gaps = 5/151 (3%)

Query: 160  STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219
            +   E ++++         + +  +A     R +  A + ++    L  +   +     +
Sbjct: 1023 APSSEAALDRIAQALKDRPALQTTVAGAADARAEHDAIQAAALEERLRTEQARERARARS 1082

Query: 220  TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279
               G      ++R   +    +   LP+    L  + + +  +     ++          
Sbjct: 1083 VAPGAAAPAAEERERTLRRVYADTRLPDKPRYLIGLAKDIPAAEMERLLKA-----AIPV 1137

Query: 280  IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310
             A     L+L R  +  + L+  G+  +R+ 
Sbjct: 1138 NADVARDLALRRGVAVREALVARGLPAERLF 1168


>gi|320180682|gb|EFW55609.1| N-acetylmuramoyl-L-alanine amidase [Shigella boydii ATCC 9905]
          Length = 444

 Score = 36.9 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 44/181 (24%), Gaps = 6/181 (3%)

Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183
              +           +       +     +       T+  ++     +  +   +    
Sbjct: 125 NADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARAT 184

Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243
                K  +   A         +      +  +       +   + D    PMF      
Sbjct: 185 ANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD---PMFK-GVLT 240

Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYS-AYQVLMK 301
              +  + +    +V         +  H DA+P R+      W LS  RA S     L +
Sbjct: 241 RDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSVTGASVWVLSNRRANSEMANWLEQ 300

Query: 302 S 302
            
Sbjct: 301 H 301


>gi|158336137|ref|YP_001517311.1| outer membrane protein A [Acaryochloris marina MBIC11017]
 gi|158306378|gb|ABW27995.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017]
          Length = 584

 Score = 36.9 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 58/220 (26%), Gaps = 16/220 (7%)

Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166
               V L+    + K     L++ +        S+   +           L   T+  +S
Sbjct: 334 ESGIVVLQTKKQDGKYVISGLKDPLASKPTDLISKTDLDPNKVAFSWEPYLSFDTEFIES 393

Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST----LSGLVADNIVKGVLFETTRT 222
                      +  +       +         I+      L            +      
Sbjct: 394 RVISLLQPPETVELKVDANGAIQASGTAPQSWITEAKQLALRLPNVTQFNTQQIVPVEAG 453

Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---------IRGHTD 273
            +           +F   ++  +P+  V L+ + E +    +            + GHTD
Sbjct: 454 ALADIKAKLEAHTIFFTQNAQLVPQQDVKLKTVAEDIKKLAKTAKTINQTVAVLVEGHTD 513

Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313
                     N  +   RA +   +L K G+ ++    +S
Sbjct: 514 T---SGSELINLYVRETRAKAIISLLSKQGIDKNLFQAVS 550


>gi|257876419|ref|ZP_05656072.1| predicted protein [Enterococcus casseliflavus EC20]
 gi|257810585|gb|EEV39405.1| predicted protein [Enterococcus casseliflavus EC20]
          Length = 1391

 Score = 36.5 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 9/207 (4%)

Query: 41  MTVLMAFFLVMWIINAT---DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNK 97
           M  L+  F  + ++++T        + +              S G     +  +  +Q  
Sbjct: 1   MMKLLTLFSAVLLLSSTGINTTMAFQQVAYAETESLSEGTQQSSGEETNNSADQSETQES 60

Query: 98  IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157
            + S +E  T +       + +Q++  +          +S + E    S     E     
Sbjct: 61  TEQSSEEQTTSSEATDDSTTASQEEVEETEALPEAETPDSSEDEEEPESENEQVEGFDAE 120

Query: 158 CKSTDLEKSINKEE------NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211
             +  L  +   +         F      E        ++   L    +  L+  ++   
Sbjct: 121 AATIQLTVASEAQLRAILLGEPFTDEEGTEYRYEEIANEQSLVLTFASNLALTEPISGIQ 180

Query: 212 VKGVLFETTRTGILISIIDQRNTPMFD 238
              V F +  T +++S     N   F 
Sbjct: 181 RTHVTFRSQETPVIVSQTAAENLMQFA 207


>gi|254460712|ref|ZP_05074128.1| hypothetical protein RB2083_1303 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677301|gb|EDZ41788.1| hypothetical protein RB2083_1303 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 44

 Score = 36.5 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 3/36 (8%)

Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332
           ++  GV  + IS + G+   +    +      +ANR
Sbjct: 1   MIARGVPREAISPV-GYGPSKPLADNATEASRAANR 35


>gi|330991948|ref|ZP_08315897.1| ANK repeat and PH domain-containing protein 1 [Gluconacetobacter
           sp. SXCC-1]
 gi|329760969|gb|EGG77464.1| ANK repeat and PH domain-containing protein 1 [Gluconacetobacter
           sp. SXCC-1]
          Length = 299

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/249 (9%), Positives = 58/249 (23%), Gaps = 4/249 (1%)

Query: 69  FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128
             P     + +     D     E   +              + D+     +     Q   
Sbjct: 45  LGPTRPPELPSPDLREDITADLEAQRELNQRQDAIMGTMPTAADIPPVPGHPVAGSQSAS 104

Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188
                   +       +             +         +     +     +   A+  
Sbjct: 105 LQAADSPPAAAGGATGHGPATPKGARGMSTQPAPARDGNGQLLMPDVTTTVPDHPEAIPA 164

Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248
                  A      + G+   +  +    +     +     D  +   F   S    P  
Sbjct: 165 NLPAIAAAPPALPGVGGISLPDNAQRDGMDLPTYHLA--SPDDGDPVHFLPGSDQIEPGE 222

Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308
             V+        +   +++  G+   +           L++ RA +  ++L+  GV   R
Sbjct: 223 EDVVDATVRQRGNRFVIVNGYGNAATATAEGQTAA-LNLAILRARTLTRLLLARGVPASR 281

Query: 309 IS-KISGFA 316
           I+ +   F 
Sbjct: 282 ITVRAHAFG 290


>gi|317150444|ref|XP_001824027.2| rho guanyl nucleotide exchange factor [Aspergillus oryzae RIB40]
          Length = 1395

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 65/243 (26%), Gaps = 5/243 (2%)

Query: 56   ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLK 114
            + + + +       +            I       +RS S  K                +
Sbjct: 1071 SPEQEERPTTAGSSSDVVTPTKQTRPQISHGSGSTQRSTSPTKSGSPTRMTSPSRRSPTR 1130

Query: 115  IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI--NKEEN 172
              + ++K+      + +   ++ ++      S T+DS++                 +   
Sbjct: 1131 PATPSRKENIDPKLSQVERGTSLRKKGDASVSPTQDSKRRSRATSVPSSRAPGLKERSLP 1190

Query: 173  YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                 + K + L M+  ++L+D  +      S        +  L       + I+   Q 
Sbjct: 1191 VNGASVQKPQKLRMQSPQKLRDRLQNEKKAQSAAQLGLKDELFLIGEELRSLKIAPPQQT 1250

Query: 233  NTPMFDKSSSI--PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 D         P     L      L    + +S   ++  S        +  +S  
Sbjct: 1251 RHARQDSEHLDEPFSPTNNAALVSRVRHLEMRFDTLSSEFNSRTSAIEKDLESSLVVSEK 1310

Query: 291  RAY 293
            RA 
Sbjct: 1311 RAK 1313


>gi|296535657|ref|ZP_06897833.1| OmpA family domain protein [Roseomonas cervicalis ATCC 49957]
 gi|296264008|gb|EFH10457.1| OmpA family domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 137

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 17/113 (15%)

Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293
             F + S+        V+ ++           + + G  D          N  LS  RA 
Sbjct: 34  VFFTEDSAALDEAAQGVVAQVARAAQAQPGAPVQVLGFADPD---GGRAYNQALSAARAE 90

Query: 294 SAYQVLMKSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILVEDRQ 342
           +    L   G++  RI +++             +        RR++I +   Q
Sbjct: 91  NVAAALRAQGIAPARI-RVAPRGPVPFEMMPLES--------RRVEIRIGQEQ 134


>gi|285018292|ref|YP_003376003.1| xsa-associated protein [Xanthomonas albilineans GPE PC73]
 gi|283473510|emb|CBA16013.1| probable xsa-associated protein [Xanthomonas albilineans]
          Length = 280

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 41/150 (27%), Gaps = 17/150 (11%)

Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
           K       +D +                  + A     RL      IS+ L  + A +  
Sbjct: 54  KSPSGTSPSDEKVVDTAAPTQRNERSVGAAVNASHDANRLATYESDISTVLKNISALSQK 113

Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI------ 266
            G   + T   I     D   + +F   S         +L+     L   T+        
Sbjct: 114 YGFSVDATTNTI-----DLGQSGLFPLGSDRLSATQERLLRNYVADLIALTQNDPAMAPL 168

Query: 267 ---SIRGHTDASPFRNIARDNWRLSLDRAY 293
              ++ G+TD          N  LS  R+ 
Sbjct: 169 KSITVVGYTD---PAGSYLFNLDLSARRSE 195


>gi|121715071|ref|XP_001275145.1| nonribosomal peptide synthase, putative [Aspergillus clavatus NRRL 1]
 gi|119403301|gb|EAW13719.1| nonribosomal peptide synthase, putative [Aspergillus clavatus NRRL 1]
          Length = 2511

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 47/196 (23%), Gaps = 23/196 (11%)

Query: 153  KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212
                         +           L  E+        RL    + + +         ++
Sbjct: 1375 PEASPAAEVFKPYADRPIWQTGYTSLELEESGEGDFDLRLSGFLETVRTGFIADQVVKLL 1434

Query: 213  KGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271
              V+  +    +  + I+           S    P    +     E+ A + +  +I   
Sbjct: 1435 DTVISSSGSMSLRDLDIVTDAEALYLHSLSKPVTPTAQFLHHGFEEIAAAAGDRTAIEFF 1494

Query: 272  TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED---------------RISKI-SGF 315
             D+ P      +       RA    + L+ +GV  D                I  I    
Sbjct: 1495 GDSEPVSYAELN------RRANQLARYLIDNGVGPDTLVPLCLPKSVEMISTILAILKAG 1548

Query: 316  AHHRLKIASDPMNSAN 331
                   + +P    N
Sbjct: 1549 GGFVPLDSDNPPERNN 1564


>gi|83772766|dbj|BAE62894.1| unnamed protein product [Aspergillus oryzae]
          Length = 1539

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 65/243 (26%), Gaps = 5/243 (2%)

Query: 56   ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLK 114
            + + + +       +            I       +RS S  K                +
Sbjct: 1215 SPEQEERPTTAGSSSDVVTPTKQTRPQISHGSGSTQRSTSPTKSGSPTRMTSPSRRSPTR 1274

Query: 115  IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI--NKEEN 172
              + ++K+      + +   ++ ++      S T+DS++                 +   
Sbjct: 1275 PATPSRKENIDPKLSQVERGTSLRKKGDASVSPTQDSKRRSRATSVPSSRAPGLKERSLP 1334

Query: 173  YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232
                 + K + L M+  ++L+D  +      S        +  L       + I+   Q 
Sbjct: 1335 VNGASVQKPQKLRMQSPQKLRDRLQNEKKAQSAAQLGLKDELFLIGEELRSLKIAPPQQT 1394

Query: 233  NTPMFDKSSSI--PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290
                 D         P     L      L    + +S   ++  S        +  +S  
Sbjct: 1395 RHARQDSEHLDEPFSPTNNAALVSRVRHLEMRFDTLSSEFNSRTSAIEKDLESSLVVSEK 1454

Query: 291  RAY 293
            RA 
Sbjct: 1455 RAK 1457


>gi|227546440|ref|ZP_03976489.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227213097|gb|EEI80976.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 516

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/191 (8%), Positives = 48/191 (25%), Gaps = 2/191 (1%)

Query: 53  IINATDDDTKKAIEQY--FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110
            +N+     ++   +     P  K+   +     D                         
Sbjct: 236 AMNSVALPKQQTEPESTIVTPASKHSRISGIVPVDAIAHAVVKHAPSTSEPAVASAAVVE 295

Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170
            D   G++   +  Q   N      +       +++     E  ++   +          
Sbjct: 296 SDAAAGASKSAENVQSAPNTRNAGDSQPADTVEQHAEVAQPEAAREAEAAQSENTQPETA 355

Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230
           +       + +    +   ++         +T +G+           ++      I +  
Sbjct: 356 QPATAQSETDQPAADVPDDQQRTAAEAYQEATAAGVADQQPAAETAQQSVSEAYDIGLHA 415

Query: 231 QRNTPMFDKSS 241
             +TP+F+  S
Sbjct: 416 GVHTPVFEPGS 426


>gi|114327747|ref|YP_744904.1| hypothetical protein GbCGDNIH1_1083 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315921|gb|ABI61981.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1]
          Length = 275

 Score = 36.5 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293
             MF    S   P T   L++    ++  +    +     A    +      RLSL RA 
Sbjct: 151 RVMFGPGRSDISPATNDALREAAREVSKLSNES-VTILAYAPGTADDPSTARRLSLSRAL 209

Query: 294 SAYQVLMKSGVSEDRISKISGFAH 317
           +    L+ +G+   +I  +     
Sbjct: 210 TIRSALIAAGMPSTKIF-VRALGS 232


>gi|50122857|ref|YP_052024.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613383|emb|CAG76834.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 556

 Score = 36.5 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 81/294 (27%), Gaps = 32/294 (10%)

Query: 40  FMTVLMAFFLVMWIINA-----TDDDTKKAIEQYFNPFGKNLMTASKG-IFDEQNPPERS 93
            M+ ++  F+ +W++ A      +    K          +   +      F   + P R 
Sbjct: 1   MMSRMVKLFIGIWLLLAGSAWAANLSDIKVDNASGQATVRLSFSGQPIYAFFPLSNPARV 60

Query: 94  SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153
             +     + + +  +     +    +    Q  ++    L  +Q ++    +    +  
Sbjct: 61  VIDIRQTGVIQGLPLDFSGQNLIKRVRTSNAQDAQSLRLVLDLTQAAKTRAVTQKEGAGY 120

Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK------------------RKKRLQDL 195
                 + D  K++           +       K                  R    Q  
Sbjct: 121 VVVFTIAGDKAKTVQASAPPATRQQNSAPAEPAKNPFINKPTVVVNSSSSSTRVPARQSN 180

Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIV 250
            + + +  +G    +             + ISI  +      N P F         +  +
Sbjct: 181 ERIVVAIDAGHGGQDPGAIGTNGLREKNVTISIARKLQTLLNNDPAFK-GVLTRDGDYFI 239

Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS-AYQVLMKS 302
            +    +V       + +  H DA+P RN      W LS  RA S     L + 
Sbjct: 240 SVMGRSDVARKQGANLLVSIHADAAPNRNAKGASVWVLSNRRANSEMANWLEQH 293


>gi|58040834|ref|YP_192798.1| hypothetical protein GOX2411 [Gluconobacter oxydans 621H]
 gi|58003248|gb|AAW62142.1| Hypothetical protein GOX2411 [Gluconobacter oxydans 621H]
          Length = 135

 Score = 36.1 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286
                     FD+ S    P    V+ K         E  S+   + ++     A     
Sbjct: 27  QPSRDSYVVFFDRESVTLSPVAQAVVTKAATA--ARAEHASVVRVSGSAGTNGDAAVLKE 84

Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILV 338
           L+  RA +    L   G++  RI            + S+  +   +  RR+ I +
Sbjct: 85  LATSRAQTVATQLSNDGLNGARI-------EMTPYVPSELEDSHVAL-RRVSITI 131


>gi|261342830|ref|ZP_05970688.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter cancerogenus ATCC
           35316]
 gi|288314872|gb|EFC53810.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter cancerogenus ATCC
           35316]
          Length = 448

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 7/164 (4%)

Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK-KIS 200
                  R +E  ++  KS D   ++    N    P +  +   +   K +  +      
Sbjct: 146 ETPVYTPRPAEPARNPFKSQDDRITVATSSNTVTRPAASARRATVSGDKVIIAIDAGHGG 205

Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260
                +      +  +       +   + D    PMF         +  + +    +V  
Sbjct: 206 QDPGAIGPGGTREKNVTIAIARKLRTLLNDD---PMFK-GVLTRDGDYFISVMGRSDVAR 261

Query: 261 HSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYS-AYQVLMKS 302
                  +  H DA+P R       W LS  RA S     L + 
Sbjct: 262 KQNANFLVSIHADAAPNRDATGASVWVLSNRRANSEMAGWLEQH 305


>gi|71901769|ref|ZP_00683839.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
 gi|71728478|gb|EAO30639.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
          Length = 240

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 61/196 (31%), Gaps = 13/196 (6%)

Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181
            Q     N++    + +++   ++   +   + +   +  +  +   + E        + 
Sbjct: 44  DQLADTRNDLLIEESRREAARARHEAEQLRIQSQIQAEEAERARHTAEAEAIARKNAEQA 103

Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
                ++++    +A++ ++ L+   A+ +        +R    I I     T  +    
Sbjct: 104 LSSVAEKQQANLSVAQQKAAQLAREEAELLSG-AKLPPSRFDERIEIF-TLGTEAYAGGK 161

Query: 242 SIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300
                     +Q + + L       + I G+   +               RA      L+
Sbjct: 162 KRFSSSARAQIQALAQYLKIVKRGGVEIVGYGGDAVVA----------HKRAEVLLDALV 211

Query: 301 KSGVSEDRISKISGFA 316
            +GV  +R    +G  
Sbjct: 212 AAGVPANRFKISNGNG 227


>gi|218709364|ref|YP_002416985.1| hypothetical protein VS_1373 [Vibrio splendidus LGP32]
 gi|218322383|emb|CAV18536.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 218

 Score = 36.1 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 16/116 (13%)

Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252
           ++        + G+      +G+  +       ISI D     +FD +           L
Sbjct: 49  EESQNTRIVIIKGINDKLNAEGIGVQADPETGDISITDS---ILFDLNDYKLKASGQEFL 105

Query: 253 QKIGEVLAHSTEVIS----------IRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298
           +K   + + +               I GH+ +         N  LS+ RA S    
Sbjct: 106 EKFIPIYSDAIFQSQATADEVSRVVIEGHSSSE---GAFDRNMELSVLRANSVIAF 158


>gi|326317114|ref|YP_004234786.1| hypothetical protein Acav_2307 [Acidovorax avenae subsp. avenae ATCC
            19860]
 gi|323373950|gb|ADX46219.1| protein of unknown function DUF748 [Acidovorax avenae subsp. avenae
            ATCC 19860]
          Length = 1314

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 13/28 (46%)

Query: 286  RLSLDRAYSAYQVLMKSGVSEDRISKIS 313
             L+  RA +    L + GV  +R+   +
Sbjct: 1266 ELAQARAVAVRDELARRGVPLERLFVAA 1293


>gi|157147862|ref|YP_001455181.1| N-acetylmuramoyl-l-alanine amidase II [Citrobacter koseri ATCC
           BAA-895]
 gi|157085067|gb|ABV14745.1| hypothetical protein CKO_03666 [Citrobacter koseri ATCC BAA-895]
          Length = 443

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLD 290
            N PMF         +  + +    +V         +  H DA+P RN      W LS  
Sbjct: 230 NNDPMFK-GVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRNATGASVWVLSNR 288

Query: 291 RAYS-AYQVLMKS 302
           RA S     L + 
Sbjct: 289 RANSEMANWLEEH 301


>gi|88797450|ref|ZP_01113039.1| hypothetical protein MED297_09871 [Reinekea sp. MED297]
 gi|88779622|gb|EAR10808.1| hypothetical protein MED297_09871 [Reinekea sp. MED297]
          Length = 290

 Score = 35.7 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 52/168 (30%), Gaps = 5/168 (2%)

Query: 33  WKIVYADFMTVLMAFFLV-MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91
           W++V+A F+ ++  FF+  +W++    +   +       P     +  S        P E
Sbjct: 5   WQVVFAAFLALVFHFFVAGLWLL--LTEPKTEQRVTL--PEPMTTIAVSIAPASTSLPVE 60

Query: 92  RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151
            S  + I  +    + + + +    S ++     +  +        +     +     + 
Sbjct: 61  DSEPSTIVSAEPAQLPQPTPENSETSVDEPIAVSQAVSEPEPEPEPEPEPEPEPEPEPEP 120

Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199
           E   +  ++   E+      +      S         ++ + +     
Sbjct: 121 EPEPEPVENVVPERVPALPSSVQTALASTSVSSEKAIEETVDEPKNNA 168


>gi|283786848|ref|YP_003366713.1| N-acetylmuramoyl-L-alanine amidase [Citrobacter rodentium ICC168]
 gi|282950302|emb|CBG89949.1| N-acetylmuramoyl-L-alanine amidase [Citrobacter rodentium ICC168]
          Length = 442

 Score = 35.7 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292
            PMF         +  + +    +V         +  H DA+P R+      W LS  RA
Sbjct: 233 DPMFK-GVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRA 291

Query: 293 YS-AYQVLMKS 302
            S     L + 
Sbjct: 292 NSEMANWLEEH 302


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.308    0.110    0.304 

Lambda     K      H
   0.267   0.0334    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,961,299,026
Number of Sequences: 14124377
Number of extensions: 87887767
Number of successful extensions: 314880
Number of sequences better than 10.0: 9845
Number of HSP's better than 10.0 without gapping: 7689
Number of HSP's successfully gapped in prelim test: 2156
Number of HSP's that attempted gapping in prelim test: 291245
Number of HSP's gapped (non-prelim): 11869
length of query: 343
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 203
effective length of database: 2,865,380,850
effective search space: 581672312550
effective search space used: 581672312550
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 81 (36.1 bits)